BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014866
(417 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
gi|223541913|gb|EEF43459.1| RNA-binding protein, putative [Ricinus communis]
Length = 379
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/384 (69%), Positives = 297/384 (77%), Gaps = 52/384 (13%)
Query: 81 MAVVESASQDSAVSSAGSIPAS------------NGQDHPKQN-----------GGTMVM 117
MA+VE+AS D +S + +S N QDH N +
Sbjct: 1 MAIVENASVDLGISIGSASSSSSSLDSSVSSASSNDQDHSNHNNSHDHGRSLIENSISIQ 60
Query: 118 P-------------LDQGLYNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLA 164
P L + ++QRS+GGGD +RD+RELQELFSKLNPMAEEFVPPSLA
Sbjct: 61 PLYMKAQVQSPPPNLQVAQLHHHHQRSSGGGDLQRDIRELQELFSKLNPMAEEFVPPSLA 120
Query: 165 K---TNNNNHGVNGFNGGFFANNSLIFNNHN--------ARNGNVNANAAVRRKKSFGQG 213
+NN HG+NG N GF+ NN NN++ +RNG +N +AA RRKK++ QG
Sbjct: 121 NNKISNNYIHGLNGLNVGFYTNN----NNYDPAFMLTNASRNGQLNGSAA-RRKKNYNQG 175
Query: 214 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 273
KRR+NSRTS+AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF
Sbjct: 176 KRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 235
Query: 274 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
AFIEFT EEGARAALNLAGT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMC RTIYC
Sbjct: 236 AFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYC 295
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVL 393
TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVL
Sbjct: 296 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVL 355
Query: 394 GSLPIRVSPSKTPVRPRAPRLPMH 417
GSLPIRVSPSKTPVRPRAPR+PMH
Sbjct: 356 GSLPIRVSPSKTPVRPRAPRIPMH 379
>gi|297742454|emb|CBI34603.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/294 (83%), Positives = 259/294 (88%), Gaps = 19/294 (6%)
Query: 129 QRSNGG-----GDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 183
RSNGG GD DMRELQELFSKLNPMAEEFVPPSLA NG NGGF++N
Sbjct: 118 HRSNGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLAN--------NGLNGGFYSN 169
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 243
S NN RNG VN RRK +FGQGKRRMNSRTS+AQREEIIRRTVYVSDIDQQV
Sbjct: 170 GSETHNN--TRNGQVNG----RRKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQV 223
Query: 244 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 303
TEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVL
Sbjct: 224 TEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVL 283
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
PSKTAIAPVNPTFLPR EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLG
Sbjct: 284 PSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLG 343
Query: 364 DYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
DYHHSTRIAFVEF+MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP+H
Sbjct: 344 DYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397
>gi|359474160|ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
Length = 398
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/294 (83%), Positives = 259/294 (88%), Gaps = 18/294 (6%)
Query: 129 QRSNGG-----GDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 183
RSNGG GD DMRELQELFSKLNPMAEEFVPPSLA NG NGGF++N
Sbjct: 118 HRSNGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLAN--------NGLNGGFYSN 169
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 243
S NN RNG VN R+K +FGQGKRRMNSRTS+AQREEIIRRTVYVSDIDQQV
Sbjct: 170 GSETHNN--TRNGQVNGR---RKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQV 224
Query: 244 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 303
TEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVL
Sbjct: 225 TEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVL 284
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
PSKTAIAPVNPTFLPR EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLG
Sbjct: 285 PSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLG 344
Query: 364 DYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
DYHHSTRIAFVEF+MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP+H
Sbjct: 345 DYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thaliana]
gi|332193408|gb|AEE31529.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 358
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/338 (74%), Positives = 271/338 (80%), Gaps = 20/338 (5%)
Query: 88 SQDSAVSSAGSIPASNGQDHPKQNGGTMVMPLDQGLYNQ---NNQRSNG---GGDFKRDM 141
SQDS VSS + Q+H + V+ DQGLY++ + RS+G G FKRDM
Sbjct: 33 SQDSGVSS-------DDQNH--HSRIDQVLRHDQGLYSKIGSHVARSDGVDGGESFKRDM 83
Query: 142 RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFN--GGFFANNSLIFNNHNARNGNVN 199
RELQELFSKLNPMAEEFVPPSL K N F G FF NN + N
Sbjct: 84 RELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGG---YGN 140
Query: 200 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
N RRKKSFGQGKRRMN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVV
Sbjct: 141 ENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVV 200
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCRICGDPNSVLRFAFIEFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPR
Sbjct: 201 DCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 260
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
TEDEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRIAFVEFVMA
Sbjct: 261 TEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMA 320
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
ESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR PMH
Sbjct: 321 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 358
>gi|15235177|ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pfam: PF00076,
Score=5.5e-23, N=2) [Arabidopsis thaliana]
gi|4539439|emb|CAB40027.1| RNA-binding protein [Arabidopsis thaliana]
gi|4959384|gb|AAD34325.1| RNA-binding protein [Arabidopsis thaliana]
gi|7267758|emb|CAB78184.1| RNA-binding protein [Arabidopsis thaliana]
gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|21592407|gb|AAM64358.1| RNA-binding protein [Arabidopsis thaliana]
gi|332657507|gb|AEE82907.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 336
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/356 (71%), Positives = 277/356 (77%), Gaps = 39/356 (10%)
Query: 81 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 126
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GG-------NGIHDEI 49
Query: 127 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 183
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQ 160
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GAR ALNL+GTMLGFYPV+V
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKV 220
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
+PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQ D+KLFFESVCGEVYRLRLL
Sbjct: 221 MPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLL 280
Query: 363 GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA-PRLPMH 417
GDYHH TRI FVEFVMAESAIAALNCSGV+LGSLPIRVSPSKTPVR RA PR MH
Sbjct: 281 GDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336
>gi|297809287|ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
gi|297318364|gb|EFH48786.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/350 (72%), Positives = 271/350 (77%), Gaps = 27/350 (7%)
Query: 81 MAVVESASQDSAVSSAGSIPA---------SNGQDHPKQNGGTMVMPLDQGLYNQNNQRS 131
MAV+ES ++ V + G I +G +GG + G + RS
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGVSSNNDHGGNEI----HGEIGVHVARS 56
Query: 132 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH 191
+G FKRDMREL EL SKLNPMA+EFVPPSL K VNGFNGGFFA NN
Sbjct: 57 DGDESFKRDMRELHELLSKLNPMAKEFVPPSLTKPV-----VNGFNGGFFA-----VNNG 106
Query: 192 NARNGN--VNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQL 248
GN VN + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQVTEEQL
Sbjct: 107 FGAAGNFPVNEDGGFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQL 166
Query: 249 AALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTA 308
A LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GARAAL+L+GTMLGFYPV+V+PSKTA
Sbjct: 167 AGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARAALSLSGTMLGFYPVKVMPSKTA 226
Query: 309 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 368
IAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQAD+KLFFESVCGEVYRLRLLGDYHH
Sbjct: 227 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQADIKLFFESVCGEVYRLRLLGDYHHP 286
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA-PRLPMH 417
TRI FVEFVMAESAIAALNCSGV+LGSLPIRVSPSKTPVR RA PR MH
Sbjct: 287 TRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAVPRHQMH 336
>gi|1174153|gb|AAA86641.1| RNA-binding protein [Arabidopsis thaliana]
Length = 336
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/356 (70%), Positives = 275/356 (77%), Gaps = 39/356 (10%)
Query: 81 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 126
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GG-------NGIHDEI 49
Query: 127 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 183
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDI QQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIYQQ 160
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GAR ALNL+GTMLGFYPV+V
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKV 220
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
+PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQ D+KLFFESVCGEVYRLRLL
Sbjct: 221 MPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLL 280
Query: 363 GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA-PRLPMH 417
GDYHH TRI FVEFVMAESAI ALNCSGV+LGSLPIRVSPSKTPVR RA PR MH
Sbjct: 281 GDYHHPTRIGFVEFVMAESAIGALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336
>gi|225455232|ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
gi|302143972|emb|CBI23077.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/370 (65%), Positives = 275/370 (74%), Gaps = 42/370 (11%)
Query: 81 MAVVESASQDSAVSSAGSIPASN---GQDHPKQ------------NGGTMVMPLDQGLYN 125
MAVVE+A SSA S A GQ P N +++P D+ Y+
Sbjct: 1 MAVVENAGNKVGSSSANSESADTNDFGQSQPSNHTVMQNLQQKNTNSKPILLPNDENYYS 60
Query: 126 Q------NNQRSNGG------GDFKRD------MRELQELFSKLNPMAEEFVPPSLAKTN 167
Q SNG G F RD +R+L++L SKLNPMAEEFVPPSLA
Sbjct: 61 QKIPQFQQKAGSNGVAKIQMVGSFGRDREDGGDIRDLEDLLSKLNPMAEEFVPPSLA--- 117
Query: 168 NNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQRE 227
N HG + + NN ++ N GN N NA R++ ++ Q KRR+NSRTS+AQRE
Sbjct: 118 -NGHGWSAGAAFGYTNNFVLQANF----GNANGNAGRRKRNNYNQ-KRRINSRTSMAQRE 171
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
E+I+RTVYVSDIDQQVTEE LAALF+ CGQVVDCRICGDPNSVLRFAF+EFTDEEGARAA
Sbjct: 172 EVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 231
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+LAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVTQA+VKL
Sbjct: 232 LSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQAEVKL 291
Query: 348 FFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
FFES+CGEV+RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG +LGSLPIRVSPSKTPV
Sbjct: 292 FFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGAILGSLPIRVSPSKTPV 351
Query: 408 RPRAPRLPMH 417
RPRAPR +H
Sbjct: 352 RPRAPRPALH 361
>gi|79325059|ref|NP_001031614.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|332657508|gb|AEE82908.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 326
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/337 (70%), Positives = 262/337 (77%), Gaps = 38/337 (11%)
Query: 81 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 126
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GG-------NGIHDEI 49
Query: 127 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 183
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQ 160
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE GAR ALNL+GTMLGFYPV+V
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKV 220
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
+PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK+TQ D+KLFFESVCGEVYRLRLL
Sbjct: 221 MPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLL 280
Query: 363 GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR 399
GDYHH TRI FVEFVMAESAIAALNCSGV+LGSLPIR
Sbjct: 281 GDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIR 317
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 318 PRTE--DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVE 375
PRT E+ RT+Y ++ID++VT+ + F G+V R+ GD + R AF+E
Sbjct: 137 PRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGF-GQVVDCRICGDPNSVLRFAFIE 195
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
F A ALN SG +LG P++V PSKT + P P
Sbjct: 196 FTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNP 232
>gi|79319100|ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|332193409|gb|AEE31530.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 406
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/322 (73%), Positives = 255/322 (79%), Gaps = 20/322 (6%)
Query: 88 SQDSAVSSAGSIPASNGQDHPKQNGGTMVMPLDQGLYNQ---NNQRSNG---GGDFKRDM 141
SQDS VSS + Q+H + V+ DQGLY++ + RS+G G FKRDM
Sbjct: 33 SQDSGVSS-------DDQNHHSRID--QVLRHDQGLYSKIGSHVARSDGVDGGESFKRDM 83
Query: 142 RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFN--GGFFANNSLIFNNHNARNGNVN 199
RELQELFSKLNPMAEEFVPPSL K N F G FF NN G N
Sbjct: 84 RELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF---AGTGNGGYGN 140
Query: 200 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
N RRKKSFGQGKRRMN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVV
Sbjct: 141 ENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVV 200
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCRICGDPNSVLRFAFIEFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPR
Sbjct: 201 DCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 260
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
TEDEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRIAFVEFVMA
Sbjct: 261 TEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMA 320
Query: 380 ESAIAALNCSGVVLGSLPIRVS 401
ESAIAALNCSGVVLGSLPIR S
Sbjct: 321 ESAIAALNCSGVVLGSLPIRSS 342
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y +++D++VT+ + F S CG+V R+ GD + R AF+EF E A+ ALN
Sbjct: 173 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 231
Query: 389 SGVVLGSLPIRVSPSKTPVRPRAP 412
SG +LG P++V PSKT + P P
Sbjct: 232 SGTMLGFYPVKVLPSKTAIAPVNP 255
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
gi|223528275|gb|EEF30325.1| RNA-binding protein, putative [Ricinus communis]
Length = 385
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/278 (78%), Positives = 236/278 (84%), Gaps = 9/278 (3%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVN 199
DM +L E+ S LNPMA+EFVPPSL NNHG G NG + NN N GN
Sbjct: 117 DMSDLVEILSNLNPMAKEFVPPSLV----NNHGYLG-NGFGYTNNFPAQTNP----GNAI 167
Query: 200 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
N R+K SF QG+RRMN+RTS+AQRE++IRRTVYVSDIDQQVTEEQLA LFV CGQVV
Sbjct: 168 GNTIKRKKNSFNQGRRRMNTRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFVHCGQVV 227
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCRICGDPNSVLRFAFIEFTDEEGARAALNL+GT+LGFYP+RVLPSKTAIAPVNPTFLPR
Sbjct: 228 DCRICGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGFYPLRVLPSKTAIAPVNPTFLPR 287
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
+EDEREMCART+YCTNIDKKVTQADV+LFFES CGEV RLRLLGDYHHSTRIAFVEF +A
Sbjct: 288 SEDEREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFTVA 347
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
ESAI ALNCSG VLGSLPIRVSPSKTPVRPR PR P+H
Sbjct: 348 ESAILALNCSGAVLGSLPIRVSPSKTPVRPRIPRSPLH 385
>gi|356516140|ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
Length = 378
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 254/324 (78%), Gaps = 7/324 (2%)
Query: 97 GSIPASNGQ-DHPKQNGGTMVMPLDQGLYNQNNQRS--NGGGDFKRDMRELQELFSKLNP 153
G++P N ++ Q G ++ Y N S N G FKRDMR+L+EL SKLNP
Sbjct: 59 GTMPVPNSNYNYNAQMGQMHANGVNNDGYGMNGVMSGENEGESFKRDMRDLEELLSKLNP 118
Query: 154 MAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKSFGQG 213
MAEEFVPPSL+ T+ G G + NN ++ NN GN N RRK + QG
Sbjct: 119 MAEEFVPPSLSNTHGYLAGPGAGAGFGYPNNFILLNNF----GNANGQTNRRRKNGYNQG 174
Query: 214 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 273
KRR+N + + +REE+ RRTVYVSDIDQ VTEEQLAALF+ CGQVVDCR+CGDPNS+LRF
Sbjct: 175 KRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRF 234
Query: 274 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
AFIEFTDEEGARAALNL+GTMLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC+RTIYC
Sbjct: 235 AFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 294
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVL 393
TNIDKK+TQADVK FFES+CGEV RLRLLGDYHHSTRIAFVEF +AESAIAAL+CSGV+L
Sbjct: 295 TNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIAALSCSGVIL 354
Query: 394 GSLPIRVSPSKTPVRPRAPRLPMH 417
GSLPIRVSPSKTPVR RAPR MH
Sbjct: 355 GSLPIRVSPSKTPVRSRAPRPTMH 378
>gi|297851722|ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
gi|297339584|gb|EFH70001.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/318 (72%), Positives = 246/318 (77%), Gaps = 9/318 (2%)
Query: 88 SQDSAVSSAGSIPASNGQDHPKQNGGTMVMPLDQGLYNQNNQRSNGGGDFKRDMRELQEL 147
SQDS VSS S + + G + + G + + +GG FKRDMRELQEL
Sbjct: 33 SQDSGVSSDDQNHHSRIDQVLRHDQGDVGLYSKIGSHVARSDGVDGGESFKRDMRELQEL 92
Query: 148 FSKLNPMAEEFVPPSLAKTNNNNHGVNGFN------GGFFANNSLIFNNHNARNGNVNAN 201
FSKLNPMAEEFVPPSL K N G FF NN + G N N
Sbjct: 93 FSKLNPMAEEFVPPSLTKQGGNGGLNGVNGGFFTSAGSFFRNNGF---SGTGNGGYGNEN 149
Query: 202 AAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDC 261
RRKKSFGQGKRRMN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVVDC
Sbjct: 150 GGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDC 209
Query: 262 RICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 321
RICGDPNSVLRFAFIEFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPRTE
Sbjct: 210 RICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTE 269
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES 381
DEREMCARTIYCTNIDKKVTQ+DVK+FFES CGEVYRLRLLGDY HSTRIAFVEFVMAES
Sbjct: 270 DEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAES 329
Query: 382 AIAALNCSGVVLGSLPIR 399
AIAALNCSGVVLGSLPIR
Sbjct: 330 AIAALNCSGVVLGSLPIR 347
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y +++D++VT+ + F S CG+V R+ GD + R AF+EF E A+ ALN
Sbjct: 180 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 238
Query: 389 SGVVLGSLPIRVSPSKTPVRPRAP 412
SG +LG P++V PSKT + P P
Sbjct: 239 SGTMLGFYPVKVLPSKTAIAPVNP 262
>gi|356516142|ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
Length = 369
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/325 (70%), Positives = 262/325 (80%), Gaps = 16/325 (4%)
Query: 97 GSIPASNGQDHPKQNGGTMVMPLDQGLYNQNNQRS--NGGGDFKRDMRELQELFSKLNPM 154
G++P NG K G ++ Y N S NGG FKRDMR+L+EL SKLNPM
Sbjct: 57 GTMPVPNGNFSYKHANG-----VNNDGYGMNGVMSEENGGESFKRDMRDLEELLSKLNPM 111
Query: 155 AEEFVPPSLAKTNNNNHGV-NGFNGGF-FANNSLIFNNHNARNGNVNANAAVRRKKSFGQ 212
AEEFVPPSLA N HG+ G N GF + NN ++ NN+ NG N RRK +
Sbjct: 112 AEEFVPPSLA----NTHGLLAGPNAGFGYTNNFILPNNYGNTNGQTNNR---RRKNGYNP 164
Query: 213 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 272
GKRRMN + + +REE+IRRTVYVSDIDQ VTEEQLAALF+ CGQVVDCR+CGDPNS+LR
Sbjct: 165 GKRRMNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILR 224
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 332
FAFIEFTD+EGARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC+RTIY
Sbjct: 225 FAFIEFTDDEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 284
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVV 392
CTNIDKK+TQADVK FFES+CGEV+RLRLLGDYHHSTRIAFVEF +AESAIAAL+CSGV+
Sbjct: 285 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSCSGVI 344
Query: 393 LGSLPIRVSPSKTPVRPRAPRLPMH 417
LGSLPIRVSPSKTPVRPRAPR PMH
Sbjct: 345 LGSLPIRVSPSKTPVRPRAPRPPMH 369
>gi|356509167|ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
Length = 369
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/288 (76%), Positives = 249/288 (86%), Gaps = 9/288 (3%)
Query: 132 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGF-FANNSLIFN 189
NGG FKRDMR+L+EL SKLNPMAEEFVPPSLA N HG + G N GF + NN ++
Sbjct: 89 NGGESFKRDMRDLEELLSKLNPMAEEFVPPSLA----NTHGFLAGPNAGFGYTNNIILPT 144
Query: 190 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
N+ NG N RRK + GKRRMN++ + +REE+IRRTVYVSDIDQ VTEEQLA
Sbjct: 145 NYGNTNGQTNNR---RRKNGYNPGKRRMNNKMDMEKREEMIRRTVYVSDIDQLVTEEQLA 201
Query: 250 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
ALF+ CGQVVDCR+CGDPNS+LRFAF+EFTDEEGARAAL+L+GTMLG+YP+RVLPSKTAI
Sbjct: 202 ALFLNCGQVVDCRVCGDPNSILRFAFVEFTDEEGARAALSLSGTMLGYYPLRVLPSKTAI 261
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
APVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV+RLRLLGDYHHST
Sbjct: 262 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHST 321
Query: 370 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
RIAFVEF +AESAIAAL+CSGV+LGSLPIRVSPSKTPVRPRAPR PMH
Sbjct: 322 RIAFVEFALAESAIAALSCSGVILGSLPIRVSPSKTPVRPRAPRPPMH 369
>gi|449438861|ref|XP_004137206.1| PREDICTED: uncharacterized protein LOC101204595 [Cucumis sativus]
Length = 403
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/296 (72%), Positives = 241/296 (81%), Gaps = 20/296 (6%)
Query: 128 NQRSNG------GGD-FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF 180
NQR NG GGD FKRDMR+L+EL SKLNPMAEEFVPPSLAK + G+
Sbjct: 114 NQRPNGVINGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFS----------GY 163
Query: 181 FANNSLIFNNH---NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVS 237
F L + N + N N + R+K F QG+RRMN++ + +R+E+ RRTVYVS
Sbjct: 164 FTGAGLGYTNDFLLQPNSVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVS 223
Query: 238 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGF 297
DIDQQVTEE LA +F CG+VVDCRICGDPNS+L FAFIEFTDEEGARA+LNL+GT+LGF
Sbjct: 224 DIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGF 283
Query: 298 YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 357
YPVRVLPSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKKVTQA+VKLFFES+CGEV
Sbjct: 284 YPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQ 343
Query: 358 RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
RLRLLGDYHHSTRIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR
Sbjct: 344 RLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
>gi|357464159|ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355491409|gb|AES72612.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 384
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/326 (67%), Positives = 252/326 (77%), Gaps = 21/326 (6%)
Query: 108 PKQNGGTMVMPLDQ----GLYNQ---NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVP 160
P N G + + Q G+ NQ + NGG FKR+MR+L+EL SKLNPMAEEFVP
Sbjct: 64 PNGNHGFIAHQMSQMHGNGVQNQHLVDGYGGNGGESFKREMRDLEELLSKLNPMAEEFVP 123
Query: 161 PSLAKTNNNNHGVNGFNGGF-FANNSLIFNNHNARN--------GNVNANAAVRRKKSFG 211
PSL TN + + G N GF + NN+ + N+ G +N RRK +
Sbjct: 124 PSLV-TNYHGYLAAGPNAGFGYPNNNFMLQNNFGNANANATANNGQINR----RRKNGYN 178
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 271
KRR+ + + +REE+IRRTVYVSDIDQQVTEEQLAALF+ CGQVVDCR+CGDPNS+L
Sbjct: 179 NAKRRVYHKMDMEKREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDPNSIL 238
Query: 272 RFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 331
RFAF+EFTDE GARAALNL+GTMLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC RTI
Sbjct: 239 RFAFVEFTDEVGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCTRTI 298
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGV 391
YCTN+DKK+TQADVK FFES+CGEV RLRLLGDYHHSTRIAFVEF +AESAIAAL+CSGV
Sbjct: 299 YCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIAALSCSGV 358
Query: 392 VLGSLPIRVSPSKTPVRPRAPRLPMH 417
VLGSLPIRVSPSKTPVR RA R PMH
Sbjct: 359 VLGSLPIRVSPSKTPVRARAVRTPMH 384
>gi|449483221|ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
sativus]
Length = 316
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/296 (72%), Positives = 241/296 (81%), Gaps = 20/296 (6%)
Query: 128 NQRSNG------GGD-FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF 180
NQR NG GGD FKRDMR+L+EL SKLNPMAEEFVPPSLAK + G+
Sbjct: 27 NQRPNGVINGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFS----------GY 76
Query: 181 FANNSLIFNNH---NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVS 237
F L + N + N N + R+K F QG+RRMN++ + +R+E+ RRTVYVS
Sbjct: 77 FTGAGLGYTNDFLLQPNSVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVS 136
Query: 238 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGF 297
DIDQQVTEE LA +F CG+VVDCRICGDPNS+L FAFIEFTDEEGARA+LNL+GT+LGF
Sbjct: 137 DIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGF 196
Query: 298 YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 357
YPVRVLPSKTAIAPVNP FLPR++DEREMC+RTIYCTNIDKKVTQA+VKLFFES+CGEV
Sbjct: 197 YPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQ 256
Query: 358 RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
RLRLLGDYHHSTRIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR
Sbjct: 257 RLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 312
>gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group]
gi|215736921|dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639804|gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza sativa Japonica Group]
Length = 302
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/287 (73%), Positives = 234/287 (81%), Gaps = 5/287 (1%)
Query: 134 GGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGF---NGGFFANNSLIFNN 190
G +R+MR+L++L SKLNPMAEEFVPPSLA + + + F A + L
Sbjct: 18 GDAGEREMRDLEDLLSKLNPMAEEFVPPSLAAASPTAYAYYPTPTPSHVFPAVDGL--AG 75
Query: 191 HNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAA 250
R GKRRMNSRTS+AQR+E+IRRTVYVSDID QVTEEQLAA
Sbjct: 76 PRPRKKGGGGGGGGGFGGQGHAGKRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAA 135
Query: 251 LFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIA 310
LF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIA
Sbjct: 136 LFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIA 195
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR 370
PVNPTFLPR++DEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTR
Sbjct: 196 PVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTR 255
Query: 371 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
IAFVEFVMAESA AALNCSGV+LGSLPIRVSPSKTPVRPRAPR MH
Sbjct: 256 IAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 302
>gi|255646437|gb|ACU23697.1| unknown [Glycine max]
Length = 291
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/291 (72%), Positives = 237/291 (81%), Gaps = 14/291 (4%)
Query: 133 GGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGV------NGFNGGFFANNSL 186
GG FKRDMR+L+EL SKLNPMAEEFVPPSL N HG G + NN +
Sbjct: 9 GGESFKRDMRDLEELLSKLNPMAEEFVPPSLT----NTHGYLPGPGAGAGAGFGYPNNFI 64
Query: 187 IFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEE 246
+ NN NG N RRK + GKRR+N + + +REE+IRRTVYVSDIDQ VTEE
Sbjct: 65 LLNNFGDANGQTNR----RRKNGYNHGKRRVNHKMDMEKREEMIRRTVYVSDIDQLVTEE 120
Query: 247 QLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSK 306
QLA LF+ CGQVVD R+CGDPNS+LRFAF+EFTDE+GARAALNL+GTMLG+YP+RVLPSK
Sbjct: 121 QLAGLFLNCGQVVDYRVCGDPNSILRFAFVEFTDEDGARAALNLSGTMLGYYPLRVLPSK 180
Query: 307 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 366
TAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV RLRLLGDYH
Sbjct: 181 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYH 240
Query: 367 HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
HSTRIAFVEF +AESAIAAL+CSGV+LGSLPIRVSPSKTPVR RAPR MH
Sbjct: 241 HSTRIAFVEFTVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPSMH 291
>gi|218200388|gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
Length = 277
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/284 (73%), Positives = 232/284 (81%), Gaps = 24/284 (8%)
Query: 134 GGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNA 193
G +R+MR+L++L SKLNPMAEEFVPPSLA + + S +F +A
Sbjct: 18 GDAGEREMRDLEDLLSKLNPMAEEFVPPSLAAASPTAYAYYPT-----PTPSHVFPAGHA 72
Query: 194 RNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFV 253
GKRRMN RTS+AQR+E+IRRTVYVSDID QVTEEQLAALF+
Sbjct: 73 -------------------GKRRMNRRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFI 113
Query: 254 GCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 313
CGQVVDCR+CGDPNSVLRFAFIEFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIAPVN
Sbjct: 114 NCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVN 173
Query: 314 PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 373
PTFLPR++DEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAF
Sbjct: 174 PTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAF 233
Query: 374 VEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
VEFVMAESA AALNCSGV+LGSLPIRVSPSKTPVRPRAPR MH
Sbjct: 234 VEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 277
>gi|357139501|ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 328
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/305 (71%), Positives = 240/305 (78%), Gaps = 29/305 (9%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN-------------NHGVNGFNGGFFANN 184
+R+MR+L+EL SKLNPMAEEFVPPSLA + N G GGF A+
Sbjct: 28 EREMRDLEELLSKLNPMAEEFVPPSLATAPHPTAAGYAAAAGYYPNPSAGGGRGGFVASP 87
Query: 185 SLIFNNHNARNGNVNANAAVRRKKSFGQ------------GKRRMNSRTSLAQREEIIRR 232
+ H G A A R +K FG GKRR+NSRTS AQR+E+IRR
Sbjct: 88 A----AHRGVVGFPAAPADGRGRKKFGGYAGAGPGGYPQGGKRRVNSRTSQAQRDEVIRR 143
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TVYVSDID QVTEEQLAALF+ GQVVDCR+CGDPNSVLRFAFIEFTDEEGARAAL L+G
Sbjct: 144 TVYVSDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSG 203
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 352
T+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNID+KV+QADVKLFFES+
Sbjct: 204 TVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDRKVSQADVKLFFESI 263
Query: 353 CGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
CGEVYRLRLLGDY H+TRIAFVEFVMAESA AALNCSGV+LGSLPIRVSPSKTPVRPRAP
Sbjct: 264 CGEVYRLRLLGDYQHNTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAP 323
Query: 413 RLPMH 417
R MH
Sbjct: 324 RPLMH 328
>gi|388492572|gb|AFK34352.1| unknown [Medicago truncatula]
Length = 376
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/287 (72%), Positives = 240/287 (83%), Gaps = 9/287 (3%)
Query: 132 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF-FANNSLIFNN 190
NGG FKR+MR+L+EL SKLNPMAEEFVPPSL TNN+ + G GF + NN ++ NN
Sbjct: 96 NGGESFKREMRDLEELLSKLNPMAEEFVPPSL--TNNHGYLAAGPAAGFGYPNNFILLNN 153
Query: 191 HNARNGNVNANAAVRRKKSFG-QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
+ NG N RRK + GKRR N + + +REE+IRRTVY SDIDQ VTEEQLA
Sbjct: 154 YANANGQTNR----RRKNGYTTNGKRRANHKVDMEKREEMIRRTVYASDIDQLVTEEQLA 209
Query: 250 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
+LF+ CGQVVDCR+C DPNS+LRFAFIEFTDEE ARAA++L+GTMLG+YP+RVLPSKTAI
Sbjct: 210 SLFLNCGQVVDCRVCRDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAI 269
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
APVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV+RLRLLGDY HST
Sbjct: 270 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHST 329
Query: 370 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR-APRLP 415
RIAFVEF +AESAIAAL+CSGV+LG+LPIRVSPSKTPVR R +PR P
Sbjct: 330 RIAFVEFAVAESAIAALSCSGVILGALPIRVSPSKTPVRARSSPRSP 376
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672887|gb|EDQ59418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/278 (73%), Positives = 229/278 (82%), Gaps = 23/278 (8%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
MREL++L +KLNP+A+EFVPPS A + A + ++
Sbjct: 1 MRELEDLLTKLNPLAKEFVPPSHAD----------------------LASTTAPSSVASS 38
Query: 201 NAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
R+K F Q KRR+NSRTS AQRE+ IRRTVYVSDIDQQVTEEQLAALF+ CGQVV
Sbjct: 39 KGQPRKKNGFNQVNKRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVV 98
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 99 DCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPR 158
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
+EDEREMCARTIYCTNIDKKV+QADVKLFFES+CGEV RLRLLGDYHHSTRIAFVEFVMA
Sbjct: 159 SEDEREMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMA 218
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
ESA+AALNCSG +LGSLPIRVSPSKTPVRPR+PR P+H
Sbjct: 219 ESAMAALNCSGAILGSLPIRVSPSKTPVRPRSPRSPLH 256
>gi|147804944|emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
Length = 369
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/255 (81%), Positives = 220/255 (86%), Gaps = 18/255 (7%)
Query: 129 QRSNGG-----GDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 183
RSNGG GD DMRELQELFSKLNPMAEEFVPPSLA NG NGGF++N
Sbjct: 118 HRSNGGXLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLAN--------NGLNGGFYSN 169
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 243
S NN RNG VN R+K +FGQGKRRMNSRTS+AQREEIIRRTVYVSDIDQQV
Sbjct: 170 GSETHNN--TRNGQVNGR---RKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQV 224
Query: 244 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 303
TEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVL
Sbjct: 225 TEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVL 284
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
PSKTAIAPVNPTFLPR EDEREMCARTIYCTNIDKKV+QADVKLFFESVCGEVYRLRLLG
Sbjct: 285 PSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLG 344
Query: 364 DYHHSTRIAFVEFVM 378
DYHHSTRIAFVEF+M
Sbjct: 345 DYHHSTRIAFVEFIM 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
E+ RT+Y ++ID++VT+ + F + CG+V R+ GD + R AFVEF E A A
Sbjct: 209 EIIRRTVYVSDIDQQVTEEKLAALFIT-CGQVVDCRVCGDPNSVLRFAFVEFTDEEGARA 267
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
AL+ +G +LG P+RV PSKT + P P
Sbjct: 268 ALSLAGTMLGYYPVRVLPSKTAIAPVNP 295
>gi|357464151|ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 384
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/295 (70%), Positives = 242/295 (82%), Gaps = 17/295 (5%)
Query: 132 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGF-FANNSLIFNN 190
NGG FKR+MR+L+EL SKLNPMAEEFVPPSL TNN+ + G GF + NN ++ NN
Sbjct: 96 NGGESFKREMRDLEELLSKLNPMAEEFVPPSL--TNNHGYLAAGPAAGFGYPNNFILLNN 153
Query: 191 HNARNGNVNANAAVRRKKSFG-QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
+ NG N RRK + GKRR N + + +REE+IRRTVYVSDIDQ VTEEQLA
Sbjct: 154 YANANGQTNR----RRKNGYTTNGKRRANHKVDMEKREEMIRRTVYVSDIDQLVTEEQLA 209
Query: 250 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
+LF+ CGQVVDCR+CGDPNS+LRFAFIEFTDEE ARAA++L+GTMLG+YP+RVLPSKTAI
Sbjct: 210 SLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAI 269
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
APVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQADVK FFES+CGEV+RLRLLGDY HST
Sbjct: 270 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHST 329
Query: 370 RIAFVEFVM--------AESAIAALNCSGVVLGSLPIRVSPSKTPVRPR-APRLP 415
RIAFVEF + AESAIAAL+CSGV+LG+LPIRVSPSKTPVR R +PR P
Sbjct: 330 RIAFVEFAVIFFASFFQAESAIAALSCSGVILGALPIRVSPSKTPVRARSSPRSP 384
>gi|224028543|gb|ACN33347.1| unknown [Zea mays]
gi|413941691|gb|AFW74340.1| CID11 [Zea mays]
Length = 328
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/297 (71%), Positives = 239/297 (80%), Gaps = 18/297 (6%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGFFANNSLIFNNHNARNG 196
+R+MR+L++L SKLNPMAEEFVPPSLA ++ GF+ + F + +G
Sbjct: 33 EREMRDLEDLLSKLNPMAEEFVPPSLASPAALTPAPLSPAAYGFYPAGAG-FAVASPGHG 91
Query: 197 NVNANAAVRRKKSF-------------GQG---KRRMNSRTSLAQREEIIRRTVYVSDID 240
V AV + G G +RR NSRTS+AQR+EIIRRTVYVSDID
Sbjct: 92 GVVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDID 151
Query: 241 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPV
Sbjct: 152 HQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPV 211
Query: 301 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 360
RVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGEV+RLR
Sbjct: 212 RVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLR 271
Query: 361 LLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
LLGDYHHSTRIAFVEFVMAESA AALNCSGV+LGSLPIRVSPSKTPVRPRAPR MH
Sbjct: 272 LLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 328
>gi|226529745|ref|NP_001150079.1| CID11 [Zea mays]
gi|195636508|gb|ACG37722.1| CID11 [Zea mays]
Length = 328
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/297 (71%), Positives = 237/297 (79%), Gaps = 18/297 (6%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGFFANNSLIFNNHNARNG 196
+R+MR+L++L SKLNPMAEEFVPPSLA ++ GF+ + F + +G
Sbjct: 33 EREMRDLEDLLSKLNPMAEEFVPPSLASPAALTPAPLSPAAYGFYPAGAG-FAVASPGHG 91
Query: 197 NVNANAAVRRKKSFGQG----------------KRRMNSRTSLAQREEIIRRTVYVSDID 240
V AV + +RR NSRTS+AQR+EIIRRTVYVSDID
Sbjct: 92 GVVGFPAVADAHAARGRKKGGAGGGFSGHGHPGRRRTNSRTSMAQRDEIIRRTVYVSDID 151
Query: 241 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPV
Sbjct: 152 HQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPV 211
Query: 301 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 360
RVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGEV+RLR
Sbjct: 212 RVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLR 271
Query: 361 LLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
LLGDYHHSTRIAFVEFVMAESA AALNCSGV+LGSLPIRVSPSKTPVRPRAPR MH
Sbjct: 272 LLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 328
>gi|242080315|ref|XP_002444926.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
gi|241941276|gb|EES14421.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
Length = 348
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/311 (68%), Positives = 235/311 (75%), Gaps = 31/311 (9%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNG------------GFF--AN 183
+R+MR+L++L SKLNPMAEEFVPPSL G G GF+ AN
Sbjct: 38 EREMRDLEDLLSKLNPMAEEFVPPSLTSPVAVAVGAGPGPGPLTPAPLSPAAYGFYPAAN 97
Query: 184 NSLIFNNHNARNGNVN-----------------ANAAVRRKKSFGQGKRRMNSRTSLAQR 226
+ A G V A G+RR NSRTS+AQR
Sbjct: 98 AGFAVASPAAHRGVVGFPAAVADAAHAGRGRKKGGAGGGFGGHGHPGRRRTNSRTSMAQR 157
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
+E+IRRTVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARA
Sbjct: 158 DEVIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 217
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
ALNL+GT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+K
Sbjct: 218 ALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLK 277
Query: 347 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP 406
LFFES+CGEV+RLRLLGDYHHSTRIAFVEFVMAESA AALNCSGV+LGSLPIRVSPSKTP
Sbjct: 278 LFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTP 337
Query: 407 VRPRAPRLPMH 417
VRPRAPR MH
Sbjct: 338 VRPRAPRQLMH 348
>gi|326514404|dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/294 (71%), Positives = 229/294 (77%), Gaps = 11/294 (3%)
Query: 133 GGGDFKRDMRELQELFSKLNPMAEEFVPPSLAK----------TNNNNHGVNGFNGGFFA 182
GG +R+MR+L+EL SKLNPMAEEFVPPSLA N GF
Sbjct: 30 GGDAGEREMRDLEELLSKLNPMAEEFVPPSLAAHPMPPPPYAGYYPNGPPAAGFAPVASP 89
Query: 183 NNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
+ + A GKRR+NSRTS AQR+E+IRRTVYVSDID Q
Sbjct: 90 GHRGVVGFPAADGRGRKKFGGGYGGGYPHGGKRRVNSRTSQAQRDEVIRRTVYVSDIDHQ 149
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEEQLAALF+ GQVVDCR+CGDPNSVLRFAFIEFTDEEGARAAL L+GT+LG+YPVRV
Sbjct: 150 VTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSGTVLGYYPVRV 209
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
LPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKV+QADVKLFFES+CGEVYRLRLL
Sbjct: 210 LPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLL 269
Query: 363 GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPM 416
GDY H+TRIAFVEFVMAESA AALNCSGV+LGSLPIRVSP KTPVRPRAPR PM
Sbjct: 270 GDYQHNTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPFKTPVRPRAPR-PM 322
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
gi|222858479|gb|EEE96026.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/279 (75%), Positives = 237/279 (84%), Gaps = 10/279 (3%)
Query: 127 NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSL 186
++QR+ G DM +L E+ SKLNPMAEEFVPPSLA N+ G G GF ANN L
Sbjct: 13 HHQRAKSNG--VNDMNDLVEMLSKLNPMAEEFVPPSLA----NHPGFFGNGFGFNANNFL 66
Query: 187 IFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEE 246
+ N+ NG N R+K S+ QG+RRMN+RTS+AQR+EII+RTVYVSDIDQQVTEE
Sbjct: 67 VQINNGIANGQTNR----RKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQVTEE 122
Query: 247 QLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSK 306
QLA LF+ CGQVVDCRICGDPNSVLRFAF+EFTDEEGAR AL+L+GT+LGFYP+RVLPSK
Sbjct: 123 QLAGLFIHCGQVVDCRICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVLPSK 182
Query: 307 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 366
TAIAPVNPTFLPR+EDEREMCART+YCTNIDKK+TQADV+LFFES CGEV+RLRLLGDYH
Sbjct: 183 TAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYH 242
Query: 367 HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
HSTRIAFVEF +AESAIAALNCSG VLGSLPIRVSPSKT
Sbjct: 243 HSTRIAFVEFAVAESAIAALNCSGAVLGSLPIRVSPSKT 281
>gi|297819578|ref|XP_002877672.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
gi|297323510|gb|EFH53931.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 238/291 (81%), Gaps = 17/291 (5%)
Query: 124 YNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFAN 183
+N+N +R N G ++++L + FSKLNPMA+EFVPPSLA++ + G F N
Sbjct: 73 FNRNGERDNNG-----EIKDLADAFSKLNPMAQEFVPPSLARSQS----------GVFRN 117
Query: 184 NSLIFNNHNARNGNVNANAAV-RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
NN A + N R++SFGQGKRR+N RTSLAQ++++IRRTVYVSDIDQQ
Sbjct: 118 GLGFTNNFAAPPKLADGNDHFPTRRRSFGQGKRRINKRTSLAQKDDVIRRTVYVSDIDQQ 177
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEE LA +F+ CGQVVDCR+CGDPNSVLRFAFIEFT+EEGARAAL+++GT+LGFYP++V
Sbjct: 178 VTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKV 237
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
LPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K+FFE +CGEV+RLR L
Sbjct: 238 LPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKVFFEMLCGEVHRLR-L 296
Query: 363 GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
GDYHH TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 297 GDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 347
>gi|308081540|ref|NP_001182915.1| uncharacterized protein LOC100501201 [Zea mays]
gi|238008164|gb|ACR35117.1| unknown [Zea mays]
gi|413921443|gb|AFW61375.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 342
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/301 (69%), Positives = 233/301 (77%), Gaps = 25/301 (8%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGF- 180
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 181 --------FANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 232
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+G
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSG 216
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 352
T+LG+YPV+VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+
Sbjct: 217 TVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESI 276
Query: 353 CGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
CGEV+RLRLLGDYHHSTRIAFVEFVMAESA AALNCSGVVLGSLPIRVSPSKTPVRPR P
Sbjct: 277 CGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVVLGSLPIRVSPSKTPVRPRVP 336
Query: 413 R 413
R
Sbjct: 337 R 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 249 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 308
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 317
ALN +G +LG P+RV PSKT + P P L
Sbjct: 309 ALNCSGVVLGSLPIRVSPSKTPVRPRVPRHL 339
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
gi|300156398|gb|EFJ23027.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
Length = 267
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/273 (72%), Positives = 225/273 (82%), Gaps = 6/273 (2%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
MREL++L KLNP+A+EFVPPS T + V FF + F + R +
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPS--PTTQGDLEVLLETKAFFVLATFSFFAGSDRKLGL-- 56
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
+ ++ + GK+R N+R S AQREE IRRTVYVSDIDQQVTEEQLAALF+ CGQV+D
Sbjct: 57 --FLVQQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVID 114
Query: 261 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 320
CR+CGDPNSVLRFAF+EFTDEEGAR ALNLAGTMLGFYPVRVLPSKTAI PVNPTFLPR+
Sbjct: 115 CRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRS 174
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE 380
EDER+MCARTIYCTNIDKKV+Q+DVKLFFES+CGEV RLRLLGDYHHSTRIAFVEF +AE
Sbjct: 175 EDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAE 234
Query: 381 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
SA+AALNCSG +LGSLPIRVSPSKTPVRPR+PR
Sbjct: 235 SAMAALNCSGAILGSLPIRVSPSKTPVRPRSPR 267
>gi|15229132|ref|NP_190508.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|79314662|ref|NP_001030833.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|12324442|gb|AAG52182.1|AC012329_9 putative RNA-binding protein; 38450-35693 [Arabidopsis thaliana]
gi|6723409|emb|CAB66418.1| RNA-binding-like protein [Arabidopsis thaliana]
gi|222424104|dbj|BAH20012.1| AT3G49390 [Arabidopsis thaliana]
gi|332645014|gb|AEE78535.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|332645015|gb|AEE78536.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
Length = 353
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/292 (68%), Positives = 241/292 (82%), Gaps = 19/292 (6%)
Query: 124 YNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNN--NHGVNGFNGGFF 181
++ N +R N G ++++L + FSKLNPMA+EFVPPSLA++ + +G+ GF F
Sbjct: 75 FSGNGERDNNG-----EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRNGL-GFTNNFA 128
Query: 182 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQ 241
A L +GN + RR++SFGQGKRRMN RTSLAQ++++IRRTVYVSDIDQ
Sbjct: 129 APPKLA-------DGN---DHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQ 178
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 301
QVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAFIEFT+EEGARAAL+++GT+LGFYP++
Sbjct: 179 QVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLK 238
Query: 302 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
VLPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K FFE +CGEV+RLR
Sbjct: 239 VLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR- 297
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
LGDYHH TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 298 LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
>gi|110737686|dbj|BAF00782.1| RNA-binding - like protein [Arabidopsis thaliana]
Length = 353
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/292 (68%), Positives = 240/292 (82%), Gaps = 19/292 (6%)
Query: 124 YNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNN--NHGVNGFNGGFF 181
++ N +R N G ++++L + FSKLNPMA+EFVPPSLA++ + +G+ GF F
Sbjct: 75 FSGNGERDNNG-----EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRNGL-GFTNNFA 128
Query: 182 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQ 241
A L +GN + RR++SFGQGKRRMN RTSLAQ++++IRRTVYVSDIDQ
Sbjct: 129 APPKLA-------DGN---DHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQ 178
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 301
QVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAFIEFT+EEGARAAL+++GT+LGFYP++
Sbjct: 179 QVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLK 238
Query: 302 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
VLPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K FFE CGEV+RLR
Sbjct: 239 VLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMPCGEVHRLR- 297
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
LGDYHH TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 298 LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
gi|300163899|gb|EFJ30509.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
Length = 260
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/271 (71%), Positives = 219/271 (80%), Gaps = 11/271 (4%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
MREL++L KLNP+A+EFVPPS G + + N+ +
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPS--------RGDPALSKELLSKQ---INHQQQQLQQQQP 49
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
R++ + GK+R N+R S AQREE IRRTVYVSDIDQQVTEEQLAALF+ CGQV+D
Sbjct: 50 LQQQRKQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVID 109
Query: 261 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 320
CR+CGDPNSVLRFAF+EFTDEEGAR ALNLAGTMLGFYPVRVLPSKTAI PVNPTFLPR+
Sbjct: 110 CRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRS 169
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE 380
EDER+MCARTIYCTNIDKKV+Q+DVKLFFES+CGEV RLRLLGDYHHSTRIAFVEF +AE
Sbjct: 170 EDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAE 229
Query: 381 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRA 411
SA+AALNCSG +LGSLPIRVSPSKTPVRPR+
Sbjct: 230 SAMAALNCSGAILGSLPIRVSPSKTPVRPRS 260
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 319 RTEDEREMCAR-TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 377
+++ +RE C R T+Y ++ID++VT+ + F + CG+V R+ GD + R AFVEF
Sbjct: 70 QSKAQREECIRRTVYVSDIDQQVTEEQLAALFIN-CGQVIDCRVCGDPNSVLRFAFVEFT 128
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
E A ALN +G +LG P+RV PSKT + P P
Sbjct: 129 DEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNP 163
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/288 (69%), Positives = 226/288 (78%), Gaps = 23/288 (7%)
Query: 130 RSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFN 189
R+ G F DMREL +L SKLNP+AEEF+P + + +NG G FANNS
Sbjct: 24 RAENKGGFNGDMRELVDLLSKLNPLAEEFIP---QPHRSPSFIING--NGSFANNSR--- 75
Query: 190 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
R+K +F QGKRR+N R AQ+E+ +RRTVYV DID QVTEEQLA
Sbjct: 76 ---------------RKKNNFNQGKRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLA 120
Query: 250 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
ALF+ CGQV+DCRICGDPNSVLRFAFIEF DE+GARAAL+LAGTMLG+YPVRVLPSKTAI
Sbjct: 121 ALFINCGQVIDCRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAI 180
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
PVNPTFLPR+EDEREMCARTIYCTNIDKKV+Q +V++FFES+CGEV RLRLLGD+ HST
Sbjct: 181 LPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHST 240
Query: 370 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
RIAFVEFVMAESAI ALNCSG ++GSLPIRVSPSKTPVRPR P MH
Sbjct: 241 RIAFVEFVMAESAILALNCSGAIVGSLPIRVSPSKTPVRPRIPHPTMH 288
>gi|115474513|ref|NP_001060853.1| Os08g0116400 [Oryza sativa Japonica Group]
gi|113622822|dbj|BAF22767.1| Os08g0116400, partial [Oryza sativa Japonica Group]
Length = 283
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/204 (90%), Positives = 198/204 (97%)
Query: 214 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRF 273
KRRMNSRTS+AQR+E+IRRTVYVSDID QVTEEQLAALF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 80 KRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRF 139
Query: 274 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
AFIEFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYC
Sbjct: 140 AFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 199
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVL 393
TNIDKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAFVEFVMAESA AALNCSGV+L
Sbjct: 200 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVIL 259
Query: 394 GSLPIRVSPSKTPVRPRAPRLPMH 417
GSLPIRVSPSKTPVRPRAPR MH
Sbjct: 260 GSLPIRVSPSKTPVRPRAPRQLMH 283
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685203|gb|EDQ71600.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 201/213 (94%), Gaps = 1/213 (0%)
Query: 206 RKKSFGQGK-RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 264
+K + QG RR+NSRTS AQRE+ IRRTVYVSDIDQQVTEEQLAALF+ CGQVVDCR+C
Sbjct: 1 KKNGYNQGNNRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVC 60
Query: 265 GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 324
GDPNSVLRFAF+EFTDEEGARAAL+LAGTMLG+YPVRVLPSKTAI PVNPTFLPR+EDER
Sbjct: 61 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDER 120
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
EMCARTIYCTNIDKKV+QADVKLFFES+CGEV RLRLLGDYHHSTRIAFVEFVMAESA+A
Sbjct: 121 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMA 180
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
ALNCSG +LGSLPIRVSPSKTPVRPR+PR P+H
Sbjct: 181 ALNCSGAILGSLPIRVSPSKTPVRPRSPRSPLH 213
>gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
Length = 201
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/201 (90%), Positives = 195/201 (97%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 276
MNSRTS+AQR+E+IRRTVYVSDID QVTEEQLAALF+ CGQVVDCR+CGDPNSVLRFAFI
Sbjct: 1 MNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFI 60
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
EFTDEE ARAALNL+GT+LG+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNI
Sbjct: 61 EFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNI 120
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
DKKV+QADVKLFFES+CGEVYRLRLLGDYHHSTRIAFVEFVMAESA AALNCSGV+LGSL
Sbjct: 121 DKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSL 180
Query: 397 PIRVSPSKTPVRPRAPRLPMH 417
PIRVSPSKTPVRPRAPR MH
Sbjct: 181 PIRVSPSKTPVRPRAPRQLMH 201
>gi|14030687|gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana]
gi|25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana]
Length = 201
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/201 (90%), Positives = 192/201 (95%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 276
MN+RTS+AQRE++IRRTVYVSD+DQQVTEEQLA LFV CGQVVDCRICGDPNSVLRFAFI
Sbjct: 1 MNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFI 60
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
EFTDEEGA ALNL+GTMLGFYPV+VLPSKTAIAPVNPTFLPRTEDE EMCARTIYCTNI
Sbjct: 61 EFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDESEMCARTIYCTNI 120
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
DKKVTQ+DVK+FFE CGEVYRLRLLGDY HSTRIAFVEFVMAESAIAALNCSGVVLGSL
Sbjct: 121 DKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSL 180
Query: 397 PIRVSPSKTPVRPRAPRLPMH 417
PIRVSPSKTPVRPR+PR PMH
Sbjct: 181 PIRVSPSKTPVRPRSPRHPMH 201
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/277 (67%), Positives = 217/277 (78%), Gaps = 14/277 (5%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
+++L ++F+KLNP+A+EF P S K N +N F + N +A N
Sbjct: 46 VQKLVDMFTKLNPLAKEFFPSSYNKNNPKQFHINNFP---------VPNKQSA-----ND 91
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
N RR+ F QG+RR+N R AQRE+ IRRTVYVSDIDQ VTEEQLA LF GCGQVVD
Sbjct: 92 NFPKRRRNDFNQGRRRLNGRAYRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVD 151
Query: 261 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 320
CRICGDP SVLRFAF+EF E+GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLP++
Sbjct: 152 CRICGDPRSVLRFAFVEFAVEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQS 211
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE 380
EDEREMC RT+YCTNI+KKV+QA+VK FFES+CGEV RLRLLGD+ HSTRIAFVEF MAE
Sbjct: 212 EDEREMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAMAE 271
Query: 381 SAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
SAI ALNCSG+VLGS P+RVSPSKTPVRPR RL +H
Sbjct: 272 SAIVALNCSGMVLGSQPVRVSPSKTPVRPRVTRLALH 308
>gi|147803358|emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
Length = 195
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/195 (90%), Positives = 190/195 (97%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 282
+AQREE+I+RTVYVSDIDQQVTEE LAALF+ CGQVVDCRICGDPNSVLRFAF+EFTDEE
Sbjct: 1 MAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEE 60
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
GARAAL+LAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVTQ
Sbjct: 61 GARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQ 120
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
A+VKLFFES+CGEV+RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG +LGSLPIRVSP
Sbjct: 121 AEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGAILGSLPIRVSP 180
Query: 403 SKTPVRPRAPRLPMH 417
SKTPVRPRAPR +H
Sbjct: 181 SKTPVRPRAPRPALH 195
>gi|358248658|ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/293 (64%), Positives = 227/293 (77%), Gaps = 6/293 (2%)
Query: 125 NQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANN 184
+ N S + + +++L ++F+KLNP+A+EF P S + N++HG GFN
Sbjct: 10 DANKMDSKPKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSP--NHDHGFQGFNQ-LSPTQ 66
Query: 185 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 244
L+ +A +N+ RR+ SF QG+RR++ R+ AQRE+ IRRTVYVS+IDQ VT
Sbjct: 67 FLVSTKPSANENFLNSR---RRRNSFNQGRRRVSGRSLKAQREDSIRRTVYVSEIDQHVT 123
Query: 245 EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLP 304
EE+LAALF CGQV+DCRICGDP+SVLRFAF+EF DE GAR ALNL GT+LG+YPVRVLP
Sbjct: 124 EERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLP 183
Query: 305 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 364
SKTAI PVNPTFLPR++DEREMCARTIYCTNIDKKV+QA+VK FFES CGEV RLRLLGD
Sbjct: 184 SKTAILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGD 243
Query: 365 YHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
HSTRIAFVEF MAESAI ALNCSG++LG+ PIRVSPSKTPVRPR PR H
Sbjct: 244 QVHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVPRPASH 296
>gi|413921444|gb|AFW61376.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 482
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/286 (68%), Positives = 219/286 (76%), Gaps = 25/286 (8%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGFF 181
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 182 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 232
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+G
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSG 216
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 352
T+LG+YPV+VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+
Sbjct: 217 TVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESI 276
Query: 353 CGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
CGEV+RLRLLGDYHHSTRIAFVEFVMAESA AALNCSGVVLGSLPI
Sbjct: 277 CGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVVLGSLPI 322
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF E A AALN
Sbjct: 156 RTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNL 214
Query: 389 SGVVLGSLPIRVSPSKTPVRP 409
SG VLG P++V PSKT + P
Sbjct: 215 SGTVLGYYPVKVLPSKTAIAP 235
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 249 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 308
Query: 287 ALNLAGTMLGFYPVRVL 303
ALN +G +LG P+ ++
Sbjct: 309 ALNCSGVVLGSLPISLM 325
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 216/278 (77%), Gaps = 16/278 (5%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR-NGNVN 199
+++L ++F+KLNP+A+EF P S +K N N L FNN + N
Sbjct: 45 VQKLVDMFTKLNPLAKEFFPSSYSKNNPNE---------------LHFNNFAVPVKQSAN 89
Query: 200 ANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
N R++ +F QG+R++N R AQ+E+ IRRTVYVSDIDQ VTEE+LA LF GCGQVV
Sbjct: 90 DNFPKRKRNNFNQGRRKLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVV 149
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCR+CGDP+SVLRFAF+EF DE+GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 150 DCRVCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPR 209
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
+EDEREMC RT+YCTNIDKKV+Q +VK FFES+CGEV RLRLLGD HSTRIAFVEF MA
Sbjct: 210 SEDEREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMA 269
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
ESAI ALNCSG+ LGS P+RVSPSKTPVRPR R MH
Sbjct: 270 ESAIVALNCSGMALGSQPVRVSPSKTPVRPRVTRPAMH 307
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
gi|11994215|dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana]
gi|332642006|gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
Length = 327
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/299 (61%), Positives = 222/299 (74%), Gaps = 4/299 (1%)
Query: 119 LDQGLYNQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNG 178
+D+G+ + S + + DM +L +F KLNP+A+EF P NN V N
Sbjct: 28 IDEGIEKSSITDSKTETESRLDMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQ--VAKANQ 85
Query: 179 GFFANNSLIFNNHNARNGNVNA--NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYV 236
A++ + +++A + R+++++ QG+RR+ R S AQRE+ IRRTVYV
Sbjct: 86 FLPADDFETTKKQSGEEFDLDAKKDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYV 145
Query: 237 SDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLG 296
SDIDQ VTEE LA LF CGQVVDCRICGDP+SVLRFAF+EF D++GA AL+L GTMLG
Sbjct: 146 SDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLG 205
Query: 297 FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
FYPVRVLPSKTAI PVNPTFLPR+EDEREMC RTIYCTNIDKKV+QADV+ FFES CGEV
Sbjct: 206 FYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEV 265
Query: 357 YRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
RLRLLGD HSTRIAFVEF +A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR R P
Sbjct: 266 TRLRLLGDQLHSTRIAFVEFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITRPP 324
>gi|224061485|ref|XP_002300503.1| predicted protein [Populus trichocarpa]
gi|222847761|gb|EEE85308.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 170/197 (86%), Positives = 187/197 (94%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 276
++SRTS+AQRE+ +RRTVYVSDIDQQVTEEQLAALF+ CGQVVDCRICGDPNSVL FAFI
Sbjct: 1 ISSRTSMAQREDTVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPNSVLHFAFI 60
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
EFTDEEGARAAL+L+GTMLG+YPV+VLPSKTAIAPVN TFLPR +DEREMCARTIYCTNI
Sbjct: 61 EFTDEEGARAALSLSGTMLGYYPVKVLPSKTAIAPVNHTFLPRNDDEREMCARTIYCTNI 120
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
D+ TQ+D+KLFFES+CGEVYRLRLLGD+HH TRIAFVEFVMAESAIAALNCSG V+GSL
Sbjct: 121 DRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVMAESAIAALNCSGAVIGSL 180
Query: 397 PIRVSPSKTPVRPRAPR 413
PIRVSPSKTPVRPR PR
Sbjct: 181 PIRVSPSKTPVRPRGPR 197
>gi|356556922|ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 296
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/294 (62%), Positives = 225/294 (76%), Gaps = 8/294 (2%)
Query: 125 NQNNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNN-HGVNGFNGGFFAN 183
+ N S + + +++L ++F+KLNP+A+EF P S + ++N G N + F
Sbjct: 10 DANKMDSKPKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSPNHDNRFQGFNQLSPTHF-- 67
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQV 243
L+ +A + N RR+ SF QG+R+++ R+ AQRE+ IRRTVYVS+IDQ V
Sbjct: 68 --LVSTKPSA---DENFPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVYVSEIDQHV 122
Query: 244 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL 303
TEE+LAALF CGQV+DCRICGDP+SVLRFAF+EF DE GAR ALNL GT+LG+YPVRVL
Sbjct: 123 TEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVL 182
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
PSKTAI PVNPTFLPR++DEREMCART+YCTNIDKKV+QA+VK FFES CGEV RLRLLG
Sbjct: 183 PSKTAILPVNPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLG 242
Query: 364 DYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
D+ HSTRIAFVEF MAESAI ALNCSG++LG+ PIRVSPSKTPVRPR R H
Sbjct: 243 DHVHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVTRPASH 296
>gi|224115532|ref|XP_002317057.1| predicted protein [Populus trichocarpa]
gi|222860122|gb|EEE97669.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/192 (87%), Positives = 185/192 (96%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 282
+AQ+EEI+RRTVYVSDIDQQVTEEQLAALF+ CGQVVDCRICGDP SVLRFAFIEFTDEE
Sbjct: 1 MAQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEE 60
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
GA+AAL+L+GTMLG+YPV+VLPSKTAIAPVNPTFLPR +DEREMCARTIYCTNID+ +TQ
Sbjct: 61 GAQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQ 120
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
A++KLFFES+CGEVY LRLLGD+HH TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP
Sbjct: 121 ANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 180
Query: 403 SKTPVRPRAPRL 414
SKTPVRPR PR+
Sbjct: 181 SKTPVRPRGPRI 192
>gi|388509636|gb|AFK42884.1| unknown [Lotus japonicus]
Length = 313
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/281 (64%), Positives = 223/281 (79%), Gaps = 5/281 (1%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR- 194
D + +M++L ++F+KLNP+AEEF+P S A + +H GFN ++ N + NN+N +
Sbjct: 30 DSEFNMQKLVDIFTKLNPLAEEFIPSSYAAAAHRDHLHQGFNQ--WSPNPFLVNNNNNKP 87
Query: 195 --NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALF 252
+ RR+ +F QG RR R AQRE+ +RRTVYVSDIDQ VTEE+LAALF
Sbjct: 88 LADDQYPNANNRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALF 147
Query: 253 VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 312
CG V+DCRICGDP+SVLRFAF+EF DE GARAALNL+GT+LG+YPVRVLPSKTAI PV
Sbjct: 148 TTCGSVIDCRICGDPHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPV 207
Query: 313 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIA 372
NPTFLPR++DEREMC+RT+YCTNIDKKV+QA+VK FFE CGEV R+RLLGD+ HSTRIA
Sbjct: 208 NPTFLPRSDDEREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIA 267
Query: 373 FVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
FVEF +AESAI AL+CSG++LG+ P+RVSPSKTPVRPR PR
Sbjct: 268 FVEFAIAESAIIALSCSGMLLGTQPVRVSPSKTPVRPRVPR 308
>gi|218187722|gb|EEC70149.1| hypothetical protein OsI_00850 [Oryza sativa Indica Group]
Length = 317
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/290 (62%), Positives = 217/290 (74%), Gaps = 15/290 (5%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNN------------NNHGVNGFNGGFFANN 184
+++ +++L +L SKLNP A+EFVP S A ++ + + + G+NGG +
Sbjct: 28 YQKGVQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYNSIGGWNGGGKESG 87
Query: 185 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 244
+ + + R + + +RR QG+RRMN R A RE+ IRRTVYVSDID VT
Sbjct: 88 A---DAYQQRRDLTDDDQLLRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVT 144
Query: 245 EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLP 304
EE+LA +F CGQVVDCRICGDP+SVLRFAFIEF DEEGARAALNL GTMLGFYPVRVLP
Sbjct: 145 EERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARAALNLGGTMLGFYPVRVLP 204
Query: 305 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 364
SKTAI PVNP FLPRTEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD
Sbjct: 205 SKTAILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGD 264
Query: 365 YHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 265 NVHSTRIAFVEFVHAECAIMALNCSGMILGTLPVRVSPSKTPVKPRLNRV 314
>gi|115435208|ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|215737283|dbj|BAG96212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 308
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 181/279 (64%), Positives = 214/279 (76%), Gaps = 2/279 (0%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 196
+++ +++L +L SKLNP A+EFVP S A ++ + ++ + F NS+ N +
Sbjct: 28 YQKGVQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSA-DAPVFDYNSIGGWNGGGKES 86
Query: 197 NVNANAAVRRKKSF-GQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGC 255
+A RR+ + QG+RRMN R A RE+ IRRTVYVSDID VTEE+LA +F C
Sbjct: 87 GADAYQQRRRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERLADIFANC 146
Query: 256 GQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
GQVVDCRICGDP+SVLRFAFIEF DEEGAR ALNL GTMLGFYPVRVLPSKTAI PVNP
Sbjct: 147 GQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTAILPVNPK 206
Query: 316 FLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVE 375
FLPRTEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD HSTRIAFVE
Sbjct: 207 FLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVE 266
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
FV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 267 FVHAECAIMALNCSGMILGTLPVRVSPSKTPVKPRLNRV 305
>gi|222617961|gb|EEE54093.1| hypothetical protein OsJ_00835 [Oryza sativa Japonica Group]
Length = 317
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 181/290 (62%), Positives = 216/290 (74%), Gaps = 15/290 (5%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNN------------NNHGVNGFNGGFFANN 184
+++ +++L +L SKLNP A+EFVP S A ++ + + + G+NGG +
Sbjct: 28 YQKGVQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYNSIGGWNGGGKESG 87
Query: 185 SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVT 244
+ + + R + + +RR QG+RRMN R A RE+ IRRTVYVSDID VT
Sbjct: 88 A---DAYQQRRDLTDDDQLLRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVT 144
Query: 245 EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLP 304
EE+LA +F CGQVVDCRICGDP+SVLRFAFIEF DEEGAR ALNL GTMLGFYPVRVLP
Sbjct: 145 EERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLP 204
Query: 305 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 364
SKTAI PVNP FLPRTEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD
Sbjct: 205 SKTAILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGD 264
Query: 365 YHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 265 NVHSTRIAFVEFVHAECAIMALNCSGMILGTLPVRVSPSKTPVKPRLNRV 314
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|332194856|gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 308
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 203/276 (73%), Gaps = 21/276 (7%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
M++L +F KLNP A+EF P TN ++ V N
Sbjct: 50 MKKLVAMFKKLNPEAKEFFPSYKRNTNQSDDFVIAIKPSGEDNK---------------- 93
Query: 201 NAAVRRKKSFGQGKR-RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
+R+ ++ QG+R R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQVV
Sbjct: 94 ----KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVV 149
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCRICGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 150 DCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPR 209
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
+EDEREMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF MA
Sbjct: 210 SEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 269
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
ESA+AALNCSG+VLGS PIRVSPSKTPVR R R P
Sbjct: 270 ESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 305
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 295
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/276 (63%), Positives = 203/276 (73%), Gaps = 21/276 (7%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
M++L +F KLNP A+EF P TN ++ V N
Sbjct: 37 MKKLVAMFKKLNPEAKEFFPSYKRNTNQSDDFVIAIKPSGEDNK---------------- 80
Query: 201 NAAVRRKKSFGQGKR-RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVV 259
+R+ ++ QG+R R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQVV
Sbjct: 81 ----KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVV 136
Query: 260 DCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
DCRICGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 137 DCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPR 196
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
+EDEREMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF MA
Sbjct: 197 SEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 256
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
ESA+AALNCSG+VLGS PIRVSPSKTPVR R R P
Sbjct: 257 ESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 292
>gi|225462109|ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera]
gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/268 (67%), Positives = 209/268 (77%), Gaps = 18/268 (6%)
Query: 150 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 209
KLNP+A+EF P S ++++ LI + + + N RR+ +
Sbjct: 43 KLNPLAKEFFPSS------------------YSHDHLIPTDFSKDSPNDAYPNNRRRRNN 84
Query: 210 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 269
+ QG+RR++ R AQRE+ IRRTVYVSDIDQ VTEE+LAALF CGQVVDCR+CGDP+S
Sbjct: 85 YNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHS 144
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
VLRFAF+EF DE GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLPR+EDEREMCAR
Sbjct: 145 VLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCAR 204
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCS 389
T+YCTNIDKKV+QA+VK FFE CGEV RLRLLGD+ HSTRIAFVEF MAESAI ALNCS
Sbjct: 205 TVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVALNCS 264
Query: 390 GVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
G+VLG+ PIRVSPSKTPVRPR PR +H
Sbjct: 265 GLVLGTQPIRVSPSKTPVRPRVPRATLH 292
>gi|357140847|ref|XP_003571974.1| PREDICTED: uncharacterized protein LOC100841044 [Brachypodium
distachyon]
Length = 350
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 187/303 (61%), Positives = 219/303 (72%), Gaps = 30/303 (9%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNN---HNA 193
+K DMR+L+EL SKLNP A+EFVP S + G GG A+ + + A
Sbjct: 50 YKSDMRKLEELMSKLNPCAQEFVPSSRRAASAPAPG-----GGLSADAPVFVSAAEFFGA 104
Query: 194 RNGNVNANAA----------------------VRRKKSFGQGKRRMNSRTSLAQREEIIR 231
G + A +RR SF QG+RRM RT + RE+ +R
Sbjct: 105 GAGQLQGTGAGGGRDSSSDGSSNGGGQPQNRRIRRNGSFNQGRRRMGGRTRRSDREDSVR 164
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RTVYVSD+DQQVTE++LA +F CGQVVDCRICGDP+SVLRFAFIEF D+ GARAALNLA
Sbjct: 165 RTVYVSDVDQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALNLA 224
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
GTMLG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDKKVT+ DVK+FF+
Sbjct: 225 GTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEDDVKIFFQR 284
Query: 352 VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA 411
+CG+V RLRLLGDY HST IAFVEF AESAI ALN SG+VLGSLPIRVSPSKTPVRPR+
Sbjct: 285 LCGKVSRLRLLGDYVHSTCIAFVEFTQAESAILALNYSGLVLGSLPIRVSPSKTPVRPRS 344
Query: 412 PRL 414
PR+
Sbjct: 345 PRV 347
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein, putative [Ricinus communis]
Length = 281
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/259 (65%), Positives = 206/259 (79%), Gaps = 9/259 (3%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
+++L ++F+KLNP+A+EF P S NNNN N N NN + + + N ++
Sbjct: 31 VQKLVDMFTKLNPLAKEFFPSSY---NNNNITHNFLN----LNNFAVVVDKQSPIDNFSS 83
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
N R++ ++ QGKRR+N R AQR++ IRRTVYVSDIDQ VTEE+LA LF CGQVVD
Sbjct: 84 NR--RKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQHVTEERLAGLFSSCGQVVD 141
Query: 261 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 320
CR+CGDP+SVLRFAF+EF DE GARAALNL GT+LG+YP RVLPSKTAI PVNPTFLPR+
Sbjct: 142 CRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFRVLPSKTAILPVNPTFLPRS 201
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE 380
EDEREMC+RT+YCTNIDKK++QA+VK FFES CGEV RLRLLGD+ HSTRIAFVEF MAE
Sbjct: 202 EDEREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVHSTRIAFVEFAMAE 261
Query: 381 SAIAALNCSGVVLGSLPIR 399
SAI ALNCSG+V+G+ PIR
Sbjct: 262 SAIIALNCSGMVVGTQPIR 280
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y ++ID+ VT+ + F S CG+V R+ GD H R AFVEF A AALN
Sbjct: 113 RTVYVSDIDQHVTEERLAGLFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 171
Query: 389 SGVVLGSLPIRVSPSKTPVRPRAP 412
G VLG P RV PSKT + P P
Sbjct: 172 GGTVLGYYPFRVLPSKTAILPVNP 195
>gi|326502318|dbj|BAJ95222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/289 (63%), Positives = 210/289 (72%), Gaps = 13/289 (4%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNN---------HG-VNGFNGGFFANNS 185
++ +D+++L +L SKLNP A+EFVP S A T +G + G NGG A+
Sbjct: 29 EYHKDVQKLVDLLSKLNPAAKEFVPSSAAATPRKGLSADAPVFYYGSIGGRNGGIGADAG 88
Query: 186 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 245
I R V+ RR G+RR N R A REE IRRTVYVS++D VTE
Sbjct: 89 YIGYQQRMRRNFVDNE---RRNGYINHGRRRTNERARRADREESIRRTVYVSELDHTVTE 145
Query: 246 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 305
E+LA +F CGQVVDCRICGDPNSV+RFAFIEF EEGARAALNL GTMLGFYPVRVLPS
Sbjct: 146 ERLAEIFANCGQVVDCRICGDPNSVMRFAFIEFAGEEGARAALNLGGTMLGFYPVRVLPS 205
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
KTAI PVNP FLP TEDE+EM RT+YCTNIDKKVTQ DVK FFE +CGEV RLRLLGD
Sbjct: 206 KTAILPVNPKFLPATEDEKEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLRLLGDN 265
Query: 366 HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 266 VHSTRIAFVEFVNAEGAIQALNCSGMILGTLPVRVSPSKTPVKPRLNRV 314
>gi|357127346|ref|XP_003565343.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 310
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/293 (62%), Positives = 215/293 (73%), Gaps = 26/293 (8%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNN----------NNHGVNGFNGGF---FAN 183
+++D+++L +L S LNP A EFVP S A + + + G NGG +
Sbjct: 28 YQKDVQKLVDLLSNLNPAAREFVPSSAAPPSKKALSADAPVFDYCSIGGANGGSRDSGVD 87
Query: 184 NSLIFNN-HNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
++ I N H R+G +N G+RRMN R A RE+ IRRTVYVS++D
Sbjct: 88 STYIGNQQHKMRSGYIN------------HGRRRMNERARRADREDSIRRTVYVSELDHT 135
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEE+LA +F CGQVVDCRICGDP+SVLRFAFIEF+DEEGARAALNL GTMLGFYPVRV
Sbjct: 136 VTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFSDEEGARAALNLGGTMLGFYPVRV 195
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
LPSKTAI PVNP FLPRTEDE+EM RTIYCTNIDKKVTQ DVK FF+ +CGEV RLRLL
Sbjct: 196 LPSKTAILPVNPKFLPRTEDEKEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLL 255
Query: 363 GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
GD HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+P
Sbjct: 256 GDNVHSTRIAFVEFVNAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRINRVP 308
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|12324022|gb|AAG51971.1|AC024260_9 RNA-binding protein, putative; 40942-42923 [Arabidopsis thaliana]
gi|48427656|gb|AAT42377.1| At1g53650 [Arabidopsis thaliana]
gi|332194855|gb|AEE32976.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 314
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/278 (62%), Positives = 202/278 (72%), Gaps = 19/278 (6%)
Query: 141 MRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA 200
M++L +F KLNP A+EF P TN ++ V +G N
Sbjct: 50 MKKLVAMFKKLNPEAKEFFPSYKRNTNQSDDFVIAIKP----------------SGEDNK 93
Query: 201 NAAVRRKKSFGQGKR---RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQ 257
A+ R++ + R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQ
Sbjct: 94 KVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQ 153
Query: 258 VVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 317
VVDCRICGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFL
Sbjct: 154 VVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFL 213
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 377
PR+EDEREMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF
Sbjct: 214 PRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFA 273
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
MAESA+AALNCSG+VLGS PIRVSPSKTPVR R R P
Sbjct: 274 MAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 311
>gi|357124236|ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 179/306 (58%), Positives = 217/306 (70%), Gaps = 26/306 (8%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIF------- 188
++K D+R+L+ELF KLNP AEEFVP L++ + + F + ++ +
Sbjct: 48 EYKSDVRKLEELFKKLNPSAEEFVP--LSRRQADGGRRLSADAPVFVSPAIDYYAPHHPF 105
Query: 189 -----------------NNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIR 231
++ +G+VN RR+ F QG+RRM R RE+ +R
Sbjct: 106 QQQQPQQMHVLQVVGGGGRDSSSDGSVNGQPNRRRRNGFNQGRRRMGPRPRRTDREDSVR 165
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAFIEF D+ GARAAL+LA
Sbjct: 166 RTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALSLA 225
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 226 GTILGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKKFFEG 285
Query: 352 VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA 411
+CGEV RLRLLGDY HST IAFVEFV AE AI ALNCSG++LGSLP+RVSPSKTPVRPR+
Sbjct: 286 ICGEVARLRLLGDYVHSTCIAFVEFVQAEGAIMALNCSGMLLGSLPVRVSPSKTPVRPRS 345
Query: 412 PRLPMH 417
PR H
Sbjct: 346 PRAMSH 351
>gi|413941689|gb|AFW74338.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 182
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/176 (90%), Positives = 171/176 (97%)
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 301
+VTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPVR
Sbjct: 7 RVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 66
Query: 302 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
VLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGEV+RLRL
Sbjct: 67 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 126
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
LGDYHHSTRIAFVEFVMAESA AALNCSGV+LGSLPIRVSPSKTPVRPRAPR MH
Sbjct: 127 LGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 182
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF E A A
Sbjct: 90 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 149
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
ALN +G +LG P+RV PSKT + P P
Sbjct: 150 ALNCSGVILGSLPIRVSPSKTPVRPRAP 177
>gi|326514092|dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 215/306 (70%), Gaps = 26/306 (8%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIF------- 188
++K D+R+L+ELF KLNP AEEFVP L++ + + F + ++ +
Sbjct: 48 EYKSDVRKLEELFKKLNPSAEEFVP--LSRRQGDGARRLSADAPVFVSPAIDYYAPHHPF 105
Query: 189 -----------------NNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIR 231
++ +G+ N RR+ F QG+RRM R RE+ +R
Sbjct: 106 QHQQMHVLQVVGGGGGAGRDSSSDGSANGQPNRRRRNGFNQGRRRMGVRPRRTDREDSVR 165
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAFIEF D+ GARAAL L
Sbjct: 166 RTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALG 225
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
GT+LGFYPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 226 GTVLGFYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEG 285
Query: 352 VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA 411
+CGEV RLRLLGDY H+T IAFVEFV AE AI ALNCSG++LGSLP+RVSPSKTPVRPR+
Sbjct: 286 ICGEVARLRLLGDYVHATCIAFVEFVEAEGAILALNCSGMLLGSLPVRVSPSKTPVRPRS 345
Query: 412 PRLPMH 417
PR+ H
Sbjct: 346 PRVVSH 351
>gi|242051635|ref|XP_002454963.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
gi|241926938|gb|EES00083.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
Length = 298
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 177/289 (61%), Positives = 209/289 (72%), Gaps = 20/289 (6%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNN----------NNHGVNGFNGGFFANNS 185
+++ +++L +L SKLNP A+EFVP + A + + G NG A
Sbjct: 17 EYQAGVQKLVDLLSKLNPAAKEFVPSAAASPPKKALSADAPVFDYRSIGGGNGATDAAFY 76
Query: 186 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 245
+ F N + R GN N QG+RR N R A+RE+ IRRTVYVS++D VTE
Sbjct: 77 VGFGNQHRRRGNGYIN----------QGRRRTNDRVRRAEREDSIRRTVYVSELDHTVTE 126
Query: 246 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 305
E+LA +F CGQVVDCRICGDP+SVLRFAFIEF+DEEGAR ALNL GT+ GFYPVRVLPS
Sbjct: 127 ERLADIFATCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPS 186
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
KTAI PVNP FLPRTEDE+EM RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD
Sbjct: 187 KTAILPVNPKFLPRTEDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDN 246
Query: 366 HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 247 VHSTRIAFVEFVHAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNRV 295
>gi|297812631|ref|XP_002874199.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
gi|297320036|gb|EFH50458.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 167/267 (62%), Positives = 209/267 (78%), Gaps = 17/267 (6%)
Query: 143 ELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANA 202
+L S+LNPMA+EFVP LA+T++ F + L F N N V A +
Sbjct: 58 DLMSEISRLNPMAKEFVPSFLAQTHSE-----------FLRSRLWFTN----NFPVQAIS 102
Query: 203 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 262
+RR SFGQG+R +N +T+L Q E++I+RTVYVSDIDQQVTEEQLA+LF+ CGQVVDCR
Sbjct: 103 TMRR--SFGQGRRWINKKTNLVQNEDVIKRTVYVSDIDQQVTEEQLASLFLSCGQVVDCR 160
Query: 263 ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTED 322
ICGD S+LRFAFIEFTD EGAR+AL +GT+ G +P+RV SKTAIAPVNP+FLPR+E+
Sbjct: 161 ICGDHKSILRFAFIEFTDAEGARSALRKSGTVFGSHPIRVHISKTAIAPVNPSFLPRSEE 220
Query: 323 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA 382
E E C +T+YCTNIDK+VT+ +++ FF++VCGEV+ LRLLGD++H TRIAFVEF +AESA
Sbjct: 221 ELEKCGKTVYCTNIDKQVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESA 280
Query: 383 IAALNCSGVVLGSLPIRVSPSKTPVRP 409
I+ALN SGVVLG LPIR+SPSKTPVRP
Sbjct: 281 ISALNYSGVVLGELPIRISPSKTPVRP 307
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
++ RT+Y ++ID++VT+ + F S CG+V R+ GD+ R AF+EF AE A +
Sbjct: 126 DVIKRTVYVSDIDQQVTEEQLASLFLS-CGQVVDCRICGDHKSILRFAFIEFTDAEGARS 184
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
AL SG V GS PIRV SKT + P P
Sbjct: 185 ALRKSGTVFGSHPIRVHISKTAIAPVNP 212
>gi|388522717|gb|AFK49420.1| unknown [Medicago truncatula]
Length = 188
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 158/188 (84%), Positives = 178/188 (94%), Gaps = 1/188 (0%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
+IRRTVYVSDIDQ VTEEQLA+LF+ CGQVVDCR+CGDPNS+LRFAFIEFTDEE ARAA+
Sbjct: 1 MIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAV 60
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+L+GTMLG+YP+RVLPSKTAIAPVNPT LPR+EDEREMC+RTIYCTNIDKK+TQADVK F
Sbjct: 61 SLSGTMLGYYPLRVLPSKTAIAPVNPTSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHF 120
Query: 349 FESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
FES+CGEV+RLRLLGDY HSTRIAFVEF +AESAIAAL+CSGV+LG+LPIRVSPSKTPVR
Sbjct: 121 FESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSCSGVILGALPIRVSPSKTPVR 180
Query: 409 PR-APRLP 415
R +PR P
Sbjct: 181 ARSSPRSP 188
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 221 TSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFI 276
TSL + E E+ RT+Y ++ID+++T+ + F CG+V R+ GD R AF+
Sbjct: 87 TSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFV 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
EF E A AAL+ +G +LG P+RV PSKT +
Sbjct: 147 EFAVAESAIAALSCSGVILGALPIRVSPSKTPV 179
>gi|218198344|gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/314 (56%), Positives = 216/314 (68%), Gaps = 32/314 (10%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHN--- 192
++K D R+L+ELF KLNP AEEFVP + + + + F + ++ F + +
Sbjct: 59 EYKSDARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQ 118
Query: 193 ----------------------ARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII 230
+ +G+ N RR+ SF QG+RRM R RE+ +
Sbjct: 119 QPPPIQVLPVVVGGGGGAGLDSSSDGSTNGQPNRRRRSSFNQGRRRMGGRPRRTDREDSV 178
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 290
RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF D+ GARAAL L
Sbjct: 179 RRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTL 238
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 239 GGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFE 298
Query: 351 SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR-------VSPS 403
+CGEV RLRLLGDY HST IAFVEFV A+SAI AL+CSG+VLG+LP+R VSPS
Sbjct: 299 GMCGEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGALPVRQANTPYAVSPS 358
Query: 404 KTPVRPRAPRLPMH 417
KTPVRPR+PR+ H
Sbjct: 359 KTPVRPRSPRVTSH 372
>gi|226507984|ref|NP_001149092.1| LOC100282713 [Zea mays]
gi|195624680|gb|ACG34170.1| CID11 [Zea mays]
gi|414875767|tpg|DAA52898.1| TPA: CID11 [Zea mays]
Length = 299
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/289 (59%), Positives = 207/289 (71%), Gaps = 20/289 (6%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARN 195
+++ +++L +L S LNP A+EFVP + A + ++ +F+ H+
Sbjct: 18 EYQAGVQKLVDLLSNLNPAAKEFVPSAAASPPKKA----------LSADAPVFDYHSIGG 67
Query: 196 GNVNANAA----------VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 245
GN +AA R QG+RR N R A RE+ IRRTVYVS++D VTE
Sbjct: 68 GNGATDAAFYVGFGHQPRTRGNGYINQGRRRTNGRVRRADREDSIRRTVYVSELDHTVTE 127
Query: 246 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 305
E+LA +F CGQVVDCRICGDP+SVLRFAFIEF+DEEGAR ALNL GT+ GFYPVRVLPS
Sbjct: 128 ERLADIFTTCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPS 187
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
KTAI PVNP FLPRT+DE+EM RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD
Sbjct: 188 KTAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDN 247
Query: 366 HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 248 VHSTRIAFVEFVHAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNRV 296
>gi|242093252|ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/314 (56%), Positives = 212/314 (67%), Gaps = 36/314 (11%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 196
+ D+R+L+ELFSKLNP AEEFVPPS + + ++ F + + H+
Sbjct: 48 YASDIRKLEELFSKLNPSAEEFVPPSRRRVDGGARRLSADAPVFVSPAIDYYARHHQLPP 107
Query: 197 N-----------------------------------VNANAAVRRKKSFGQGKRRMNSRT 221
VN RR+ F QG+RRM
Sbjct: 108 PPLQQQQPMHVLQFVGGVGGGGMGGGGGRDSSSDGSVNGQPNRRRRNGFIQGRRRMMGGR 167
Query: 222 SL-AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
+ RE+ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF D
Sbjct: 168 PRRSDREDSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFAD 227
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
+ GA+AAL L GT+LGFYPV+VLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDKK+
Sbjct: 228 DVGAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKI 287
Query: 341 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+ +VK FFE CGEV RLRLLGDY HST IAFVEFV A+SAI ALNCSG+VLG+LP+RV
Sbjct: 288 GEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAILALNCSGIVLGTLPVRV 347
Query: 401 SPSKTPVRPRAPRL 414
SPSKTPVRPR+PR+
Sbjct: 348 SPSKTPVRPRSPRV 361
>gi|15238531|ref|NP_197832.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
gi|9758532|dbj|BAB08927.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332005928|gb|AED93311.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
Length = 320
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 158/265 (59%), Positives = 202/265 (76%), Gaps = 10/265 (3%)
Query: 144 LQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAA 203
L+ S LNPMA+EFVP LA+T+++ F N F NH +
Sbjct: 59 LKSEISHLNPMAKEFVPSFLAQTHHSE----------FWGNRFWFTNHFPKQTIFLIGQF 108
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI 263
+++FG+G+ + +T+L Q E++I+RTVYVSDID QVTEEQLA+LF+ CGQVVDCR+
Sbjct: 109 ATMRRNFGKGRPWITKKTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRM 168
Query: 264 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 323
CGD S+LRFAFIEFTD EGAR+AL +GTM G +P+RV SKTAIAPVNP+FLP+++DE
Sbjct: 169 CGDYKSILRFAFIEFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDE 228
Query: 324 REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAI 383
E C +T+YCTNIDK+VT+ +++ FF++VCGEV+ LRLLGD++H TRIAFVEF +AESAI
Sbjct: 229 LEKCGKTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAI 288
Query: 384 AALNCSGVVLGSLPIRVSPSKTPVR 408
+ALNCSGVVLG LPIRVSPSKTPVR
Sbjct: 289 SALNCSGVVLGELPIRVSPSKTPVR 313
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
+M RT+Y ++ID +VT+ + F S CG+V R+ GDY R AF+EF AE A +
Sbjct: 133 DMIKRTVYVSDIDNQVTEEQLASLFLS-CGQVVDCRMCGDYKSILRFAFIEFTDAEGARS 191
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
AL SG + GS PIRV SKT + P P
Sbjct: 192 ALRKSGTMFGSHPIRVFMSKTAIAPVNP 219
>gi|449438949|ref|XP_004137250.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
gi|449483120|ref|XP_004156498.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 306
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/277 (60%), Positives = 210/277 (75%), Gaps = 8/277 (2%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVN 199
D +L E+FS LNP+A+EF P S + +H F+ + NN + N + ++
Sbjct: 28 DAHKLAEMFSNLNPLAKEFFPSSYS-----HHDRQDFHFYYQNNNRSLAKNFQVADQLLH 82
Query: 200 ANAAVRRKKSFG-QGKRRMNS-RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CG 256
++ RR+ F QG+RRMN+ R+ AQ+EE IRRTVYVSDID+ V+EE+LA +F CG
Sbjct: 83 SDNNRRRRPEFNNQGRRRMNNNRSVRAQQEESIRRTVYVSDIDKDVSEEELAKVFREFCG 142
Query: 257 QVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTF 316
V DCRICGDP+SVLRFAF+EF +E ARAA+ L+GT++G YPV+VLPSKTAI PVNPTF
Sbjct: 143 YVNDCRICGDPHSVLRFAFVEFANEHSARAAVGLSGTVVGSYPVKVLPSKTAILPVNPTF 202
Query: 317 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 376
LP++ DE +MC RTIYCTNIDKKV+QA+VK FFE+ CGEV RLRLLGD HSTRIAFVEF
Sbjct: 203 LPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAFVEF 262
Query: 377 VMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
+AE+A+ ALNCSG++LG+ PIRVSPSKTPVRPR R
Sbjct: 263 ALAETALQALNCSGMILGAQPIRVSPSKTPVRPRVTR 299
>gi|297829996|ref|XP_002882880.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
gi|297328720|gb|EFH59139.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/282 (59%), Positives = 203/282 (71%), Gaps = 10/282 (3%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVN 199
DM++L +F KLNP+A+EF P NH V N A++ N + + +
Sbjct: 57 DMQKLVAMFKKLNPLAKEFFPSYYDP--KKNHHVGKANQFLSADDFATTNKQSGEEFDPD 114
Query: 200 A--NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQ 257
A + R+++++ QG+RR+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQ
Sbjct: 115 AKKDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQ 174
Query: 258 VVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVL----PSKTAIAPVN 313
VVDCRICGDP+SVLRFAF+EF D++GAR AL+L GTMLGFYPVRV S++ I+
Sbjct: 175 VVDCRICGDPHSVLRFAFVEFADDQGAREALSLGGTMLGFYPVRVKNCHSTSESHISSKG 234
Query: 314 PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 373
+EDEREMC RTIYCTNIDKKV+QADV+ FFES CGEV RLRLLGD HSTRIAF
Sbjct: 235 K--CSDSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAF 292
Query: 374 VEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
VEF +A+SA+ ALNCSG+V+GS PIRVSPSKTPVRPR R P
Sbjct: 293 VEFTLADSALRALNCSGMVVGSQPIRVSPSKTPVRPRITRPP 334
>gi|218190389|gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 176/285 (61%), Positives = 206/285 (72%), Gaps = 19/285 (6%)
Query: 148 FSKLNPMAEEFVPPS----LAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAA 203
SKLNP A+EFVP S + G++ + F + + F A G V +
Sbjct: 1 MSKLNPRAQEFVPSSRRAPPSSAAQAAVGLSA-DAPVFVSAAEYFVGSGAGAGGVGGRDS 59
Query: 204 V--------------RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
RR+ F QG+RR RT A RE+ +RRTVYVSDIDQQVTE++LA
Sbjct: 60 SSDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLA 119
Query: 250 ALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
+F CGQVVDCRICGDP+SVLRFAFIEF D+ GARAAL L GTMLG+YPVRVLPSKTAI
Sbjct: 120 EVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAI 179
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
PVNP FLPRTEDE+EM +RT+YCTNIDKKVT+ DVK+FF+ +CG+V RLRLLGDY HST
Sbjct: 180 LPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHST 239
Query: 370 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
IAFVEF AESAI ALN SG+VLG+LPIRVSPSKTPVRPR+PR+
Sbjct: 240 CIAFVEFAQAESAILALNYSGMVLGTLPIRVSPSKTPVRPRSPRV 284
>gi|115445273|ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa Japonica Group]
Length = 359
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/210 (75%), Positives = 181/210 (86%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 264
RR+ F QG+RR RT A RE+ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 147 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 206
Query: 265 GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 324
GDP+SVLRFAFIEF D+ GARAAL L GTMLG+YPVRVLPSKTAI PVNP FLPRTEDE+
Sbjct: 207 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 266
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
EM +RT+YCTNIDKKVT+ DVK+FF+ +CG+V RLRLLGDY HST IAFVEF AESAI
Sbjct: 267 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAIL 326
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
ALN SG+VLG+LPIRVSPSKTPVRPR+PR+
Sbjct: 327 ALNYSGMVLGTLPIRVSPSKTPVRPRSPRV 356
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 137 FKRDMRELQELFSKLNPMAEEFV 159
+K DMR+L+EL SKLNP A+EFV
Sbjct: 57 YKSDMRKLEELMSKLNPRAQEFV 79
>gi|125581461|gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/210 (75%), Positives = 181/210 (86%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 264
RR+ F QG+RR RT A RE+ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRIC
Sbjct: 87 RRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRIC 146
Query: 265 GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER 324
GDP+SVLRFAFIEF D+ GARAAL L GTMLG+YPVRVLPSKTAI PVNP FLPRTEDE+
Sbjct: 147 GDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDEK 206
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
EM +RT+YCTNIDKKVT+ DVK+FF+ +CG+V RLRLLGDY HST IAFVEF AESAI
Sbjct: 207 EMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAIL 266
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
ALN SG+VLG+LPIRVSPSKTPVRPR+PR+
Sbjct: 267 ALNYSGMVLGTLPIRVSPSKTPVRPRSPRV 296
>gi|414868267|tpg|DAA46824.1| TPA: hypothetical protein ZEAMMB73_802900 [Zea mays]
Length = 328
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/175 (86%), Positives = 163/175 (93%)
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 301
+VTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTD+EGARAALNL+G MLG+YPV
Sbjct: 152 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDDEGARAALNLSGNMLGYYPVN 211
Query: 302 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDK V QAD+KLFFES+CGEV+RLRL
Sbjct: 212 VLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRL 271
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPM 416
LGDYHHSTRIAFVEFVMAESA AALN SGVVLGSLPIRV+PSKTPVRPR PR M
Sbjct: 272 LGDYHHSTRIAFVEFVMAESATAALNSSGVVLGSLPIRVNPSKTPVRPRDPRQLM 326
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E+ RT+Y ++ID+ V + L F CG+V R+ GD + R AF+EF E A A
Sbjct: 235 EMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATA 294
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
ALN +G +LG P+RV PSKT + P +P
Sbjct: 295 ALNSSGVVLGSLPIRVNPSKTPVRPRDP 322
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/255 (63%), Positives = 186/255 (72%), Gaps = 10/255 (3%)
Query: 147 LFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRR 206
+F KLNP A+EF P S K N + + F +I + + + RR
Sbjct: 1 MFKKLNPEAKEFFP-SYKKNTNQSLSSDDF---------VIAKKPSGEDNKKDGINRRRR 50
Query: 207 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 266
+ R+ R S AQRE IRRTVYVSDIDQ VTEE LA LF CGQVVDCRICGD
Sbjct: 51 NNYNQGRRVRLPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRICGD 110
Query: 267 PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 326
PNSVLRFAF+EF+D++GARAAL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR+EDEREM
Sbjct: 111 PNSVLRFAFVEFSDDQGARAALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREM 170
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
C RTIYCTN+DK T+ VK FF+S CGEV RLRLLGD HSTRIAFVEF MAESA+AAL
Sbjct: 171 CTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAAL 230
Query: 387 NCSGVVLGSLPIRVS 401
NCSG+VLGS PIR+S
Sbjct: 231 NCSGIVLGSQPIRLS 245
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y ++ID+ VT+ + F S CG+V R+ GD + R AFVEF + A AAL+
Sbjct: 76 RTVYVSDIDQSVTEEVLAGLFSS-CGQVVDCRICGDPNSVLRFAFVEFSDDQGARAALSL 134
Query: 389 SGVVLGSLPIRVSPSKTPVRPRAP 412
G ++G P+RV PSKT + P P
Sbjct: 135 GGTMIGYYPVRVLPSKTAILPVNP 158
>gi|226530673|ref|NP_001141946.1| uncharacterized protein LOC100274095 [Zea mays]
gi|194706550|gb|ACF87359.1| unknown [Zea mays]
gi|195626910|gb|ACG35285.1| CID11 [Zea mays]
gi|413947723|gb|AFW80372.1| CID11 [Zea mays]
Length = 302
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 207/289 (71%), Gaps = 16/289 (5%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARN 195
+++ +++L +L S LNP A+EFVP S + + ++ +F+ +
Sbjct: 17 EYQAGVQKLVDLLSNLNPAAKEFVPSSAPAAAASPPKKA------LSADAPVFDYRSTAG 70
Query: 196 GNVNANAAV-------RRKKSFG---QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 245
GN + +RK+ G QG+RR N R A RE+ +RRTVYVS++D VTE
Sbjct: 71 GNGATDDPFYVGFGNQQRKRGNGYINQGRRRTNDRLRRADREDSVRRTVYVSELDHTVTE 130
Query: 246 EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 305
E+LA +F CG VVDCRICGDP+SVLRFAFIEF+DEEGAR ALNL GT+ GFYPVRVLPS
Sbjct: 131 ERLADIFATCGHVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPS 190
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
KTAI PVNP FLPRT+DE+EM RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD
Sbjct: 191 KTAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDN 250
Query: 366 HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
HSTRIAFVEFV AE AI ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 251 VHSTRIAFVEFVHAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNRM 299
>gi|212274583|ref|NP_001130716.1| hypothetical protein [Zea mays]
gi|194689926|gb|ACF79047.1| unknown [Zea mays]
gi|413954111|gb|AFW86760.1| hypothetical protein ZEAMMB73_977651 [Zea mays]
Length = 365
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 172/316 (54%), Positives = 210/316 (66%), Gaps = 37/316 (11%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARN 195
+++ DMR+L+EL SKLNP AEEFVP S + + ++ F + + H+
Sbjct: 47 EYESDMRKLEELLSKLNPSAEEFVPQSRRRVDGGAPRLSADAPVFVSPAIDYYARHHQLP 106
Query: 196 GN------------------------------------VNANAAVRRKKSFGQGKRRM-N 218
N RR+ F QG+RRM
Sbjct: 107 PPPLLQQQQPMHVLQFVGGVGGVGMGGGGGMDSSSDGSANGQPNRRRRNGFIQGRRRMMG 166
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF 278
+R A RE+ +RRTVYVSD+DQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF
Sbjct: 167 ARPRRADREDSVRRTVYVSDVDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEF 226
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
D+ A+AAL L GT+LGFYPV+VLPSKTAI PVNP FLP T+DE+EM +RT+YCTNIDK
Sbjct: 227 ADDVAAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPHTDDEKEMVSRTVYCTNIDK 286
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
K+ + +VK FFE CGEV RLRLLGDY HST IAFVEFV A+SAI ALNCSG+VLG+LP+
Sbjct: 287 KIAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAILALNCSGIVLGTLPV 346
Query: 399 RVSPSKTPVRPRAPRL 414
RVSPSKTPVR R+PR+
Sbjct: 347 RVSPSKTPVRSRSPRV 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 377
PR D + RT+Y +++D+ VT+ + F S CG+V R+ GD + R AF+EF
Sbjct: 169 PRRADREDSVRRTVYVSDVDQHVTEQKLAEVF-STCGQVVDCRICGDPNSVLRFAFIEFA 227
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
+A AAL G VLG P++V PSKT + P P+ H
Sbjct: 228 DDVAAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPH 267
>gi|62867578|emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
Length = 201
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/201 (77%), Positives = 172/201 (85%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 276
MN+R AQRE+ IRRTVYV++ID VTEEQLAALF GQVVDCRICGDP+S LRFAF+
Sbjct: 1 MNNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFV 60
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
EF DE ARAAL+L GT+LGF P++VLPSKTAI PVNPTFLPR+EDEREMCART+YCTNI
Sbjct: 61 EFADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 120
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
DKKVTQADVK FFE+ CGEV RLRLLGD+ HSTRIAFVEFVMAESAI AL+C G +LGS
Sbjct: 121 DKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQ 180
Query: 397 PIRVSPSKTPVRPRAPRLPMH 417
IRVSPSKTPVRPR PR M
Sbjct: 181 RIRVSPSKTPVRPRLPRAMMQ 201
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/257 (62%), Positives = 186/257 (72%), Gaps = 19/257 (7%)
Query: 147 LFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRR 206
+F KLNP A+EF P TN ++ V +G N A+ R
Sbjct: 1 MFKKLNPEAKEFFPSYKRNTNQSDDFVIAIK----------------PSGEDNKKVAINR 44
Query: 207 KKSFGQGKR---RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI 263
++ + R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF CGQVVDCRI
Sbjct: 45 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 104
Query: 264 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 323
CGDPNSVLRFAF+EF+D++GAR+AL+L GTM+G+YPVRVLPSKTAI PVNPTFLPR+EDE
Sbjct: 105 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 164
Query: 324 REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAI 383
REMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF MAESA+
Sbjct: 165 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 224
Query: 384 AALNCSGVVLGSLPIRV 400
AALNCSG+VLGS PI V
Sbjct: 225 AALNCSGIVLGSQPISV 241
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y ++ID+ VT+ + F S CG+V R+ GD + R AFVEF + A +AL+
Sbjct: 73 RTVYVSDIDQSVTEEGLAGLFSS-CGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSL 131
Query: 389 SGVVLGSLPIRVSPSKTPVRPRAP 412
G ++G P+RV PSKT + P P
Sbjct: 132 GGTMIGYYPVRVLPSKTAILPVNP 155
>gi|212274823|ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/316 (53%), Positives = 204/316 (64%), Gaps = 38/316 (12%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 196
+K D+++L+ L SKLNP A+EFVP S G + ++ +F + G
Sbjct: 61 YKSDLKKLENLMSKLNPCAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYG 120
Query: 197 NVNANAAV-------------------------------------RRKKSFGQGKRRMNS 219
+ + RR+ SF G+RR
Sbjct: 121 AAGGHLEIGGGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAG 180
Query: 220 RTSLAQR-EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEF 278
E+ +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAFIEF
Sbjct: 181 GRPRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEF 240
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
+D+ GARAAL LAGT+LG YPVRVLPSKTAI PVNP FLP+T+DE+EM +RT+YCTNIDK
Sbjct: 241 SDDGGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDK 300
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
KVT+ DVK FF+ CG+V RLRLL D HST IAFVEF AESAI ALN SG+VLGSLPI
Sbjct: 301 KVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPI 360
Query: 399 RVSPSKTPVRPRAPRL 414
RVSPSKTPVRPR+PR+
Sbjct: 361 RVSPSKTPVRPRSPRV 376
>gi|195626410|gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/314 (53%), Positives = 204/314 (64%), Gaps = 36/314 (11%)
Query: 137 FKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNG 196
+K D+++L+ L SKLNP A+EFVP S G + ++ +F + G
Sbjct: 62 YKSDLKKLENLMSKLNPSAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYG 121
Query: 197 NVNANAAV-----------------------------------RRKKSFGQGKRRMNSRT 221
+ + RR+ SF G+RR
Sbjct: 122 AAGGHLEIGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAGGR 181
Query: 222 SLAQR-EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
E+ +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAFIEF+D
Sbjct: 182 PRRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSD 241
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
+ GARAAL LAGT+LG YPVRVLPSKTAI PVNP FLP+T+DE+EM +RT+YCTNIDKKV
Sbjct: 242 DAGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKV 301
Query: 341 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
T+ DVK FF+ CG+V RLRLL D HST IAFVEF AESAI ALN SG+VLGSLPIRV
Sbjct: 302 TEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPIRV 361
Query: 401 SPSKTPVRPRAPRL 414
SPSKTPVRPR+PR+
Sbjct: 362 SPSKTPVRPRSPRV 375
>gi|222635710|gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/287 (56%), Positives = 198/287 (68%), Gaps = 25/287 (8%)
Query: 136 DFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHN--- 192
++K D R+L+ELF KLNP AEEFVP + + + + F + ++ F + +
Sbjct: 56 EYKSDARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQ 115
Query: 193 ----------------------ARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII 230
+ +G+ N RR+ SF QG+RRM R RE+ +
Sbjct: 116 QPPPIQVLPVVVGGGGGAGLDSSSDGSTNGQPNRRRRSSFNQGRRRMGGRPRRTDREDSV 175
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 290
RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFIEF D+ GARAAL L
Sbjct: 176 RRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTL 235
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE
Sbjct: 236 GGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFE 295
Query: 351 SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLP 397
+CGEV RLRLLGDY HST IAFVEFV A+SAI AL+CSG+VLG+LP
Sbjct: 296 GMCGEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGALP 342
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES 381
D + RT+Y ++ID+ VT+ + F S CG+V R+ GD + R AF+EF
Sbjct: 170 DREDSVRRTVYVSDIDQHVTEQKLAEVF-SNCGQVVDCRICGDPNSVLRFAFIEFADDVG 228
Query: 382 AIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
A AAL G VLG P+RV PSKT + P P+
Sbjct: 229 ARAALTLGGTVLGYYPVRVLPSKTAILPVNPKF 261
>gi|147818437|emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
Length = 642
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 155/176 (88%)
Query: 206 RKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG 265
R+ ++ QG+RR++ R AQRE+ IRRTVYVSDIDQ VTEE+LAALF CGQVVDCR+CG
Sbjct: 324 RRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCG 383
Query: 266 DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDERE 325
DP+SVLRFAF+EF DE GARAALNL GTMLG+YPVRVLPSKTAI PVNPTFLPR+EDERE
Sbjct: 384 DPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDERE 443
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES 381
MCART+YCTNIDKKV+QA+VK FFE CGEV RLRLLGD+ HSTRIAFVEF M +S
Sbjct: 444 MCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMGQS 499
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y ++ID+ VT+ + F S CG+V R+ GD H R AFVEF A AALN
Sbjct: 350 RTVYVSDIDQHVTEERLAALFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 408
Query: 389 SGVVLGSLPIRVSPSKTPVRPRAP 412
G +LG P+RV PSKT + P P
Sbjct: 409 GGTMLGYYPVRVLPSKTAILPVNP 432
>gi|413921445|gb|AFW61377.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 315
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/249 (63%), Positives = 180/249 (72%), Gaps = 25/249 (10%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGFF 181
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 182 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 232
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+G
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSG 216
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 352
T+LG+YPV+VLPSKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+
Sbjct: 217 TVLGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESI 276
Query: 353 CGEVYRLRL 361
CGEV R L
Sbjct: 277 CGEVGRSLL 285
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF E A A
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 210
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRP 409
ALN SG VLG P++V PSKT + P
Sbjct: 211 ALNLSGTVLGYYPVKVLPSKTAIAP 235
>gi|224106628|ref|XP_002333653.1| predicted protein [Populus trichocarpa]
gi|222837945|gb|EEE76310.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 134/157 (85%), Positives = 150/157 (95%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 282
+AQ+EEI+RRTVYVSDIDQQVTEEQLAALF+ CGQVVDCRICGDP SVLRFAFIEFTDEE
Sbjct: 1 MAQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEE 60
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
GA+AAL+L+GTMLG+YPV+VLPSKTAIAPVNPTFLPR +DEREMCARTIYCTNID+ +TQ
Sbjct: 61 GAQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQ 120
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMA 379
A++KLFFES+CGEVY LRLLGD+HH TRIAFVEFVM
Sbjct: 121 ANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMV 157
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 323 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA 382
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD R AF+EF E A
Sbjct: 4 QEEIVRRTVYVSDIDQQVTEEQLAALFIN-CGQVVDCRICGDPKSVLRFAFIEFTDEEGA 62
Query: 383 IAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
AAL+ SG +LG P++V PSKT + P P
Sbjct: 63 QAALSLSGTMLGYYPVKVLPSKTAIAPVNP 92
>gi|53793069|dbj|BAD54280.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|53793076|dbj|BAD54286.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 206
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/181 (74%), Positives = 151/181 (83%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFI 276
M R RE+ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAFI
Sbjct: 1 MGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFI 60
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
EF D+ GARAAL L GT+LG+YPVRVLPSKTAI PVNP FLPRTEDE+EM +RT+YCTNI
Sbjct: 61 EFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNI 120
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
DK V + VK FFE +CGEV RLRLLGDY HST IAFVEFV A+SAI AL+CSG+VLG+L
Sbjct: 121 DKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGAL 180
Query: 397 P 397
P
Sbjct: 181 P 181
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 377
PR D + RT+Y ++ID+ VT+ + F S CG+V R+ GD + R AF+EF
Sbjct: 5 PRRTDREDSVRRTVYVSDIDQHVTEQKLAEVF-SNCGQVVDCRICGDPNSVLRFAFIEFA 63
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
A AAL G VLG P+RV PSKT + P P+
Sbjct: 64 DDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKF 100
>gi|413941690|gb|AFW74339.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 286
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/220 (65%), Positives = 165/220 (75%), Gaps = 18/220 (8%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGFFANNSLIFNNHNARNG 196
+R+MR+L++L SKLNPMAEEFVPPSLA ++ GF+ + F + +G
Sbjct: 33 EREMRDLEDLLSKLNPMAEEFVPPSLASPAALTPAPLSPAAYGFYPAGAG-FAVASPGHG 91
Query: 197 NVNANAAVRRKKSF-------------GQG---KRRMNSRTSLAQREEIIRRTVYVSDID 240
V AV + G G +RR NSRTS+AQR+EIIRRTVYVSDID
Sbjct: 92 GVVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDID 151
Query: 241 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YPV
Sbjct: 152 HQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPV 211
Query: 301 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
RVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKV
Sbjct: 212 RVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKV 251
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
E+ RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF E A A
Sbjct: 139 EIIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 197
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
ALN SG VLG P+RV PSKT + P P
Sbjct: 198 ALNLSGTVLGYYPVRVLPSKTAIAPVNP 225
>gi|326508995|dbj|BAJ86890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/169 (76%), Positives = 145/169 (85%)
Query: 249 AALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTA 308
A +F CGQVVDCRICGDPNSV+RFAFIEF D+ GARAAL L GT+LGFYPVRVLPSKTA
Sbjct: 1 AEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTVLGFYPVRVLPSKTA 60
Query: 309 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 368
I PVNP FLPRTEDE+EM +RT+YCTNIDK V + VK FFE +CGEV RLRLLGDY H+
Sbjct: 61 ILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHA 120
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
T IAFVEFV AE AI ALNCSG++LGSLP+RVSPSKTPVRPR+PR+ H
Sbjct: 121 TCIAFVEFVEAEGAILALNCSGMLLGSLPVRVSPSKTPVRPRSPRVVSH 169
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 285
+E++ RTVY ++ID+ V E+ + F G CG+V R+ GD AF+EF + EGA
Sbjct: 76 KEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGAI 135
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
ALN +G +LG PVRV PSKT + P +P
Sbjct: 136 LALNCSGMLLGSLPVRVSPSKTPVRPRSP 164
>gi|413916285|gb|AFW56217.1| hypothetical protein ZEAMMB73_723080 [Zea mays]
Length = 246
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/143 (88%), Positives = 135/143 (94%), Gaps = 4/143 (2%)
Query: 240 DQQ----VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTML 295
DQQ VTEE LAALF+ CGQVVDC +CGDPNSVLRF FIEFTDEEGARAALNL+GTML
Sbjct: 16 DQQIVFKVTEENLAALFINCGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTML 75
Query: 296 GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGE 355
G+YPVRVLPSKTAIAPVNPTFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGE
Sbjct: 76 GYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 135
Query: 356 VYRLRLLGDYHHSTRIAFVEFVM 378
V+RLRLLGDYHHSTRIAFVEFVM
Sbjct: 136 VFRLRLLGDYHHSTRIAFVEFVM 158
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
KVT+ ++ F + CG+V + GD + R F+EF E A AALN SG +LG P+
Sbjct: 22 KVTEENLAALFIN-CGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTMLGYYPV 80
Query: 399 RVSPSKTPVRPRAP 412
RV PSKT + P P
Sbjct: 81 RVLPSKTAIAPVNP 94
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFT 279
E+ RT+Y ++ID++VT+ L F CG+V R+ GD + R AF+EF
Sbjct: 105 EMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFV 157
>gi|159464635|ref|XP_001690547.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158280047|gb|EDP05806.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 464
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/198 (64%), Positives = 150/198 (75%)
Query: 211 GQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV 270
G G++ + EE IRRTVY+S +D +TEE LAA F CG+++DCRICGDPNS
Sbjct: 174 GPGQQAQKKKRPQKGLEENIRRTVYISYVDCSLTEENLAAFFSDCGRILDCRICGDPNSA 233
Query: 271 LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART 330
+RFAFIEF D E A AL G++LG P+RVLPSKTAI PVN +PR+ DE E C+RT
Sbjct: 234 MRFAFIEFMDVECAAKALEKTGSVLGNSPLRVLPSKTAIMPVNQELMPRSADEVERCSRT 293
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG 390
+Y NIDKKV + DVK FFES+CG+V R+RLLGDY HSTRIAFVEF AE A+AALNCSG
Sbjct: 294 VYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEFHHAEGALAALNCSG 353
Query: 391 VVLGSLPIRVSPSKTPVR 408
+LGSLPIRVSPSKTPVR
Sbjct: 354 ALLGSLPIRVSPSKTPVR 371
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y + +D +T+ ++ FF S CG + R+ GD + + R AF+EF+ E A AL
Sbjct: 195 RTVYISYVDCSLTEENLAAFF-SDCGRILDCRICGDPNSAMRFAFIEFMDVECAAKALEK 253
Query: 389 SGVVLGSLPIRVSPSKTPVRP 409
+G VLG+ P+RV PSKT + P
Sbjct: 254 TGSVLGNSPLRVLPSKTAIMP 274
>gi|302830029|ref|XP_002946581.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
gi|300268327|gb|EFJ52508.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
Length = 238
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 145/182 (79%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE I+RTVY+S +D +TEE LAA F CG++VDCRICGDPNS +RFAFIEF D E A
Sbjct: 12 EENIKRTVYISYVDCTLTEENLAAFFSDCGRIVDCRICGDPNSAMRFAFIEFADVEFATK 71
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL G++LG P+RVLPSKTAI PVN +PR+ DE E C+RT+Y NIDKKV + DV+
Sbjct: 72 ALEKTGSVLGKSPLRVLPSKTAIMPVNQELMPRSPDEVERCSRTVYAANIDKKVDKNDVR 131
Query: 347 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP 406
FFES+CG+V R+RLLGDY HSTRIAFVEF AE A+AALNCSG +LGSLPIRVSPSKTP
Sbjct: 132 AFFESLCGKVSRIRLLGDYAHSTRIAFVEFQHAEGALAALNCSGALLGSLPIRVSPSKTP 191
Query: 407 VR 408
V+
Sbjct: 192 VK 193
>gi|222641306|gb|EEE69438.1| hypothetical protein OsJ_28831 [Oryza sativa Japonica Group]
Length = 353
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/261 (51%), Positives = 165/261 (63%), Gaps = 21/261 (8%)
Query: 150 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 209
+LNP A EF + + + NG + H +R G+ N +
Sbjct: 96 RLNPDAPEFTAAASIRRRRSPGSGNGISS----------TRHWSRRGSRNFSR------- 138
Query: 210 FGQGKRR-MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDP 267
QG+ +SR AQ+EE +RRT++VSDID VTE+ LA LF C VVDCRICGD
Sbjct: 139 --QGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDH 196
Query: 268 NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
+S LRFAFIEF DE A AAL+L G +LG P+RV PSKTAI PVNP+FLP++E EREMC
Sbjct: 197 SSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLPQSEAEREMC 256
Query: 328 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
+RTIYCTNIDK V D+K F E G+V+RL+LLGD H TRIAF+EF + AI ALN
Sbjct: 257 SRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAINALN 316
Query: 388 CSGVVLGSLPIRVSPSKTPVR 408
SG+ PIRV PSKTP+R
Sbjct: 317 SSGIFASGQPIRVCPSKTPIR 337
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGC----GQVVDCRICGDPNSVLRFAFIEFTDEEG 283
E+ RT+Y ++ID+ V L C GQV ++ GD R AFIEF + +G
Sbjct: 254 EMCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDG 310
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPV 312
A ALN +G P+RV PSKT I V
Sbjct: 311 AINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|218201903|gb|EEC84330.1| hypothetical protein OsI_30837 [Oryza sativa Indica Group]
Length = 353
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/260 (51%), Positives = 163/260 (62%), Gaps = 19/260 (7%)
Query: 150 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 209
+LNP A EF + + + NG + H +R G+ N + R
Sbjct: 96 RLNPDAPEFTAAASIRRRRSPGSGNGISS----------TRHWSRRGSRNFSRQGRSAP- 144
Query: 210 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPN 268
+SR AQ+EE +RRT++VSDID VTE+ LA LF C VVDCRICGD +
Sbjct: 145 -------FSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHS 197
Query: 269 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA 328
S LRFAFIEF DE A AAL+L G +LG P+RV PSKTAI PVNP+FLP++E EREMC+
Sbjct: 198 SGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLPQSEAEREMCS 257
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RTIYCTNIDK V D+K F E G+V+RL+LLGD H TRIAF+EF + AI ALN
Sbjct: 258 RTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAINALNS 317
Query: 389 SGVVLGSLPIRVSPSKTPVR 408
SG+ PIRV PSKTP+R
Sbjct: 318 SGIFASGQPIRVCPSKTPIR 337
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGC----GQVVDCRICGDPNSVLRFAFIE 277
S A+RE + RT+Y ++ID+ V L C GQV ++ GD R AFIE
Sbjct: 249 SEAERE-MCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIE 304
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 312
F + +GA ALN +G P+RV PSKT I V
Sbjct: 305 FAEVDGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|307105908|gb|EFN54155.1| hypothetical protein CHLNCDRAFT_13101, partial [Chlorella
variabilis]
Length = 187
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 141/182 (77%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE +R TVY+SDI VTE QLAA F CGQ+VDCR+CGDPNS +RFAFIEF E+ A+
Sbjct: 6 EEKVRCTVYISDISDTVTEAQLAAFFQDCGQLVDCRVCGDPNSSMRFAFIEFMQEDSAQQ 65
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL +G MLG +P+RV PSKTAI PVN T+LPR+ +ERE+ ART++ NID+ V + +
Sbjct: 66 ALGKSGAMLGDFPIRVSPSKTAIVPVNNTYLPRSTEERELVARTVFVGNIDRVVEREQLS 125
Query: 347 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP 406
FF+++CG V ++RLLGD HS +IAF+EFV AESA AAL SG +LG+LP+RVSPSKTP
Sbjct: 126 EFFQNLCGPVSKIRLLGDSQHSAKIAFIEFVTAESARAALKLSGALLGTLPLRVSPSKTP 185
Query: 407 VR 408
VR
Sbjct: 186 VR 187
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
R +E+ C T+Y ++I VT+A + FF+ CG++ R+ GD + S R AF+EF+
Sbjct: 3 RRNEEKVRC--TVYISDISDTVTEAQLAAFFQD-CGQLVDCRVCGDPNSSMRFAFIEFMQ 59
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPVRP 409
+SA AL SG +LG PIRVSPSKT + P
Sbjct: 60 EDSAQQALGKSGAMLGDFPIRVSPSKTAIVP 90
>gi|384248219|gb|EIE21704.1| hypothetical protein COCSUDRAFT_56895 [Coccomyxa subellipsoidea
C-169]
Length = 231
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 165/259 (63%), Gaps = 35/259 (13%)
Query: 150 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 209
+LNP A+EFVPP NGF + + +++ + +V+A
Sbjct: 5 RLNPGAKEFVPPG-----------NGFQ--------VSWQSYSFQKQDVSA--------- 36
Query: 210 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 269
G R S +R+ +++ VTE LA +F G++VDCR+CGDPNS
Sbjct: 37 --PGSLHTFQRQSRPRRKAALQK-----QFGGNVTEAALADVFKHSGKIVDCRVCGDPNS 89
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
+RFAFIEF DEE + A+ L GTMLG +P+RV+PSKTAI PVN +FLPRT++E E CAR
Sbjct: 90 AMRFAFIEFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVPVNNSFLPRTQEELERCAR 149
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCS 389
T+Y NIDKKV + +V++FF+++CG V ++RLL DY+H + IAFVEF +SA AL+CS
Sbjct: 150 TVYIANIDKKVDREEVRVFFQTLCGPVTKIRLLSDYNHVSSIAFVEFADFKSARKALDCS 209
Query: 390 GVVLGSLPIRVSPSKTPVR 408
G +LGSLPIRV+PSK PVR
Sbjct: 210 GALLGSLPIRVTPSKAPVR 228
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR 399
VT+A + F+ G++ R+ GD + + R AF+EF E+ A+ +G +LG PIR
Sbjct: 63 VTEAALADVFKH-SGKIVDCRVCGDPNSAMRFAFIEFADEEAIQRAIKLNGTMLGKFPIR 121
Query: 400 VSPSKTPVRP 409
V PSKT + P
Sbjct: 122 VMPSKTAIVP 131
>gi|388517685|gb|AFK46904.1| unknown [Lotus japonicus]
Length = 124
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/124 (85%), Positives = 119/124 (95%)
Query: 294 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 353
MLG+YP+RVLPSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ+DVK FFES+C
Sbjct: 1 MLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQSDVKNFFESIC 60
Query: 354 GEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
GEV RLRLLGD++HSTRIAFVEF +AESAIAAL+CSGV+LGSLPIRVSPSKTPVR R+PR
Sbjct: 61 GEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRSPR 120
Query: 414 LPMH 417
PMH
Sbjct: 121 SPMH 124
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E+ RT+Y ++ID+++T+ + F CG+V R+ GD N R AF+EF E A A
Sbjct: 32 EMCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESAIA 91
Query: 287 ALNLAGTMLGFYPVRVLPSKTAI 309
AL+ +G +LG P+RV PSKT +
Sbjct: 92 ALSCSGVILGSLPIRVSPSKTPV 114
>gi|227204205|dbj|BAH56954.1| AT4G10610 [Arabidopsis thaliana]
Length = 206
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 149/219 (68%), Gaps = 38/219 (17%)
Query: 81 MAVVESASQDSAVSSAGSIP-------------ASNGQDHPKQNGGTMVMPLDQGLYNQ- 126
MAV+ES ++ V + G I AS+ DH GG G++++
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDH----GGN-------GIHDEI 49
Query: 127 --NNQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFA-N 183
+ RS+GG FKRDMREL EL SKLNPMA+EF+PPSL K VNGFNGGFFA N
Sbjct: 50 GVHVARSDGGESFKRDMRELHELLSKLNPMAKEFIPPSLTKPV-----VNGFNGGFFAVN 104
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQ-GKRRMNSRTSLAQREEIIRRTVYVSDIDQQ 242
N + A N VN + + RRKKSFGQ GKRRMN RTSLAQREEIIRRTVYVSDIDQQ
Sbjct: 105 NGFV----AAGNFPVNEDGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQ 160
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE 281
VTEEQLA LF+G GQVVDCRICGDPNSVLRFAFIEFTDE
Sbjct: 161 VTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDE 199
>gi|116789825|gb|ABK25401.1| unknown [Picea sitchensis]
Length = 124
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/124 (83%), Positives = 114/124 (91%)
Query: 294 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 353
MLG+YPVRVLPSKTAI PVNPTFLPR+EDEREMCARTIYCTNIDKKV+Q +V++FFES+C
Sbjct: 1 MLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLC 60
Query: 354 GEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
GEV RLRLLGD+ HSTRIAFVEFVMAESAI ALNCSG ++GSLPIRVSPSKTPVRPR P
Sbjct: 61 GEVSRLRLLGDHVHSTRIAFVEFVMAESAILALNCSGAIVGSLPIRVSPSKTPVRPRIPH 120
Query: 414 LPMH 417
MH
Sbjct: 121 PTMH 124
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E+ RT+Y ++ID++V++ ++ F CG+V R+ GD R AF+EF E A
Sbjct: 32 EMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIL 91
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
ALN +G ++G P+RV PSKT + P P
Sbjct: 92 ALNCSGAIVGSLPIRVSPSKTPVRPRIP 119
>gi|384245723|gb|EIE19216.1| hypothetical protein COCSUDRAFT_38408 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 129/174 (74%)
Query: 235 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 294
+ S Q+VTE LA +F G++VDCR+CGDPNS +RFAFIEF DE + A+ L G
Sbjct: 24 WQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAK 83
Query: 295 LGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCG 354
LG YP+RV+PSKTAI PVN +FLPRT+ E E CART+Y NIDK+V + DV+ FFE++CG
Sbjct: 84 LGKYPIRVMPSKTAIVPVNTSFLPRTQKELECCARTVYVANIDKRVDREDVRQFFETLCG 143
Query: 355 EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
V ++RLL DY+ + IAFVEF +SA AL+CSG +LG LPIRV+PSK PVR
Sbjct: 144 PVKKIRLLSDYNKVSSIAFVEFAGFDSARKALDCSGALLGMLPIRVTPSKAPVR 197
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 40/195 (20%)
Query: 151 LNPMAEEFVPP-------------------SLAKTNNNNHGVNGFNGGFFANNSL----- 186
LNP A+EFVPP SLA ++ + N+++
Sbjct: 6 LNPSAKEFVPPGKGFQESWQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFI 65
Query: 187 IFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLA----------QRE-EIIRRTVY 235
F + A + N A K R M S+T++ Q+E E RTVY
Sbjct: 66 EFADERAVQQAIKLNGAKLGKYPI----RVMPSKTAIVPVNTSFLPRTQKELECCARTVY 121
Query: 236 VSDIDQQVTEEQLAALF-VGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 294
V++ID++V E + F CG V R+ D N V AF+EF + AR AL+ +G +
Sbjct: 122 VANIDKRVDREDVRQFFETLCGPVKKIRLLSDYNKVSSIAFVEFAGFDSARKALDCSGAL 181
Query: 295 LGFYPVRVLPSKTAI 309
LG P+RV PSK +
Sbjct: 182 LGMLPIRVTPSKAPV 196
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 338 KKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLP 397
+KVT+A + F+ G++ R+ GD + + R AF+EF + A+ +G LG P
Sbjct: 30 QKVTEASLADVFKD-SGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAKLGKYP 88
Query: 398 IRVSPSKTPVRP 409
IRV PSKT + P
Sbjct: 89 IRVMPSKTAIVP 100
>gi|413952071|gb|AFW84720.1| hypothetical protein ZEAMMB73_482719 [Zea mays]
Length = 625
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 108/115 (93%)
Query: 241 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
QVTEE LAALF+ GQVVDC +CGDPNSVL+FAFIEFTDEEGAR ALNL+GT+L +YPV
Sbjct: 308 HQVTEENLAALFINYGQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 301 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGE 355
RVLPSKTAIAPVNPTF+PR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGE
Sbjct: 368 RVLPSKTAIAPVNPTFVPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 422
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
+VT+ ++ F + G+V + GD + + AF+EF E A ALN SG VL P+
Sbjct: 309 QVTEENLAALFINY-GQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 399 RVSPSKTPVRPRAP 412
RV PSKT + P P
Sbjct: 368 RVLPSKTAIAPVNP 381
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 111/119 (93%)
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 301
+VTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+GT+LG+YP+
Sbjct: 39 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPIN 98
Query: 302 VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 360
VL SKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 99 VLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGELKVCR 157
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
+VT+ ++ F + CG+V R+ GD + R AF+EF E A AALN SG VLG PI
Sbjct: 39 EVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPI 97
Query: 399 RVSPSKTPVRP 409
V SKT + P
Sbjct: 98 NVLLSKTAIAP 108
>gi|413943210|gb|AFW75859.1| putative ubiquitin-conjugating enzyme family [Zea mays]
Length = 699
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 113/141 (80%), Gaps = 20/141 (14%)
Query: 238 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGF 297
D+ QVTEE LAALF+ CGQVVDCR+CGDPNSVLRF FIEFTDEEGARAALNL+GT+L +
Sbjct: 482 DLFCQVTEENLAALFINCGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRY 541
Query: 298 YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 357
YPV VLPSKT IAPVNPTFLPR VTQAD+KLFFES+CGEV+
Sbjct: 542 YPVSVLPSKTVIAPVNPTFLPR--------------------VTQADLKLFFESICGEVF 581
Query: 358 RLRLLGDYHHSTRIAFVEFVM 378
RLRLLGDYHHSTRIAFVEFVM
Sbjct: 582 RLRLLGDYHHSTRIAFVEFVM 602
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
+VT+ ++ F + CG+V R+ GD + R F+EF E A AALN SG VL P+
Sbjct: 486 QVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRYYPV 544
Query: 399 RVSPSKTPVRPRAP 412
V PSKT + P P
Sbjct: 545 SVLPSKTVIAPVNP 558
>gi|414884994|tpg|DAA61008.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 295
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 127/187 (67%), Gaps = 2/187 (1%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 281
+Q +E ++RT++V ID VTE+ LA LF G VVDCRICGDP S LRF F+E E
Sbjct: 100 SQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTVVDCRICGDPTSDDGLRFGFVELQHE 159
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
+ A A+L+L G ++ P+ V S+TAI P+NP FLP++E E E C RTIYCTNI K VT
Sbjct: 160 DEAIASLDLDGYIISVSPLSVSRSRTAICPINPKFLPQSEAEWETCLRTIYCTNISKNVT 219
Query: 342 QADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
++++ F E+ G+V R+RLL + ST IAF+EFV AIAAL G+ + +PIR+
Sbjct: 220 SSNLRSFCEAYFGKVCRVRLLDNKERSTNIAFIEFVEVYGAIAALGSGGIYVDGVPIRMC 279
Query: 402 PSKTPVR 408
PSK+P+R
Sbjct: 280 PSKSPIR 286
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 314 PTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTR 370
PTF + E RTI+ ID VT+ + F+ + G V R+ GD R
Sbjct: 92 PTFFKSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQ-LFGTVVDCRICGDPTSDDGLR 150
Query: 371 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
FVE + AIA+L+ G ++ P+ VS S+T + P P+
Sbjct: 151 FGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPINPKF 194
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 93/104 (89%)
Query: 257 QVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTF 316
VVDCR+CGDPNSVLRFAFIEF DEEGARAA NL+ T+LG+YPV VLPSKTAIAPVN TF
Sbjct: 131 HVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYYPVNVLPSKTAIAPVNETF 190
Query: 317 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 360
LPR++DEREMCA TIYCTNIDKKVTQAD+ LFFES+CGE+ R
Sbjct: 191 LPRSDDEREMCASTIYCTNIDKKVTQADLNLFFESICGELKVCR 234
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 347 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP 406
+F + V R+ GD + R AF+EF E A AA N S VLG P+ V PSKT
Sbjct: 123 VFHLHISPHVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYYPVNVLPSKTA 182
Query: 407 VRP 409
+ P
Sbjct: 183 IAP 185
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 107/155 (69%), Gaps = 19/155 (12%)
Query: 216 RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--- 272
RM+SR + R +YV VTEE L ALF+ CGQVVDC +CGDPN VL
Sbjct: 72 RMSSRCVITCR-------LYVQG--WMVTEENLVALFINCGQVVDCHMCGDPNLVLSLLT 122
Query: 273 -------FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDERE 325
+ EGARAALNL+GT+LG+YPV VLPSKTAIAPVN TFLPR+ DE E
Sbjct: 123 LCNGSTIYGVKNIDVPEGARAALNLSGTVLGYYPVNVLPSKTAIAPVNETFLPRSNDEHE 182
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 360
MCARTIYCTNIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 183 MCARTIYCTNIDKKVTQADLKLFFESICGELKVCR 217
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 345 VKLFFESVCGEVYRLRLLGD----------YHHSTRIAFVEFVMAESAIAALNCSGVVLG 394
V LF CG+V + GD + ST + E A AALN SG VLG
Sbjct: 96 VALFIN--CGQVVDCHMCGDPNLVLSLLTLCNGSTIYGVKNIDVPEGARAALNLSGTVLG 153
Query: 395 SLPIRVSPSKTPVRP 409
P+ V PSKT + P
Sbjct: 154 YYPVNVLPSKTAIAP 168
>gi|50726388|dbj|BAD33999.1| RNA-binding protein-like [Oryza sativa Japonica Group]
Length = 316
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 137/251 (54%), Gaps = 39/251 (15%)
Query: 150 KLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAVRRKKS 209
+LNP A EF + + + NG + H +R G+ N + R
Sbjct: 96 RLNPDAPEFTAAASIRRRRSPGSGNGISS----------TRHWSRRGSRNFSRQGRSAP- 144
Query: 210 FGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPN 268
+SR AQ+EE +RRT++VSDID VTE+ LA LF C VVDCRICGD +
Sbjct: 145 -------FSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHS 197
Query: 269 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA 328
S LRFAFIEF DE A AAL+L G +LG P+RV PSKTAI PVNP+FLP
Sbjct: 198 SGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNPSFLP---------- 247
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
+V D+K F E G+V+RL+LLGD H TRIAF+EF + AI ALN
Sbjct: 248 ----------QVNVTDLKYFCEEHFGQVFRLKLLGDDGHPTRIAFIEFAEVDGAINALNS 297
Query: 389 SGVVLGSLPIR 399
SG+ PIR
Sbjct: 298 SGIFASGQPIR 308
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
>gi|242044320|ref|XP_002460031.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
gi|241923408|gb|EER96552.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
Length = 288
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 129/223 (57%), Gaps = 25/223 (11%)
Query: 193 ARNGNVNANAAVRRKKSFGQGKRRMNS------RTSLAQREEIIRRTVYVSDIDQQVTEE 246
AR N A RR S ++ NS ++ +Q +E ++RT++V ID VTEE
Sbjct: 63 ARPNNSGTGRAARRPAS--NSRQDANSPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEE 120
Query: 247 QLAALFVGCGQVVDCRICGDPNSV-LRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS 305
LA +F G VVDCRICG P S LRF F+E E+ A A+L+L G+++G V V S
Sbjct: 121 TLACMFRLFGTVVDCRICGHPTSGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRS 180
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
+TAI P+NP FLP++E E E C RTIYCT+I K V RL+LL +
Sbjct: 181 RTAICPINPKFLPQSEAEWETCLRTIYCTSISKIVC----------------RLKLLDNG 224
Query: 366 HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
ST IAF+EF + AIAAL G+ + +PIR+ PSK+P+R
Sbjct: 225 ERSTNIAFIEFAEVDGAIAALMSGGIYVDGIPIRMCPSKSPIR 267
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
+P N F E RTI+ ID VT+ + F + G V R+ G H T
Sbjct: 87 SPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEETLACMFR-LFGTVVDCRICG---HPT 142
Query: 370 ----RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
R FVE + A+A+L+ G ++G + VS S+T + P P+
Sbjct: 143 SGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRSRTAICPINPKF 191
>gi|290985874|ref|XP_002675650.1| predicted protein [Naegleria gruberi]
gi|284089247|gb|EFC42906.1| predicted protein [Naegleria gruberi]
Length = 422
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 117/189 (61%), Gaps = 5/189 (2%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A+ ++ I+RT+YV+ ID Q+ E Q+ F CG++V+ R+CGD RFAF EF +E
Sbjct: 80 AEEDDKIKRTIYVTSIDTQILEAQVCEFFSYCGRIVNYRVCGDTQHPTRFAFFEFEQKES 139
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPV-----NPTFLPRTEDEREMCARTIYCTNIDK 338
A+AA++L+G LG Y +R+L S+T I P N T + RT+Y N D
Sbjct: 140 AQAAVSLSGQFLGRYALRILGSRTPIQPTPGAVGNGAVYSFTPAHHDQINRTVYVGNADI 199
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPI 398
+T+ D+K FF++ CG V ++ L GD HS R AFVEF+ ES AL CSG +LG+ I
Sbjct: 200 SLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEFLHMESRNKALECSGTLLGNRNI 259
Query: 399 RVSPSKTPV 407
R++PS+TP+
Sbjct: 260 RINPSRTPI 268
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 24/161 (14%)
Query: 272 RFAFIEFTDEEGARAALNLAGT-MLGFY------------PVRVLPSKTAIAPVN----- 313
++AF+EF+ E A+ A+ L+GT +LG + P V + T I+P +
Sbjct: 8 KYAFVEFSSSEEAKVAIELSGTEILGKHLKISLSRSPISNPTPVQSNPTQISPTDDNATK 67
Query: 314 -----PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 368
+ L R +E + RTIY T+ID ++ +A V FF S CG + R+ GD H
Sbjct: 68 YQFLSESELKRKAEEDDKIKRTIYVTSIDTQILEAQVCEFF-SYCGRIVNYRVCGDTQHP 126
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRP 409
TR AF EF ESA AA++ SG LG +R+ S+TP++P
Sbjct: 127 TRFAFFEFEQKESAQAAVSLSGQFLGRYALRILGSRTPIQP 167
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 100/157 (63%), Gaps = 38/157 (24%)
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVR 301
VTEE LAALF+ C QVVDCR+CGDPNSVLRFAFIEFTDEEGARAALNL+ T+LG+YPV
Sbjct: 31 MVTEENLAALFINCRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 302 VLPSKTAIAPVNPTFLPR-----------------TEDEREMCARTI------------- 331
VLPSKTAIAPVN TFLPR +M ++ +
Sbjct: 91 VLPSKTAIAPVNKTFLPRVCKPFGTNMLVLSSWLNVHALYDMVSKKVGRFSVLYSLTMNM 150
Query: 332 YCT--------NIDKKVTQADVKLFFESVCGEVYRLR 360
C NIDKKVTQAD+KLFFES+CGE+ R
Sbjct: 151 KCVQGLSTAQINIDKKVTQADLKLFFESICGELKVCR 187
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR 399
VT+ ++ F + C +V R+ GD + R AF+EF E A AALN S VLG P+
Sbjct: 32 VTEENLAALFIN-CRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 400 VSPSKTPVRP 409
V PSKT + P
Sbjct: 91 VLPSKTAIAP 100
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 87/116 (75%), Gaps = 20/116 (17%)
Query: 241 QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
VTEE LA LF+ CGQVVDCR+ GDPNSVLRFAF+EFTDEEGARAALNL+GT LG+YPV
Sbjct: 86 WMVTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAALNLSGTELGYYPV 145
Query: 301 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
VLPSKTAIAPVN TFLPR VTQAD+KLFFES+CGE+
Sbjct: 146 NVLPSKTAIAPVNETFLPR--------------------VTQADLKLFFESICGEI 181
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
C RT VT+ ++ F + CG+V R+ GD + R AFVEF E A AAL
Sbjct: 75 CVRTCRLYVQGWMVTEENLATLFIN-CGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAAL 133
Query: 387 NCSGVVLGSLPIRVSPSKTPVRP 409
N SG LG P+ V PSKT + P
Sbjct: 134 NLSGTELGYYPVNVLPSKTAIAP 156
>gi|413921446|gb|AFW61378.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 206
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 104/169 (61%), Gaps = 25/169 (14%)
Query: 138 KRDMRELQELFSKLNPMAEEFVPPSLAKTNNN---NHG----------VNGF---NGGFF 181
+R+MR+L++L SKLNPMAEEFVPPSLA + HG GF N GF
Sbjct: 37 EREMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFA 96
Query: 182 ANN---------SLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR 232
+ + + H R + G+RR NSRTS+AQR+E IRR
Sbjct: 97 VASPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRR 156
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE 281
TVYVSDID QVTEE LAALF+ CGQVVDCR+CGDPNSVLRFAFIEFTDE
Sbjct: 157 TVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDE 205
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 376
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD + R AF+EF
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 202
>gi|414884993|tpg|DAA61007.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 317
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 116/215 (53%), Gaps = 46/215 (21%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQ-------------------------- 257
+Q +E ++RT++V ID VTE+ LA LF G
Sbjct: 110 SQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTSYIVWDRKVNAYISTRWCIFFYITNR 169
Query: 258 --VVDCRICGDPNS--VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 313
VVDCRICGDP S LRF F+E E+ A A+L+L G ++ P+ V S+TAI P+N
Sbjct: 170 YTVVDCRICGDPTSDDGLRFGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPIN 229
Query: 314 PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 373
P FLP++E E E C RTIYCTNI K V R+RLL + ST IAF
Sbjct: 230 PKFLPQSEAEWETCLRTIYCTNISKNVC----------------RVRLLDNKERSTNIAF 273
Query: 374 VEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
+EFV AIAAL G+ + +PIR+ PSK+P+R
Sbjct: 274 IEFVEVYGAIAALGSGGIYVDGVPIRMCPSKSPIR 308
>gi|357153308|ref|XP_003576409.1| PREDICTED: uncharacterized protein LOC100831764 [Brachypodium
distachyon]
Length = 294
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 106/176 (60%), Gaps = 20/176 (11%)
Query: 244 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE--------------------EG 283
TE+ LA F CG VVDCRIC +P S FAFIEF +
Sbjct: 93 TEKDLADRFRQCGAVVDCRICRNPRSEFLFAFIEFQYHANFEFHVKQNIKKQMLHPISDD 152
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQA 343
A AAL+L G +G V+V PS+TAI VNP+FL +++ E+EMC+RT+YCTNI+K VT A
Sbjct: 153 ASAALHLKGVTIGDRHVKVAPSRTAIMHVNPSFLAQSDGEKEMCSRTVYCTNIEKSVTCA 212
Query: 344 DVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR 399
++ FF++ G V R+RLLGD +H T IAFVEF + IAAL G+ LPIR
Sbjct: 213 ELVGFFQAYFGSVSRVRLLGDDNHVTGIAFVEFAEVSADIAALRSIGIYARGLPIR 268
>gi|303278248|ref|XP_003058417.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459577|gb|EEH56872.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 187
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 106/182 (58%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E + V+VS++ V+E LA +F GCG+V+DCR CGD +FAF+ F
Sbjct: 6 EPTMWHNVHVSNVSLSVSESALARVFAGCGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQ 65
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL L G ++ +RV SKTA+ PVNP LP +E + E C RT+Y +NID + D+K
Sbjct: 66 ALTLDGFVVDGRAIRVTRSKTAVIPVNPGLLPTSEADVERCGRTVYVSNIDPTTSDDDLK 125
Query: 347 LFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP 406
FE+ G + R L R AF+EF A SA++AL SG V+G+ +RV PSKTP
Sbjct: 126 RAFEANAGAIRRAHALSSSRRDARNAFIEFENASSAVSALGMSGRVIGARKVRVVPSKTP 185
Query: 407 VR 408
++
Sbjct: 186 LK 187
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG 390
++ +N+ V+++ + F CG V R GD + AFV F + AL G
Sbjct: 13 VHVSNVSLSVSESALARVFAG-CGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQALTLDG 71
Query: 391 VVLGSLPIRVSPSKTPVRPRAPRL 414
V+ IRV+ SKT V P P L
Sbjct: 72 FVVDGRAIRVTRSKTAVIPVNPGL 95
>gi|238008810|gb|ACR35440.1| unknown [Zea mays]
Length = 92
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 75/89 (84%)
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAA 385
M RT+YCTNIDK VTQ DVK FFE +CGEV RLRLLGD HSTRIAFVEFV AE AI A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 386 LNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
LNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKPRVNRM 89
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
++ RTVY ++ID+ VT+ + F CG+V R+ GD R AF+EF EGA A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAP 311
LN +G +LG PVRV PSKT + P
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKP 84
>gi|145353373|ref|XP_001420989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357398|ref|XP_001422906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581225|gb|ABO99282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583150|gb|ABP01265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 183
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS-VLRFAFIEFTDEEGAR 285
E+ + TV+V D+ V+E +LA +F CG+++DCR+CGD N+ +AF+ F E
Sbjct: 1 EKAVPYTVFVKDVPASVSERELADVFASCGRIIDCRMCGDANTHKFSYAFVAFECAEAVD 60
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL L T L + V S TA+ PVNP LP+ E E E CARTIY N+DK V +
Sbjct: 61 RALLLDKTPLHGKNIMVKKSDTAVIPVNPLLLPQNEREVESCARTIYVANVDKTVDSHAL 120
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
KL FE G V RL L + +AFVEFV ES AL+ +G LG+ IRVS SKT
Sbjct: 121 KLLFEDRAGPVNRLHLQVKNNAVANVAFVEFVDLESVGTALHLTGEQLGNRMIRVSASKT 180
Query: 406 PVR 408
P+R
Sbjct: 181 PLR 183
>gi|308810827|ref|XP_003082722.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116061191|emb|CAL56579.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 650
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 187 IFNNHNARNGNVNANAAVRRKKSFGQGKRR--MNSRTSLAQREEIIR---RTVYVSDIDQ 241
++ N R GN N + RR S G G R + R S++ R TV+V +I
Sbjct: 146 LYAGPNGRVGN-NMDNQWRRANSDGSGGGRHTYHGRHSVSDERAGGRGSPNTVFVKEIPA 204
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNS-VLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
V+E +LA F CG++VDCR+C D NS +AF+ F + + AL+L L +
Sbjct: 205 SVSERELAETFAACGRIVDCRMCRDANSNKFSYAFVAFETADEVQNALSLDKMSLHGKNI 264
Query: 301 RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR 360
V S TA+ PVNP LP+ E E E ARTIY N+DK V +K FFE G V RL
Sbjct: 265 VVRRSDTAVIPVNPLLLPQNEAELESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLH 324
Query: 361 LLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
L +AFVEFV ESA ++L +G LG +RVS SKTP+R
Sbjct: 325 LQVKNAADANVAFVEFVNLESAASSLRLTGKQLGQRVVRVSASKTPLR 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG- 292
VY+S+I + ++ L A+F CG+V + + +P S +AF+EF D E A+ ALN G
Sbjct: 403 VYISNIPKNLSPGTLRAMFSECGRVTNVELLNNPKSKFPYAFVEFDDAESAKRALNFRGR 462
Query: 293 --------TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
L + R + A+ PV + D+ E RT++ T+ID + +
Sbjct: 463 EVQGCAINIELTYNKKRRGAPRLALDPV-------SVDKME---RTVFVTDIDPDLEPSF 512
Query: 345 VKLFFESVCGEV----YRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVLG-SLPI 398
V+ FE CG V Y+ G+ +A++EF S AL+ C LG S I
Sbjct: 513 VRSKFEDECGPVTLFWYKAFEKGE---KQALAYIEFTELSSVEKALDQCRTHFLGESRLI 569
Query: 399 RVSPSKTPVRPR 410
+V S TP+ P+
Sbjct: 570 KVRHSHTPLVPK 581
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD-----CRICGDPNSVLRFAFIEFTDEE 282
E RT+YV+++D+ V + L F V+ + D N AF+EF + E
Sbjct: 289 ESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLHLQVKNAADAN----VAFVEFVNLE 344
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM---------------C 327
A ++L L G LG VRV SKT + VN R ++R M
Sbjct: 345 SAASSLRLTGKQLGQRVVRVSASKTPLR-VNR----RMSEQRAMSYYASGTNGDAATPPA 399
Query: 328 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
+Y +NI K ++ ++ F S CG V + LL + AFVEF AESA ALN
Sbjct: 400 PTKVYISNIPKNLSPGTLRAMF-SECGRVTNVELLNNPKSKFPYAFVEFDDAESAKRALN 458
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRAPRLPM 416
G + I + + R APRL +
Sbjct: 459 FRGREVQGCAINIELTYNKKRRGAPRLAL 487
>gi|413926011|gb|AFW65943.1| hypothetical protein ZEAMMB73_108884 [Zea mays]
Length = 92
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 75/89 (84%)
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAA 385
M +RT+YCTNIDKKVT+ DVK FF+ CG+V RLRLL D HST IAFVEF AESAI A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 386 LNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
LN SG+VLGSLPIRVSPSKTPVRPR+PR+
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSPRV 89
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
++ RTVY ++ID++VTEE + F CG+V R+ D AF+EF E A A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNP 314
LN +G +LG P+RV PSKT + P +P
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSP 87
>gi|414585783|tpg|DAA36354.1| TPA: hypothetical protein ZEAMMB73_057809 [Zea mays]
Length = 217
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 70/83 (84%)
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 332
FAFIEF+DEEGAR ALNL GT+ GFYPVRVLPSKTA+ PVNP FLPRT+DE+EM RT+Y
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPKFLPRTDDEKEMVMRTVY 119
Query: 333 CTNIDKKVTQADVKLFFESVCGE 355
TNIDK VTQ DV FFE +CGE
Sbjct: 120 RTNIDKMVTQLDVNKFFEELCGE 142
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 371 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
AF+EF E A ALN G + G P+RV PSKT + P P+
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPKF 103
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 81/123 (65%), Gaps = 16/123 (13%)
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
VTEE LA LF+ CGQVV+CR+CGDPNSVLRFAFIEFTDE F P
Sbjct: 93 VTEENLATLFINCGQVVECRMCGDPNSVLRFAFIEFTDEVNET-----------FLPRVC 141
Query: 303 LPSKTAIAPVNP-----TFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 357
PS T + ++ ++DEREMCARTIY TNIDKKVTQAD+KLFFES+CGE+
Sbjct: 142 KPSGTNMLVLSSWLNVHALSDMSDDEREMCARTIYYTNIDKKVTQADLKLFFESICGELK 201
Query: 358 RLR 360
R
Sbjct: 202 VCR 204
>gi|294460213|gb|ADE75689.1| unknown [Picea sitchensis]
Length = 79
Score = 126 bits (317), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/77 (75%), Positives = 66/77 (85%), Gaps = 2/77 (2%)
Query: 294 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 353
MLG+YPVRVLPSKTAIAPVNPTFLPRTE+EREMCARTIYCTNIDKKV+Q+D+K FFE++C
Sbjct: 1 MLGYYPVRVLPSKTAIAPVNPTFLPRTEEEREMCARTIYCTNIDKKVSQSDLKAFFETLC 60
Query: 354 GEVYRL--RLLGDYHHS 368
G + RL Y HS
Sbjct: 61 GFSLEIAWRLSSFYSHS 77
>gi|413944598|gb|AFW77247.1| hypothetical protein ZEAMMB73_128485 [Zea mays]
Length = 331
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 64/76 (84%)
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
+GAR ALNL GT+ GFYPVRVLPSKTAI PVNP FLPRT+DE+EM RT+Y TNIDK VT
Sbjct: 135 KGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPRTDDEKEMVMRTVYRTNIDKMVT 194
Query: 342 QADVKLFFESVCGEVY 357
Q DVK FFE +CGE+Y
Sbjct: 195 QLDVKKFFEELCGELY 210
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 64/80 (80%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
++ I V+ I VTEE L LF+ CGQVVDCR+CGDPNSVLRFAFIEF DEEGARA
Sbjct: 86 QDHILSLVFHLHISPHVTEENLTTLFINCGQVVDCRMCGDPNSVLRFAFIEFADEEGARA 145
Query: 287 ALNLAGTMLGFYPVRVLPSK 306
ALNL+GT+LG+YPV VLPSK
Sbjct: 146 ALNLSGTVLGYYPVNVLPSK 165
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
R D+++ ++ +I VT+ ++ F + CG+V R+ GD + R AF+EF
Sbjct: 81 RYLDDQDHILSLVFHLHISPHVTEENLTTLFIN-CGQVVDCRMCGDPNSVLRFAFIEFAD 139
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
E A AALN SG VLG P+ V PSK P+
Sbjct: 140 EEGARAALNLSGTVLGYYPVNVLPSKLPLH 169
>gi|224132620|ref|XP_002321367.1| predicted protein [Populus trichocarpa]
gi|222868363|gb|EEF05494.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 120 bits (300), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/59 (88%), Positives = 57/59 (96%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
+EDERE+CARTIYCTNIDKK+TQADVKLFFES CGEV+RLRLLGDYHHSTRIAFVEF +
Sbjct: 2 SEDEREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAV 60
Score = 43.1 bits (100), Expect = 0.25, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSVLRFAFIEF 278
EI RT+Y ++ID+++T+ + F CG+V R+ GD + R AF+EF
Sbjct: 7 EICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEF 58
>gi|440801206|gb|ELR22227.1| RNAbinding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 533
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 105/203 (51%), Gaps = 36/203 (17%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALNLA 291
TVYV+ +D Q+ EE + LF CG V + R+CG+ N RFAF+EF+ E A A+ L
Sbjct: 164 TVYVTGVDTQLREEHVIQLFSLCGTVTNIRMCGETENKATRFAFVEFSTRESALMAMGLT 223
Query: 292 GTMLGFYPVRVLPSKTAI--------------------------APVNPTFLPRTEDERE 325
+LG P++V+PSKTAI A +PT+ +E
Sbjct: 224 NIVLGNAPIKVMPSKTAIQAGSRGGGGGPGGGGGPRPPHHAHAAAAFDPTY-------QE 276
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIA 384
+RT+Y +D +++A++ F S G V +L + GD H R AFVEF A
Sbjct: 277 RASRTLYVGGVDSNLSEAELLQMF-SGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHM 335
Query: 385 ALNCSGVVLGSLPIRVSPSKTPV 407
AL +G V+G PIRVS SKTP+
Sbjct: 336 ALAMNGTVVGERPIRVSQSKTPI 358
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 58/233 (24%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 290
+RTVYV I + E L F C ++ R+ GDP+ RF FIEF EGA+ A N+
Sbjct: 13 QRTVYVGCIPSNLNSETLGHFFSTCDTIIQIRLAGDPSYSTRFGFIEFATPEGAQRACNM 72
Query: 291 AGTMLGFYPVRVLPSKTAI----------------------------------------- 309
G L +R+ SKTAI
Sbjct: 73 NGVELDGKKLRITLSKTAISSTSSHSGHSAHSAQSDASSAYASAAAGHMGLHAYGAAYGM 132
Query: 310 ------------APVNPTFLP-RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
A + P + P ++R C T+Y T +D ++ + V F S+CG V
Sbjct: 133 GYGAQGGMPYMHAGMPPAYAPAHGSNDRVAC--TVYVTGVDTQLREEHVIQLF-SLCGTV 189
Query: 357 YRLRLLGDYHH-STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
+R+ G+ + +TR AFVEF ESA+ A+ + +VLG+ PI+V PSKT ++
Sbjct: 190 TNIRMCGETENKATRFAFVEFSTRESALMAMGLTNIVLGNAPIKVMPSKTAIQ 242
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGAR 285
+E RT+YV +D ++E +L +F G G V + GD RFAF+EF+ A
Sbjct: 275 QERASRTLYVGGVDSNLSEAELLQMFSGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAH 334
Query: 286 AALNLAGTMLGFYPVRVLPSKTAI 309
AL + GT++G P+RV SKT I
Sbjct: 335 MALAMNGTVVGERPIRVSQSKTPI 358
>gi|413954118|gb|AFW86767.1| hypothetical protein ZEAMMB73_327506, partial [Zea mays]
Length = 81
Score = 112 bits (281), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/59 (84%), Positives = 56/59 (94%)
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
EGARAALNL+GT+LG+YP+ VL SKTAIAPVN TFLPR++DEREMCARTIYCTNIDKKV
Sbjct: 14 EGARAALNLSGTVLGYYPINVLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKV 72
>gi|290997908|ref|XP_002681523.1| predicted protein [Naegleria gruberi]
gi|284095147|gb|EFC48779.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC------GDPNSVL- 271
S +S+ RT+++S ID +E++L F G + + R+C + N+ L
Sbjct: 192 SNSSIVDANSAASRTIHISGIDSSFSEDELLDYFSVYGDITNYRLCNNDQQSSNSNTQLQ 251
Query: 272 -RFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRTEDEREMCAR 329
+FAFIE+ E + A+ + G++ G ++V SKTAI P + + + R++ R
Sbjct: 252 TKFAFIEYATTEQSLKAIMVNGSLWGKSKLKVSHSKTAIQTPPKKSLIDK--QYRDLVER 309
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNC 388
TI+ ID K++Q VK FFE +CG ++R+ + GD + TR F+EF +S + AL
Sbjct: 310 TIHVGGIDVKLSQDHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEFEDKQSTLRALRL 369
Query: 389 SG-VVLGSLP-IRVSPSKTPV 407
SG + GS+ I+VSPSK+P+
Sbjct: 370 SGCTIAGSVKQIKVSPSKSPI 390
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RT+++ +I T E L LF GQV + ++ GDP+ RFAF+EF D A+ +L+L
Sbjct: 33 RTIHIGNISSYTTVESLQLLFSKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSLSLD 92
Query: 292 GT 293
GT
Sbjct: 93 GT 94
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
PS + ++P D +RTI+ + ID ++ ++ +F SV G++ RL
Sbjct: 180 PSSLYLGGLSPISNSSIVDANSAASRTIHISGIDSSFSEDELLDYF-SVYGDITNYRLCN 238
Query: 364 DYHHS--------TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
+ S T+ AF+E+ E ++ A+ +G + G ++VS SKT ++
Sbjct: 239 NDQQSSNSNTQLQTKFAFIEYATTEQSLKAIMVNGSLWGKSKLKVSHSKTAIQ 291
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
+RTI+ NI T ++L F S G+V ++L GD ++ R AFVEFV A +L
Sbjct: 31 TSRTIHIGNISSYTTVESLQLLF-SKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSL 89
Query: 387 NCSGVVLGSLPIRVSPSK 404
+ G +++S +K
Sbjct: 90 SLDGTEFMGQNLKISMAK 107
>gi|255079476|ref|XP_002503318.1| predicted protein [Micromonas sp. RCC299]
gi|226518584|gb|ACO64576.1| predicted protein [Micromonas sp. RCC299]
Length = 144
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 15/144 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--------------NSVLRFAFIEF 278
TVYV +I +E + F CG V +CR+ DP N R AF+ F
Sbjct: 1 TVYVREIPAGASEADVHDHFYTCGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVAF 60
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
E R AL + G++L P++V+PS+T + PVNP LPRTE+ERE CART+Y +N+D
Sbjct: 61 ETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNPGLLPRTEEERERCARTVYVSNVDP 120
Query: 339 KVTQADVKLFFESVC-GEVYRLRL 361
V +++ E++ G++ L L
Sbjct: 121 DVRSNELRSALEAIADGKIAALHL 144
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--------------HSTRIAFVE 375
T+Y I ++ADV F + CG V R+ D H TR+AFV
Sbjct: 1 TVYVREIPAGASEADVHDHFYT-CGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVA 59
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
F + AL G +L PI+V PS+T V P P L
Sbjct: 60 FETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNPGL 98
>gi|224061487|ref|XP_002300504.1| predicted protein [Populus trichocarpa]
gi|222847762|gb|EEE85309.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 87/149 (58%), Gaps = 24/149 (16%)
Query: 81 MAVVESASQDSAVSSA--GSIPASNGQDHPKQNGGTMVMPLDQGLY-----------NQN 127
MAV E+ S D A +SN QDH N ++ PL ++ + +
Sbjct: 1 MAVGENVSVDLGNFRAESSVSSSSNDQDHHIHNNNVLIQPLYMKVFQVGHHQAPPYNHHH 60
Query: 128 NQRSNGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNN----HGVNGFNGGFFAN 183
QRSNGG +KR++RELQELFSKLNPMA EFVPPSL +NNN+ +G+NG NGGF+ N
Sbjct: 61 QQRSNGGESYKREIRELQELFSKLNPMAAEFVPPSL--SNNNSFGTVNGLNGVNGGFYGN 118
Query: 184 ----NSLIFN-NHNARNGNVNANAAVRRK 207
N+L+ N N RNG VN NAA R K
Sbjct: 119 SSSSNNLVVNGNGFDRNGQVNGNAARRVK 147
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 33/198 (16%)
Query: 238 DIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGARAALNLAGTML 295
++ +Q+TEE L F G +V + C + N +++ + ++F D E A AL+L GT+L
Sbjct: 22 NLSKQITEELLCQFFSFIGPIVSISLQPC-EANPLVQESLVQFQDSEDAALALHLTGTVL 80
Query: 296 GFYPVRVLPSKTAI-----------APVNPT----FLP--------------RTEDEREM 326
+ + P I P NPT +P T ++
Sbjct: 81 ADKALFITPPSAKIQSFNSHGYLNIPPPNPTAPGVLVPGSMAGSTIVPYGQTATIAGQDS 140
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
RTIY NI ++Q +V + F S CG+V ++++ GD HSTR AF+EF +ESA AL
Sbjct: 141 VDRTIYTGNIHSGLSQQEVSMLFSS-CGDVTQVKMAGDATHSTRYAFIEFATSESAAMAL 199
Query: 387 NCSGVVLGSLPIRVSPSK 404
N G+++ I+V+ SK
Sbjct: 200 NLHGMMVAGRAIKVNRSK 217
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 220 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFT 279
+T+ ++ + RT+Y +I +++++++ LF CG V ++ GD R+AFIEF
Sbjct: 131 QTATIAGQDSVDRTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTRYAFIEFA 190
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKTAIA 310
E A ALNL G M+ ++V SK +I
Sbjct: 191 TSESAAMALNLHGMMVAGRAIKVNRSKHSIG 221
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 13/177 (7%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RT+YV ++ ++V E L ALF CG V RI GDP+ R+AFIEFT E ++ A+ L
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTRYAFIEFTTPEESQTAMMLD 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNID-KKVTQADVKLFFE 350
G M+ +RV ++ P + R+ D + RTI+ + ++++ + +F
Sbjct: 66 GMMVFERQIRVNMARGGSGP----GVVRSNDP-DRVQRTIHIGGLPFDELSEESISDYFS 120
Query: 351 SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
++ GEV +R S R A+VEF ++A A++ G LGS ++VS SKTP+
Sbjct: 121 NI-GEVNAVR------KSGRFAWVEFNTLQAAQTAMSLDGESLGSGTMKVSASKTPI 170
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 42/216 (19%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TV V++I TE+ L F CG +V + GD + ++AF+ F A AAL L+
Sbjct: 39 TVIVTNISPLATEQDLRDFFANCGNIVQINLLGDGLGISQYAFVRFETMAQANAALTLST 98
Query: 293 TMLGFYPVRV-----------------------------------------LPSKTAIAP 311
+ PV++ +P A+
Sbjct: 99 GAVAGMPVKIVMAASDIPVGGAAAAATAALPTPLALTPGVGAASGLGLLGAIPHSLALLS 158
Query: 312 VNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 371
+P ++++ ARTIY N++ +T + FF ++CG + RL GD H +R
Sbjct: 159 GSPANAQSYHEKQDEIARTIYVGNVNSTITSEQLMQFF-AICGPITFCRLAGDESHPSRF 217
Query: 372 AFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
AF+EF E+A AA+ +G +L ++V+ SK P+
Sbjct: 218 AFIEFATKEAAQAAMMLNGTMLLDRAVKVNHSKNPI 253
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE 281
S ++++ I RT+YV +++ +T EQL F CG + CR+ GD + RFAFIEF +
Sbjct: 166 SYHEKQDEIARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGDESHPSRFAFIEFATK 225
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTED 322
E A+AA+ L GTML V+V SK I V P P+T D
Sbjct: 226 EAAQAAMMLNGTMLLDRAVKVNHSKNPI--VKP---PKTVD 261
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
P + PV P F T+ TNI T+ D++ FF + CG + ++ LLG
Sbjct: 23 PGSDGLLPVPPQF----------SVSTVIVTNISPLATEQDLRDFFAN-CGNIVQINLLG 71
Query: 364 DYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV--SPSKTPV 407
D ++ AFV F A AAL S + +P+++ + S PV
Sbjct: 72 DGLGISQYAFVRFETMAQANAALTLSTGAVAGMPVKIVMAASDIPV 117
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 7/144 (4%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A + E IRRTV+V+++D ++T E L + F CG + R+ GD R+A+IEF + +
Sbjct: 153 ANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQA 212
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQA 343
+AL +G + G P++V SK A++ P P+ D + C + KV A
Sbjct: 213 IVSALQYSGAIFGGKPIKVTHSKNAVS--KPP--PKHSDRKRACFGVFNGMGVQVKVLHA 268
Query: 344 DVKLFFESVCGEVYRLRLLGDYHH 367
+ SVC +Y++ L+G H
Sbjct: 269 ---RWLHSVCHCLYQMVLVGRTGH 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 56/236 (23%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL---RFAFIEFTDEEGARAAL 288
+ + VS++ T EQL LF G+V D ++ + ++ + F++F D AL
Sbjct: 11 KLIQVSNVAHNATLEQLKVLFSFIGEVEDLKLFPESPAITVQSKVCFVKFVDPSSVPIAL 70
Query: 289 NLAGTM-----LGFYPV------------RVLPSKTAIA----------PVNPTFLPR-- 319
+L T+ L PV +++ + +A+A P P +P+
Sbjct: 71 HLTNTVFIDKSLIVVPVSDEPVSEEEKALQLVAASSALALGMGDGGGILP-TPALIPQLM 129
Query: 320 ----------------------TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 357
++ E RT++ N+D ++T A++ L F S CG++
Sbjct: 130 SSSGNTIAVPSSVPPPPPLTNVDANKVEEIRRTVFVNNLDPEIT-AEMLLSFFSSCGDIK 188
Query: 358 RLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
+R+ GD TR A++EF ++ ++AL SG + G PI+V+ SK V P+
Sbjct: 189 YIRMGGDDGKPTRYAYIEFAETQAIVSALQYSGAIFGGKPIKVTHSKNAVSKPPPK 244
>gi|428166786|gb|EKX35755.1| hypothetical protein GUITHDRAFT_118030 [Guillardia theta CCMP2712]
Length = 254
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 309 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 368
I P P E C TIY N++ +T + FF +VCG+V +R+ GD +
Sbjct: 2 IGPYGPNHTAALLAEGASC--TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPAT 59
Query: 369 ------TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP-VRPRA 411
TR AFV+F+ E A A+ SG +LG LPI+ P+K P V+PR+
Sbjct: 60 AFRFDRTRFAFVQFLSKEQADIAMTLSGTILGGLPIKCGPAKNPIVQPRS 109
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 13/95 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGD-PNSVLRF-----AFIEFTDEEGAR 285
T+YV +++ +T EQL F CGQV+ R+ GD P + RF AF++F +E A
Sbjct: 21 TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLSKEQAD 80
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 320
A+ L+GT+LG P++ P+K NP PR+
Sbjct: 81 IAMTLSGTILGGLPIKCGPAK------NPIVQPRS 109
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
+++DE EMCARTIYCTNIDKKVTQAD+KLFFES+CGE+
Sbjct: 178 QSDDECEMCARTIYCTNIDKKVTQADLKLFFESICGEI 215
>gi|255638879|gb|ACU19742.1| unknown [Glycine max]
Length = 179
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 132 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHG-VNGFNGGF-FANNSLIFN 189
NGG FKRDMR+L+EL SKLNPMAEEFVPPSLA T HG + G N GF + NN ++ N
Sbjct: 89 NGGESFKRDMRDLEELLSKLNPMAEEFVPPSLANT----HGLLAGPNAGFGYTNNFILPN 144
Query: 190 NHNARNGNVN 199
N+ NG N
Sbjct: 145 NYGNTNGQTN 154
>gi|413941688|gb|AFW74337.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 50
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 371 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
I F+ F AESA AALNCSGV+LGSLPIRVSPSKTPVRPRAPR MH
Sbjct: 5 ICFLIF-QAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 50
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
F+ F E A AALN +G +LG P+RV PSKT + P P
Sbjct: 5 ICFLIF-QAESATAALNCSGVILGSLPIRVSPSKTPVRPRAP 45
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 36/37 (97%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
++DEREMCARTIY TNIDKKVTQAD+KLFFES+CGE+
Sbjct: 299 SDDEREMCARTIYRTNIDKKVTQADLKLFFESICGEL 335
>gi|224109734|ref|XP_002333211.1| predicted protein [Populus trichocarpa]
gi|222835117|gb|EEE73552.1| predicted protein [Populus trichocarpa]
Length = 50
Score = 72.8 bits (177), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 373 FVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
F++ + AE AIAALNCSG VLGSLPIRVSPSKTPVRPR PR
Sbjct: 6 FLQLLQAEGAIAALNCSGAVLGSLPIRVSPSKTPVRPRIPR 46
Score = 43.1 bits (100), Expect = 0.28, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
F++ EGA AALN +G +LG P+RV PSKT + P P
Sbjct: 6 FLQLLQAEGAIAALNCSGAVLGSLPIRVSPSKTPVRPRIP 45
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
+++DEREMCARTIYCTNIDKKVTQ D KLFFES CGE+
Sbjct: 261 QSDDEREMCARTIYCTNIDKKVTQTDPKLFFESKCGEL 298
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 26/182 (14%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ I R++ V+V +D V ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPIQRKSGMNNVFVKKLDTAVNAKELQAAFTKCGRVLSCKVALDSAGNSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA----RT 330
F++F +GA+AAL + G+ LG V V P FL R +RE+ A R
Sbjct: 143 FVQFETADGAKAALEMDGSKLGDCEVVVAP-----------FLRRV--DREVMAAKSFRN 189
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES---AIAALN 387
IY N+ V +ADVK E+ G+V L L T+ A V F E+ AIAALN
Sbjct: 190 IYIKNLKATVAEADVKTTVETF-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVKAIAALN 248
Query: 388 CS 389
S
Sbjct: 249 ES 250
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 229 IIRRTVYVSD--IDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF---TDE 281
+ R +VYV D ID EE + LF VV ++C D L + ++ F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADA 64
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
E ALN G G +RV+ F R +R+ ++ +D V
Sbjct: 65 EKVIDALNYTGITPG-RQIRVM------------FSIRDPIQRKSGMNNVFVKKLDTAVN 111
Query: 342 QADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+++ F + CG V ++ L +S FV+F A+ A AAL G LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETADGAKAALEMDGSKLGDCEVVV 170
Query: 401 SP 402
+P
Sbjct: 171 AP 172
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 288
R +YV + +T+++L +F G++ C I +PN + FAF+ F D + A AAL
Sbjct: 289 RNLYVKHLPDDITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAAL 346
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 26/185 (14%)
Query: 217 MNSRTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 272
+ R + R+ + R++ V+V +D + ++L A F CG+V+ C++ D +
Sbjct: 80 LQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSK 139
Query: 273 -FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--- 328
+ F++F EGA+AAL++ G+ LG S+ +AP F+ R +RE+ A
Sbjct: 140 GYGFVQFETAEGAKAALDMNGSKLG-------DSEVVVAP----FVRRV--DREVMAAKS 186
Query: 329 -RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES---AIA 384
R IY NI T+ADVK E G+V L L T+ A V F E+ AIA
Sbjct: 187 FRNIYIKNIAAAATEADVKAAAEKF-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIA 245
Query: 385 ALNCS 389
ALN S
Sbjct: 246 ALNES 250
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 229 IIRRTVYVSD--IDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF---TDE 281
+ R +VYV D ID EE + LF VV ++C D L + ++ F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADA 64
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
E ALN G G +RV+ F R +R+ ++ +D +
Sbjct: 65 EKVIDALNYTGIAPGLQ-IRVM------------FSIRDPLQRKSGMNNVFVKKLDTAIN 111
Query: 342 QADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+++ F + CG V ++ L +S FV+F AE A AAL+ +G LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSKLGDSEVVV 170
Query: 401 SP 402
+P
Sbjct: 171 AP 172
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 288
R +YV + +T+++L +F G++ C I +PN + FAF+ F D + A AAL
Sbjct: 289 RNLYVKHLPDDITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAAL 346
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 26/182 (14%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ + R++ V+V +D + ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA----RT 330
F++F EGA+AAL++ G+ LG S+ +AP F+ R +RE+ A R
Sbjct: 143 FVQFETAEGAKAALDMNGSKLG-------DSEVVVAP----FVRRV--DREVMAAKSFRN 189
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES---AIAALN 387
IY NI T+ADVK E G+V L L T+ A V F E+ AIAALN
Sbjct: 190 IYIKNIAAAATEADVKAAAEKF-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALN 248
Query: 388 CS 389
S
Sbjct: 249 ES 250
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 229 IIRRTVYVSD--IDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF---TDE 281
+ R +VYV D ID EE + LF VV ++C D L + ++ F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADA 64
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
E ALN G G +RV+ F R +R+ ++ +D +
Sbjct: 65 EKVIDALNYTGIAPG-RQIRVM------------FSIRDPLQRKSGMNNVFVKKLDTAIN 111
Query: 342 QADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+++ F + CG V ++ L +S FV+F AE A AAL+ +G LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSKLGDSEVVV 170
Query: 401 SP 402
+P
Sbjct: 171 AP 172
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 288
R +YV + +T+++L +F G++ C I +PN + FAF+ F D + A AAL
Sbjct: 289 RNLYVKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAAL 346
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 228 EIIRRTVYVSDIDQQ-VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E IRRT+YV ++D Q VT EQL F G+V R+ GD RFAF+EF+D+ A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 287 ALNLAGTMLGFYPVRVLPSKTAI 309
AL G M G P+++ S AI
Sbjct: 226 ALTYNGVMFGGRPLKINHSNNAI 248
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
E RTIY N+D + A+ L F S GEV +R+ GD TR AFVEF S A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 385 ALNCSGVVLGSLPIRV 400
AL +GV+ G P+++
Sbjct: 226 ALTYNGVMFGGRPLKI 241
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
IRRT+YV ++ + +Q+ F CG++ R+ GD RFAF+EF + E + AL
Sbjct: 41 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 100
Query: 290 LAGTMLGFYPVRVLPSKTAI 309
G M G P++V SK AI
Sbjct: 101 YNGAMFGDRPIKVNHSKNAI 120
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 306 KTAIAPVNPTFLPRTED----EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
++A APV P+ P T + + + RTIY N+ + V FF++ CGE+ +R+
Sbjct: 16 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 74
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
GD TR AFVEF ES AL +G + G PI+V+ SK +
Sbjct: 75 AGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAI 120
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 6/176 (3%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGAR 285
E I VYV I TE+ + + F GCG + VDC D A I F E A+
Sbjct: 191 EDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAK 250
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL+L G+ +G + +++ P KT P F P + IY N+ +T+ D+
Sbjct: 251 RALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGIVE----GYNRIYVGNLSWDITEDDL 306
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
K FF R + + V+F +S + AL ++ PI++S
Sbjct: 307 KKFFSDCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPIKIS 362
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARA 286
E +RTV+V ++D V E+ L F CG + D R+ P+ + FA+IEF ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 287 ALNLAGTMLGFYPVRVLP----SKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVT 341
AL+ + PV V P SKTA+ P + T F P RT++ +D T
Sbjct: 746 ALSKDRQFMNGRPVLVDPCVDRSKTALRPKHQTGFDP----------RTVFVKRLDHSCT 795
Query: 342 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMA-ESAIAALNCSGVVLGSLPIR 399
+ DV+ FE G V +R++ R A+VEF + ++A A +N ++
Sbjct: 796 EQDVRTLFEQY-GAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGRQLQ 854
Query: 400 VSPSKTPVRPRA 411
V+ S P + A
Sbjct: 855 VALSNPPSKGHA 866
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 24/181 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ + R++ V+V +D + ++L A F CG+V+ C++ D + +
Sbjct: 83 RVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFSKCGRVLSCKVALDSAGNSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RTI 331
F++F +G +AAL + G+ LG S+ +AP F+ R D M A R I
Sbjct: 143 FVQFETADGTKAALEMNGSKLG-------DSEVVVAP----FVRRV-DREAMAAKSFRNI 190
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR---IAFVEFVMAESAIAALNC 388
Y NI T+ADVK E G+V L L T+ +AF E A AIAALN
Sbjct: 191 YIKNITASATEADVKAIVEEF-GKVDSLFLSEHARFPTKFALVAFEEHQAAVQAIAALNE 249
Query: 389 S 389
S
Sbjct: 250 S 250
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 231 RRTVYVSD--IDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF---TDEEG 283
R +VYV D ID EE + LF VV ++C D L + ++ F D E
Sbjct: 7 RTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEK 66
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQA 343
ALN G G +RV+ F R +R+ ++ +D +
Sbjct: 67 VIDALNYTGIAPG-RQIRVM------------FSIRDPLQRKSGMNNVFVKKLDTAINAK 113
Query: 344 DVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
+++ F S CG V ++ L +S FV+F A+ AAL +G LG + V+P
Sbjct: 114 ELQAAF-SKCGRVLSCKVALDSAGNSKGYGFVQFETADGTKAALEMNGSKLGDSEVVVAP 172
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 288
R +Y+ + +T+++L +F G++ C I +PN L+ FAF+ F D++ A AAL
Sbjct: 289 RNLYIKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAAL 346
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
IRRT+YV ++ + +Q+ F CG++ R+ GD RFAF+EF + E + AL
Sbjct: 109 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 168
Query: 290 LAGTMLGFYPVRVLPSKTAI 309
G M G P++V SK AI
Sbjct: 169 YNGAMFGDRPIKVNHSKNAI 188
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 306 KTAIAPVNPTFLPRT----EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
++A APV P+ P T + + RTIY N+ + V FF++ CGE+ +R+
Sbjct: 84 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 142
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
GD TR AFVEF ES AL +G + G PI+V+ SK
Sbjct: 143 AGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSK 185
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
IRRT+YV ++ + +Q+ F+ CG++ R+ GD RFAF+EF + E + AL
Sbjct: 174 IRRTIYVGNLSSTLHADQVMNFFLTCGEIKYVRMAGDEMQPTRFAFVEFANPESVQVALQ 233
Query: 290 LAGTMLGFYPVRVLPSKTAI 309
G M G P++V SK AI
Sbjct: 234 YNGAMFGDRPIKVNHSKNAI 253
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 306 KTAIAPVNPTFLPRT----EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
++A APV P+ P T + + RTIY N+ + AD + F CGE+ +R+
Sbjct: 149 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTL-HADQVMNFFLTCGEIKYVRM 207
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
GD TR AFVEF ES AL +G + G PI+V+ SK
Sbjct: 208 AGDEMQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSK 250
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICG---DPNSV-LRFAFIEFTDEEGARAALN 289
+ V++I T EQ+ LF G V+ + DPN+ + AFI++ D A +
Sbjct: 7 IQVTNIAPTATLEQIHTLFDHLGTFVEFELFPRNPDPNNPGTKVAFIKYADPSSVGVAQH 66
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFL----PRT----------EDEREMCARTIYCTN 335
L T+ + +P I P + P T + + + RTIY N
Sbjct: 67 LTSTVFIDRALICVPYTDGIIPNETVAMQFATPATALIQAGGVIDQTKLDEIKRTIYVGN 126
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGS 395
+D K AD + F CGEV +R+ GD TR AF+EF E +A+ +G + G
Sbjct: 127 LDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAMKLNGTLFGD 186
Query: 396 LPIRVSPS 403
++++ S
Sbjct: 187 RALKINHS 194
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 230 IRRTVYVSDID-QQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
I+RT+YV ++D +Q T +QL F CG+V R+ GD RFAFIEF E +A+
Sbjct: 118 IKRTIYVGNLDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAM 177
Query: 289 NLAGTMLGFYPVRVLPS-----KTAIAPVNPT 315
L GT+ G +++ S K A+ PVN T
Sbjct: 178 KLNGTLFGDRALKINHSNNAIVKPAVKPVNDT 209
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 281
A ++ + ++YV D++ VT+ QL LF GQVV R+C D NS L +A++ +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 282 -EGARA--ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
+ ARA ALN A L P+RV+ S R R + I+ N+DK
Sbjct: 174 MDAARAMEALNFAP--LNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDK 219
Query: 339 KVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSL 396
+ + F S G + ++ + D S FV++ ESA +A+ + +G+++
Sbjct: 220 TIDNKTLHDTF-SAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDK 278
Query: 397 PIRVSP 402
P+ V P
Sbjct: 279 PVYVGP 284
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALN 289
+ +Y+ ++D +T++QL LF G++ C+I D N V + + F+ F T EE ++A
Sbjct: 404 QNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTE 463
Query: 290 LAGTMLGFYPVRV 302
+ G M+ P+ V
Sbjct: 464 MNGKMISGKPLYV 476
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 281
A ++ + ++YV D++ VT+ QL LF GQVV R+C D NS L +A++ +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 282 -EGARA--ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
+ ARA ALN A L P+RV+ S R R + I+ N+DK
Sbjct: 174 MDAARAMEALNFA--PLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDK 219
Query: 339 KVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSL 396
+ + F S G + ++ + D S FV++ ESA +A+ + +G+++
Sbjct: 220 TIDNKTLHDTF-SAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDK 278
Query: 397 PIRVSP 402
P+ V P
Sbjct: 279 PVYVGP 284
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALN 289
+ +Y+ ++D +T++QL LF G++ C+I D N V + + F+ F T EE ++A
Sbjct: 404 QNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTE 463
Query: 290 LAGTMLGFYPVRV 302
+ G M+ P+ V
Sbjct: 464 MNGKMISGKPLYV 476
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D++ VT+ QL LF GQVV R+C D NS L +A++ F++ A AL
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE- 96
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 97 ---MLNFVPLNNKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKTIDNKTLHDTF- 145
Query: 351 SVCGEVYRLRL-LGDYHHSTRIAFVEF---VMAESAIAALNCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ A+SA+ +LN G+++ P+ V P
Sbjct: 146 SAFGAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLN--GMLINDKPVYVGP 199
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALN 289
+ +Y+ ++D ++++QL LF G++ C++ D N V + + F+ F T EE ++A
Sbjct: 319 QNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITE 378
Query: 290 LAGTMLGFYPVRV 302
+ G ML P+ V
Sbjct: 379 MNGKMLSGKPLYV 391
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T EQL F G V R+ GD RFAF+EF ++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARAL 222
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
L G M G P++V S AI
Sbjct: 223 TLNGVMFGDRPLKVNHSNNAI 243
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T A+ L F G+V +R+ GD TR AFVEFV ES AL
Sbjct: 165 RTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARALTL 224
Query: 389 SGVVLGSLPIRV 400
+GV+ G P++V
Sbjct: 225 NGVMFGDRPLKV 236
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
IRRT++V ++D T EQL F G+V R+ GD RFAF+EFT++ AL
Sbjct: 165 IRRTIFVGNLDSISTPEQLLQFFTQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALV 224
Query: 290 LAGTMLGFYPVRVLPSKTAI 309
L G++ PVRV S AI
Sbjct: 225 LNGSLFSGRPVRVNHSNVAI 244
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 88/231 (38%), Gaps = 63/231 (27%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP---NSVLRFAFIEFTDEEGARAAL 288
+ + VS++ + EQ+ LF G++ + ++ D + R +I+F+ E A AL
Sbjct: 8 QVIQVSNVAPTASREQMKTLFTYIGRIEELKLFPDEFTETNQPRVCYIKFSKSEEAGVAL 67
Query: 289 NLAGTML------------GFYP-----------------------------------VR 301
+L+ T+ G P V
Sbjct: 68 HLSNTVFVDRALMVVPVADGTIPDESKALQLSPATAASIGGASGKAKPSGLPSHVTNQVI 127
Query: 302 VLPSKTAIAPVNPTF----------LPRTEDEREM--CARTIYCTNIDKKVTQADVKLFF 349
V+ K I ++P LP D ++ RTI+ N+D T + FF
Sbjct: 128 VVNGKQMIQTIDPQLSAMNLPSYPLLPGGTDPSKVDEIRRTIFVGNLDSISTPEQLLQFF 187
Query: 350 ESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+ GEV +R+ GD TR AFVEF S + AL +G + P+RV
Sbjct: 188 -TQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALVLNGSLFSGRPVRV 237
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE +T+YV ++DQ VTE+ L ALF G V C+I + +S +AFIE+ + + A+
Sbjct: 3 EEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYANHQSAQT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL L + + + A +P N P+T+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVS 401
F GE+ R++ D S AFV FV AE+AI +N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMN--GQWLGSRSIRTN 170
Query: 402 PSKTPVRPRAPR 413
S +P APR
Sbjct: 171 WSTR--KPPAPR 180
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RT+YV ++D VTEE L ALF G V C++ +P S +AF+EF GA AL
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSD-PYAFLEFDTHSGAATALAAM 66
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A P N P+ + I+ ++ ++ +K F
Sbjct: 67 NGRL--FLDKEMKVNWATTPGN---QPKLDTSNHY---HIFVGDLSPEIETHTLKEAFAP 118
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPS-KT 405
GE+ R++ D S AFV FV AE+AI ++N G LGS IR + S +
Sbjct: 119 F-GEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMN--GQWLGSRSIRTNWSTRK 175
Query: 406 PVRPRAP 412
P PRAP
Sbjct: 176 PPPPRAP 182
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D++Q VTE QL LF GQ+V R+C D S L + ++ + + A
Sbjct: 25 QFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAA 84
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL + L F PV P + + +PT R+ A IY N+DK + +
Sbjct: 85 QALEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGAGNIYIKNLDKAIDNKAL 133
Query: 346 KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F ESA A++ +G++L + V P
Sbjct: 134 HDTF-SAFGNILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP 191
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 198 VNANAAVRRKKSFGQGKRRMNSRTSL-AQREEIIRRTV--------YVSDIDQQVTEEQL 248
+N ++ G+ +++ L Q E+ ++ TV YV ++D +T+++L
Sbjct: 268 LNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLDDSITDDKL 327
Query: 249 AALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 302
LF G + C++ DPN V + + F+ + T EE ++A + G M+ P+ V
Sbjct: 328 KELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYV 383
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 290
TV+V ++ T E++ F CG V D R+ PN V FA I+FT EG +AA+ L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
GT +RV ++ A T + P+T+ ++ N+ + +K F
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDTNYGPKTD--------KVFVANLSYDTDEDSLKQAF 193
Query: 350 E---SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSKT 405
E ++ GE+ L + D IA+++F + A AA+ +GV L PIR S
Sbjct: 194 EKFGTIVGEIG-LPISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYLDGRPIRTDFSGD 252
Query: 406 PVRPRAPRLP 415
R R P
Sbjct: 253 NDRNRLGERP 262
>gi|193704514|ref|XP_001944340.1| PREDICTED: hypothetical protein LOC100161931 [Acyrthosiphon pisum]
Length = 673
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
++R E IRRT+ ++D+ VT+++L F G V R C N + R+A +E++++
Sbjct: 167 SRRIEEIRRTLAAINVDENVTDDELIGFFQKAGDVKYVRWCSRENDITRYALVEYSEQAS 226
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIA 310
A L L G LG PV+V + AIA
Sbjct: 227 VIAGLKLNGVQLGSRPVQVTHATQAIA 253
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 88/233 (37%), Gaps = 64/233 (27%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL-----RFAFIEF-------- 278
+ + V++I Q T++Q+ LF G++ D R+ V R ++++
Sbjct: 15 KVIQVTNIAPQATKDQMQTLFGCIGKIEDIRLYPQIRDVSVPVQSRICYVKYFDSLCVAV 74
Query: 279 --------------------------TDEEGARAALNLAGTMLGFYP------------V 300
DE A N A + G YP +
Sbjct: 75 AQHLTNTVFIDRALIVTPYQSSVGDIPDEYRALDIANQANIVPGLYPSDPKLPAHVVNQI 134
Query: 301 RVLPSKTAIAPVNPTF----------LPRTEDER--EMCARTIYCTNIDKKVTQADVKLF 348
+P I +P LP T D R E RT+ N+D+ VT ++ F
Sbjct: 135 EGIPPNQVIVTNDPVLASNGLPPYPQLPITYDSRRIEEIRRTLAAINVDENVTDDELIGF 194
Query: 349 FESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
F+ G+V +R + TR A VE+ S IA L +GV LGS P++V+
Sbjct: 195 FQK-AGDVKYVRWCSRENDITRYALVEYSEQASVIAGLKLNGVQLGSRPVQVT 246
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
++ ++YV D+D VT+ QL LF GQVV RIC D S L + ++ F++ A
Sbjct: 20 QLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAA 79
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A+++ L F P+ P + + +P+ R+ A I+ N+D+ + D
Sbjct: 80 KAMDV----LNFTPLNNKPIRIMYSHRDPSV-------RKSGAANIFIKNLDRAI---DH 125
Query: 346 KLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
K ++ S+ G + ++ D ++ FV+F ESA +A++ +G++L P+ V
Sbjct: 126 KALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYV 184
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ ++ L +R E+ ++ TV Y+ ++D VT+E+L+ LF G V C
Sbjct: 276 GKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSC 335
Query: 262 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRVLPSK 306
+I DP + R + F+ F T EE RA + G M+ P+ V P++
Sbjct: 336 KILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQ 382
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
++ ++YV D+D VT+ QL LF GQVV RIC D S L + ++ F++ A
Sbjct: 20 QLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAA 79
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A+++ L F P+ P + + +P+ R+ A I+ N+D+ + D
Sbjct: 80 KAMDV----LNFTPLNNKPIRIMYSHRDPSV-------RKSGAANIFIKNLDRAI---DH 125
Query: 346 KLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
K ++ S+ G + ++ D ++ FV+F ESA +A++ +G++L P+ V
Sbjct: 126 KALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYV 184
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ ++ L +R E+ ++ TV Y+ ++D VT+E+L+ LF G V C
Sbjct: 276 GKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSC 335
Query: 262 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRVLPSK 306
+I DP + R + F+ F T EE RA + G M+ P+ V P++
Sbjct: 336 KILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQ 382
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRT+YV +++ Q T EQL F G V R+ GD RFAF+EF+D+ AL
Sbjct: 200 IRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQNSVTRAL 259
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 260 TFNGVMFGDRPLKINHSNNAI 280
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 24/149 (16%)
Query: 269 SVLRFAFIEFTDEEGARAALNLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRTEDEREM- 326
SVLR +E L++ T LG P + P T +APV P P ++
Sbjct: 132 SVLRREKVEV-------PLLSVPLTSLGVNLPTPLEPVITTLAPVLPALTPAIPAVADLP 184
Query: 327 ---------------CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 371
RTIY N++ + T A+ L F G+V +R+ GD TR
Sbjct: 185 QPPLMGNVDPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRF 244
Query: 372 AFVEFVMAESAIAALNCSGVVLGSLPIRV 400
AFVEF S AL +GV+ G P+++
Sbjct: 245 AFVEFSDQNSVTRALTFNGVMFGDRPLKI 273
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG +P + V+P+ + + RT+Y N++ + T AD
Sbjct: 35 AALDPNITALG-----EIPQPPIMGNVDPSKI-------DEIRRTVYVGNLNSQTTTADQ 82
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 83 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 137
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
R V+V ++D+ + +QL+ +F G+V+ C++ D + V + + F++F E A N
Sbjct: 30 RGNVFVKNLDESIDNKQLSDMFSAFGKVLSCKVVRDASGVSKGYGFVQFYSELSVNIACN 89
Query: 290 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ GT++ + V P F+ R + + +Y N+ + T D+K+
Sbjct: 90 VRNGTLIRNQHIHVSP-----------FVSRRQWDESRVFTNVYVKNLAETTTDDDLKMI 138
Query: 349 FESVCGEVYRLRLLGDYHHSTRI-AFVEFVMAESAIAALN 387
FE GE+ ++ D +R+ FV F AE+A+ A++
Sbjct: 139 FEEF-GEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAID 177
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLA 291
+YV ++D V +L LF G ++ C++ PN + + F+EF T EE ++A L +
Sbjct: 225 LYVKNLDYSVDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMN 284
Query: 292 GTMLGFYPVRV 302
G ++G P+ V
Sbjct: 285 GKVVGNKPIYV 295
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 291
VYV ++ + T++ L +F G++ + D R F F+ F E A A++ +
Sbjct: 121 VYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAIDKMN 180
Query: 292 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR---TIYCTNIDKKVTQADV 345
GT++ + R K I + F + +R+M R +Y N+D V +
Sbjct: 181 GTIVDEKELHVGRAQRKKNRIQDLKVIF-KLEKIKRDMKTRKGTNLYVKNLDYSVDNTKL 239
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIA----FVEFVMAESAI-AALNCSGVVLGSLPIRV 400
+ F S G + +++ H RI+ FVEF +E A A L +G V+G+ PI V
Sbjct: 240 QELF-SEFGTIISCKVMV---HPNRISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPIYV 295
Query: 401 S 401
S
Sbjct: 296 S 296
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 143 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 202
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 203 AFNGVMFGDRPLKINHSNNAI 223
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 204
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 205 NGVMFGDRPLKI 216
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 82 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 141
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 142 AFNGVMFGDRPLKINHSNNAI 162
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 143
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 144 NGVMFGDRPLKI 155
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 19/192 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
+E +T+YV ++DQ VTE+ L ALF G V C+I + +S +AFIE+ + A+
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYASHQSAQT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL L + + + A +P N P+T+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVS 401
F GE+ R++ D S AFV FV AE+AI +N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMN--GQWLGSRSIRTN 170
Query: 402 PSKTPVRPRAPR 413
S +P APR
Sbjct: 171 WSTR--KPPAPR 180
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 44 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 103
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 104 AFNGVMFGDRPLKINHSNNAI 124
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG +P + V+P+ + DE RT+Y N++ + T AD
Sbjct: 15 AALDPNITTLG-----EIPQPPLMGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 62
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
L F GEV +R+ GD TR AFVEF S AL +GV+ G P++++ S
Sbjct: 63 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 120
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G V R+ GD RFAF+EF+++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARAL 222
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 223 TFNGVMFGDRPLKINHSNNAI 243
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 60/227 (26%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA----FIEFTDEEGARAALN 289
V V+++ V+ EQ+ LF G + + R+ N+ L F+ +I++ D A +
Sbjct: 10 VQVTNLSSAVSSEQMRTLFGFLGDIDELRLYPPDNAALSFSSKVCYIKYRDPSSVGVAQH 69
Query: 290 LAGTMLGFYPVRVLP-----------SKTAIAPVNPT--------FLP------------ 318
L T+ + V+P + + +AP P LP
Sbjct: 70 LTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPSTPVPSLIPSGGLLPIPAPNPLQNLNL 129
Query: 319 ----RTEDEREMCA---------------------RTIYCTNIDKKVTQADVKLFFESVC 353
R ++ A RT+Y N++ + T AD L F
Sbjct: 130 PVVNRMSASLDLAASVSSQPPLMGNVDPTKVDEIRRTVYVGNLNSQTTTADQLLEFFRQV 189
Query: 354 GEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
G V +R+ GD TR AFVEF ES AL +GV+ G P+++
Sbjct: 190 GSVKFVRMAGDETQPTRFAFVEFSEQESVARALTFNGVMFGDRPLKI 236
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 207 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 266
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 267 AFNGVMFGDRPLKINHSNNAI 287
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 268
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 269 NGVMFGDRPLKI 280
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 151 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 198
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 199 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 253
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 21/193 (10%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE +T+YV ++D VTEE L LF G V C+I + S+ FAFIE+ + + A+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRE-TSIDPFAFIEYANHQSAQT 61
Query: 287 AL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL + M +RV + +A P+T+ + I+ ++ ++ +
Sbjct: 62 ALAAMNKRMFLKKEIRVNWATSA------GNQPKTDTSQH---HHIFVGDLSPEIDTETL 112
Query: 346 KLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F GE+ R++ D S AFV FV AE+AIA +N G LGS IR
Sbjct: 113 REAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMN--GQWLGSRSIRT 169
Query: 401 SPSKTPVRPRAPR 413
+ S +P APR
Sbjct: 170 NWSTR--KPPAPR 180
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 295 LGFYPVRVL-PSKTAIA-----PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
LG P L P+ TA+ P+ P DE RT+Y N++ + T AD L
Sbjct: 145 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 201
Query: 349 FESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 202 FFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 253
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 222
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 223 AFNGVMFGDRPLKINHSNNAI 243
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 224
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 225 NGVMFGDRPLKI 236
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + + RT+Y N++ + T AD
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI-------DEIRRTVYVGNLNSQTTTADQ 85
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQ-VTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G V R+ GD RFAF+EF D++ AL
Sbjct: 166 IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARAL 225
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 226 TYNGVMFGDRPLKINHSNNAI 246
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 300 VRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRL 359
V L + +A P+ P DE RT+Y N++ + T AD L F G+V +
Sbjct: 142 VATLSAVSAQPPLMGNVDPSKVDE---IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFV 198
Query: 360 RLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
R+ GD TR AFVEF +S AL +GV+ G P+++
Sbjct: 199 RMAGDETQPTRFAFVEFADQDSVARALTYNGVMFGDRPLKI 239
>gi|328852755|gb|EGG01898.1| hypothetical protein MELLADRAFT_91734 [Melampsora larici-populina
98AG31]
Length = 1071
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 289
R T+YV++ + T+E + + F G++ D R S RF +++FT + A++AL
Sbjct: 719 RSTLYVTNFPEDATDEWIRSKFGEFGKIFDVRWPSKRFKSTRRFCYVQFTSPDSAQSALA 778
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T V PS+ ++ + + R +Y T + K V +AD++ F
Sbjct: 779 LHNT-------EVAPSQKMSVFISDPLRKKARTDVGANDRELYITCLTKFVQEADLRKLF 831
Query: 350 ESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
+ G++ +R+ L + HS AFVEF SA AAL+ + V L I V+ S
Sbjct: 832 QPF-GDIKGVRMILNEDGHSKGFAFVEFETEASAKAALSMNNVELKKRRIGVTIS 885
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 145 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 204
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 205 AFNGVMFGDRPLKINHSNNAI 225
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 116 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 163
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 164 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 218
>gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus]
Length = 318
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG +P + V+P+ + DE RT+Y N++ + T AD
Sbjct: 38 AALDPNITTLG-----EIPQPPLMGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 154 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 201
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 202 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 256
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE RT+YV ++D V+EE L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A LA + + + A +P N L + I+ ++ ++ +K
Sbjct: 62 A--LAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVS 401
F GE+ R++ D S AFV FV AE+AIAA+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMN--GQWLGSRSIRTN 170
Query: 402 PS 403
S
Sbjct: 171 WS 172
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 143 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 202
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ EGA+ AL + G MLG ++V P+ +P
Sbjct: 203 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKV---------GRPSNMP 253
Query: 319 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTR- 370
+ + DE + A+ IY +I +T+ D+K FE+ G + ++ G HS +
Sbjct: 254 QAQQVIDEIQEEAKNYNRIYIASIHPDLTEEDIKSVFEAF-GAIATCKMSQGSSAHSHKG 312
Query: 371 IAFVEFVMAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
AF+E+ +SAI A+ + LG +RV S TP
Sbjct: 313 YAFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 349
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 63 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 110
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 111 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 165
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V + + F CG+VVD R+ D + + F +EF E A++AL L
Sbjct: 355 KTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALEL 414
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRT---EDEREMCARTIYCTNIDKKVTQADVKL 347
G L VR+ +A F P + ++ ++T++ DK + + +++
Sbjct: 415 NGQELLQRGVRL-----DLARERGAFTPNSTGNQNSGRGQSQTVFVRGFDKSLGEDEIRA 469
Query: 348 FFE---SVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
E + CG+ R+ + DY +S A+++F ++S A+ G L P+ +
Sbjct: 470 KLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSFNKAIELHGSELDGYPLSIDE 529
Query: 403 SK 404
+K
Sbjct: 530 AK 531
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 225 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESV 284
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------I 331
AAL L G L P+ V P TE E+ ART +
Sbjct: 285 AAALQLTGQKLLGIPIIVQP---------------TEAEKNRQARTTSGHHPNSVPFHRL 329
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCS 389
Y NI +T+ D++ FE GE+ ++L D + +R FV+F A +A AL +
Sbjct: 330 YVGNIHFSITETDLQHVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMN 388
Query: 390 GVVLGSLPIRV 400
G L PIRV
Sbjct: 389 GFDLAGRPIRV 399
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T DER+ RT++ + ++ ++K FFE G V +++ D + S + +VEF
Sbjct: 223 TNDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 279
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +PI V P++
Sbjct: 280 SEESVAAALQLTGQKLLGIPIIVQPTE 306
>gi|260821314|ref|XP_002605978.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
gi|229291315|gb|EEN61988.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
Length = 645
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQ-QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV ++D VT EQL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 206 IRRTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKAL 265
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 266 QYNGIMFGNRPLKINHSNNAI 286
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N+D A+ L F GEV +R+ GD TR AFVEF S AL
Sbjct: 208 RTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKALQY 267
Query: 389 SGVVLGSLPIRV 400
+G++ G+ P+++
Sbjct: 268 NGIMFGNRPLKI 279
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 289
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ E+A +A+ + +G+++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 201
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + ++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 323 LYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMN 382
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
G M+ P+ V F R ED + M
Sbjct: 383 GKMISGKPLYV------------AFAQRKEDRKAML 406
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 199 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 258
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 259 AFNGVMFGDRPLKINHSNNAI 279
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 170 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 217
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 218 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 272
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE RT+YV ++D V+EE L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A LA + + + A +P N L + I+ ++ ++ +K
Sbjct: 62 A--LAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVS 401
F GE+ R++ D S AFV FV AE+AIAA+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMN--GQWLGSRSIRTN 170
Query: 402 PS 403
S
Sbjct: 171 WS 172
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 295 LGFYPVRVL-PSKTAIA-----PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
LG P L P+ TA+ P+ P DE RT+Y N++ + T AD L
Sbjct: 145 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 201
Query: 349 FESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 202 FFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 253
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 289
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ E+A +A+ + +G+++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 201
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + ++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 323 LYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMN 382
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
G M+ P+ V F R ED + M
Sbjct: 383 GKMISGKPLYV------------AFAQRKEDRKVML 406
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 290
++YV D+D VTE L +F GQV R+C B L +A++ + E A AL+
Sbjct: 61 SLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNYQKREEAEHALDT 120
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F ++ + + +P+ R+ ++ N+ + D K ++
Sbjct: 121 ----LAFCDIKGKQCRIMWSQRDPSM-------RKKGTGNVFIKNLHPDI---DNKTLYD 166
Query: 351 --SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G++ ++ D H HS FV + AESA AA+ N +G++L ++ + V+P
Sbjct: 167 TFSTFGKILSCKIATDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVAP 222
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AAL+ T LG P L + V+P+ + DE RT+Y N++ + T AD
Sbjct: 154 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 201
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
L F GEV +R+ GD TR AFVEF S AL +GV+ G P+++
Sbjct: 202 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 256
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 245 NGVMFGDRPLKI 256
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN 289
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ E+A +A+ + +G+++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 201
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+DQ VT+ QL LF GQVV R+C D ++ L + ++ +++++ A A+++
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ + +++ +PT +R+ A I+ N+DK + D+K E
Sbjct: 101 ----LNFTPLNNKTIRVSVSRRDPT-------DRKSGAGNIFIKNLDKSI---DIKALHE 146
Query: 351 SVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
+ G + ++ D S FV++ E+A A++
Sbjct: 147 TFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAID 186
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D + +E+L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 324 LYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMN 383
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 384 GKMIVSKPLYV 394
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFTDEE 282
EE +T+YV ++D VTEE L LF G V C+I DP +AFIE+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDP-----YAFIEYASHT 57
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
A+ A LA F+ + + A +P N P+T+ + I+ ++ ++
Sbjct: 58 SAQTA--LAAMNKRFFLKKEIKVNWATSPGN---QPKTDTSQHY---HIFVGDLSPEIET 109
Query: 343 ADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLP 397
++ F GE+ R++ D S AFV FV AE+AI +N G LGS
Sbjct: 110 ETLREAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMN--GQWLGSRS 166
Query: 398 IRVSPSKTPVRPRAPR 413
IR + S +P APR
Sbjct: 167 IRTNWSTR--KPPAPR 180
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAF 275
MN + +R+ RTV+V ++ VTE+++ +F CG V D R+ + + + +
Sbjct: 603 MNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQKKFKGYCY 662
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKT-AIAPVNPTFLPRTEDEREMCARTIYCT 334
+EF DEE A+ AL + P+ V PSK + AP FL E +M ++ +
Sbjct: 663 VEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFLY----ENKMEKNKLFVS 718
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAI-AALNCSGVV 392
+ + +T +++ F S G++ +R++ + +A+V+F SA A +
Sbjct: 719 GLPRTLTTEELEKTF-SKFGKLKGVRIVTFKSGVPKGLAYVDFENEASATRAVMGLDNTQ 777
Query: 393 LGSLPIRVSPSKTPVRPRAP 412
+G I V+ S P R +AP
Sbjct: 778 IGEHTITVAISNPPTR-KAP 796
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 156 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 215
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ EGA+ AL + G MLG ++V P+ +P
Sbjct: 216 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKV---------GRPSNMP 266
Query: 319 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTR- 370
+ + DE + A+ IY +I +T+ D+K FE+ G + ++ G H+ +
Sbjct: 267 QAQQVIDEIQEEAKNYNRIYIASIHPDLTEEDIKSVFEAF-GPIVTCKMSQGSAAHTHKG 325
Query: 371 IAFVEFVMAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
AF+E+ +SAI A+ + LG +RV S TP
Sbjct: 326 YAFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 362
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 218 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 277
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 278 AFNGVMFGDRPLKINHSNNAI 298
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 279
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 280 NGVMFGDRPLKI 291
>gi|405961668|gb|EKC27433.1| Putative splicing factor, arginine/serine-rich 7 [Crassostrea
gigas]
Length = 449
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
T A+ EEI RRTVYV ++ + VT EQL + F G+V R+ GD + A++EFTD
Sbjct: 154 TDPAKIEEI-RRTVYVGNLAKNVTTEQLLSFFSQVGEVKYVRMAGDEKQPTKNAYVEFTD 212
Query: 281 EEGARAALNLAGTMLGFYPVRV 302
+ AL G M P+ V
Sbjct: 213 QRSISTALTYNGVMFQTLPISV 234
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 64/236 (27%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-------GDPNSVLRFAFIEFT 279
E+I + + +++I T++Q+ LF G++ +C++ GD ++ + ++++
Sbjct: 3 EKITTKVIQITNIAPNATKDQMKTLFGYLGRIDECKMYPSNELPEGDTST--KVCYVKYD 60
Query: 280 DEEGARAALNLAGTM-----LGFYPV------------RVLPSKTA-IAPVNPTF----- 316
D + AL+L T+ L PV ++ PS A + P P++
Sbjct: 61 DSVSSGIALHLTNTVFIDRALIIVPVMDGKIPDETTALQIAPSAIAGMIPGTPSWPSNVI 120
Query: 317 -----------------------------LPRTED--EREMCARTIYCTNIDKKVTQADV 345
LP D + E RT+Y N+ K VT +
Sbjct: 121 SQMTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVGNLAKNVTTEQL 180
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
FF V GEV +R+ GD T+ A+VEF S AL +GV+ +LPI V+
Sbjct: 181 LSFFSQV-GEVKYVRMAGDEKQPTKNAYVEFTDQRSISTALTYNGVMFQTLPISVT 235
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D++Q VTE QL LF GQVV R+C D S L + ++ + + A
Sbjct: 25 QFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAA 84
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A+ + L F PV P + + +PT R+ IY N+DK + +
Sbjct: 85 QAIEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGTGNIYIKNLDKAIDNKAL 133
Query: 346 KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F ESA A++ +G++L + V P
Sbjct: 134 HDTF-SAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP 191
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ +++ L R E+ ++ TV YV ++D +T+++L LF G + C
Sbjct: 281 GKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLDDSITDDKLKELFSEFGTITSC 340
Query: 262 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 302
++ DPN V R + F+ F T EE +RA + G M+ P+ V
Sbjct: 341 KVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYV 383
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
R V+V ++D+ + +QL +F G+V+ C++ D + V + + F++F + A N
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 290 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
GT++ + V P F+ R + ++ +Y N+ + T AD+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 349 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVL 393
F GE+ ++ D S R FV F AE+A+ A+ +GVV+
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVV 184
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 211 GQGKRRMNSRTSLAQR---EEIIR-------RTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
G+ +R+ N L + E+IIR +YV ++D V +L LF G +
Sbjct: 192 GRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITS 251
Query: 261 CRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTMLGFYPVRV 302
C++ N + + F+EF T EE ++A L + G M+G P+ V
Sbjct: 252 CKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYV 295
>gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI450757, partial [Homo sapiens]
Length = 386
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 33/254 (12%)
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR-TVYVSDIDQQ 242
+S F ++ R A + K+ FGQ R+N + QRE+ ++V D+ +
Sbjct: 98 SSYGFVDYYERGSAALAILTLNGKQIFGQ-PIRVNWAYASGQREDTTDHFHIFVGDLSPE 156
Query: 243 VTEEQLAALFVGCG-QVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTMLGFY 298
VT+ L A F D R+ D + + F+ F +++ A++A+N L G LG
Sbjct: 157 VTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNR 216
Query: 299 PVR--------------VLPSKTAIAPVNPTFLPRT-----ED--EREMCARTIYCTNID 337
+R + +I VN F ED E RT+Y N+
Sbjct: 217 QIRCNWATKGANSGEDQLASDSKSIVDVNNNFTENAKQKSNEDAPENNPLYRTVYVGNLA 276
Query: 338 KKVTQADVKLFFESV-CGEVYRLRLLGDYHHSTRIAFVEFV-MAESAIAALNCSGVVLGS 395
+VTQ + FF ++ G + +R+ H FV++ AE+A+A +G +LG
Sbjct: 277 HEVTQDVLHRFFHALGAGAIEEVRV----QHGKGFGFVKYSNHAETALAIQTGNGRILGG 332
Query: 396 LPIRVSPSKTPVRP 409
P++ S P P
Sbjct: 333 KPVKCSWGNKPTPP 346
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE-EGARAALNL 290
R+VYV +I QVTE L +F G V C++ S + F+++ + A A L L
Sbjct: 61 RSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKS--SYGFVDYYERGSAALAILTL 118
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
G + P+RV + + + ED + I+ ++ +VT + + FF
Sbjct: 119 NGKQIFGQPIRVNWAYAS---------GQREDTTDHF--HIFVGDLSPEVTDSALFAFFS 167
Query: 351 SVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIR 399
+ R++ D S FV F + A +A+N +G LG+ IR
Sbjct: 168 AYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIR 219
>gi|380792715|gb|AFE68233.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a,
partial [Macaca mulatta]
Length = 394
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 208 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 267
+S G K +M S L + E TV+V+D+ TE+ L ALF CG + + +I
Sbjct: 585 RSDGNKKAKMGSTPPLKRDRE--NSTVFVADLPSGATEDDLTALFKDCGDIREIKITSLA 642
Query: 268 NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
NS R A IEF D E A L + + V
Sbjct: 643 NS--RVATIEFVDRESVPAGLTKDKKRINGQEISV---------------------HLAW 679
Query: 328 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST-RIAFVEFVMAESAIAAL 386
T+Y TN +KV A ++ F+ G ++ +R +T R +V+F E+A AAL
Sbjct: 680 QSTLYVTNFPEKVDDAYIRQLFDQF-GVIFDVRWPSKKFKATRRFCYVQFTSKEAAQAAL 738
Query: 387 NCSGVVLG-SLPIRV 400
+ G L LP+ V
Sbjct: 739 SLHGTELEPGLPMNV 753
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALNLA 291
T+YV++ ++V + + LF G + D R + RF +++FT +E A+AAL+L
Sbjct: 682 TLYVTNFPEKVDDAYIRQLFDQFGVIFDVRWPSKKFKATRRFCYVQFTSKEAAQAALSLH 741
Query: 292 GTML--GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKL 347
GT L G P+ V S NP R ++ + A R +Y + K V + D+K
Sbjct: 742 GTELEPGL-PMNVFIS-------NPE---RKKERTDAGADDREVYVAGLSKFVIRDDLKK 790
Query: 348 FFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTP 406
F++ G V +R+ D + +AFVEF SA AL + + + I V+ S +
Sbjct: 791 LFKTF-GPVKDIRVTKDDTGLCKGVAFVEFEDEPSAQRALQANNHDVKNRRIAVTMSDSR 849
Query: 407 VRPR 410
VR R
Sbjct: 850 VRAR 853
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ + V + QL +F G VV R+C D NS L +A++ + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ C G + ++ D +R FV+F ESA +A++ +G+++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGA- 284
E+ +Y+ ++++ + +E+L LF G + C++ D N V R + F+ F E A
Sbjct: 312 EKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDAN 371
Query: 285 RAALNLAGTMLGFYPVRV 302
RA + G M+G P+ V
Sbjct: 372 RALTEMNGKMVGSKPLYV 389
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G V R+ GD RFAF+EF +++ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARAL 222
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P++V S AI
Sbjct: 223 TFNGVMFGDRPLKVNHSNNAI 243
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F G+V +R+ GD TR AFVEFV +S AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARALTF 224
Query: 389 SGVVLGSLPIRV 400
+GV+ G P++V
Sbjct: 225 NGVMFGDRPLKV 236
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ + V + QL +F G VV R+C D NS L +A++ + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ C G + ++ D +R FV+F ESA +A++ +G+++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGA- 284
E+ +Y+ ++++ + +E+L LF G + C++ D N V R + F+ F E A
Sbjct: 312 EKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDAN 371
Query: 285 RAALNLAGTMLGFYPVRV 302
RA + G M+G P+ V
Sbjct: 372 RALTEMNGKMVGSKPLYV 389
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME- 101
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F PV P + + +P+ R+ A I+ N+DK + D K F+
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALFD 148
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ + ++ FV++ ESA A+N +G++L + V P
Sbjct: 149 TFSAFGTILSCKVATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 202 AAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDC 261
+A+RRK+ F + +++ I R +YV +I + T E+LA +F CG V
Sbjct: 43 SALRRKRVFSTKAQVQVQEAVQGGKQKEIERRLYVGNIPRTSTNEELAKIFGECGNVEKA 102
Query: 262 RICGDPNS--VLRFAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ D + RFAF+ + E A+AA+ + GT +G RV+ P++ + L
Sbjct: 103 EVMYDKYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGG---RVIKVNITEKPLDVSGLN 159
Query: 319 RTEDEREMC--ARTIYCTNIDKKVTQADVKLFFES----VCGEVYRLRLLGDYHHSTRIA 372
R +E E +Y N+ K VT +K F + +V R+ G ++
Sbjct: 160 RLTEEAEFIDSPYKVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVS 219
Query: 373 FVEFVMAESAIAALNCSGVVLGSLPIRV 400
F E+AI+A N VVL P+RV
Sbjct: 220 FSSEADVEAAISAFN--NVVLEGKPMRV 245
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R+ A I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
SV G + ++ + ++ FV+F + E+A A++ +G++L + V P
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGP 201
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARA 286
+ ++YV D++ VT+ QL LF GQVV R+C D S L + ++ +++ + A
Sbjct: 22 FVTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL ML F P+ P + + +PT R+ A I+ N+DK + +
Sbjct: 82 ALE----MLNFTPLNGSPIRVMYSHRDPTI-------RKSGAGNIFIKNLDKAIDHKALH 130
Query: 347 LFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F E+A A+ +G++L + V P
Sbjct: 131 DTF-SAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGP 187
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRT--------VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ +++ L QR E+ ++ +Y+ ++D + +E+L LF G + C
Sbjct: 277 GKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKLKELFSPFGTITSC 336
Query: 262 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 302
++ DPN + R + F+ F T EE +RA L + G ++ P+ V
Sbjct: 337 KVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYV 379
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ + V + QL +F G VV R+C D NS L +A++ + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ C G + ++ D +R FV+F ESA +A++ +G+++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 89/216 (41%), Gaps = 30/216 (13%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLR 272
SR+ +E RTV+V + ++ ++L F V Q+V RI G V
Sbjct: 164 SRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV-- 221
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDE 323
++EF DEE + AL L G L P+ V ++ T NP +P
Sbjct: 222 -GYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP----- 275
Query: 324 REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESA 382
+Y NI VT+ D++ FE GE+ ++L D + +R FV+F A A
Sbjct: 276 ----FHRLYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQFRDATQA 330
Query: 383 IAAL-NCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
AL +G L PIRV P + MH
Sbjct: 331 REALEKMNGFDLAGRPIRVGLGNDKFTPESTANLMH 366
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 130 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 189
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ EGA+ AL + G MLG ++V P+ +P
Sbjct: 190 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGAMLGGRNIKV---------GRPSNMP 240
Query: 319 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTR- 370
+ + DE + A++ IY +I +T+ D+K FE+ G + ++ G+ H+ +
Sbjct: 241 QAQQVIDEIQEEAKSYNRIYIASIHPDLTEEDIKSVFEAF-GPIMTCKMSQGNAVHTHKG 299
Query: 371 IAFVEFVMAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
F+E+ +SAI A+ + LG +RV S TP
Sbjct: 300 YGFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 336
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 7/162 (4%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN 289
+ V+V + +T E L F CG++V R+ D F +++F D GA+AAL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE--DEREMCARTIYCTNIDKKVTQADVKL 347
+AGT L + V S P P+ + DE ++T++ N+ + TQ V
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWE 407
Query: 348 FFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
F S G V +R+ D A+VEF +SA A++
Sbjct: 408 SF-SDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVD 448
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 289
R T+YV++ + +E + + F G + D R S RF +I+FT A AAL
Sbjct: 320 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 379
Query: 290 LAGTMLGFYPVRVLP-SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
L + + V P K ++ +PT +T + + +Y T + K V + D++
Sbjct: 380 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 431
Query: 349 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
F S GE+ +R++ D HS AFVEF SA AAL+ + V L I V+ S
Sbjct: 432 F-SQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSMNNVELKKRRIGVTIS 486
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+ +Y++ + + V E+ L LF G++ R+ D + FAF+EF +E A+AAL++
Sbjct: 412 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 471
Query: 291 AGTMLGFYPVRVLPSKT---AIAPVNPTFLPRTE-----DEREMCARTIYCTNIDKKVTQ 342
L + V S ++A N TF T+ D R +R++ +NI + +
Sbjct: 472 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 528
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
A ++ FE G+V + + + A VEF + + A V L PI ++
Sbjct: 529 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDA------GRVFLHKEPIVIND 577
Query: 403 SKTPV 407
K V
Sbjct: 578 QKVEV 582
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARA 286
+ ++YV D+D VT+ QL +F GQVV R+C D + L + ++ +++ + A
Sbjct: 26 FVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAAR 85
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL++ L F P+ P + + +P+ R+ A I+ N+DK + +
Sbjct: 86 ALDV----LNFTPLNGKPIRVMYSHRDPSI-------RKSGAGNIFIKNLDKAIDHKALH 134
Query: 347 LFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ L S FV+F ESA+ A+ +G++L + V P
Sbjct: 135 DTF-SAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGP 191
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T +E +RA + +
Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372
Query: 292 GTML----------------------GFYPVRVLPSKTAIAPVNPTFLP 318
G M+ F +R +P ++AP P + P
Sbjct: 373 GKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 421
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D N+ L +A++ ++ A AL
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE- 99
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 100 ---MLNFTPINGKPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 146
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ C G + ++ D ++ FV++ E+A AA++ +G+++ + V P
Sbjct: 147 TFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGP 202
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D V +++L LF G + C++ D N V R + F+ F + E+ +RA +
Sbjct: 324 LYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN 383
Query: 292 GTMLGFYPVRV 302
M+G P+ V
Sbjct: 384 SKMVGSKPLYV 394
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
EE +RTV+ + + + L F GQV D RI D NS A+IEFTD+
Sbjct: 114 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 173
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
A+ L+G L P+ V+ ++ A N ++ + +Y ++ +T+A
Sbjct: 174 PLAIGLSGQKLLGAPIMVMLTQ---AEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 230
Query: 345 VKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVS 401
VK FE G V ++L+ D + S FV+F AE+A A+ +G L P+++
Sbjct: 231 VKAVFEPF-GTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIG 289
Query: 402 P 402
P
Sbjct: 290 P 290
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 318 PRTEDE-REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFV 374
P TE+ E RT++C + + + D++ FF V G+V +R++ D + S IA++
Sbjct: 107 PMTEESAEEKDQRTVFCMQLARNIRPRDLEEFFSKV-GQVSDVRIISDRNSRRSKGIAYI 165
Query: 375 EFVMAESAIAALNCSGVVLGSLPIRV 400
EF + A+ SG L PI V
Sbjct: 166 EFTDKSAVPLAIGLSGQKLLGAPIMV 191
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEE 282
A + E RTV+V ++D VTE++L A F CG++VD R+ + + +A++EF
Sbjct: 642 AHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAYLEFASAS 701
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVT 341
AL+ ++G P+ V + P+ T D+ ++++ N+D K +
Sbjct: 702 AVNPALSKDRQIMGTRPMLV--DRYVDRSQMPSLPFKHTTDKN---PKSLFVKNLDYKAS 756
Query: 342 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVM-AESAIAALNCSGVVLGSLPIR 399
+A++K F G V +RL+ + S R +V+FV A++A A G +L +R
Sbjct: 757 EAEIKDLFNK-HGAVEAVRLVTKFDGSRRDFCYVDFVTEADAAKAQAALDGHMLHGRALR 815
Query: 400 VSPSKTP 406
V+ SK P
Sbjct: 816 VNISKPP 822
Score = 40.0 bits (92), Expect = 2.1, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST 369
APV P + E E RT++ N+D VT+ +++ F CGE+ +R+ ++
Sbjct: 635 APVAPRQAHKVEAED----RTVFVKNLDFSVTEDELRARFAD-CGEIVDVRMPFNHKGKA 689
Query: 370 R-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 415
+ A++EF A + AL+ ++G+ P+ V + R + P LP
Sbjct: 690 KGYAYLEFASASAVNPALSKDRQIMGTRPMLV--DRYVDRSQMPSLP 734
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R+ A I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
SV G + ++ + ++ FV+F + E+A A++ +G++L + V P
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGP 201
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
R V+V ++D+ + +QL +F G+V+ C++ D + V + + F++F + A N
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 290 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
GT++ + V P F+ R + ++ +Y N+ + T AD+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 349 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSK 404
F GE+ ++ D S R FV F AE+A+ A+ +GVV+ + V ++
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQ 195
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE- 101
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F PV P + + +P+ R+ A I+ N+DK + D K ++
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 148
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ + ++ FV++ ESA A+N +G++L + V P
Sbjct: 149 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 170 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESV 229
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AAL L G L PV V P++ T T+ + + +Y NI +T+ D
Sbjct: 230 AAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQ-QTSVPFHRLYVGNIHFSITEQD 288
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ FE GE+ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 289 LQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFV 377
TEDER+ RT++ + ++ ++K FFE G V +++ D + S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 20/198 (10%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEE 282
++ EE +T+YV ++D VTE+ L LF G V C+I +PN+ +AF+EF + +
Sbjct: 1 MSNSEENYPKTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNND-PYAFVEFVNHQ 59
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA-RTIYCTNIDKKVT 341
A AL + VL + VN P + +++ + I+ ++ ++
Sbjct: 60 AASTAL------IAMNKRHVLEKEIK---VNWATSPGNQPKQDTSSHHHIFVGDLSPEIE 110
Query: 342 QADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSL 396
++ F GE+ R++ D S AFV FV AESAI A+N G LG+
Sbjct: 111 MHTLREAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMN--GQWLGNR 167
Query: 397 PIRVSPS-KTPVRPRAPR 413
IR + S + P PR R
Sbjct: 168 SIRTNWSTRKPPPPRTER 185
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 181 RTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 240
Query: 389 SGVVLGSLPIRV 400
+GVV G P+++
Sbjct: 241 NGVVFGDRPLKI 252
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 179 IRRTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 238
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G + G P+++ S AI
Sbjct: 239 AFNGVVFGDRPLKINHSNNAI 259
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 170 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESV 229
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AAL L G L PV V P++ T T+ + + +Y NI +T+ D
Sbjct: 230 AAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQ-QTSVPFHRLYVGNIHFSITEQD 288
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ FE GE+ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 289 LQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFV 377
TEDER+ RT++ + ++ ++K FFE G V +++ D + S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
+E +T+YV ++D V E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL + + + + A +P N P+T+ I+ ++ ++ ++
Sbjct: 62 ALIAMNKRV--FLDKEMKVNWATSPGN---QPKTDTSNH---HHIFVGDLSPEIETDTLR 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVS 401
F GE+ R++ D S AFV FV AE+AI A+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMN--GQWLGSRSIRTN 170
Query: 402 PS-KTPVRPRA 411
S + P PRA
Sbjct: 171 WSTRKPPPPRA 181
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 170 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESV 229
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AAL L G L PV V P++ T T+ + + +Y NI +T+ D
Sbjct: 230 AAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQ-QTSVPFHRLYVGNIHFSITEQD 288
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ FE GE+ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 289 LQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRV 345
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFV 377
TEDER+ RT++ + ++ ++K FFE G V +++ D + S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
+Y+ ++++ + + + F G +++C + D + R + F++F EE ARAA+ +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 349
G + V V+ ++PR + E+E R +Y N ++ ++ ++K F
Sbjct: 190 GILCNSQKVHVV-----------KYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMF 238
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLGSLPIRVS 401
E G + +++ D S R FV F +SA+AA + +G LG + V+
Sbjct: 239 EPY-GRITSHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVA 291
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARA 286
+ ++YV D++ VT+ QL LF GQVV R+C D S L + ++ +++ + A
Sbjct: 22 FVTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL + L F PV P + + +P+ R+ A I+ N+DK + +
Sbjct: 82 ALEV----LNFTPVNGSPIRVMYSHRDPSV-------RKSGAGNIFIKNLDKAIDHKALH 130
Query: 347 LFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F SV G + ++ D S FV+F E+A A+ +G++L + V P
Sbjct: 131 DTF-SVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGP 187
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRT--------VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ +++ L QR E+ ++ +Y+ ++D + +E++ LF G + C
Sbjct: 277 GKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSC 336
Query: 262 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 302
++ DPN + R + F+ F T EE +RA L + G M+ P+ V
Sbjct: 337 KVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYV 379
>gi|296475869|tpg|DAA17984.1| TPA: splicing factor, arginine/serine-rich 12-like [Bos taurus]
Length = 325
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVTE-EQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 132 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 191
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 192 AFNGVMFGDRPLKINHSNNAI 212
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 134 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 193
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 194 NGVMFGDRPLKI 205
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+D V+E +L +F GQVV R+C D L +A++ + + A AL L
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALEL 86
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
T++ P+R++ S R R+ A I+ N++K + + F
Sbjct: 87 LNFTLVKGKPIRIMYSH------------RDPSIRKSGAANIFIKNLEKSIDNKALHDTF 134
Query: 350 ESVCGEVYRLR-LLGDYHHSTRIAFVEFVMAESA-IAALNCSGVVLGSLPIRVSP 402
S G + R ++ D +S FV+F ESA IA +G+++ + V+P
Sbjct: 135 -SAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNGMLINDRQVSVAP 188
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD-EEGARAALNLA 291
VYV ++ + T+E L +F G G + + D + + F F+ F + ++ A A NL
Sbjct: 206 VYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENLN 265
Query: 292 GTMLG---FYPVRVLPSKTAIAPVNPTFLP-RTEDEREMCARTIYCTNIDKKVTQADVKL 347
G ++ +Y R A + F R E E + +Y NID + ++
Sbjct: 266 GKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSIDDEKLRE 325
Query: 348 FFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
F +V G V +++ S FV F E A+ A+N +G ++GS P+ V+
Sbjct: 326 LF-AVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPLYVA 380
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 189 NNHNARNGNVNANAAVRRKKSF--GQGKRRMNSRTSLAQREEIIRR---------TVYVS 237
N +A N N N + +K + G+ +++ L + E +R+ +Y+
Sbjct: 253 NVDDAANAVENLNGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLK 312
Query: 238 DIDQQVTEEQLAALFVGCGQVVDCRICGDPNS-VLRFAFIEFTDEEGARAALN-LAGTML 295
+ID + +E+L LF G V C++ P + F+ F+ E A A+N + G M+
Sbjct: 313 NIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMV 372
Query: 296 GFYPVRV 302
G P+ V
Sbjct: 373 GSKPLYV 379
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGND-PYAFIEYSTYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLDKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|86170621|ref|XP_966051.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|46362293|emb|CAG25231.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 582
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 212 QGKRRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN 268
Q KR ++ + SL ++ ++ + VY+ +I ++ EE + A F G ++ +
Sbjct: 131 QKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNVGNTTSYKLQYNEQ 190
Query: 269 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPV 300
+ AF+EF +EE A+AALNL+GT +G + +
Sbjct: 191 KKVHTAFVEFKNEEHAKAALNLSGTKVGLHEI 222
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 49/213 (23%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
I VYV ++ +TEE + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSSDITEENIREKFGSCDEIISITFKNFPGLNQKYCQIEFKTSEGITNASR 66
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER------------------------- 324
L G L P+ V + I N + L TE ++
Sbjct: 67 LNGESLLNVPMVVSVIEPIINNTNLSELSTTECDKNVNSLLDVRNSITNQGVQTLLLQKQ 126
Query: 325 -----------------------EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL 361
++ ++ +Y NI +K + D+K FF++V G +L
Sbjct: 127 VISEQKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNV-GNTTSYKL 185
Query: 362 LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLG 394
+ AFVEF E A AALN SG +G
Sbjct: 186 QYNEQKKVHTAFVEFKNEEHAKAALNLSGTKVG 218
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RT+YV ++D VTEE L A+F GQV C+I +P + + F+EF+D + A +AL
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASALLAM 71
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L F + + A +P N P+ + + I+ ++ ++ ++ F
Sbjct: 72 NKRLCF--GKEMKVNWATSPGN---TPKLDTSKH---HHIFVGDLSPEIETTQLRDAFAP 123
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
G++ R++ D S FV FV AE+AI +N G LGS IR
Sbjct: 124 F-GDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMN--GQWLGSRAIRT 174
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 206 RKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG 265
R+ S+ G +T +E RRTV+V + ++ +L F G VVD +I
Sbjct: 210 RRHSYRGGDGGNKRKTPEPTDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVK 269
Query: 266 DPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 323
D S ++EF DEE + A+ L G L P+ IA + TE E
Sbjct: 270 DRVSGRSKGVGYVEFKDEESVQKAIGLTGQKLLGIPI--------IAQL-------TEAE 314
Query: 324 REMCART---------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-H 367
+ ART +Y NI +T+AD+K FE GE+ +L + +
Sbjct: 315 KNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPF-GELEFAQLQKEENGR 373
Query: 368 STRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
S FV+F+ A AL +G L PIRV
Sbjct: 374 SKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRV 407
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 20/175 (11%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNLA 291
+YV D+D V + QL +F G VV R+C D N+ L +A++ F+ A AL
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 101
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE- 350
ML F PV P + + +P+ R+ A I+ N+DK + D K ++
Sbjct: 102 --MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYDT 149
Query: 351 -SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ + ++ FV++ ESA A+N +G++L + V P
Sbjct: 150 FSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
R V+V ++D+ + +QL +F G+V+ C++ D + V + + F++F + A N
Sbjct: 101 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 160
Query: 290 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
GT++ + V P F+ R + ++ +Y N+ + T AD+K
Sbjct: 161 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 209
Query: 349 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSK 404
F GE+ ++ D S R FV F AE+A+ A+ +GVV+ + V ++
Sbjct: 210 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQ 266
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 45 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 101
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 102 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 132
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E+ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 47 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 105
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 106 KESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
+ + +VYV D++ V+E QL +F G VV R+C D L +A++ + + A
Sbjct: 20 QFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDAT 79
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL L L F PV P + + +P+ R+ A I+ N+DK + +
Sbjct: 80 RALEL----LNFTPVNGKPIRIMFSHRDPSL-------RKSGAANIFIKNLDKAIDNKAL 128
Query: 346 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F ESA +A+ +G++L + V P
Sbjct: 129 HDTF-SAFGGILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGP 186
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D V +E+L LF G + C++ DP R + F+ F T EE RA +
Sbjct: 308 LYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMN 367
Query: 292 GTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 318
M+G P+ V + +T + P PT LP
Sbjct: 368 TKMVGSKPLYVALAQRKEERRVRLQAAFAQMRTPVGPTVPTSLP 411
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 289
R T+YV++ + +E + + F G + D R S RF +I+FT A AAL
Sbjct: 732 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 791
Query: 290 LAGTMLGFYPVRVLP-SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
L + + V P K ++ +PT +T + + +Y T + K V + D++
Sbjct: 792 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 843
Query: 349 FESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
F S GE+ +R++ D HS AFVEF SA AAL+ + V L I V+ S
Sbjct: 844 F-SQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSMNNVELKKRRIGVTIS 898
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+ +Y++ + + V E+ L LF G++ R+ D + FAF+EF +E A+AAL++
Sbjct: 824 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 883
Query: 291 AGTMLGFYPVRVLPSKT---AIAPVNPTFLPRTE-----DEREMCARTIYCTNIDKKVTQ 342
L + V S ++A N TF T+ D R +R++ +NI + +
Sbjct: 884 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 940
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
A ++ FE G+V + + + A VEF + + A V L PI ++
Sbjct: 941 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDA------GRVFLHKEPIVIND 989
Query: 403 SKTPV 407
K V
Sbjct: 990 QKVEV 994
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV D+D VT+ QL F GQVV R+C D + L + ++ FT ++ ARA
Sbjct: 41 SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQE 100
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L PVRV+ S R R A I+ N+DK + + F
Sbjct: 101 LNYIPLNGKPVRVMYSH------------RDPSVRRSGAGNIFIKNLDKSIDHKALHDTF 148
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
SV G + ++ D ++ FV++ ESA A+ +G++L + V P
Sbjct: 149 -SVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGP 202
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D V++E+L LF G V C++ DPN + R + F+ F T EE +A ++
Sbjct: 324 LYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMS 383
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 384 GKMIENKPLYV 394
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQSAAT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A LA + + + A +P N P+ + I+ ++ ++ +K
Sbjct: 62 A--LAAMNKRSFLDKEMKVNWATSPGN---QPKLDTSNH---HHIFVGDLSPEIETQTLK 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRV 400
F GE+ R++ D S AFV FV A AA+N +G LGS IR
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRT 169
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + ++ F++ + A
Sbjct: 24 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 83
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL++ L F P+ P + + +P+ R+ I+ N+D+ + +
Sbjct: 84 RALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDRAIDHKAL 132
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D ++ FV+F ESA A+ +G++L + V P
Sbjct: 133 HDTF-STFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 190
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D + +++L LF G + C++ DPN + R + F+ F T +E +RA L +
Sbjct: 312 LYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMN 371
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 372 GKMVVSKPLYV 382
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + ++ F++ + A
Sbjct: 27 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 86
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL++ L F P+ P + + +P+ R+ I+ N+D+ + +
Sbjct: 87 RALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDRAIDHKAL 135
Query: 346 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F ESA A+ +G++L + V P
Sbjct: 136 HDTF-STFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 193
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D + +E+L LF G + C++ DPN + R + F+ F T EE +RA L +
Sbjct: 315 LYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMN 374
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 375 GKMVVSKPLYV 385
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 22/186 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF +EE
Sbjct: 189 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 248
Query: 285 RAALNLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
AAL L G L PV V P+ + + + +P +P +Y NI
Sbjct: 249 AAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIP---------FHRLYVGNI 299
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLG 394
+T+ D++ FE GE+ ++L D +R FV+F A A AL +G L
Sbjct: 300 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDASQAREALEKMNGFDLA 358
Query: 395 SLPIRV 400
PIRV
Sbjct: 359 GRPIRV 364
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 50 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 106
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 107 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 137
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 110
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 111 KESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 86/208 (41%), Gaps = 30/208 (14%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLRFAFIEFTD 280
+E RTV+V + ++ ++L F V Q+V RI G V ++EF D
Sbjct: 168 DERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV---GYVEFKD 224
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTI 331
EE + AL L G L P+ V ++ T NP +P +
Sbjct: 225 EETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP---------FHRL 275
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CS 389
Y NI VT+ D++ FE GE+ ++L D + +R FV+F A A AL +
Sbjct: 276 YVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMN 334
Query: 390 GVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
G L PIRV P + MH
Sbjct: 335 GFDLAGRPIRVGLGNDKFTPESTANLMH 362
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 133
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A LA + + + A +P N L + I+ ++ ++ +K
Sbjct: 134 A--LAAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 185
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRVSPS 403
F GE+ R++ D S AFV FV A AA+N +G LGS IR + S
Sbjct: 186 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 244
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR-TVYVSDIDQQ 242
+S F ++ R A + ++ FGQ R+N + QRE+ ++V D+ +
Sbjct: 99 SSYGFVDYYERGSAALAILQLNGRQIFGQ-PIRVNWAYASGQREDTTDHFNIFVGDLSAE 157
Query: 243 VTEEQLAALFVG-CGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTMLGFY 298
VT+ L A F G D R+ D + + F+ F +++ A++A+N L G LG
Sbjct: 158 VTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNR 217
Query: 299 PVRV-LPSKTA-------------IAPVNPTFLPRTEDEREMC----------ARTIYCT 334
+R +K A IA V F TED +E RT+Y
Sbjct: 218 QIRCNWATKGANSVEDQQTSDSKSIAGVTNNF---TEDGKEKANEDAPENNPLYRTVYVG 274
Query: 335 NIDKKVTQADVKLFFESV-CGEVYRLRLLGDYHHSTRIAFVEFV-MAESAIAALNCSGVV 392
N+ + TQ + FF ++ G + +R+ H FV++ AE+A+A +G +
Sbjct: 275 NLAHEATQDVLHRFFYALGAGAIEEVRV----QHGKGFGFVKYSSHAEAALAIQMGNGCI 330
Query: 393 LGSLPIRVS 401
LG PI+ S
Sbjct: 331 LGGKPIKCS 339
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 17/172 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDE-EGARAALNL 290
R+VYV +I VTE L +F G V C++ S + F+++ + A A L L
Sbjct: 62 RSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEKS--SYGFVDYYERGSAALAILQL 119
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
G + P+RV + + + ED + I+ ++ +VT + + FF
Sbjct: 120 NGRQIFGQPIRVNWAYAS---------GQREDTTDHF--NIFVGDLSAEVTDSALFAFFS 168
Query: 351 SVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIR 399
R++ D S FV F + A +A+N +G LG+ IR
Sbjct: 169 GYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIR 220
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 50 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 106
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 107 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 137
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 110
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 111 KESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 16/191 (8%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 291
TV+VS++D + TEE + + F G +VD R+ P R + F+EF+ E A+ AL L
Sbjct: 689 TVFVSNLDFKATEEMIRSQFEQIGNIVDVRLVRKPTGRSRGYGFVEFSSPEAAQKALALD 748
Query: 292 GTMLGFYPVRVLPS----KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
+ P+ V PS K P P + + +T++ N+ + D+
Sbjct: 749 RQPVLNRPMYVSPSVDKPKDGDGPA-----PSRYAQDGVDPKTLFVRNLSSLCRRDDLVT 803
Query: 348 FFESVCGEVYRLRLLGDYHHSTRI---AFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
FE +V +R+ H R A+VEF E A AL G V+ PI
Sbjct: 804 TFEKF-AKVVDVRMT--RHRDGRFTGRAYVEFANEEDAKLALAADGTVVRGQPISAQVCN 860
Query: 405 TPVRPRAPRLP 415
P + A P
Sbjct: 861 PPTKAAASETP 871
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Query: 213 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDP 267
G R T + +E RRTV+V + ++ +L A F G Q+V RI G
Sbjct: 140 GPRDKQDATPVLNEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRS 199
Query: 268 NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
V ++EF +E+ AL L G L PV V ++ T P +
Sbjct: 200 KGV---GYVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHVP 256
Query: 328 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y NI VT+ D++ F+ GE+ ++L D + +R FV+F A A AL
Sbjct: 257 FHRLYVGNIHFNVTEQDLQAVFDPF-GELEFVQLQKDETNRSRGYGFVQFRDAGQAREAL 315
Query: 387 -NCSGVVLGSLPIRV 400
+G L PIRV
Sbjct: 316 EKMNGFDLAGRPIRV 330
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E+ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 164 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCAAT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A LA + + + A +P N L + I+ ++ ++ +K
Sbjct: 62 A--LAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRVSPS 403
F GE+ R++ D S AFV FV A AA+N +G LGS IR + S
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 172
>gi|148686564|gb|EDL18511.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Mus
musculus]
Length = 223
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 230 IRRTVYVSDIDQQVT-EEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
IRRTVYV +++ Q T +QL F G+V R+ GD RFAF+EF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 289 NLAGTMLGFYPVRVLPSKTAI 309
G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT+Y N++ + T AD L F GEV +R+ GD TR AFVEF S AL
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 153
Query: 389 SGVVLGSLPIRV 400
+GV+ G P+++
Sbjct: 154 NGVMFGDRPLKI 165
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAALN 289
++YV D++ V++ QL LF GQVV R+C D S L +A++ F++ + ARA
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L +L P+RV+ S R R + I+ N+DK + + F
Sbjct: 107 LNFAVLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 154
Query: 350 ESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ + + S FV++ E+A A+ + +G+++ P+ V P
Sbjct: 155 SSF-GTILSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP 208
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
+ ++YV D+D VT+ QL LF GQVV R+C D S L + ++ +++ A A
Sbjct: 27 VTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRA 86
Query: 288 LN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L+ L T L P+RV+ S R R+ + I+ N+DK + +
Sbjct: 87 LDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLDKAIDHKALH 134
Query: 347 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F E+A+ A+ +G++L + V P
Sbjct: 135 DTF-SAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGP 191
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 291
+YV ++D + +++L LF G G + C++ DPN + R + F+ F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 47/221 (21%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN--- 289
TV+V+D+ +QVTE++L +LF CG + + +I PN+V+ A +EF + + AAL
Sbjct: 669 TVFVADLPEQVTEDELKSLFKDCGSIREVKITKLPNAVV--ALVEFFERDSVPAALTKDK 726
Query: 290 --LAGTMLGF---YPVRVLPSK---------------------------TAIAPVNP--T 315
L G + + + VR PSK + P P
Sbjct: 727 KRLQGQEISYGMLFDVR-WPSKKFKTTRRFCYVQFTSPDAAQQALELHRKELEPNLPLNV 785
Query: 316 FLPRTEDEREMC-----ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HST 369
++ E ++E R +Y + K T+AD++ F + G+V +R+ + H+
Sbjct: 786 YISNPERKKERTDHDANEREVYVAGLSKFTTKADLEKLF-ATYGKVKDVRMATEQDGHAR 844
Query: 370 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR 410
AFVE+ + A AL+ + L I V+ + VR R
Sbjct: 845 GYAFVEYEEPQDARRALDANNYELKKRRIAVTLADPRVRAR 885
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 13/175 (7%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
R VYV+ + + T+ L LF G+V D R+ + + R +AF+E+ + + AR AL+
Sbjct: 804 REVYVAGLSKFTTKADLEKLFATYGKVKDVRMATEQDGHARGYAFVEYEEPQDARRALDA 863
Query: 291 AGTMLGFYPVRVL---PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L + V P A + T L R E+ +R+I N+ + ++
Sbjct: 864 NNYELKKRRIAVTLADPRVRARHNKSETGLGRNA---EIRSRSIRVRNLPPNTQEGLLQQ 920
Query: 348 FFESVCGEVYRLRLLGDYHHSTRIAFVEF-VMAESAIAALNCSGVVLGSLPIRVS 401
FE V V R+ + D R A VE AE+ L +V + +++S
Sbjct: 921 TFEKVAA-VRRVEVFAD----KREAAVELETAAEAGKLLLRTEPLVFNDVILQLS 970
>gi|224128984|ref|XP_002328861.1| predicted protein [Populus trichocarpa]
gi|222839291|gb|EEE77628.1| predicted protein [Populus trichocarpa]
Length = 950
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A++E+ +++T++VS++ +T EQL LF CG VV+C I +S A+IE++ E
Sbjct: 341 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECTIADSKHS----AYIEYSKPEE 396
Query: 284 ARAALNLAGTMLGFYPVRVLPSKT 307
A AAL L +G P+ V +K+
Sbjct: 397 ATAALALNNMDVGGRPLNVETAKS 420
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ I + E + F G+V D R+ D NS +IEF D A+
Sbjct: 222 QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 281
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTF-----LPRTEDEREMCARTIYCTNIDKKVTQA 343
L+G L PV V PS+ V T L AR +Y N+ +T+A
Sbjct: 282 ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEA 341
Query: 344 DVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVV-LGSLPIRVS 401
D++ FE+ G+V ++L L + H FV+F E A A + +G + +G I+VS
Sbjct: 342 DIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVS 400
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ I K + DV FF S G+V +RL+ D + S + ++E
Sbjct: 214 PEADPERDQ--RTVFAYQISLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYIE 270
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
F S A+ SG L P+ V PS+
Sbjct: 271 FYDVMSVPMAIALSGQPLLGQPVMVKPSEA 300
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
+ ++YV D+D VT+ QL LF GQVV R+C D S L + ++ +++ A A
Sbjct: 27 VTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRA 86
Query: 288 LN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L+ L T L P+RV+ S R R+ + I+ N+DK + +
Sbjct: 87 LDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLDKAIDHKALH 134
Query: 347 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F E+A+ A+ +G++L + V P
Sbjct: 135 DTF-SAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGP 191
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 291
+YV ++D + +++L LF G G + C++ DPN + R + F+ F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLDKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 51 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 107
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT--FLPRT 320
EF+D+E R +L L ++ ++V+P +T ++ T PRT
Sbjct: 108 EFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRT 153
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D + H A++EF
Sbjct: 53 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHPKGFAYIEFSD 111
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 112 KESVRTSLALDESLFRGRQIKVIPKRT 138
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 18/186 (9%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 289
R T+YV++ ++V +E++ +F G + D R + RF +++FT + A+A+L
Sbjct: 723 RSTLYVTNFPERVDDEEVRKIFGKYGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLE 782
Query: 290 LAGTMLG-FYPVRVLPSKTAIAPVNPTFLPRTEDER---EMCARTIYCTNIDKKVTQADV 345
L G L P+ V S P + ER + AR +Y + + K ++D+
Sbjct: 783 LHGHELEPNLPLNVYISN-----------PERKKERTDADANAREVYVSGLSKFADKSDL 831
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
+ F++ G + +R+ D ++ AFVEF + A+ ALN + L + + V+ S
Sbjct: 832 ERVFKTY-GPIKEIRMTVDEQGRSKGFAFVEFEQEKDALNALNANNHELKARRMAVTMSD 890
Query: 405 TPVRPR 410
+ VR R
Sbjct: 891 SRVRSR 896
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 28/171 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TV+V+D+ T++ L ALF CG + D +I PN+ A +EF++ E AAL
Sbjct: 651 TVFVADLPSNTTDDDLKALFKDCGSIRDIKITSLPNT--HVATVEFSERESVPAALTKDK 708
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-TIYCTNIDKKVTQADVKLFFES 351
+ V V + R T+Y TN ++V +V+ F
Sbjct: 709 KRINGEEVAV----------------------HLAWRSTLYVTNFPERVDDEEVRKIF-G 745
Query: 352 VCGEVYRLRLLGDYHHST-RIAFVEFVMAESAIAALNCSGVVLG-SLPIRV 400
G ++ +R +T R +V+F ++A A+L G L +LP+ V
Sbjct: 746 KYGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLELHGHELEPNLPLNV 796
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-GDPNSVLRFAFIEFTDEEGARAALNL 290
+T++V ++ V +++ F G+V D R D S FA +EF E A+ A L
Sbjct: 465 KTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYEL 524
Query: 291 AGTMLGFYPVRV--LPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
G L PVR+ + AI P N +F ++ + T + D + + +
Sbjct: 525 NGHDLSGRPVRLDFARERGAITPGSGRDNSSF------KKSGQSNTAFVRGFDSSLGEDE 578
Query: 345 VKLFFE---SVCGEVYRLRLLGDYHHSTR--IAFVEFVMAESAIAALNCSGVVLGSLPIR 399
++ + S CG + R+ + DY T IA+VEF S AL +G +G +
Sbjct: 579 IRSSLQEHFSSCGAIGRVSIPKDYETGTSKGIAYVEFTDGNSLPKALELNGSNIGEFSLF 638
Query: 400 VSPSKTPVRPRA 411
V +K PRA
Sbjct: 639 VDEAK----PRA 646
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 222 SIEERMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 278
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 279 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 309
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E+ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 224 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 282
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 283 KESVRTSLALDESLFRGRQIKVIPKRT 309
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLDKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 214
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 215 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 245
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 111 VLMKQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQSFLPFGPIKSI 170
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P +
Sbjct: 171 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQAVID 229
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
++E + R IY +I +T+ D+K FE+ +Y +L H F+E+
Sbjct: 230 EIQEEAKQYNR-IYVASIHPDLTEDDIKSVFEAFGPIIYCKLAQGSSGHKHKGYGFIEYE 288
Query: 378 MAES---AIAALNCSGVVLGSLPIRVSPSKTP 406
A++ AIA++N LG +RV + TP
Sbjct: 289 TAQAANEAIASMNLFD--LGGQYLRVGRAITP 318
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 220 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-------------- 265
R S ++ + RT+YV ++ +++T + + LF G++ R+ G
Sbjct: 320 RLSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVAT 379
Query: 266 -----DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRT 320
P + ++ F +E+ A+ AL L G LG +RV S T
Sbjct: 380 ITKKMHPKVSTVYVYVAFKEEQSAKDALKLNGHKLGENTLRVDLS--------------T 425
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH--STRIAFVEFVM 378
+++ R ++ NI +T+ +V+ F+S CG++ +R++ D S I +V F
Sbjct: 426 KNKDHDQKRAVFLGNIPFDITEDEVRKHFDS-CGKIESVRIVKDRKSGLSRGIGYVNFEN 484
Query: 379 AESAIAALNCSGVVLGSLPIRV 400
+S AL +G L + IRV
Sbjct: 485 QDSVTLALELNGTNLKNREIRV 506
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 214
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 215 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 245
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARA 286
+ ++YV D++ V+E QL LF GQVV R+C D L +A++ + + A
Sbjct: 25 FVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATR 84
Query: 287 ALNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL L ++L P+R++ F R R+ I+ N+DK + +
Sbjct: 85 ALELLNFSVLNGNPIRIM------------FSHRDPSIRKSGTANIFIKNLDKTIDNKAL 132
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F + G + + S FV+F ESA+ A+ +G++L + V P
Sbjct: 133 HDTFSAFGGILSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGP 190
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 23/117 (19%)
Query: 225 QREEIIRR----TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFT 279
+R+E I + +Y+ ++D V +E+L LF G + C++ DP R + F+ F+
Sbjct: 299 ERKERIEKYQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFS 358
Query: 280 D-EEGARAALNLAGTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 318
EE RA + G M+G P+ V + +T+++P PT LP
Sbjct: 359 SPEEATRAVTEMNGKMVGSKPLYVALAQRKEERRARLQAAFAQMRTSVSPAVPTSLP 415
>gi|391329197|ref|XP_003739062.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Metaseiulus occidentalis]
Length = 399
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
E IRRT+YV ++D +T E + F CG++ R+ G+ + ++ AF+EFT++ A
Sbjct: 164 EEIRRTIYVGNLDPNLTNEIVMKFFSQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNA 223
Query: 288 LNLAGTMLG 296
GT+LG
Sbjct: 224 FQFNGTLLG 232
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 310 APVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 368
AP P DE E RTIY N+D +T V FF S CGE+ +R+ G+ S
Sbjct: 148 APNYPALPAGLSDENVEEIRRTIYVGNLDPNLTNEIVMKFF-SQCGEIKYVRMGGETGAS 206
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
+ AFVEF S A +G +LGS + VS S
Sbjct: 207 MKHAFVEFTEQASVGNAFQFNGTLLGSRAMVVSHS 241
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL----RFAFIEFTDEEGARAA 287
R + VS+I V+ EQL ALF G V DCR+ L R +I+F + A
Sbjct: 8 RVIQVSNIASGVSREQLLALFNHVGSVEDCRLYPSVEQPLENGTRICYIKFKELWSVGVA 67
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAP 311
++L+ T+ P+ + P + P
Sbjct: 68 MHLSNTIFMERPLLIFPMDSDQVP 91
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 160 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 216
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 217 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 247
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 162 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 220
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 221 KESVRTSLALDESLFRGRQIKVIPKRT 247
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 158 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 214
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 215 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 245
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGNQ---PKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRPRAPRLP 415
+ P PR P
Sbjct: 175 LPP--PREP 181
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+++ VTE L +F G V R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKSI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F+ S+ G + ++ D + S FV + ESA A+ +GV LGS + V P
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGP 178
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 35/194 (18%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEG 283
+EE +RTV+V + + +QL A F G VV+ +I D S ++EF DEE
Sbjct: 206 QEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEES 265
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART------------- 330
+ AL L G L P+ + TE E+ ART
Sbjct: 266 VQKALELTGQKLMNIPI---------------IVQLTEAEKNRQARTSEGQPTQSNGIPF 310
Query: 331 --IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFVMAESAIAAL- 386
+Y NI + ++D++ FE GE+ ++L D S FV+F ++ A AL
Sbjct: 311 HRLYVGNIHFSIEESDLRDVFEPF-GELEFVQLQKEDTGRSKGYGFVQFAKSDEAKIALE 369
Query: 387 NCSGVVLGSLPIRV 400
+G + PIRV
Sbjct: 370 KMNGFEVAGRPIRV 383
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 289
+TV+V + V + LA F CG+VV R+ D N+ F F+EF EGA AA+
Sbjct: 321 KTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAEGANAAVA 380
Query: 290 LAGTM-LGFYPVRVLPSKTAIAPVNPTFLPRT-EDEREMCARTIYCTNIDKKVTQADVKL 347
L G + V + KT+ P +P + D + ++ N+ +T+ +
Sbjct: 381 LNGQKEIDGRAVNL--DKTSAKPADPERRAKAFGDSTSAPSSVLFVGNVSFDMTEDGLWE 438
Query: 348 FFESVCGEVYRLRLLGDYHHSTRI---AFVEFVMAESAIAALNCS-GVVLGSLPIRV 400
F + GEV +RL D + R+ +VEFV ESA A + G+ +G IR+
Sbjct: 439 VF-AEYGEVKSVRLPTD-RDTQRLKGYGYVEFVDVESAKKAFEGARGMDVGGRTIRL 493
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 190 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
+H A N NV+ GQ +N+ S A + ++YV D+ Q VTE L
Sbjct: 45 DHTAGNANVSGGGVSGTAPPAGQRPNGLNAAASAA---NFVSPSLYVGDLHQDVTEAMLF 101
Query: 250 ALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSK 306
+F G V R+C D + L +A++ + + A +L+ L T++ P R++
Sbjct: 102 EVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM--- 158
Query: 307 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGD 364
+ R R+ I+ N+DK + D K ++ S+ G + ++ D
Sbjct: 159 ---------WCHRDPSLRKSGNGNIFVKNLDKNI---DNKALYDTFSLFGNILSCKVAVD 206
Query: 365 YH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ HS FV + ESA +A++ +G+++G + V P
Sbjct: 207 ENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGP 246
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 90
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 91 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 121
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 94
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 95 KESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 45 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 101
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 102 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 132
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 47 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 105
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 106 KESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 34 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 90
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 91 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 121
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 94
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 95 KESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|326517609|dbj|BAK03723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 990
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A++ E +++ V +S++ +T E + LF CG+VVDC I A++E++ E
Sbjct: 357 AEKAEALKKIVQISNLSPVLTVENIKQLFGYCGKVVDCTIT----ESKHIAYVEYSKPEE 412
Query: 284 ARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 313
A AAL L+ +G P+ V LP KT+IA N
Sbjct: 413 ATAALALSNVDVGGRPLNVEMAKSLPQKTSIANSN 447
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+++ VTE L +F G V R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ A I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGAGNIFVKNLDKSI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
F+ S+ G + ++ D + S FV + ESA A+ +G+ LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYV 176
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF +EE
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 285 RAALNLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
AAL L G L PV V P+ + + +P +P +Y NI
Sbjct: 244 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNSVP---------FHRLYVGNI 294
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLG 394
+T+ D++ FE GE+ ++L D +R FV+F A A AL +G L
Sbjct: 295 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLA 353
Query: 395 SLPIRV 400
PIRV
Sbjct: 354 GRPIRV 359
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T DER+ RT++ + ++ ++K FFE V G V +++ D + S + +VEF
Sbjct: 182 TGDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVEFK 238
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +P+ V P++
Sbjct: 239 NEESVAAALQLTGQKLLGIPVIVQPTE 265
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 20 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 76
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 77 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 107
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 22 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 80
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 81 KESVRTSLALDESLFRGRQIKVIPKRT 107
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 246 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 276
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 249
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 250 KESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRP 409
+ P
Sbjct: 175 LPP 177
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA-LNL 290
+ V+ ++ +E+++ LF G + +I + AFI F D A AA NL
Sbjct: 117 KIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKII----PAKQCAFITFGDVNAAIAAQYNL 172
Query: 291 AGTMLGFYPVRVLPSKTAIAPV-------NPTF-LPRTEDEREMCARTIYCTNIDKKVTQ 342
GT + YP+++ K AP P F P + E+ + ++ NI VT
Sbjct: 173 NGTPIRGYPLKLGFGKVENAPAAFQQQQQQPHFNKPPHHLQEEVPTKNLWLGNIGPSVTS 232
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVS 401
+K F+ G V +R+L AFV F ESAIAA N +G ++ +P++++
Sbjct: 233 ETLKQLFDQF-GNVDNIRILV----GRGCAFVNFFTVESAIAARNNLTGTMVCGMPLKIN 287
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 144 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 200
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 201 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 231
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 146 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 204
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 205 KESVRTSLALDESLFRGRQIKVIPKRT 231
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VT+ QL LF QVV R+C D + L + ++ +TD E A AL++
Sbjct: 170 SLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALDV 229
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 230 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKGIDHKALHDTF- 277
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ D ++ FV+F E+A A++ +G++L + V P
Sbjct: 278 SAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGP 331
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 291
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F+ EE +RA +
Sbjct: 453 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 512
Query: 292 GTMLGFYPVRV 302
M+ P+ V
Sbjct: 513 SKMVVSKPLYV 523
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + ++ +++ + A AL+L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 351 SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN 387
S G + ++ D S FV+F ESA A++
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAID 164
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 90 RIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYG 149
Query: 275 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 330
F++F +EE A+ A++ L G ++ V V FL + E E +
Sbjct: 150 FVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFNN 198
Query: 331 IYCTNIDKKVTQADVKLFF 349
+Y N+ + T+ D+K F
Sbjct: 199 VYVKNLSESTTEEDLKNIF 217
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + +++L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + ++ +++ + A AL+L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 351 SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN 387
S G + ++ D S FV+F ESA A++
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAID 164
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 90 RIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYG 149
Query: 275 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 330
F++F +EE A+ A++ L G ++ V V FL + E E +
Sbjct: 150 FVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFNN 198
Query: 331 IYCTNIDKKVTQADVKLFF 349
+Y N+ + T+ D+K F
Sbjct: 199 VYVKNLSESTTEEDLKNIF 217
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + +++L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 187
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 188 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 218
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 133 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 191
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 192 KESVRTSLALDESLFRGRQIKVIPKRT 218
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 64 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 120
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 121 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 151
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 66 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 124
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 125 KESVRTSLALDESLFRGRQIKVIPKRT 151
>gi|449487626|ref|XP_004157720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203535
[Cucumis sativus]
Length = 936
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA+IE++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFXFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 288 LNLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 316
L L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-N 289
R +Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+
Sbjct: 113 RKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEK 172
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKL 347
+ G + V V+ F+PR + E+E + +Y N+ ++ T+ ++
Sbjct: 173 VNGMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLGEEFTEQHLRE 221
Query: 348 FFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
FE +L D S R FV + +SA+AA + G LG
Sbjct: 222 MFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 229 IIRRTVYVSD--IDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF---TDE 281
+ R +V+V D +D EE + LF VV ++C D L + ++ F D
Sbjct: 5 VQRTSVFVGDLPVDLPRPEEAINNLFSSIAPVVSVKVCRDIATQRSLGYGYVNFQTTADA 64
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
E ALN G G Y +RV+ F R +R+ A I+ +D V+
Sbjct: 65 EKVIDALNFTGIAPGRY-IRVM------------FAIRDPLQRKSGANNIFVKKLDAAVS 111
Query: 342 QADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
++ F S CG V ++ D HS FV+F A+ A AAL+ +G +G + V
Sbjct: 112 AKALQAAF-SRCGRVLSCKVALDSEGHSKGYGFVQFETADGAKAALDMNGAKVGDSEVEV 170
Query: 401 SP 402
+P
Sbjct: 171 AP 172
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL 288
R +YV + +T+++L +F G++ C I + N LR FAF+ F D++ A AA+
Sbjct: 289 RNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAM 346
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIEKVNGML-------LNGKKVYVG---RFIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEF---VMAESAIAA 385
+Y N + +T+ ++ FE G++ +++ D S FV F AE+A+ A
Sbjct: 193 NVYVKNFGEDLTEEQLRTMFEK-YGKITSYKIMSKDDGKSKGFGFVAFESPEAAETAVEA 251
Query: 386 LNCSGVVLGSLPIRV 400
LN ++ G P+ V
Sbjct: 252 LNGKEIIDGK-PLYV 265
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ P+R++ S+ R R+ ++ N+D+ + D K +
Sbjct: 72 MNFDLIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDRSI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESA 382
+ S G + ++ D + +++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAA 152
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 129 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 185
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 186 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 216
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 131 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 189
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 190 KESVRTSLALDESLFRGRQIKVIPKRT 216
>gi|427798071|gb|JAA64487.1| Putative splicing factor arginine/serine-rich, partial
[Rhipicephalus pulchellus]
Length = 381
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
E IRRTVYV ++D T EQL F G+V R+ G + RFAF+EFT++ A
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFFSQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGRA 130
Query: 288 LNLAG 292
L G
Sbjct: 131 LQFNG 135
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
E RT+Y N+D T + FF S GEV +R+ G TR AFVEF S
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFF-SQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGR 129
Query: 385 ALNCSGV 391
AL +G+
Sbjct: 130 ALQFNGI 136
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 164 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 220
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 221 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 251
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 166 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 224
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 225 KESVRTSLALDESLFRGRQIKVIPKRT 251
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+V + ++ + L F G++ D R+ D N R A++EF + E
Sbjct: 99 EERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVES 157
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVTQ 342
A+ AL L GT L P+++ S V+ T LPR + + + +Y ++ +T+
Sbjct: 158 AQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPMK-LYIGSLHYNITE 216
Query: 343 ADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIR 399
+K FE G++ ++L+ D + S FV +V ++ A AL+ +G L P++
Sbjct: 217 EMLKGIFEPF-GKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMK 275
Query: 400 V 400
V
Sbjct: 276 V 276
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 313 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTR 370
+P P D ART++ + ++ Q D++ FF SV G++ +RL+ D S
Sbjct: 93 SPELSPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIMDNKTKRSKG 146
Query: 371 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK--------TPVRPR 410
IA+VEF ESA AL +G L +PI++ S TP PR
Sbjct: 147 IAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPR 194
>gi|221061487|ref|XP_002262313.1| polyadenylate-binding protein [Plasmodium knowlesi strain H]
gi|193811463|emb|CAQ42191.1| polyadenylate-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 874
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+++ VTE L +F G V R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ A I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGAGNIFVKNLDKSI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
F+ S+ G + ++ D + S FV + ESA A+ +G+ LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYV 176
>gi|449433175|ref|XP_004134373.1| PREDICTED: uncharacterized protein LOC101203535 [Cucumis sativus]
Length = 936
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA+IE++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFSFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 288 LNLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 316
L L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 31/192 (16%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
RRT +VS++D + E+++ +F CG++ D R+ + +A++EF DE G AL
Sbjct: 771 RRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEFKDELGVLEALK 830
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK---------- 339
L T P+ P F+ + ED + A+ + T ++K
Sbjct: 831 LDRT-----PIE----------GRPMFVSKCEDRSQKKAQFKFSTAMEKNKLFIKNLPFT 875
Query: 340 -VTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV-MAESAIAALNCSGVVLGSL 396
A +++F E G V +R++ + + +A+VEF ++A A + G+ +G
Sbjct: 876 CSKDALIQIFSEH--GPVKEVRMVTYRSGAPKGLAYVEFEDEQDAAKAVMKTDGLKIGDH 933
Query: 397 PIRVSPSKTPVR 408
I V+ S P R
Sbjct: 934 EIEVAISNPPQR 945
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+++ VTE L +F G V R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ A I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGAGNIFVKNLDKSI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
F+ S+ G + ++ D + S FV + ESA A+ +G+ LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYV 176
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLAG 292
+YV++ E + LF G VVD R N+ RF +++ + A AL L
Sbjct: 668 LYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQLHK 727
Query: 293 TML-GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+L YP++V S P+ T PR+ E R +Y TNID KV + DV+ FF
Sbjct: 728 KLLEEKYPIQVFISD----PLRRT--PRSGAVYE--GRELYVTNIDFKVNEKDVETFFRD 779
Query: 352 VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
G+V +R+ ++ +V + A AL+ +G LG+ + V SK
Sbjct: 780 Y-GQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAAGKQLGNRVLNVVLSK 831
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
R +YV++ID +V E+ + F GQV RI N F ++ T + A AL+ A
Sbjct: 757 RELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAA 816
Query: 292 GTMLGFYPVRVLPS-------KTAIAPVNPTFLPRTEDERE-------------MCARTI 331
G LG + V+ S KT ++ + L ++ + E + ++++
Sbjct: 817 GKQLGNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNKMSTPKKSFEQIKSKSL 876
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV-MAESAIAALNCSG 390
TN+D V +A ++ FES G++YR+ L H A VEF+ + ++ A+L G
Sbjct: 877 GVTNVDGTVNEARLRSLFESY-GKLYRVVL----HPEHEGAVVEFLDIHDAGKASLALEG 931
Query: 391 VVLGSLPIRVS 401
+G + ++
Sbjct: 932 HEIGGRLLHIT 942
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGA 284
+ + ++YV D+D V + QL LF GQVV R+C D ++ L + ++ + E
Sbjct: 36 QFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEAT 95
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
RA L T L P+R++ S +PT R+ A I+ N+DK +
Sbjct: 96 RALDELNFTPLNGKPIRIMYSYR-----DPTI-------RKSGAGNIFIKNLDKSIDNKA 143
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ F S G + ++ D +R FV+F ESA +A++ +G++L + V P
Sbjct: 144 LHDTF-STFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGP 202
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D +++++L LF G + C++ DPN + R + F+ F T EE ++A +
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 384 GKMVVSKPLYV 394
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 34/222 (15%)
Query: 225 QREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFT 279
+RE +T VYV ++ + TE+ L +F G + + D + + F F+ F
Sbjct: 208 ERESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFD 267
Query: 280 D-EEGARAALNLAGTMLG---FYPVRVLPSKTAIAPVNPTF---LPRTEDEREMCARTIY 332
D ++ AR+ L G +Y + + F L T D+ E +Y
Sbjct: 268 DPDDAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFE--GLNLY 325
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSG 390
N+D ++ +K F S G + +++ D + +R FV F AE A AL +G
Sbjct: 326 VKNLDDSISDDKLKELF-SEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMNG 384
Query: 391 VVLGSLPIRV-----------------SPSKTPVRPRAPRLP 415
++ S P+ V S + PV PR P P
Sbjct: 385 KMVVSKPLYVALAQRKEERRARLQAQFSQMRPPVGPRMPMYP 426
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 219 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 249
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAG 292
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFFE 350
M L + + V F+PR + E+E + +Y N+ ++ T+ ++ FE
Sbjct: 168 GM--------LCNNQKVHVV--KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFE 217
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
G + +L+ D S R FV F +SA+AA + G LG
Sbjct: 218 PY-GRITSHKLMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLG 262
>gi|224060343|ref|XP_002300152.1| predicted protein [Populus trichocarpa]
gi|222847410|gb|EEE84957.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A++E+ +++T++VS++ +T EQL LF CG VV+C I +S A+IE++ E
Sbjct: 315 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECAIADSKHS----AYIEYSKPEE 370
Query: 284 ARAALNLAGTMLGFYPVRVLPSKT 307
A AAL L +G P+ V +K+
Sbjct: 371 ATAALALNNMDVGGRPLNVEMAKS 394
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 33/253 (13%)
Query: 184 NSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR-TVYVSDIDQQ 242
+S F ++ R A + K+ FGQ R+N + QRE+ ++V D+ +
Sbjct: 102 SSYGFVDYYDRRSAALAILTLNGKQIFGQ-LIRVNWAYASGQREDTTDHFNIFVGDLSPE 160
Query: 243 VTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-LAGTMLGFYP 299
VT+ L A F G D R+ D + + F+ F +++ A++A+N L G LG
Sbjct: 161 VTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQ 220
Query: 300 VRV-LPSKTAIAPVNPTFLPR---------TEDEREMC----------ARTIYCTNIDKK 339
+R +K A T + TED +E RT+Y N+ +
Sbjct: 221 IRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYVGNLAHE 280
Query: 340 VTQADV--KLFFESVCGEVYRLRLLGDYHHSTRIAFVEF-VMAESAIAALNCSGVVLGSL 396
VTQ DV +LF G + +R+ FV + E+A+A +G +LG
Sbjct: 281 VTQ-DVLHRLFHALGAGAIEEVRI----QLGKGFGFVRYSSHTEAALAIQMGNGRILGGK 335
Query: 397 PIRVSPSKTPVRP 409
PI+ S P P
Sbjct: 336 PIKCSWGNKPTPP 348
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 92 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 151
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 152 NMSWDPATQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 210
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 211 EITEESKHYNR-IYIASIHQDLTEEDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 269
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
+SA+ A+ + LG +RV + TP
Sbjct: 270 SMQSALEAIASMNLFDLGGQYLRVGRAITP 299
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARA 286
+ ++YV D+D VT+ QL LF GQVV R+C D + L + ++ +++ + A
Sbjct: 31 FVTTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAAR 90
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 91 ALDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDKAIDHKALH 139
Query: 347 LFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F E+A A+ +G++L + V P
Sbjct: 140 DTFSSF-GNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGP 196
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D + +E+L LF G + C++ DPN V R + F+ F T EE +RA L +
Sbjct: 318 LYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMN 377
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 378 GKMVASKPLYV 388
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 22/232 (9%)
Query: 186 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTE 245
+ F ++ + A V K K++++S+ L EE T++VS++ E
Sbjct: 127 VFFTEESSSKTKCSTGATVTEIKPHAMSKKKIDSK-KLEVNEE---NTIFVSNLASDTDE 182
Query: 246 EQLAALFVGCGQVVDCRIC---GDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV 302
+QL LF CGQV D R+ G +A++EFT E AL L T+L + V
Sbjct: 183 DQLHKLFSQCGQVADVRLIKKFGGKFGTNVYAYVEFTTSEPTVEALKLDHTVLNSRAIYV 242
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
+ N + ++ T++ TN+ +++ D++ F+ V +V +RL+
Sbjct: 243 -------SSCNADRQNKYNNK-----ATVFVTNVAHDLSERDLEDIFKEV-DQVKAVRLV 289
Query: 363 GDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSKTPVRPRAP 412
+ S A++E+ SA AA+ + + I+V+ SK P P
Sbjct: 290 RNKKGRSKGFAYIEYDTESSARAAVFQLNDREMAGKNIKVAISKPPASKELP 341
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 178 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKGEESV 237
Query: 285 RAALNLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
AAL L G L PV V P+ + + + +P +P +Y NI
Sbjct: 238 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVP---------FHRLYVGNI 288
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLG 394
+T+ D++ FE GE+ ++L D +R FV+F A A AL +G L
Sbjct: 289 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLA 347
Query: 395 SLPIRV 400
PIRV
Sbjct: 348 GRPIRV 353
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T DER+ RT++ + ++ ++K FFE V G V +++ D + S + +VEF
Sbjct: 176 TGDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVEFK 232
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +P+ V P++
Sbjct: 233 GEESVAAALQLTGQKLLGIPVIVQPTE 259
>gi|1279563|emb|CAA61298.1| nuM1 [Medicago sativa]
Length = 635
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V + F GC +VVD R+ D + V + F +EF E A++AL +
Sbjct: 376 KTLFVGNLSFDVKRSDIENFFQGCVEVVDVRLASDGDGVFKGFGHVEFATAEAAQSALEM 435
Query: 291 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 347
G L +R + + A P N + R +T++ DK + + +++
Sbjct: 436 NGQELLHRALRLDLARERGAFTPNNNSNYSAQSGGRGQS-QTVFVRGFDKNLGEDEIRAK 494
Query: 348 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL 386
F CGE R+ + DY +S A+++F ++S AL
Sbjct: 495 LMEHFGGTCGEPTRVSIPKDYESGYSKGFAYMDFKDSDSFSKAL 538
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 68 VLMKQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQSFLPFGPIKSI 127
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P +
Sbjct: 128 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQAVID 186
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
++E + R IY +I +T+ D+K FE+ +Y +L H F+E+
Sbjct: 187 EIQEEAKQYNR-IYVASIHPDLTEDDIKSVFEAFGPIIYCKLAQGSSGHKHKGYGFIEYE 245
Query: 378 MAES---AIAALNCSGVVLGSLPIRVSPSKTP 406
A++ AIA++N LG +RV + TP
Sbjct: 246 TAQAANEAIASMNLFD--LGGQYLRVGRAITP 275
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF---TDEE 282
E+ + +YV D+D +V+E +L +F G G +V R+C D S L +A++ F +D
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
A A LN T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLN--HTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINS 130
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
A ++ F G + ++ + S FV+F +SA AALN
Sbjct: 131 ASLQDIFCKF-GNILSCKVAEENGKSKCFGFVQFDSDDSATAALN 174
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R + R+ + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
++F ++ A AALN L TML ++ SK R E E +Y
Sbjct: 161 VQFDSDDSATAALNALNDTMLD--GKKLFVSKFVKK------CERKEASEETKFTNVYVK 212
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVM---AESAIAALNCSG 390
N+ + +T+ ++ F S G+V + ++ D + +R FV F A+ A+ ALN G
Sbjct: 213 NLGEDLTEDIIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN--G 269
Query: 391 VVLGSLPIRV 400
+LGS + V
Sbjct: 270 AMLGSKKLFV 279
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 202 AAVRRKKSF-GQGKRRMNSRTSLAQREEIIR--------RTVYVSDIDQQVTEEQLAALF 252
A + KK F G+ +++ + L +E++ +YV ++D V +++L F
Sbjct: 270 AMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHF 329
Query: 253 VGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTML 295
CGQ+ ++ + + + F F+ F T EE +A L GT+L
Sbjct: 330 SSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLL 374
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 36/207 (17%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR-----------------IC 264
S ++EE+ R+T+++ +I ++ L +F G + + R I
Sbjct: 257 SPEEQEEVDRKTIFIDNIPKETKITTLKKVFGQYGPIDNLRFRNIVPKNPKISKKVAAIK 316
Query: 265 GD--PNSVLRFAFIEFTDEEGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLPRTE 321
D P V A+I++ EE A+ AL++ G G Y VN + +
Sbjct: 317 QDIHPKIVTVVAYIKYKSEESAKKALSMNGKKFEGNY-------------VNVKIVAKLG 363
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMA 379
E+ ++I+ N+ + D+ F S CGE+ +RL+ D + +V F
Sbjct: 364 QEKHNIKKSIFIGNLKFGMNTNDIWENF-SKCGEIESVRLIRDKKTGQTRGFGYVNFKSE 422
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTP 406
++ AL GV + + P+RV + P
Sbjct: 423 DAVTLALKLDGVEINNRPVRVRTCRAP 449
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+V + ++ + L F G++ D R+ D N R A++EF + E
Sbjct: 99 EERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVES 157
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVTQ 342
A+ AL L GT L P+++ S V+ T LPR + + +Y ++ +T+
Sbjct: 158 AQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPMK-LYIGSLHYNITE 216
Query: 343 ADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIR 399
+K FE G++ ++L+ D + S FV +V ++ A AL+ +G L P++
Sbjct: 217 EMLKGIFEPF-GKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMK 275
Query: 400 V 400
V
Sbjct: 276 V 276
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
PS+T +P P D ART++ + ++ Q D++ FF SV G++ +RL+
Sbjct: 84 PSRTERRQKSPELSPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIM 137
Query: 364 D--YHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK--------TPVRPR 410
D S IA+VEF ESA AL +G L +PI++ S TP PR
Sbjct: 138 DNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPR 194
>gi|303280195|ref|XP_003059390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459226|gb|EEH56522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 589
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
+ RTVY +++ +TE+ LA F G V + G + RF F+EFTD+ A AA
Sbjct: 294 VARTVYAGNVNSSITEDMLADFFSVAGVVTYVKFAGSDFNPSRFGFVEFTDKASAEAAKA 353
Query: 290 LAGTMLGFYPVRV 302
L+GTML ++V
Sbjct: 354 LSGTMLAEMTLKV 366
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
ART+Y N++ +T+ + FF SV G V ++ G + +R FVEF SA AA
Sbjct: 294 VARTVYAGNVNSSITEDMLADFF-SVAGVVTYVKFAGSDFNPSRFGFVEFTDKASAEAAK 352
Query: 387 NCSGVVLGSLPIRVSPSKTPV 407
SG +L + ++V S P+
Sbjct: 353 ALSGTMLAEMTLKVKHSNNPI 373
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN-L 290
RT+YV ++D VTE+ + ALF GQ+ C+I +P S + F+EF + A +A+ +
Sbjct: 13 RTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSD-PYCFVEFVNHSDASSAITAM 71
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
M +RV + +AI P P T I+ ++ ++ +D++ F
Sbjct: 72 NARMCLGRELRVNWASSAIQQQTP-HRPDTSKHHH-----IFVGDLSPQIETSDLREAF- 124
Query: 351 SVCGEVYRLRLLGD--YHHSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
S GE+ R++ D S FV F AE+AI ++ G LGS IR
Sbjct: 125 SPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMD--GSWLGSRAIRT 177
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+EE L ALF G V +C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRP 409
+ P
Sbjct: 175 LPP 177
>gi|225466283|ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 285
+ + +++T+ VS++ +T EQL LF CG VV+C I + FA+IE++ E A
Sbjct: 337 KADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEAT 392
Query: 286 AALNLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 318
AAL L +G P+ V LP K AI +P+ LP
Sbjct: 393 AALALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI A+N + S+ S K P
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLP 176
Query: 407 VRPRAP 412
PR P
Sbjct: 177 -PPREP 181
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D + L +A++ + A AL
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALE- 93
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 94 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 140
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+ C G + ++ D ++ FV++ E+A AA+ +G+++ + V P
Sbjct: 141 TFCVFGNILSCKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 196
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D V +E+L LF G + C++ D N R + F+ F + E+ +RA +
Sbjct: 318 LYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMN 377
Query: 292 GTMLGFYPVRV 302
M+G P+ V
Sbjct: 378 NKMVGSKPLYV 388
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 195 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG 254
NG+ A AV + G G L + + ++YV D++ V++ QL LF
Sbjct: 12 NGSPGAVPAVVSPGAVGVG---------LGVAQPLPTTSLYVGDLEGSVSDSQLYELFSQ 62
Query: 255 CGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAALNLAGTMLGFYPVRVLPSKTAIAP 311
GQVV R+C D S L +A++ F + + ARA L L P+RV+ S
Sbjct: 63 AGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEVLNFAPLNNKPIRVMYSN----- 117
Query: 312 VNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY-HHSTR 370
R R + I+ N+DK + + F S G + ++ D S
Sbjct: 118 -------RDPSSRRSGSANIFIKNLDKMIDNKSLHETFSSF-GTILSCKVAMDEGGQSKG 169
Query: 371 IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
FV++ E+A A+ + +G+++ P+ V P
Sbjct: 170 FGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP 202
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + ++QL LF G++ C++ D N + + + F+ F T EE ++A +
Sbjct: 324 LYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMN 383
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
G M+ P+ V F R ED + M
Sbjct: 384 GKMISGKPLYV------------AFAQRKEDRKAML 407
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 246 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 276
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 249
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 250 KESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D S L +A++ + A AL
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 91
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 92 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 138
Query: 351 SVC--GEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+ C G + ++ D S FV++ E+A AA+ +G+++ + V P
Sbjct: 139 TFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 194
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 246 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 276
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 249
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 250 KESVRTSLALDESLFRGRQIKVIPKRT 276
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+R V+ I + E + F G+V D R+ D NS +IEF D A+
Sbjct: 225 QRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTF-----LPRTEDEREMCARTIYCTNIDKKVTQA 343
L+G L PV V PS+ V T L AR +Y N+ +T+A
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEA 344
Query: 344 DVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVV-LGSLPIRVS 401
D++ FE+ G+V ++L L + H FV+F E A A + +G + +G I+VS
Sbjct: 345 DIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVS 403
>gi|296088276|emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGAR 285
+ + +++T+ VS++ +T EQL LF CG VV+C I + FA+IE++ E A
Sbjct: 337 KADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEAT 392
Query: 286 AALNLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 318
AAL L +G P+ V LP K AI +P+ LP
Sbjct: 393 AALALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLRFAFIEFTDE-EGAR 285
T++V D+ VT+ L F V +VV R+ G + F+ F DE E R
Sbjct: 153 TIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKG---YGFVRFADEGEQMR 209
Query: 286 AALNLAGTMLGFYPVRVLPSK------TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 339
A + G + P+R+ P+ T A + + P + E + TI+ N+D
Sbjct: 210 AMTEMQGVLCSTRPMRIGPATNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPN 269
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALNCSGVVLGSL 396
VT ++ F S GE+ +++ R FV+F AE AI LN G +LG
Sbjct: 270 VTDDHLRQVF-SQYGELVHVKI----PSGKRCGFVQFSDRSSAEEAIRVLN--GTLLGGQ 322
Query: 397 PIRVSPSKTP 406
+R+S +TP
Sbjct: 323 NVRLSWGRTP 332
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ +L F G Q+V RI G V ++EF E
Sbjct: 179 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGV---GYVEFKSE 235
Query: 282 EGARAALNLAGTMLGFYPVRVLPS-----KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
+ + AL L G L PV V + + A P + + P + + +Y NI
Sbjct: 236 DAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGHPNS-----IPFHRLYVGNI 290
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLG 394
VT+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 291 HFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLA 349
Query: 395 SLPIRVSPSKTPVRPRAPRLPMH 417
PIRV P + MH
Sbjct: 350 GRPIRVGLGNDKFTPESTANLMH 372
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+YV I TE+ + + F CG + VDC + A I F E A+ AL L
Sbjct: 151 IYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 210
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
G +G +++ P K A F P E IY N+ +T+ +++ FF +
Sbjct: 211 GADMGGLFLKIQPYKATRANKASDFAP----EILEGYNRIYVGNLSWDITEEELRKFFNN 266
Query: 352 VCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
E+ LR D A V+F ++S AL VL P+R+S
Sbjct: 267 --SEITSLRFGMDKETGEFRGYAHVDFGDSQSLKKALALDQNVLFGRPVRIS 316
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 7/185 (3%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF 278
T + EE + TV+V ++ V EE LAA F CG V RI D + F ++ F
Sbjct: 172 TKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTF 231
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
+ AA+ L GT L +RV S T P + R E + T++ N+
Sbjct: 232 ESADALTAAMALTGTELDGREIRVDVS-TPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSF 290
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAAL-NCSGVVLGS 395
VT+ +++ F S G++ +R D +VE+ E+A A+ +GV +
Sbjct: 291 NVTEDEIRESF-SQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIAG 349
Query: 396 LPIRV 400
+R+
Sbjct: 350 RSLRL 354
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF---TDEE 282
E+ + +YV D+D +V+E +L +F G G +V R+C D S L +A++ F +D
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDAS 84
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
A A LN T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLN--HTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINS 130
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
A ++ F G + ++ + S FV+F +SA AALN
Sbjct: 131 ASLQDIFCKF-GNILSCKVAEENGKSKCFGFVQFDSDDSATAALN 174
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R + R+ + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
++F ++ A AALN L TM L K R E E +Y
Sbjct: 161 VQFDSDDSATAALNALNDTM--------LDGKKLFVSKFVKKCERKEASEETKFTNVYVK 212
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVM---AESAIAALNCSG 390
N+ + +T+ ++ F S G+V + ++ D + +R FV F A+ A+ ALN G
Sbjct: 213 NLGEDLTEDIIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN--G 269
Query: 391 VVLGSLPIRV 400
+LGS + V
Sbjct: 270 AMLGSKKLFV 279
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 202 AAVRRKKSF-GQGKRRMNSRTSLAQREEIIR--------RTVYVSDIDQQVTEEQLAALF 252
A + KK F G+ +++ + L +E++ +YV ++D V +++L F
Sbjct: 270 AMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHF 329
Query: 253 VGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTML 295
CGQ+ ++ + + + F F+ F T EE +A L GT+L
Sbjct: 330 SSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLL 374
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++ + + + + F G ++ CR+ D R +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A A+N ML +V K F+PR+E ER M +
Sbjct: 143 FVHFETEEAANEAINKVNGML-LNEKKVFVGK---------FVPRSERERMMGDKARLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAIAA 385
+Y N +++ +K FE V G++ R++ D +R FV F AE A+
Sbjct: 193 NVYVKNFGEELDDGKLKEMFE-VYGKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKE 251
Query: 386 LN 387
LN
Sbjct: 252 LN 253
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VTE L F G V+ R+C D S L +A++ F A AL+
Sbjct: 12 SLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALD- 70
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F P++ P + + +P+ R+ ++ N+ K + D K F+
Sbjct: 71 ---TMNFEPLKNRPMRIMWSQRDPSL-------RKSGVGNVFIKNLHKDI---DNKAIFD 117
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
S G + R+ D ++R FV F E+A A+N +G++L
Sbjct: 118 TFSAFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGMLL 164
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 228 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 284
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 285 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 315
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 230 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 288
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 289 KESVRTSLALDESLFRGRQIKVIPKRT 315
>gi|413916837|gb|AFW56769.1| hypothetical protein ZEAMMB73_720605 [Zea mays]
Length = 318
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 11/52 (21%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRL-----------LGDYHHSTR 370
TIY TNIDKKVT+AD+KLFFES+CGEV R L L +HH R
Sbjct: 255 TIYRTNIDKKVTEADLKLFFESICGEVGRSLLQTQSPFCIAKSLQKWHHQDR 306
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ ++++ S+ + QR++ + VYV I ++ E+ + A F+ G +
Sbjct: 70 VLMKQTLAHQQQQLASQRTQVQRQQALALMCRVYVGSISFELKEDTIRAAFLPFGPIKSI 129
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ EGA+ AL + G ++G ++V P+ +P
Sbjct: 130 NMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV---------GRPSNMP 180
Query: 319 RTE---DEREMCART---IYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRI 371
+ + DE + A++ IY +I +++ D+K FE+ +Y +L H
Sbjct: 181 QAQQVIDEIQEEAKSFNRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAPGTSLHTHKGY 240
Query: 372 AFVEFV---MAESAIAALNCSGVVLGSLPIRVSPSKTP 406
F+E+ + AIA++N LG +RV S TP
Sbjct: 241 GFIEYANKQAMDEAIASMNLFD--LGGQLLRVGRSITP 276
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ +L F G Q+V RI G V ++EF +E
Sbjct: 180 DERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKNE 236
Query: 282 EGARAALNLAGTMLGFYPVRVLPS-----KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
+ + AL L G L PV V + + A P P + + +Y NI
Sbjct: 237 DSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNS-----IPFHRLYVGNI 291
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLG 394
VT+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 292 HFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLA 350
Query: 395 SLPIRVSPSKTPVRPRAPRLPMH 417
PIRV P + MH
Sbjct: 351 GRPIRVGLGNDKFTPESTANLMH 373
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 221 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 277
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 278 EFSDKESVRTSLALDESLFRGRQIKVIPKRT 308
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 223 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 281
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 282 KESVRTSLALDESLFRGRQIKVIPKRT 308
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ ++L A F G VV+ +I D S ++EF DEE
Sbjct: 242 DERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEESV 301
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--------RTIYCTNI 336
+ A+ L G L P+ IA + R E A +Y NI
Sbjct: 302 QKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNI 353
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLG 394
+T+ D+K FE GE+ ++L + ++ FV+F+ A AL +G L
Sbjct: 354 HFSITEDDLKNVFEPF-GELEFVQLQKEEQGRSKGYGFVQFIDPAQAKEALEKMNGFELA 412
Query: 395 SLPIRV 400
PIRV
Sbjct: 413 GRPIRV 418
>gi|66800585|ref|XP_629218.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
gi|60462622|gb|EAL60825.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
Length = 691
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA-RAALNL 290
+ V+ +I+ + TEE++ LF G + +I PN + AFI F D A +A NL
Sbjct: 177 KIVWAGNINPESTEEEVRHLFSQFGYLQAIKII--PNK--QCAFITFADVNCAIQAQFNL 232
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTED-----EREMCARTIYCTNIDKKVTQADV 345
GT+ P+++ K AP R + + E + ++ N++ V+ +
Sbjct: 233 NGTIFRGLPLKLGFGKVENAPQANFGGGRFDQYNKPHQEETPTKNLWLGNVNSNVSYELL 292
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
K F+ G V +R+L H AFV F ESA AA N +G ++ +P++++
Sbjct: 293 KQIFDQF-GNVDTIRIL----HGRGCAFVNFFTVESAAAARNGLNGTMVCGMPLKIN 344
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 449 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 508
Query: 291 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 509 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 561
Query: 345 VKLFFESV------CGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
+ S+ CGE+ R+ + DY S +A+++F S A +G LG
Sbjct: 562 IHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGY 621
Query: 397 PIRV 400
+ V
Sbjct: 622 SLYV 625
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEF 278
T+ + E + ++YV D+D V+E L +F G V R+C D + L +A++ F
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNF 83
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
D + A+ A+ L F P++ + + +P+ R+ A I+ N+
Sbjct: 84 NDHDAAKTAIE----KLNFTPIKGKLCRIMWSQRDPSL-------RKKGAGNIFIKNLHP 132
Query: 339 KVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVLG 394
+ D K ++ SV G + ++ D ++ +V F ESA A++ +G++L
Sbjct: 133 DI---DNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLN 189
Query: 395 SLPIRVSP 402
I V P
Sbjct: 190 GQEIYVGP 197
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ I + E + F G+V D R+ D NS +IEF D A+
Sbjct: 225 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 289 NLAGTMLGFYPVRVLPSKT------AIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
L+G L PV V PS+ + VN P + AR +Y N+ +T+
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNAGSGPYS-----GGARRLYVGNLHFNITE 339
Query: 343 ADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVV-LGSLPIRV 400
++ FE G V ++L L + H FV+F E A ALN +G V + PI+V
Sbjct: 340 DQLRQVFEPF-GIVELVQLPLDETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKV 398
Query: 401 S 401
S
Sbjct: 399 S 399
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 27/206 (13%)
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
+A +R K FG + R+ T L T+YV++ E L LF CG++
Sbjct: 631 SALLRDGKYFGDRQIRVTPGTGL---------TLYVTNYPPTADENYLRKLFKECGEIFS 681
Query: 261 CRICG-DPNSVLRFAFIEFTDEEGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLP 318
R NS RF +I F + A AA L G L G Y + S P
Sbjct: 682 IRWPSLKVNSHRRFCYISFRTVDAAAAATKLDGQSLGGMYKLVAKHSD-----------P 730
Query: 319 RTEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFV 374
+R+ R I+ T+ID +T +++ F S G+V R+ LL ++ AFV
Sbjct: 731 PNRQKRQGALAEGREIHVTSIDPSITPDELEKLF-SKYGKVERVNLLTKVSGESKGAAFV 789
Query: 375 EFVMAESAIAALNCSGVVLGSLPIRV 400
F E A AAL+ L S + V
Sbjct: 790 SFATKEGAAAALDLDKTKLKSRVLNV 815
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 76/196 (38%), Gaps = 38/196 (19%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDCRICGDPNSVLRFAFIEFTDEEGARAA 287
R ++V+ ID +T ++L LF G+V + ++ G+ AF+ F +EGA AA
Sbjct: 744 REIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVSGESKGA---AFVSFATKEGAAAA 800
Query: 288 LNLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTE------DEREMCA------------ 328
L+L T L + V + T P TF R+ + M
Sbjct: 801 LDLDKTKLKSRVLNVEMAGATNFKPTATTFSKRSSASPGPAGDYAMSPSPAAAESLNTHA 860
Query: 329 ----------RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
RT+ NI V A V+ ES GE+ +L L D H I + +
Sbjct: 861 QHTSGGGISNRTLCLMNIPDTVNDARVRALAESY-GEILKLSLRLD-HQGAIIEYTDAAS 918
Query: 379 AESAIAALNCSGVVLG 394
A AL +V G
Sbjct: 919 VGKAALALENHEIVPG 934
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L +F G V R+C D L +A++ + + A AAL
Sbjct: 32 SLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSVQDAEAALE- 90
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + ++ P++ + +PT R+ A I+ N+D+ + D K F++
Sbjct: 91 ---SLNYIDIKGHPTRIMWSNKDPTL-------RKSGAGNIFVKNLDRSI---DTKAFYD 137
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+ G + ++ D + ++ FV + ESA A+ +G+V+G + VSP
Sbjct: 138 TFSHFGPILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSP 193
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 219 SRTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-F 273
+R + ++ +R++ ++V ++D+ + + F G ++ C++ D N V + +
Sbjct: 102 TRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHFGPILSCKVAMDENGVSKGY 161
Query: 274 AFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE-DEREMCART- 330
F+ + EE A+ A+ + G ++G V V P F+ + + D + T
Sbjct: 162 GFVHYDTEESAKEAIEKVNGMVIGGKKVEVSP-----------FIKKQDRDPASVDVFTN 210
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAALN 387
+Y N + +K F + GE+ + + D + AFV F MA+ A+ ALN
Sbjct: 211 LYVRNFPVSWDEEALKQFLDKY-GEITSMMIKED-GKGRKFAFVNFAEPEMAKEAVEALN 268
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRA 411
+ + GS P+ V P + + +A
Sbjct: 269 GTKLEEGSEPLLVCPHQDKAKRQA 292
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R+VYV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 91 SLEDKVEVDARSVYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 147
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
E+ D++ + +L L ++ ++VLP +T
Sbjct: 148 EYADKDSVQTSLALDESLFKGRQIKVLPKRT 178
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 303 LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL 362
+ S T + P++ ED+ E+ AR++Y N+D T +++ F CG V R+ +L
Sbjct: 81 MTSPTQMTPIS------LEDKVEVDARSVYVGNVDYSATAEELEAHFHG-CGSVNRVTIL 133
Query: 363 GDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
D H A++E+ +S +L + I+V P +T
Sbjct: 134 CDKFTGHPKGFAYIEYADKDSVQTSLALDESLFKGRQIKVLPKRT 178
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF EE
Sbjct: 204 DERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSEESV 263
Query: 285 RAALNLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
AAL L G L PV +V + A + N T +P +Y
Sbjct: 264 TAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVP---------FHRLYV 314
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGV 391
NI +T++D++ FE GE+ ++L D +R FV+F ++ A AL +G
Sbjct: 315 GNIHFSITESDLRNVFEPF-GELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKMNGF 373
Query: 392 VLGSLPIRV 400
L PIRV
Sbjct: 374 DLAGRPIRV 382
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVE 375
P TEDER+ RT++ + ++ ++K FFE G V +++ D + S + +VE
Sbjct: 200 PLTEDERDR--RTVFVQQLAARLRTRELKDFFEK-AGPVAEAQIVKDRVSNRSKGVGYVE 256
Query: 376 FVMAESAIAALNCSGVVLGSLPIRV 400
F ES AAL +G L +P+ V
Sbjct: 257 FRSEESVTAALQLTGQKLLGIPVIV 281
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T +++ ++D+Q+ + L FV G V+ C++ D + +
Sbjct: 117 RIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGYG 176
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE-----DEREMCAR 329
F+ + E A A+ ML + K + P +PR E DE +
Sbjct: 177 FVHYETAEAAETAIKAVNGML------LNDKKVYVGP----HIPRKERQSKLDEMKAQFT 226
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
+Y N+D +VTQ + + F + + D S FV + E A AA++
Sbjct: 227 NLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAVD 284
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE + +F G V R+C D + L +A++ + + +G RA
Sbjct: 46 SLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERALEQ 105
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L +++ P R++ S+ R R+ I+ N+D+++ D K
Sbjct: 106 LNYSLIKGRPCRIMWSQ------------RDPALRKTGQGNIFIKNLDEQI---DNKALH 150
Query: 350 ESVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRVSP 402
++ G V ++ D S FV + AE+A A+ +G++L + V P
Sbjct: 151 DTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGP 207
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 152 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 208
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 209 EFSDKESVRTSLALDESLFRGRQIKVVPKRT 239
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 154 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFTGHPKGFAYIEFSD 212
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 213 KESVRTSLALDESLFRGRQIKVVPKRT 239
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 470 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 529
Query: 291 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 530 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 582
Query: 345 VKLFFESV------CGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
+ S+ CGE+ R+ + DY S +A+++F S A +G LG
Sbjct: 583 IHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGY 642
Query: 397 PIRVSPSKTPVRPR 410
+ V + RPR
Sbjct: 643 SLYVDEA----RPR 652
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L LF G V C+I +P + +AF+EFT+ + A AL
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSASTALAAM 66
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + + + A +P N P+ + I+ ++ ++ ++ F
Sbjct: 67 NKRL--FLDKEMKVNWATSPGN---QPKQDTSNH---HHIFVGDLSPEIETETLREAFAP 118
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPS-KT 405
GE+ R++ D S AFV FV AE+AI A+N G LGS IR + S +
Sbjct: 119 F-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMN--GQWLGSRSIRTNWSTRK 175
Query: 406 PVRPR 410
P P+
Sbjct: 176 PPPPK 180
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 38 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 97
Query: 289 NLAGTMLGFYPVRVLPSKTA--IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L+G +L PV V PS+ + N + R +Y N+ +T+A+++
Sbjct: 98 ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLR 157
Query: 347 LFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG 390
FE EV +L L + H FV+F E A AA + +G
Sbjct: 158 EIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLNG 202
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + ++E
Sbjct: 30 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 86
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
F A S A+ SG +L P+ V PS+
Sbjct: 87 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 116
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 201 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 260
Query: 289 NLAGTMLGFYPVRVLPSK-----------TAIAPVNPTFLPRTEDEREMCARTIYCTNID 337
L+G +L PV V PS+ + A V P R +Y N+
Sbjct: 261 ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYG---------AVDRKLYVGNLH 311
Query: 338 KKVTQADVKLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG 390
+T+A+++ FE EV +L L + H FV+F E A AA + +G
Sbjct: 312 FNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLNG 365
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + ++E
Sbjct: 193 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 249
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
F A S A+ SG +L P+ V PS+
Sbjct: 250 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 279
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ +L F G Q+V RI G V ++EF DE
Sbjct: 165 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGV---GYVEFKDE 221
Query: 282 EGARAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIY 332
+ AL L G L PV V ++ T +P +P +Y
Sbjct: 222 DSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVP---------FHRLY 272
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSG 390
NI VT+ D++ FE GE+ ++L D +R FV+F A A AL +G
Sbjct: 273 VGNIHFNVTEEDLRAVFEPF-GELEFVQLQKDESDRSRGYGFVQFRDATQAREALEKMNG 331
Query: 391 VVLGSLPIRV 400
L PIRV
Sbjct: 332 FDLAGRPIRV 341
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 153 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 209
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R +L L ++ ++V+P +T
Sbjct: 210 EFSDKESVRTSLALDESLFRGRQIKVVPKRT 240
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D + H A++EF
Sbjct: 155 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHPKGFAYIEFSD 213
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 214 KESVRTSLALDESLFRGRQIKVVPKRT 240
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 194 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 250
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D+E R ++ L ++ ++V+P +T
Sbjct: 251 EFSDKESVRTSMALDESLFRGRQIKVIPKRT 281
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 308 AIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH- 366
+APV + E++ E AR+IY N+D T +++ F CG V R+ +L D
Sbjct: 187 GVAPV----IMSIEEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFS 241
Query: 367 -HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
H A++EF ES ++ + I+V P +T
Sbjct: 242 GHPKGFAYIEFSDKESVRTSMALDESLFRGRQIKVIPKRT 281
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 87/214 (40%), Gaps = 40/214 (18%)
Query: 213 GKRRMNSRTSLAQREEII------RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 266
G R NSR + E I +RT++V I Q+ L A F G VV+ +I D
Sbjct: 153 GDERRNSRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 212
Query: 267 --PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV-----------RVLPSKTAIAP-V 312
++EF DEE AL L G L P+ PS+ AP
Sbjct: 213 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPGA 272
Query: 313 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-- 370
N R +Y NI VT+ D++ FE GE+ ++ L D + R
Sbjct: 273 NGAPFHR-----------LYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSK 320
Query: 371 -IAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
FV+FV A++A+A +N G L IRV
Sbjct: 321 GYGFVQFVDPSHAKNALAEMN--GFELAGRQIRV 352
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAALN 289
++YV D++ V++ QL LF GQVV R+C D S L +A++ +++ + ARA
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L P+RV+ S R R + I+ N+DK + + F
Sbjct: 95 LNFAALNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 142
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEF---VMAESAIAALNCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ A++AI +LN G+++ P+ V P
Sbjct: 143 SSF-GTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLN--GMLINDKPVFVGP 196
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAG 292
+Y+ ++++ + + + F G +++C + D R + F+ F EE ARAA+
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFFE 350
M L + + V F+PR + E+E + +Y N+ ++ T+ ++ FE
Sbjct: 169 GM--------LCNNQKVHVV--KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFE 218
Query: 351 SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
+L + S R FV F +SA+AA + G LG
Sbjct: 219 PYGRITSHKLMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLG 263
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
++ + RT+YV ++D+QVTE + LF G C++ + + F+EF + A A
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL TM G R++ K VN P + + ++ ++ +V D+K
Sbjct: 69 ALQ---TMNG----RMILGKE--VKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLK 119
Query: 347 LFFESVCGEVYRLRLLGDYH--HSTRIAFVEF---VMAESAIAALNCSGVVLGSLPIRVS 401
F G++ R++ D S FV F V AE+AI +N G L IR +
Sbjct: 120 AAFAPF-GQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMN--GQWLSGRAIRTN 176
Query: 402 -PSKTPVRPRAPR 413
++ P PR P
Sbjct: 177 WATRKPPPPRQPE 189
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 110 VLMKQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 169
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ +L + G MLG ++V+ + + P +
Sbjct: 170 NMSWDPVTQKHKGFAFVEYEIPEAAQLSLEQMNGVMLGGRNIKVV-GRPSNMPQAQAVID 228
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
++E + R IY +I ++T+ D+K FE+ Y +L H F+E+
Sbjct: 229 EIQEEAKQYNR-IYVASIHPELTEDDIKNVFEAFGPITYCKLAYGASAHKHKGYGFIEYA 287
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
+A+ A+ + LG +RV + TP
Sbjct: 288 TLPAALEAIASMNLFDLGGQYLRVGRAITP 317
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
++A+ A+ + LG +RV + TP
Sbjct: 268 TMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 40/254 (15%)
Query: 174 NGFNGGF----FANNSLIFNNHNARNGNV--NANAAVRRKKS-FGQGKRRMNSRTSLAQR 226
NG++ G+ F N++ N NG ++ A R + G G+RR +
Sbjct: 117 NGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERR---------Q 167
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLRFAFIEFTD 280
E TV+V D+ VT+ L F V +VV+ R G + F+ F D
Sbjct: 168 AEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKG---YGFVRFAD 224
Query: 281 E-EGARAALNLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRTEDEREMCARTIYCTN 335
E E RA + G P+R P+ + P + E + TI+
Sbjct: 225 ESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGA 284
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALNCSGVV 392
+D+ VT+ D+K F GE+ +++ R FV++ AE A++ LN G
Sbjct: 285 VDQSVTEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRACAEQALSVLN--GTQ 337
Query: 393 LGSLPIRVSPSKTP 406
LG IR+S ++P
Sbjct: 338 LGGQSIRLSWGRSP 351
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
++A+ A+ + LG +RV + TP
Sbjct: 268 TMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF---TDEE 282
E+ + +YV D+D +V+E +L +F G G +V R+C D S L +A++ F +D
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
A A LN T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLN--HTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINS 130
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
A ++ F G + ++ + S FV+F +SA AALN
Sbjct: 131 ASLQDIFCKF-GNILSCKVAEENGKSKCFGFVQFDSDDSATAALN 174
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R + R+ + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
++F ++ A AALN L TML ++ SK R E E +Y
Sbjct: 161 VQFDSDDSATAALNALNDTMLD--GKKLFVSKFVKK------CERKEASEETKFTNVYVK 212
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVM---AESAIAALNCSG 390
N+ + +T+ ++ F S G+V + ++ D + +R FV F A+ A+ ALN G
Sbjct: 213 NLGEDLTEDIIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN--G 269
Query: 391 VVLGSLPIRV 400
+LGS + V
Sbjct: 270 AMLGSKKLFV 279
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 202 AAVRRKKSF-GQGKRRMNSRTSLAQREEIIR--------RTVYVSDIDQQVTEEQLAALF 252
A + KK F G+ +++ + L +E++ +YV ++D V +++L F
Sbjct: 270 AMLGSKKLFVGRAQKKAERQELLKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHF 329
Query: 253 VGCGQVVDCRICGDPNSVLR-FAFIEF-TDEEGARAALNLAGTML 295
CGQ+ ++ + + + F F+ F T EE +A L GT+L
Sbjct: 330 SSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLNGTLL 374
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
+ ++YV D++ VT+ L LF GQVV R+C D + L + ++ ++ + A A
Sbjct: 22 VTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARA 81
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+ ML F P+ P + + +P+ R+ + I+ N+DK + +
Sbjct: 82 LD----MLNFTPLNGSPIRIMYSHRDPSV-------RKSGSGNIFIKNLDKGIDHKALHD 130
Query: 348 FFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F S G + ++ D S FV+F ESA A+ +G++L + V P
Sbjct: 131 TF-SAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 186
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F T EE ++A + +
Sbjct: 308 LYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMN 367
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 368 GKMVVSKPLYV 378
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 279
+R + R+VYV ++D T ++L F GCG V + C R G P FA+IEF+
Sbjct: 72 ERMDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFS 128
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
D A++A+ L TM ++VLP +T + ++ T
Sbjct: 129 DRSAAQSAVGLHETMFRGRVLKVLPKRTNMPGISTT 164
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
++A+ A+ + LG +RV + TP
Sbjct: 268 TMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 26/194 (13%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 446 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 505
Query: 291 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 506 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 558
Query: 345 VKLFFESV------CGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSL 396
+ S+ CGE+ R+ + DY S +A+++F S A +G LG
Sbjct: 559 IHQIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGY 618
Query: 397 PIRVSPSKTPVRPR 410
+ V + RPR
Sbjct: 619 SLYVDEA----RPR 628
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 90 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 149
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 150 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 208
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 209 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 267
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
++A+ A+ + LG +RV + TP
Sbjct: 268 TMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
++V D+ ++ L F G++ DCR+ DP ++ + F+ F +D E A A +
Sbjct: 88 IFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGM 147
Query: 289 NLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDE----REMCARTIYCTNIDKKVTQA 343
N G LG +R ++ AP + P + +E T+YC N+ + T+
Sbjct: 148 N--GQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGNLAQGSTEE 205
Query: 344 DVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
++ F G++ +R+ D + AF+ F ESA A+ + L ++ S
Sbjct: 206 ALQKIFGPY-GQIQEIRVFKDKGY----AFIRFASKESATQAIVSVHNTDLNGQNVKCSW 260
Query: 403 SKTPVRP 409
K P P
Sbjct: 261 GKEPGEP 267
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 25/187 (13%)
Query: 235 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG---ARAALNLA 291
YV ++D VTEE + LF G V C+I +P + F+EF + A AA+N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHE-PYCFVEFAEHHSAAAALAAMNKR 59
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
M R + A +P N P+ + + I+ ++ ++ ++ F +
Sbjct: 60 NCM-----GREMKVNWATSPGN---APKQDTSKHF---HIFVGDLSPEIETHTLRDAFAA 108
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D S FV FV AE+AIA +N G LG+ IR + +
Sbjct: 109 F-GEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMN--GQWLGTRAIRTNWATR- 164
Query: 407 VRPRAPR 413
+P AP+
Sbjct: 165 -KPPAPK 170
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 16/166 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAG 292
+Y+ ++++ + + + F G +++C + D R + F+ F EE ARAA+
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFFE 350
M L + + V F+PR + E+E + +Y N+ ++ T+ ++ FE
Sbjct: 172 GM--------LCNNQKVHVV--KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFE 221
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
G + +L+ D S R FV F +SA+AA + G LG
Sbjct: 222 PY-GRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLG 266
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 13/182 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGA 284
EE RTV+ + Q+V L F G+V D R+ C A+IEF D E
Sbjct: 262 EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESV 321
Query: 285 RAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
AL L+G L P+ V + K + P F P++ + +Y ++ +T
Sbjct: 322 ALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKS----HVGPMRLYVGSLHFDIT 377
Query: 342 QADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPI 398
+ ++ FE G++ ++L+ D + S F+ + AE A AL +G L P+
Sbjct: 378 EEMLRGIFEPF-GKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNGFELAGRPM 436
Query: 399 RV 400
+V
Sbjct: 437 KV 438
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 191
Query: 275 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 192 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKANF 240
Query: 330 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y NI + T+ D + FE G+V L D +R FV F ESA A++
Sbjct: 241 TNVYVKNISPEATEDDFRQLFEQY-GDVTSSSLARDQEGKSRGFGFVNFTTHESAAKAVD 299
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 162 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 218
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D++ R ++ L ++ ++V+P +T
Sbjct: 219 EFSDKDSVRTSMALDDSLFRGRQIKVIPKRT 249
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
+S ++ + I+V P +T
Sbjct: 223 KDSVRTSMALDDSLFRGRQIKVIPKRT 249
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRV--FLDKEIKVNWATSPGN---TPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D H S AFV FV AE+AI ++N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMN--GQWIGSRNIRTNWSTRK 174
Query: 407 VRP 409
+ P
Sbjct: 175 LPP 177
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV ++D VTE L +F G V R+C D + L +A++ F ++ AL
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALE- 105
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + P++ P + + +P R+ A IY N+D + + F
Sbjct: 106 ---ELNYSPIKERPCRIMWSQRDPAL-------RKTGAGNIYIKNLDPAIDNKALHDTF- 154
Query: 351 SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G++ ++ D + +S FV + AESA +A+ + +G++L + V P
Sbjct: 155 SAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGP 208
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 24/179 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 190
Query: 275 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 191 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKANF 239
Query: 330 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y NI VT D + FE G+V L D TR FV F E+A A+
Sbjct: 240 TNVYVKNIAPDVTDEDFRQLFEKF-GDVTSSSLARDQEGKTRGFGFVNFTTHEAAFKAV 297
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 289
++YV ++D VTE L LF G V R+C D + L +A++ + + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 120 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 167
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
+ G + ++ D + +++ FV + E+A A+ + +G++L + V
Sbjct: 168 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYV 219
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL ++ E+ R++YV ++D T E+L F GCG + I G P FA+I
Sbjct: 88 SLEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D + + A+ + ++ P++V+P +T
Sbjct: 145 EFGDRDSVQTAMAMDESLFRGRPIKVMPKRT 175
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E+ R+IY N+D T +++ F CG + R+ +L + + H A++EF
Sbjct: 90 EEKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSINRVTILCNKYDGHPKGFAYIEFGD 148
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
+S A+ + PI+V P +T
Sbjct: 149 RDSVQTAMAMDESLFRGRPIKVMPKRT 175
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAAL 288
+RT++V I Q+ L A F G VV+ +I D ++EF DEE AL
Sbjct: 174 KRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEFKDEESVPQAL 233
Query: 289 NLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L G L P+ L P+ +Y NI VT+ D++
Sbjct: 234 ELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEKDLQE 293
Query: 348 FFESVCGEVYRLRLLGDYHHSTR---IAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
FE GE+ ++ L D + R FV+FV A++A+A +N G L IRV
Sbjct: 294 IFEPF-GELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMN--GFELAGRQIRV 349
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEE 282
+Q + +T++V ++ + EQ+ F G+VVD R+ D S + +EF E
Sbjct: 405 SQSQATGSKTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAE 464
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE----REMCAR---TIYCTN 335
A+ AL G L +R+ +A + P + + R+ R T++
Sbjct: 465 AAQKALEFGGRDLMGRSLRI-----DLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKG 519
Query: 336 IDKKVTQADVKLFFES---VCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSG 390
D V + ++ E CG++ R+ + DY S +A+++F +S A +G
Sbjct: 520 FDTSVGEDQIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDFKDPDSLNKAYEMNG 579
Query: 391 VVLGSLPIRVSPSK 404
LG + V +K
Sbjct: 580 TYLGDYSLYVDEAK 593
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ + VTE L +F G V+ R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
F+ S+ G + ++ D + S FV + ESA A+ +G+ LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|303284403|ref|XP_003061492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456822|gb|EEH54122.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 525
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
+++T++V ++ VT EQL +F CG V DCRI + F F+E+ E A A L
Sbjct: 177 LQKTLHVGNLAPGVTVEQLRTIFAFCGVVTDCRIANEKA----FGFVEYATHEQALAGLG 232
Query: 290 LAGTMLGFYPVRVLPSKT 307
L G L P+RV SKT
Sbjct: 233 LNGLALEDRPLRVEMSKT 250
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
+T++ N+ VT ++ F + CG V R+ + FVE+ E A+A L
Sbjct: 179 KTLHVGNLAPGVTVEQLRTIF-AFCGVVTDCRIA----NEKAFGFVEYATHEQALAGLGL 233
Query: 389 SGVVLGSLPIRVSPSKT 405
+G+ L P+RV SKT
Sbjct: 234 NGLALEDRPLRVEMSKT 250
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A++ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAID----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
E +RRT +VS+ +T EQ+ LF CG +V+CR + S FAFIEF + A AA
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLFSFCGTIVECR---EGPSGKNFAFIEFESNKEALAA 337
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
L L G +G +RV +KT P +PR
Sbjct: 338 LALNGMNVGGRNIRVELAKT------PRLMPR 363
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
RT + +N +T VK F S CG + R + AF+EF + A+AAL
Sbjct: 285 RTAHVSNYPSALTVEQVKQLF-SFCGTIVECR---EGPSGKNFAFIEFESNKEALAALAL 340
Query: 389 SGVVLGSLPIRVSPSKTP-VRPRA 411
+G+ +G IRV +KTP + PRA
Sbjct: 341 NGMNVGGRNIRVELAKTPRLMPRA 364
>gi|320580160|gb|EFW94383.1| Splicing factor [Ogataea parapolymorpha DL-1]
Length = 295
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 232 RTVYVSDID-QQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-----FAFIEFTDEEGAR 285
R VYVSD+D +V E++L+ +F G + RI + + FAFI F A
Sbjct: 116 RQVYVSDLDFYKVDEDKLSEIFSKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAV 175
Query: 286 AALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
+L L G +L P+++ P K ++ + R ARTI N+D K+
Sbjct: 176 KSLELDGKLLAGRPMKIELATPKKKKVSVLGTGKFDR--------ARTISVLNVDDKINT 227
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF-VMAESAIAALNCSGVVLGSLPIRV 400
+K FE + G V ++ L A +EF + S +A +G +G +R+
Sbjct: 228 ETLKAIFEEI-GPVTQIEL----QPENNAALIEFETVRSSGMADFKFNGRKIGDTTVRI 281
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF +E+
Sbjct: 178 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDSV 237
Query: 285 RAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+AAL L G L PV V ++ T + +P +P +Y N
Sbjct: 238 QAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVGN 288
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
I +T+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 289 IHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 347
Query: 394 GSLPIRV 400
PIRV
Sbjct: 348 AGRPIRV 354
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF +E+
Sbjct: 178 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDSV 237
Query: 285 RAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+AAL L G L PV V ++ T + +P +P +Y N
Sbjct: 238 QAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVGN 288
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
I +T+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 289 IHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 347
Query: 394 GSLPIRV 400
PIRV
Sbjct: 348 AGRPIRV 354
>gi|449691485|ref|XP_002170081.2| PREDICTED: uncharacterized protein LOC100212876, partial [Hydra
magnipapillata]
Length = 312
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-GDPNSVLRFAFIEFTDEEGARAAL 288
IRRTV+V +I +T +QL A F G G+V R+C GD ++AF+EFT + AL
Sbjct: 23 IRRTVFVQNIPPDITADQLMAFFSGVGEVKYLRLCKGDSG---KYAFVEFTAIDSVPTAL 79
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE 321
G + G ++V SK +P P +E
Sbjct: 80 QYNGVLFGGRCLKVDYSK------HPIIKPESE 106
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL-GDYHHSTRIAFVEFVMAESAIAALN 387
RT++ NI +T + FF V GEV LRL GD S + AFVEF +S AL
Sbjct: 25 RTVFVQNIPPDITADQLMAFFSGV-GEVKYLRLCKGD---SGKYAFVEFTAIDSVPTALQ 80
Query: 388 CSGVVLGSLPIRVSPSKTP-VRPRAPRLPM 416
+GV+ G ++V SK P ++P + ++ +
Sbjct: 81 YNGVLFGGRCLKVDYSKHPIIKPESEQIAI 110
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 26/197 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R QR+ R+T ++V ++D ++ L ++F G ++ C++ G+ F F
Sbjct: 89 RIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVAGENGRSKGFGF 148
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRTEDEREMCAR 329
++F ++ A A L TMLG + V +TA AP
Sbjct: 149 VQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCE-------------VFT 195
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNC 388
+Y N+D+ +T+ +K F SV G+V + ++ D+ S FV F + A A++
Sbjct: 196 NLYVKNLDETITEDGLKDMF-SVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDV 254
Query: 389 -SGVVLGSLPIRVSPSK 404
+G V+GS + V ++
Sbjct: 255 MNGSVIGSKTLFVGKAQ 271
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 226 REEIIRR--TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDE 281
++++++R ++YV D+D +VTE L A F G + R+C L +A++
Sbjct: 9 KQQVLQRGASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSH 68
Query: 282 EGARAALNLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
A AL L T L P+R++ + R R+ ++ N+D +
Sbjct: 69 AQASRALGLLNHTNLKGKPMRIM------------WCQRDPFARKTGFANLFVKNLDFSI 116
Query: 341 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAA 385
+ + ++ F S G + ++ G+ S FV+F +SA+ A
Sbjct: 117 SSSCLESIF-SKYGTILSCKVAGENGRSKGFGFVQFESQDSALVA 160
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF +E+
Sbjct: 178 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDSV 237
Query: 285 RAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+AAL L G L PV V ++ T + +P +P +Y N
Sbjct: 238 QAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVGN 288
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
I +T+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 289 IHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 347
Query: 394 GSLPIRV 400
PIRV
Sbjct: 348 AGRPIRV 354
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D N ++EF +E+
Sbjct: 177 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDSV 236
Query: 285 RAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+AAL L G L PV V ++ T + +P +P +Y N
Sbjct: 237 QAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIP---------FHRLYVGN 287
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
I +T+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 288 IHFSITEQDLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 346
Query: 394 GSLPIRV 400
PIRV
Sbjct: 347 AGRPIRV 353
>gi|356525215|ref|XP_003531222.1| PREDICTED: uncharacterized protein LOC100790138 [Glycine max]
Length = 975
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A +++ +++T+ VS++ +T EQL LF CG VV+C I FA+IE++ E
Sbjct: 337 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECTIT----DSKHFAYIEYSKPEE 392
Query: 284 ARAALNLAGTMLGFYPVRV 302
A AAL L +G P+ V
Sbjct: 393 ATAALALNNIDVGGRPLNV 411
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 201 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 260
Query: 289 NLAGTMLGFYPVRVLPSKTA--IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L+G +L PV V PS+ + N + R +Y N+ +T+A+++
Sbjct: 261 ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLR 320
Query: 347 LFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVV-LGSLPIRVS 401
FE EV +L L + H FV+F E A AA + +G + + I+VS
Sbjct: 321 EIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVS 377
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + ++E
Sbjct: 193 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 249
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSK 404
F A S A+ SG +L P+ V PS+
Sbjct: 250 FYDAMSVPMAIALSGQLLLGQPVMVKPSE 278
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 289
RT++V+ + ++ E L F G+VVD RI D + A++EF +E AA+
Sbjct: 154 RTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQ 213
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+G +L +PV V+ + A + E ++ A+ + N+ + + D++ F
Sbjct: 214 KSGQLLCGFPV-VVQASQAEKNQAARLAAQVAGELDLPAK-LQVDNLHMDIAEDDLQTLF 271
Query: 350 ESVCGEVYRLRLLGDYHHSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
S G+V +R+ ++ ST VEF A+ A+A LN + +L +R+
Sbjct: 272 -SPFGKVLSVRINKEHGRSTGKGVVEFKTLQDAQKAVAHLNGFDLAGKALNVRI 324
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 323 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAE 380
+R+M RTI+ + +K + D+ FF S G+V +R++ D S IA+VEF E
Sbjct: 150 DRDM--RTIFVAQVARKADERDLFQFF-SEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQE 206
Query: 381 SAIAALNCSGVVLGSLPIRVSPSKT 405
+AA+ SG +L P+ V S+
Sbjct: 207 QCVAAVQKSGQLLCGFPVVVQASQA 231
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 349
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 164 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 212
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
E G + +L+ D S R FV F +SA+AA + G LG
Sbjct: 213 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLG 258
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E +RTV+V + ++ ++L A F G Q+V R+ G V ++EF +E
Sbjct: 173 DERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKNE 229
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
E AA+ L G L P+ ++ T P + + ++ +Y NI +T
Sbjct: 230 ESVAAAIQLTGQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQIPFHRLYVGNIHFSIT 289
Query: 342 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIR 399
+ D++ FE GE+ ++L + +R FV+F A AL +G L PIR
Sbjct: 290 EGDLQNVFEPF-GELEFVQLQKEDQGRSRGYGFVQFRDPHQAREALEKMNGFDLAGRPIR 348
Query: 400 V 400
V
Sbjct: 349 V 349
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ QV + F G G+VVD R D + + F +EF E A AL L
Sbjct: 387 KTLFVGNLPFQVERADVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHEALKL 446
Query: 291 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCART--IYCTNIDKKVTQADVK 346
G L VR + + AP P ++ ++T I+ DK + + +++
Sbjct: 447 NGQSLNGREVRLDLARERGERAPYTPYSGKDNSFQKGGRSQTQKIFVRGFDKFLGEDEIR 506
Query: 347 ----LFFESVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
F++ CGE+ R+ L DY +A+VEF A AL +G LG + V
Sbjct: 507 NSLGEHFKT-CGEITRISLPTDYETGAIKGMAYVEFQDATGFNKALEFNGSQLGDQYLTV 565
Query: 401 SPSKTP 406
+K P
Sbjct: 566 EEAKPP 571
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL +F G VV R+C D S L +A++ + A AL
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 184
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F P+ P + + +P+ R+ I+ N+DK + D K +
Sbjct: 185 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALHD 231
Query: 351 SVC--GEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+ C G + ++ D S FV++ E+A AA+ +G+++ + V P
Sbjct: 232 TFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 287
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL ++ E+ R++YV ++D T E+L F GCG + I G P FA+I
Sbjct: 88 SLEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D + + A+ + ++ P++V+P +T
Sbjct: 145 EFGDRDSVQTAMAMDESLFRGRPIKVMPKRT 175
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E+ R+IY N+D T +++ F CG + R+ +L + + H A++EF
Sbjct: 90 EEKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSINRVTILCNKYDGHPKGFAYIEFGD 148
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
+S A+ + PI+V P +T
Sbjct: 149 RDSVQTAMAMDESLFRGRPIKVMPKRT 175
>gi|356510930|ref|XP_003524186.1| PREDICTED: uncharacterized protein LOC100796921 [Glycine max]
Length = 969
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A +++ +++T+ VS++ +T EQL LF CG VV+C I FA+IE++ E
Sbjct: 331 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECAIT----DSKHFAYIEYSKPEE 386
Query: 284 ARAALNLAGTMLGFYPVRVLPSKT 307
A AAL L +G P+ V +K+
Sbjct: 387 ATAALALNNIDVGGRPLNVEMAKS 410
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 60 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 119
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 120 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 178
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 179 EITEESKHYNR-IYIASIHQDLTEEDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 237
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
++A+ A+ + LG +RV + TP
Sbjct: 238 TMQAALEAIASMNLFDLGGQYLRVGRAITP 267
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 290
T+YV IDQ+VT+E L LF CG VV+ + D + + F+EF EE A ++ +
Sbjct: 13 TIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADYSIKI 72
Query: 291 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKL 347
++ Y P++V + ++D+R + I+ N+D+ +T+ +
Sbjct: 73 M-HLVKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDQSITEQQLHD 117
Query: 348 FFESVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRV 400
F S G + R++ D S AFV + E+A AA+N +G GS I V
Sbjct: 118 TF-SQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAINTMNGQFFGSKKINV 172
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 213 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--V 270
GK ++ S +R + + +++ ++DQ +TE+QL F G ++ RI DP++
Sbjct: 80 GKPIKVNKASQDKRTQEVGANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDES 139
Query: 271 LRFAFIEFTDEEGARAALN-LAGTMLG 296
+AF+ + + E A AA+N + G G
Sbjct: 140 KGYAFVSYDNFEAADAAINTMNGQFFG 166
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 10/172 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
YV I TE+ + + F CG + VDC + A I F E A+ AL L
Sbjct: 168 AYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 227
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
G +G +++ P K A F P + IY N+ +T+ +++ FF
Sbjct: 228 GADMGGLFLKIQPYKATRANKASDFAPEILEGYNR----IYVGNLSWDITEEELRKFFNG 283
Query: 352 VCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
E+ LR D A V+F ++S AL VL P+R+S
Sbjct: 284 C--EITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRPVRIS 333
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 17/176 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGT 293
++++ + TE+++ F GCG+V RI AF+ F E A AAL + G
Sbjct: 251 IFIAGLPWSATEDEVKEHFAGCGEVTGARIPLQNGRSSGTAFVTFATSEAAEAALAMDGQ 310
Query: 294 MLG--FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
G + +R K DE+ +++ N+ V + V+ F
Sbjct: 311 DFGGRWMKIRTAEKKNMF------------DEKPEGCTSVFIGNLSWDVDENTVRETF-G 357
Query: 352 VCGEVYRLRLLGDYHHSTRIAF--VEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
CGE+ RL D F V+F E+ A+ +G + IRV+ +K+
Sbjct: 358 ECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVKLAGSYVNGRAIRVNYAKS 413
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 349
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
E G + +L+ D S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ + VTE L +F G V+ R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
F+ S+ G + ++ D + S FV + ESA A+ +G+ LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 290
++V D+ V +QL F G++ DCR+ DP + + F+ F ++ A A+N +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 291 AGTMLGFYPVRV-----LPSKTA-------IAPVNPTFLPRTEDEREMCAR----TIYCT 334
G LG +R P+ A P + P T DE A T+YC
Sbjct: 110 NGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVYCG 169
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
+ + +++ ++ F S G + +R+ D + AFV F ESA A+
Sbjct: 170 GLGQGLSEELIQKTFSSY-GIIQEIRVFKDKGY----AFVRFATKESATHAI 216
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T++V +I VT+E LA F G+VV RI N FA +EF+ E A+ ALN +
Sbjct: 345 KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKS 404
Query: 292 GTMLG---FYPVRVLPSKT-AIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK- 346
G +G Y P T A P P R+ T++ DK + ++
Sbjct: 405 GQDMGGRRIYCDLANPRGTPASGPKRDRPSPGFNGNRKTSGNTVFVKGFDKYQEEDSIRE 464
Query: 347 ---LFFESVCGEVYRLRLLGDYHHS--TRIAFVEF 376
F+S CG + R+++ D A++EF
Sbjct: 465 SLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEF 498
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
E + + V+ I Q TEE LA +F G+V +I D N+ F F+++ +EE A
Sbjct: 23 ECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAA 82
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A+ + M Y + L + P +M A +Y TN+ K VT+ DV
Sbjct: 83 KAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTEDDV 129
Query: 346 KLFFESVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAAL-NCSGVVL--GSLPIRV 400
F S GE+ + +L D +AFV F E A AA+ + G +L LP+ V
Sbjct: 130 HRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAMLPLSV 188
Query: 401 SPSKTPVRPRAPRL 414
++ R +A L
Sbjct: 189 RVAEDHGRQKAQYL 202
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ + VTE L +F G V+ R+C D SV R +A++ + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + ++ P++ + +P+ R+ I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 349 FE--SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
F+ S+ G + ++ D + S FV + ESA A+ +G+ LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
VYV I TEE + + F GCG + VDC D A I F E A+ AL L
Sbjct: 183 VYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRALALD 242
Query: 292 GTMLGFYPVRVLPSKTA---IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
G+ +G + +++ P KT A F P+ + IY N+ +T+ D++ F
Sbjct: 243 GSDMGGFFLKIQPYKTTRTFQAKKVSDFAPKIVEGY----NRIYVGNLSWDITEEDLRKF 298
Query: 349 F 349
F
Sbjct: 299 F 299
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 40/254 (15%)
Query: 174 NGFNGGF----FANNSLIFNNHNARNGNV--NANAAVRRKKS-FGQGKRRMNSRTSLAQR 226
NG++ G+ F N++ N NG ++ A R + G G+RR +
Sbjct: 117 NGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERR---------Q 167
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLRFAFIEFTD 280
E TV+V D+ VT+ L F V +VV+ R G + F+ F D
Sbjct: 168 AEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKG---YGFVRFAD 224
Query: 281 E-EGARAALNLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRTEDEREMCARTIYCTN 335
E E RA + G P+R P+ + P + E + TI+
Sbjct: 225 ESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGA 284
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALNCSGVV 392
+D+ VT+ D+K F GE+ +++ R FV++ AE A++ LN G
Sbjct: 285 VDQSVTEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRACAEQALSVLN--GTQ 337
Query: 393 LGSLPIRVSPSKTP 406
LG IR+S ++P
Sbjct: 338 LGGQSIRLSWGRSP 351
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 26/195 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIEKVNGML-------LNGKKVYVG---RFIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEF---VMAESAIAA 385
+Y N + +++ ++ FE G++ +++ D S FV F AE+A+ A
Sbjct: 193 NVYVKNFGEDLSEEQLRNMFEKF-GKITSYKVMSKDDGKSKGFGFVAFESPEAAETAVDA 251
Query: 386 LNCSGVVLGSLPIRV 400
LN +V G P+ V
Sbjct: 252 LNGKELVEGK-PLYV 265
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 19/155 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD- 70
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F +R P + + +P+ R+ ++ N+D+ + D K ++
Sbjct: 71 ---TMNFDLIRGRPIRIMWSQRDPSL-------RKSGVGNVFIKNLDRSI---DNKAMYD 117
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESA 382
S G + ++ D + +++ FV F E+A
Sbjct: 118 TFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAA 152
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR------------------- 272
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNDLHPKMKSV 401
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 332
+A+I F EE + AL++ GT VRV S ++ D+ E ++++
Sbjct: 402 YAYIRFESEESTKKALSINGTKFEGNYVRVDMS------------TKSNDKYE-TKKSVF 448
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF--VEFVMAESAIAALNCSG 390
N+ V V+ F+ CGE+ +R++ D F V F ++ AL G
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 391 VVLGSLPIRVSP 402
+ + +RV P
Sbjct: 508 TTILNREVRVKP 519
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV--LRFAFIEFTDEEGARAALN 289
R++YV D++ V E QL LF VV R+C D + L +A++ F++ + A A+
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAME 92
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ L F P+ P + + +PT R ++ N+D K+ D K +
Sbjct: 93 V----LNFTPLNGKPIRIMFSHRDPT-------TRRSGHANVFIKNLDTKI---DNKALY 138
Query: 350 ESVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
E+ G V ++ D + S F++F E A +A+N +G+++ + V P
Sbjct: 139 ETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGP 195
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGA 284
E++ +Y+ ++ + EE+L LF G + C++ D + + + F+ F T EE +
Sbjct: 310 EKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEAS 369
Query: 285 RAALNLAGTMLGFYPVRV 302
RA + G M+G P+ V
Sbjct: 370 RALSEMNGKMIGKKPLYV 387
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
VYV ++ + ++E L +F G + + D N R F F+ F + A AA+ L
Sbjct: 214 VYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLN 273
Query: 292 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRTEDER-----EMCARTIYCTNIDKKVTQA 343
G +Y R A + F E ER +M A +Y N+ + +
Sbjct: 274 GMTFSDKVWYVGRAQRKGEREAELKAKF----EQERNSRYEKMKAANLYLKNLGDTIDEE 329
Query: 344 DVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
+K F S G + +++ D ++ FV F E A AL+ +G ++G P+ V+
Sbjct: 330 RLKELF-SEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVA 388
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF+D++ R ++ L ++ ++V+P +T
Sbjct: 246 EFSDKDSVRTSMALDDSLFRGRQIKVIPKRT 276
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 191 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 249
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
+S ++ + I+V P +T
Sbjct: 250 KDSVRTSMALDDSLFRGRQIKVIPKRT 276
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARA 286
+ ++YV D+DQ V E QL LF QVV R+C D L +A++ F+ + A
Sbjct: 32 FLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVN 91
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A+ L F PV P + I+ +P+ R+ ++ N+D + ++
Sbjct: 92 AME----HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALR 140
Query: 347 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESA-IAALNCSGVVL 393
F + G V ++ D + S FV+F ESA I+ +G++L
Sbjct: 141 DTF-AAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLL 188
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
VYV ++ + T++ L LF G + + D N + F F+ F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER-----EMCARTIYCTNIDKKVTQADVK 346
GT+LG + A + E ER ++ +Y N+D + +K
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKLK 334
Query: 347 LFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
F S G + +++ D H ++ FV F + A ALN +G + G P+ V+
Sbjct: 335 ELF-SEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYVA 390
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T++V +I VT+E LA F G+VV RI N FA +EF+ E A+ ALN +
Sbjct: 316 KTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKS 375
Query: 292 GTMLG---FYPVRVLPSKT-AIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK- 346
G +G Y P T A P P R+ T++ DK + ++
Sbjct: 376 GQDMGGRRIYCDLANPRGTPASGPKRDRPSPGFNGNRKTSGNTVFVKGFDKYQEEDSIRD 435
Query: 347 ---LFFESVCGEVYRLRLLGDYHHS--TRIAFVEF 376
F+S CG + R+++ D A++EF
Sbjct: 436 SLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEF 469
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 12/200 (6%)
Query: 213 GKRRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS 269
G+R + + A+ E E +RTV+ I + TE + F G+V D R+ D NS
Sbjct: 156 GRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNS 215
Query: 270 VLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
++EF D A+ L+G +L PV V PS+ V T
Sbjct: 216 RRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGP 275
Query: 328 ----ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESA 382
AR +Y N+ +T+ +++ F G V +++ + + H F++F E A
Sbjct: 276 YSGGARRLYVGNLHPNITEDNLRQVF-GAFGTVELVQMPVDESGHCKGFGFIQFTRLEDA 334
Query: 383 IAALNCSGVV-LGSLPIRVS 401
AL+ +G + + I+VS
Sbjct: 335 RNALSLNGQLEIAGRTIKVS 354
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 313 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTR 370
+ T P + ER+ RT++ I K T+ DV FF S G+V +RL+ D + S
Sbjct: 164 DETAEPEADPERDQ--RTVFAYQISLKATERDVYEFF-SRAGKVRDVRLIMDRNSRRSKG 220
Query: 371 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
+ +VEFV A S A+ SG +L S P+ V PS+
Sbjct: 221 VGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSE 254
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ VTE L +F G G V R+C D SV R +A++ F + A AL
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRD--SVTRRSLGYAYVNFHNVADAERAL 92
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + P+R + + +PT R+ ++ N+DK + D K
Sbjct: 93 DT----LNYSPIRGKQCRIMWSHRDPTL-------RKAGNANVFVKNLDKTI---DNKAL 138
Query: 349 FE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
++ S+ G + ++ D +R FV F ESA A+ +G+++G + V P
Sbjct: 139 YDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGP 196
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARA 286
+ ++YV D+DQ V E QL LF QVV R+C D L +A++ F+ + A
Sbjct: 32 FLSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVN 91
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
A+ L F PV P + I+ +P+ R+ ++ N+D + ++
Sbjct: 92 AME----HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALR 140
Query: 347 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESA-IAALNCSGVVL 393
F + G V ++ D + S FV+F ESA I+ +G++L
Sbjct: 141 DTF-AAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLL 188
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
VYV ++ + T++ L LF G + + D N + F F+ F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 292 GTMLG----FYPVRVLPSKTAIAPVNPTFLPRTEDER-----EMCARTIYCTNIDKKVTQ 342
GT+LG Y R A + F E ER ++ +Y N+D +
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELKAKF----EQERKSRFEKLQGANLYIKNLDDHIDD 330
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
+K F S G + +++ D H ++ FV F + A ALN +G + G P+ V
Sbjct: 331 EKLKELF-SEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYV 389
Query: 401 S 401
+
Sbjct: 390 A 390
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
++ ++ E R++YV ++ T E+L F GCG + + C + G P FA+I
Sbjct: 80 TMEEKMETDNRSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKG---FAYI 136
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EFT++E A+L L G++L ++V+P +T
Sbjct: 137 EFTEKESVDASLALDGSILCGRQIKVMPKRT 167
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 317 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFV 374
L + ++E + T+ N+D K + D+ FF V G+V ++ + D S +A+V
Sbjct: 581 LQKEQEEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYV 640
Query: 375 EFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
EF E+ + AL+ +G +L + PI++ S+ + RA + H
Sbjct: 641 EFYTQEAVVKALSANGYMLKNRPIKIQSSQAE-KNRAAKAAKH 682
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
++ ++ E R++YV ++ T E+L F GCG + + C + G P FA+I
Sbjct: 80 TMEEKMETDNRSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKG---FAYI 136
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EFT++E A+L L G++L ++V+P +T
Sbjct: 137 EFTEKESVDASLALDGSILCGRQIKVMPKRT 167
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
T+ N+D K + D+ FF V G+V ++ + D S +A+VEF E+ I AL
Sbjct: 488 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVIKALA 547
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
+G++L + PI++ S+ + RA + H
Sbjct: 548 ANGMMLKNRPIKIQSSQAE-KNRAAKAAKH 576
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 190 NHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLA 249
+H A N NV+ + GQ R N + A + ++YV D+ Q VTE L
Sbjct: 45 DHTAGNANVSGGVSGTTTAPAGQ---RPNGGMN-AGAANFVSPSLYVGDLHQDVTEAMLF 100
Query: 250 ALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSK 306
+F G V R+C D + L +A++ + + A +L+ L T++ P R++
Sbjct: 101 EVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM--- 157
Query: 307 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRL-LG 363
+ R R+ I+ N+DK + D K ++ S+ G + ++ +
Sbjct: 158 ---------WCHRDPSLRKSGNGNIFVKNLDKNI---DNKALYDTFSLFGNILSCKVAVD 205
Query: 364 DYHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
D HS FV + ESA +A++ +G+++G + V P
Sbjct: 206 DNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGP 245
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFI 276
S S +Q+ E ++YV ++D V+E L +F G V R+C D + L +A++
Sbjct: 27 STDSDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYV 86
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
F D E R A+ L + P++ P + + +P+ R+ + I+ N+
Sbjct: 87 NFNDYEAGRQAIE----KLNYTPIKGQPCRIMWSQRDPSL-------RKKGSGNIFIKNL 135
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ + F SV G + ++ D +S FV F E+A A++ +G++L
Sbjct: 136 HADIDNKALHDTF-SVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLL 194
Query: 394 GSLPIRVSP 402
+ V+P
Sbjct: 195 NGQEVYVAP 203
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VT+ QL +F GQVV R+C D + L + ++ +T + A AL++
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P P + + +P+ R+ I+ N+DK + + F
Sbjct: 98 ----LNFTPFNNKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKTIDHKALHDTFS 146
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
S G + ++ D +R FV+F E+A A++ +G++L
Sbjct: 147 SF-GNILSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGMLL 190
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D +++E L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 320 LYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 379
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 380 GKMVVSKPLYV 390
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ ++L A F G Q+V R+ G V ++EF +E
Sbjct: 172 DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKNE 228
Query: 282 EGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 339
E AA+ L G L P+ ++ ++ NP T + ++ +Y NI
Sbjct: 229 ESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHFS 286
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLP 397
+T+AD++ FE GE+ ++L + +R FV+F A AL +G L P
Sbjct: 287 ITEADLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRP 345
Query: 398 IRV 400
IRV
Sbjct: 346 IRV 348
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ VTE L +F G V R+C D SV R +A++ + + A AAL
Sbjct: 28 SLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 289 -NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
NL + +P R++ S R R+ A I+ N+DK + D K
Sbjct: 86 ENLNYIEIKGHPTRIMWSN------------RDPSLRKSGAGNIFVKNLDKSI---DTKS 130
Query: 348 FFESVC--GEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+++ G + ++ D S R FV + ESA A+ +G+++G + V+P
Sbjct: 131 LYDTFAHFGTILSCKVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAP 189
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
V K++ +++M S+ + QR++ + VYV I ++ E+ + F+ G +
Sbjct: 43 VLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSI 102
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ DP + FAF+E+ E A+ AL + G M+G ++V+ + + P + +
Sbjct: 103 NMSWDPVTQKHKGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVID 161
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV 377
+E + R IY +I + +T+ D+K FE+ Y +L H F+E+
Sbjct: 162 EITEESKHYNR-IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYE 220
Query: 378 MAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
++A+ A+ + LG +RV + TP
Sbjct: 221 TMQAALEAIASMNLFDLGGQYLRVGRAITP 250
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+EE L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRV--FLDKEIKVNWATSPGN---TPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRP 409
+ P
Sbjct: 175 LPP 177
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NLA 291
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+ +
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 349
G + V V+ F+PR + E+E + +Y N+ ++ T+ ++ F
Sbjct: 165 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 213
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
E G + +L+ D S + FV F +SA+AA + G LG
Sbjct: 214 EPY-GRITSHKLMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLG 259
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
E + + V+ I Q TEE LA +F G+V +I D N+ F F+++ +EE A
Sbjct: 23 ECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEEDAA 82
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A+ + M Y + L + P +M A +Y TN+ K VT+ DV
Sbjct: 83 KAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTEDDV 129
Query: 346 KLFFESVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAAL-NCSGVVL--GSLPIRV 400
F S GE+ + +L D +AFV F E A AA+ + G +L LP+ V
Sbjct: 130 HRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAMLPLSV 188
Query: 401 SPSKTPVRPRAPRL 414
++ R +A L
Sbjct: 189 RVAEDHGRQKAQYL 202
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 213 GKRRMNSRTSLAQREE---IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDP 267
GK+ S T++ +E ++R+V+VS + + + F CG + + ++ D
Sbjct: 2 GKKVEQSNTTVEVQENNDPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDT 61
Query: 268 NSVLRFAFIEFTDEEGARAALNLAGTMLG--FYPVRVLPSKTAIAPVNPTFLPRTEDERE 325
++ + + F+ E A+ A+ L ++ + + + + + N P E
Sbjct: 62 GKIIGYCHLVFSTPEEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAP------E 115
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAES 381
C TI+ N+ T+ +V FFE CG+V +R + YH+S + AF+EF M S
Sbjct: 116 DCT-TIFVKNLAFDCTEDEVGEFFEK-CGKVVNVRFV--YHYSQKHFKGFAFIEFKMNSS 171
Query: 382 AIAALNCSGV 391
AAL +G
Sbjct: 172 VNAALKLNGT 181
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 209 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC--GD 266
S +G++++ + + E+ T++V ++ TE+++ F CG+VV+ R
Sbjct: 97 SLAKGEKKVEYKNDVKAPEDCT--TIFVKNLAFDCTEDEVGEFFEKCGKVVNVRFVYHYS 154
Query: 267 PNSVLRFAFIEFTDEEGARAALNLAGT 293
FAFIEF AAL L GT
Sbjct: 155 QKHFKGFAFIEFKMNSSVNAALKLNGT 181
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFT 279
SL +R + TVYV +D++VTE LA LF+ G VV+C + D + + F+EF
Sbjct: 3 SLTERNQ--DATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFL 60
Query: 280 DEEGARAALNLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
E+ A A+ + + F PVRV +K + + + ++ N+D
Sbjct: 61 SEDDADYAIKILNMIKLFGKPVRV--NKAS-----------SHQKNLDVGANLFIGNLDP 107
Query: 339 KVTQADVKLFFES-----VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVV 392
++ D KL +++ V + ++ D +S AF+ + E+A AAL +G
Sbjct: 108 EI---DEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQY 164
Query: 393 LGSLPIRVS 401
L + PI +S
Sbjct: 165 LCNRPITIS 173
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAAL 288
++TV+V ++ +V +E+L LF CG VV R+ D + + F F+ F +GA AL
Sbjct: 341 KQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALAL 400
Query: 289 NLAGTMLGFYPVRVLP-SKTAI 309
+ G + P+RV P SK A+
Sbjct: 401 EMTGREVSGRPIRVSPFSKQAV 422
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 274 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
A++ F +E AL+L G +L +RV + P+++ + +T++
Sbjct: 300 AYVVFKAKEAVNKALSLNGGVLFGNHIRV----------DCVGAPKSQVSEK---QTVFV 346
Query: 334 TNIDKKVTQADV-KLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAALNCSG 390
N+ +V ++ KLF E CG+V +RL+ D FV F + A AL +G
Sbjct: 347 GNLAHEVQDEELWKLFAE--CGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALALEMTG 404
Query: 391 VVLGSLPIRVSP-SKTPVRPRA 411
+ PIRVSP SK V +A
Sbjct: 405 REVSGRPIRVSPFSKQAVPKKA 426
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VT+ QL LF GQVV R+C D S L + ++ + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +PT R I+ N+DK + + F
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAIDHKALHDTF- 135
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D ++ FV++ E+A A+ +G++L + V P
Sbjct: 136 SAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGP 189
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 291
+Y+ ++D +++E+L LF G + C++ DP+ V + + F+ F++ EE +RA +
Sbjct: 311 LYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMN 370
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAF 275
+S + A ++ ++YV ++D V+E L LF G V R+C D + L +A+
Sbjct: 33 SSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAY 92
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F+D E + A+ L + P++ + + +P+ R+ I+ N
Sbjct: 93 VNFSDHEAGKQAIE----KLNYTPIKGKLCRIMWSQRDPSL-------RKKGHGNIFIKN 141
Query: 336 IDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAALNCS 389
+++ + D K F+ SV G + ++ D ++ + F E A AI ALN
Sbjct: 142 LNQDI---DNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALN-- 196
Query: 390 GVVLGSLPIRVSPSKT 405
G++L I V+P T
Sbjct: 197 GMLLNGQEIYVAPHLT 212
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 153 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 209
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D+E R +L L ++ ++V+P +T
Sbjct: 210 EFCDKESVRTSLALDESLFRGRQIKVVPKRT 240
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVM 378
E++ E AR+IY N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 155 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFTGHPKGFAYIEFCD 213
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES +L + I+V P +T
Sbjct: 214 KESVRTSLALDESLFRGRQIKVVPKRT 240
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFT 279
SL +R + TVYV +D++VTE LA LF+ G VV+C + D + + F+EF
Sbjct: 3 SLTERNQ--DATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFL 60
Query: 280 DEEGARAALNLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
E+ A A+ + + F PVRV +K + + + ++ N+D
Sbjct: 61 SEDDADYAIKILNMIKLFGKPVRV--NKAS-----------SHQKNLDVGANLFIGNLDP 107
Query: 339 KVTQADVKLFFES-----VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVV 392
++ D KL +++ V + ++ D +S AF+ + E+A AAL +G
Sbjct: 108 EI---DEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQY 164
Query: 393 LGSLPIRVS 401
L + PI +S
Sbjct: 165 LCNRPITIS 173
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 210 FGQGK---RRMNSRTSLAQ--REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 264
FG+G+ RR R Q +E RRTV+V + ++ +L F G V + +I
Sbjct: 151 FGRGRDDDRREPKRDGTPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIV 210
Query: 265 GDPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKT----------AIAPV 312
D S ++EF +EE AL L G L PV V ++ A P
Sbjct: 211 KDRISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGP- 269
Query: 313 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-I 371
+P +P +Y NI VT+ D++ FE GE+ ++L D + +R
Sbjct: 270 HPNSIP---------FHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGY 319
Query: 372 AFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
FV+F A A AL +G L PIRV
Sbjct: 320 GFVQFRDAGQAREALEKMNGFDLAGRPIRV 349
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
+L ++ + R++Y+ +D T E+L F GCG + + C + G P FA+I
Sbjct: 78 TLEEKVDADNRSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKG---FAYI 134
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
EFT++E AA+ L G+M ++V+P +T V+ T
Sbjct: 135 EFTEKESVDAAIALDGSMFRDRQIKVMPKRTNKPGVSST 173
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 43/215 (20%)
Query: 209 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 263
S G+G+R L + +E RRTV+V + ++ ++L A F G Q+V R+
Sbjct: 183 SGGRGRRSRTPEPQLTE-DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 241
Query: 264 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 323
G V ++EF DEE A+ L G L P+ IA + TE E
Sbjct: 242 SGRSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPI--------IAQL-------TEAE 283
Query: 324 REMCART----------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH 367
+ AR +Y NI +T++D++ FE GE+ ++L +
Sbjct: 284 KNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGG 342
Query: 368 STR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
+R FV+F A AL +G L PIRV
Sbjct: 343 RSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRV 377
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTD 280
+E I ++VYV ++D VT E+L + F CG V + C + G P FA+IEF++
Sbjct: 49 KESIDAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKG---FAYIEFSE 105
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAI 309
AL L G+ML P++V P +T +
Sbjct: 106 PSLVPNALLLNGSMLHERPLKVTPKRTNV 134
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMA 379
D+ + A+++Y N+D VT +++ F S CG V R+ +L D H A++EF
Sbjct: 48 DKESIDAQSVYVGNVDYSVTPEELQSHFAS-CGSVNRVTILCDKFTGHPKGFAYIEFSEP 106
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPV 407
AL +G +L P++V+P +T V
Sbjct: 107 SLVPNALLLNGSMLHERPLKVTPKRTNV 134
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEE 282
A+ +EI +RT+YV ++ + TE L ALF G VVD ++ D S + FI +
Sbjct: 39 AKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYETHV 98
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
GA+ AL + V +P K VN P + I+ ++ +++T
Sbjct: 99 GAQRAL----AAMNGRDVYKMPLK-----VNWATRPDGIKKDTSKDHHIFVGDLAQELTT 149
Query: 343 ADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL 386
D++ FE G++ R++ D S FV F+ ESA A+
Sbjct: 150 LDLQNEFEKF-GKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAI 194
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 220 RTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEF 278
+T A+ EE VY+ ++D V E+ L F G++V I D N + + +AF+ F
Sbjct: 190 KTDRAKAEEKYT-NVYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNF 248
Query: 279 TDEEGAR-AALNLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--IY 332
E AR AA + GT G Y R + F + E E+ M A+ IY
Sbjct: 249 DKPEDARWAAETMNGTRFGSKCLYVGRAQKKAEREQLLREQFKEKHE-EQMMKAKVSNIY 307
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SG 390
NI+ VT+ +++ F S CG + +L+ D ++ FV F E AI A+ G
Sbjct: 308 VKNINVGVTEEELRKHF-SQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHG 366
Query: 391 VVLGSLPIRVSPSK 404
+ P+ V+ ++
Sbjct: 367 KMFHGKPLYVATAQ 380
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDE 281
+Q+ E ++YV ++D V+E L +F G V R+C D + L +A++ F D
Sbjct: 34 SQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDH 93
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
E + A+ L + P++ +P + + +P+ R+ + I+ N+ +
Sbjct: 94 EAGKTAIE----KLNYAPIKGVPCRIMWSQRDPSM-------RKKGSGNIFIKNLHPDID 142
Query: 342 QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVLGSLPIR 399
+ F SV G + ++ D ++R FV F E+A A++ +G++L +
Sbjct: 143 NKALHDTF-SVFGNILSCKIATDEAGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEVY 201
Query: 400 VS 401
V+
Sbjct: 202 VA 203
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAG 292
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFFE 350
M L + + V F+PR + E+E + +Y N+ ++ T+ ++ FE
Sbjct: 175 GM--------LCNNQKVHVV--KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFE 224
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
G + +L+ D S R FV + +SA+AA + G LG
Sbjct: 225 PY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 286
R++YV ++D T E+L A F GCG V + C + G P FA+IEF+D+E R
Sbjct: 6 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 62
Query: 287 ALNLAGTMLGFYPVRVLPSKT 307
+L L ++ ++V+P +T
Sbjct: 63 SLALDESLFRGRQIKVIPKRT 83
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 323 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHH----STRIAFVEFVM 378
+RE+ R++Y NID T AD+K + CGE+ R+ +L Y+H S A+VEF
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDD-CGEINRITIL--YNHYTGRSKGFAYVEFND 132
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV 407
E A AA+ +G L S + + +T +
Sbjct: 133 VEGAKAAIELNGTELYSRALTIQQKRTNI 161
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
EI RR+VYV +ID T L + CG++ I + FA++EF D EGA+
Sbjct: 78 EIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEGAK 137
Query: 286 AALNLAGTMLGFYPVRVLPSKTAI 309
AA+ L GT L + + +T I
Sbjct: 138 AAIELNGTELYSRALTIQQKRTNI 161
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAG 292
+Y+ ++++ + + + F G +++C + D + R + F+ F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFFE 350
M L + + V F+PR + E+E + +Y N+ ++ T+ ++ FE
Sbjct: 175 GM--------LCNNQKVHVV--KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMFE 224
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAA-LNCSGVVLG 394
G + +L+ D S R FV + +SA+AA + G LG
Sbjct: 225 PY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 209 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 263
S G+G+R L + +E RRTV+V + ++ ++L A F G Q+V R+
Sbjct: 183 SGGRGRRSRTPEPQLTE-DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 241
Query: 264 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTE 321
G V ++EF DEE A+ L G L P+ ++ ++ NP +
Sbjct: 242 SGRSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSG 297
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAE 380
++ + +Y NI +T++D++ FE GE+ ++L + +R FV+F
Sbjct: 298 NQNSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPN 356
Query: 381 SAIAAL-NCSGVVLGSLPIRV 400
A AL +G L PIRV
Sbjct: 357 QAREALEKMNGFDLAGRPIRV 377
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
+A +R K FGQ + + L TVYV++ ++ + LF CG+++
Sbjct: 655 SALLRDGKYFGQSQLTVKLGNDL---------TVYVANYPPAADQKYIRDLFKDCGEILS 705
Query: 261 CRICG-DPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
R+ ++ RF ++ F D+E + A+ GT+L + + + P
Sbjct: 706 IRLPSLKVDARRRFCYVSFRDQEASAKAVKKDGTVL----------EGGLKLLAKYSDPS 755
Query: 320 TEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVE 375
+ RE R I+ +N+D+ T+AD+K F S G V R+ L + T+ AF++
Sbjct: 756 HKKAREGALAEGREIHISNLDRTATEADLKEVF-SKYGNVTRVNLPRNLVGKTKGFAFID 814
Query: 376 FVM---AESAIAALN 387
F AE A+A +N
Sbjct: 815 FATKEEAEKAVAEMN 829
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCG-QVVDCRICGDPNS-VLRFAFIEFTDEEGAR 285
E+ + T+YV +ID V+E+ L LF G Q+ +I D N +AFIE+ D A
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 286 AALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AL L GT+L YP+++ T+ RT+ R T++ ++ ++
Sbjct: 213 NALQALNGTVLANYPLKI------------TWAYRTQQSRSGENFTLFVGDLSPEIDDDS 260
Query: 345 VKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIR 399
+ F V + ++ D S FV F AE+ + +N G+ LG IR
Sbjct: 261 LAATFSKFPSFV-QANVMWDMKTGRSRGYGFVSFQNNQDAETVLQTMN--GMSLGGRSIR 317
Query: 400 V 400
+
Sbjct: 318 L 318
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
T+ N+D K + D+ FF V G+V ++ + D S +A+VEF +S I AL+
Sbjct: 319 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVIKALS 378
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
+G +L + PI+V S+ + RA + H
Sbjct: 379 VNGYMLKNRPIKVQSSQAE-KNRAAKATKH 407
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VT+ QL LF GQVV R+C D S L + ++ + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +PT R I+ N+DK + + F
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAIDHKALHDTF- 135
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ E+A A+ +G++L + V P
Sbjct: 136 SAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGP 189
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D +++++L LF G + C++ DP+ V + + F+ F T EE +RA +
Sbjct: 311 LYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMN 370
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ V++ ++D+ + + L F G ++ C+I D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENGSKGYGF 142
Query: 276 IEFTDEEGARAALNLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 331
+ F EE AR A+ ML Y + +P K IA + ++ +
Sbjct: 143 VHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIALLG---------DKMKRFNNV 193
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCS 389
Y N ++ ++ F+ G++ +++ D +R FV + E+A A+ N +
Sbjct: 194 YIKNFGDELDDDKIRELFDPF-GKIISAKVMTDEIGKSRGFGFVSYEEPEAAEKAVDNLN 252
Query: 390 GVVLG 394
G+ LG
Sbjct: 253 GMELG 257
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG--TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
T+ G P+R++ S+ R R+ ++ N+DK + D K
Sbjct: 72 MNFDTIKG-RPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKAL 115
Query: 349 FE--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
++ S G + ++ D + S FV F E+A A+ +G++L
Sbjct: 116 YDTFSAFGNILSCKIASDENGSKGYGFVHFETEEAARQAIEKVNGMLL 163
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 209 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 263
S G+G+R L + +E RRTV+V + ++ ++L A F G Q+V R+
Sbjct: 179 SGGRGRRSRTPEPQLTE-DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 237
Query: 264 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTE 321
G V ++EF DEE A+ L G L P+ ++ ++ NP +
Sbjct: 238 SGRSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSG 293
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAE 380
++ + +Y NI +T++D++ FE GE+ ++L + +R FV+F
Sbjct: 294 NQNSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPN 352
Query: 381 SAIAAL-NCSGVVLGSLPIRV 400
A AL +G L PIRV
Sbjct: 353 QAREALEKMNGFDLAGRPIRV 373
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ ++L F G V + +I D N ++EF +E+
Sbjct: 174 DERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDSV 233
Query: 285 RAALNLAGTMLGFYPVRVL------------PSKTAIAPVNPTFLPRTEDEREMCARTIY 332
+AAL L G L PV V P T P + F +Y
Sbjct: 234 QAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGNHPNSIPF------------HRLY 281
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSG 390
NI +T+ D++ FE GE+ ++L D +R FV+F A A AL +G
Sbjct: 282 VGNIHFSITEQDLQNVFEPF-GELEFVQLQKDDTGRSRGYGFVQFRDATQAREALEKMNG 340
Query: 391 VVLGSLPIRV 400
L PIRV
Sbjct: 341 FDLAGRPIRV 350
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVE 375
P TEDER+ RT++ + ++ ++K FFE V G V +++ D + S + +VE
Sbjct: 170 PLTEDERDR--RTVFVQQLAARLRTKELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 226
Query: 376 FVMAESAIAALNCSGVVLGSLPIRV 400
F +S AAL +G L +P+ V
Sbjct: 227 FKNEDSVQAALQLTGQKLLGIPVIV 251
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
+ + ++YV D++ V+E QL +F GQVV R+C D L ++++ + + + A
Sbjct: 20 QFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDAT 79
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL L L F V P + + +P+ R+ I+ N+DK + +
Sbjct: 80 RALEL----LNFTGVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSIDNKAL 128
Query: 346 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F + G + ++ D S FV+F ESA A+ +G++L + V P
Sbjct: 129 HDTF-AAFGNILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGP 186
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 10/171 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
VYV I TE+ + + F CG + VDC + + A I F E A+ AL L
Sbjct: 184 VYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISFKTEAAAKRALALD 243
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA--RTIYCTNIDKKVTQADVKLFF 349
G +G +++ P KT A + F P EM IY N+ +T+ +V+ FF
Sbjct: 244 GADMGGLFLKIQPYKTTRANKSSDFAP------EMVEGYNRIYVGNLPWDITEDEVRKFF 297
Query: 350 ESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
R + + A V+F S AL ++ P ++
Sbjct: 298 SRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKI 348
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 328 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAA 385
ARTI+C + +++ D++ FF SV G+V ++L+ D H S IA+VEF ES A
Sbjct: 103 ARTIFCMQLAQRIRVRDLEEFFSSV-GKVREVKLIQDKHSKRSKGIAYVEFKDLESIPLA 161
Query: 386 LNCSGVVLGSLPIRVSPSKT 405
L SG L +PI V P+++
Sbjct: 162 LGLSGQKLLGVPIVVQPTQS 181
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 289
RT++ + Q++ L F G+V + ++ D +S A++EF D E AL
Sbjct: 104 RTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIPLALG 163
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L+G L P+ V P+++ + L + + + +Y ++ + +T+ +K F
Sbjct: 164 LSGQKLLGVPIVVQPTQSEKNKIAAAQL--SLQKAALGPTKLYVGSLHENITEEMIKGIF 221
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G V +++++ D ++R F+ F AE A AL+ +G + PI++
Sbjct: 222 -SPFGRVEQVQIIKDDAGASRGYGFITFAEAECAKRALDQLNGFEIAGKPIKL 273
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ ++L A F G Q+V R+ G V ++EF +E
Sbjct: 172 DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKNE 228
Query: 282 EGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 339
E AA+ L G L P+ ++ ++ NP T + ++ +Y NI
Sbjct: 229 ESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHFS 286
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLP 397
+T++D++ FE GE+ ++L + +R FV+F A AL +G L P
Sbjct: 287 ITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRP 345
Query: 398 IRV 400
IRV
Sbjct: 346 IRV 348
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+D V + QL LF QVV RIC D L + ++ F++ A A+++
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P L KT + + R R+ A ++ N+DK + D K F+
Sbjct: 85 ----LNFTP---LNGKT----IRIMYSIRDPSARKSGAANVFIKNLDKAI---DHKALFD 130
Query: 351 --SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ D S FV+F ESA A++ +G+++ + V P
Sbjct: 131 TFSAFGNILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGP 186
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRTV--------YVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ +++ L +R E+ + TV Y+ ++D V +E+L LF G + C
Sbjct: 276 GKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKNLDDSVGDEELRELFSEFGTITSC 335
Query: 262 RICGDPNSVLRFA-FIEFTDEEGARAALN-LAGTMLGFYPVRV 302
++ DP+ + R + F+ F+ EGA AL + G M+ P+ V
Sbjct: 336 KVMRDPSGISRGSGFVAFSIAEGASWALGEMNGKMVAGKPLYV 378
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV D+D VT+ QL F G VV R+C D + L + ++ FT+ ++ ARA
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L P+RV+ S R R A I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
SV G + ++ D S FV++ ESA A+ +G++L + V P
Sbjct: 145 -SVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D +++E+L +F G V C++ DPN + + F+ F T EE A L+
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLS 379
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 380 GKMIESKPLYV 390
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 290
++YV D++Q V EEQL LF QVV R+C D S L + ++ F++ + A A+
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMK- 104
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ ++ N+D + D KL E
Sbjct: 105 ---ALNFTPLNGKPIRIMFSHRDPSI-------RKSGYGNVFIKNLDSTL---DNKLLHE 151
Query: 351 SVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
+ G V ++ D + S FV+F ESA A++
Sbjct: 152 TFAAFGTVLSCKVAVDSNGQSKGYGFVQFENEESAERAIS 191
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ IR++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 117 RIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNGQSKGYG 176
Query: 275 FIEFTDEEGARAALNLAGTM--------LGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 326
F++F +EE A A++ M +GF+ + ++T +P
Sbjct: 177 FVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRTNGSP--------------- 221
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAA 385
+Y N+ + +T D++ F V G + ++ D +R FV F +SA AA
Sbjct: 222 KFTNVYVKNLSETITNEDLEKVF-GVYGTITSALVMKDQTGKSRGFGFVNFQDPDSAAAA 280
Query: 386 L 386
+
Sbjct: 281 V 281
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T+YV++ E + LF CG++VD R NS RF +++F + A+ A +L
Sbjct: 747 TLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRRFCYVQFASSDEAQKATSLH 806
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC---ARTIYCTNIDKKVTQADVKLF 348
G LG +T +A ++ P + ER R +Y NID + DV+
Sbjct: 807 GKQLG-------GKETLVAKISA---PDQKHERSGAVYEGREVYIRNIDFQAHDNDVQEL 856
Query: 349 FESVCGEVYRLRLLGDYHHSTR--IAFVEFVMAESAIAAL 386
F+ G + ++RL T FV F E A+AA+
Sbjct: 857 FQKY-GRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALAAV 895
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 226 REEIIRRT---VYVSDIDQQVTEEQLAALFVGCGQVVDCRI-----CGDPNSVLRFAFIE 277
++EI R+T VYV I + +E + F CG V + R+ G P +A +
Sbjct: 53 KDEIDRKTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRG---YAHVV 109
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAP--VNPTFLPRTEDEREMCA---RTIY 332
F DE AL L G L R L + A AP V +T++ + RT+Y
Sbjct: 110 FDDEAALEKALELDGQYLFN---RYLSIRRAEAPRAVEMALKEKTQNATKKAVKGCRTVY 166
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI---AFVEFVMAESAIAALNCS 389
+ +V + ++ S CG + +R L ++H+ ++ +VEF + A+AA S
Sbjct: 167 IKQLPYEVEEDTIRQALAS-CGTITSVR-LPIWNHTKKLKGFGYVEFSSEDEALAAARRS 224
Query: 390 GVVLGSLPIRVSPSKTPVRPRA 411
G+ +G + +S P+A
Sbjct: 225 GMKIGDRMVLISLDVAGSAPKA 246
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
+ ++YV D+D VTE L +F V RIC D + L +A++ + A A
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+ L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRGRPCRIMWCLRDPA-------SRRNNDGNVFVKNLDKSI---DNKT 115
Query: 348 FFE--SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
F+ S+ G + ++ D S F+ F A+SA A++ +G VLG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYV 172
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D+D VT+ QL LF GQVV R+C D ++ L + ++ +++ + A
Sbjct: 27 QFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 86
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 87 RALDV----LNFTPLNNKPLRIMYSHRDPSI-------RKSGMANIFIKNLDKTIDHKAL 135
Query: 346 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
F S G + ++ D S FV+F E+A A++
Sbjct: 136 HDTFSSF-GNILSCKVATDASGQSKGYGFVQFDSEEAAQNAID 177
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-T 279
SL E+ +Y+ ++D V +E+L LF G + C++ DP+ + R + F+ F T
Sbjct: 302 SLESVEKYQAVNLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFST 361
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSK 306
EE +RA L G M+ P+ V P++
Sbjct: 362 PEEASRALAELNGKMVVSKPLYVAPAQ 388
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
+ ++YV D+D VTE L +F V RIC D + L +A++ + A A
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+ L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRGRPCRIMWCLRDPA-------SRRNNDGNVFVKNLDKSI---DNKT 115
Query: 348 FFE--SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
F+ S+ G + ++ D S F+ F A+SA A++ +G VLG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYV 172
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 32/186 (17%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ ++++E L LF G ++ RIC D + L +A++ F + + A AL+
Sbjct: 7 SLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD- 65
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + V+ +P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 66 ---TLNYASVKGIPIRIMWSQRDPSI-------RKSGIGNIFIKNLDKSI---DNKALYD 112
Query: 351 S-----------VCGEVYRLRLLGDYHHSTRIAFVEFVM---AESAIAALNCSGVVLGSL 396
+ VC + GD S FV F AE AIA +N G++L
Sbjct: 113 TFSAFGNILSCKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKIN--GMLLNGK 170
Query: 397 PIRVSP 402
+ V P
Sbjct: 171 QVFVGP 176
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN-LAG 292
+YV ++D V +E+L F G + ++ D F F+ F E A AL ++G
Sbjct: 299 LYVKNLDDSVDDERLRQEFSKFGDITSAKVMSDNKQSRGFGFVCFKTPEAANKALTEMSG 358
Query: 293 TMLGFYPVRV 302
M+G P+ V
Sbjct: 359 HMIGSKPLYV 368
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 41/216 (18%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V +E L F G + D R+ D NS + F+ F TD E A A +
Sbjct: 110 VFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 169
Query: 289 NLAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRTED----ERE 325
N G LG +RV P T A AP+N P + D +
Sbjct: 170 N--GEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTP 227
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE-SAIA 384
T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E +A+A
Sbjct: 228 SYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEHAAMA 282
Query: 385 ALNCSGVVLGSLPIRVSPSK-----TPVRPRAPRLP 415
+ G ++ PI+ S K T +P P P
Sbjct: 283 IVQLQGQMVHGRPIKCSWGKDRADGTTAQPGGPLSP 318
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
+ S G + ++ D ++ FV F E+A +++ +G++L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
>gi|357134255|ref|XP_003568733.1| PREDICTED: uncharacterized protein LOC100843156 [Brachypodium
distachyon]
Length = 786
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
T + E +++ V +S++ +T E L LF CG+VVDC I + A++E++
Sbjct: 342 TGSVDKAEALKKMVQISNLSLLLTVEHLKQLFGYCGKVVDCTIT----ETKQTAYVEYSK 397
Query: 281 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 313
E A AAL L +G P+ V LP KT +A N
Sbjct: 398 PEEATAALALNNMDVGGRPLNVEMAKTLPPKTNLANSN 435
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 38/212 (17%)
Query: 215 RRMNSRTSLAQREEIIR---RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 271
R +NSR E + RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 322 RSLNSRQDKDSSLEDFKENERTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSL 381
Query: 272 R-------------------FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPV 312
+A+I F EE + AL++ G +RV S +
Sbjct: 382 NIPKRVAAITNELHPKMKSVYAYIRFESEESTKKALSVNGRKFEGNYIRVDMSMKS---- 437
Query: 313 NPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIA 372
++R ++++ N+ V V+ F+ CGE+ +R++ D
Sbjct: 438 ---------NDRYETKKSVFIGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQTGVGKG 487
Query: 373 F--VEFVMAESAIAALNCSGVVLGSLPIRVSP 402
F V F ++ AL G + + IRV P
Sbjct: 488 FGYVNFKSEDAVALALELDGTTILNREIRVKP 519
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 25/179 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFGF 142
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
+ F E A+ A+N + G +L + V V F R E E E+ AR + T
Sbjct: 143 VHFETHEAAQHAINTMNGMLLNDHKVFV-----------GHFKSRREREVELGARAMEFT 191
Query: 335 NIDKKVTQADV------KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL 386
NI K QADV +LF S G++ ++++ D HS FV F E A A+
Sbjct: 192 NIYVKNLQADVDEQGLQELF--SQFGKMLSVKVMRDSSGHSRGFGFVNFETHEEAQKAV 248
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
M+ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEASI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + ++ D H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQHAINTMNGMLL 163
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 26/176 (14%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNV- 198
D + LQELFS+ M S+ +++ GF F N F H V
Sbjct: 203 DEQGLQELFSQFGKML------SVKVMRDSSGHSRGFG---FVN----FETHEEAQKAVV 249
Query: 199 --NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQQVTEEQ 247
N R G+ ++R+ + L +R E +++ +YV ++D + +E+
Sbjct: 250 HMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDDEK 309
Query: 248 LAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPVRV 302
L F G + ++ + F F+ F+ EE +A + G ++G P+ V
Sbjct: 310 LRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARA 286
+ ++YV D+D V+E QL LF GQV+ R+C D L +A++ + + + A
Sbjct: 1 FVSTSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATR 60
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL L L F PV + + +P+ R+ I+ N+D+ + +
Sbjct: 61 ALEL----LNFTPVNGKAVRIMFSHRDPSI-------RKSGTANIFIKNLDRAIDNKALH 109
Query: 347 LFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
F S G + ++ D + S FV+F ESA A++ +G+++ + V P
Sbjct: 110 DTFVSF-GNILSCKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGP 166
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 279
++ E+ R+V+V ++D T EQL A F GCG + + C R G P FA++EF
Sbjct: 80 EKIEVDSRSVFVGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKG---FAYVEFA 136
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKT 307
D+E A+A+L + T+ ++VL +T
Sbjct: 137 DKESAQASLAMTDTLFRGRQIKVLEKRT 164
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G VVD +I D S ++EF +EE
Sbjct: 153 DERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRVSGRSKGVGYVEFKEEESV 212
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------- 330
+ A+ L G L P+ IA + TE E+ AR
Sbjct: 213 QKAIQLTGQKLLGIPI--------IAQL-------TEAEKNRQARNTEGTATQSNGIPFH 257
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFVMAESAIAAL-N 387
+Y NI +T+ D+K FE GE+ ++L + S FV+F+ A AL
Sbjct: 258 RLYVGNIHFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQFIDPAQAKEALEK 316
Query: 388 CSGVVLGSLPIRVS 401
+G L PIRV
Sbjct: 317 MNGFELAGRPIRVG 330
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAASTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRV--FLDKEIKVNWATSPGN---TPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRP 409
+ P
Sbjct: 175 LPP 177
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 19/202 (9%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+ + Q++ L F G+V D R+ D N R A++EF D E
Sbjct: 38 EERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVES 96
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR------TIYCTNID 337
A+ L G L P+ V P++ A N R +Y ++
Sbjct: 97 VPLAMGLNGQKLFGIPIVVQPTQ---AERNRAAAQSASTSSSTLQRGNIGPMRLYVGSLH 153
Query: 338 KKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLG 394
+T+ +K FE G++ ++ L+ D S F+ F +E A AL +G L
Sbjct: 154 FNITEDMLKGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELA 212
Query: 395 SLPIRVS--PSKTPVRPRAPRL 414
P++V +T V P+APRL
Sbjct: 213 GRPMKVGHVTERTDVVPKAPRL 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T +ER+M RT++C + +++ D++ FF +V G+V +RL+ D S IA+VEF
Sbjct: 36 TPEERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFQ 92
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES A+ +G L +PI V P++
Sbjct: 93 DVESVPLAMGLNGQKLFGIPIVVQPTQ 119
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 18/182 (9%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDEEGAR 285
+RT++V I Q+ L A F G Q+V R+ G V ++EF DEE
Sbjct: 149 KRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGV---GYVEFKDEESVA 205
Query: 286 AALNLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AL L G L P+ L P+ +Y NI VT+ D
Sbjct: 206 KALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEQD 265
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTR---IAFVEFV---MAESAIAALNCSGVVLGSLPI 398
+ F + GE+ ++ L D + R FV+FV A+ A+A +N G L I
Sbjct: 266 LHTIF-APFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAEMN--GFELAGRQI 322
Query: 399 RV 400
RV
Sbjct: 323 RV 324
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 72/179 (40%), Gaps = 12/179 (6%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEGARAA 287
+RT++V I Q+ L F G V++ +I D LR ++EF DEE A
Sbjct: 176 KRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKD-RVTLRSKGVGYVEFKDEESVAKA 234
Query: 288 LNLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L L G L P+ L P+ +Y NI VT+ D++
Sbjct: 235 LELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEGDLR 294
Query: 347 LFFE--SVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
FE +V R + S FV+FV A++A+A +N G L IRV
Sbjct: 295 DIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMN--GFELAGRQIRV 351
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 21/203 (10%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ +L F G Q+V RI G V ++EF E
Sbjct: 178 DERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKSE 234
Query: 282 EGARAALNLAGTMLGFYPVRVLPS-----KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
+ AL L G L PV V + + A P + P + + +Y NI
Sbjct: 235 DSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAHPNS-----VPFHRLYVGNI 289
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLG 394
VT+ D++ FE GE+ ++L D + +R FV+F A A AL +G L
Sbjct: 290 HFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLA 348
Query: 395 SLPIRVSPSKTPVRPRAPRLPMH 417
PIRV P + MH
Sbjct: 349 GRPIRVGLGNDKFTPESTANLMH 371
>gi|302914164|ref|XP_003051083.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
gi|256732021|gb|EEU45370.1| hypothetical protein NECHADRAFT_10800 [Nectria haematococca mpVI
77-13-4]
Length = 1061
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
+A +R K FGQ + + S L TVYV++ E + LF CG+++
Sbjct: 655 SALLRDGKYFGQSQLTVKSGLDL---------TVYVANFPPVADEAYIRNLFKDCGEILS 705
Query: 261 CRICG-DPNSVLRFAFIEFTDEEGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLP 318
R NS RF +I F D E + A+N G +L G Y + S P
Sbjct: 706 VRWPSLKVNSHRRFCYISFRDREASANAVNKEGKVLEGRYKLLAKYSD-----------P 754
Query: 319 RTEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFV 374
+ RE R ++ +N+D+ ++AD+K F S G+V R+++ + AF+
Sbjct: 755 NHKKAREGALSEGREVHISNLDRTASEADLKGVF-SKYGKVTRVKVPQTLSGKNKGFAFI 813
Query: 375 EFVM---AESAIAALNCSGVVLGSLPIRVSPSKTPVRPRA 411
+F AE A+A ++ + L + +S ++ V+P A
Sbjct: 814 DFETKEEAEKAVAEMDNTKFRSQILEVSLS-KESKVKPAA 852
>gi|146090988|ref|XP_001466413.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134070775|emb|CAM69132.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 449
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A E + V +S I T QL +F CG + D + AF+ +T EE
Sbjct: 130 ADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEEA 185
Query: 284 ARAALNLAGTMLGFYPVRVLPS---KTAIAPV---------NPTFLPRTEDEREMCARTI 331
AL L G M+ PV V P A AP N + R++ R +
Sbjct: 186 CEKALKLDGAMVNGNPVVVRPCPPRDDAPAPASRRDATRRGNESTTASAPSRRQLDVRVV 245
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGV 391
+ VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 246 V-HGVPSDVTKEALRAFFSPDCGSLTDVFIKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 392 VLGSLPIRV 400
+L +R+
Sbjct: 301 MLMGTRVRI 309
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 226 REEIIRRT---VYVSDIDQQVTEEQLAALFVGCGQVVDCRI-----CGDPNSVLRFAFIE 277
+EEI R+T VYV I + E L F CG V + R+ G P +A +
Sbjct: 59 KEEIDRKTEATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRG---YAHVV 115
Query: 278 FTDEEGARAALNLAGTML--GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
F DE + AL L G L + +R + A+ T + RT++
Sbjct: 116 FDDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTVFIKQ 175
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI---AFVEFVMAESAIAALNCSGVV 392
+ +V + ++ S CG + +R L ++H+ ++ +VEF + A+AA SG+
Sbjct: 176 LPYEVEEGTIREALAS-CGTITSVR-LPIWNHTKKLKGFGYVEFSSEDEALAAARRSGMK 233
Query: 393 LGSLPIRVSPSKTPVRPRA 411
+G + +S P+A
Sbjct: 234 IGDRMVLISLDAAGSAPKA 252
>gi|401424605|ref|XP_003876788.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493031|emb|CBZ28316.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 423
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 21/189 (11%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A E+ + V +S I T QL +F CG + D + AF+ +T EE
Sbjct: 130 ADAEKTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEEA 185
Query: 284 ARAALNLAGTMLGFYPVRVLPS---KTAIAPV---------NPTFLPRTEDEREMCARTI 331
AL L GTM+ PV V P A AP N + R++ R +
Sbjct: 186 YEKALKLDGTMVNGNPVAVRPCPPRDDAPAPASRRDAMRRGNEGTTTSAPNRRQLDVRVV 245
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGV 391
+ VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 246 V-HGVPSDVTKEALRAFFSPDCGPLTDVFIKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 392 VLGSLPIRV 400
+L +++
Sbjct: 301 MLMGTRVKI 309
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
T+YV ++D VTEE + ALF G V+ C+I +P + + F+EFTD + A AAL
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGND-PYCFVEFTDHQAAAAALLAMN 59
Query: 293 T--MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
LG + + A +P N P+ + + I+ ++ ++ +K F
Sbjct: 60 KRQCLG----KEMKVNWATSPGN---TPKQDTSKHY---HIFVGDLSPEIETQQLKEAFA 109
Query: 351 SVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
GE+ R++ D S FV FV AE+AIA +N G LGS IR
Sbjct: 110 PF-GEISDCRVVRDPQTLKSKGYGFVSFVKKTDAENAIATMN--GQWLGSRAIRT 161
>gi|242020567|ref|XP_002430724.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515914|gb|EEB17986.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 470
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
IRRTV ++++D+ + + + LF G+V R C P +A +EFTD+ AAL
Sbjct: 151 IRRTVVITNLDRSIGSQNVIELFSKAGEVKYVRFCFRPGDTANYALVEFTDQTSIIAALK 210
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNP 314
+ G L ++V S AI P
Sbjct: 211 MNGMQLAGNTIKVYHSIQAIVKPQP 235
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 75 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 134
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 135 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 182
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D Y +S FV + AE+A A+ + +G++L
Sbjct: 183 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLL 227
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V + F CG+VVD R D + F +EF E A++AL +
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 443
Query: 291 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 347
G L VR + + A P N + R ++T++ DK + + +++
Sbjct: 444 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 502
Query: 348 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL 386
F CGE R+ + D+ +S A+++F ++S AL
Sbjct: 503 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKAL 546
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R ++ F +G + +R+ EE RT++ + Q++ L F G+V D R+
Sbjct: 130 RSRQPFIKGASPLTNRSDELTPEERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 189
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 190 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 249
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ +K FE G++ ++L+ D S F+ F
Sbjct: 250 G----QTGPMRLYVGSLLFNITEEMLKGIFEPF-GKIENIQLIMDPETGRSKGYGFLTFR 304
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 305 NADDAKKALEQLNGFELAGRPMKV 328
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAAL 386
+Y N + +T +K FE ++ D S FV F AE A+ L
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 387 NCSGVVLG 394
N V G
Sbjct: 253 NGKEVAEG 260
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
+ S G + ++ D ++ FV F E+A +++ +G++L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLL 164
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAALNL 290
TV+V ++ +V +E+L F CG V R+ D + + F F+ F + +GA AL +
Sbjct: 338 TVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEM 397
Query: 291 AGTMLGFYPVRVLP-SKTAIA 310
AG L PVRV SK A A
Sbjct: 398 AGRELCGRPVRVTEFSKQAAA 418
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALN- 289
++YV D+D VT+ QL F QVV R+C D N+ L + ++ +++ E A A+
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 102 LNYSTLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETF 149
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 150 -SGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 203
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGARAALN-LA 291
+YV ++D VT+E+L LF G + C++ DP+ + + F+ F+ A LN +
Sbjct: 325 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 384
Query: 292 GTMLGFYPVRV 302
G M+G P+ V
Sbjct: 385 GKMVGGKPLYV 395
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
T+ N+D K + D+ FF V G+V ++ + D S +A+VEF +S + AL+
Sbjct: 626 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVVKALS 685
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
+G +L + PI++ S+ + RA + H
Sbjct: 686 ANGYMLKNRPIKIQSSQAE-KNRAAKAAKH 714
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
RTV+VS++D TE+ L F CG++ R+ D + +A++EF A AL
Sbjct: 626 RTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRDYAGRSKGYAYVEFEQASAADVALKK 685
Query: 291 AGTMLGFYPV-RVLPSKTAIAPV-NPTFLPRTEDER-----------EMCARTIYCTNID 337
+G PS + P F+ R + R ++ ++ N+D
Sbjct: 686 DRQPIGPSAASEATPSTDDTMTIARPMFVSRCDPNRSKSSGFQYSAGKLEPEKLFVRNLD 745
Query: 338 KKVT-QADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCS-GVVLG 394
K+VT A +LF E G V +R+ + + + A+VEF A+ A AL + G+++G
Sbjct: 746 KRVTAHALEQLFGEH--GTVVSVRIATYRNGAPKGHAYVEFANADQASRALVATDGLLVG 803
Query: 395 SLPIRVSPSKTPVR 408
S I V+ S PVR
Sbjct: 804 SKNIAVAISNPPVR 817
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-GDPNSVLRFAFIEFTDEEGARAALNLAG 292
++V + +V E+++ F CG++ + ++ G+P V AF+ F E+G AA+ G
Sbjct: 9 IFVGQLPSRVNEDEIRTYFEECGEITNVKVLSGNPQRVA--AFVTFATEDGKNAAIAFNG 66
Query: 293 TML-GFYPVRV--LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
G P+R+ SK + PT TI NI V + VK FF
Sbjct: 67 KDFNGNGPLRINAANSKPSDGEGEPT--------------TIVARNIAFSVDETLVKEFF 112
Query: 350 ESVCGEVYRLRLLGDYHHSTRI---AFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
+ CG++ R+ L Y S R+ AFV F E+ A+ +G + I+V S
Sbjct: 113 QG-CGKITRVSLP-TYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMFEGREIQVEKS 167
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 199 NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV 258
NA A K G G R+N+ S E T+ +I V E + F GCG++
Sbjct: 59 NAAIAFNGKDFNGNGPLRINAANSKPSDGEGEPTTIVARNIAFSVDETLVKEFFQGCGKI 118
Query: 259 --VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTML 295
V D + FAF+ F EE A+ LAGTM
Sbjct: 119 TRVSLPTYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMF 157
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
EE RRTV+V+ + ++T +L F G Q+V R+ G V A++EF E
Sbjct: 212 EERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGRSKGV---AYVEFRRE 268
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIY---CT-NID 337
+ + AL L+G + PV V + A N +E R + A + C NI
Sbjct: 269 DSVQVALTLSGKRILGIPVIV---QLTEAEKNRKARELSEQNRALSAELPFHRLCVGNIH 325
Query: 338 KKVTQADVKLFFESVCGEVYRLRLL-GDYHHSTRIAFVEF---VMAESAIAALNCSGVVL 393
+T D+K FE GE+ +RL D + S F++F + A A+ +N G L
Sbjct: 326 FNITDEDLKAIFEPF-GELEYVRLQRDDQNRSKGFGFIQFRDPLCARIALEKMN--GFDL 382
Query: 394 GSLPIRV 400
+RV
Sbjct: 383 AGRQLRV 389
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NS 269
Q ++ + S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L +A++ F D E R A+ L + P++ + + +P+ R+ +
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 330 TIYCTNIDKKVTQADVKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFV---MAESAI 383
I+ N+ + D K ++ SV G++ ++ D + ++ FV F A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 384 AALNCSGVVLGSLPIRVSP 402
ALN G++L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGARAALNLA 291
V++S + +E + +LF CG+++ ++ D N +L + I F+D E + AL L
Sbjct: 4 VFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALALN 63
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
GT LG + V +K P P P C TI+ N+ + + F
Sbjct: 64 GTQLGGRYIDVKEAK-GTQPQKPNVPPPD------CL-TIFVKNLSYDLNADQIGDSFRP 115
Query: 352 VCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAALNCSG 390
CG+V +R++ Y+ ++ A+++F +S I AL +G
Sbjct: 116 -CGKVANVRMV--YNTVSKNFKGFAYIDFEDHQSVIKALQMNG 155
>gi|398017732|ref|XP_003862053.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500281|emb|CBZ35359.1| RNA-binding protein, putative [Leishmania donovani]
Length = 403
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A E + V +S I T QL +F CG + D + AF+ +T EE
Sbjct: 130 ADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEEA 185
Query: 284 ARAALNLAGTMLGFYPVRVLPSKT---AIAPV---------NPTFLPRTEDEREMCARTI 331
AL L G M+ PV V P A AP N + R++ R +
Sbjct: 186 CEKALKLDGAMVNGNPVVVRPCPPRDDAPAPASRRDATRRGNESTTASAPSRRQLDVRVV 245
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGV 391
+ VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 246 V-HGVPSDVTKEALRAFFSPDCGPLTDVFIKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 392 VLGSLPIRV 400
+L +R+
Sbjct: 301 MLMGTRVRI 309
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 16/178 (8%)
Query: 229 IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARA 286
+ ++YV D++ V+E QL +F GQVV R+C D L +A++ + + + A
Sbjct: 21 FVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATR 80
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
AL L L F V P + + +P+ R+ I+ N+DK + +
Sbjct: 81 ALEL----LNFNAVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSIDNKALH 129
Query: 347 LFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
F + G + ++ D S FV+F ESA A+ +G++L + V P
Sbjct: 130 DTF-AAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGP 186
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 105/264 (39%), Gaps = 40/264 (15%)
Query: 135 GDFKRDMRELQ--ELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHN 192
GD + + E Q E+FS++ + V L + + +N A +L N N
Sbjct: 29 GDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRALELLNFN 88
Query: 193 ARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRT----VYVSDIDQQVTEEQL 248
A NG R + R+ IR++ +++ ++D+ + + L
Sbjct: 89 AVNGK--------------------PIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKAL 128
Query: 249 AALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
F G ++ C++ DP+ + + F++F EE A+ A+ ML L K
Sbjct: 129 HDTFAAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGML-------LNDKQ 181
Query: 308 AIAPVNPTFLPRTEDEREMCAR--TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
V P + D+ + ++ +Y N+ T ++K FE+ G + ++ D
Sbjct: 182 VF--VGPFVRRQERDQSGVVSKFNNVYVKNLADSTTDDELKKVFEA-YGPISSAVVMRDN 238
Query: 366 HHSTR-IAFVEFVMAESAIAALNC 388
++ FV F A+ A A+
Sbjct: 239 EGKSKCFGFVNFEHADDAAKAVEA 262
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 22/116 (18%)
Query: 225 QREEIIRR----TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFT 279
+R+E I + +Y+ ++D + +E+L +F G +V C++ DP R + F+ F+
Sbjct: 295 ERKERIEKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFS 354
Query: 280 D-EEGARAALNLAGTMLGFYPVRV----------------LPSKTAIAPVNPTFLP 318
+E RA + G M+G P+ V +T + P PT LP
Sbjct: 355 SPDEATRAVTEMNGKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPVGPAVPTSLP 410
>gi|209877643|ref|XP_002140263.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555869|gb|EEA05914.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 302
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGC-GQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
++++ +I TEE + F +++ P + RF ++F G A+ L
Sbjct: 11 SIFIKNISPLATEESVCKAFEDLKNEILGVSFHVYPGTSQRFCQVDFKTSSGVTNAMGLN 70
Query: 292 GTMLGFYPVRVLPSKTAIAPV-------NPTFLPRTEDER------EMCARTIYCTNIDK 338
G+ L P+ + T IAPV P P++ +R E +RTI NI +
Sbjct: 71 GSTLLGVPMSI----TVIAPVPIKLNMKYPKISPKSTTQRSANILEERLSRTILVENIPE 126
Query: 339 KVTQADVKLFFE---SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA-IAALNCSGVVLG 394
K TQ ++K+FF S+ + R +GD S R +EF E A +VLG
Sbjct: 127 KFTQNELKIFFSNFGSILDISFEQRQIGD--ESLRCT-IEFENKEEANKVRRQNKDIVLG 183
Query: 395 SLPIRVSPSKTPVR 408
+R+S K+ +R
Sbjct: 184 DRVLRISTPKSMIR 197
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 16/204 (7%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
RR + G G R + S +R+ RTV+ + Q+V L F G+V D R+
Sbjct: 231 RRSPNGGAGDRTPPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMI 287
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A+IEF D E AL L+G L P+ V + K + P F P+
Sbjct: 288 TCNKTKRFKGIAYIEFEDPESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPK 347
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ +
Sbjct: 348 S----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDVIQLIMDTETGRSKGYGFITYH 402
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 403 NADDAKKALEQLNGFELAGRPMKV 426
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 297 FYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEV 356
+ P R P+ A PT L + +ER+ ART++C + ++V D++ FF SV G+V
Sbjct: 227 YSPHRRSPNGGAGDRTPPTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKV 281
Query: 357 YRLRLL--GDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+R++ IA++EF ES AL SG L +PI V
Sbjct: 282 RDVRMITCNKTKRFKGIAYIEFEDPESVSLALGLSGQRLLGVPIMV 327
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 291
T+++ ++ + ++Q+ F G+V+ R+ + R F ++F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 292 GTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
G L PVR + + A P + + + +++I+ D + ++ ++
Sbjct: 372 GCDLDGRPVRLDLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESKIRESL 431
Query: 350 E---SVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
E + CGE+ R+ + D S IA+++F S AL SG LG + V +K
Sbjct: 432 EGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYVDEAK 491
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVATDEKANSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +AF AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ Q + E L F G V+ R+C D S L +A++ F A AL+
Sbjct: 3 SLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALDT 62
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ +L P+R++ S+ R R ++ N+DK + + F
Sbjct: 63 MNFDLLRNKPIRIMWSQ------------RDPSLRRSGVGNVFIKNLDKTIDNKAIYDTF 110
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 -SAFGNILSCKVATDEKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D++ VT+ QL LF GQVV R+C D ++ L + ++ +++ A A+
Sbjct: 39 SLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME- 97
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
ML F PV + + +PT R+ + I+ N+DK + + F
Sbjct: 98 ---MLNFTPVNGKSIRVMYSHRDPTL-------RKSGSANIFIKNLDKSIDNKALHDTFS 147
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
S G + ++ D + S FV++ ESA A++
Sbjct: 148 SF-GNILSCKIATDSNGQSKGYGFVQYDNEESAQGAID 184
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D + +E+L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 322 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMN 381
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 382 GKMIVSKPLYV 392
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ +R++ +++ ++D+ + + L F G ++ C+I D N + +
Sbjct: 110 RVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYG 169
Query: 275 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 330
F+++ +EE A+ A++ L G ++ V V FL + E E +
Sbjct: 170 FVQYDNEESAQGAIDKLNGMLMNDKQVYV-----------GHFLRKQERESTTGMTKFQN 218
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y N+ + T ++K F G + ++ D ++ F+ F AE A A+
Sbjct: 219 VYVKNLSESTTDDELKKVFGEF-GNITSAVVMRDADGKSKCFGFINFETAEDAAKAV 274
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA
Sbjct: 57 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 116
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 117 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDGAIDNKALHDTF 164
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D H +++ FV + AE+A +A+ + +G++L
Sbjct: 165 -AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLL 209
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 128 RIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYG 187
Query: 275 FIEFTDEEGARAAL-NLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCART 330
F+ + E A +A+ ++ G +L V V +P K ++ +E +
Sbjct: 188 FVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFTN 238
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
IY NID + T + + FE G++ L D +R FV ++ E A A+
Sbjct: 239 IYVKNIDPEATDDEFRALFEKY-GDITSASLAHDQEGKSRGFGFVNYIRHEDANKAV 294
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D++ VT+ L LF G VV R+C D ++ L + ++ + + + A
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL+ ML F P+ P + + +P+ R I+ N+DK + D
Sbjct: 88 RALD----MLNFTPLNGKPIRIMYSFRDPSI-------RRSGTANIFIKNLDKAI---DN 133
Query: 346 KLFFE--SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
K ++ S G + ++ D S FV+F ESA A + +G++L + V
Sbjct: 134 KALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVG 193
Query: 402 P 402
P
Sbjct: 194 P 194
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D + +++L LF G + C++ DPN + R + F+ F T EE +RA ++
Sbjct: 316 LYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMN 375
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 376 GKMVASKPLYV 386
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D Y +S FV + AE+A A+ + +G++L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLL 211
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G ++ R+C D S L +A++ F A+ L
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 291 AGT-MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N++K + D + F
Sbjct: 63 MNLDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFVKNLEKSI---DNRALF 107
Query: 350 ESVC--GEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ G + +++ D + S FV F ESA A+ +G+VL SL + V
Sbjct: 108 DAFSGFGNILSCKVVSDENGSKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFV 161
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ ++V ++++ + L F G G ++ C++ D N + F
Sbjct: 74 RIMWSQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVVSDENGSKGYGF 133
Query: 276 IEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A A+ + G +L V V F R E E E+ AR
Sbjct: 134 VHFETQESAEKAIEKMNGIVLKSLKVFV-----------GHFKSRKERELELGARAREFT 182
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N + + A + F G ++++ D ++ FV + E A A++
Sbjct: 183 NVYIKNFGEDMDNARLGEIF-GRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVD 240
>gi|125560429|gb|EAZ05877.1| hypothetical protein OsI_28114 [Oryza sativa Indica Group]
Length = 572
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 291
T+++ ++ + ++Q+ F G+V+ R+ + R F ++F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 292 GTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
G L PVR + + A P + + + +++I+ D + ++ ++
Sbjct: 372 GCDLDGRPVRLDLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESKIRESL 431
Query: 350 E---SVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
E + CGE+ R+ + D S IA+++F S AL SG LG + V +K
Sbjct: 432 EGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYVDEAK 491
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D Y +S FV + AE+A A+ + +G++L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLL 211
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D V+E+ L ALF G V C+I +P + +AFIE+++ + A AL
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAATTALTAM 65
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 66 NKRV--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLREAFAP 117
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
GE+ R++ D S AFV FV AE+AI A+N G +GS IR + S
Sbjct: 118 F-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTNWSTRK 174
Query: 407 VRP 409
+ P
Sbjct: 175 LPP 177
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMA 379
D+ E+ +R++Y N+D K T + +F+S CG V R+ +L D H +VEFV
Sbjct: 94 DQEEIDSRSVYVGNVDYKSTHDQILAYFQS-CGTVNRITILSDKTTGHPKGCCYVEFVNK 152
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKT--PVRPRAPRLP 415
ES I A+ + ++++P +T P R LP
Sbjct: 153 ESIINAMALNDSFFNERQLKITPKRTNLPYYMRQGVLP 190
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV-----VDCRICGDPNSVLRFAFIEF 278
+EEI R+VYV ++D + T +Q+ A F CG V + + G P ++EF
Sbjct: 93 TDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGC---CYVEF 149
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
++E A+ L + +++ P +T +
Sbjct: 150 VNKESIINAMALNDSFFNERQLKITPKRTNL 180
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D Y +S FV + AE+A A+ + +G++L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLL 211
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEGARAAL 288
+YV +++Q VT+E+ +LF G++ + D N + F F+ F+D E A AA+
Sbjct: 241 IYVKNVEQDVTDEEFRSLFEKYGEITSATLSRD-NETGKSRGFGFVNFSDHEAASAAV 297
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 279
++ E ++VYV ++D T E++ F GCG V + C R G P FA++EFT
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKG---FAYVEFT 127
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKT 307
++EG + AL + ++L ++V P +T
Sbjct: 128 EKEGMQNALAMTDSLLRGRQIKVDPKRT 155
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E A+++Y N+D T +++ F CG V R+ + D H A+VEF
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHG-CGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
E AL + +L I+V P +T
Sbjct: 129 KEGMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ L A F G V + +I D S ++EF +E+
Sbjct: 175 DERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNEDSV 234
Query: 285 RAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIYCTN 335
AL L G L P+ V ++ T +P +P +Y N
Sbjct: 235 TQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTSAHPNSIP---------FHRLYVGN 285
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVL 393
I VT+ D++ FE GE+ ++L D + +R FV++ A A AL +G L
Sbjct: 286 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDL 344
Query: 394 GSLPIRV 400
PIRV
Sbjct: 345 AGRPIRV 351
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFV 377
TEDER+ RT++ + ++ D+K FFE V G V +++ D S + +VEF
Sbjct: 173 TEDERDR--RTVFVQQLAARLRTRDLKAFFEKV-GPVTEAQIVKDRISQRSKGVGYVEFK 229
Query: 378 MAESAIAALNCSGVVLGSLPIRV 400
+S AL +G L +PI V
Sbjct: 230 NEDSVTQALQLTGQKLLGIPIIV 252
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 284
Q EE + +YVS++ Q+ + QL +F G++ + R+ + FA+I+F EE A
Sbjct: 692 QHEE--KTKIYVSNLSPQMQKRQLRHIFSEFGKIREIRLQN--RKTMAFAYIDFEKEEDA 747
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
+L + ++ + K +A +PT + ++ + +Y +N+ +T+ D
Sbjct: 748 IKSLKMNQAVIE----KTGDRKIGVAISDPT------KKMQIDHKKLYVSNLSHTMTEDD 797
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 403
++ F S GE+ LR++ + +++ IAFVE+ + A A+ +G ++ I VS S
Sbjct: 798 LQELF-SKFGEISALRVVRMPNGNSKGIAFVEYNQEDHAKEAMTLNGTMVDGRLIVVSVS 856
Query: 404 KTPVR 408
+R
Sbjct: 857 DPNLR 861
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D Y +S FV + AE+A A+ + +G++L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLL 211
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
T+ N+D K + D+ FF V G+V ++ + D S +A+VEF ES I AL+
Sbjct: 156 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKALS 215
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
+G +L + PI+V S+ + RA + H
Sbjct: 216 VNGYMLKNRPIKVQSSQAE-KNRAAKATKH 244
>gi|399217969|emb|CCF74856.1| unnamed protein product [Babesia microti strain RI]
Length = 385
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN-LAG 292
V+V +I T ++L A+F CG++V C + RFAFIE+ E A ALN L G
Sbjct: 175 VFVGNIPLDTTVDELKAVFEKCGELVKCDM------RKRFAFIEYHKPESASDALNQLNG 228
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESV 352
+L ++V P + + R + NI++ + D+K F +
Sbjct: 229 YILHGEKIKVKPHSDNSN----RYREKVPPPRHKPGYAVTVANIEETTSWQDLKDFGR-L 283
Query: 353 CGEV-YRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
GEV Y ++ D + +E++ ESA AL
Sbjct: 284 AGEVSYASIVIKD---GKKYGVIEYLAPESAKNAL 315
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 118
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A++ T G Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 119 RAID---TFNG-YQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 165
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR--IAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F G + + +L D + T +AFV + A+ AIAALN G+ P+ V
Sbjct: 166 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSV 224
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+Q+ + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIEKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N ++ +K FFE G++ +++ ++ +AF AE+A+ A
Sbjct: 184 NVYVKNFTEEFDDEKLKDFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q + E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F +R P + + +P+ R ++ N+D+++ + F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRQIDNKAIYDTF- 110
Query: 351 SVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
S G + ++ L + +S FV F E+A ++ +G++L + V
Sbjct: 111 SAFGNILSCKVALDEKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYV 162
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 118
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A++ T G Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 119 RAID---TFNG-YQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 165
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR--IAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F G + + +L D + T +AFV + A+ AIAALN G+ P+ V
Sbjct: 166 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSV 224
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V +E L F G + D R+ D NS + F+ F TD E A A +
Sbjct: 109 VFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 289 NLAGTMLGFYPVRV---------LPSKT----------AIAPVN----PTFLPRTEDERE 325
N G LG +RV PS T A AP+N P +
Sbjct: 169 N--GEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTP 226
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE-SAIA 384
T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E +A+A
Sbjct: 227 AYNTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEHAAMA 281
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
+ G ++ PI+ S K AP
Sbjct: 282 IVQLQGQMVHGRPIKCSWGKDRADGTAP 309
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 79/198 (39%), Gaps = 32/198 (16%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN---SVLRFAFIEFTDEEGARAA 287
R +YV ++ +VTE L +F G V +I D N L + F+E+ D A A
Sbjct: 15 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 74
Query: 288 L-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L L G + +R VN + + E ++ ++ +V +
Sbjct: 75 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLG 124
Query: 347 LFFESVCGEVYRLRLLGDYHHSTR-----IAFVEFVMAESAIAALNCSGVVLGSLPIRV- 400
F S G + R++ D + +AF + AE AIA +N G LGS IRV
Sbjct: 125 KAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRVN 181
Query: 401 --------SPSKT-PVRP 409
PS T P RP
Sbjct: 182 WANQKTQGGPSPTMPGRP 199
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ +R E R++YV ++D T E+L A F GCG V + C + G P FA++
Sbjct: 33 SIEERMETDARSIYVGNVDYGATAEELEAHFHGCGSVNYVTILCDKFSGHPKG---FAYM 89
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLP 304
+F+D+E R +L L ++ ++V+P
Sbjct: 90 KFSDKESVRTSLALDESLFRGRQIKVIP 117
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ L A F G V + +I D S ++EF +E+
Sbjct: 175 DERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEFKNEDSV 234
Query: 285 RAALNLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRTEDEREMCARTIYCTN 335
AL L G L P+ V ++ T +P +P +Y N
Sbjct: 235 TQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTAAHPNSIP---------FHRLYVGN 285
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
I VT+ D++ FE GE+ ++L D + +R FV++ A A AL +G L
Sbjct: 286 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDL 344
Query: 394 GSLPIRV 400
PIRV
Sbjct: 345 AGRPIRV 351
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
TEDER+ RT++ + ++ D+K FFE V G V +++ D S + +VEF
Sbjct: 173 TEDERDR--RTVFVQQLAARLRTRDLKAFFEKV-GPVTEAQIVKDRISQRSKGVGYVEFK 229
Query: 378 MAESAIAALNCSGVVLGSLPIRV 400
+S AL +G L +PI V
Sbjct: 230 NEDSVTQALQLTGQKLLGIPIIV 252
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 7/179 (3%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEG 283
+EE RTV++ + +QVT + F GQV D R+ D NS ++EFTD
Sbjct: 178 QEERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVRDVRLISDRNSRRSKGIGYVEFTDASA 237
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQA 343
A+ L+G L P+ V P+ +A N + + +Y ++ +T+
Sbjct: 238 VTLAIKLSGQKLLGVPIMVSPT---MAEKNRYAAAQAALVKPQGPMKLYVGSLHYNITEP 294
Query: 344 DVKLFFESV-CGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ FE E +L+ + + S FV F A +A A+ +G L P++V
Sbjct: 295 MLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQMNGFELAGRPMKV 353
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+++ER+ +RT++ + K+VT D++ FF V G+V +RL+ D + S I +VEF
Sbjct: 177 SQEERD--SRTVFIMQLAKQVTIRDIQDFFSKV-GQVRDVRLISDRNSRRSKGIGYVEFT 233
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPS 403
A + A+ SG L +PI VSP+
Sbjct: 234 DASAVTLAIKLSGQKLLGVPIMVSPT 259
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 118
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A++ T G Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 119 RAID---TFNG-YQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 165
Query: 346 KLFFESVCGEVYRLRLLGDYHHST--RIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F G + + +L D + T +AFV + A+ AIAALN G+ P+ V
Sbjct: 166 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSV 224
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+YV ++D VTEE L ALF G+V C+I +P + +AF+EFT+ A AL
Sbjct: 8 KTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGND-PYAFLEFTNHASAATALAAM 66
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ + + + A +P N P+T+ I+ ++ ++ ++ F
Sbjct: 67 NRRV--FLEKEMKVNWATSPGN---QPKTDTSNH---HHIFVGDLSPEIETHILREAFAP 118
Query: 352 VCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRVS----- 401
GE+ R++ D S AFV FV AE+AI A+N G LGS IR +
Sbjct: 119 F-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRTNWSTRK 175
Query: 402 -PSKTP 406
P+K P
Sbjct: 176 PPTKGP 181
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D+DQ V + QL LF GQVV R+C D + L + ++ F++ + A
Sbjct: 31 QFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAA 90
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL++ L F P+ + + +P+ R+ I+ N+DK + +
Sbjct: 91 RALDV----LNFTPLNNRSIRIMYSHRDPSL-------RKSGTANIFIKNLDKAIDHKAL 139
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
F S G + ++ D ++ FV+F E+A A++
Sbjct: 140 HDTFSSF-GLILSCKIATDASGLSKGYGFVQFDNEEAAQNAID 181
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D +++E+L +F G + C++ DP + R + F+ F T EE RA +
Sbjct: 319 LYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMN 378
Query: 292 GTMLGFYPVRV 302
G M P+ V
Sbjct: 379 GKMFAGKPLYV 389
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R + R+ +R++ +++ ++D+ + + L F G ++ C+I D + + + +
Sbjct: 107 RIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYG 166
Query: 275 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART--- 330
F++F +EE A+ A++ L G ++ V V FL R +D ++T
Sbjct: 167 FVQFDNEEAAQNAIDKLNGMLINDKQVYV-----------GHFL-RKQDRENALSKTKFN 214
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y N+ + T ++ + F G + ++ D +R FV F + A A+
Sbjct: 215 NVYVKNLSESTTDEELMINFGEY-GTITSALIMRDADGKSRCFGFVNFENPDDAAKAV 271
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ Q VT+ QL +F G V + RIC D + L +A++ + + A AL+
Sbjct: 9 SLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAERALDT 68
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ R++ S+ R R+ I+ N+DK V D K F
Sbjct: 69 LNNTLVKGKACRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSV---DHKALF 113
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAA-LNCSGVVLGSLPIRVSPSKT 405
+ S G + +++ D + ++ FV + +SA A + +G+++ + V P K+
Sbjct: 114 DTFSAFGNILSCKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKS 173
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 34/181 (18%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDC-----RICGDPNSVLRFAFIEFTDEEGARAA 287
T+YV +DQ+VT+E L LF CG V++ +I G+ + F+E+ EE A A
Sbjct: 13 TLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQG---YGFVEYKTEEDADYA 69
Query: 288 LNLAGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQAD 344
+ + ++ Y P++V + ++D+R + I+ N+D VT+
Sbjct: 70 IKIL-HLIKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDPSVTEMQ 114
Query: 345 VKLFFESVCGEVYRLRLL--GDYHHSTRIAFVE---FVMAESAIAALNCSGVVLGSLPIR 399
++ F S G + R++ D + S AF+ F +++AI+A+N G GS I
Sbjct: 115 LQETF-STFGLIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAISAMN--GQYYGSQKIS 171
Query: 400 V 400
V
Sbjct: 172 V 172
>gi|115433970|ref|NP_001041743.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|52076599|dbj|BAD45501.1| nuclear protein -like [Oryza sativa Japonica Group]
gi|113531274|dbj|BAF03657.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|125568671|gb|EAZ10186.1| hypothetical protein OsJ_00013 [Oryza sativa Japonica Group]
gi|215712245|dbj|BAG94372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768572|dbj|BAH00801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
T + +++++ V +S++ +T + + LF CG+VVDC I A++E++
Sbjct: 347 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTIT----DSKHIAYVEYSK 402
Query: 281 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 313
+E A AAL L +G P+ V LP KT +A N
Sbjct: 403 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 440
>gi|125524053|gb|EAY72167.1| hypothetical protein OsI_00016 [Oryza sativa Indica Group]
Length = 920
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
T + +++++ V +S++ +T + + LF CG+VVDC I A++E++
Sbjct: 289 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTIT----DSKHIAYVEYSK 344
Query: 281 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 313
+E A AAL L +G P+ V LP KT +A N
Sbjct: 345 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 382
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V + F CG+VVD R D + F +EF E A++AL +
Sbjct: 364 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 423
Query: 291 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 347
G L VR + + A P N + R +T++ DK + + +++
Sbjct: 424 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQS-QTVFVRGFDKNLGEDEIRAK 482
Query: 348 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL 386
F CGE R+ + D+ +S A+++F ++S AL
Sbjct: 483 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKAL 526
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V + F CG+VVD R D + F +EF E A++AL +
Sbjct: 376 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 435
Query: 291 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL- 347
G L VR + + A P N + R +T++ DK + + +++
Sbjct: 436 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQS-QTVFVRGFDKNLGEDEIRAK 494
Query: 348 ---FFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL 386
F CGE R+ + D+ +S A+++F ++S AL
Sbjct: 495 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKAL 538
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 120 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 179
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 180 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 239
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 240 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 294
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 295 NADDAKKALEQLNGFELAGRPMKV 318
>gi|156086682|ref|XP_001610750.1| polyadenylate binding protein [Babesia bovis T2Bo]
gi|154798003|gb|EDO07182.1| polyadenylate binding protein, putative [Babesia bovis]
Length = 585
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV ++ +VTE L +F G G V R+C D L +A++ + + + A AAL
Sbjct: 37 SLYVGNLLPEVTEAMLYEVFNGIGPVASIRVCRDSLTRKSLGYAYVNYYNFQDAEAALEC 96
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + ++ P++ + +P+ R+ I+ N+DK + D K ++
Sbjct: 97 ----LNYIEIKGQPARIMWSERDPSL-------RKSGTGNIFVKNLDKAI---DTKALYD 142
Query: 351 SVC--GEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+ G + ++ D +S FV + ESA A+ +G+++G+ + V+P
Sbjct: 143 TFSHFGTILSCKVAIDSLGNSKGYGFVHYTTEESAKEAIEKVNGMLIGNSQVSVAP 198
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 37/196 (18%)
Query: 233 TVYVSDIDQQVTEEQLAALF------VGCGQVVDCRICGDPNSVLRFAFIEFTDE-EGAR 285
T++V D+ VT+ L F V +VV R+ G + F++F DE E R
Sbjct: 158 TIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTG---RTKGYGFVKFGDESEQIR 214
Query: 286 AALNLAGTMLGFYPVRVLP------------SKTAIAPVNPTFLPRTEDEREMCARTIYC 333
A + G P+R+ P SKT+ NP P T++E + TI+
Sbjct: 215 AMTEMNGVHCSSRPMRIGPAANKNTSGSQQFSKTSYQ--NP---PGTQNENDPNNTTIFV 269
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALNCSG 390
N+D VT ++ F S GE+ +++ R FV+F AE A+ LN G
Sbjct: 270 GNLDSNVTDEHLRQVF-SQYGELVHVKIPA----GKRCGFVQFSDRSCAEEALRILN--G 322
Query: 391 VVLGSLPIRVSPSKTP 406
+G IR+S ++P
Sbjct: 323 TPIGGQNIRLSWGRSP 338
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 215 RRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 271
RRM + + E E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 211 RRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 270
Query: 272 R--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRTEDEREMCA 328
++EF D A+ L+G +L PV V PS+ V T
Sbjct: 271 SKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVD 330
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
R +Y N+ +T+ ++ FE+ E+ +L L + H FV+F E A AA +
Sbjct: 331 RKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS 390
Query: 388 CSGVV-LGSLPIRVS 401
+G + + I+VS
Sbjct: 391 LNGKLEIAGRTIKVS 405
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 315 TFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIA 372
T P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S +
Sbjct: 219 TTEPEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVG 275
Query: 373 FVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
+VEF A S A+ SG +L P+ V PS+
Sbjct: 276 YVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 307
>gi|406606068|emb|CCH42541.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 787
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF-TDEEGARAALN 289
T+YV D+DQ+VTE+ L++LF + ++C P + L + ++ F +D + RA +
Sbjct: 136 TLYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTDANRATED 195
Query: 290 LAGTMLGFYPVRVLP 304
L T++ +R++P
Sbjct: 196 LNYTLVANKEIRIMP 210
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 35/194 (18%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G VVD +I D S ++EF +EE
Sbjct: 216 DERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEFKEEESV 275
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------- 330
+ A+ L G L P+ IA + TE E+ AR
Sbjct: 276 QKAIALTGQKLLGIPI--------IAQL-------TEAEKNRQARNTEGTATQSNGIPFH 320
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFVMAESAIAALN- 387
+Y NI +T+ D+K FE GE+ ++L + S FV+F+ A AL
Sbjct: 321 RLYVGNIHFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQFIDPTQAKEALEK 379
Query: 388 CSGVVLGSLPIRVS 401
+G L PIRV
Sbjct: 380 MNGFELAGRPIRVG 393
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 8/195 (4%)
Query: 215 RRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 271
RRM + + E E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 211 RRMKEKKGTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 270
Query: 272 R--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRTEDEREMCA 328
++EF D A+ L+G +L PV V PS+ V T
Sbjct: 271 SKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVD 330
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
R +Y N+ +T+ ++ FE+ E+ +L L + H FV+F E A AA +
Sbjct: 331 RKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS 390
Query: 388 CSGVV-LGSLPIRVS 401
+G + + I+VS
Sbjct: 391 LNGKLEIAGRTIKVS 405
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 315 TFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIA 372
T P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S +
Sbjct: 219 TTEPEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVG 275
Query: 373 FVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
+VEF A S A+ SG +L P+ V PS+
Sbjct: 276 YVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 307
>gi|365986410|ref|XP_003670037.1| hypothetical protein NDAI_0D04810 [Naumovozyma dairenensis CBS 421]
gi|343768806|emb|CCD24794.1| hypothetical protein NDAI_0D04810 [Naumovozyma dairenensis CBS 421]
Length = 626
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 186 LIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEII--RRTVYVSDIDQQV 243
L+ N+ ++ N NA+ ++ Q + NS S + E I +++++V + Q+
Sbjct: 229 LLSKNNEGQDSNSNASPSISSTIVDTQNDYKNNSNLSQGEEEMITIDKKSIFVGQLPQET 288
Query: 244 TEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAAL 288
T+E L F G+++D + P +V FAFI++ E+ A AAL
Sbjct: 289 TKEDLETHFWKHGKILDLNLIHKPTNV--FAFIQYESEKSAAAAL 331
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEF 278
T + + ++ + +YV I Q TE+++ + F CG + VDC++ + + AFI F
Sbjct: 152 TDNKEEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKVDCKMRPEDGAFSGIAFITF 211
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER----EMCA--RTIY 332
E+GA+ AL +G R L + + P F+PR + EM +Y
Sbjct: 212 ETEDGAKRALAFDRAAMGD---RFLTIQQYVKTTTP-FVPRRKTSSGFAPEMVDGYNRVY 267
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVV 392
N+ T+ D++ F RL + A V+F + S AL V
Sbjct: 268 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVAIALKLDQQV 327
Query: 393 LGSLPIRV 400
+ P++V
Sbjct: 328 ICGRPVKV 335
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 236 VSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNLAGT 293
V+ + Q +TE+ L A+F+ G + CR+ D F F+ FT EE A A+ T
Sbjct: 65 VNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIE---T 121
Query: 294 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 353
G Y +R K + A P ED +E +Y TN+ + +T+ ++ F
Sbjct: 122 FNG-YQLRNKRLKVSYA------RPSGEDIKET---NLYVTNLPRAITEDQLETIFGKY- 170
Query: 354 GEVYRLRLLGDYHHST--RIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
G + + +L D + T +AFV F A+ AIAALN GS P+ V
Sbjct: 171 GRIVQKHILRDKSNGTPRGVAFVRFDKREEAQEAIAALNNVIPEGGSEPLCV 222
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAAL 288
+ + V+ + Q +T+E+L +LF G++ C++ D L + F+ + D + A A+
Sbjct: 118 KTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAI 177
Query: 289 N-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
N L G L ++V PS +I N +Y + + K +TQ +
Sbjct: 178 NTLNGLRLQTKTIKVSYARPSSASIRDAN-----------------LYVSGLPKTMTQKE 220
Query: 345 VKLFFESVCGEVYRLRLLGDYHH--STRIAFVEF---VMAESAIAALNCSGVVLGSLPIR 399
++ F S G + R+L D S + F+ F V AE AI LNC + PI
Sbjct: 221 LEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPIT 279
Query: 400 VSPSKTP 406
V + P
Sbjct: 280 VKFANNP 286
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 286
R+V+V ++D E+L A F GCG + + C R G P FA+IEF D+E ARA
Sbjct: 64 RSVFVGNVDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKG---FAYIEFADKESARA 120
Query: 287 ALNLAGTMLGFYPVRVLPSKT 307
+L + T+ ++V+ +T
Sbjct: 121 SLAMTDTLFRGRQIKVVEKRT 141
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 313 NPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR- 370
+PT P T DE+ E +R+++ N+D +++ F CG + R+ +L D +S R
Sbjct: 47 SPTPPPLTSDEKVEADSRSVFVGNVDYGAAAEELEAHFHG-CGAINRITILCD-RYSGRP 104
Query: 371 --IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ESA A+L + + I+V +T
Sbjct: 105 KGFAYIEFADKESARASLAMTDTLFRGRQIKVVEKRT 141
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 286
R++YV ++D T E+L A F GCG V + C + G P FA+IEF+D+E R
Sbjct: 7 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 63
Query: 287 ALNLAGTMLGFYPVRVLPSKT 307
+L L ++ ++V+P +T
Sbjct: 64 SLALDESLFRGRQIKVIPKRT 84
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 24/179 (13%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
+ ++YV D+D VTE L +F V RIC D + L +A++ + A A
Sbjct: 10 VSASLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+ L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRSRPCRIMWCLRDPA-------SRRNNEGNVFVKNLDKSI---DNKT 115
Query: 348 FFE--SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAES---AIAALNCSGVVLGSLPIRV 400
F+ S+ G + ++ D +S F+ F ES AIA LN G++LG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDSEGNSLGYGFIHFEHPESAKEAIARLN--GMILGDRPIYV 172
>gi|15128444|dbj|BAB62628.1| P0402A09.11 [Oryza sativa Japonica Group]
gi|20804433|dbj|BAB92130.1| P0455C04.5 [Oryza sativa Japonica Group]
Length = 990
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD 280
T + +++++ V +S++ +T + + LF CG+VVDC I A++E++
Sbjct: 359 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTIT----DSKHIAYVEYSK 414
Query: 281 EEGARAALNLAGTMLGFYPVRV-----LPSKTAIAPVN 313
+E A AAL L +G P+ V LP KT +A N
Sbjct: 415 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 452
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ VTE L +F G V R+C D SV R +A++ + + A+ AL
Sbjct: 28 SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAQEAL 85
Query: 289 -NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
NL + +P R++ S R R A I+ N+DK + D K
Sbjct: 86 ENLNYIEIKGHPTRIMWSN------------RDPSLRRSGAGNIFVKNLDKSI---DTKS 130
Query: 348 FFESVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+++ G + ++ D S R FV + ESA A+ +G+++G + V+P
Sbjct: 131 LYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAP 189
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +AF AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q V E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F VR P + + +P+ R ++ N+DK + + F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 121 RARPPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLI 180
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 181 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 240
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 241 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 295
Query: 378 MAESAIAAL-NCSGVVLGSLPIRVS 401
A+ A AL +G L P++V
Sbjct: 296 NADDAKKALEQLNGFELAGRPMKVG 320
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ ++L A F G Q+V R+ G V ++EF +E
Sbjct: 187 DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKNE 243
Query: 282 EGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 339
E AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 244 ESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAT--SSNPNQIPFHRLYVGNIHFS 301
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLP 397
+T++D++ FE GE+ ++L + +R FV+F A AL +G L P
Sbjct: 302 ITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPSQAREALEKMNGFDLAGRP 360
Query: 398 IRV 400
IRV
Sbjct: 361 IRV 363
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 194 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 253
Query: 289 NLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
L+G +L PV V PS K + R +Y N+ +T++ +
Sbjct: 254 ALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQL 313
Query: 346 KLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVV-LGSLPIRVS 401
+ FE EV +L L + H FV+F E A AA + +G + + I+VS
Sbjct: 314 REIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVS 371
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + ++E
Sbjct: 186 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 242
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
F A S A+ SG +L P+ V PS+
Sbjct: 243 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 272
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 120 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 179
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 180 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 239
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 240 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPXTGRSKGYGFLTFR 294
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 295 NADDAKKALEQLNGFELAGRPMKV 318
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
T+ N+D K + D+ FF V G+V ++ + D S +A+VEF ES I AL
Sbjct: 148 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKALA 207
Query: 388 CSGVVLGSLPIRVSPSKTPVRPRAPRLPMH 417
+G +L + PI+V S+ + RA + H
Sbjct: 208 ANGYMLKNRPIKVQSSQAE-KNRAAKASKH 236
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 41/202 (20%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 289
RT++V + Q+VTE+ + F G+V D R+ D S A++EF +E +A+
Sbjct: 186 RTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEAIPSAMR 245
Query: 290 LAGTMLGFYPVRVLPSK----------------------------TAIAPVNPTFLPRTE 321
LAG L YPV + PS+ + +P P
Sbjct: 246 LAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEWSGGGDTSPNSNP--- 302
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMA 379
+ +Y +I +++ D++ FE GEV L+L D S FV++
Sbjct: 303 ----LTFTKLYVGSIHFSISEDDLRTIFEPF-GEVISLQLHKDPETGRSRGFGFVQYKNH 357
Query: 380 ESAIAAL-NCSGVVLGSLPIRV 400
E A A +G+ L P++V
Sbjct: 358 EDAKKAFEQLNGLDLAGRPLKV 379
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 323 EREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR--IAFVEFVMAE 380
ER++ RTI+ + +KVT+ DV FF S G+V +R++ D A+VEF E
Sbjct: 182 ERDL--RTIFVWQLAQKVTEKDVYNFF-SAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKE 238
Query: 381 SAIAALNCSGVVLGSLPIRVSPSK 404
+ +A+ +G L P+ + PS+
Sbjct: 239 AIPSAMRLAGQQLCGYPVAIKPSE 262
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D Y +S FV + AE+A A+ + +G++L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLL 211
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 14/207 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIR--RTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 262
R ++ G RR++ +T + E R RT++V I Q+ L + F G VV+ +
Sbjct: 151 RDRRRNGADDRRLSRKTPEPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQ 210
Query: 263 ICGD--PNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR 319
I D ++EF +EE AL L G L P+ L P+
Sbjct: 211 IVKDRVTGRSKGVGYVEFKEEESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGA 270
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR---IAFVEF 376
+Y NI VT+ D++ FE GE+ ++ L D + R FV+F
Sbjct: 271 APGANGAPFHRLYVGNIHFSVTEKDLQEIFEP-YGELEQVILQRDELNPGRSKGYGFVQF 329
Query: 377 V---MAESAIAALNCSGVVLGSLPIRV 400
V A+ A+A +N G L IRV
Sbjct: 330 VDPTHAKDALAEMN--GFELAGRQIRV 354
>gi|395324233|gb|EJF56678.1| RNA-binding protein Prp24 [Dichomitus squalens LYAD-421 SS1]
Length = 1028
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 289
+ T+YV++ ++ ++ + LF G++ D R S RF +++FT A AL
Sbjct: 690 KSTLYVTNFPEKADDKFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALE 749
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L GT L K ++ NP D + R +Y + K VT+ D++ F
Sbjct: 750 LNGTELE------ESHKMSVFISNPERRKERTDS-DADDREVYVAGLSKLVTKEDLENLF 802
Query: 350 ESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
++ G V +R+ L D S AFVEF A AAL + L + V+ + + VR
Sbjct: 803 KT-YGTVKDVRMILDDKGRSKGFAFVEFETENDARAALAANNHELKQRRMAVTLADSRVR 861
Query: 409 PR 410
+
Sbjct: 862 AK 863
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 27/163 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TV+V+++ VTE++L LF CG + + +I PNS++ A +EF D E AAL
Sbjct: 618 TVFVAEMPAGVTEDELRTLFKDCGSIREIKITQLPNSLV--ATVEFMDRESVPAALTKDK 675
Query: 293 TMLGFYPVRV-LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ V V L K+ T+Y TN +K ++ F
Sbjct: 676 KRIRGQEVAVHLAWKS----------------------TLYVTNFPEKADDKFIRTLF-G 712
Query: 352 VCGEVYRLRLLGDYHHST-RIAFVEFVMAESAIAALNCSGVVL 393
GE++ +R ST R +V+F +A AL +G L
Sbjct: 713 KYGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALELNGTEL 755
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D+D VT+ QL +F GQVV R+C D ++ L + ++ +++ + A
Sbjct: 8 QFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 67
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 68 RALDV----LNFTPLNNKPIRIMYSHRDPSI-------RKSGMANIFIKNLDKGIDHKAL 116
Query: 346 KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
F S G + ++ D S FV+F E+A A++
Sbjct: 117 HDTFSSF-GNILSCKVATDASGQSKGYGFVQFDSEEAAQNAID 158
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 188 FNNHNARNGNVNANAAVRRKKSFGQ----GKRRMNSRTSLAQR---EEIIRRTV------ 234
F N + + A A+ KK G+ GK + S L + E+ ++ TV
Sbjct: 235 FVNFESADDAAKAVEALNGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGL 294
Query: 235 --YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNL 290
Y+ ++D + +E+L LF G + C++ DP+ + R + F+ F T EE +RA +
Sbjct: 295 NLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEM 354
Query: 291 AGTMLGFYPVRV 302
G ML P+ V
Sbjct: 355 NGKMLISKPLYV 366
>gi|414875768|tpg|DAA52899.1| TPA: hypothetical protein ZEAMMB73_898845 [Zea mays]
Length = 34
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 28/30 (93%)
Query: 385 ALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 414
ALNCSG++LG+LP+RVSPSKTPV+PR R+
Sbjct: 2 ALNCSGMILGTLPVRVSPSKTPVKPRVNRV 31
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D++ V + QL LF GQVV R+C D + L + ++ FT+ + A
Sbjct: 28 QFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAA 87
Query: 286 AALNLAGTMLGFYP-----VRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
AL++ L F P +RV+ S R R+ I+ N+DK +
Sbjct: 88 RALDV----LNFTPMNNKSIRVMYSH------------RDPSSRKSGTANIFIKNLDKTI 131
Query: 341 TQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN 387
+ F S G++ ++ D S FV+F +SA A++
Sbjct: 132 DHKALHDTFSSF-GQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAID 178
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D +T+E+L +F G + +I DPN V R + F+ F T EE +RA +
Sbjct: 317 LYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMN 376
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 377 GKMIVSKPLYV 387
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGAR 285
+ R + V+ + Q +TE+ L A+FV G + CR+ D F F+ FT EE A
Sbjct: 13 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAA 72
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
A++ T G Y +R K + A P +D +E +Y TN+ + +T +
Sbjct: 73 RAID---TFNG-YQLRNKRLKVSYA------RPSGDDIKET---NLYVTNLPRAITDDQL 119
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR--IAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F G + + +L D + T +AFV + A+ AIAALN G+ P+ V
Sbjct: 120 ETIFGKY-GRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSV 178
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 73 SLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 129
Query: 277 EFTDEEGARAALNLAGTML 295
EF+D+E R +L L ++
Sbjct: 130 EFSDKESVRTSLALDESLF 148
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 79/196 (40%), Gaps = 38/196 (19%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA 284
+E RRTV+V + ++ ++L F G V +I D N ++EF EE
Sbjct: 205 DERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSEESL 264
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------- 330
AAL L G L PV V P TE E+ RT
Sbjct: 265 PAALQLTGQKLAGIPVIVQP---------------TEAEKNRQVRTTENSNANGAQQNSV 309
Query: 331 ----IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAA 385
+Y NI +T+ D++ F GE+ ++L + + +R FVE+ +A A
Sbjct: 310 LFHRLYVGNIHFSITEPDLRTVF-GPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREA 368
Query: 386 L-NCSGVVLGSLPIRV 400
L +G L PIRV
Sbjct: 369 LEKMNGFDLAGRPIRV 384
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
TEDER+ RT++ + ++ ++ FFE G V +++ D + S + +VEF
Sbjct: 203 TEDERDR--RTVFVQQLAARLRTKELHEFFEQ-AGPVAAAQIVKDRVSNRSKGVGYVEFK 259
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES AAL +G L +P+ V P++
Sbjct: 260 SEESLPAALQLTGQKLAGIPVIVQPTE 286
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 211 GQGKRRMNSRTSLAQ--REEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRI 263
G ++R+ S+T Q +E RRTV+V + ++ ++L F G Q+V R+
Sbjct: 146 GSPRKRVKSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRV 205
Query: 264 CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTE 321
G V ++EF +EE A+ + G L P+ ++ ++ NP T
Sbjct: 206 SGRSKGV---GYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPE--ASTS 260
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAE 380
+ +Y NI +T+ D++ FE GE+ ++L D +R FV+F
Sbjct: 261 HHNSVPFHRLYVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPN 319
Query: 381 SAIAALN-CSGVVLGSLPIRV 400
A AL +G L PIRV
Sbjct: 320 QAREALEKMNGFDLAGRPIRV 340
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +AF AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ Q V E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ +L P+R++ S+ R R ++ N+D+ + + F
Sbjct: 63 MNFDLLRNKPIRIMWSQ------------RDPSLRRSGVGNVFIKNLDRAIDNKAIYDTF 110
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 -SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 9/175 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGA-RAALNLA 291
+Y+ ++ + TEE L F G V + DP + R FAF+ F D E A RA L
Sbjct: 191 IYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEAAHRATEELN 250
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI--YCTNIDKKVTQADV-KLF 348
G LG V V + +FL + +ER + I Y N+D V ++ KLF
Sbjct: 251 GRKLGDKEVYV--GRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDEELHKLF 308
Query: 349 FESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
G++ +++ D ++R FV + E A A++ +G ++ + PI V+
Sbjct: 309 SALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGKMVANKPIYVA 363
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D++ VTE L +F G V R+C D + L +A++ F + A AL+
Sbjct: 11 SLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERALDT 70
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S +P+ R+ I+ N+DK + D K +
Sbjct: 71 LNYTLIKGRPCRIMWSHR-----DPSI-------RKSGQGNIFIKNLDKSI---DNKALY 115
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+ S G + +++ D +++ FV + +E+A +A+
Sbjct: 116 DTFSAFGNILSCKVVTDGKGNSKGYGFVHYETSEAADSAI 155
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++YV D+ VTE L +F G V R+C D SV R +A++ + + A AAL
Sbjct: 28 SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 289 -NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
+L + +P R++ S R R A I+ N+DK + D K
Sbjct: 86 ESLNYIEIKGHPTRIMWSN------------RDPSLRRSGAGNIFVKNLDKSI---DTKS 130
Query: 348 FFESVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
+++ G + ++ D S R FV + ESA A+ +G+++G + V+P
Sbjct: 131 LYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAP 189
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E+ R++YV ++D T E+L F GCG + + C R G P FA+I
Sbjct: 90 SIEEKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
EF D + + A+ + ++ ++V+P +T ++ T P
Sbjct: 147 EFGDRDSVQTAMAMDESLFRGRQIKVMPKRTNRPGISTTNRP 188
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + A F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 134 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 193
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 194 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEDD 244
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 245 IKSVFEAFGPILYCKLAQGSSVHTHKGYGFIEYANKQAMDEAIASMNL--FDLGGQLLRV 302
Query: 401 SPSKTP 406
S TP
Sbjct: 303 GRSITP 308
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T +ER+M RT++C + +++ D++ FF +V G+V +RL+ D S IA+VEF+
Sbjct: 190 TPEERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFL 246
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES A+ +G L +PI V P++
Sbjct: 247 DVESVPLAMGLNGQKLFGIPIVVQPTQ 273
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+ + Q++ L F G+V D R+ D N R A++EF D E
Sbjct: 192 EERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFLDVES 250
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
A+ L G L P+ V P++ A N + T + +Y ++ +
Sbjct: 251 VPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQRGNVGPMRLYVGSLHFNI 310
Query: 341 TQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLP 397
T+ +K FE G++ ++ L+ D + S F+ F +E A AL +G L P
Sbjct: 311 TEDMLKGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRP 369
Query: 398 IRV 400
++V
Sbjct: 370 MKV 372
>gi|342180044|emb|CCC89520.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 407
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGT 293
V V + VTE+QL LF G G++VD + +P R+AF+ F + E AL L+G
Sbjct: 111 VAVRHLPDDVTEDQLRELFRGVGEIVDFFL--EPRR--RYAFVGFENSESVDVALKLSGK 166
Query: 294 MLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVC 353
+ + V +T + + + NI T+ V+ FF SV
Sbjct: 167 EMNGVAIEVERKRTG-------------NRENILESKVVVKNIPYGATEESVRRFFASV- 212
Query: 354 GEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
GE + + H + AFV F +S +AA++ +G +++
Sbjct: 213 GEPVDIFI----HDKKQFAFVGFADEKSCLAAIDMNGFDFDGQRVQIE 256
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV------VDCRICGDPNSVLRFAFIEFT 279
REE+ +R+VY+ +D T E+L F CGQ+ VD + G P FA++EF
Sbjct: 55 REEVDKRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVD-KYSGHPKG---FAYVEFA 110
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFL 317
DE+ + +L L G++ ++V+ +T + P FL
Sbjct: 111 DEQSVQNSLLLNGSLFRGRQLKVMQKRTNV----PGFL 144
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 122 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 181
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 182 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 241
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 242 GQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 296
Query: 378 MAESAIAAL-NCSGVVLGSLPIRVS 401
A+ A AL +G L P++V
Sbjct: 297 NADDAKKALEQLNGFELAGRPMKVG 321
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 122 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 181
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 182 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 241
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 242 GQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 296
Query: 378 MAESAIAAL-NCSGVVLGSLPIRVS 401
A+ A AL +G L P++V
Sbjct: 297 NADDAKKALEQLNGFELAGRPMKVG 321
>gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]
Length = 610
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 11/183 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNL 290
+T++ ++ Q+ + F G+VVD R+ D S + IEF E A+ AL +
Sbjct: 358 KTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEM 417
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
G +L VR+ + P N + E + +RTIY + + ++K
Sbjct: 418 NGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQ---SRTIYVRGFSSSLGEDEIKKELR 474
Query: 351 S---VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
S CGEV R+ + D F + AL SG +G I V S
Sbjct: 475 SHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEES---- 530
Query: 408 RPR 410
RPR
Sbjct: 531 RPR 533
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 277
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 73 SASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 132
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
F ++EG + ALNL + L ++V P +T +
Sbjct: 133 FLEQEGVQEALNLNESELHGRQIKVAPKRTNV 164
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 77 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 135
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E ALN + L I+V+P +T V + R PR
Sbjct: 136 QEGVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPR 173
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 272
++ S +++EI +R++YV ++D T E+L F GCG V + C + G P
Sbjct: 54 TTQLSEQEKKEIDQRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFSGHPKG--- 110
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
FA+IEF D++ A+ + ++ ++VL +T + ++ T
Sbjct: 111 FAYIEFADKDSVETAMAMDDSLFRGRQIKVLQKRTNMPGISTT 153
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGA-RAALNL 290
++Y D+D +VTE L LF VV R+C D N L +A+I F++ A RA L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFERPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 351 SVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
+ G + ++ D S FV+F ESA AA++
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAID 194
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D++ VTE QL F G VV R+C D L +A++ F A A++
Sbjct: 33 SLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDV 92
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L ++ P+RVL S+ R R I+ N+DK + D K
Sbjct: 93 LNFQVINGKPIRVLYSQ------------RDPAVRRSGVGNIFIKNLDKAI---DNKALL 137
Query: 350 ESVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
++ G + ++ D +++ FV+F AE+A AA+ N +G+ L + V P
Sbjct: 138 DTFAQFGTITSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGP 194
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD-EEGA 284
E++ +Y+ ++++ +E+L LF G + CR+ D + R AF+ F+ +E
Sbjct: 308 EKMAGANLYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEAT 367
Query: 285 RAALNLAGTMLGFYPVRV 302
RA + G M+G P+ V
Sbjct: 368 RAVTEMNGKMVGAKPLYV 385
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 146 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 205
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 206 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 265
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 266 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 320
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 321 NADDAKKALEQLNGFELAGRPMKV 344
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN-L 290
+YV D+ + V EE L F G V R+C D + LR+ ++ + A AL+ L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+++ P+RV+ S R D R I+ N++ V A ++ F
Sbjct: 104 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLNNSVDNASLQELF- 150
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVS 401
S G+V ++ + ++R FV+F ESA A+ N +G + + V+
Sbjct: 151 SKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVA 203
>gi|255554000|ref|XP_002518040.1| conserved hypothetical protein [Ricinus communis]
gi|223542636|gb|EEF44173.1| conserved hypothetical protein [Ricinus communis]
Length = 946
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A +E+ +++T+ VS++ +T +QL LF G VV+C I + FA+IE++ E
Sbjct: 342 AGKEDTLKKTLQVSNLSPLLTVDQLKQLFSYFGSVVECSITDSKH----FAYIEYSKPEE 397
Query: 284 ARAALNLAGTMLGFYPVRV-----LPSKTAI-APVNPTFLP 318
A AAL L +G P+ V LP K+ + + V + LP
Sbjct: 398 ATAALALNNMDVGGRPLNVEMAKSLPQKSLLNSSVASSSLP 438
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +AF AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q V E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F VR P + + +P+ R ++ N+D+ + + F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRAIDNKAIYDTF- 110
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 261 CRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLP 318
C+ N + + ++EF E+ AR + +G +P+ + K + P P
Sbjct: 914 CKPIEKRNFSVGYCYVEFDREDAAREVIQKLINEIG-WPLDCELEDVKFQVTPSIPMINK 972
Query: 319 RTEDEREM------------CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 366
+E R++ +RT+Y TN+ K T+ ++ FF CG V +++ D
Sbjct: 973 TSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRM 1032
Query: 367 HSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 413
+R FVEF +A+ AL S +VL I VS S + +P+
Sbjct: 1033 GKSRGYGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSPK 1080
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 215 RRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFV-GCGQVVDCRICGDPNSVLR- 272
R++ + ++ RTVY++++ + TE++L++ F CG V +IC D R
Sbjct: 978 RKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRMGKSRG 1037
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNP 314
+ F+EF DE A AL L+ +L + V S AI +P
Sbjct: 1038 YGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSP 1079
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D+E R A+ L ++ ++V+ +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVVAKRT 175
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HS 368
PV P + E++ E AR+IY N+D T +++ F CG V R+ +L D + H
Sbjct: 81 PVGPVIM-SIEEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHP 138
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ES A+ + I+V +T
Sbjct: 139 KGFAYIEFADKESVRTAMALDESLFRGRQIKVVAKRT 175
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGA-RAALNL 290
++Y D+D +VTE L LF VV R+C D N L +A+I F++ A RA L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
S G + ++ D ++ FV+F ESA AA++
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAID 194
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 208
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 18/173 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN-L 290
+YV D+ + V EE L F G V R+C D + LR+ ++ + A AL+ L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+++ P+RV+ S R D R I+ N+ V A ++ F
Sbjct: 183 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLSSSVDNASLQELF- 229
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVS 401
S G+V ++ + ++R FV+F ESA A+ N +G + + V+
Sbjct: 230 SKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVA 282
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + R EE RTV+ + Q++ L F G+V D R+
Sbjct: 134 RARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 193
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 194 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 253
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 254 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 308
Query: 378 MAESAIAAL-NCSGVVLGSLPIRVS 401
A+ A AL +G L P++V
Sbjct: 309 NADDAKKALEQLNGFELAGRPMKVG 333
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 208
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFAFIEFTDEEGARAALN 289
R T+YV++ + + + LF G++ D R S RF ++++T A AL
Sbjct: 710 RSTLYVTNFPEDADDTFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALE 769
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L GT + + ++ NP D + R IY + K VT+ D++ F
Sbjct: 770 LNGTDME------EGRRLSVYISNPERRKERTDS-DANEREIYIAGLSKLVTKEDLETLF 822
Query: 350 ESVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVR 408
++ G V +R+ L D S AF+EF A AAL + L + V+ + + V+
Sbjct: 823 KTY-GNVKDVRMILDDKGKSKGFAFIEFTTEPEARAALAANNHELKKRRMAVTLADSRVK 881
Query: 409 PR 410
P+
Sbjct: 882 PK 883
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 182 ANNSLIFNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQ 241
A N+L N + G RR + R RT E R +Y++ + +
Sbjct: 764 AENALELNGTDMEEG--------RRLSVYISNPERRKERTDSDANE----REIYIAGLSK 811
Query: 242 QVTEEQLAALFVGCGQVVDCR-ICGDPNSVLRFAFIEFTDEEGARAAL 288
VT+E L LF G V D R I D FAFIEFT E ARAAL
Sbjct: 812 LVTKEDLETLFKTYGNVKDVRMILDDKGKSKGFAFIEFTTEPEARAAL 859
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
TV+V D+ V +E+L ALF CG + + +I PNS++ A +EF + + AAL
Sbjct: 638 TVFVGDLPAGVEDEELRALFKDCGVIREVKITQLPNSLV--ATVEFLERDSVPAALTKDK 695
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-TIYCTNIDKKVTQADVKLFFES 351
RV + A+ + R T+Y TN + ++ F
Sbjct: 696 K-------RVRGKEIAV---------------HLAWRSTLYVTNFPEDADDTFIRTLF-G 732
Query: 352 VCGEVYRLRLLGDYHHST-RIAFVEFVMAESAIAALNCSGV 391
GE++ +R ST R +V++ SA AL +G
Sbjct: 733 KYGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALELNGT 773
>gi|391331494|ref|XP_003740180.1| PREDICTED: probable RNA-binding protein 46-like [Metaseiulus
occidentalis]
Length = 357
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 203 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALF-VGCGQVVDC 261
+ R + G+ + S L R E+ RR +YV++I + T+E + F G +VD
Sbjct: 128 SARWGSALGKSEALRKSTEGLIVRTEMGRR-LYVANIPKVKTKEDIFNHFNRFLGGLVDV 186
Query: 262 RICGDPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
+ P S F FIEF + A A T++ P + + +P P
Sbjct: 187 MVYTYPGSTQNRGFCFIEFNSSKNAMFAKE---TIVASRP---WGCEVVVDWADPEQEP- 239
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV-- 377
++E + +Y N+ +VT AD++ F +V R++++ D+ AFV F
Sbjct: 240 -DEEIMKSVKVLYIKNLSPRVTDADLRRAFAERGLQVERVKVIRDF------AFVHFFTR 292
Query: 378 -MAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
+AE A+ C + L LP++VS +K P+
Sbjct: 293 SLAEKAMKV--CQNLTLDDLPLQVSWAKPPI 321
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF- 278
+ AQ+ ++YV ++D VTE L LF GQV R+C D + L +A++ +
Sbjct: 37 TTAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYN 96
Query: 279 TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDK 338
+ E+G +A L T++ P R++ S+ +P R+ ++ N+D
Sbjct: 97 SSEDGEKALEELNYTVIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDH 144
Query: 339 KVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVL 393
+ + F + G + ++ D H +++ FV + AE+A A+ + +G++L
Sbjct: 145 AIDNKALHDTF-AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLL 200
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGA-RAALNL 290
++Y D+D +VTE L LF VV R+C D N L +A+I F++ A RA L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 351 SVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
+ G + ++ D S FV+F ESA AA++
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAID 194
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGA-RAALNL 290
++Y D+D +VTE L LF VV R+C D N L +A+I F++ A RA L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 351 SVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
+ G + ++ D S FV+F ESA AA++
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAID 194
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 208
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D+E R A+ L ++ ++V+ +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVVAKRT 175
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HS 368
PV P + E++ E AR+IY N+D T +++ F CG V R+ +L D + H
Sbjct: 81 PVGPVIM-SFEEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHP 138
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ES A+ + I+V +T
Sbjct: 139 KGFAYIEFADKESVRTAMALDESLFRGRQIKVVAKRT 175
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG----DPNSVLRFAFIEFTDEEGARAAL 288
T+YV ++DQ+VT+ L +F GQVV +I + + + F+EF D A A+
Sbjct: 19 TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAI 78
Query: 289 -NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER---EMCARTIYCTNIDKKVTQAD 344
++ G + Y +R ++ + A +NP ED + + D+K+ QA
Sbjct: 79 QDMNGRKIFNYEIRANWAQPS-ANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQA- 136
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR 399
F V L G +AF + AE AIA +N G LG+ PIR
Sbjct: 137 FSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMN--GEWLGTRPIR 189
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 15/190 (7%)
Query: 207 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 266
+ ++ Q +N + + + V+V D+ ++ +E+LA F G + + + D
Sbjct: 92 RANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWD 151
Query: 267 PNSVLR--FAFIEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDE 323
P S F F+ F D+ A RA + G LG P+R + P P +
Sbjct: 152 PLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQKGQTAMPAPQPGQQLP 211
Query: 324 REMCAR-------TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF 376
E+ + +IY NI V+Q D+ F+ G V ++ D AFV+
Sbjct: 212 YEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQRF-GYVQEVKFQAD----RGFAFVKM 266
Query: 377 VMAESAIAAL 386
E+A A+
Sbjct: 267 DTHENAANAI 276
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQDESGTSKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML RV K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDKVNGML-LNGKRVFVGK---------FIPRKEREKELGEKAKRFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG-DYHHSTRIAFVEFV---MAESAIAA 385
+Y N + + ++ FE G + +++ D S FV F AE A+A+
Sbjct: 193 NVYVKNFGEDFSDDLLREMFEKY-GRITSHKVMSKDDGKSKGFGFVAFEDPEAAEKAVAS 251
Query: 386 LNCSGVVLG 394
LN +V G
Sbjct: 252 LNGKEIVEG 260
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALD- 70
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ + P++ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 71 ---TMNYDPLKGKPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKAMYD 117
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVL 393
S G + ++ D +++ FV F E+A +++ +G++L
Sbjct: 118 TFSTFGNILSCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGMLL 164
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 132 NGGGDFKRDMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNH 191
N G DF D+ L+E+F K + V ++K + + G GF A F +
Sbjct: 198 NFGEDFSDDL--LREMFEKYGRITSHKV---MSKDDGKSKGF-----GFVA-----FEDP 242
Query: 192 NARN---GNVNANAAVRRKKSF-GQGKRRMNSRTSLAQREEIIRR---------TVYVSD 238
A ++N V K F G+ +++ + L ++ E ++ +YV +
Sbjct: 243 EAAEKAVASLNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERLSRYQGVNLYVKN 302
Query: 239 IDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGF 297
ID + +E+L F G + ++ + F F+ F+ EE +A + G ++G
Sbjct: 303 IDDNIDDERLRKEFTPFGTITSAKVMLEDGRSKGFGFVCFSSAEEATKAVTEMNGRIVGS 362
Query: 298 YPVRV 302
P+ V
Sbjct: 363 KPLYV 367
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 207
>gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana]
gi|122225307|sp|Q1PEP5.1|NUCL2_ARATH RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2;
Short=AtNUC-L2; AltName: Full=Protein PARALLEL LIKE 1;
Short=AtPARLL1
gi|91806437|gb|ABE65946.1| nucleolin [Arabidopsis thaliana]
gi|332642601|gb|AEE76122.1| nucleolin [Arabidopsis thaliana]
Length = 636
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 11/183 (6%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNL 290
+T++ ++ Q+ + F G+VVD R+ D S + IEF E A+ AL +
Sbjct: 384 KTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEM 443
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
G +L VR+ + P N + E + +RTIY + + ++K
Sbjct: 444 NGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQ---SRTIYVRGFSSSLGEDEIKKELR 500
Query: 351 S---VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
S CGEV R+ + D F + AL SG +G I V S
Sbjct: 501 SHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEES---- 556
Query: 408 RPR 410
RPR
Sbjct: 557 RPR 559
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDC-----RICGDPNSVLRFAFIEFTDEEGAR 285
RR++YV ++D T ++L F CG V R G P FA+IEF+D E R
Sbjct: 36 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 92
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
A+ L T+ ++V P +T I + T
Sbjct: 93 TAMALDETLFRGRVIKVSPKRTNIPGFSTT 122
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 310 APVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRL-----RLLG 363
+P F T +ER + R+IY N+D T +++++F S CG V R+ R G
Sbjct: 17 SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNS-CGHVNRVTIPYNRFTG 75
Query: 364 DYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
H A++EF ES A+ + I+VSP +T +
Sbjct: 76 ---HPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNI 116
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGTSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +A+ AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q + E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F +R P + + +P+ R ++ N+DK + + F
Sbjct: 62 ---TMNFDLIRDKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 SAFGNILSCKVATDEKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 28/171 (16%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGA 284
E+I + + V+ + Q +T++++ +LF CG+V+ C++ D NS L +AF+++ D A
Sbjct: 3 EKIDQSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHHSLGYAFVKYEDVADA 62
Query: 285 RAAL-NLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
A+ +L G L ++V PS AI N +Y + +
Sbjct: 63 NKAISSLNGLRLQSKVIKVSYARPSSAAIKNAN-----------------LYVSGLPLHY 105
Query: 341 TQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVM---AESAIAALN 387
T D+ F G + ++L D + +R + FV + AE+AI ALN
Sbjct: 106 THQDLDNLFGQY-GAIITSKVLYDGNGVSRGVGFVRYDKRNEAEAAILALN 155
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D S ++EF +EE
Sbjct: 173 DERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRISQRSKGVGYVEFKNEESV 232
Query: 285 RAALNLAGTMLGFYPVRVLPSKT----------AIAPVNPTFLPRTEDEREMCARTIYCT 334
AL L G L PV V ++ A P +P +P +Y
Sbjct: 233 TQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGP-HPNSIP---------FHRLYVG 282
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVV 392
NI VT+ D++ FE GE+ ++L D + +R FV+F A A AL +G
Sbjct: 283 NIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFD 341
Query: 393 LGSLPIRV 400
L PIRV
Sbjct: 342 LAGRPIRV 349
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D S ++EF +EE
Sbjct: 173 DERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRISQRSKGVGYVEFKNEESV 232
Query: 285 RAALNLAGTMLGFYPVRVLPSKT----------AIAPVNPTFLPRTEDEREMCARTIYCT 334
AL L G L PV V ++ A P +P +P +Y
Sbjct: 233 TQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGP-HPNSIP---------FHRLYVG 282
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVV 392
NI VT+ D++ FE GE+ ++L D + +R FV+F A A AL +G
Sbjct: 283 NIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFD 341
Query: 393 LGSLPIRV 400
L PIRV
Sbjct: 342 LAGRPIRV 349
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ +L F G V + +I D S ++EF +EE
Sbjct: 173 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEESV 232
Query: 285 RAALNLAGTMLGFYPVRVLPSKT----------AIAPVNPTFLPRTEDEREMCARTIYCT 334
AL L G L PV V ++ A P +P +P +Y
Sbjct: 233 TQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGP-HPNSIP---------FHRLYVG 282
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVV 392
NI VT+ D++ FE GE+ ++L D + +R FV+F A A AL +G
Sbjct: 283 NIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFD 341
Query: 393 LGSLPIRV 400
L PIRV
Sbjct: 342 LAGRPIRV 349
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 291
TV++S++ + +E+ + + G + D R+ D + F F+EF+ ++ ARA L
Sbjct: 603 TVFLSNLAYETSEQDVRNMMSSSGTITDIRLVLDYKQRCKGFCFVEFSSQDEARAVLKRD 662
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
++ PV + PS+ A +P F ++ E+ + ++ + T+ D++ F+
Sbjct: 663 RELMKGRPVFMSPSEPDAALKHPAFKYQSTLEK----KKLFIKGLALSTTKEDLEALFKK 718
Query: 352 VCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSPSKTPVR 408
G + +RL+ + S + +A+VEF SA ALN G + V+ S P R
Sbjct: 719 F-GILKDVRLVTFRNGSPKGLAYVEFEDEVSATMALNQTDGTTFQDKVLTVALSNPPPR 776
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 301 RVLPSKTAIAPVN-PTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRL 359
+V P A P + P +P+ + A T++ +N+ + ++ DV+ S G + +
Sbjct: 573 KVEPKVNATEPASKPVVIPKPVTDPSRHANTVFLSNLAYETSEQDVRNMMSS-SGTITDI 631
Query: 360 RLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
RL+ DY + FVEF + A A L ++ P+ +SPS+
Sbjct: 632 RLVLDYKQRCKGFCFVEFSSQDEARAVLKRDRELMKGRPVFMSPSE 677
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNL 290
T+Y+ ++DQ+VT++ + LF+ CG VV+ I D S + F+EF EE A A+ +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKI 79
Query: 291 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKL 347
M+ Y P++V + ++D+R + ++ N+D T+ D K
Sbjct: 80 M-HMIKLYGKPIKVNKA--------------SQDKRTQEVGANLFIGNLD---TEIDEKT 121
Query: 348 FFE--SVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRV 400
+E S G + +++ + S FV + ES+ AL +G LG+ IRV
Sbjct: 122 LYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRV 179
>gi|303286577|ref|XP_003062578.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456095|gb|EEH53397.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 222 SLAQREEIIRRTVYVSDI----DQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIE 277
S A +E I RTV+V I + ++TE +A F G VV R+ R A++E
Sbjct: 2 SRASDQEKISRTVHVGGIRGLDNGEITERDVAEFFSQQGPVVAVRVHA------RSAWVE 55
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTI 331
F D+ AALNL G G + +RV SKTAI L RT + AR +
Sbjct: 56 FADDASTMAALNLDGVTTGGHNLRVNRSKTAIN--TNALLERTREASIAAARAV 107
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 323 EREMCARTIYCTNI----DKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVM 378
++E +RT++ I + ++T+ DV FF S G V +R+ H+ R A+VEF
Sbjct: 6 DQEKISRTVHVGGIRGLDNGEITERDVAEFF-SQQGPVVAVRV-----HA-RSAWVEFAD 58
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV 407
S +AALN GV G +RV+ SKT +
Sbjct: 59 DASTMAALNLDGVTTGGHNLRVNRSKTAI 87
>gi|190345448|gb|EDK37333.2| hypothetical protein PGUG_01431 [Meyerozyma guilliermondii ATCC
6260]
Length = 886
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 22/196 (11%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--------VDCRICGDPNSVLRFA 274
+ R++++ R V V ++D TE +L +F G++ D R G N +A
Sbjct: 680 IETRKQVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLPIKKDMRNKGHVNG--GYA 737
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
F+ F E A ALN G ++ V V ++ ++ NP+ +D+ RTI T
Sbjct: 738 FVTFKTEPSALNALNADGELIRNRKVHVYKAQPQVSIYNPS---DYDDQ-----RTITIT 789
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLG 394
V Q ++ F G V + L H T A +EF +E+ +AL +
Sbjct: 790 GFPDSVRQEQLEAFMAEHFGTVSKSFL----DHETGSAVIEFSDSETTKSALQIESTIFD 845
Query: 395 SLPIRVSPSKTPVRPR 410
+RV P + P+
Sbjct: 846 GNTLRVGPKSSFRNPQ 861
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 209 SFGQGKRRMNSR-TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-D 266
+ + K+ +N + +++Q E I ++VS+ ++ ++ ALF CGQ+V R
Sbjct: 572 ALTKDKKAINGQHIAVSQLREAI---IWVSNFPPSFSQSEVKALFEDCGQIVSARFPSLK 628
Query: 267 PNSVLRFAFIEFTDEEGARAALNLA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDERE 325
RF ++EFT E A AA+ GT L + K +A P + E ++
Sbjct: 629 SGRERRFCYLEFTKPESAAAAVKKHNGTKLS-DKISGDSFKLVVAISRPP--KKIETRKQ 685
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL------LGDYHHSTRIAFVEFVMA 379
+ R + N+D T+++++ FE GE+ + L H + AFV F
Sbjct: 686 VMHRQVCVKNLDYYTTESELRTVFEK-HGELEEISLPIKKDMRNKGHVNGGYAFVTFKTE 744
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
SA+ ALN G ++ + + V ++ V P
Sbjct: 745 PSALNALNADGELIRNRKVHVYKAQPQVSIYNP 777
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 208 KSFGQGKR-----RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 262
K FG+ R R NS EE RTV+V + Q++ L F G+V D R
Sbjct: 135 KPFGRRNRSPLGLRSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVR 194
Query: 263 --ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFL 317
+C A+IEF D E AL L+G L P+ V + K + P +
Sbjct: 195 LIVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLM 254
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P+ +Y ++ +T+ ++ FE G++ ++L+ D S F+
Sbjct: 255 PKN----MTGPMRLYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIA 309
Query: 376 FVMAESAIAAL-NCSGVVLGSLPIRV 400
F E A AL +G L P++V
Sbjct: 310 FRNCEDAKKALEQLNGFELAGRPMKV 335
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGE--VYRLRL 361
PS + AP++ P E + AR+++ + + ++T D+ FFE GE V R+
Sbjct: 243 PSPSYEAPLDDMLNPDEPREDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRI 302
Query: 362 LGDY--HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
+ D S I +VEF E AL SG V+ LPI++
Sbjct: 303 VTDRISRRSKGIGYVEFRSVELVDKALGLSGTVVMGLPIQI 343
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 232 RTVYVSDIDQQVTEEQLAALF---VGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARA 286
R+V+VS + ++T L F +G G V+D RI D S ++EF E
Sbjct: 268 RSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGYVEFRSVELVDK 327
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNP-----TFLPRTEDEREMCARTIYCTNIDKKVT 341
AL L+GT++ P+++ ++ ++P P +Y ++ +T
Sbjct: 328 ALGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGV--SAPHGGMQLYVGSLHFNLT 385
Query: 342 QADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPI 398
++D+K FE GE+ + L D S AFV++ AE A AL G L +
Sbjct: 386 ESDIKQVFEPF-GELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQMEGFELAGRTL 444
Query: 399 RV 400
RV
Sbjct: 445 RV 446
>gi|307206655|gb|EFN84627.1| Nucleolysin TIAR [Harpegnathos saltator]
Length = 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 31/164 (18%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
EE RT+YV ++D V+E+ L ALF G V C+I +P + +AF+EFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCA-- 59
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNP-TFLP---RTEDEREMCARTIYCTNIDKKVTQ 342
TA+A +N +FL + ++ T+YC +T
Sbjct: 60 -------------------ATALAAMNKRSFLDKEMKVYNQSSPTNCTVYCGGFTNGITD 100
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
+K F S G + +R+ + + AF++F E+A A+
Sbjct: 101 ELIKKTF-SPFGTIQDIRVFKEKGY----AFIKFTTKEAATHAI 139
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E RRTV+V + ++ L A F G V + +I D S ++EF +EE
Sbjct: 180 DERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEESV 239
Query: 285 RAALNLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
AL L G L P+ +V S+TA +P +P +Y
Sbjct: 240 TQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATG-AHPNSIP---------FHRLYV 289
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGV 391
NI VT+ D++ FE GE+ ++L D + +R FV++ A A AL +G
Sbjct: 290 GNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGF 348
Query: 392 VLGSLPIRV 400
L PIRV
Sbjct: 349 DLAGRPIRV 357
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKREVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+RE+ R+IY N+D T +++ F CG V R+ +L + H
Sbjct: 85 SPLNMSL----EDKREVDNRSIYVGNVDYGATAEELEQHFHG-CGSVNRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT-----PVRPRAPR 413
A++EF +S A+ + I+V P +T V R PR
Sbjct: 140 PKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|403339762|gb|EJY69142.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1016
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NL 290
TVYV + Q E++L F G + R+ +PN L+ F +I+F ++ + A+ +L
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKSK------------KEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNCS---------GVVLGSLPIRV 400
GEV R+ L D HS F+EF+ S A+ G+++ SL +V
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEFLDEASMNKAIEKKEITDLGRRIGIIMKSLR-QV 902
Query: 401 SPSKTPVRPRA 411
+ KT R
Sbjct: 903 TQPKTSFSDRG 913
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 42/227 (18%)
Query: 205 RRKKSFGQGKRRMN-------SRTSLAQREEIIR---RTVYVSDIDQQVTEEQLAALF-- 252
R K+ F + K R N + L + ++ +R +T+Y+ ++++ EE + ALF
Sbjct: 610 RPKREFQESKERPNKQQEKEKDQADLEEHKQKVRSQKKTLYLEQLNEETEEEDITALFIR 669
Query: 253 -VGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-----NLAGTMLGFYPVRVLPS 305
V +++D R+ D R FAF++ +E A +L NL G+ML + +
Sbjct: 670 VVADVKILDIRLIRDEQGKKRGFAFVDVESQEMAEKSLLLNNYNLKGSMLKIHIYK---- 725
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
P N E E T+Y + + + ++ F+ + G++ ++RL+ +
Sbjct: 726 -----PPN---------ESEKSDFTVYVHGLPQTCNEQKLREHFKEI-GDIEQVRLIRNP 770
Query: 366 HHSTR-IAFVEFVMAES---AIAALNCSGVVLGSLPIRVSPSKTPVR 408
+ + + +++F+ +S AI +LN S + ++ + + SK R
Sbjct: 771 NGTLKGFGYIQFLSKKSVQVAIESLNKSKIDNRTISVERNKSKKEAR 817
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 286
R++YV ++D T ++L F GCG V + C R G P FA+IEF+D + ++
Sbjct: 60 RSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVQS 116
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
A+ L T+ ++V+P +T + ++ T
Sbjct: 117 AIGLHETLFRGRVLKVMPKRTNMPGISTT 145
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 92 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 148
Query: 277 EFTDEEGARAALNLAGTML 295
EF+D+E R A+ L ++
Sbjct: 149 EFSDKESVRTAMALDESLF 167
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HS 368
P P + E++ E AR+IY N+D T +++ F CG V R+ +L D H
Sbjct: 85 PAGPVIM-SIEEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFTGHP 142
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ES A+ + I+V +T
Sbjct: 143 KGFAYIEFSDKESVRTAMALDESLFRGRQIKVGVKRT 179
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 121 RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 180
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 181 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 233
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
NID+ VT+ + + FE GE+ L D +R FV F ESA AA++
Sbjct: 234 IKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 202
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNLA 291
+YV ++D VTE L LF G V R+C D + L +A++ F D R A+
Sbjct: 42 LYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAIE-- 99
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
L + P++ P + + +P+ R+ + ++ N+ + + F S
Sbjct: 100 --KLNYTPIKGRPCRIMWSQRDPSL-------RKKGSGNVFIKNLHPAIDNKALHDTF-S 149
Query: 352 VCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVLGSLPIRVSP 402
V G + ++ D +R FV F E+A A++ +G++L L + V+P
Sbjct: 150 VFGNILSCKIATDETGKSRKFGFVHFEEEEAAKEAIDAINGMLLNGLEVYVAP 202
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 23/250 (9%)
Query: 164 AKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAV---RRKKSFGQGKRRMNSR 220
+K N HG GF GF + F H A +N + RK G K R
Sbjct: 128 SKVVYNEHGSRGF--GF-----VHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKRE 180
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFT 279
L R + +YV ++ V E++L LF G + ++ D N R F F+ F
Sbjct: 181 AELGARA-LGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFE 239
Query: 280 DEEGARAALN------LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RTEDEREMCARTIY 332
E A+ A++ ++G +L Y R + + F + E + +Y
Sbjct: 240 KHEEAQKAVDHMNGKEVSGQLL--YVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLY 297
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGV 391
N+D + +K F S G + +++ + HS FV F E A A+ +G
Sbjct: 298 VKNLDDSINDERLKEVF-STYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 392 VLGSLPIRVS 401
++G+ P+ V+
Sbjct: 357 IVGTKPLYVA 366
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L +F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD- 70
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F ++ P + + +P R+ I+ N++ + D K ++
Sbjct: 71 ---TMNFEVIKGQPIRIMWSHRDPGL-------RKSGMGNIFIKNLENSI---DNKALYD 117
Query: 351 --SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
S G + +++ + H S FV F E+A A+N +G++L
Sbjct: 118 TFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLL 163
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNV- 198
D + LQ+LFS+ M S+ ++N GF F N F H V
Sbjct: 203 DEQRLQDLFSQFGNMQ------SVKVMRDSNGQSRGFG---FVN----FEKHEEAQKAVD 249
Query: 199 --NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQQVTEEQ 247
N + G+ ++R ++ L +R E +++ +YV ++D + +E+
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 248 LAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPVRV 302
L +F G + ++ + + F F+ F+ EE +A + G ++G P+ V
Sbjct: 310 LKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 207
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 291
TV+VS++D TEE++ ++ R+ D + F ++ + EE AL L
Sbjct: 679 TVFVSNLDYTATEEEVREALKPIWPIISFRMVKDFKGRSKGFCYVSLSSEEAVNEALKLD 738
Query: 292 GTMLGFYPV---RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
T + P+ R P KT+ P+ F +TE E+ ++ + T+ D++
Sbjct: 739 RTRINGRPMFISRCDPDKTSRGPI---FKYKTELEK----NKLFVKGLSPTTTKEDLENI 791
Query: 349 FESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALNCS-GVVLGSLPIRVSPSKT 405
F V G + +R++ Y HS +A+VEF A AL + G+ + I V+ S+
Sbjct: 792 F-RVHGSLKDVRIVT-YRNGHSKGLAYVEFDDENCAAKALVATDGMTIADKVINVAISQP 849
Query: 406 PVRPRAP 412
P R P
Sbjct: 850 PQRKHLP 856
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEG 283
EE+ R +YV +I + VT ++L+A+F G VV + D S RF F+ T EE
Sbjct: 64 EELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEV 123
Query: 284 ARAALNLAGTMLGFYPVRV------LPSKTAIAPVN-PTFLPRTEDEREMCARTIYCTNI 336
A A +L T +G ++V LP+ A AP + P+F+ D + +Y N+
Sbjct: 124 AAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFV----DSQ----YKVYVGNL 175
Query: 337 DKKVTQADVKLFFESVCGEV 356
KKVT +K FF S GEV
Sbjct: 176 AKKVTTEVLKNFF-SEKGEV 194
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFT 279
R E R+VYV ++D T E+L F GCG V + C + G P FA+IEF+
Sbjct: 4 DRAEADARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 60
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKT 307
D+E + A+ L ++ ++V P +T
Sbjct: 61 DKESVKTAMALDDSLFRGRQIKVSPKRT 88
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
TED E AR++Y N+D T +++ F CG V R+ +L D H A++EF
Sbjct: 2 TEDRAEADARSVYVGNVDYAATAEELEQHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFS 60
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSKT 405
ES A+ + I+VSP +T
Sbjct: 61 DKESVKTAMALDDSLFRGRQIKVSPKRT 88
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 187
Query: 277 EFTDEEGARAALNLAGTML 295
EF+D+E R +L L ++
Sbjct: 188 EFSDKESVRTSLALDESLF 206
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 208
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SFEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D+E R A+ L ++ ++V+ +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVVAKRT 175
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HS 368
PV P + E++ E AR+IY N+D T +++ F CG V R+ +L D + H
Sbjct: 81 PVGPVIM-SFEEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHP 138
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ES A+ + I+V +T
Sbjct: 139 KGFAYIEFADKESVRTAMALDESLFRGRQIKVVAKRT 175
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
N + R K GK S SL + +YV ++D VTE+ L F G++V
Sbjct: 164 NGSTVRDKQIYVGKFIRKSERSLPDLDAKFT-NLYVKNLDPVVTEKHLGEKFSSFGKIVS 222
Query: 261 CRICGDPNSVLR-FAFIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
I D N + F F+ + + AR A+ + G+ G + V ++ +
Sbjct: 223 LAIKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHL 282
Query: 319 RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFV 377
E + IY NID V +++ F S CGEV +++ D +++ FV F
Sbjct: 283 FVEKGLKHMGSNIYVKNIDTSVGDEELRDHF-SACGEVLSAKVMRDDKGTSKGFGFVCFS 341
Query: 378 MAESAIAALNC 388
A +++C
Sbjct: 342 TVVEAFKSMSC 352
>gi|403333973|gb|EJY66125.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1017
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-NL 290
TVYV + Q E++L F G + R+ +PN L+ F +I+F ++ + A+ +L
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKSK------------KEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNCS---------GVVLGSLPIRV 400
GEV R+ L D HS F+EF+ S A+ G+++ SL +V
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEFLDEASMNKAIEKKEITDLGRRIGIIMKSLR-QV 902
Query: 401 SPSKTPVRPRA 411
+ KT R
Sbjct: 903 TQPKTSFSDRG 913
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 42/227 (18%)
Query: 205 RRKKSFGQGKRRMN-------SRTSLAQREEIIR---RTVYVSDIDQQVTEEQLAALF-- 252
R K+ F + K R N + L + ++ +R +T+Y+ ++++ EE + ALF
Sbjct: 610 RPKREFQESKERPNKQQEKEKDQADLEEHKQKVRSQKKTLYLEQLNEETEEEDITALFIR 669
Query: 253 -VGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAAL-----NLAGTMLGFYPVRVLPS 305
V +++D R+ D R FAF++ +E A +L NL G+ML + +
Sbjct: 670 VVADVKILDIRLIRDEQGKKRGFAFVDVESQEMAEKSLLLNNYNLKGSMLKIHIYK---- 725
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
P N E E T+Y + + + ++ F+ + G++ ++RL+ +
Sbjct: 726 -----PPN---------ESEKSDFTVYVHGLPQTCNEQKLREHFKEI-GDIEQVRLIRNP 770
Query: 366 HHSTR-IAFVEFVMAES---AIAALNCSGVVLGSLPIRVSPSKTPVR 408
+ + + +++F+ +S AI +LN S + ++ + + SK R
Sbjct: 771 NGTLKGFGYIQFLSKKSVQVAIESLNKSKIDNRTISVERNKSKKEAR 817
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGAR 285
E + ++YV ++D V+E L +F G V R+C D + L +A++ F D E +
Sbjct: 39 ENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGK 98
Query: 286 AAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
A+ L T + P R++ S+ R R+ + I+ N+ + D
Sbjct: 99 TAIEKLNYTAIKGRPCRIMWSQ------------RDPSMRKKGSGNIFIKNLHPDI---D 143
Query: 345 VKLFFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVLGSLPIRV 400
K +E SV G + ++ D ++ FV F E+A A++ +G++L + V
Sbjct: 144 NKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYV 203
Query: 401 SP 402
+P
Sbjct: 204 AP 205
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T +ER+M RT++C + +++ D++ FF +V G+V +RL+ D S IA+VEF
Sbjct: 131 TPEERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFQ 187
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES A+ +G L +PI V P++
Sbjct: 188 DVESVPLAMGLNGQKLFGIPIVVQPTQ 214
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+ + Q++ L F G+V D R+ D N R A++EF D E
Sbjct: 133 EERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVES 191
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
A+ L G L P+ V P++ A N + T + +Y ++ +
Sbjct: 192 VPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNI 251
Query: 341 TQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLP 397
T+ +K FE G++ ++ L+ D + S F+ F +E A AL +G L P
Sbjct: 252 TEEMLKGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRP 310
Query: 398 IRV 400
++V
Sbjct: 311 MKV 313
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA
Sbjct: 54 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 113
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ I+ N+D + + F
Sbjct: 114 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGHGNIFIKNLDAAIDNKALHDTF 161
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D +R FV + AE+A AA+ + +G++L
Sbjct: 162 -AAFGNILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVNGMLL 206
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 35/199 (17%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V ++ LA F G + D R+ D NS + F+ F TD E A A +
Sbjct: 79 VFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 138
Query: 289 NLAGTMLGFYPVRV-------------LPSKTAI-----APVN----PTFLPRTEDEREM 326
N G LG +RV P +T + AP+N P +
Sbjct: 139 N--GEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYESVVQQTPA 196
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE-SAIAA 385
T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E +A+A
Sbjct: 197 YNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEHAAMAI 251
Query: 386 LNCSGVVLGSLPIRVSPSK 404
+ G ++ PI+ S K
Sbjct: 252 VQLQGQMVHGRPIKCSWGK 270
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAAL 288
+ + V+ + Q +T+E+L +LF G++ C++ D L + F+ + D + A A+
Sbjct: 67 KTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAI 126
Query: 289 N-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
N L G L ++V PS +I N +Y + + K +TQ +
Sbjct: 127 NTLNGLRLQTKTIKVSYARPSSASIRDAN-----------------LYVSGLPKTMTQKE 169
Query: 345 VKLFFESVCGEVYRLRLLGDYHH--STRIAFVEF---VMAESAIAALNCSGVVLGSLPIR 399
++ F S G + R+L D S + F+ F V AE AI LNC + PI
Sbjct: 170 LEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPIT 228
Query: 400 VSPSKTP 406
V + P
Sbjct: 229 VKFANNP 235
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 45/198 (22%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ + L A F G Q+V R+ G V ++EF +E
Sbjct: 205 DERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKNE 261
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART----------- 330
E AA+ L G L P+ IA + TE E+ ART
Sbjct: 262 ESVPAAIQLTGQKLMGIPI--------IAQL-------TEAEKNRQARTGDGNNGNNNGV 306
Query: 331 ----IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEF---VMAESA 382
+Y NI +T++D++ FE GE+ ++L + +R FV+F A+ A
Sbjct: 307 PFHRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKEEGGRSRGYGFVQFRDPAQAKEA 365
Query: 383 IAALNCSGVVLGSLPIRV 400
+ +N G L PIRV
Sbjct: 366 LEKMN--GFDLAGRPIRV 381
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 121 RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 180
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 181 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 233
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
NID+ VT+ + + FE GE+ L D +R FV F ESA AA++
Sbjct: 234 IKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 202
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FAFI
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAFI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|402218951|gb|EJT99026.1| hypothetical protein DACRYDRAFT_24111 [Dacryopinax sp. DJM-731 SS1]
Length = 1056
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 182 ANNSLIFNNH---NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSD 238
AN++L N+ N R +VN + R+K+ G + R VYV+
Sbjct: 768 ANDALSLNDQELENDRRISVNISDPTRKKQRTDAGADK---------------REVYVAG 812
Query: 239 IDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAGT 293
+ + V +E+L LF G V + R+ P+ + + F F+EF DE GA AAL+L T
Sbjct: 813 LARGVKKEELEKLFGEKGSVKEVRLALGPDGLCKGFGFVEFQDEVGAEAALSLNNT 868
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
I ++YV D+ +V+E+ L +F G V + R+C D N+ L +A++ + + A A
Sbjct: 8 ISSSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERA 67
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+ L P+R P + + +P+ R+ ++ N+DK + D K
Sbjct: 68 LD----TLNNTPIRGKPCRIMWSQRDPSL-------RKSGVGNVFIKNLDKGI---DHKA 113
Query: 348 FFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPS 403
++ S G + +++ D ++S++ FV + +SA A+ +G+++ + V P
Sbjct: 114 LYDTFSAFGNILSCKVVTDDNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGPF 173
Query: 404 KT 405
K+
Sbjct: 174 KS 175
>gi|401424247|ref|XP_003876609.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492852|emb|CBZ28130.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 495
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 284
+++E+ RRT+YVS + + + L L G V RIC FAF+E EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPV 312
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T +ER+M RT++C + +++ D++ FF +V G+V +RL+ D S IA+VEF
Sbjct: 143 TPEERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFQ 199
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSK 404
ES A+ +G L +PI V P++
Sbjct: 200 DVESVPLAMGLNGQKLFGIPIVVQPTQ 226
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 11/183 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+ + Q++ L F G+V D R+ D N R A++EF D E
Sbjct: 145 EERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVES 203
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
A+ L G L P+ V P++ A N + T + +Y ++ +
Sbjct: 204 VPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNI 263
Query: 341 TQADVKLFFESVCGEVYRLRLLGDY--HHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLP 397
T+ +K FE G++ ++ L+ D + S F+ F +E A AL +G L P
Sbjct: 264 TEEMLKGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRP 322
Query: 398 IRV 400
++V
Sbjct: 323 MKV 325
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 131 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 187
Query: 277 EFTDEEGARAALNLAGTML 295
EF+D+E R +L L ++
Sbjct: 188 EFSDKESVRTSLALDESLF 206
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
T+++ DI + VTEE L LF+ G VV I D N + +AF+EF E+ AL+
Sbjct: 13 TLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDCMYALSV 72
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ G L P+++ + T P T DE ++ A+ +Y N+ + V ++ F
Sbjct: 73 MQGVKLFGVPLKLSANST----------PSTGDELDVGAK-LYIGNLSQDVNDGNLLQTF 121
Query: 350 ESVCGEVYRLRLLGDYHHSTR-----IAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
G V R++ D +A+ F A+ A A+N G G PI VS
Sbjct: 122 RQF-GNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAKKAMN--GEYFGGQPITVS 175
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 272
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 290
++YV ++D V+E L +F G V R+C D + L +A++ F D E R A+
Sbjct: 51 SLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAIE- 109
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + P++ P + + +P R+ A I+ N+ + + F
Sbjct: 110 ---KLNYSPIKGKPCRIMWSQRDPAL-------RKKGAGNIFIKNLHPDIDNKALHDTF- 158
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVLGSLPIRVS 401
SV G + ++ D ++ FV F +A+ A++ +G++L + V+
Sbjct: 159 SVFGNILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYVA 211
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGA 284
EE RTV+ + Q+V L F G+V D R+ C A+IEF D E
Sbjct: 266 EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESV 325
Query: 285 RAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
AL L+G L P+ V + K + P F P+ +Y ++ +T
Sbjct: 326 ALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKL----HTGPMRLYVGSLHFNIT 381
Query: 342 QADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPI 398
+ ++ FE G++ ++L+ D S F+ + A+ A AL +G L P+
Sbjct: 382 EDMLRGIFEPF-GKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPM 440
Query: 399 RV 400
+V
Sbjct: 441 KV 442
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----- 258
V ++ + G S S+ + E R+VYV ++D T E+L A F GCG V
Sbjct: 63 VEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTI 122
Query: 259 VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ + G P FA+IEF D+E + AL L ++ ++V +T V+ T P
Sbjct: 123 LTDKFTGHPKG---FAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNRP 179
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEE 282
E+ +R+VYV ++D T E+L + F CGQV + C + G P +A+IEF ++
Sbjct: 42 EVDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKG---YAYIEFEEKS 98
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
+AA+ L ++ ++VLP +T + ++ T
Sbjct: 99 SVKAAVELDESVFRGRVIKVLPKRTNMPGISST 131
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGA 284
EE RTV+ + Q+V L F G+V D R+ C A+IEF D E
Sbjct: 255 EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESV 314
Query: 285 RAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
AL L+G L P+ V + K + P F P+ +Y ++ +T
Sbjct: 315 ALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKA----HTGPMRLYVGSLHFNIT 370
Query: 342 QADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPI 398
+ ++ FE G++ ++L+ D S F+ + A+ A AL +G L P+
Sbjct: 371 EDMLRGIFEPF-GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPM 429
Query: 399 RV 400
+V
Sbjct: 430 KV 431
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESA 382
E ART++C + ++V D++ FF SV G+V +RL+ IA++EF ES
Sbjct: 256 ERDARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGIAYIEFEDPESV 314
Query: 383 IAALNCSGVVLGSLPI----------RVSPSKTPVRPRAPRLPM 416
AL SG L +PI R+ + P +P+A PM
Sbjct: 315 ALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM 358
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 272
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 32/196 (16%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V + LA F G + D R+ D NS + F+ F TD E A A +
Sbjct: 106 VFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 165
Query: 289 NLAGTMLGFYPVRV-----------LPSKT----AIAPVN----PTFLPRTEDEREMCAR 329
N G LG +RV P T A AP+N P +
Sbjct: 166 N--GEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNT 223
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE-SAIAALNC 388
T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E +A+A +
Sbjct: 224 TVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHENAAMAIVQL 278
Query: 389 SGVVLGSLPIRVSPSK 404
G ++ PI+ S K
Sbjct: 279 QGQMVHGRPIKCSWGK 294
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 22/179 (12%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN---SVLRFAFIEFTDEEGARAA 287
R +YV ++ +VTE L +F G V +I D N L + F+E+ D A A
Sbjct: 12 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 71
Query: 288 L-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L L G + +R VN + T E ++ ++ +V A +
Sbjct: 72 LQTLNGRKIFDTEIR----------VNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLA 121
Query: 347 LFFESVCGEVYRLRLLGDYHHSTR-----IAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
F S G + R++ D + +AF + AE AIA +N G LGS IRV
Sbjct: 122 KAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRV 177
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLL 207
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFIEFTDEEGARA 286
R+VYV ++D T ++L F GCG V + C R G P FA+IEF+D + +
Sbjct: 82 RSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVNS 138
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
A+ L T+ ++VLP +T + ++ T
Sbjct: 139 AIGLHETLFRGRVLKVLPKRTNLPGISTT 167
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMA 379
E + E+ AR++Y N+D T +V+L F++ CG V R+ +L D + A+VEFV
Sbjct: 81 EGKEEVDARSVYVGNVDYACTPEEVQLHFQT-CGTVNRVTILMDKFGQPKGFAYVEFVEV 139
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKT 405
E+ AL + L ++VSP +T
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRT 165
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFTDE 281
+EE+ R+VYV ++D T E++ F CG V I G P FA++EF +
Sbjct: 83 KEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKG---FAYVEFVEV 139
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAI 309
E + AL L + L ++V P +T +
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
>gi|389593175|ref|XP_003721841.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438343|emb|CBZ12095.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 495
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 284
+++E+ RRT+YVS + + + L L G V RIC FAF+E EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPV 312
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 272
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 81 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 137
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 138 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 183
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 290
++V D+ ++ + L F G++ DCR+ DP ++ + F+ F + A +A+ +
Sbjct: 62 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKAEAESAIGAM 121
Query: 291 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
G LG + R P+ + A P ++ T+YC + +T+
Sbjct: 122 NGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 181
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
++ F S G + +R+ D + AF+ F ESA A+
Sbjct: 182 MQKTF-SPFGSIQEIRVFKDKGY----AFIRFSTKESATHAI 218
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 204 VRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----- 258
V ++ + G S S+ + E R+VYV ++D T E+L A F GCG V
Sbjct: 63 VEKQMNMSTGSNTSQSVASIEDKIEADSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTI 122
Query: 259 VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
+ + G P FA+IEF D+E + AL L ++ ++V +T V+ T P
Sbjct: 123 LTDKFTGHPKG---FAYIEFADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNRP 179
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 29/180 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
T+YV +D++VT+ L LFV G VV + D NS F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKI 73
Query: 291 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 347
M+ Y P++V + + E+ M I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANIFVGNLDPEV---DEKL 115
Query: 348 FFES-----VCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRVS 401
F++ V +V ++ + +S AFV F E++ +A+ SG L + I VS
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQFLCNRAITVS 175
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+ E+ R+IY N+D T +++ F CG V R+ +L + H
Sbjct: 85 SPLNMSL----EDKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSVNRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF +S A+ + I+V P +T
Sbjct: 140 PKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALN- 289
++YV D+D VT+ QL F QVV R+C D N+ L + ++ +++ + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 107 LNYSYLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 155 -SGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 208
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGARAALN-LA 291
+YV ++D VT+E+L LF G + C++ DP+ + + F+ F+ A LN +
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 292 GTMLGFYPVRV 302
G M+G P+ V
Sbjct: 390 GKMVGGKPLYV 400
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + A F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 145 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 204
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 205 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEDD 255
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 256 IKSVFEAFGPILYCKLAQGTSVHTHKGYGFIEYANKQAMDEAIASMNL--FDLGGQLLRV 313
Query: 401 SPSKTP 406
S TP
Sbjct: 314 GRSITP 319
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALN- 289
++YV D+D VT+ QL F QVV R+C D N+ L + ++ +++ + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 107 LNYSYLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 155 -SGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 208
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDEEGARAALN-LA 291
+YV ++D VT+E+L LF G + C++ DP+ + + F+ F+ A LN +
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 292 GTMLGFYPVRV 302
G M+G P+ V
Sbjct: 390 GKMVGGKPLYV 400
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 208 KSFGQGKRRMNSRTSL---AQREEIIRRTV--------YVSDIDQQVTEEQLAALFVGCG 256
K + GK + S L Q E+I + TV Y+ ++D V +E+L LF G
Sbjct: 271 KEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFG 330
Query: 257 QVVDCRICGDPNSVLRFA-FIEFTDEEGARAALN-LAGTMLGFYPVRV 302
+ C++ DPN + R + F+ F+ EGA AL + G M+ P+ V
Sbjct: 331 TITSCKVMRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYV 378
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 30/181 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ V + QL LF QVV RIC D L + ++ F++ A A+++
Sbjct: 25 SLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAKAIDV 84
Query: 291 AGTMLGFYP-----VRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
L F P +R++ S R R+ A ++ N+DK + D
Sbjct: 85 ----LNFTPLNGKIIRIMYSI------------RDPSARKSGAANVFIKNLDKAI---DH 125
Query: 346 KLFFE--SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
K ++ S G + ++ D S FV+F ESA A++ +G+++ + V
Sbjct: 126 KALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVG 185
Query: 402 P 402
P
Sbjct: 186 P 186
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 24/179 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 190
Query: 275 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 191 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKANF 239
Query: 330 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y NI VT + + FE G+V L D R FV F E+A A+
Sbjct: 240 TNVYVKNIGPDVTDDEFRELFEKF-GDVTSSSLARDQEGKPRGFGFVNFTTHEAAFKAV 297
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+ V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 RIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 190
Query: 275 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
F+ + TDE ++A ++ G +L V V +P K R EM A
Sbjct: 191 FVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKANF 239
Query: 330 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y NI VT+ D + FE G+V L D +R FV F ESA A++
Sbjct: 240 TNVYVKNIAPDVTEDDFRELFEKF-GDVTSSSLARDQEGKSRGFGFVNFTTHESASKAVD 298
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 290
++YV D++ V E QL LF QVV R+C D + L +A++ F++ + A A+ L
Sbjct: 34 SLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDASNAMEL 93
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ + ++ +P+ R+ ++ N+D + ++ F
Sbjct: 94 ----LNFTPLNGKAIRIMVSHRDPSM-------RKSGHANVFIKNLDTSIDNKALQETFA 142
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
S G V ++ D + ++ FV+F E+A +A+N
Sbjct: 143 SF-GSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAIN 179
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R ++ R+ +R++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 105 RIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGYG 164
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
F++F +EE A++A+N ML + K R E +Y
Sbjct: 165 FVQFENEEAAQSAINRLNGML-------INDKEVFVGRFVRHQERIEATGSPKFTNVYVK 217
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
N+ + + D+K FF + + + S FV F +SA AA+
Sbjct: 218 NLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAV 269
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNLA 291
TV + ++ +++ + G +V I D R + F+EF + E A+ ++L
Sbjct: 52 TVMLRNLSYNTSDDSIKEKLSKYGSIVRVNIPTDERGRSRGYGFVEFDEVEAAQKVVDLK 111
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES 351
+ V++ SK F RT ++ N+ + + D++ FE+
Sbjct: 112 AMEMDGREVQLQQSK-----ARDEFSGRT--------TQVFVGNLPESAEEQDIRELFET 158
Query: 352 VCGEVYRLRLLGDYHHSTR--IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
CGE+ +R+ D + AFV+F + S AAL G + IRV+ K+
Sbjct: 159 -CGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALEKDGSEFKGVSIRVNEEKS 213
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 226 REEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDE 281
R+E RT V+V ++ + E+ + LF CG++ + R+ D ++ + FAF++F D
Sbjct: 128 RDEFSGRTTQVFVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQFRDS 187
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKT 307
+AAL G+ +RV K+
Sbjct: 188 SSVKAALEKDGSEFKGVSIRVNEEKS 213
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMA 379
E + E+ AR++Y N+D T +V+L F++ CG V R+ +L D + A+VEFV
Sbjct: 81 EGKEEVDARSVYVGNVDYACTPEEVQLHFQT-CGTVNRVTILMDKFGQPKGFAYVEFVEV 139
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPV 407
E+ AL + L ++VSP +T V
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFTDE 281
+EE+ R+VYV ++D T E++ F CG V I G P FA++EF +
Sbjct: 83 KEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKG---FAYVEFVEV 139
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAI 309
E + AL L + L ++V P +T +
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 304 PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLG 363
P K +PV T +ER+ ART++C + ++ D++ FF +V G+V +R++
Sbjct: 127 PFKKEKSPVRQPIDNLTPEERD--ARTVFCMQLAARIRPRDLEEFFSAV-GKVRDVRMIS 183
Query: 364 DYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
D + S IA++EFV A S A+ SG L +PI V S+
Sbjct: 184 DRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQ 226
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 6/179 (3%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
EE RTV+ + ++ L F G+V D R+ D NS A+IEF +
Sbjct: 145 EERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSV 204
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
A+ L+G L P+ V S+ + + +Y ++ +T+
Sbjct: 205 PLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEM 264
Query: 345 VKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
++ FE G++ ++L+ D S F+ F E A AL+ +G L P++V
Sbjct: 265 LRGIFEPF-GKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQLNGFELAGRPMKV 322
>gi|146419598|ref|XP_001485760.1| hypothetical protein PGUG_01431 [Meyerozyma guilliermondii ATCC
6260]
Length = 886
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 22/196 (11%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--------VDCRICGDPNSVLRFA 274
+ R++++ R V V ++D TE +L +F G++ D R G N +A
Sbjct: 680 IETRKQVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLPIKKDMRNKGHVNG--GYA 737
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
F+ F E A ALN G ++ V V ++ ++ NP+ +D+ RTI T
Sbjct: 738 FVTFKTEPSALNALNADGELIRNRKVHVYKAQPQVSIYNPS---DYDDQ-----RTITIT 789
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLG 394
V Q ++ F G V + L H T A +EF +E+ +AL +
Sbjct: 790 GFPDSVRQEQLEAFMAEHFGTVSKSFL----DHETGSAVIEFSDSETTKSALQIESTIFD 845
Query: 395 SLPIRVSPSKTPVRPR 410
+RV P + P+
Sbjct: 846 GNTLRVGPKSSFRNPQ 861
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 209 SFGQGKRRMNSR-TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-D 266
+ + K+ +N + +++Q E I ++VS+ ++ ++ ALF CGQ+V R
Sbjct: 572 ALTKDKKAINGQHIAVSQLREAI---IWVSNFPPSFSQSEVKALFEDCGQIVSARFPSLK 628
Query: 267 PNSVLRFAFIEFTDEEGARAALNLA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDERE 325
RF ++EFT E A AA+ GT L + K +A P + E ++
Sbjct: 629 SGRERRFCYLEFTKPESAAAAVKKHNGTKLS-DKISGDSFKLVVAISRPP--KKIETRKQ 685
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRL------LGDYHHSTRIAFVEFVMA 379
+ R + N+D T+++++ FE GE+ + L H + AFV F
Sbjct: 686 VMHRQVCVKNLDYYTTESELRTVFEK-HGELEEISLPIKKDMRNKGHVNGGYAFVTFKTE 744
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
SA+ ALN G ++ + + V ++ V P
Sbjct: 745 PSALNALNADGELIRNRKVHVYKAQPQVSIYNP 777
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMA 379
E + E+ AR++Y N+D T +V+L F++ CG V R+ +L D + A+VEFV
Sbjct: 81 EGKEEVDARSVYVGNVDYACTPEEVQLHFQT-CGTVNRVTILMDKFGQPKGFAYVEFVEV 139
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKTPV 407
E+ AL + L ++VSP +T V
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFTDE 281
+EE+ R+VYV ++D T E++ F CG V I G P FA++EF +
Sbjct: 83 KEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKG---FAYVEFVEV 139
Query: 282 EGARAALNLAGTMLGFYPVRVLPSKTAI 309
E + AL L + L ++V P +T +
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 208 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 267
K G + NS S A +EE R+V+V ++D T E++ F CG V I D
Sbjct: 63 KEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 122
Query: 268 NSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
+ FA++EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 123 FGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAI 383
E +R+++ N+D T +V+ F+S CG V R+ +L D + A+VEFV AE+
Sbjct: 83 EADSRSVFVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQ 141
Query: 384 AALNCSGVVLGSLPIRVSPSKTPV------RPR 410
AL + L ++V P +T V RPR
Sbjct: 142 EALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 174
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 208 KSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 267
K G + NS S A +EE R+V+V ++D T E++ F CG V I D
Sbjct: 63 KEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK 122
Query: 268 NSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
+ FA++EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 123 FGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAI 383
E +R+++ N+D T +V+ F+S CG V R+ +L D + A+VEFV AE+
Sbjct: 83 EADSRSVFVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQ 141
Query: 384 AALNCSGVVLGSLPIRVSPSKTPV------RPR 410
AL + L ++V P +T V RPR
Sbjct: 142 EALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 174
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 277 EFTDEEGARAALNL 290
EF+D+E R +L L
Sbjct: 246 EFSDKESVRTSLAL 259
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 215 RRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 272
++M S+ + QR++ + VYV I ++ E+ + F+ G + + DP +
Sbjct: 19 QQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKH 78
Query: 273 --FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
FAF+E+ E A+ AL + G M+G ++V+ + + P + + +E + R
Sbjct: 79 KGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR 137
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
IY +I + +T+ D+K FE+ Y +L H F+E+ ++A+ A+
Sbjct: 138 -IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 196
Query: 389 SGVV-LGSLPIRVSPSKTP 406
+ LG +RV + TP
Sbjct: 197 MNLFDLGGQYLRVGRAITP 215
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 189 SIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYI 245
Query: 277 EFTDEEGARAALNL 290
EF+D+E R +L L
Sbjct: 246 EFSDKESVRTSLAL 259
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+ E+ R+IY N+D T +++ F CG V R+ +L + H
Sbjct: 85 SPLNMSL----EDKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSVNRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF +S A+ + I+V P +T
Sbjct: 140 PKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +AF AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q V E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F VR P + + +P+ R ++ N+D+ + + F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRAIDNKAIYDTF- 110
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDC-----RICGDPNSVLRFAFIEFTDEEGAR 285
RR++YV ++D T ++L F CG V R G P FA+IEF+D E R
Sbjct: 65 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 121
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
A+ L T+ ++V P +T I + T
Sbjct: 122 TAMALDETLFRGRVIKVSPKRTNIPGFSTT 151
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 310 APVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRL-----RLLG 363
+P F T +ER + R+IY N+D T +++++F S CG V R+ R G
Sbjct: 46 SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNS-CGHVNRVTIPYNRFTG 104
Query: 364 DYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
H A++EF ES A+ + I+VSP +T +
Sbjct: 105 ---HPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNI 145
>gi|146090675|ref|XP_001466305.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398017412|ref|XP_003861893.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070667|emb|CAM69016.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500121|emb|CBZ35196.1| hypothetical protein, conserved [Leishmania donovani]
Length = 495
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGA 284
+++E+ RRT+YVS + + + L L G V RIC FAF+E EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPV 312
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 290
++YV ++D V+E L +F G V R+C D + L +A++ F D E + A+
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIE- 94
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + P++ + + +P R+ + I+ N+ + D K FE
Sbjct: 95 ---QLNYTPIKGRLCRIMWSQRDPAL-------RKKGSGNIFIKNLHPDI---DNKALFE 141
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVLGSLPIRVSPSKT 405
SV G + ++ D ++ FV F SA A++ +G++L I V+P T
Sbjct: 142 TFSVFGNILSSKIATDETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLT 200
>gi|340055809|emb|CCC50130.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 657
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV--LRFAFIEFTDE 281
A + +++ RTV++ + + + + +LAAL CG+ + RICG+ S + F+EF D+
Sbjct: 96 AVKTDLLARTVHLRFLPKGMLQSELAALCAECGEYLRVRICGNATSTQNWIYGFVEFADK 155
Query: 282 EGARAALNLAGTML----GFYPVRVL 303
+GA A + +G L G P+R++
Sbjct: 156 QGAAAMMRRSGMELSNGPGKPPLRLM 181
>gi|389584751|dbj|GAB67483.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 601
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
++ + +Y+ +I + +E+ + ALF G ++ + + AFIEFT+EE +AA
Sbjct: 162 DVFSKIIYMENIPENCSEDDIKALFKNVGTTTSYKLQYNEQKKMNTAFIEFTNEEHVKAA 221
Query: 288 LNLAGTMLG 296
L L GT +G
Sbjct: 222 LLLNGTKIG 230
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
I VYV ++ VTE+ + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 290 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 316
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISHNPAF 91
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 160
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 205
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 14/162 (8%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 290
++V D+ ++ + L F G++ DCR+ DP ++ + F+ F + A +A+ +
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 291 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
G LG + R P+ + A P ++ T+YC + +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
++ F S G + +R+ D + AF+ F ESA A+
Sbjct: 177 MQKTF-SPFGSIQEIRVFKDKGY----AFIRFSTKESATHAI 213
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N ++ +K FFE G++ +++ ++ +A+ AE+A+ A
Sbjct: 184 NVYVKNFTEEFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q + E L F G V+ R+C D L +A++ F A AL+
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F +R P + + +P+ R ++ N+DK + + F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL ++ E R+VY+ ++D T E+L F GCG + + C + G P FA+I
Sbjct: 86 SLEEKIETDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D++ + A+ + ++ ++V+P +T
Sbjct: 143 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 173
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V +E LA F G + D R+ D NS + F+ F TD E A A +
Sbjct: 104 VFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 163
Query: 289 NLAGTMLGFYPVRV------------------------LPSKTAIAPVN----PTFLPRT 320
N G LG +RV + + +A AP+N P
Sbjct: 164 N--GEWLGSRAIRVNWANQKTQGAPPTTTASSPRPGGAVTTGSAPAPINFQGGPLSYESV 221
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE 380
+ T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E
Sbjct: 222 VQQTPAYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHE 276
Query: 381 -SAIAALNCSGVVLGSLPIRVSPSK 404
+A+A + G ++ PI+ S K
Sbjct: 277 HAAMAIVQLQGQMVHGRPIKCSWGK 301
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTD-EEGARAALN 289
++YV D+D VT+ QL F G VV R+C D L + ++ FT+ ++ ARA
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L P+RV+ S R R A I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ ESA A+ +G++L + V P
Sbjct: 145 SSF-GNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D +++E+L +F G V ++ DPN + + F+ F T EE A L+
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLS 379
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 380 GKMIESKPLYV 390
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
+E + EM +R+++ N+D T +V+ F S CG V R+ +L D + A+VEFV
Sbjct: 73 SEAKEEMDSRSVFVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFVE 131
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV----RPRAPR 413
AE+ A+ S L I+V+P +T V +PR R
Sbjct: 132 AEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGR 170
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 276
N+ TS A +EE+ R+V+V ++D T E++ F CG V I D + FA++
Sbjct: 69 NATTSEA-KEEMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYV 127
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
EF + E + A+ L+ + L ++V P +T +
Sbjct: 128 EFVEAEAIQEAVKLSESELHGRQIKVAPKRTNV 160
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+ E+ R+IY N+D T +++ F CG V R+ +L + H
Sbjct: 85 SPLNMSL----EDKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSVNRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF +S A+ + I+V P +T
Sbjct: 140 PKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 36/207 (17%)
Query: 214 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR- 272
KRR + +E +RTV+V + ++ ++L A F G V D +I D S
Sbjct: 186 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 245
Query: 273 -FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART- 330
++EF +EE A+ L G L P+ IA TE E+ AR
Sbjct: 246 GVGYVEFKNEESVPLAIQLTGQKLLGIPI--------IAQF-------TEAEKNKAARNT 290
Query: 331 ---------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFV 374
+Y NI +T++D++ FE GE+ ++L D + +R FV
Sbjct: 291 EGHVSGNQNSIPFHRLYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFV 349
Query: 375 EFVMAESAIAAL-NCSGVVLGSLPIRV 400
+F A AL +G L PIRV
Sbjct: 350 QFRDPNQAREALEKMNGFDLAGRPIRV 376
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 36/207 (17%)
Query: 214 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR- 272
KRR + +E +RTV+V + ++ ++L A F G V D +I D S
Sbjct: 188 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 247
Query: 273 -FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART- 330
++EF +EE A+ L G L P+ IA TE E+ AR
Sbjct: 248 GVGYVEFKNEESVPLAIQLTGQKLLGIPI--------IAQF-------TEAEKNKAARNT 292
Query: 331 ---------------IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFV 374
+Y NI +T++D++ FE GE+ ++L D + +R FV
Sbjct: 293 EGHVSGNQNSIPFHRLYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFV 351
Query: 375 EFVMAESAIAAL-NCSGVVLGSLPIRV 400
+F A AL +G L PIRV
Sbjct: 352 QFRDPNQAREALEKMNGFDLAGRPIRV 378
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNL 290
EF D+E R A+ L
Sbjct: 145 EFADKESVRTAMAL 158
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HS 368
PV P + E++ E R+IY N+D T +++ F CG V R+ +L D + H
Sbjct: 81 PVGPVIM-SIEEKMEADGRSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHP 138
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ES A+ + I+V +T
Sbjct: 139 KGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRT 175
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 215 RRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR 272
++M S+ + QR++ + VYV I ++ E+ + F+ G + + DP +
Sbjct: 117 QQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKH 176
Query: 273 --FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
FAF+E+ E A+ AL + G M+G ++V+ + + P + + +E + R
Sbjct: 177 KGFAFVEYEIPEAAQLALEQMNGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR 235
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
IY +I + +T+ D+K FE+ Y +L H F+E+ ++A+ A+
Sbjct: 236 -IYIASIHQDLTEDDIKSVFEAFGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIAS 294
Query: 389 SGVV-LGSLPIRVSPSKTP 406
+ LG +RV + TP
Sbjct: 295 MNLFDLGGQYLRVGRAITP 313
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN-L 290
++V D+ ++ + L F G++ DCR+ DP ++ + F+ F + A +A+ +
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 291 AGTMLGFYPVRV-LPSKTAIAPVN-----PTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
G LG +R ++ AP N P ++ T+YC + +T+
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
++ F+ G + +R+ D + AF+ F ESA A+
Sbjct: 176 MQKTFQPF-GTIQEIRVFKDKGY----AFIRFSTKESATHAI 212
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNLA 291
V+ I + + E++L LF CG++ D R+ DP + +AF+ FT + A A+
Sbjct: 181 VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGTNRGYAFVTFTSRDAACNAVR-- 238
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC-ARTIYCTNIDKKVTQADVKLFFE 350
V + +P P DE+ M + +Y N+ + ++ +K FE
Sbjct: 239 ---------EVWGCDIIVDWADPQEEP---DEQTMSKVKVLYVRNLTQDTSEEKLKESFE 286
Query: 351 SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSKTP 406
+ G+V R++ + DY AFV F + A+ A+ + G + I VS +K P
Sbjct: 287 AF-GKVERVKKIKDY------AFVHFEDRDHAVNAMKDLDGKDINGSAIEVSLAKPP 336
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VTE QL +F G V R+C D + L +A++ F + A AL+
Sbjct: 25 SLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERALD- 83
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + ++ + +P+ R+ A I+ N+DK V + F
Sbjct: 84 ---TLNYTQIKGKACRIMWKHRDPSI-------RKSGAGNIFIKNLDKTVDTRTLHDTF- 132
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ D H ++R FV+F AE A A++ +G++L + V P
Sbjct: 133 SQFGNILSCKVSMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDKRLFVGP 186
>gi|224083926|ref|XP_002307174.1| predicted protein [Populus trichocarpa]
gi|222856623|gb|EEE94170.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 10/183 (5%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ QV + F G+V D R D + + F +EFT E A ALN
Sbjct: 391 KTLFVGNLSFQVERADVENFFKEAGEVADVRFALDADQRFKGFGHVEFTTTEAALKALNF 450
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR----TIYCTNIDKKVTQADVK 346
G L VR+ ++ + T + + + R TI+ DK + +++
Sbjct: 451 NGKSLLGRDVRLDLARERGERTSNTPYSKDSNSFQKGGRGQSQTIFVKGFDKFGAEDEIR 510
Query: 347 LFFE---SVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
+ CGE+ R+ + DY +A++EF A++ A +G LG + V
Sbjct: 511 SSLQEHFGSCGEISRISIPTDYETGAIKGMAYLEFNDADAMNKAFELNGSQLGESYLTVD 570
Query: 402 PSK 404
+K
Sbjct: 571 EAK 573
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ +VTE L F G V+ R+C D S L +A++ + A+ AL
Sbjct: 9 SLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALE- 67
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F + P + A NP R A I+ N++K++ D K ++
Sbjct: 68 ---ELNFEKIHDKPCRIMWAQRNPA-------ARRSGAGNIFIKNLNKEI---DNKALYD 114
Query: 351 --SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC 388
S G + ++ D +R FV F E A A++
Sbjct: 115 TFSAFGTILSCKVAADEKGESRGYGFVHFEKEEDAQKAIDT 155
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 28/175 (16%)
Query: 143 ELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNA-- 200
+L++LF K + F LAK N+ GF + F N A N V A
Sbjct: 202 DLKKLFEKFGTITSTF----LAKDENDKSRGFGF---------VNFENSEAANAAVEAMN 248
Query: 201 --NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQQVTEEQLA 249
RK G+ ++ L + + IR+ +Y+ + + VTE+ L
Sbjct: 249 EKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVTEDALR 308
Query: 250 ALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LAGTMLGFYPVRV 302
F G + +I D N R F F+ F + A AA+ + G+M+ P+ V
Sbjct: 309 DKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYV 363
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+D VT+ QL F GQVV R+C D + L + ++ + + A ALN
Sbjct: 46 SLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNE 105
Query: 291 AGTM-LGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
M L +RV+ + R R+ I+ N+DK + + F
Sbjct: 106 LNFMALNGRAIRVM------------YSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETF 153
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
S G + ++ D S FV++ E+A A++ +G++L + V P
Sbjct: 154 -SAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGP 207
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 211 GQGKRRMNSRTSLAQR-EEIIRRT--------VYVSDIDQQVTEEQLAALFVGCGQVVDC 261
G+ +++ T L Q+ E+ ++ +YV ++D+ VT+++L F G + C
Sbjct: 297 GKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSC 356
Query: 262 RICGDPNSVLRFA-FIEF-TDEEGARAALNLAGTMLGFYPVRV 302
++ DP+ V R + F+ F T EE RA + G M+ P+ V
Sbjct: 357 KVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYV 399
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 216 RMNSRTSLAQREEIIRR----TVYVSDIDQQVTEEQLAALFVG-CGQVVDCRICGDPNSV 270
++N + RE+ I + +++V D+ V E + +LF +I DP +
Sbjct: 166 KLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTN 225
Query: 271 LR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRV---LPSKTA--IAPVN--PTFLP-- 318
+ + F+ FTDE ++AL + G + G P+RV P A +PVN P +P
Sbjct: 226 VSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPV 285
Query: 319 -------RTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 371
+ T++ + K V++ ++K F++ GE+ +++
Sbjct: 286 GFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNF-GEIVYVKI----PPGKGC 340
Query: 372 AFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
FV+FV +SA A+N G LG+ IR+S
Sbjct: 341 GFVQFVNRQSAEIAINQLQGYPLGNSRIRLS 371
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+ E+ R+IY N+D T +++ F CG V R+ +L + H
Sbjct: 85 SPLNMSL----EDKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSVNRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT-----PVRPRAPR 413
A++EF +S A+ + I+V P +T V R PR
Sbjct: 140 PKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 81 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 139
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E+ ALN + L I+VSP +T V + R PR
Sbjct: 140 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPR 177
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 276
N+ T+ A +E++ R+VYV ++D T E++ F CG V I D + FA++
Sbjct: 77 NASTAEA-KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 135
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
EF ++E + ALNL + L ++V P +T +
Sbjct: 136 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 168
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 162
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 207
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCG-----QVVDCRICGDPNSVLRFAFIEFTDE 281
+E RRTV+V + ++ ++L A F G Q+V R+ G V ++EF DE
Sbjct: 183 DERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKDE 239
Query: 282 EGARAALNLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKK 339
E A+ L G L P+ ++ ++ NP + ++ + +Y NI
Sbjct: 240 ESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANASGNQNSIPFHRLYVGNIHFS 298
Query: 340 VTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLP 397
+T++D++ FE GE+ ++L + +R FV+F A AL +G L P
Sbjct: 299 ITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRP 357
Query: 398 IRV 400
IRV
Sbjct: 358 IRV 360
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 9/176 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 291
+YV ++D +TEE L F G++V I D R F F+ F + + AR A+ +
Sbjct: 194 LYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARWAMERMN 253
Query: 292 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
GT LG Y R + F R E + +Y NID VT +++
Sbjct: 254 GTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKNIDDDVTDEELRE 313
Query: 348 FFESVCGEVYRLRLL-GDYHHSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRVS 401
F S CG + +L+ D S FV F +E A A+N G + P+ V+
Sbjct: 314 HF-SQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPLYVA 368
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 18/97 (18%)
Query: 224 AQREEIIRR----------------TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 267
A+RE+I+RR VYV +ID VT+E+L F CG + ++ D
Sbjct: 271 AEREQILRRQFEEKRKEQITKFKGSNVYVKNIDDDVTDEELREHFSQCGTITSAKLMKDD 330
Query: 268 NSVLR-FAFIEFTDEEGARAALN-LAGTMLGFYPVRV 302
+ F F+ F+ E A A+N G M P+ V
Sbjct: 331 KGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPLYV 367
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 162
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 207
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 192 NARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAAL 251
N NG + N R + ++G G RR+++ + +++V D+ +V++E L +
Sbjct: 65 NTFNGQIVPNTIHRFRLNWGAGGRRIDT---------VEDHSIFVGDLAPEVSDELLLST 115
Query: 252 F-VGCGQVVDCRICGDPNSVL--RFAFIEFTDEEGARAALNLAGTMLGFY----PVRVLP 304
F V ++ DP + + F F+ F D+ A AL TM G Y P+RV
Sbjct: 116 FSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQ---TMNGVYCSSRPMRVSV 172
Query: 305 SKTAI-------APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVY 357
+ P++ T + E E T++ +D T+ D++ F V GE+
Sbjct: 173 ATDRTKTRGIMPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARF-GVIGEIM 231
Query: 358 RLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSPSKT 405
+++ FV++V ++A A+N +G ++ + +R + ++
Sbjct: 232 SVKV----PPGRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRS 276
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 13/187 (6%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFT 279
S+ EE RTV+ + + + L F G+V D R+ C A+IEF
Sbjct: 130 SMLTPEERDARTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRRFKGIAYIEFK 189
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNI 336
D E A+ L G L P+ V P+ K +A P + RT +Y ++
Sbjct: 190 DPESVPLAMGLNGQKLLGVPIVVQPTQAEKNRMANSMPNMVQRT----HYGPMKLYVGSL 245
Query: 337 DKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+T+ ++ FE G V ++L+ D S F+ + AE A AL + +G +
Sbjct: 246 HYNITEEMLRGIFEPF-GHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHLNGFEI 304
Query: 394 GSLPIRV 400
P++V
Sbjct: 305 AGRPMKV 311
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVE 375
T +ER+ ART++C + K + D++ FF SV G+V +R++ + TR IA++E
Sbjct: 133 TPEERD--ARTVFCMQLSKTIRARDLEEFFSSV-GKVRDVRMIT--CNKTRRFKGIAYIE 187
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSK 404
F ES A+ +G L +PI V P++
Sbjct: 188 FKDPESVPLAMGLNGQKLLGVPIVVQPTQ 216
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D+E R A+ L ++ ++V +T
Sbjct: 145 EFADKESVRTAMALDESLFRGRQIKVGAKRT 175
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 208 KSFGQGKR-----RMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCR 262
K FG+ R R NS EE RTV+V + Q++ L F G+V D R
Sbjct: 114 KPFGRRNRSPLGLRSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVR 173
Query: 263 --ICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFL 317
+C A+IEF D E AL L+G L P+ V + K + P +
Sbjct: 174 LIVCNKTRRFKGIAYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLM 233
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P+ +Y ++ +T+ ++ FE G++ ++L+ D S F+
Sbjct: 234 PKN----MTGPMRLYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIA 288
Query: 376 FVMAESAIAAL-NCSGVVLGSLPIRV 400
F E A AL +G L P++V
Sbjct: 289 FRNCEDAKKALEQLNGFELAGRPMKV 314
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 75 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 133
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E+ ALN + L I+VSP +T V + R PR
Sbjct: 134 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPR 171
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 276
N+ T+ A +E++ R+VYV ++D T E++ F CG V I D + FA++
Sbjct: 71 NASTAEA-KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
EF ++E + ALNL + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + A F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 112 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 171
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 172 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 222
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 223 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 280
Query: 401 SPSKTP 406
S TP
Sbjct: 281 GRSITP 286
>gi|405977322|gb|EKC41780.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 646
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G V+ R+C D L +A++ F A AL+
Sbjct: 17 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F ++ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 77 ----MNFDTIKGRPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKALYD 122
Query: 351 --SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA-IAALNCSGVVL 393
S G + +++ D H S FV F E+A IA +G++L
Sbjct: 123 TFSAFGNILSCKIVCDEHGSRGYGFVHFETEEAARIAIEKVNGMLL 168
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG V + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAMDESMFRGRQIKVMPKRT 177
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+ E+ R+IY N+D T +++ F CG V R+ +L + H
Sbjct: 85 SPLNMSL----EDKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSVNRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT-----PVRPRAPR 413
A++EF +S A+ + I+V P +T V R PR
Sbjct: 140 PKGFAYIEFAERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 214 KRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLR 272
K+R+N R Q TVYV++ E + LF CG +++ R N+ R
Sbjct: 1069 KKRLNGREITVQLG--FNTTVYVTNFPPTADENWIRELFKECGPILEVRFPSLKYNNHRR 1126
Query: 273 FAFIEFTDEEGARAALNLAGTML-GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC---A 328
F +++F E A A + G + GF V L P + ER
Sbjct: 1127 FCYVQFDASEDAEKATEMNGKDVEGFKLVSKLSD------------PNVKQERSGAVYEG 1174
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESAIAAL 386
R ++ NID T+ D++ F S G V +RL+ G HS F++F ESA A+L
Sbjct: 1175 REVFVRNIDYAATEDDIRELF-SKYGTVKSIRLISKGRGVHSG-YGFLDFETTESANASL 1232
Query: 387 NC 388
Sbjct: 1233 EL 1234
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAF 275
+ T AQ+ ++YV D++ VTE QL F G VV R+C D L +A+
Sbjct: 23 DGTTPAAQQPGAGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAY 82
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
+ F A A++ L ++ P+RVL S+ R R I+
Sbjct: 83 VNFQSPNDAAHAIDVLNFQVINGKPIRVLYSQ------------RDPAVRRSGVGNIFIK 130
Query: 335 NIDKKVTQADVKLFFESVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSG 390
N+DK + D K ++ G + ++ D +++ FV+F E+A AA+ N +G
Sbjct: 131 NLDKAI---DNKALLDTFAQFGTITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNG 187
Query: 391 VVLGSLPIRVSP 402
+ L + V P
Sbjct: 188 MELNDKQVYVGP 199
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD-EEGA 284
E++ +Y+ +++ +E+L LF G + CR+ D + V R AF+ F+ +E
Sbjct: 313 EKMAGANLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEAT 372
Query: 285 RAALNLAGTMLGFYPVRV 302
RA + G M+G P+ V
Sbjct: 373 RAVTEMNGKMVGAKPLYV 390
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 129 RIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 188
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + R EM A +Y
Sbjct: 189 FVHYETAEAANNAIKAVNGML-------LNEKKVFVGHHIPKKDRMSKFEEMKANFTNVY 241
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAALN 387
NID +VT + + FE G++ L D S FV FV ESA A++
Sbjct: 242 VKNIDLEVTDDEFRELFEKY-GQITSASLAHDNETGKSRGFGFVNFVKHESAAKAVD 297
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + ++G +A
Sbjct: 58 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKALEE 117
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 118 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDGAIDNKALHDTF 165
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVL 393
+ G + ++ D + +++ FV + AE+A A+ +G++L
Sbjct: 166 -AAFGNILSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGMLL 210
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
EE I+ VYV + V E L + F CG +VD R+ D ++ F +I+F EGA
Sbjct: 354 EEGIK-NVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDFETCEGA 412
Query: 285 RAALNLA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIYCTNIDKKVT 341
+ A+ GT L ++V S A P R + E+ A T++ N+ T
Sbjct: 413 QKAIETKNGTELDGRTLKVDLS-APRAERAPAENKRDFSKEELSAESTTLFVGNLPFSAT 471
Query: 342 QADVKLFFESVCGEVYRLRLLGDYHHSTRI---AFVEFVMAESAIAAL 386
Q V F + G+V +RL D + R+ +VEF ESA AA+
Sbjct: 472 QDSVWEIF-AEYGDVNSVRLPTD-PETQRVKGFGYVEFATLESARAAV 517
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 236 VSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV---LRFAFIEFTDEEGARAALNLAG 292
V+ + Q +TE ++ ++F G + CR+ D F F+ + +EE A+ A+
Sbjct: 108 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 165
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES- 351
L YP+R K + A P+++D +E +Y TN+ + +T+ + + F
Sbjct: 166 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 214
Query: 352 ---VCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALN 387
V + R +L G +AFV F A+ AI+ALN
Sbjct: 215 GTIVQKNILRDKLTG---QPRGVAFVRFNKREEAQEAISALN 253
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 137 FKRDM--RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR 194
+DM RE+ +FS + P+ + L +T G++ GF N L N A
Sbjct: 111 LPQDMTEREMYSMFSAMGPIESCRLMRDLKQT--------GYSYGFGFVNYL---NEEA- 158
Query: 195 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG 254
A A++ + +R+ + Q ++I +Y++++ + +TEEQL +F
Sbjct: 159 -----AQRAIKCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGK 213
Query: 255 CGQVVDC-----RICGDPNSVLRFAFIEFTDEEGARAALN 289
G +V ++ G P V AF+ F E A+ A++
Sbjct: 214 YGTIVQKNILRDKLTGQPRGV---AFVRFNKREEAQEAIS 250
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLL 208
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
VYV +IDQ TEE+ LF G++ + D S F F+ FT + A AA+
Sbjct: 238 VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAV 294
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
+E + EM AR++Y N+D T +V+ F S CG V R+ +L D + A+VEF+
Sbjct: 73 SESKEEMDARSVYVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFLE 131
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV----RPRAPR 413
E+ A+ + L I+V+P +T V +PR R
Sbjct: 132 VEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRGGR 170
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFT 279
+S +EE+ R+VYV ++D T E++ F CG V I D + FA++EF
Sbjct: 71 SSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFL 130
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
+ E + A+ L + L ++V P +T +
Sbjct: 131 EVEAVQEAVKLNESELHGRQIKVAPKRTNV 160
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLL 208
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
VYV +IDQ TEE+ LF G++ + D S F F+ FT + A AA+
Sbjct: 238 VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAV 294
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTD-EEGARAALN 289
++YV D+D VT+ QL F G VV R+C D L + ++ FT+ ++ ARA
Sbjct: 21 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 80
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L P+RV+ S R R A I+ N+D+ + + F
Sbjct: 81 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 128
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ ESA A+ +G++L + V P
Sbjct: 129 SSF-GNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 182
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+YV ++D +++E+L +F G V ++ DPN + + F+ F T EE A L+
Sbjct: 304 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLS 363
Query: 292 GTMLGFYPVRV 302
G M+ P+ V
Sbjct: 364 GKMIESKPLYV 374
>gi|323452921|gb|EGB08794.1| hypothetical protein AURANDRAFT_63849 [Aureococcus anophagefferens]
Length = 322
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFV-GCGQV--VDCRICGD-PNSVLRFAFIEFTDEEGARAA 287
R YV + TE +++ F CG+V VD + D P AF+ F DE+ + A
Sbjct: 118 RRAYVGGLPYSSTEASVSSYFANACGEVRRVDLKDFDDTPGKFCGIAFVTFGDEDALQRA 177
Query: 288 LNLAGTMLGFYP---VRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
LNL G+ ++V +TA P ER+ + T+Y N+ ++ D
Sbjct: 178 LNLDGSAYEDDERCRLKVRRDQTANRRPPP--------ERKAGSLTVYAGNMGWDTSRDD 229
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTRIAF--VEFVMAESAIAALNCSGVVLGSLPIRVSP 402
V +F V LR D F VEF S AAL C+G +R+S
Sbjct: 230 VAAYFAEQGCAVANLRYHTDADTGNFRGFCHVEFEDEASLEAALACAGTKWRGRDLRISH 289
Query: 403 SKT 405
S+T
Sbjct: 290 SET 292
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLL 207
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALN 289
VYV +IDQ T+E+ LF G++ + D S F F+ FT E A AA++
Sbjct: 237 VYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVD 294
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEF---TDEEGARAA 287
++YV D+ VTE L F G ++ R+C D L +A++ F E A
Sbjct: 46 SLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEWVLAT 105
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
+NL ++ P+R++ S+ R +R+ ++ N++K + D K
Sbjct: 106 MNL--DVIKGNPIRIMWSQ------------RDPGQRKRGVGNVFVKNLEKSI---DNKA 148
Query: 348 FFE--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ S G + +++ D + S FV F ESA A+ +G++L +L + V
Sbjct: 149 LYDTFSTFGRILSCKVISDENGSKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFV 204
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLL 208
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
VYV +IDQ TEE+ LF G++ + D S F F+ FT + A AA+
Sbjct: 238 VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAV 294
>gi|66800163|ref|XP_629007.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996426|sp|Q54BM2.1|PAP1A_DICDI RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein, cytoplasmic 1-A
gi|60462370|gb|EAL60591.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 565
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAA 287
I ++YV D+ +V+E+ L +F G V + R+C D N+ L +A++ + + A A
Sbjct: 8 ISSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERA 67
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L+ L P+R + + +P+ R+ ++ N+DK + D K
Sbjct: 68 LD----TLNNTPIRGKACRIMWSQRDPSL-------RKSGVGNVFIKNLDKGI---DHKA 113
Query: 348 FFE--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPS 403
++ S G + +++ D +S++ FV + ESA A+ +G+++ + V P
Sbjct: 114 LYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPF 173
Query: 404 KT 405
K+
Sbjct: 174 KS 175
>gi|405970795|gb|EKC35670.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 462
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G V+ R+C D L +A++ F A AL+
Sbjct: 17 SLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAYVNFQQPADAERALD- 75
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+ F ++ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 76 ---TMNFDTIKGRPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKALYD 122
Query: 351 --SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA-IAALNCSGVVL 393
S G + +++ D H S FV F E+A IA +G++L
Sbjct: 123 TFSAFGNILSCKIVCDEHGSRGYGFVHFETEEAARIAIEKVNGMLL 168
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC 264
RR + F + R LA++EE R+VYV ++D + T EQL F G + I
Sbjct: 10 RRTQKFPETDEERAER--LAKQEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTIL 67
Query: 265 GDPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
D S L +A++EF + E A++L G +RV P +T I
Sbjct: 68 FDKYSGLPKGYAYVEFENIESVNKAVDLHGKEFRGREIRVSPKRTNI 114
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 317 LPRTEDER--------EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHS 368
P T++ER E +R++Y N+D K T ++ FF V G + R+ +L D +
Sbjct: 15 FPETDEERAERLAKQEEADSRSVYVGNVDYKATPEQLEEFFRPV-GVIDRVTILFDKYSG 73
Query: 369 --TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A+VEF ES A++ G IRVSP +T
Sbjct: 74 LPKGYAYVEFENIESVNKAVDLHGKEFRGREIRVSPKRT 112
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYG 142
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 143 FVHFETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 192
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +T +K FE G + +++ +R +AF + AE A+
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKY-GTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 386 LNCSGVVLG 394
LN + G
Sbjct: 252 LNGKDISEG 260
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ +TE L F G V+ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRV 400
+ S G + ++ D +++ FV F E+A +++ +G++L + V
Sbjct: 117 DTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYV 171
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++Y D+ VTE L +F G V R+C D SV R +A+I F + A AL
Sbjct: 49 SLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRD--SVTRKSLGYAYINFHNVADAERAL 106
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + P++ P + + +P R A +Y N+D+ + D K
Sbjct: 107 D----TLNYSPIKGRPCRLMWSHRDPAL-------RRSGAGNVYVKNLDRNI---DNKAL 152
Query: 349 FE--SVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSK 404
++ S+ G + ++ L S FV F ESA AA+ +G+ +G + V+P K
Sbjct: 153 YDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFK 212
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF G V R+C D + L +A++ F + E+G +A
Sbjct: 81 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 140
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+M ++ N+D + + F
Sbjct: 141 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 188
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
S G++ ++ D ++ FV F ESA AA+ + +G++L
Sbjct: 189 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLL 233
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 18/196 (9%)
Query: 213 GKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD----PN 268
G ++MN + +I ++V I + +E+QL LF G V + + D P
Sbjct: 35 GSKKMNGSLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPP 94
Query: 269 SVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA 328
F+ + + A A N + +++LP + P +E +
Sbjct: 95 QSKGCCFVTYYTRKSALEAQN------ALHNMKILPGMHHPIQMKPA---DSEKNNAVED 145
Query: 329 RTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAA 385
R ++ I KK + D++L F S G++ R+L +R AFV F MA+SAI +
Sbjct: 146 RKLFVGMISKKCNENDIRLMF-SPYGQIEECRILRGPDGLSRCAFVTFTARQMAQSAIKS 204
Query: 386 LNCSGVVLG-SLPIRV 400
++ S + G S PI V
Sbjct: 205 MHQSQTMEGCSSPIVV 220
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN-SVLRFAFIEFTDEEGARAA---LN 289
VYV ++ + T E L LF G + +I D N + RF F+ F + A A LN
Sbjct: 202 VYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKLN 261
Query: 290 LAGTMLG--FYPVRVLPSKTAIAPVNPTF----LPRTEDEREMCARTIYCTNIDKKVTQA 343
+ T G + R A + F L R E + +Y NIDK + +
Sbjct: 262 GSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYE---KFQGANLYLKNIDKSLNEE 318
Query: 344 DVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
+K F S G + +++ D ++ + FV F E A A++ +G ++G P+ VS
Sbjct: 319 KLKELF-SEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYVS 377
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD- 280
L + E+ +Y+ +ID+ + EE+L LF G + C++ D + F+ FT
Sbjct: 295 LKRYEKFQGANLYLKNIDKSLNEEKLKELFSEFGTITSCKVMSDARGRSKGVGFVAFTTP 354
Query: 281 EEGARAALNLAGTMLGFYPVRV 302
EE ++A + G ++G PV V
Sbjct: 355 EEASKAIDEMNGKIIGQKPVYV 376
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTD-EEGARAALN 289
++YV D+ V + QL LF V+ R+C D S L + ++ +++ + A A N
Sbjct: 26 SLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAMEN 85
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L P+R++ F R R+ ++ N++ T D K
Sbjct: 86 LNYVPLNGKPIRIM------------FSHRDPLIRKTGFANLFIKNLE---TSIDNKALH 130
Query: 350 E--SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL 386
E SV G V ++ D + HS FV+F +SA A+
Sbjct: 131 ETFSVFGNVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAI 170
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 299 PVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYR 358
PVR+ KT I P++ T +ER+ ART++C + ++ D++ FF +V G+V
Sbjct: 125 PVRL--DKTFIQPIDNL----TPEERD--ARTVFCMQLAARIRARDLEDFFSAV-GKVRD 175
Query: 359 LRLLGDYH--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
+R++ D + S IA++EFV + S A+ +G L +PI V S+
Sbjct: 176 VRIISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQ 223
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
EE RTV+ + ++ L F G+V D RI D NS A+IEF +
Sbjct: 142 EERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSV 201
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-IYCTNIDKKVTQA 343
A+ L G L P+ V S+ A N ++ +Y ++ +T+
Sbjct: 202 PLAIGLTGQRLLGVPIIVQASQ---AEKNRAAAAANNLQKGSSGPMRLYVGSLHFNITEE 258
Query: 344 DVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
++ FE G++ ++L+ D S F+ F AE A AL +G L P++V
Sbjct: 259 MLRGIFEPF-GKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV 317
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ + TE+ L F G V+ RIC D L +A++ F A+ AL+
Sbjct: 11 SLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDT 70
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-----TIYCTNIDKKVTQAD 344
+ ++ P+R++ S +R+ C R ++ N+D+ V D
Sbjct: 71 MNFDVIKGRPIRLMWS-----------------QRDACLRRSGIGNVFVKNLDRSV---D 110
Query: 345 VKLFFE--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVS 401
K +E S G++ +++ D S AFV F +A A+ +G V+ P+ V+
Sbjct: 111 NKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVA 170
Query: 402 PSKTPVRPRAPRL 414
P K P + R L
Sbjct: 171 PFK-PRKDREAEL 182
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 16/122 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +RR+ V+V ++D+ V + L F G G+++ ++ D +AF
Sbjct: 82 RLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAF 141
Query: 276 IEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
+ F + A A+ + G ++ PV V P F PR + E E+ +R T
Sbjct: 142 VHFQSQSAANCAIEQMNGKVINDRPVFVAP-----------FKPRKDREAELRSRASEFT 190
Query: 335 NI 336
N+
Sbjct: 191 NV 192
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 106 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 165
Query: 275 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 166 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKANF 214
Query: 330 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y NI +VT + + F + G+V L D +R FV F E+A A+
Sbjct: 215 TNVYVKNIANEVTDDEFRDLF-AAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 272
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + A F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 111 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 170
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 171 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEDD 221
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 222 IKSVFEAFGPILYCKLAQGTSVHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 279
Query: 401 SPSKTP 406
S TP
Sbjct: 280 GRSITP 285
>gi|268570897|ref|XP_002640866.1| Hypothetical protein CBG15757 [Caenorhabditis briggsae]
Length = 296
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RTVYV++I +VTE+ L LF+ G +V +S RFA +EF DEE A+ +
Sbjct: 10 RTVYVANITPEVTEDMLEELFLQAGPLVKVITRNVRDSTARFALVEFEDEESVIFAIKI- 68
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPT 315
+ +R+ + + P N T
Sbjct: 69 -----LHGIRLFDREIQVKPRNNT 87
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLR 272
NS S + E+ R+VYV ++D T ++L A F GCG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 273 FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
FA+IEF + AA+ L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAFEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKMEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNL 290
EF D+E R A+ L
Sbjct: 145 EFADKESVRTAMAL 158
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 311 PVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HS 368
PV P + E++ E R+IY N+D T +++ F CG V R+ +L D + H
Sbjct: 81 PVGPVIM-SIEEKMEADGRSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHP 138
Query: 369 TRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
A++EF ES A+ + I+V +T
Sbjct: 139 KGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRT 175
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 112 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 159
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 160 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 204
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 16/176 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 RIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 182
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A IY
Sbjct: 183 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFDEMKANFTNIY 235
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
NID VT+ + + FE GE+ L D +R FV + ESA AA++
Sbjct: 236 IKNIDPDVTEEEFRKIFEQF-GEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVD 290
>gi|357129961|ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTDEEG 283
RE+ I++ VYV I +E+ + + F GCG + +DC + A + F +
Sbjct: 187 REQSIKK-VYVGGIPYYSSEDDIRSFFEGCGSITALDCMTFPESGKFRGIAILTFKTDAA 245
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA-------RTIYCTNI 336
A+ AL L G +G + ++V P K V ++ E+E A IY N+
Sbjct: 246 AQRALALDGADMGGFFLKVQPYKANREKV------KSNHEKEDFAPKMIEGYNRIYVGNL 299
Query: 337 DKKVTQADVKLFFESVCGEVYRLRL-----LGDYHHSTRIAFVEFVMAESAIAALNCSGV 391
+T+ D++ FF S C ++ +R GD+ A V+F S A+
Sbjct: 300 AWDITEVDLRKFF-SDC-KISSIRFGTDKETGDFKG---FAHVDFSDGTSLAVAMKLDQN 354
Query: 392 VLGSLPIRV 400
V+ P+R+
Sbjct: 355 VIKGRPVRI 363
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR---FAFIEFTDEEG 283
EE RTV+V + ++ + L F G++ D R+ D N R A++EF + E
Sbjct: 74 EERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVES 132
Query: 284 ARAALNLAGTMLGFYPVRVLPSKTAIAPVN--PTFLPRTEDEREMCARTIYCTNIDKKVT 341
A+ AL L GT L P+++ S +N P+ T+ R +Y ++ +T
Sbjct: 133 AQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNRG--PMKLYIGSLHYNIT 190
Query: 342 QADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPI 398
+ +K FE G++ ++L+ D S FV + ++ A AL+ +G L P+
Sbjct: 191 EEMLKGIFEPF-GKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNGFELAGRPM 249
Query: 399 RV 400
+V
Sbjct: 250 KV 251
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFV 377
T +ER+ ART++ + ++ Q D++ FF SV G++ +RL+ D S IA+VEF
Sbjct: 72 TPEERD--ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIMDNKTKRSKGIAYVEFR 128
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPS 403
ESA AL +G L +PI++ S
Sbjct: 129 EVESAQLALGLTGTRLLGVPIQIQQS 154
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESA 382
E ART++C + +K+ D++ FF SV G V +RL+ D + S IA+VEF S
Sbjct: 155 ERDARTVFCWQLSQKIRPRDMEEFFSSV-GIVRDVRLISDRNSRRSKGIAYVEFQDKNSV 213
Query: 383 IAALNCSGVVLGSLPIRVSPSK 404
AL SG L S+PI V S+
Sbjct: 214 PLALGLSGQKLLSIPIMVQASQ 235
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
EE RTV+ + Q++ + F G V D R+ D NS A++EF D+
Sbjct: 154 EERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSV 213
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAI--APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
AL L+G L P+ V S+ A N L + +Y ++ +T+
Sbjct: 214 PLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNS----GPMRLYVGSLHFNITE 269
Query: 343 ADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIR 399
++ FE G++ ++L+ D S F+ F AE A AL +G L P++
Sbjct: 270 EMLRGIFEPF-GKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMK 328
Query: 400 V 400
V
Sbjct: 329 V 329
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRF 273
S + + EE+ RR+VYV ++D T E+L A F CG + + C + G P F
Sbjct: 59 SASEVPSSEEVDRRSVYVGNVDYGSTPEELQAHFKECGTINRVTILCDKFTGHPKG---F 115
Query: 274 AFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
A+IEF EEGA A+ L ++ ++V +T + ++ T
Sbjct: 116 AYIEFATEEGANNAVILNESLFRGRNLKVSIKRTNVPGISTT 157
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
+L ++ E+ R++YV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 111 TLEEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKG---FAYI 167
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
EFTD++ + A+ L ++ ++V+ +T ++ T P
Sbjct: 168 EFTDKDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTNRP 209
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 236 VSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV---LRFAFIEFTDEEGARAALNLAG 292
V+ + Q +TE ++ ++F G + CR+ D F F+ + +EE A+ A+
Sbjct: 86 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 143
Query: 293 TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFES- 351
L YP+R K + A P+++D +E +Y TN+ + +T+ + + F
Sbjct: 144 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 192
Query: 352 ---VCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALN 387
V + R +L G +AFV F A+ AI+ALN
Sbjct: 193 GTIVQKNILRDKLTG---QPRGVAFVRFNKREEAQEAISALN 231
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 137 FKRDM--RELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNAR 194
+DM RE+ +FS + P+ + L +T G++ GF N L N A
Sbjct: 89 LPQDMTEREMYSMFSAMGPIESCRLMRDLKQT--------GYSYGFGFVNYL---NEEA- 136
Query: 195 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVG 254
A A++ + +R+ + Q ++I +Y++++ + +TEEQL +F
Sbjct: 137 -----AQRAIKCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGK 191
Query: 255 CGQVVDC-----RICGDPNSVLRFAFIEFTDEEGARAALN 289
G +V ++ G P V AF+ F E A+ A++
Sbjct: 192 YGTIVQKNILRDKLTGQPRGV---AFVRFNKREEAQEAIS 228
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR----FAFIEFTDEEGARAAL 288
++Y D+ VTE L +F G V R+C D SV R +A+I F + A AL
Sbjct: 49 SLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRD--SVTRKSLGYAYINFHNVADAERAL 106
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
+ L + P++ P + + +P R A +Y N+D+ + D K
Sbjct: 107 D----TLNYSPIKGRPCRLMWSHRDPAL-------RRSGAGNVYVKNLDRNI---DNKAL 152
Query: 349 FE--SVCGEVYRLRL-LGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSK 404
++ S+ G + ++ L S FV F ESA AA+ +G+ +G + V+P K
Sbjct: 153 YDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFK 212
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
+T++V ++ V +EQ+ F G+VVD R + R F +EF E A+ AL L
Sbjct: 436 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 495
Query: 291 AGTMLGFYPVR--VLPSKTAIAPV----NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
AG L PVR + + A P N +F + + TI+ D T D
Sbjct: 496 AGHDLMGRPVRLDLARERGAYTPGSGRDNSSF----KKPAQSSGNTIFIKGFD---TSLD 548
Query: 345 VKLFFESV------CGEVYRLRLLGDYH 366
+ S+ CGE+ R+ + DY
Sbjct: 549 IHQIRNSLEEHFGSCGEITRVSIPKDYE 576
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 106 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDNAIDNKALHDTF 153
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 154 -AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLL 198
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 117 RIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGYG 176
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A IY
Sbjct: 177 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNIY 229
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
NID ++T + ++ FE+ GE+ L D +R FV + ESA AA+
Sbjct: 230 IKNIDLEITDDEFRVMFEAF-GEITSATLSHDQDGKSRGFGFVNYANHESAEAAV 283
>gi|194747299|ref|XP_001956090.1| GF25032 [Drosophila ananassae]
gi|190623372|gb|EDV38896.1| GF25032 [Drosophila ananassae]
Length = 643
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 131 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 190
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 191 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 241
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 242 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 299
Query: 401 SPSKTPVRPRAPRLP 415
S TP P A +P
Sbjct: 300 GRSITP--PNALAVP 312
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF G V R+C D + L +A++ F + E+G +A
Sbjct: 67 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 126
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+M ++ N+D + + F
Sbjct: 127 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 174
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
S G++ ++ D ++ FV F ESA AA+ + +G++L
Sbjct: 175 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLL 219
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D + + L F G ++ C++ D N F F
Sbjct: 83 RIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDENGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A A+N ML + K + F R E E E+ AR + TN
Sbjct: 143 VHFETHEAANQAINTMNGML------LNDRKVFVG----HFKSRQEREAELGARALEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-N 387
I K + D+ +LF S G+ ++++ D + +R FV F E A A+ N
Sbjct: 193 IYVKNFEGDMDDECLQELF--SQFGKTLSVKVMVDENGQSRGFGFVNFEKHEEAQKAVSN 250
Query: 388 CSGVVLG 394
+G LG
Sbjct: 251 MNGKELG 257
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ ++ P+R++ S+ R R+ I+ N+D + D K +
Sbjct: 72 MNFEVIKGRPIRIMWSQ------------RDPGLRKSGIGNIFIKNLDDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ D + S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVVCDENGSRGFGFVHFETHEAANQAINTMNGMLL 163
>gi|340057933|emb|CCC52286.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 235 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 294
Y+ +ID+ VT E L +F CG +VDC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 295 LGFYPVRVLPSK 306
L ++V SK
Sbjct: 72 LAGRKIKVGISK 83
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 85 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 141
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 142 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 172
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 23/250 (9%)
Query: 164 AKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAV---RRKKSFGQGKRRMNSR 220
+K N HG GF GF + F H A +N + RK G K R
Sbjct: 128 SKVVYNEHGSRGF--GF-----VHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKRE 180
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFT 279
L R + +YV ++ V E++L LF G + ++ D N R F F+ F
Sbjct: 181 AELGARA-LGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFE 239
Query: 280 DEEGARAALN------LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RTEDEREMCARTIY 332
E A+ A++ ++G +L Y R + + F + E + +Y
Sbjct: 240 KHEEAQKAVDHMNGKEVSGQLL--YVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLY 297
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGV 391
N+D + +K F S G + +++ + HS FV F E A A+ +G
Sbjct: 298 VKNLDDSINDERLKEVF-STYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 392 VLGSLPIRVS 401
++G+ P+ V+
Sbjct: 357 IVGTKPLYVA 366
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L +F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ P+R++ S R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSH------------RDPGLRKSGMGNIFIKNLENSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ + H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLL 163
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNV- 198
D + LQ+LFS+ M S+ ++N GF F N F H V
Sbjct: 203 DEQRLQDLFSQFGNMQ------SVKVMRDSNGQSRGFG---FVN----FEKHEEAQKAVD 249
Query: 199 --NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQQVTEEQ 247
N + G+ ++R ++ L +R E +++ +YV ++D + +E+
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 248 LAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPVRV 302
L +F G + ++ + + F F+ F+ EE +A + G ++G P+ V
Sbjct: 310 LKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
>gi|294886819|ref|XP_002771869.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239875669|gb|EER03685.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 420
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
E I++RTVYVS + QVT E++ +F G++ + I P +FA +EF +E A+
Sbjct: 133 EMILKRTVYVSGLANQVTLEEVQGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEAAAQE 192
Query: 287 ALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
A+ + VRV SK + PT
Sbjct: 193 AIRVGEIPYRGRVVRVEKSKETVKLYPPT 221
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 36/215 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAG 292
T++V ++ Q E+ L LF +V++ +I P + LR+A ++F G AA +L G
Sbjct: 7 TIFVRNLAVQANEQNLRDLFSRLDRVINVQIMTFPGTSLRYARVDFGTSNGVTAAHSLNG 66
Query: 293 TMLGFYPVRV-----------------LP------------SKTAIAP------VNPTFL 317
P+ V LP S T+I P
Sbjct: 67 QPFHGVPLTVSVTDPVAANASATAAAPLPNLGVPAAQQLTASVTSIRPQPGVGVTTVGGG 126
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV 377
R E + RT+Y + + +VT +V+ F GE+ + + + A VEF
Sbjct: 127 VRDSGEEMILKRTVYVSGLANQVTLEEVQGMFGHF-GEIKESSIDVSPYDQCQFALVEFQ 185
Query: 378 MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAP 412
+A A+ + +RV SK V+ P
Sbjct: 186 NEAAAQEAIRVGEIPYRGRVVRVEKSKETVKLYPP 220
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGA 284
EE RTV+ + Q+V L F G+V D R+ C A+IEF D E
Sbjct: 237 EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESV 296
Query: 285 RAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVT 341
AL L+G L P+ V + K + P F P+ +Y ++ +T
Sbjct: 297 ALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKA----HTGPMRLYVGSLHFNIT 352
Query: 342 QADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPI 398
+ ++ FE G++ ++L+ D S F+ + A+ A AL +G L P+
Sbjct: 353 EDMLRGIFEPF-GKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPM 411
Query: 399 RV 400
+V
Sbjct: 412 KV 413
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESA 382
E ART++C + ++V D++ FF SV G+V +RL+ IA++EF ES
Sbjct: 238 ERDARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGIAYIEFEDPESV 296
Query: 383 IAALNCSGVVLGSLPI----------RVSPSKTPVRPRAPRLPM 416
AL SG L +PI R+ + P +P+A PM
Sbjct: 297 ALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM 340
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
+L ++ E+ R++YV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 111 TLEEKIEVDARSIYVGNVDYGATAEELEQHFHGCGSINRVTILCDKFSGHPKG---FAYI 167
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EFTD++ + A+ L ++ ++V+ +T
Sbjct: 168 EFTDKDSIQTAMALDESLFRGRQIKVMTKRT 198
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV-----VDCRICGDPNSVLRFAFIE 277
+ ++ E R++YV ++D T E+L A F GCG V + + G P FA+IE
Sbjct: 82 MEEKIEADSRSIYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKG---FAYIE 138
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 318
F D+E + A+ L ++ ++V P +T V+ T P
Sbjct: 139 FADKESVQTAMALDESLFRGRQIKVCPKRTNRPGVSTTNRP 179
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E++ E +R+IY N+D T +++ F CG V R+ +L D + H A++EF
Sbjct: 83 EEKIEADSRSIYVGNVDYCSTAEELEAHFHG-CGSVNRVTILTDKYTGHPKGFAYIEFAD 141
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
ES A+ + I+V P +T
Sbjct: 142 KESVQTAMALDESLFRGRQIKVCPKRT 168
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 23/250 (9%)
Query: 164 AKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANAAV---RRKKSFGQGKRRMNSR 220
+K N HG GF GF + F H A +N + RK G K R
Sbjct: 128 SKVVYNEHGSRGF--GF-----VHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKRE 180
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFT 279
L R + +YV ++ V E++L LF G + ++ D N R F F+ F
Sbjct: 181 AELGARA-LGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQSRGFGFVNFE 239
Query: 280 DEEGARAALN------LAGTMLGFYPVRVLPSKTAIAPVNPTFLP-RTEDEREMCARTIY 332
E A+ A++ ++G +L Y R + + F + E + +Y
Sbjct: 240 KHEEAQKAVDHMNGKEVSGQLL--YVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLY 297
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGV 391
N+D + +K F S G + +++ + HS FV F E A A+ +G
Sbjct: 298 VKNLDDSINDERLKEVF-STYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 392 VLGSLPIRVS 401
++G+ P+ V+
Sbjct: 357 IVGTKPLYVA 366
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L +F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ P+R++ S R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSH------------RDPGLRKSGMGNIFIKNLENSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ + H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGSILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLL 163
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 140 DMRELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNV- 198
D + LQ+LFS+ M S+ ++N GF F N F H V
Sbjct: 203 DEQRLQDLFSQFGNMQ------SVKVMRDSNGQSRGFG---FVN----FEKHEEAQKAVD 249
Query: 199 --NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQQVTEEQ 247
N + G+ ++R ++ L +R E +++ +YV ++D + +E+
Sbjct: 250 HMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDER 309
Query: 248 LAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPVRV 302
L +F G + ++ + + F F+ F+ EE +A + G ++G P+ V
Sbjct: 310 LKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYV 365
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 108
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 109 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 156
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 157 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 201
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 16/176 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 RIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 179
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 180 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 232
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
N+D+++++ + + FE GE+ L D +R FV + +SA AA++
Sbjct: 233 IKNLDQEISEEEFRQMFEKF-GEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVD 287
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 9/185 (4%)
Query: 215 RRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 271
RR + A+ E E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 171 RRFRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 230
Query: 272 R--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREM 326
+IEF D A+ L+G +L PV V PS K +
Sbjct: 231 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVTGPYGA 290
Query: 327 CARTIYCTNIDKKVTQADVKLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAA 385
R +Y N+ +T++ ++ FE E+ +L L + H FV+F E A AA
Sbjct: 291 VDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLETGHCKGFGFVQFTHLEHAKAA 350
Query: 386 LNCSG 390
+ +G
Sbjct: 351 QSLNG 355
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + ++E
Sbjct: 182 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 238
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
F A S A+ SG +L P+ V PS+
Sbjct: 239 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 268
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGA 284
+E +RTV+V + ++ ++L A F G V D +I D S ++EF +EE
Sbjct: 190 DERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESV 249
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART-------------- 330
A+ L G L P+ IA TE E+ AR
Sbjct: 250 PVAIQLTGQKLLGIPI--------IAQF-------TEAEKNKAARNAEGHVSGNQNSIPF 294
Query: 331 --IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL- 386
+Y NI +T++D++ FE GE+ ++L D + +R FV+F A AL
Sbjct: 295 HRLYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFVQFRDPNQAREALE 353
Query: 387 NCSGVVLGSLPIRV 400
+G L PIRV
Sbjct: 354 KMNGFDLAGRPIRV 367
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 106 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDNAIDNKALHDTF 153
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 154 -AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLL 198
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 117 RIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGYG 176
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A IY
Sbjct: 177 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNIY 229
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
NID ++T + + FE+ GE+ L D +R FV + ESA AA+
Sbjct: 230 IKNIDLEITDDEFRTMFEAF-GEITSATLSHDQDGKSRGFGFVNYANHESAEAAV 283
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 136 RIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYG 195
Query: 275 FIEF-TDEEGARAALNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
F+ + TDE A+A ++ G +L V V +P K R EM A
Sbjct: 196 FVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKANF 244
Query: 330 -TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y NI+ +VT+ + + F + GEV L D +R FV F SA A+
Sbjct: 245 TNVYVKNINHEVTEEEFRELF-AKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAV 302
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF-TDEEGARAALN 289
++YV ++D VTE L LF G V R+C D + L +A++ + + ++G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALEE 124
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 172
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +++ FV + E+A A+ + +G++L
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLL 217
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 10/181 (5%)
Query: 215 RRMNSRTSLAQRE---EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVL 271
RR + + + E E +RTV+V + + TE + F G+V D R+ D NS
Sbjct: 1 RRFKEKKEVVEPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 60
Query: 272 R--FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM--- 326
++EF D A+ L+G +L PV V PS+ V P+
Sbjct: 61 SKGVGYVEFYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFG 120
Query: 327 -CARTIYCTNIDKKVTQADVKLFFESV-CGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
R +Y N+ +T+ ++ FE E+ +L L + FV+F E+A A
Sbjct: 121 AVDRKLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLENAKA 180
Query: 385 A 385
A
Sbjct: 181 A 181
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + +VE
Sbjct: 12 PEADPERDQ--RTVFVYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYVE 68
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPS---KTPVRPRA 411
F A S A+ SG +L P+ V PS K V+P A
Sbjct: 69 FYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSA 107
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R++YV ++D T E+L A F GCG V + C + G P FA+I
Sbjct: 88 SIEEKIEADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYI 144
Query: 277 EFTDEEGARAALNLAGTML 295
EF D+E R A+ L ++
Sbjct: 145 EFADKESVRTAMALDESLF 163
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 126 RIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYG 185
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML +V K F+PR E E+E+ +
Sbjct: 186 FVHFETEEAANKSIDKVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLFT 235
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +T+ +K FE G + +++ +R +AF + AE A+
Sbjct: 236 NVYVKNFGEDMTEDKLKDMFEKY-GTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLE 294
Query: 386 LNCSGVVLG 394
LN + G
Sbjct: 295 LNGKEIAEG 303
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 27/191 (14%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF-TDEEGARAA 287
R + ++ + VTE L LF G + +I D + L + F+EF T EE ARA
Sbjct: 83 RNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARAI 142
Query: 288 LNLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
+ G ++V PS ++I N +Y N+ + +T+
Sbjct: 143 QAMNGRQYMNKRLKVSIARPSSSSITGAN-----------------LYIKNLPRTITEDQ 185
Query: 345 VKLFFESVCGEVYRLRLLGDYHHSTRIAFVEF---VMAESAIAALNCSGVVLGSLPIRVS 401
++ F GE+ RLL D IAFV F AE A+A LN + S PI V
Sbjct: 186 LRAIFNPF-GEIISARLLYDGDVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVK 244
Query: 402 PSKTPVRPRAP 412
+ T R RAP
Sbjct: 245 FADTNRRSRAP 255
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V +E L F G + D R+ D NS + F+ F TD E A A +
Sbjct: 109 VFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 289 NLAGTMLGFYPVRV------------------LPSKTAIAPVNPTFLPRTEDEREMCAR- 329
N G LG +RV A APVN P T + ++ A+
Sbjct: 169 N--GEWLGSRAIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGGPLTYE--QVLAQT 224
Query: 330 -----TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIA 384
T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E A
Sbjct: 225 APYNTTVYVGNLVPYTTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEHAAQ 279
Query: 385 AL-NCSGVVLGSLPIRVSPSK 404
A+ G ++ PI+ S K
Sbjct: 280 AIVQLQGQMVHGRPIKCSWGK 300
>gi|221058210|ref|XP_002261613.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247618|emb|CAQ41018.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 584
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
++ + +Y+ ++ E+ + ALF G ++ + + AF+EFT+EE A+AA
Sbjct: 157 DVFSKIIYMENVPPNCREDDIKALFKNVGTTTSYKLHYNEQKKVNTAFVEFTNEEHAKAA 216
Query: 288 LNLAGTMLG 296
L+L GT +G
Sbjct: 217 LHLNGTKIG 225
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
I VYV ++ VTE+ + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 290 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 316
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISHNPPF 91
>gi|340374250|ref|XP_003385651.1| PREDICTED: cleavage stimulation factor subunit 2-like [Amphimedon
queenslandica]
Length = 315
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE 281
A RE+ +R +++V++I + TE+Q+ A+ G V+ ++ DP S F F E+ D
Sbjct: 16 AHREKAMR-SIFVANIAFETTEDQMRAVLSEVGPVLSLKLIQDPVSGKPRGFGFCEYEDA 74
Query: 282 EGARAAL-NLAGTMLGFYPVRV 302
E AR+A NLAG L P+R+
Sbjct: 75 ETARSACRNLAGRELNGRPLRI 96
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD 280
S REE RR+V+V ++D +E L F CG V I P + FA++EFTD
Sbjct: 111 SQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITIGRGPTGQPKGFAYVEFTD 170
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAI 309
E A L ML V VL +T +
Sbjct: 171 EAAVETAKGLTNQMLKGRQVTVLNKRTNV 199
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV ++D VTE L +F GQV R+C D S L +A++ F AL
Sbjct: 48 SLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALE- 106
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L + P++ + + +P+ R + I+ N+ + + F
Sbjct: 107 ---ELNYTPIKGKACRIMWSQRDPSL-------RRNGSGNIFIKNLHPAIDNKTLHDTF- 155
Query: 351 SVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G++ ++ D + +++ FV + +ESA AA+ N +G++L + V P
Sbjct: 156 SAFGKILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGP 209
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
SL + E+ R++YV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 90 SLEDKMEVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF + + + A+ + +M ++V+P +T
Sbjct: 147 EFAERDSVQTAMAIDESMFRGRQIKVMPKRT 177
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 310 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--H 367
+P+N + ED+ E+ R+IY N+D T +++ F CG + R+ +L + H
Sbjct: 85 SPLNMSL----EDKMEVDNRSIYVGNVDYGATAEELEQHFHG-CGSINRVTILCNKFDGH 139
Query: 368 STRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT-----PVRPRAPR 413
A++EF +S A+ + I+V P +T V R PR
Sbjct: 140 PKGFAYIEFAERDSVQTAMAIDESMFRGRQIKVMPKRTNRPGLSVTNRGPR 190
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 90/216 (41%), Gaps = 41/216 (18%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V +E L F G + D R+ D NS + F+ F TD E A A +
Sbjct: 107 VFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 166
Query: 289 NLAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRTED----ERE 325
N G LG +RV P T A AP+N P + D +
Sbjct: 167 N--GEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTP 224
Query: 326 MCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE-SAIA 384
T+Y N+ TQAD+ F+S+ G + +R+ D AFV+ E +A+A
Sbjct: 225 SYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEHAAMA 279
Query: 385 ALNCSGVVLGSLPIRVSPSK-----TPVRPRAPRLP 415
+ G ++ PI+ S K T +P P P
Sbjct: 280 IVQLQGQMVHGRPIKCSWGKDRADGTTAQPGGPLSP 315
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVL 393
+ S G + +++ D + S FV F E+A A++ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLL 163
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A A++ + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N + +K F G ++++ D + ++ FV F E A A++
Sbjct: 192 NVYIKNFGDDMNDERLKEMF-GKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVD 249
>gi|115461723|ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza sativa Japonica Group]
gi|52353509|gb|AAU44075.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|222629967|gb|EEE62099.1| hypothetical protein OsJ_16883 [Oryza sativa Japonica Group]
Length = 548
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTD 280
L++ E + VYV I +E+ + + F CG + VDC + A + F
Sbjct: 165 LSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKT 224
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
+ A+ AL L G +G + +++ P K+ + F P+ + +Y N+ +
Sbjct: 225 DAAAQRALALDGADMGGFFLKIQPYKSVREKED--FAPKMIEGYNR----VYVGNLAWDI 278
Query: 341 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF--VEFVMAESAIAALNCSGVVLGSLPI 398
T+ D+K FF S C ++ +R D + V+F S A+ V+ P+
Sbjct: 279 TEDDLKKFF-SDC-KISSIRFGTDKETGDFKGYVHVDFSEGTSVAVAMKLDQKVIKGRPV 336
Query: 399 RV 400
R+
Sbjct: 337 RI 338
>gi|389632927|ref|XP_003714116.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
gi|351646449|gb|EHA54309.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
Length = 867
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 31/270 (11%)
Query: 141 MRELQELFSKLNPMAEEFVPPS----LAKTNNNNHGVNGFNGGFFAN--NSLIFNNHNAR 194
+ EL++ F + P+ +PPS + + ++ H F ++ +SL++ +
Sbjct: 542 LDELKKTFEEYGPLTRVLMPPSATIAIVQFSHAAHAKTAFKKLAYSKFKSSLLYLEMAPK 601
Query: 195 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR----TVYVSDIDQQVTEEQLAA 250
+ N V + QGK+++ S T L +R++ + +++V ++ T E+LA
Sbjct: 602 DVFKN----VPEPTAQEQGKQKL-SVTELLERDDAEEQGETTSLFVKGLNFATTTEKLAE 656
Query: 251 LFVGCGQVVDCRI-----CGDPNSVLR--FAFIEFTDEEGARAALNLAGTM-LGFYPVRV 302
F V R+ P VL F F+EF +E A+AAL + L + + V
Sbjct: 657 TFQSLEGFVSARVKTKTDPKKPGQVLSMGFGFVEFRSKELAQAALKVMDNYNLEGHTLTV 716
Query: 303 LPSKTAIAPVNPTFLPRTED--EREMCART-IYCTNIDKKVTQADVKLFFESVCGEVYRL 359
S + R ED +++ RT I N+ + T+ DV+ F G++ +
Sbjct: 717 RASHRGLDAAEER---RREDKAKKQAGQRTKIVVKNLPFEATKKDVRTLF-GTYGQLRSV 772
Query: 360 RLLGDYHHSTR-IAFVEFVMAESAIAALNC 388
R+ ++ + TR AF EF + A ALN
Sbjct: 773 RVPKNFENRTRGFAFAEFTTPKEAENALNA 802
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMA 379
D+ E+ AR++Y N++ TQ D+ +F+S CG V R+ +L D H +VEFV
Sbjct: 77 DQEEIDARSVYVGNVEYTSTQEDILAYFQS-CGTVNRITILNDKTTGHPKGCCYVEFVDR 135
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKT 405
ES AL + + I+V+ +T
Sbjct: 136 ESVQNALVLNDTTFNNRQIKVTAKRT 161
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 205 RRKKSFGQGKRRMN------SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV 258
RR K + +++N +EEI R+VYV +++ T+E + A F CG V
Sbjct: 51 RRYKEMEEETKKLNELQNSVDSNGFGDQEEIDARSVYVGNVEYTSTQEDILAYFQSCGTV 110
Query: 259 -----VDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
++ + G P ++EF D E + AL L T ++V +T +
Sbjct: 111 NRITILNDKTTGHPKGC---CYVEFVDRESVQNALVLNDTTFNNRQIKVTAKRTNL 163
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
ML P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMLKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ D H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETYEAAQQAINTMNGMLL 163
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A+ A+N ML + K + F R E E+ AR + TN
Sbjct: 143 VHFETYEAAQQAINTMNGML------LNDRKVFVG----HFKSRRERAAELGARALEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
I K ADV LF S G++ ++++ D +R FV F E A A+
Sbjct: 193 IYVKNLPADVDEQGLQDLF--SQFGKMLSVKVMRDSSGRSRCFGFVNFEKHEEAQKAV 248
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP--NSVLRFAFIEFTDEEGARAALNL 290
++YV D++ V E QL LF QVV R+C D + L +A++ F++ + A A+ L
Sbjct: 24 SLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDAANAMEL 83
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ + ++ +P+ R+ ++ N+D + ++ F
Sbjct: 84 ----LNFTPLNGKAIRIMVSHRDPSM-------RKSGHANVFIKNLDTSIDNKALQETFA 132
Query: 351 SVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALN 387
S G V ++ D + S FV+F E+A +A+N
Sbjct: 133 SF-GPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAIN 169
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R ++ R+ +R++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 95 RIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGPVLSCKVAVDNNGQSKGYG 154
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCT 334
F++F +EE A++A+N ML + K R E +Y
Sbjct: 155 FVQFENEEAAQSAINRLNGML-------INDKEVFVGRFVRHQERIEATGSPKFTNVYVK 207
Query: 335 NIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
N+ + + D+K FF + + + S FV F +SA AA+
Sbjct: 208 NLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAV 259
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEYVETALAMNETLFRGRQIKVMSKRT 173
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVL 393
+ S G + +++ D + S FV F E+A A++ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLL 163
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A A++ + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N + +K F G ++++ D + ++ FV F E A A++
Sbjct: 192 NVYIKNFGDDMNDERLKEMF-GKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVD 249
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 225 QREEIIR-----RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIE 277
QR E+ + RTV+V+++ ++ E + F G+V D RI D N+ A++E
Sbjct: 123 QRRELEKLDRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVE 182
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-------- 329
F D++ AL L G L + V KT+ A N + ++++ A
Sbjct: 183 FADKKFIHPALELTGQELNGQAIAV---KTSEAEKNIAWEAEQAQKKKLGASYGQGVPYI 239
Query: 330 ------TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHST----RIAFVEFVMA 379
+ + +++ DVK FE GE+ + ++ D AFV+F +
Sbjct: 240 ASAGPCKLRVGGLHLGLSEDDVKAVFEPF-GELDFISMIKDDDPGAAGKFASAFVQFKLT 298
Query: 380 ESAIAALN-CSGVVLGSLPIRVSPSKTPVRPRA 411
+ A+ AL+ +G+ L +PIRVS + V+ A
Sbjct: 299 QHAMLALSQLNGLELVGIPIRVSIASQGVQAAA 331
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ VTE L F+ G ++ R+C D + LR+A+I F A AL+
Sbjct: 12 SLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ ++ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEVIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ D H S FV F E+A A++ +G++L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAISTMNGMLL 163
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A+ A++ ML + K + F R E E E+ AR + TN
Sbjct: 143 VHFETHEAAQQAISTMNGML------LNDRKVFVG----HFKSRREREAELRARAMEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL 386
I K Q D+ LF S G++ ++++ D + HS FV F E A A+
Sbjct: 193 IYVKNLQVDMDEQGLQDLF--SQFGKLLSVKVMKDNNGHSRGFGFVNFEKHEEAQKAV 248
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 28/182 (15%)
Query: 136 DFKRDMRE--LQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNA 193
+ + DM E LQ+LFS+ + S+ +NN GF F N F H
Sbjct: 197 NLQVDMDEQGLQDLFSQFGKLL------SVKVMKDNNGHSRGFG---FVN----FEKHEE 243
Query: 194 RNGNV---NANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR---------TVYVSDIDQ 241
V N R+ G+ ++R+ + L ++ E +++ +YV ++D
Sbjct: 244 AQKAVMDMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDD 303
Query: 242 QVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTD-EEGARAALNLAGTMLGFYPV 300
+ +E+L F G + ++ + F F+ F+ EE +A + G ++G P+
Sbjct: 304 SIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPL 363
Query: 301 RV 302
V
Sbjct: 364 YV 365
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++Y D+D TE QL LF G VV R+C D L +A++ F ++GA AA +
Sbjct: 21 SLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNF--QQGADAARAI 78
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
+L F V P + + +P R+ I+ N+DK++ D K ++
Sbjct: 79 --DVLNFNVVNGKPIRIMYSQRDPAL-------RKSGVGNIFIKNLDKEI---DNKALYD 126
Query: 351 SVC--GEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
+ G + ++ D ++ FV+F E+A A++ +G++L + V P
Sbjct: 127 TFSQFGNIVSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGP 182
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 143 ELQELFSKLNPMAEEFVPPSLAKTNNNNHGVNGFNGGFFANNSLIFNNHNARNGNVNANA 202
+L ELFS + P+ V L + + F G A ++ N N NG
Sbjct: 35 QLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAARAIDVLNFNVVNGK----- 89
Query: 203 AVRRKKSFGQGKRRMNSRTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQV 258
R +QR+ +R++ +++ ++D+++ + L F G +
Sbjct: 90 ---------------PIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFSQFGNI 134
Query: 259 VDCRICGDPNSVLR-FAFIEFTDEEGARAALNLAGTML 295
V ++ D V + + F++F ++E A+ A++ ML
Sbjct: 135 VSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGML 172
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTD-EEGA 284
E++ +Y+ +++ V + +L LF G + CR+ D + R AF+ F+ +E
Sbjct: 296 EKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEAT 355
Query: 285 RAALNLAGTMLGFYPVRV 302
RA + G M G P+ V
Sbjct: 356 RAVTEMNGKMAGTKPLYV 373
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 118/283 (41%), Gaps = 30/283 (10%)
Query: 147 LFSKLNPMAEEFVPPSLAKTNNNNHGVNG----------FNGGFFANNSLIFNNHNA--- 193
LF K +A EF+P + N V G GG L + A
Sbjct: 3 LFGKGESIASEFLPGPIYDLNQTGALVPGPGAKSALVSVLGGGL---PKLTSDQEEAVKK 59
Query: 194 --RNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRT--VYVSDIDQQVTEEQLA 249
+ + V K++ +++M S+ + QR++ + VYV I ++ E+ +
Sbjct: 60 AKKYAMEQSIKMVLMKQTLAHQQQQMASQRNQVQRQQALALMCRVYVGSISFELKEDTIR 119
Query: 250 ALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSK 306
F+ G + + DP + FAF+E+ E A+ AL + G M+G ++V +
Sbjct: 120 QAFLPFGPIKSINMSWDPVTQKHKGFAFVEYDIPEAAQLALEQMNGVMIGGRNIKV--GR 177
Query: 307 TAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH 366
+ P + +E + R IY +I +T+ D++ FE+ G + +L +
Sbjct: 178 PSNMPQAQAVIDEITEEAKHYNR-IYVASIHSDLTEQDIQSVFEAF-GSIKYCKLAQGHA 235
Query: 367 HSTR--IAFVEFVMAESAIAALNCSGVV-LGSLPIRVSPSKTP 406
+ F+E+ +SA+ A+ + LG +RV + TP
Sbjct: 236 PNKHKGYGFIEYETLQSALEAIGSMNLFDLGGQYLRVGRAITP 278
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
V+V D+ +V ++ LA F G + D R+ D NS + F+ F TD E A A +
Sbjct: 109 VFVGDLSPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 289 NLAGTMLGFYPVRV-------------------LPSKT----AIAPVN----PTFLPRTE 321
N G LG +RV P++T A AP+N P
Sbjct: 169 N--GEWLGSRAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLSYESVV 226
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAE- 380
+ T+Y N+ TQ+D+ F+S+ G + +R+ D AFV+ E
Sbjct: 227 QQTPAFNTTVYVGNLVPYCTQSDLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEH 281
Query: 381 SAIAALNCSGVVLGSLPIRVSPSK 404
+A+A + G ++ PI+ S K
Sbjct: 282 AAMAIVQLQGQLVHGRPIKCSWGK 305
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN- 289
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ ++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVL 393
+ S G + +++ D + S FV F E+A A++ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLL 163
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A A++ + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFVG-----------RFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN 387
+Y N + + +K F + + D S FV F E A A++
Sbjct: 192 NVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDSGKSKGFGFVSFERHEDAQKAVD 249
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
K A++ P E++ + AR++Y N+D K T ++++ F +VCG+V R+ + D
Sbjct: 23 KQALSASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHF-AVCGKVARVTIPKDK 81
Query: 366 H--HSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
+ AFVEF ES AL SG + + I V+ +T
Sbjct: 82 FTGYQKNFAFVEFQKLESVQLALVLSGTMFRNRKIMVTLKRT 123
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEE 282
++E+ R+VYV ++D + T ++ F CG+V I D + + FAF+EF E
Sbjct: 39 EQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLE 98
Query: 283 GARAALNLAGTML 295
+ AL L+GTM
Sbjct: 99 SVQLALVLSGTMF 111
>gi|85090720|ref|XP_958552.1| hypothetical protein NCU09048 [Neurospora crassa OR74A]
gi|28919924|gb|EAA29316.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1105
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T++V++ + E+ + LF CG + R N+ RF ++ F D A AA L
Sbjct: 703 TLFVTNYPPEADEQSIRDLFKQCGDIHSIRFPSLKYNTKRRFCYVSFRDRSAAAAATQLD 762
Query: 292 GTML--GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
G L G Y ++ S V +ERE+ + N+ + ++ DV+ F
Sbjct: 763 GKPLEGGKYKLQAKLSDPGHRQVRQG---AQAEEREL-----HVNNLPRAASEEDVEGLF 814
Query: 350 ESVCGEVYRLRLLGDYHH-STRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSPSKTPV 407
+ G V +RL + ST AFV E A A+ V+ G+ P++V SK P
Sbjct: 815 QK-AGNVVSVRLTRNMAGVSTGTAFVVMETKEQAAKAIEILDKVIFGNHPLKVEVSKPPT 873
Query: 408 R 408
R
Sbjct: 874 R 874
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-----FAFIEFTDEEGARAA 287
T+Y+ ++D QV ++ L LFV CG V R P L + F+EFT+E A A
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPV---RTVSVPRDKLTGNHQGYGFVEFTNEVDADYA 86
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVK 346
L L M+ Y + +K+A +D R I+ N+D V + +
Sbjct: 87 LKLM-NMVKLYGKSLRLNKSA------------QDRRNFDVGANIFLGNLDPDVDEKTIY 133
Query: 347 LFFESVCGEVYRLRLLGDYHHSTR-----IAFVEFVMAESAIAALNCSGVVLGSLPIRVS 401
F S G + +++ D ++F F +++A+AA+N G + + PI VS
Sbjct: 134 DTF-STFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAAMN--GQFICNRPIHVS 190
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 28/183 (15%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 116 RIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYG 175
Query: 275 FIEFTDEEGARAALNLAGTML--------GFYPVRVLPSKTAIAPVNPTFLPRTEDEREM 326
F+ + E A A+ ML G + R S+ R EM
Sbjct: 176 FVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRE-----------RQSKLEEM 224
Query: 327 CAR--TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAI 383
A+ IY N+D +VTQ D FE G V + D +R FV F E A
Sbjct: 225 KAQFTNIYVKNLDPEVTQDDFVKLFEQF-GNVTSAVIQTDEQGQSRGFGFVNFETHEEAQ 283
Query: 384 AAL 386
A+
Sbjct: 284 KAV 286
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L +F G V R+C D + L +A++ + + +G RA
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L +++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 105 LNYSLIKGRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 152
Query: 350 ESVCGEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ G V ++ D H S FV + AE+A A+ +G++L
Sbjct: 153 -AAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLL 197
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 75 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 133
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E+ ALN + L I+VSP +T V + R PR
Sbjct: 134 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPPR 171
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 218 NSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFI 276
N+ T+ A +E++ R+VYV ++D T E++ F CG V I D + FA++
Sbjct: 71 NASTAEA-KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
EF ++E + ALNL + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + L EE RTV+ + Q++ L F G+V D R+
Sbjct: 144 RARPPFGKGHSPLGINDELTP-EERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 202
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 203 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 262
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 263 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 317
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 318 NADDAKKALEQLNGFELAGRPMKV 341
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 205
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 124 RIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 183
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 184 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 236
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
NID++VT + + FE GE+ L D +R FV F +SA AA++
Sbjct: 237 IKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 205 RRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI- 263
R + FG+G + L EE RTV+ + Q++ L F G+V D R+
Sbjct: 143 RARPPFGKGHSPLGINDELTP-EERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLI 201
Query: 264 -CGDPNSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 319
C A++EF D E AL L+G L P+ V + K + P +P+
Sbjct: 202 TCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPK 261
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFV 377
+ +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 262 G----QTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFLTFR 316
Query: 378 MAESAIAAL-NCSGVVLGSLPIRV 400
A+ A AL +G L P++V
Sbjct: 317 NADDAKKALEQLNGFELAGRPMKV 340
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV-----LRFAFIEFTDEEGARAA 287
T+++ +++ TEE L +F G V C + N + F F+E+ E A+ A
Sbjct: 718 TLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKA 777
Query: 288 L-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVK 346
L L G+++ + + V S+ AI PV + R ++ ++ I NI + + +++
Sbjct: 778 LKQLQGSVVDGHKLEVKISERAIKPVVTSARQRQTAHKQKTSK-ILVRNIPFQANKQEIR 836
Query: 347 LFFESVCGEVYRLRL----LGDYHHSTRIAFVEFVMAESAIAALNC 388
F S GE+ +RL G H FV+F+ + A A N
Sbjct: 837 ELF-STFGELKTVRLPKKMTGTGPHRG-FGFVDFLTKQDAKRAFNA 880
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 23/219 (10%)
Query: 188 FNNHNARNGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQ 247
N H R + A A ++ ++ G+ + N VYV + V E
Sbjct: 183 INGHGKRKADQEAQAPAKKSRTDGEAEPTAN---------------VYVGGLSWNVDNEW 227
Query: 248 LAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAALNLAGTMLGFYPVRV-LP 304
LA+ F CG+VV+ R+ D + F F+ F E A A+ + G + +R
Sbjct: 228 LASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCDFA 287
Query: 305 SKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD 364
++ PV + D+R A T+Y + + + V F G++ R+ L D
Sbjct: 288 AEKTDNPVE-RRAQKFNDQRSAPAATLYLGGLSYDLNEDAVYEAFGDF-GDIQRVSLPTD 345
Query: 365 YHHSTRIAF--VEFVMAESAIAALNC-SGVVLGSLPIRV 400
F VEF + A AAL +G L IRV
Sbjct: 346 RETGAPKGFGYVEFADVDQATAALEAMNGKELSGRRIRV 384
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ ML P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMLKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ D H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLL 163
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A+ A+N ML + K + F R E E E+ AR + TN
Sbjct: 143 VHFETHEAAQQAINTMNGML------LNDRKVFVG----HFKSRREREAELGARALEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL 386
I K DV LF S G++ ++++ D HS FV F E A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLF--SQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>gi|156055250|ref|XP_001593549.1| hypothetical protein SS1G_04976 [Sclerotinia sclerotiorum 1980]
gi|154702761|gb|EDO02500.1| hypothetical protein SS1G_04976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 998
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 201 NAAVRRKKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVD 260
+A +R K FG+ + ++ S T L T+YV++ E + LF CG++
Sbjct: 587 SAFLRDGKFFGENQIKVESGTGL---------TLYVTNYPPPADENYMHNLFKDCGEIFS 637
Query: 261 CRICGDP-NSVLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
R N+ RF +I F + E A AA L G +L + V P
Sbjct: 638 IRWPSLKFNTHRRFCYITFRNAEAASAATQLDGKLL----------ENKYKLVAKYSDPA 687
Query: 320 TEDEREMC---ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIA-FVE 375
+ +RE R ++ TN+D + + D+K F + G+V +R+L + ++ A FV
Sbjct: 688 GKKQREGATAEGRELHITNLDLSLNEDDLKEVF-AKYGQVESVRILRTHKGESKGAGFVV 746
Query: 376 FVMAESAIAALNCSGVVLGSLPIRV 400
F + A +AL L S + V
Sbjct: 747 FEKKDEANSALELDKTKLKSSILHV 771
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN---SVLRFAFIEFTDEEGA 284
E +R +YV +D +VTE+ L +F G V +I D N L + FIE+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 285 -RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-TIYCTNIDKKVTQ 342
RA L G + +R VN + T + + + I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTR-----IAFVEFVMAESAIAALNCSGVVLGSLP 397
+V L S CG V R++ D +AF E AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 264
Query: 398 IR 399
IR
Sbjct: 265 IR 266
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ + E R+VYV ++D T E+L A F GCG + + C + G P FA+I
Sbjct: 38 SIEDKMEADGRSVYVGNVDYGATAEELEAHFHGCGSINRVTILCDKFTGHPKG---FAYI 94
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D++ A L ++ ++V+P +T
Sbjct: 95 EFADKDSIETAKALDDSLFRGRQIKVVPKRT 125
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 317 LPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFV 374
P ED+ E R++Y N+D T +++ F CG + R+ +L D H A++
Sbjct: 36 FPSIEDKMEADGRSVYVGNVDYGATAEELEAHFHG-CGSINRVTILCDKFTGHPKGFAYI 94
Query: 375 EFVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
EF +S A + I+V P +T
Sbjct: 95 EFADKDSIETAKALDDSLFRGRQIKVVPKRT 125
>gi|407407545|gb|EKF31308.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 425
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 290
R Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+
Sbjct: 8 RYGCYIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKY 67
Query: 291 AGTMLGFYPVRVLPSKTAIA 310
G L ++V SK +
Sbjct: 68 NGFTLAGRKIKVGVSKGNVG 87
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T +++ ++D+Q+ + L F G V+ C++ D N R F
Sbjct: 128 RIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDENGRSRGFG 187
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE-----DEREMCAR 329
F+ + E A A+ ML L K ++ + E DE++
Sbjct: 188 FVHYDTAEAADTAIKAVNGML-------LNDKKVFV---GHYISKKERQAHIDEQKSQFT 237
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC 388
+Y N+D +VT + F GEV + D ++ FV F ESA AA++
Sbjct: 238 NLYVKNLDTEVTDDEFNDMFAKF-GEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDA 296
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 291
+YV ++D +VT+++ +F G+V + D + F F+ F D E A+AA++ L
Sbjct: 239 LYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDALH 298
Query: 292 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
T L + R + ++ + E + +Y N++ + ++
Sbjct: 299 DTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLEDDMDDDKLRA 358
Query: 348 FFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSPSK 404
FE G + +++ D +++ FV + E A A+ + +LGS P+ VSP++
Sbjct: 359 EFEPF-GTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLYVSPAQ 416
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T++V++ + E + LF G+++D R N+ RF +++F E A +A L
Sbjct: 907 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 966
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC--ARTIYCTNIDKKVTQADVKLFF 349
GT +G + L I+ +P+ R +D R I+ +N+D K ++ DV+ F
Sbjct: 967 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1017
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSG 390
S G V +RL ++ +V F E A AAL G
Sbjct: 1018 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDG 1058
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
T+YV +D++VT+ L LFV G VV + D +S F FIEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 291 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRTEDEREM-CARTIYCTNIDKKVTQADVKL 347
M+ Y P++V + + E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 348 FFES-----VCGEVYRLRLLGDYHHSTRIAFVEFV---MAESAIAALN 387
F++ V +V ++ + +S AFV F ++SAI A+N
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMN 163
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD-PNSVLRFAFIEFTDEEGARAALNLA 291
++YV D+D V E QL LF V R+C D L +A++ F + E A A++
Sbjct: 59 SLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPEDASRAMD-- 116
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE- 350
L + P+R P + ++ +P+ R ++ N+D + D K +E
Sbjct: 117 --SLNYAPIRDRPIRIMLSNRDPS-------TRLSGKGNVFIKNLDPSI---DNKALYET 164
Query: 351 -SVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN-CSGVVL 393
S G + ++ D S FV+F E+A AA++ +G++L
Sbjct: 165 FSAFGTILSCKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLL 210
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++Y+ ++D VTE L LF G V R+C D + L +A++ F + E+G +A
Sbjct: 70 SLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 129
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ +P+ R+M ++ N+D + + F
Sbjct: 130 LNYTLIKGRPCRIMWSQR-----DPSL-------RKMGTGNVFIKNLDPAIDNKALHDTF 177
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRV 400
S G++ ++ D +S FV F +SA AA+ + +G++L + V
Sbjct: 178 -SAFGKILSCKVAVDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYV 229
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R+VYV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 87 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 143
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D++ + A+ + ++ ++V+P +T
Sbjct: 144 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 174
>gi|336466895|gb|EGO55059.1| hypothetical protein NEUTE1DRAFT_123594 [Neurospora tetrasperma
FGSC 2508]
gi|350288499|gb|EGZ69735.1| hypothetical protein NEUTE2DRAFT_116479 [Neurospora tetrasperma
FGSC 2509]
Length = 1103
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T++V++ + E+ + LF CG + R N+ RF ++ F D A AA L
Sbjct: 703 TLFVTNYPPEADEQSIRDLFKHCGDIHSIRFPSLKYNTKRRFCYVSFRDRSAAAAATQLD 762
Query: 292 GTML--GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
G L G Y ++ S V +ERE+ + N+ + ++ DV+ F
Sbjct: 763 GKPLEGGKYKLQAKLSDPGHRQVRQG---AQAEEREL-----HVNNLPRAASEEDVEGLF 814
Query: 350 ESVCGEVYRLRLLGDYHH-STRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSPSKTPV 407
+ G V +RL + ST AFV E A A+ V+ G+ P++V SK P
Sbjct: 815 QK-AGNVVSVRLTRNMAGVSTGTAFVVMETKEQAAKAIEILDKVIFGNHPLKVEVSKPPT 873
Query: 408 R 408
R
Sbjct: 874 R 874
>gi|261195985|ref|XP_002624396.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239587529|gb|EEQ70172.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
Length = 1294
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
TV V ++ VTE ++ F G+VVD R N+ RF +++F A AA L
Sbjct: 865 TVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 924
Query: 292 GTMLGFYPVRVLPSKTAIAPV-----NPT-FLPRTEDEREMCARTIYCTNIDKKVTQADV 345
GT ++ +++ P+ +PT RT E R I+ +N+D K T+ D+
Sbjct: 925 GTQQEVSGNSMVSAESTKLPLVVKISDPTKRQDRTGPMEE--GREIHVSNLDWKATEDDL 982
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
F + GEV R+ + +++ FV F +SA AAL + S P+ V S
Sbjct: 983 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1041
Query: 405 -TPVRPRA 411
TP + +A
Sbjct: 1042 PTPAKRQA 1049
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
R ++VS++D + TE+ L LF G+V RI N + F F+ F ++ A AAL +
Sbjct: 966 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1025
Query: 291 AGTMLGFYPVRV 302
+ P+ V
Sbjct: 1026 HEQLFRSRPLNV 1037
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 205
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 16/176 (9%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 124 RIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYG 183
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM A +Y
Sbjct: 184 FVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNVY 236
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
NID++VT + + FE GE+ L D +R FV F +SA AA++
Sbjct: 237 IKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
T+YV ++D +V EE + LF+ CG +V+ I D N + F+EF EE A A+ +
Sbjct: 21 TLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADYAIKI 80
Query: 291 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRTEDER-EMCARTIYCTNIDKKVTQADVKLF 348
+ F P++V + ++D+R + ++ N+ + V + ++
Sbjct: 81 MHMVKLFGKPIKVNKA--------------SQDKRTQEVGANVFVGNLHEDVDEKMLRDV 126
Query: 349 FESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIRVS 401
F S G V +++ D S R FV + ES+ A++ +G L PI VS
Sbjct: 127 FSSF-GIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQYLCGKPIDVS 181
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S+ ++ E R+VYV ++D T E+L F GCG + + C + G P FA+I
Sbjct: 87 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKG---FAYI 143
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D++ + A+ + ++ ++V+P +T
Sbjct: 144 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 174
>gi|336261828|ref|XP_003345700.1| hypothetical protein SMAC_05857 [Sordaria macrospora k-hell]
gi|380090036|emb|CCC12119.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1154
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T++V++ + E+ + LF CG + R N+ RF ++ F D A AA L
Sbjct: 751 TLFVTNYPPEADEQYIRDLFKHCGDIHSIRFPSLKYNTKRRFCYVSFRDRSFAAAATQLD 810
Query: 292 GTML--GFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
G L G Y ++ S V + ED R ++ N+ + ++ DV+ F
Sbjct: 811 GKPLEGGKYKLQAKFSDPGHRQVRQG--AQAED------RELHVMNLPRAASEDDVEGLF 862
Query: 350 ESVCGEVYRLRL---LGDYHHSTRIAFVEFVMAESAIAALN-CSGVVLGSLPIRVSPSKT 405
E G+V +RL +G ST AFV E A A+ V+ G+ P++V SK
Sbjct: 863 EK-AGKVVSVRLTRNMGGV--STGTAFVVMETKEQAAKAIEILDKVIFGNHPLKVEVSKP 919
Query: 406 PVR 408
P R
Sbjct: 920 PTR 922
>gi|125550587|gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indica Group]
Length = 548
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGDPNSVLRFAFIEFTD 280
L++ E + VYV I +E+ + + F CG + VDC + A + F
Sbjct: 165 LSEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKT 224
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKV 340
+ A+ AL L G +G + +++ P K+ + F P+ + +Y N+ +
Sbjct: 225 DAAAQRALALDGADMGGFFLKIQPYKSVREKED--FAPKMIEGYNR----VYVGNLAWDI 278
Query: 341 TQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF--VEFVMAESAIAALNCSGVVLGSLPI 398
T+ D+K FF S C ++ +R D + V+F S A+ V+ P+
Sbjct: 279 TEDDLKKFF-SDC-KISSIRFGTDKETGDFKGYVHVDFSEGTSVAVAMKLDQKVIKGRPV 336
Query: 399 RV 400
R+
Sbjct: 337 RI 338
>gi|71660275|ref|XP_821855.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887244|gb|EAO00004.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 235 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 294
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 295 LGFYPVRVLPSKTAIA 310
L ++V SK +
Sbjct: 72 LAGRKIKVGVSKGNVG 87
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 10/191 (5%)
Query: 217 MNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFA 274
+ S L EE+ R +YV +I + VT ++L A+F G V+ + D S RF
Sbjct: 54 LASSAVLEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFG 113
Query: 275 FIEFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYC 333
F+ + E A AA+ +L T +G ++V +++ + ++P+ P E +Y
Sbjct: 114 FVTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNIDPS-APEPEPAFVDSQYKVYV 172
Query: 334 TNIDKKVTQADVKLFFESVCGEVYRL---RLLGDYHHSTRIAFVEFVMAESAIAALNC-S 389
N+ K VT +K FF S GEV R+ G S FV F E AA++ +
Sbjct: 173 GNLAKTVTTEVLKNFF-SEKGEVLSATVSRIPGT-PKSKGYGFVTFSSEEEVEAAVSTFN 230
Query: 390 GVVLGSLPIRV 400
L PIRV
Sbjct: 231 NTELEGQPIRV 241
>gi|389593531|ref|XP_003722019.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|321438521|emb|CBZ12280.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 439
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 21/182 (11%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A E + V +S I T QL +F CG + D + AF+ +T EE
Sbjct: 130 ADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEEA 185
Query: 284 ARAALNLAGTMLGFYPVRVLPSKT---AIAPV---------NPTFLPRTEDEREMCARTI 331
AL L G M+ PV V P A P N + R++ R +
Sbjct: 186 CEKALKLDGAMVNGNPVVVRPCPPRDDAPGPASRRDATRRGNESTTASAPSRRQLDVRVV 245
Query: 332 YCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGV 391
+ VT+ ++ FF CG + + L + +AFV F AE+A A++ SG
Sbjct: 246 V-HGVPSDVTKEALRAFFSPDCGPLTDVFLKPEIG----VAFVAFTSAENAKRAISKSGE 300
Query: 392 VL 393
+L
Sbjct: 301 ML 302
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ ML P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMLKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ D H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLL 163
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A+ A+N ML + K + F R E E E+ AR + TN
Sbjct: 143 VHFETHEAAQQAINTMNGML------LNDRKVFVG----HFKSRREREAELGARALEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL 386
I K DV LF S G++ ++++ D HS FV F E A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLF--SQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 18/164 (10%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEF---TDEEGARAAL 288
++V D+ ++ + L F G++ DCR+ DP ++ + F+ F + E A AA+
Sbjct: 97 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAM 156
Query: 289 NLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
N G LG + R P+ + P ++ T+YC + +T
Sbjct: 157 N--GQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLTSGLTD 214
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL 386
V+ F G + +R+ D + AFV F ESA A+
Sbjct: 215 ELVQKTFAPF-GNIQEIRVFKDKGY----AFVRFATKESATHAI 253
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
+E +T+YV ++D VTE L LF G V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHTAAVT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL + VL + + +P P+T+ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETNIL 112
Query: 346 KLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F GE+ R++ D S AFV FV AE+AI A+N G LGS IR
Sbjct: 113 REAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 401 SPS--KTPVR 408
+ S K P +
Sbjct: 170 NWSTRKPPAK 179
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALN- 289
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ ML P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMLKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + +++ D H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLL 163
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A+ A+N ML + K + F R E E E+ AR + TN
Sbjct: 143 VHFETHEAAQQAINTMNGML------LNDRKVFVG----HFKSRREREAELGARALEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL 386
I K DV LF S G++ ++++ D HS FV F E A A+
Sbjct: 193 IYVKNLPVDVDEQGLQDLF--SQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAV 248
>gi|440474273|gb|ELQ43025.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae Y34]
gi|440485469|gb|ELQ65427.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae P131]
Length = 831
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 31/270 (11%)
Query: 141 MRELQELFSKLNPMAEEFVPPS----LAKTNNNNHGVNGFNGGFFAN--NSLIFNNHNAR 194
+ EL++ F + P+ +PPS + + ++ H F ++ +SL++ +
Sbjct: 506 LDELKKTFEEYGPLTRVLMPPSATIAIVQFSHAAHAKTAFKKLAYSKFKSSLLYLEMAPK 565
Query: 195 NGNVNANAAVRRKKSFGQGKRRMNSRTSLAQREEIIRR----TVYVSDIDQQVTEEQLAA 250
+ N V + QGK+++ S T L +R++ + +++V ++ T E+LA
Sbjct: 566 DVFKN----VPEPTAQEQGKQKL-SVTELLERDDAEEQGETTSLFVKGLNFATTTEKLAE 620
Query: 251 LFVGCGQVVDCRI-----CGDPNSVLR--FAFIEFTDEEGARAALNLAGTM-LGFYPVRV 302
F V R+ P VL F F+EF +E A+AAL + L + + V
Sbjct: 621 TFQSLEGFVSARVKTKTDPKKPGQVLSMGFGFVEFRSKELAQAALKVMDNYNLEGHTLTV 680
Query: 303 LPSKTAIAPVNPTFLPRTED--EREMCART-IYCTNIDKKVTQADVKLFFESVCGEVYRL 359
S + R ED +++ RT I N+ + T+ DV+ F G++ +
Sbjct: 681 RASHRGLDAAEER---RREDKAKKQAGQRTKIVVKNLPFEATKKDVRTLF-GTYGQLRSV 736
Query: 360 RLLGDYHHSTR-IAFVEFVMAESAIAALNC 388
R+ ++ + TR AF EF + A ALN
Sbjct: 737 RVPKNFENRTRGFAFAEFTTPKEAENALNA 766
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 21/190 (11%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARA 286
+E +T+YV ++D VTE L LF G V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHTAAVT 61
Query: 287 ALNLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL + VL + + +P P+T+ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETNIL 112
Query: 346 KLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM---AESAIAALNCSGVVLGSLPIRV 400
+ F GE+ R++ D S AFV FV AE+AI A+N G LGS IR
Sbjct: 113 REAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 401 SPS--KTPVR 408
+ S K P +
Sbjct: 170 NWSTRKPPAK 179
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALN-CSGVVL 393
+ S G + +++ D + S FV F E+A A++ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLL 163
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A A++ + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIDKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N + +K F G ++++ D + ++ FV F E A A++
Sbjct: 192 NVYIKNFGDDMNDERLKEMF-GKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVD 249
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 291
+Y+ ++D +TE L F G+++ I D N + + FAF+ + + + A+ A+ +
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAMN 252
Query: 292 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
G G Y R ++ F R E + A +Y NID VT +++
Sbjct: 253 GLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 348 FFESVCGEVYRLRLL-GDYHHSTRIAFVEFVMAESA-IAALNCSGVVLGSLPIRVSPSKT 405
F S CG + ++++ D S FV F E A A ++ +G P+ ++ ++
Sbjct: 313 LFSS-CGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSFNGCTFHRKPLYIAIAQR 371
Query: 406 PVRPRAPRLPMH 417
+ R +L +H
Sbjct: 372 K-KERKTQLNLH 382
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 18/97 (18%)
Query: 224 AQREEIIRR----------------TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP 267
A+RE+I+ R +YV +ID VT+++L LF CG + ++ D
Sbjct: 270 AEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDD 329
Query: 268 NSVLR-FAFIEFTD-EEGARAALNLAGTMLGFYPVRV 302
+ + F F+ F++ EE +A ++ G P+ +
Sbjct: 330 KGISKGFGFVCFSNPEEANKAVMSFNGCTFHRKPLYI 366
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV--LRFAFIEFTDEEGARAALNL 290
++YV D+ V E L A FV G + R+C D ++ L + ++ F ++ A A+ L
Sbjct: 13 SIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVNFRSQQDAIRAIKL 72
Query: 291 A-GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
+ L +RV+ +L R + R+ ++ N+ + A + F
Sbjct: 73 RNNSYLNGKVIRVM------------WLHRDPNARKSGRGNVFVKNLAGSIDNAGLHDLF 120
Query: 350 ESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES---AIAALNCSGV 391
+ + ++ + S FV+F ES AI LN S V
Sbjct: 121 KKYGNILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTV 165
>gi|146197780|dbj|BAF57609.1| polyadenylate-binding protein [Dugesia japonica]
Length = 216
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
+T+Y+S + VTEE L ++F G V C + NS A++EF +E AR AL++
Sbjct: 14 KTIYISCLPNSVTEEDLLSIFENYGLCVSCEL----NSEECTAYVEFDNETSARNALSMN 69
Query: 292 GTMLGFYPVRVLPSKTAIAPV-------NPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
G +G ++++ + + + FL +T+D I+ NI V +A
Sbjct: 70 GIEMGATRIQIIIAYDYTSAFEQEYQMNSKNFLGKTDDST---PTQIFVGNIGSNVDEAI 126
Query: 345 VKLFFESVCGEVYRLRLLGD 364
++ FE + G++ +++ D
Sbjct: 127 LEGGFEHL-GKIIDTKVIRD 145
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|239614479|gb|EEQ91466.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 1294
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
TV V ++ VTE ++ F G+VVD R N+ RF +++F A AA L
Sbjct: 865 TVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 924
Query: 292 GTMLGFYPVRVLPSKTAIAPV-----NPT-FLPRTEDEREMCARTIYCTNIDKKVTQADV 345
GT ++ +++ P+ +PT RT E R I+ +N+D K T+ D+
Sbjct: 925 GTQQEVSGNSMVSAESTKLPLVVKISDPTKRQDRTGPMEE--GREIHVSNLDWKATEDDL 982
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
F + GEV R+ + +++ FV F +SA AAL + S P+ V S
Sbjct: 983 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1041
Query: 405 -TPVRPRA 411
TP + +A
Sbjct: 1042 PTPAKRQA 1049
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 37/191 (19%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
R ++VS++D + TE+ L LF G+V RI N + F F+ F ++ A AAL +
Sbjct: 966 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1025
Query: 291 AGTMLGFYPVRV-----LPSK---TAI---------AP------VNPTF--LPRTEDE-- 323
+ P+ V P+K TAI +P +P++ +P D+
Sbjct: 1026 HEQLFRSRPLNVHISTPTPAKRQATAIISRVGGRSESPSMEPNGASPSYSTVPHAPDQPT 1085
Query: 324 ---REMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFV-MA 379
+ RT+ NI + ++ S G + +L L D+ A VEFV ++
Sbjct: 1086 GNASDKHLRTLALMNIPDTINDTRIRTLV-SPYGALVKLILRPDHQG----AIVEFVDVS 1140
Query: 380 ESAIAALNCSG 390
++ A+L G
Sbjct: 1141 DAGRASLGLDG 1151
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 51 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 110
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 111 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 158
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 159 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 203
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
VYV +ID +VT+E+ LF G + I D + R F F+ + D + A++A++
Sbjct: 233 VYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGKSRGFGFVNYVDHQNAQSAVD 289
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T++V++ + E + LF G+++D R N+ RF +++F E A +A L
Sbjct: 907 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 966
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC--ARTIYCTNIDKKVTQADVKLFF 349
GT +G + L I+ +P+ R +D R I+ +N+D K ++ DV+ F
Sbjct: 967 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1017
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSG 390
S G V +RL ++ +V F E A AAL G
Sbjct: 1018 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDG 1058
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 207 KKSFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD 266
+K G + N+ S A +EE R+V+V ++D T E++ F CG V I D
Sbjct: 68 EKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 127
Query: 267 PNSVLR-FAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 319
+ FA++EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 128 KFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 180
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAI 383
E AR+++ N+D T +V+ F+S CG V R+ +L D + A+VEFV AE+
Sbjct: 89 EADARSVFVGNVDYACTPEEVQQHFQS-CGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQ 147
Query: 384 AALNCSGVVLGSLPIRVSPSKTPV------RPR 410
AL + L ++V P +T V RPR
Sbjct: 148 EALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 180
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
T++V++ + E + LF G+++D R N+ RF +++F E A +A L
Sbjct: 906 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 965
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC--ARTIYCTNIDKKVTQADVKLFF 349
GT +G + L I+ +P+ R +D R I+ +N+D K ++ DV+ F
Sbjct: 966 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1016
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSG 390
S G V +RL ++ +V F E A AAL G
Sbjct: 1017 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDG 1057
>gi|194864858|ref|XP_001971142.1| GG14596 [Drosophila erecta]
gi|190652925|gb|EDV50168.1| GG14596 [Drosophila erecta]
Length = 731
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 226 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 285
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 286 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 336
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 337 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNL--FDLGGQLLRV 394
Query: 401 SPSKTP 406
S TP
Sbjct: 395 GRSITP 400
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ S G + +++ D + S FV F E+A A+ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 163
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N ++ ++ F S G +R++ D + +R FV F E A A++
Sbjct: 192 NVYIKNFGDEMDDEKLRELF-SKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVD 249
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 86 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 142
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 143 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 173
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN---SVLRFAFIEFTDEEGA 284
E +R +YV +D +VTE+ L +F G V +I D N L + FIE+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 285 -RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR-TIYCTNIDKKVTQ 342
RA L G + +R VN + T + + + I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTR-----IAFVEFVMAESAIAALNCSGVVLGSLP 397
+V L S CG V R++ D +AF E AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 264
Query: 398 IR 399
IR
Sbjct: 265 IR 266
>gi|384245524|gb|EIE19017.1| hypothetical protein COCSUDRAFT_67932 [Coccomyxa subellipsoidea
C-169]
Length = 596
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
R+V+V + E +AA F GCG+V++ I D + R FA +EF++E A AL L
Sbjct: 437 RSVHVQGVSPLAVPEVIAAHFSGCGRVINVTIGRDMQGMSRGFAHVEFSNELEAHNALLL 496
Query: 291 AGTMLGFYPVRVLP 304
+G++L P+ V P
Sbjct: 497 SGSILLQQPITVTP 510
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGAR 285
+ + ++YV D++ V + QL LF G VV R+C D ++ L + ++ +++ + A
Sbjct: 26 QFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 85
Query: 286 AALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
AL++ L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 86 RALDV----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKGIDHKAL 134
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVSP 402
F S G + ++ D ++ FV+F E+A A++ +G++L + V P
Sbjct: 135 HDTF-SAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGP 192
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTD-EEGARAALNLA 291
+Y+ ++D + +++L LF G + C++ DPN + R + F+ F+ EE +RA +
Sbjct: 314 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 373
Query: 292 GTMLGFYPVRV 302
M+ P+ V
Sbjct: 374 SKMVVSKPLYV 384
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G +V R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVM---AESAIAALNCSGVVL 393
+ S G + +++ D + S FV F AE AI +N G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSRGYGFVHFETHDAAERAIEKMN--GMLL 163
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGF 142
Query: 276 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F + A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETHDAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAREFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N + + +K F S G +R++ D R FV F E A A++
Sbjct: 192 NVYIKNFGEDMDDEKLKEIF-SKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQKAVD 249
>gi|346472667|gb|AEO36178.1| hypothetical protein [Amblyomma maculatum]
Length = 101
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLA 291
RT+YV ++D VTEE L A+F GQV C+I +P + + F+EF+D + A +AL
Sbjct: 13 RTLYVGNLDIAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASALLAM 71
Query: 292 GTMLGFYPVRV 302
L F V V
Sbjct: 72 NKRLCFGKVSV 82
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 306 KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 365
+ IAP P+ ++E + +R++Y N+D T ++++ F+S CG V R+ +L D
Sbjct: 29 EAGIAPGGPSVDAAAKEEAD--SRSVYVGNVDYSCTPEELQMHFQS-CGTVNRVTILTDK 85
Query: 366 HHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPV 407
+ + A++EF+ A++ A G L + I+VSP +T V
Sbjct: 86 MGNPKGFAYIEFLEADAVTNACLLDGSELRNRAIKVSPKRTNV 128
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC----GDPNSVLRFAFIEFT 279
A +EE R+VYV ++D T E+L F CG V I G+P FA+IEF
Sbjct: 42 AAKEEADSRSVYVGNVDYSCTPEELQMHFQSCGTVNRVTILTDKMGNPKG---FAYIEFL 98
Query: 280 DEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
+ + A L G+ L ++V P +T +
Sbjct: 99 EADAVTNACLLDGSELRNRAIKVSPKRTNV 128
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 90 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 147 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 177
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGQPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ S G + +++ D + S FV F E+A A+ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 163
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N ++ ++ F S G +R++ D + +R FV F E A A++
Sbjct: 192 NVYIKNFGDEMDDEKLRELF-SKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVD 249
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF-TDEEGARAALNL 290
++V ++ T E+LA +F G+V D +I D N FAF+ T EE A+A
Sbjct: 112 LFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMF 171
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER--EMCAR-------TIYCTNIDKKVT 341
G +LG R VN +PR + R M R IY N+ V
Sbjct: 172 DGALLGGRTAR----------VNYPEVPRGGERRTVTMAGRRRDDGTYKIYAGNLGWGVR 221
Query: 342 QADVKLFFESVCGEV-YRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVLGSLPIR 399
++ FE G + R+ + S FV F AE A AAL GV L P+R
Sbjct: 222 ADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLR 281
Query: 400 VS 401
+S
Sbjct: 282 LS 283
>gi|156100785|ref|XP_001616086.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148804960|gb|EDL46359.1| RNA binding protein, putative [Plasmodium vivax]
Length = 611
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 228 EIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAA 287
++ + +Y+ ++ +E+ + ALF G ++ + + AF+EFT+EE A+AA
Sbjct: 162 DVFSKIIYMENVPANCSEDDIKALFKSVGTTTSYKLQYNEQKKMNTAFVEFTNEEHAKAA 221
Query: 288 LNLAGTMLG 296
L L GT +G
Sbjct: 222 LLLNGTKIG 230
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 230 IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALN 289
I VYV ++ VTE+ + F C +++ P ++ IEF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 290 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 316
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISQNPPF 91
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALN 289
RTV+V + Q+V E+ L G+V + + D N FA++E ++ E L
Sbjct: 8 RTVFVGQLTQKVREKDLERFLSKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPKVLL 67
Query: 290 LAGTMLGF--YPVRVLPS---------KTAIAPVNPTFLPRTEDEREMCART------IY 332
L G + F +P+ + S K ++ + P T D M A IY
Sbjct: 68 LNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNAAASTAPLTADAPGMSASALSAASRIY 127
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAALN-CSG 390
C N+ +T+ D+++ F+S GEV + + D S +F++F + A AL+ +G
Sbjct: 128 CGNLHTNITEDDLRIVFQSF-GEVLSVTINRDEMGRSKGFSFIQFSSPQEANFALSKGNG 186
Query: 391 VVLGSLPIRVSP 402
+ L +R+ P
Sbjct: 187 LELAGNYLRLGP 198
>gi|71667313|ref|XP_820607.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885958|gb|EAN98756.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 424
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 235 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 294
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 295 LGFYPVRVLPSKTAIA 310
L ++V SK +
Sbjct: 72 LAGRKIKVGVSKGNVG 87
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 221 TSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEF 278
T+ AQ+ ++YV ++D VTE L LF GQV R+C D + L +A++ +
Sbjct: 37 TTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 96
Query: 279 -TDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNID 337
+ E+G +A L T++ P R++ S+ +P R+ ++ N+D
Sbjct: 97 NSSEDGEKALEELNYTVIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLD 144
Query: 338 KKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ + F + G + ++ D +S FV + AE+A A+ + +G++L
Sbjct: 145 HAIDNKALHDTF-AAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLL 201
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDP-NSVLRFA 274
R +QR+ +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 RIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYG 179
Query: 275 FIEFTDEEGARAAL-NLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRTEDEREMCART 330
F+ + E A A+ ++ G +L V V +P K ++ +E +
Sbjct: 180 FVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFTN 230
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
IY NID VT D + FE G++ + D +R FV ++ E+A A++
Sbjct: 231 IYVKNIDLDVTDEDFRELFEK-HGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVD 287
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 277
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 73 SASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 132
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
F ++E + ALNL + L ++V P +T +
Sbjct: 133 FLEQEAVQEALNLNESELHGRQIKVAPKRTNV 164
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 77 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 135
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E+ ALN + L I+V+P +T V + R PR
Sbjct: 136 QEAVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPR 173
>gi|328876647|gb|EGG25010.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 748
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALF--VGCGQVVDCRICGDPNSV--LRFAFIEFTDEEGARAAL 288
++YV D+ Q+V E LA LF VG V +C D ++ L +A++ F + A AL
Sbjct: 131 SLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAERAL 190
Query: 289 N-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
+ L +++ P R++ S R +R+ I+ N++K V A L
Sbjct: 191 DTLNYSLILGRPCRIMWSH------------RDPTKRKSNVGNIFVKNLEKNVDNA---L 235
Query: 348 FFE--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA-IAALNCSGVVLGSLPIRVSP 402
F+ S G + ++ + S +V F ES+ A L +G +L PI V P
Sbjct: 236 LFDTFSTYGNILSCKIEYEKGISKGYGYVHFENQESSEQAILKVNGTILLGKPIIVEP 293
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMA 379
D+ E+ R+IY N+D K T + +F+S CG V R+ +L D H +VEF+
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQS-CGTVNRITILSDKTTGHPKGCCYVEFLNK 59
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSKT--PVRPRAP 412
ES A+ + + I+++P +T P R P
Sbjct: 60 ESINNAMALNDSIFNDRQIKITPKRTNLPYYMRNP 94
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV-----VDCRICGDPNSVLRFAFIEFTD 280
+EEI R++YV ++D + T +Q+ A F CG V + + G P ++EF +
Sbjct: 2 QEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGC---CYVEFLN 58
Query: 281 EEGARAALNLAGTMLGFYPVRVLPSKTAI 309
+E A+ L ++ +++ P +T +
Sbjct: 59 KESINNAMALNDSIFNDRQIKITPKRTNL 87
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEF-TDEEGARAALNL 290
++V ++ T E+LA +F G+V D +I D N FAF+ T EE A+A
Sbjct: 114 LFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMF 173
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER--EMCAR-------TIYCTNIDKKVT 341
G +LG R VN +PR + R M R IY N+ V
Sbjct: 174 DGALLGGRTAR----------VNYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNLGWGVR 223
Query: 342 QADVKLFFESVCGEV-YRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIR 399
++ FE G + R+ + S FV F AE A AAL + GV L P+R
Sbjct: 224 ADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRPLR 283
Query: 400 VS 401
+S
Sbjct: 284 LS 285
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L LF GQV R+C D + L +A++ + + +G RA +
Sbjct: 51 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 110
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 111 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 158
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ G + ++ D + +S FV + AE+A A+ + +G++L
Sbjct: 159 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLL 203
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN 289
VYV +ID +VT+E+ LF G + I D + R F F+ + D E A+ A++
Sbjct: 233 VYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSRGFGFVNYVDHENAQTAVD 289
>gi|195490418|ref|XP_002093131.1| GE20955 [Drosophila yakuba]
gi|194179232|gb|EDW92843.1| GE20955 [Drosophila yakuba]
Length = 637
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 192 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 242
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 300
Query: 401 SPSKTP 406
S TP
Sbjct: 301 GRSITP 306
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 211 GQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSV 270
GQ K++ N+ T+ + + R + V+ + Q +TEE++ +LF G+V ++ D N +
Sbjct: 50 GQEKKQQNT-TAASSGSDNARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVI 108
Query: 271 ---------LRFAFIEFTDEEGARAALN-LAGTMLGFYPVRV---LPSKTAIAPVNPTFL 317
L + F+ F + A A+N L G L ++V PS I N
Sbjct: 109 YPGQPKGQSLGYGFVNFHRSQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGAN---- 164
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLR-LLGDYHHSTR-IAFVE 375
+Y + + K +TQ ++++ F GE+ R L+ D + + + F+
Sbjct: 165 -------------LYISGLPKTITQEELEIIFRP-YGEIITSRVLVQDGNDKPKGVGFIR 210
Query: 376 FVM---AESAIAALNCSGVVLGSLPIRVSPSKTP 406
F AE AIAALN + + PI V S TP
Sbjct: 211 FDQRKEAERAIAALNGTTPKGLTDPITVKFSNTP 244
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
S+ ++ E R+VYV ++D T E+L F GCG + I G P FA+I
Sbjct: 87 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYI 143
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF D++ + A+ + ++ ++V+P +T
Sbjct: 144 EFGDKDSVQTAMAMDESLFRGRQIKVMPKRT 174
>gi|24655228|ref|NP_525123.2| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
gi|41688713|sp|Q8T6B9.2|PUF68_DROME RecName: Full=Poly(U)-binding-splicing factor half pint;
Short=Protein half pint; AltName: Full=68 kDa
poly(U)-binding-splicing factor; AltName: Full=PUF60
homolog
gi|7292088|gb|AAF47501.1| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
Length = 637
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 192 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 242
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 300
Query: 401 SPSKTP 406
S TP
Sbjct: 301 GRSITP 306
>gi|325183203|emb|CCA17661.1| nucleolin putative [Albugo laibachii Nc14]
Length = 701
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQV--VDCRICGD--PNSVLRFAFIEFTDEEGARAALN 289
+Y+ + + TE Q+ F CG V +D + GD P+ R I F+ A AAL
Sbjct: 438 IYILGLPWEATEAQVRERFESCGTVEHIDMQTQGDGRPSGKAR---IRFSCASEAEAALE 494
Query: 290 LAGTMLGFYPVRV-LPSKTAIAPVNPTF-----LPRTEDEREMCARTIYCTNIDKKVTQA 343
L G+ G +++ L ++ P N T LP D+ +C
Sbjct: 495 LDGSDFGGRWLKIQLANEILEKPENCTTAFVGNLPWDADDNSVCE--------------- 539
Query: 344 DVKLFFESVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
FF S CGE+ RLL D I +VEF E+A A+ +G +R+
Sbjct: 540 ----FF-SQCGEIGECRLLSDRETGEFRGIGYVEFTSTEAADEAIKLNGADFNGRSLRI 593
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGA-RAA 287
R + ++ + Q +TE +L +FV G V +C+I D F F+ + + A RA
Sbjct: 26 RTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRAI 85
Query: 288 LNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKL 347
L G + ++V ++ P ED +E +Y TN+ + VT+ ++
Sbjct: 86 QTLNGLQIQNKRIKVSYAR-----------PPGEDRKET---NLYVTNLPRDVTEDELTN 131
Query: 348 FFESVCGEVYRLRLLGD--YHHSTRIAFVEFVMAESAIAAL 386
F S G + ++ LL D +AFV F E A+AA+
Sbjct: 132 IF-SAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAI 171
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRIC-----GDPNSVLRFAFI 276
SL +++EI R+VYV ++D + E+L A F GCG + I G P FA+I
Sbjct: 90 SLEEKQEIDTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKG---FAYI 146
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKT 307
EF +E AL + T+ ++V+ +T
Sbjct: 147 EFGSKEFVETALAMNETLFRGRQIKVMSKRT 177
>gi|19224321|gb|AAL86452.1|AF479079_1 half pint [Drosophila melanogaster]
Length = 637
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 192 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 242
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 300
Query: 401 SPSKTP 406
S TP
Sbjct: 301 GRSITP 306
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 74 RIMWSQRDPSLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVAIDEKGNSKGYG 133
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
F+ F EE A +++ ML L K F+PR E E+E+ +
Sbjct: 134 FVHFETEEAANTSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLFT 183
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR----IAFVEFVMAESAIAA 385
+Y N + +K FFE G++ +++ ++ +A+ AE+A+ A
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQA 242
Query: 386 LN 387
LN
Sbjct: 243 LN 244
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 212 QGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS-- 269
QG + + A + + ++YV D++ V + QL LF G VV R+C D ++
Sbjct: 10 QGPGPAPNSAAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRR 69
Query: 270 VLRFAFIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR 329
L + ++ +++ + A AL++ L F P+ P + + +P+ R+
Sbjct: 70 SLGYGYVNYSNPQDAARALDV----LNFTPLNGKPLRIMYSHCDPSI-------RKSGTG 118
Query: 330 TIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRI 371
I+ N+DK + + F S G + + L Y ++ R+
Sbjct: 119 NIFIKNLDKGIDHKALHDTF-SAFGNILSCKDLDTYQNNMRL 159
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
R + ++ + Q +TE++L ++FV G V CR+ D + F F+ +T E A A+
Sbjct: 81 RTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAI 140
Query: 289 NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLF 348
N T+ G ++V + ++ P+ E+ +Y TN+ + +T+ V+
Sbjct: 141 N---TLNG---LQVQNKRLKVSFARPS-------GEEIKETNLYVTNLPRNITEKQVEEI 187
Query: 349 FESVCGEVYRLRLLGDYHHST--RIAFVEFVMAESAIAALN-CSGVVL--GSLPIRV 400
F S G++ + +L D +AFV + E A A+N G + GS P+ V
Sbjct: 188 F-SKFGQIVQKNILKDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSV 243
>gi|242089287|ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 9/178 (5%)
Query: 225 QREEIIRRTVYVSDIDQQVTEEQLAALFVGCG--QVVDCRICGDPNSVLRFAFIEFTDEE 282
QRE+ I++ VYV I +E+ + + F CG V+DC + A + F +
Sbjct: 195 QREQSIKK-VYVGGIPYYSSEDDIRSFFEACGTITVIDCMTFPESGKFRGIAILTFKTDA 253
Query: 283 GARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
A+ AL + G +G + +++ P K + F P+ + IY N+ +T
Sbjct: 254 AAQRALAMDGADMGGFYLKIQPYKHNREKED--FAPKLIEGYNR----IYVGNLPWDITD 307
Query: 343 ADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRV 400
D+K FF R + A V+F S AL V+ P+R+
Sbjct: 308 DDLKKFFSECNISSIRFGTDKETGEFKGYAHVDFSDGTSLAVALKLDQKVIKGRPVRI 365
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTD-EEGARAALN 289
++Y D+D TE QL LF G VV R+C D L +A++ F + ARA
Sbjct: 33 SLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDA 92
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L ++ P+R++ S+ R R+ I+ N+DK++ D K +
Sbjct: 93 LNFQVVNGKPIRIMYSQ------------RDPALRKSGVGNIFIKNLDKEI---DNKALY 137
Query: 350 ESVC--GEVYRLRLLGDYH-HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
++ G + ++ D S FV+F E A +A+ +G++L + V P
Sbjct: 138 DTFAQFGNIVSAKVATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGP 194
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EF
Sbjct: 85 EEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFAE 143
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
S AA+ V I+V P +T
Sbjct: 144 RNSVDAAVAMDETVFRGRTIKVLPKRT 170
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 219 SRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIE 277
S ++ +E++ R+VYV ++D T E++ F CG V I D + FA++E
Sbjct: 77 SASTAEAKEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVE 136
Query: 278 FTDEEGARAALNLAGTMLGFYPVRVLPSKTAI 309
F ++E + ALNL + L ++V P +T +
Sbjct: 137 FLEQEAVQEALNLNESELHGRQIKVAPKRTNV 168
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 81 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 139
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E+ ALN + L I+V+P +T V + R PR
Sbjct: 140 QEAVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPR 177
>gi|195586940|ref|XP_002083225.1| GD13472 [Drosophila simulans]
gi|194195234|gb|EDX08810.1| GD13472 [Drosophila simulans]
Length = 541
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 111 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 170
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 171 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 221
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 222 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 279
Query: 401 SPSKTP 406
S TP
Sbjct: 280 GRSITP 285
>gi|6118522|gb|AAF04132.1|AF190745_1 poly-U binding splicing factor [Drosophila melanogaster]
Length = 637
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 192 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 242
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 300
Query: 401 SPSKTP 406
S TP
Sbjct: 301 GRSITP 306
>gi|449487385|ref|XP_004157600.1| PREDICTED: LOW QUALITY PROTEIN: protein MEI2-like 4-like [Cucumis
sativus]
Length = 968
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQV----VDCRICGDPNSVLRFAFIEFTDEEGARAA 287
RT++V +I+ V + +L ALF G + C+ G F I + D AR A
Sbjct: 249 RTLFVRNINSNVEDSELEALFEQYGDIRTLYTACKHRG-------FVMISYYDIRAARNA 301
Query: 288 LNLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
+ L P+R L +I NP+ E+++ T+ N++ V+ ++
Sbjct: 302 M----KALQNKPLRRRKLDIHYSIPKDNPS-------EKDINQGTLVVFNLESSVSNEEL 350
Query: 346 KLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSK 404
+ F V GE+ +R H I F + AE+A+ ALN S + I++ PS+
Sbjct: 351 RQIF-GVYGEIKEIREAPHRSHHKFIEFYDIRAAEAALCALNLSDIA--GKQIKLEPSR 406
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDE-EGARAA 287
+ + ++ + +++E++ ALF G+V C++ + S L +AF++F D + +A
Sbjct: 119 KTNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPLDAGKAI 178
Query: 288 LNLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQAD 344
L G L V+V PS AI N +Y + +K+TQ +
Sbjct: 179 KTLNGLRLQNKTVKVSLARPSSEAIKGAN-----------------LYICGLPRKMTQPE 221
Query: 345 VKLFFESVCGEVYRLRLLGDYHH--STRIAFVEF---VMAESAIAALNCSGVVLGSLPIR 399
++ F S CG + R+L D S +AF+ + AE+AI LN S PI
Sbjct: 222 LEKLF-SACGHIITARILYDTKTGLSRGVAFIRYDQRTEAEAAIRKLNGYLPPGASEPIT 280
Query: 400 VSPSKTPVRPRA 411
V + +P RA
Sbjct: 281 VKFANSPSSNRA 292
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGARAALNL 290
++YV D+ VTE L F G ++ R+C D + L +A+I F A AL+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
ML P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMLKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEDSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC-SGVVL 393
+ S G + ++ D H S FV F E+A A+N +G++L
Sbjct: 117 DTFSTFGNILSCKVACDKHGSRGFGFVHFETHEAAQQAINTMNGMLL 163
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ +++ + + L F G ++ C++ D + F F
Sbjct: 83 RIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDKHGSRGFGF 142
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
+ F E A+ A+N ML + K + F R E E+ AR + TN
Sbjct: 143 VHFETHEAAQQAINTMNGML------LNDRKVFVG----HFKSRRERAAELGARALEFTN 192
Query: 336 IDKKVTQADV------KLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
I K ADV LF S G++ ++++ D +R FV F E A A+
Sbjct: 193 IYVKNLPADVDEQGLQDLF--SQFGKMLSVKVMRDNSGRSRCFGFVNFEKHEEAQKAV 248
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EF
Sbjct: 85 EEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFAE 143
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
S AA+ V I+V P +T
Sbjct: 144 RNSVDAAVAMDETVFRGRTIKVLPKRT 170
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 14/176 (7%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 79 RIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYG 138
Query: 275 FIEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCAR--TIY 332
F+ + E A A+ ML L K + + R EM + IY
Sbjct: 139 FVHYETAEAAETAIKAVNGML-------LNDKKVYVGHHISRKERQSKIEEMKNQFTNIY 191
Query: 333 CTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 388
N+D +VTQ + FE + + D S FV F E A AA+
Sbjct: 192 VKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEA 247
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTD-EEGARAALN 289
++YV ++D VTE L +F G V R+C D + L +A++ + + +G RA
Sbjct: 8 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 67
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L +++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 68 LNYSLIKGRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 115
Query: 350 ESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNC-SGVVL 393
+ G V ++ D H ++ FV + AE+A A+ +G++L
Sbjct: 116 -AAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLL 160
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICG-DPNSVLRFAFIEFTDEEGARAALNLA 291
TV V ++ VTE ++ F G+VVD R N+ RF +++F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 292 GT-------MLGFYPVRVLPSKTAIAPVNPT-FLPRTEDEREMCARTIYCTNIDKKVTQA 343
GT + G LP I+ +PT RT E R I+ +N+D K T+
Sbjct: 920 GTQQEVVGDLAGSAGSMKLPLVVKIS--DPTKRQERTGPTEE--GREIHVSNLDWKATED 975
Query: 344 DVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALNCSGVVLGSLPIRVSP 402
D+ F + G+V R+ + +++ FV F ESA A+L + + S P+ V
Sbjct: 976 DLVELF-AAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAMNEQLFRSRPLHVHI 1034
Query: 403 SKTPVRPR 410
S V R
Sbjct: 1035 STPTVAKR 1042
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALNL 290
R ++VS++D + TE+ L LF GQV RI N + F F+ F +E A A+L +
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 291 AGTMLGFYPVRVLPSKTAIA 310
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGD--PNSVLRFAFIEFTDEEGARAALNL 290
++YV D+ Q VTE L F G ++ R+C D L +A++ F A AL+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 291 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
++ PVR++ S+ R R+ I+ N+DK + D K +
Sbjct: 72 MNFDVIKGRPVRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSI---DNKALY 116
Query: 350 E--SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAAL-NCSGVVL 393
+ S G + +++ D + S FV F E+A A+ +G++L
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 163
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAF 275
R +QR+ +R++ +++ ++D+ + + L F G ++ C++ D N + F
Sbjct: 83 RIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGF 142
Query: 276 IEFTDEEGA-RAALNLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCART---- 330
+ F +E A RA + G +L V V F R E E E+ AR
Sbjct: 143 VHFETQEAAERAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGARAKEFT 191
Query: 331 -IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN 387
+Y N + + +K F S G +R++ D + +R FV F E A A++
Sbjct: 192 NVYIKNFGEDMDDDKLKDIF-SKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVD 249
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA--FIEFTDEEGARAALN 289
+++YV D++ VT+ QL G GQV+ R+C D F ++ F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYEFQPG-GQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALE 97
Query: 290 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFF 349
L L F P+ P + + +P+ R + I+ N+DK + + F
Sbjct: 98 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 146
Query: 350 ESVCGEVYRLRLLGD-YHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIRVSP 402
S G + ++ D S FV++ E+A +A+ + +G+++ P+ V P
Sbjct: 147 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGP 200
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEF-TDEEGARAALNLA 291
+Y+ ++D + ++QL LF G++ C+I D N V + + F+ F T EE ++A +
Sbjct: 322 LYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMN 381
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMC 327
G M+ P+ V F R ED + M
Sbjct: 382 GKMISGKPLYV------------AFAQRKEDRKAML 405
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL 288
+RTV+ + + TE + F G+V D R+ D NS +IEF D A+
Sbjct: 25 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 84
Query: 289 NLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADV 345
L+G +L PV V PS K + + R +Y N+ +T+A++
Sbjct: 85 ALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVTGPYGAVDRKLYVGNLHFNMTEANL 144
Query: 346 KLFFESVCG-EVYRLRLLGDYHHSTRIAFVEFVMAESAIAA 385
+ FE EV +L L + H FV+F E A A+
Sbjct: 145 REIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAS 185
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 318 PRTEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVE 375
P + ER+ RT++ + K T+ DV FF S G+V +RL+ D + S + ++E
Sbjct: 17 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 73
Query: 376 FVMAESAIAALNCSGVVLGSLPIRVSPSKT 405
F A S A+ SG +L P+ V PS+
Sbjct: 74 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 103
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 161 PSLAKTNNNNHG-VNGFNGGFFANNSLIFN-NHNARNG----------NVNANAAVRRKK 208
P+LA N HG +G +G NN ++ N N N G ++ AN+ V
Sbjct: 218 PNLAPVPGNPHGHFSGVSGTLTGNNGVVTNSNSNLGMGPGHSTIGSGNSIGANSTVSSGT 277
Query: 209 SFGQGKRRMNSRTSLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN 268
+ G G R Q +I R +YV +D + E L +F G +V+ + + N
Sbjct: 278 TTGAGPR---------QSSQISR--IYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREGN 326
Query: 269 SVLRFAFIEFTDEEGARAAL-NLAGTMLGFYPVRV 302
F FIE+T +E A AL + +L P+RV
Sbjct: 327 RSKGFCFIEYTSQESAEMALATMNRFVLKGRPIRV 361
>gi|407846855|gb|EKG02815.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 235 YVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLAGTM 294
Y+ +ID+ VT E L +F CG ++DC + G R+ FI+F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 295 LGFYPVRVLPSK 306
L ++V SK
Sbjct: 72 LAGRKIKVGVSK 83
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV----VDC-RICGDPNSVLRFAFI 276
S +++EI +R+VYV ++D T + L A F CG + + C + G P +A+I
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 277 EFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVNPT 315
EF + AA+ + T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 321 EDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVM 378
E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EF
Sbjct: 85 EEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFAE 143
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKT 405
S AA+ V I+V P +T
Sbjct: 144 RNSVDAAVAMDETVFRGRTIKVLPKRT 170
>gi|195167652|ref|XP_002024647.1| GL22585 [Drosophila persimilis]
gi|198467049|ref|XP_001354234.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
gi|194108052|gb|EDW30095.1| GL22585 [Drosophila persimilis]
gi|198149485|gb|EAL31287.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
Length = 653
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFIEFTDEEGARAAL-NL 290
VYV I ++ E+ + F G + + DP + FAF+E+ EGA+ AL +
Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTE---DEREMCART---IYCTNIDKKVTQAD 344
G ++G ++V P+ +P+ + DE + A++ IY +I +++ D
Sbjct: 192 NGALMGGRNIKV---------GRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEED 242
Query: 345 VKLFFESVCGEVY-RLRLLGDYHHSTRIAFVEFV---MAESAIAALNCSGVVLGSLPIRV 400
+K FE+ +Y +L H F+E+ + AIA++N LG +RV
Sbjct: 243 IKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRV 300
Query: 401 SPSKTP 406
S TP
Sbjct: 301 GRSITP 306
>gi|413947084|gb|AFW79733.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
Length = 787
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 224 AQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEG 283
A + ++RTV +S++ +T + + LF CG+VVDC I + A++E++ E
Sbjct: 333 ADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKH----IAYVEYSKPEE 388
Query: 284 ARAAL-----NLAGTMLGFYPVRVLPSK 306
A AAL N+ G L + LPSK
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKSLPSK 416
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAES 381
DE + RT+ +N+ +T VK F +CG+V + H IA+VE+ E
Sbjct: 334 DEADALKRTVQISNLSPLLTVDYVKQLF-GLCGKVVDCTITDSKH----IAYVEYSKPEE 388
Query: 382 AIAALNCSGVVLGSLPIRVSPSKT 405
A AAL + +G P+ V +K+
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKS 412
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 226 REEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGA 284
+E++ R+VYV ++D T E++ F CG V I D + FA++EF ++E
Sbjct: 39 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 98
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAI 309
+ ALNL + L ++V P +T +
Sbjct: 99 QEALNLNESELHGRQIKVAPKRTNV 123
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 320 TEDEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGD-YHHSTRIAFVEFVM 378
E + ++ AR++Y N+D T +V+ F++ CG V R+ +L D + A+VEF+
Sbjct: 36 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 94
Query: 379 AESAIAALNCSGVVLGSLPIRVSPSKTPV---RPRAPR 413
E+ ALN + L I+V+P +T V + R PR
Sbjct: 95 QEAVQEALNLNESELHGRQIKVAPKRTNVPGMKQRPPR 132
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 233 TVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPN--SVLRFAFIEFTDEEGARAALNL 290
++YV D++ V EEQL LF Q+ R+C D S L +A++ F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 291 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQADVKLFFE 350
L F P+ P + + +P+ R+ ++ N+D + + F
Sbjct: 96 ----LNFTPLNGKPIRIMFSQRDPSI-------RKSGHGNVFIKNLDTSIDNKALHDTF- 143
Query: 351 SVCGEVYRLRL-LGDYHHSTRIAFVEF---VMAESAIAALN 387
+ G V ++ L S FV+F A++AI LN
Sbjct: 144 AAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLN 184
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 220 RTSLAQREEIIRRT----VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FA 274
R +QR+ IR++ V++ ++D + + L F G V+ C++ D + + +
Sbjct: 107 RIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYG 166
Query: 275 FIEFTDEEGARAALN-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCA---RT 330
F++F +EE A+ A+ L G ++ V V F+ R E E+ +
Sbjct: 167 FVQFDNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFTN 215
Query: 331 IYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAAL 386
+Y N+ + T D+K F G + ++ D + +R FV F +SA AA+
Sbjct: 216 VYVKNLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAV 271
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 234 VYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR-FAFIEFTDEEGARAALN-LA 291
VYV ++ + T+E L LF G + + D N R F F+ F + + A AA+ L
Sbjct: 216 VYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLN 275
Query: 292 GTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDER-----EMCARTIYCTNIDKKVTQADVK 346
GT + V + A + E ER ++ +Y N+D + +K
Sbjct: 276 GTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLK 335
Query: 347 LFFESVCGEVYRLRLLGDYHHSTR-IAFVEFVMAESAIAALN-CSGVVLGSLPIRVS 401
F S G + +++ D + ++ FV F E A ALN +G ++G P+ V+
Sbjct: 336 DLF-SEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVA 391
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 223 LAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFA-FIEFTDE 281
+++ E++ +Y+ ++D ++E+L LF G + C++ D N + + F+ F+
Sbjct: 309 ISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTP 368
Query: 282 EGARAALN-LAGTMLGFYPVRV 302
E A ALN + G ++G P+ V
Sbjct: 369 EEASKALNEMNGKLIGRKPLYV 390
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 222 SLAQREEIIRRTVYVSDIDQQVTEEQLAALFVGCGQV------VDCRICGDPNSVLRFAF 275
S A +E+I R+V+V ++D T E++ A F CG V VD + G P FA+
Sbjct: 84 SAASKEDIDARSVFVGNVDYSSTPEEVQAHFASCGTVNRVTILVD-KYTGHPKG---FAY 139
Query: 276 IEFTDEEGARAALNLAGTMLGFYPVRVLPSKTAIAPVN 313
+EF D++ A++L T+ ++V P +T + +N
Sbjct: 140 LEFADKDAVNNAMSLNDTVFRGRQLKVTPKRTNVPFMN 177
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 325 EMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESA 382
++ AR+++ N+D T +V+ F S CG V R+ +L D + H A++EF ++
Sbjct: 90 DIDARSVFVGNVDYSSTPEEVQAHFAS-CGTVNRVTILVDKYTGHPKGFAYLEFADKDAV 148
Query: 383 IAALNCSGVVLGSLPIRVSPSKTPV 407
A++ + V ++V+P +T V
Sbjct: 149 NNAMSLNDTVFRGRQLKVTPKRTNV 173
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 222 SLAQREE---IIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLR--FAFI 276
S AQR+ ++ RT Y+ I+ Q+ EE + A F+ G + + D ++ FAF+
Sbjct: 127 SSAQRQRALALMCRT-YIGSINFQLNEESVRASFLPFGPIKMIDLSWDSATMKHKGFAFV 185
Query: 277 EFTDEEGARAAL-NLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTN 335
E+ E A+ AL + ++G ++V + + P ++ + E AR IY ++
Sbjct: 186 EYEIPEAAQLALEQMNNVLMGGRNIKV--GRPSNVPQAAPWIEQILQEARQYAR-IYVSS 242
Query: 336 IDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR--IAFVEFV---MAESAIAALNCSG 390
I ++++D+K FE+ GE+ +L D F+E+ A AI A+N
Sbjct: 243 IHPDLSESDIKSVFEAF-GEILSCKLAPDQLTGKHKGYGFIEYANQSSANDAIVAMNL-- 299
Query: 391 VVLGSLPIRVSPSKTP 406
LG IRV + TP
Sbjct: 300 FDLGGQYIRVGRAITP 315
>gi|389600963|ref|XP_003722977.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504591|emb|CBZ14490.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 404
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 231 RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTDEEGARAALNL 290
R Y+ +ID+ VT + L +F CG ++DC + G RF FI+F E+ A+
Sbjct: 9 RFGCYIGNIDRSVTIDMLRQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKY 68
Query: 291 AG-TMLG 296
G T++G
Sbjct: 69 NGFTLVG 75
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 322 DEREMCARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMA 379
+ER+ ART++C + +K+ D++ FF SV G V +RL+ D + S IA+VEF
Sbjct: 42 EERD--ARTVFCWQLSQKIRPRDMEEFFSSV-GIVRDVRLISDRNSRRSKGIAYVEFQDK 98
Query: 380 ESAIAALNCSGVVLGSLPIRVSPSK 404
S AL SG L S+PI V S+
Sbjct: 99 NSVPLALGLSGQKLLSIPIMVQASQ 123
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 227 EEIIRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNS--VLRFAFIEFTDEEGA 284
EE RTV+ + Q++ + F G V D R+ D NS A++EF D+
Sbjct: 42 EERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSV 101
Query: 285 RAALNLAGTMLGFYPVRVLPSKTAI--APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQ 342
AL L+G L P+ V S+ A N L + +Y ++ +T+
Sbjct: 102 PLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNS----GPMRLYVGSLHFNITE 157
Query: 343 ADVKLFFESVCGEVYRLRLLGDYH--HSTRIAFVEFVMAESAIAAL-NCSGVVLGSLPIR 399
++ FE G++ ++L+ D S F+ F AE A AL +G L P++
Sbjct: 158 EMLRGIFEPF-GKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMK 216
Query: 400 V 400
V
Sbjct: 217 V 217
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 232 RTVYVSDIDQQVTEEQLAALFVGCGQVVDCRI--CGDPNSVLRFAFIEFTDEEGARAALN 289
RTV+ + Q++ L F G+V D R+ C A+IEF D E AL
Sbjct: 171 RTVFCMQLSQRIHARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVALALG 230
Query: 290 LAGTMLGFYPVRV---------LPSKTAIAPV-NPTFLPRTEDEREMCARTIYCTNIDKK 339
L+G L P+ V + S+ +AP NP+ R +Y ++
Sbjct: 231 LSGQKLLGIPISVQHTQAEKNRMASQPPVAPPKNPSGPMR-----------LYVGSLHFN 279
Query: 340 VTQADVKLFFESVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESAIAAL-NCSGVVLGSL 396
+T+ + FE G++ ++L+ D S F+ F A+ A AL +G L
Sbjct: 280 ITEDMLNGIFEPF-GKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNGFELAGR 338
Query: 397 PIRV 400
P++V
Sbjct: 339 PMKV 342
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 328 ARTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLL--GDYHHSTRIAFVEFVMAESAIAA 385
ART++C + +++ D++ FF SV G+V +RL+ IA++EF ES A
Sbjct: 170 ARTVFCMQLSQRIHARDLEEFFSSV-GKVRDVRLITCNKTKRFKGIAYIEFKDPESVALA 228
Query: 386 LNCSGVVLGSLPIRVS---------PSKTPVR-PRAPRLPM 416
L SG L +PI V S+ PV P+ P PM
Sbjct: 229 LGLSGQKLLGIPISVQHTQAEKNRMASQPPVAPPKNPSGPM 269
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,288,686,700
Number of Sequences: 23463169
Number of extensions: 259852060
Number of successful extensions: 1047917
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 4459
Number of HSP's that attempted gapping in prelim test: 1018437
Number of HSP's gapped (non-prelim): 25066
length of query: 417
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 272
effective length of database: 8,957,035,862
effective search space: 2436313754464
effective search space used: 2436313754464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)