Your job contains 1 sequence.
>014874
MNSLTMLSTARIYTPLNHSPQRQRFGGSQSKRNVVFPSLSFRTPKLICMAEPYLITKLES
AAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKE
NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIW
AGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRV
PQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFH
KPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIR
TYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014874
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 1532 3.3e-157 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 792 8.7e-79 1
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 773 9.0e-77 1
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 749 3.1e-74 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 739 3.6e-73 1
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 736 7.5e-73 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 722 2.3e-71 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 722 2.3e-71 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 709 5.5e-70 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 705 1.4e-69 1
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 698 8.0e-69 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 686 1.5e-67 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 679 8.2e-67 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 662 5.2e-65 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 661 6.7e-65 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 657 1.8e-64 1
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 639 1.4e-62 1
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 601 1.5e-58 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 601 1.5e-58 1
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 598 3.2e-58 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 593 1.1e-57 1
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 593 1.1e-57 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 586 5.9e-57 1
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 584 9.6e-57 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 582 1.6e-56 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 582 1.6e-56 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 579 3.3e-56 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 579 3.3e-56 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 558 5.5e-54 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 554 1.5e-53 1
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 551 3.0e-53 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 551 3.0e-53 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 545 1.3e-52 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 540 4.4e-52 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 538 7.2e-52 1
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 525 1.7e-50 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 511 5.2e-49 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 510 6.7e-49 1
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 490 8.8e-47 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 479 1.3e-45 1
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 475 3.4e-45 1
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 456 3.5e-43 1
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 454 5.7e-43 1
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 450 1.5e-42 1
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 433 9.6e-41 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 431 1.6e-40 1
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 399 5.8e-40 2
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 414 9.9e-39 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 411 2.1e-38 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 411 2.1e-38 1
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 410 2.6e-38 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 402 1.9e-37 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 399 3.9e-37 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 396 8.0e-37 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 396 8.0e-37 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 378 6.5e-35 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 364 2.0e-33 1
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 361 4.1e-33 1
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 351 4.7e-32 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 347 1.3e-31 1
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 189 2.7e-12 1
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 189 2.7e-12 1
TAIR|locus:2082563 - symbol:PrfB3 "peptide chain release ... 188 5.6e-12 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 155 1.5e-10 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 155 1.5e-10 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 133 3.8e-08 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 133 3.8e-08 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 123 1.9e-06 1
FB|FBgn0050100 - symbol:CG30100 species:7227 "Drosophila ... 117 2.1e-06 1
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 122 5.4e-05 1
SGD|S000004271 - symbol:YLR281C "Putative protein of unkn... 107 0.00023 1
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
Identities = 308/418 (73%), Positives = 348/418 (83%)
Query: 1 MNS-LTMLSTARIYTPLNHSPQRQRFGGSQSKRNVVF--PSLSFRTPKLICMAEPYLITK 57
MNS +T TAR + L+ SP R S S +V PS S RT +L+CMAEPYLI K
Sbjct: 1 MNSSMTTSPTARAFLHLHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRK 60
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
+ES KTWK+LSVKLADP+VVSN SEYQKLAQSM+ELDEVV+ +R+FKDCEKQL ES+ L
Sbjct: 61 MESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVL 120
Query: 118 AKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEA 177
AKE G+DE+MAEMI PSDPLDARNI+LEVRAG GGDEA
Sbjct: 121 AKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEA 180
Query: 178 GIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRV 237
IW GDLVRMYQ+YSE++SWK +++S SEAE GG+KT VMEIKGNRVYSKLKYESGVHRV
Sbjct: 181 AIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRV 240
Query: 238 QRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
QRVPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELT+ARSGGAGGQNVNKVETAID
Sbjct: 241 QRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAID 300
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
LFHKP+GIRIFCTEERTQ++NK+RA QLLRAKLYEIKVREQQEKIR +R SQVGTGAR+E
Sbjct: 301 LFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSE 360
Query: 358 KIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPS 415
KIRTYNYKD+RVTDHRLKMNF LT+FLDG +++AVQ+CAA+EQKEL+EEL+ESV A S
Sbjct: 361 KIRTYNYKDSRVTDHRLKMNFALTTFLDGALEDAVQACAALEQKELMEELSESVAASS 418
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 149/356 (41%), Positives = 238/356 (66%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ + +++LS ++DPEV+++ +Q ++ AE++E+V YR++K K++E+
Sbjct: 1 MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
+ + E D + E++ P DP D +N+++E+RAGAG
Sbjct: 61 AERMLDEK-LDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY KY+++ WK ++ S + GGFK V+ I+G VYS++K+ESG
Sbjct: 120 GEEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEA+EVEV I+P D+ + + GAGGQ+VNK E
Sbjct: 180 VHRVQRVPTTESGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVFCASGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQE-KIRTQRLSQVGT 352
+A+ + H PTGI + C +E++Q +NK RA+++LRA+L + K R++QE ++ + R SQVGT
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLD-KARQEQEAELASARKSQVGT 298
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
G R+E+IRTYN+ NRVTDHR+ + L + L+G++D + + +Q E L+++
Sbjct: 299 GDRSERIRTYNFPQNRVTDHRIGLTLHRLDAVLEGDLDEIIDALITTDQAERLKQV 354
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 149/358 (41%), Positives = 233/358 (65%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E + +L LADP V+ N E+++L++ +L ++ +YR +K +++E
Sbjct: 1 MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEG 60
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
+R L D EM EM P DP D RN++LE+RAG G
Sbjct: 61 NRELLA----DPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++AGDL RMY +++E+N WK ++S+SE+E+GGFK +V I+G V++KLKYESG
Sbjct: 117 GDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVA++PEA+++EV I+P D+++ R+ GAGGQ+VNK E
Sbjct: 177 THRVQRVPETEAQGRIHTSACTVAVLPEAEDIEVDINPADLKIDVYRASGAGGQHVNKTE 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++N+++A+++L+ K+ + +EQ +I R QVG+G
Sbjct: 237 SAVRITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + + L S ++G+I V + Q E L+ AE+
Sbjct: 297 DRSERIRTYNFPQGRMTDHRIGLTLYRLDSLMEGDIAEVVDALRTHYQMEALKAQAEA 354
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 138/353 (39%), Positives = 227/353 (64%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP ++S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 352
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 143/360 (39%), Positives = 227/360 (63%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P LI KL++ + ++ L+D V+++ Y++L + A+L+ +V +++F+ EK
Sbjct: 2 KPSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKA 61
Query: 111 LEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRA 170
+E + + +E D E+ ++ P DP D RN+ LE+RA
Sbjct: 62 IESAEEMQQEK--DPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRA 119
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GG+EA I+AGDL RMY +Y+E W+ ++S+ E E GGFK V+ + G VYS+LK+
Sbjct: 120 GTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKF 179
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNV 289
ESG HRVQRVP TE+QGR+HTS TVAIMPE DE++ + I+P ++ + T R+ GAGGQ+V
Sbjct: 180 ESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHV 239
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N+ ++AI + H PTG+ + C +ER+Q +NK+RA+ LL++KL + +Q ++ +R S
Sbjct: 240 NRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSL 299
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VG+G R+E+IRTYN+ RVTDHR+ + ++L ++G++D + Q E L EL+
Sbjct: 300 VGSGDRSERIRTYNFPQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIRELQAEQLAELS 359
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 146/353 (41%), Positives = 222/353 (62%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE+ K ++++ +++ PEV+++ + LAQ A+L V YR++K K+LE+
Sbjct: 1 MLERLENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELED 60
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
++ L E DE+M +M+ P DP D ++I++E+RAG G
Sbjct: 61 TKNLL-EIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL +MY +Y+ +WK +I + G K VV E+ G +S+LKYE G
Sbjct: 120 GDEAGLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVPQTEA GR+HTSTATVA++P+ +EV++ I+ D+ + S GAGGQNV KV
Sbjct: 180 VHRVQRVPQTEASGRIHTSTATVAVLPQVEEVDIDINMDDVRVDIFHSSGAGGQNVQKVA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAI L H PTG+ + C +ER+QL+NK++A +LRA+L E++ + E+ R +QVG
Sbjct: 240 TAIRLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQA 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+EKIRTYN+ +R+TDHR+ + L L+G +D + + A EQ ELL+
Sbjct: 300 DRSEKIRTYNFPQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQTELLK 352
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 138/358 (38%), Positives = 227/358 (63%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+++KLES + ++++ L DP V+ + ++++ L++ ++L+E+ ++ ++ ++ L
Sbjct: 5 ILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVA 64
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
+ +A+E+ D EM EM P DP D RN LE+RAGAG
Sbjct: 65 AEEMAQED--DAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAGI+AGDL RMY +++E+ W+ ++SSSEAE GG+K ++ ++ G+ Y LK+ESG
Sbjct: 123 GDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TEAQGR+HTS TVA+MPE E E+ I D+++ T RS GAGGQ+VN
Sbjct: 183 GHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C +ER+Q +NK++A+ +L A++ + + ++ +I R + +G+
Sbjct: 243 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+++IRTYNY RV+DHR+ + + LT ++G++ + + Q + L LA+
Sbjct: 303 GDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQADQLAALAD 360
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 138/358 (38%), Positives = 227/358 (63%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+++KLES + ++++ L DP V+ + ++++ L++ ++L+E+ ++ ++ ++ L
Sbjct: 5 ILSKLESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVA 64
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
+ +A+E+ D EM EM P DP D RN LE+RAGAG
Sbjct: 65 AEEMAQED--DAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAGI+AGDL RMY +++E+ W+ ++SSSEAE GG+K ++ ++ G+ Y LK+ESG
Sbjct: 123 GDEAGIFAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TEAQGR+HTS TVA+MPE E E+ I D+++ T RS GAGGQ+VN
Sbjct: 183 GHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C +ER+Q +NK++A+ +L A++ + + ++ +I R + +G+
Sbjct: 243 DSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+++IRTYNY RV+DHR+ + + LT ++G++ + + Q + L LA+
Sbjct: 303 GDRSDRIRTYNYPQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQADQLAALAD 360
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 140/355 (39%), Positives = 220/355 (61%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +KL+ K +++L+ L+ +++++ S+ L++ L+ +V +++ +EE
Sbjct: 2 LASKLDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEE 61
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
++AL ND E+ E+ P DP D RNI LE+RAGAG
Sbjct: 62 NKALL----NDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++ GDLV+ Y +Y+E +K ++SSSE GGFK ++M +KG YS+LKYE G
Sbjct: 118 GDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+QGRVHTS TVA+MPE D++E+ I+P D+++ RS G GGQ+VN +
Sbjct: 178 THRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + + ++Q +NK A+++L+A+LYE++ E+ K R SQVG+G
Sbjct: 238 SAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFL-DGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NR++DHR+ + + L + + DG D ++ Q + L+E
Sbjct: 298 DRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQALQE 352
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 136/361 (37%), Positives = 224/361 (62%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE + +++ L D V+++ ++ L++ ++L+EVV+ ++ ++ + LE
Sbjct: 5 VIRKLEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLES 64
Query: 114 SRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAG 173
++ + +E+ D EM EM P DP D N +E+RAGAG
Sbjct: 65 AKEMLEED--DAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAGAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E N W+ ++SS+E E GGFK +++++ G Y KLK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGRVHTS TV +M E E E + I+P D+++ T RS GAGGQ+VNK
Sbjct: 183 GHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C ++R+Q +N+++A+ +L A++ ++ +++ + R S V +
Sbjct: 243 DSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTRRSLVAS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
G R+E++RTYN+ RV++HR+ + + L ++G++D + Q +LL LA+
Sbjct: 303 GDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQADLLAALADEQ 362
Query: 412 G 412
G
Sbjct: 363 G 363
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 131/355 (36%), Positives = 221/355 (62%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE + ++++ L+DP +S+ +++ L++ +LD V S + +K E +
Sbjct: 8 KLEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAEDDFSTAEL 67
Query: 117 LAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDE 176
+ K++ D +M EM P DP D N +E+RAGAGGDE
Sbjct: 68 MLKDD--DPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I+AGDL RMY +Y+E+ WK +++S+E+E+GG+K ++M++ G V+ +K+ESG HR
Sbjct: 126 AAIFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP TE+QGRVHTS TV +MPE E + + I+ D+++ T R+ GAGGQ+VNK ++A
Sbjct: 186 VQRVPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSA 245
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
I + H PTG+ + C E+R+Q +N+++A+ +L+A+L + + +++ + + R + V +G R
Sbjct: 246 IRITHIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDR 305
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
+E+IRTYN+ R++DHR+ + + L ++G++ ++ Q +LL ELAE
Sbjct: 306 SERIRTYNFPQGRMSDHRINLTLYRLNEIMEGSLQLVMEPIMQENQADLLAELAE 360
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 133/361 (36%), Positives = 221/361 (61%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P ++ KLE+ + +++ L D + +++ ++ L++ A+L +V + ++ ++
Sbjct: 2 KPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQED 61
Query: 111 LEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRA 170
+E ++ + +D EM EM P DP D RN LEVRA
Sbjct: 62 IETAQMML----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRA 117
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA ++AGDL RMY +Y+E W+ ++S+SE E GG+K ++ +I G+ VY +LK+
Sbjct: 118 GTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKF 177
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNV 289
ESG HRVQRVP TE+QGR+HTS TVA+MPE + E+ I+P D+ + T RS GAGGQ+V
Sbjct: 178 ESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHV 237
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N ++AI + H PTGI + C +ER+Q +NK++AL +L A+++ ++ ++Q+ + R +
Sbjct: 238 NTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNL 297
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+G+G R+++ RTYN+ RVTDHR+ + + L ++G +D ++ Q + L L+
Sbjct: 298 LGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALS 357
Query: 409 E 409
E
Sbjct: 358 E 358
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 139/355 (39%), Positives = 220/355 (61%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L+ + ++ L +AD ++ S+ LA+ ++L VV ++ ++E+RA
Sbjct: 6 RLDQITQRFQYLEAAMADG---ASGSDIAALAKEYSDLRPVVEQIAAWRQLCADMDEARA 62
Query: 117 LAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDE 176
+ +D +M + P D DAR MLE+R G GGDE
Sbjct: 63 ML----SDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGGDE 118
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+RMYQ+Y+E WK LI E E GG K VV I G V+++LKYESGVHR
Sbjct: 119 AALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGVHR 178
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE+ GR+HTS ATVA++PEA +V++ IDP DI + T RS GAGGQ+VN ++A+
Sbjct: 179 VQRVPETESGGRIHTSAATVAVLPEAQDVDIQIDPGDIRIDTMRSSGAGGQHVNTTDSAV 238
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRT-QRLSQVGTGAR 355
+ H P+GI + + E++Q +N+ A+Q+L+ +LY+++ R++ ++ R+ R +QVGTG R
Sbjct: 239 RITHLPSGI-VVTSSEKSQHRNREIAMQVLKTRLYDLE-RQRLDRERSASRSAQVGTGDR 296
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
+E+IRTYN+ R+TDHR+ + ++L + + G++D + + AA Q +L E+ +
Sbjct: 297 SERIRTYNFPQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAADGQARMLAEMGQ 351
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 135/342 (39%), Positives = 215/342 (62%)
Query: 68 LSVKLADPEVVSNPSEYQKLAQSMAELD---EVVSTYRKFKDCEKQLEESRALAKENGND 124
L+ +L PE +++ E+ KL++ AEL E+++ Y+K K+ + LE L K D
Sbjct: 18 LADRLRCPEAIAS-QEFSKLSKEYAELKPKVELIARYKKLKEEQAYLE---LLVKNPLED 73
Query: 125 EEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
+E+ E+ P D DA N+MLEVRAG GGDEA ++A L
Sbjct: 74 QEIREIGKSDLQAIQDVIPKLELEIKRMLLPKDKDDALNVMLEVRAGTGGDEAALFAASL 133
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
MYQKY+E+ W+ +IS S E GG+K I G+ V++KLK+ESGVHRVQRVP+TE
Sbjct: 134 FHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVPETE 193
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
+ GR+HTSTATVA++PE ++V+V I+ KD+ + RS G GGQ+VN ++A+ + H PTG
Sbjct: 194 SAGRIHTSTATVAVLPEPEDVDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTG 253
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
I + +E++Q +N+++A+++LR +LYEI+ + Q++I + R SQ+G+G R+EK RTYN+
Sbjct: 254 IVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNKVQQEISSMRKSQIGSGERSEKTRTYNF 313
Query: 365 KDNRVTDHRLKMN-FELTSFL-DGNIDNAVQSCAAMEQKELL 404
R+TDHR+ + + + + +G ++ +++ + +L
Sbjct: 314 PQGRITDHRINLTTYRINETVKEGELEPIIEALIRENEARML 355
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 129/351 (36%), Positives = 217/351 (61%)
Query: 59 ESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALA 118
E + ++ L +L+ PE + + + ++ ++L ++S K+K +K++ E L
Sbjct: 8 EGLCEKFRILKQQLSAPETLGTQA-FVVASREYSDLLPIMSLIEKYKSTQKEIAELEELV 66
Query: 119 KENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAG 178
D E+ + P D D+RN +LE+RAG GG+EA
Sbjct: 67 NSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEAA 126
Query: 179 IWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQ 238
++ G+L RMY KY+E+ +WK I+ S GG+K I G V+++LK+ESGVHRVQ
Sbjct: 127 LFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRVQ 186
Query: 239 RVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL 298
RVP+TE+ GR+HTS ATVA++PE +EV++ ID KD+ + RS G GGQ+VN ++A+ +
Sbjct: 187 RVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRI 246
Query: 299 FHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEK 358
H PTGI + +E++Q +NKS+AL++LRA+LY ++ ++++E+I R SQ+G+G R+E+
Sbjct: 247 THIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKREEEISKMRKSQIGSGDRSER 306
Query: 359 IRTYNYKDNRVTDHRLKM-NFELTSFL-DGNIDNAVQSCAAMEQKELLEEL 407
IRTYN+ +R+TDHR+ + ++ L + +G++D + + A +Q L+++
Sbjct: 307 IRTYNFLQSRITDHRINLTSYRLDYVMKEGDLDEFIDALVADDQANKLKQI 357
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 134/352 (38%), Positives = 213/352 (60%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
LE ++ + L L DP +S S + ++ +EL V+S ++ +K + L
Sbjct: 7 LEELSQKFYKLKSMLEDPSQLSVDS-FVAASKEYSELLPVISVIDQYNILQKDIAGLEEL 65
Query: 118 AKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEA 177
D E+ + P D DARN +LE+RAG GG+EA
Sbjct: 66 INNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEA 125
Query: 178 GIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRV 237
++ DL RMY KY+EQ +WK I+SS GG K + + I G+ V+++LK+ESGVHRV
Sbjct: 126 ALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFESGVHRV 185
Query: 238 QRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
QRVP+TEA GR+HTS ATVA++PE +EV++ ID KD+ + RS G GGQ+VN ++A+
Sbjct: 186 QRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVR 245
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
+ H P+GI + +E++Q +NKS+AL++LRA+LY ++ +++ +I R SQ+G+G R+E
Sbjct: 246 ITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDAEISQMRKSQIGSGDRSE 305
Query: 358 KIRTYNYKDNRVTDHRLKMN-FELTSFL-DGNIDNAVQSCAAMEQKELLEEL 407
+IRTYN+ +R+TDHR+ + + L + +GN+D +++ A ++ L+ L
Sbjct: 306 RIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAEDEANKLKNL 357
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 135/347 (38%), Positives = 205/347 (59%)
Query: 67 DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEE 126
+L + LADP + SNP+E +++ + A L +V+T+RK LE +R L +DE
Sbjct: 17 ELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETARELV---ASDES 73
Query: 127 MAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVR 186
A +A P DP DA +I+LEV++G GG+E+ ++A DL R
Sbjct: 74 FAAEVAALEARVGELDAQLTDMLA----PRDPHDADDIVLEVKSGEGGEESALFAADLAR 129
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNR-----VYSKLKYESGVHRVQRVP 241
MY +Y+E++ W T++ + ++ GG+K + I V+S++K+E GVHRVQRVP
Sbjct: 130 MYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVP 189
Query: 242 QTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFH 300
TE+QGRVHTS A V + PE +EV +V ID D+ + RS G GGQ VN ++A+ + H
Sbjct: 190 VTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITH 249
Query: 301 KPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIR 360
PTGI + C ER+QLQNK+RALQ+L A+L + + R SQ+ T R+E+IR
Sbjct: 250 LPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERIR 309
Query: 361 TYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEE 406
TYN+ +NR+TDHR+ + L LDG++D + +A +++ L +
Sbjct: 310 TYNFPENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADKQSRLRQ 356
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 126/328 (38%), Positives = 192/328 (58%)
Query: 88 AQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXX 147
AQ E+V+ + D E++L+E++ L + +E++ ++
Sbjct: 55 AQFQVRRPELVAVAKLLSDKEQELQETQHLLHDE--NEDLRKLAENEITSCEKEIAQLKH 112
Query: 148 XXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEA 207
PS+ D +++LEV AG GG EA ++ ++ MYQ+Y+ W + +
Sbjct: 113 QIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPS 172
Query: 208 EKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEV 267
E GG + I G+ Y +K+E GVHRVQRVP+TE QGR+HTST TVAI+P+ E+ +
Sbjct: 173 EIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINL 232
Query: 268 VIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLR 327
VI+PKD+ + T R+ GAGGQ+VN ++A+ + H PTGI C +ER+QL+NK A++ LR
Sbjct: 233 VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLR 292
Query: 328 AKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDG 386
AKLY +++ E+ K R Q+GT R+EKIRTYN+ NRVTDHR+ + +L +F+ G
Sbjct: 293 AKLYSLQLEEETSKRYNARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQG 352
Query: 387 N--IDNAVQSCAAMEQKE-LLEELAESV 411
+D VQS E L+E +A+ V
Sbjct: 353 EYLLDELVQSLKDYANYESLVEIIAKEV 380
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 126/328 (38%), Positives = 192/328 (58%)
Query: 88 AQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXX 147
AQ E+V+ + D E++L+E++ L + +E++ ++
Sbjct: 55 AQFQVRRPELVAVAKLLSDKEQELQETQHLLHDE--NEDLRKLAENEITSCEKEIAQLKH 112
Query: 148 XXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEA 207
PS+ D +++LEV AG GG EA ++ ++ MYQ+Y+ W + +
Sbjct: 113 QIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPS 172
Query: 208 EKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEV 267
E GG + I G+ Y +K+E GVHRVQRVP+TE QGR+HTST TVAI+P+ E+ +
Sbjct: 173 EIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINL 232
Query: 268 VIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLR 327
VI+PKD+ + T R+ GAGGQ+VN ++A+ + H PTGI C +ER+QL+NK A++ LR
Sbjct: 233 VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLR 292
Query: 328 AKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDG 386
AKLY +++ E+ K R Q+GT R+EKIRTYN+ NRVTDHR+ + +L +F+ G
Sbjct: 293 AKLYSLQLEEETSKRYNARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQG 352
Query: 387 N--IDNAVQSCAAMEQKE-LLEELAESV 411
+D VQS E L+E +A+ V
Sbjct: 353 EYLLDELVQSLKDYANYESLVEIIAKEV 380
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 125/347 (36%), Positives = 205/347 (59%)
Query: 66 KDLSVKLADPEVVSNPSEYQKL-AQSMAELD-EVVSTYRKFKDCEKQLEESRALAKENGN 123
+ LS + E+ + PS + L A+ E E+ + ++ +D E++L+++R LA ++
Sbjct: 16 RGLSARPRLDELFAIPSLSRLLKARVQGEAKPELAARIQRLRDKERELQDTRELALQD-E 74
Query: 124 DEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGD 183
E++ ++ PS+ D ++++EV AG GG EA ++ +
Sbjct: 75 SEDLRKLAEREIVSCEEEIAELKHQIVLLLIPSEETDNSDLVMEVTAGVGGQEAMLFTSE 134
Query: 184 LVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQT 243
+ MY++Y+ WK ++ +E GG + V I G Y +K+E GVHRVQRVP+T
Sbjct: 135 IFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAVASIAGLDAYKYMKFEGGVHRVQRVPKT 194
Query: 244 EAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPT 303
E QGR+HTST TVAI+P+ E+E+ I+PKD+ + T R+ GAGGQ+VN ++A+ + H PT
Sbjct: 195 EKQGRIHTSTMTVAILPQPTEMELKINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPT 254
Query: 304 GIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYN 363
G+ C +ER+Q++NK +A+Q+L AKLY IK+ E+ +K + R Q+GT R+EKIRTYN
Sbjct: 255 GVTSECQQERSQIRNKEKAMQMLCAKLYNIKLEEENKKRNSARKIQIGTKGRSEKIRTYN 314
Query: 364 YKDNRVTDHRLKMNFELTS-FLDGN--IDNAVQSCAAMEQKELLEEL 407
+ +R+TDHR+ + T F+ G +D +++ E L E+
Sbjct: 315 FPQDRITDHRISRSVHHTECFMLGEEMLDEMIKTLKEYADYESLMEI 361
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 128/359 (35%), Positives = 208/359 (57%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P ++ +L K K+L + D + SE +K+++ + E E + + + K+L
Sbjct: 73 PNIVFRLNLMGKKSKELR-NMIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKEL 131
Query: 112 EESRALAKENGNDEEMAEMIAXXXXXXXXXXXX-XXXXXXXXXXPSDPLDARNIMLEVRA 170
+E + + E DE+ +MI P DA + +LE+RA
Sbjct: 132 KELQTMLVEE-TDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRA 190
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GG EA ++ D+ MY+ Y Q W + S E GG++ V + + G V+ LKY
Sbjct: 191 GTGGSEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKY 250
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP TE QGR+HTST TVAI+PE +V++ I +D+++ RS G GGQ+VN
Sbjct: 251 ESGVHRVQRVPLTETQGRIHTSTITVAILPEPKDVDIQIHDRDLKVDIYRSSGNGGQSVN 310
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEI-KVREQQEKIRTQRLSQ 349
++A+ + H PTGI + +ER+Q QN+S+A+++L+A++YE ++R Q E++ ++R +Q
Sbjct: 311 TTDSAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNERV-SERNAQ 369
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGN-IDNAVQSCAAMEQKELLEEL 407
+G+ R+E+IRTYNY +R+TDHR+ +N L S ++ + +D+ + + LEEL
Sbjct: 370 IGSALRSERIRTYNYPQDRITDHRVSINGNLNSCMNSDGLDSFIDEILVEFHTKELEEL 428
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 114/334 (34%), Positives = 200/334 (59%)
Query: 80 NPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXX 139
+P E+ + + + +L + + + +K+++ ++L E+ +D++M ++
Sbjct: 80 SPEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAV 139
Query: 140 XXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKC 199
P D D R+ +LEVRAG GG+EA ++A D+ RMY++YS++ WK
Sbjct: 140 EEEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKF 199
Query: 200 TLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIM 259
++ +E++ G+K I G VY KLK+ESG+HRVQR+P TE GR+HTS +VAI+
Sbjct: 200 DIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAIL 259
Query: 260 PEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNK 319
P+ADEV+V + +D+ + T RSGG+GGQ+ N +A+ + H PTG+ + +ER+Q N+
Sbjct: 260 PQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNR 319
Query: 320 SRALQLLRAKLYEI-KVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF 378
++AL++L A+LYEI ++R Q + + R Q+G+G R+ +IRTYN+ RVTDHR+ +
Sbjct: 320 AKALKVLCARLYEIERLRIQSSRSKL-RSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITH 378
Query: 379 E-LTSFLDG-NIDNAVQSCAAMEQKELLEELAES 410
+ + G N+D + + ++ + + + +
Sbjct: 379 HAIEDMMQGENLDMFIDALLLRQEMDAIASFSST 412
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 118/315 (37%), Positives = 188/315 (59%)
Query: 96 EVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXP 155
++ + R + E++L ++ +L + +E++ ++ P
Sbjct: 56 QLAAAARLLNEKERELRDTESLLHDE--NEDLKKLAESEIALCQKEIAELKHRIISLLVP 113
Query: 156 SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV 215
S+ +D +++LEV AG GG EA ++ ++ MYQ+Y+ W + +E GG +
Sbjct: 114 SEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 173
Query: 216 VMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIE 275
I G Y +K+E GVHRVQRVP+TE QGR+HTST TVAI+P+ E+++VI+PKD+
Sbjct: 174 SASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVINPKDLR 233
Query: 276 LTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKV 335
+ T R+ GAGGQ+VN ++A+ + H PTGI C +ER+QL+N+ A++ LRA+LY +++
Sbjct: 234 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRL 293
Query: 336 REQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGN--IDNAV 392
E+ K + R QVGT R+EKIRTYN+ NRVTDHR+ + +L SF+ G+ +D+ +
Sbjct: 294 EEETAKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDLI 353
Query: 393 QSCAAMEQKELLEEL 407
QS E L E+
Sbjct: 354 QSLKDYSDYESLVEM 368
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 122/320 (38%), Positives = 188/320 (58%)
Query: 96 EVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXP 155
E+V+ + + E++L E+ L + E++ ++ P
Sbjct: 63 ELVAVAKLLTEKERELLETEHLLHDES--EDLRKLAENEIISCQKEIAQLKHQIVLLLVP 120
Query: 156 SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV 215
S+ D +++LEV AG GG EA ++ ++ MYQ+Y+ W ++ +E GG +
Sbjct: 121 SEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHA 180
Query: 216 VMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIE 275
I G+ Y +K+E GVHRVQRVP+TE QGR+HTST TVAI+P+ E+ +VI+PKD+
Sbjct: 181 SASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLR 240
Query: 276 LTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKV 335
+ T R+ GAGGQ+VN ++A+ + H PTG+ C +ER+QL+N+ A++ LRAKLY + +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHL 300
Query: 336 REQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGN--IDNAV 392
E+ K R QVGT R+EKIRTYN+ NRVTDHR+ K ++L +F+ G +D V
Sbjct: 301 EEETSKRYNARKVQVGTKGRSEKIRTYNFPQNRVTDHRINKSLYDLGTFMQGEYLLDELV 360
Query: 393 QSCAAMEQKE-LLEELAESV 411
QS E +LE +++ V
Sbjct: 361 QSLKDYANYESVLEIISQKV 380
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 117/315 (37%), Positives = 186/315 (59%)
Query: 96 EVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXP 155
++ + R + E++L ++ +L + +E++ ++ P
Sbjct: 56 QLAAAARLLSEKERELRDTESLLHDE--NEDLKKLAESEIALCQKQITELKHQIISLLVP 113
Query: 156 SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV 215
S+ +D +++LEV AG GG EA ++ ++ MYQ+Y+ W + +E GG +
Sbjct: 114 SEEMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 173
Query: 216 VMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIE 275
+ G Y +K+E GVHRVQRVP+TE QGR+HTST TVAI+P+ E+++VI+PKD+
Sbjct: 174 SASVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEIKLVINPKDLR 233
Query: 276 LTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKV 335
+ T R+ GAGGQ+VN ++A+ + H PTGI C +ER+QL+N+ A++ LRA+LY + +
Sbjct: 234 IDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMHL 293
Query: 336 REQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGN--IDNAV 392
E+ K R QVGT R+EKIRTYN+ NRVTDHR+ + +L SF+ G+ +D+ +
Sbjct: 294 EEETAKRYNARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDMI 353
Query: 393 QSCAAMEQKELLEEL 407
QS E L E+
Sbjct: 354 QSLKDCSDYEALVEM 368
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 115/312 (36%), Positives = 185/312 (59%)
Query: 102 RKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDA 161
+K + +K++E+ + L K+N D E+ E+ P + D
Sbjct: 28 KKLEVKQKEMEDMQDLLKDN--DPELLELAETEKEAVLADIQDLRQKILSLLIPEEESDM 85
Query: 162 RNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKG 221
++LEV AG GG EA ++ ++ MYQ Y+ N W ++ ++ +E GG + + G
Sbjct: 86 SELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSG 145
Query: 222 NRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARS 281
Y KLK+E+GVHRVQRVP+TE++GR HTST TVAI+P+ E+ I+PKD+++ T R+
Sbjct: 146 PLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEISFTINPKDLKIETKRA 205
Query: 282 GGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEK 341
GAGGQ+VN ++A+ + H PTG C +ER+Q++NK A++LLRAKLY ++ E+ +
Sbjct: 206 SGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEETSR 265
Query: 342 IRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGN--IDNAVQSCAAM 398
R Q+GT R+EKIRTYN++ +R+TDHR+ K ++ FL G ++ +
Sbjct: 266 RYQARKLQIGTRGRSEKIRTYNFQQDRITDHRIGKTVHDVHGFLQGEELLEEMIVFLQQF 325
Query: 399 EQKELLEELAES 410
++E L ++ +S
Sbjct: 326 SEQESLMDVLDS 337
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 121/316 (38%), Positives = 184/316 (58%)
Query: 96 EVVSTYRKFKDCEKQLEESRALAKENGND-EEMAEMIAXXXXXXXXXXXXXXXXXXXXXX 154
E+++ + + E++L+E+ L ++ D ++AE
Sbjct: 63 ELLAAAQLLSEKERELQETEQLLRDENEDLRKLAEN--EMTSSSKRGVIFLYLQIILLLV 120
Query: 155 PSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKT 214
PS+ D +++LEV AG GG EA ++ ++ MYQ+Y+ W + +E GG +
Sbjct: 121 PSEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRH 180
Query: 215 VVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDI 274
I G Y +K+E GVHRVQRVP+TE QGR+HTST TVAI+P+ E+ +VI+PKD+
Sbjct: 181 ASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDL 240
Query: 275 ELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIK 334
+ T R+ GAGGQ+VN ++A+ + H PTG+ C +ER+QL+N+ A++ LRAKLY +
Sbjct: 241 RIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMY 300
Query: 335 VREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGN--IDNA 391
+ E+ K + R QVGT R+EKIRTYN+ NRVTDHR+ + +L +F+ G +D
Sbjct: 301 LEEETSKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDEL 360
Query: 392 VQSCAAMEQKELLEEL 407
VQS E L E+
Sbjct: 361 VQSLKDYADYESLVEI 376
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 120/315 (38%), Positives = 184/315 (58%)
Query: 96 EVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXP 155
E+++ + + E++L E+ L + +E++ ++ P
Sbjct: 63 ELLAVIKLLNEKERELRETEHLLHDE--NEDLRKLAENEITLCQKEITQLKHQIILLLVP 120
Query: 156 SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV 215
S+ D +++LEV AG GG EA ++ ++ MYQ+Y+ W + +E GG +
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180
Query: 216 VMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIE 275
I G+ Y +K+E GVHRVQRVP+TE QGRVHTST TVAI+P+ E+ +VI+PKD+
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLR 240
Query: 276 LTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKV 335
+ T R+ GAGGQ+VN ++A+ + H PTG+ C +ER+QL+NK A+ LRAKLY + +
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHL 300
Query: 336 REQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGN--IDNAV 392
E+ K + R Q+G+ R+EKIRTYN+ NRVTDHR+ K +L +F+ G+ +D V
Sbjct: 301 EEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELV 360
Query: 393 QSCAAMEQKELLEEL 407
QS E L E+
Sbjct: 361 QSLKEYADYESLVEI 375
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 126/396 (31%), Positives = 214/396 (54%)
Query: 29 QSKRNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPE-----VVSNPSE 83
+ RN + LS + C + ++ K ++ K ++LS + E + N
Sbjct: 43 RQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEEN 102
Query: 84 YQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKE-NGNDE-EMAEMIAXXXXXXXXX 141
+ L + AEL + + Y++ ++ E+ +EE ++ K N DE ++ E+
Sbjct: 103 RRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQK 162
Query: 142 XXXXXXXXXXXXXPSDPLDARNIMLEVRAG--AGGDEAGIWAGDLVRMYQKYSEQNSWKC 199
P + D +++LEV AG GGD + ++ MYQ YS W+
Sbjct: 163 INMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQF 222
Query: 200 TLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ---TEAQGRVHTSTATV 256
L++ + A+ GG I G+ VY LKYE G+HRVQR+P+ + R+HT T +V
Sbjct: 223 ELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSV 282
Query: 257 AIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL 316
++P+ DEV+V +DPKD+ + T R+ GAGGQ+VNK ++A+ L H PTG+ + C +ER+Q+
Sbjct: 283 IVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQI 342
Query: 317 QNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKM 376
+NK A ++LRA+LY+ + + + + ++ R QVGT A++E+IRTYN+ +RV+DHR+
Sbjct: 343 KNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRIAY 402
Query: 377 NF-ELTSFLDGN--IDNAVQSCAAMEQKELLEELAE 409
++ FL G +D +Q +E + EL +
Sbjct: 403 EVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAELLD 438
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 128/399 (32%), Positives = 218/399 (54%)
Query: 29 QSKRNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPE-----VVSNPSE 83
Q K +V++ L+ + C + K ++ K +DL+ + + + N +
Sbjct: 44 QKKTHVLYQLLNKSWSRGCCHQGTRKLWKHKALQKYMEDLNKEYQTLDQCLQGISENEGD 103
Query: 84 YQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKE-NGNDE-EMAEMIAXXXXXXXXX 141
+ L + A+L + + Y++ ++ E+ +EE +L K N DE ++ E+++
Sbjct: 104 RRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLCKSLNKQDEKQLQELVSEERQIIDQK 163
Query: 142 XXXXXXXXXXXXXPSDPLDARNIMLEVRAG--AGGDEAGIWAGDLVRMYQKYSEQNSWKC 199
P + D +++LEV +G GGD + ++ MYQ YS WK
Sbjct: 164 IHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKF 223
Query: 200 TLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ---TEAQGRVHTSTATV 256
L++ + A+ GG I G+ VY LKYE G+HRVQR+P+ + R+HT T +V
Sbjct: 224 ELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSV 283
Query: 257 AIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL 316
++P+ DEV+V +DPKD+ + T R+ GAGGQ+VN ++A+ L H PTG+ + C +ER+QL
Sbjct: 284 IVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQL 343
Query: 317 QNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKM 376
+NK AL++LRA+LY+ + + + + + R QVGT A++E+IRTYN+ +RVTDHR+
Sbjct: 344 KNKEIALRVLRARLYQQIIEKDRCQQQNARKLQVGTRAQSERIRTYNFTQDRVTDHRIAY 403
Query: 377 NF-ELTSFLDGN--IDNAVQSCAAMEQKELLEE-LAESV 411
++ FL G +D ++ +E + E L ES+
Sbjct: 404 EVRDIKEFLRGEKCLDQLIERLLQSADEEAISEFLDESL 442
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 121/349 (34%), Positives = 197/349 (56%)
Query: 77 VVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKE-NGNDE-EMAEMIAXX 134
+ N + + L + A+L + + Y++ ++ E+ +EE +L K N DE ++ E+++
Sbjct: 97 ISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLCKSLNKQDEKQLQELVSEE 156
Query: 135 XXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAG--AGGDEAGIWAGDLVRMYQKYS 192
P + D +++LEV +G GGD + ++ MYQ YS
Sbjct: 157 RQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYS 216
Query: 193 EQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ---TEAQGRV 249
WK L++ + A+ GG I G+ VY LKYE G+HRVQR+P+ + R+
Sbjct: 217 YYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 276
Query: 250 HTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFC 309
HT T +V ++P+ DEV+V +DPKD+ + T R+ GAGGQ+VN ++A+ L H PTG+ + C
Sbjct: 277 HTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVEC 336
Query: 310 TEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRV 369
+ER+QL+NK AL++LRA+LY+ + + + + + R QVGT A++E+IRTYN+ +RV
Sbjct: 337 QQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNARKLQVGTRAQSERIRTYNFTQDRV 396
Query: 370 TDHRLKMNF-ELTSFLDGN------IDNAVQSCAAMEQKELLEELAESV 411
TDHR+ ++ FL G I+ +QS E L+E +SV
Sbjct: 397 TDHRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAISEFLDESLQSV 445
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 122/370 (32%), Positives = 202/370 (54%)
Query: 58 LESAAKTWKDLSVKL-ADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
LE+ +K ++ + L AD + N E + L + A+L V + +++ ++ E +L+E
Sbjct: 48 LETLSKEYQQVDHLLNADSK---NEFEQRTLRRRRADLSPVATAFQEIREAESELQELET 104
Query: 117 LAKE-NGNDE-EMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAG--A 172
+ +E + DE ++ E+ P + D +++LEV AG
Sbjct: 105 MCRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTT 164
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGD + ++ MYQ Y++ W +++ AE GG I G+ VY LKYE
Sbjct: 165 GGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEG 224
Query: 233 GVHRVQRVPQTEAQGR---VHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNV 289
G HRVQR+P+T R +HT T +V ++P+ +EV+V +DPKD+ + T R+ GAGGQ+V
Sbjct: 225 GTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHV 284
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NK ++A+ + H PTG+ + C +ER+Q NK AL+ LRAKLY+ + +Q + ++ R Q
Sbjct: 285 NKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQSARKLQ 344
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGN--IDNAVQSCAAMEQKELLEE 406
+GT A++E+IRTYN+ +RVTDHR+ + + L G +D + + E L E
Sbjct: 345 LGTRAQSERIRTYNFTQDRVTDHRISYDARNIKEILSGKEELDKLINRLLEFAEMEALTE 404
Query: 407 LAESVGAPSG 416
E++ + G
Sbjct: 405 YLENLQSVGG 414
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 122/396 (30%), Positives = 213/396 (53%)
Query: 29 QSKRNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPE-----VVSNPSE 83
+++ + V L+ + C + ++ K ++ K +DL+ + + + ++ +
Sbjct: 45 RNRNHTVHRLLNKNCSRRYCHQDTSMLWKHKALQKYMEDLNKEYQTLDHCLHHISASEGD 104
Query: 84 YQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKE-NGNDE-EMAEMIAXXXXXXXXX 141
+ L + AEL + Y++ ++ E+ +EE ++ K N DE ++ E+
Sbjct: 105 RRSLTRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTIAQK 164
Query: 142 XXXXXXXXXXXXXPSDPLDARNIMLEVRAG--AGGDEAGIWAGDLVRMYQKYSEQNSWKC 199
P + D +++LEV +G GGD + ++ MYQ YS W+
Sbjct: 165 INMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRF 224
Query: 200 TLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ---TEAQGRVHTSTATV 256
L++ + A+ GG I G+ VY LKYE G+HRVQR+P+ + R+HT T +V
Sbjct: 225 ELLNYTPADYGGLHHAAARISGDNVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSV 284
Query: 257 AIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL 316
++P DEV+V +DPKD+ + T R+ GAGGQ+VN ++A+ L H PTG+ + C +ER+Q+
Sbjct: 285 IVLPHPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQI 344
Query: 317 QNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKM 376
+NK AL++LRA+LY+ + + + + R+ R QVGT A++E+IRTYN+ +RVTDHR+
Sbjct: 345 KNKEIALRVLRARLYQQIIEKDKCQQRSARKLQVGTRAQSERIRTYNFTQDRVTDHRIAY 404
Query: 377 NFE-LTSFLDGN--IDNAVQSCAAMEQKELLEELAE 409
+ FL G +D +Q +E + E +
Sbjct: 405 EVRNIKEFLCGEKCLDQLIQRLLQSADEEAITEFLD 440
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 120/362 (33%), Positives = 199/362 (54%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
+E K ++ L L V N + + L + AEL + + Y++ ++ E+ +EE ++
Sbjct: 78 MEDLNKEYRTLDQCLQHLSV--NEGDRKSLNRRHAELAPLAAIYQEIQEAEQAIEELDSM 135
Query: 118 AKE-NGNDE-EMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAG--AG 173
K + DE ++ E+ P + D ++++EV +G G
Sbjct: 136 CKSLSKQDEKQLQELALEERQTIAEKINVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTG 195
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GD + ++ MYQ YS +WK L++ + A+ GG I G+ VY LKYE G
Sbjct: 196 GDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGGLHHAAARISGDNVYKHLKYEGG 255
Query: 234 VHRVQRVPQTEAQGR---VHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
VHRVQR+P+ R +HT T +V ++P+ DEV+V +DPKD+ + T R+ GAGGQ+VN
Sbjct: 256 VHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVN 315
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
++A+ L H PTG+ + C +ER+Q++NK AL++LRA+LY+ + + + + ++ R QV
Sbjct: 316 TTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKDKCQQQSTRKLQV 375
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGN--IDNAVQSCAAMEQKELLEEL 407
GT A++E+IRTYN+ +RVTDHR+ + FL G +D +Q +E + E
Sbjct: 376 GTRAQSERIRTYNFTQDRVTDHRIAYEVRGIKEFLCGEKCLDQLIQRLLHSADEEAITEF 435
Query: 408 AE 409
+
Sbjct: 436 LD 437
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 118/358 (32%), Positives = 199/358 (55%)
Query: 29 QSKRNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPE-----VVSNPSE 83
+ RN + LS + C + ++ K ++ K ++LS + E + N
Sbjct: 56 RQNRNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEEN 115
Query: 84 YQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKE-NGNDE-EMAEMIAXXXXXXXXX 141
+ L + AEL + + Y++ ++ E+ +EE ++ K N DE ++ E+
Sbjct: 116 RRSLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQK 175
Query: 142 XXXXXXXXXXXXXPSDPLDARNIMLEVRAG--AGGDEAGIWAGDLVRMYQKYSEQNSWKC 199
P + D +++LEV AG GGD + ++ MYQ YS W+
Sbjct: 176 INMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQF 235
Query: 200 TLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ---TEAQGRVHTSTATV 256
L++ + A+ GG I G+ VY LKYE G+HRVQR+P+ + R+HT T +V
Sbjct: 236 ELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSV 295
Query: 257 AIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL 316
++P+ DEV+V +DPKD+ + T R+ GAGGQ+VNK ++A+ L H PTG+ + C +ER+Q+
Sbjct: 296 IVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQI 355
Query: 317 QNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRL 374
+NK A ++LRA+LY+ + + + + ++ R QVGT A++E+IRTYN+ +RV+DHR+
Sbjct: 356 KNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRI 413
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 120/363 (33%), Positives = 200/363 (55%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPS-EYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+E +K ++ L L + +S P + + L + AEL + Y++ ++ E+ +EE +
Sbjct: 80 MEDLSKEYQTLDRCL---QHISAPEGDRRSLNRRHAELAPLAVIYKEIQEAEQAIEELES 136
Query: 117 LAKE-NGNDE-EMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAG--A 172
+ K N DE ++ E+ P + D +++LEV +G
Sbjct: 137 MCKSLNKQDEKQLQELALEEKRTIAQKINMLYHELFQSLVPKEKYDKNDVILEVTSGRTT 196
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGD + ++ MYQ YS W L++ + A+ GG I G VY LKYE
Sbjct: 197 GGDICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHAAARISGANVYKHLKYEG 256
Query: 233 GVHRVQRVPQ---TEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNV 289
G+HRVQR+P+ + R+HT T +V ++P+ DEV+V +DPKD+ + T R+ GAGGQ+V
Sbjct: 257 GIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHV 316
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N ++A+ L H PTG+ + C +ER+Q++NK AL++LRA+LY+ + +++ + ++ R Q
Sbjct: 317 NTTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQQIIEKEKCQQQSARKLQ 376
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGN--IDNAVQSCAAMEQKELLEE 406
VGT A++E+IRTYN+ +RVTDHR+ + FL G +D +Q +E + E
Sbjct: 377 VGTRAQSERIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLDLLIQRLLQTADEEAITE 436
Query: 407 LAE 409
+
Sbjct: 437 FLD 439
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 120/360 (33%), Positives = 191/360 (53%)
Query: 54 LITKLESAAKTWKDL-SVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
LI K S + + V D ++N ++ LA+ +A L V + Y KFK +Q+
Sbjct: 37 LIEKARSLSSEYLQFHQVNNKDQSAMTNDTD---LAKRIARLRRVHNAYSKFKSLSEQIS 93
Query: 113 ESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGA 172
+ + + + +D E+ M P A ++E+R G
Sbjct: 94 DLKQMEAQE-SDAEVKMMAVTEINEISNKIPKSIEDLENTLLPQADSYALPALIEIRPGV 152
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV---VMEIKGNRVYSKLK 229
GG EA I+A +LV MY +Y+ W C IS S + G + + + I+G Y L
Sbjct: 153 GGTEAAIFANELVEMYFQYANFKGWNCKFISKSAVQ--GLEAITEAIFSIEGEGAYGHLM 210
Query: 230 YESGVHRVQRVPQTEAQGRVHTSTATVAIMPEA--DEVEVVIDPKDIELTTARSGGAGGQ 287
E GVHRVQR P TE +GRVHTSTA+V ++P+ DE + D ++++ RS GAGGQ
Sbjct: 211 LEGGVHRVQRTPATETKGRVHTSTASVIVLPQVSNDESSSLYDSSEVKIEVMRSRGAGGQ 270
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
+VN+ E+A+ L H PTGI + + R+Q QNK +A +L ++L + ++ E R +R
Sbjct: 271 HVNRTESAVRLTHIPTGITVSMQDSRSQHQNKEKAFLVLNSRLAALNAAKENEAERLKRK 330
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGN--IDNAVQSCAAMEQKELL 404
+QV + R+EK+RTYN+ NRVTDHR+ ++ +L++F+ G D ++ +++LL
Sbjct: 331 NQVTSSDRSEKLRTYNFNQNRVTDHRIGLSMHDLSTFMQGEEKFDEFLEKIRIWNREQLL 390
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 111/311 (35%), Positives = 176/311 (56%)
Query: 103 KFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDAR 162
K D +L + R + + EEM ++ P + LD
Sbjct: 76 KVSDGRSELSQLRTIINDPKETEEMRKLAEVDVESIEENLETELQELAVKIVPLNNLDVL 135
Query: 163 N-IMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKG 221
+ +E+ GAGG EA ++ G+L+ MYQK + NSWK + GG ++ ++ + G
Sbjct: 136 SKCQIELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVPLGGVRSALIAVSG 195
Query: 222 NRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARS 281
+VY+K+++E+GVHRVQRVP ++ R+HTSTA+++++PE +EV VV+ +++ R+
Sbjct: 196 EKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSVKIEAMRA 253
Query: 282 GGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEK 341
G GGQNVNK TA+ + HK TGI + C +ER Q N A + L A L + +V EK
Sbjct: 254 SGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQKQVDAMLEK 313
Query: 342 IRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQ 400
I ++R QVG+ ARAEKIRTYN++ +RVTDHR++M+ + FL +Q+ Q
Sbjct: 314 IVSKRKLQVGSKARAEKIRTYNFQHDRVTDHRIQMSITGVAEFLSAG--ETLQTMIERLQ 371
Query: 401 KELLEELAESV 411
++ LE+ + +
Sbjct: 372 EQHLEDRLDHI 382
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 101/232 (43%), Positives = 147/232 (63%)
Query: 179 IWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQ 238
++ ++ MYQ+Y+ W + +E GG + I G Y +K+E GVHRVQ
Sbjct: 2 LFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQ 61
Query: 239 RVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL 298
RVP+TE QGR+HTST TVAI+P+ E+ +VI+PKD+ + T R+ GAGGQ+VN ++A+ +
Sbjct: 62 RVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIHTKRASGAGGQHVNTTDSAVRI 121
Query: 299 FHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEK 358
H PTG+ C +ER+QL+N+ A++ LRAKLY + + E+ K + R QVGT R+EK
Sbjct: 122 VHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRYSARKIQVGTKGRSEK 181
Query: 359 IRTYNYKDNRVTDHRLKMNF-ELTSFLDGN--IDNAVQSCAAMEQKELLEEL 407
IRTYN+ NRVTDHR+ + +L +F+ G +D VQS E L E+
Sbjct: 182 IRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELVQSLKDYADYESLVEI 233
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 132/396 (33%), Positives = 203/396 (51%)
Query: 28 SQSKRNVVFPS-LSFRTPKLICMAEPYLITKLESAAKTW-KDLSVKLADPEVVSNPSEYQ 85
+ SK N P+ + +P L+ AE Y E+ K KDLS + V+ Y
Sbjct: 34 TNSKSNGSIPTQYTELSPLLVKQAEKY-----EAELKDLDKDLSCGIHFD--VNKQKHYA 86
Query: 86 KLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXX 145
KL+ E + K ++ + +L E ++E AE++
Sbjct: 87 KLSALTDTFIEYKEKLNELKSLQEMIVSDPSLRAEA--EQEYAELVPQYETTSSRLVNKL 144
Query: 146 XXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSS 205
P P + +LE+R G GG EA I+ +L+ MY Y+ WK +IS +
Sbjct: 145 L--------PPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKN 196
Query: 206 EAEKG-GFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPE-AD 263
E E G G ++ I+ Y +L++E+GVHRVQR+P TE +GR HTSTA V ++P+ D
Sbjct: 197 ENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGD 256
Query: 264 EVEVVID-------PKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL 316
E ID P +I + R+ G GGQ+VN ++A+ L H P+GI + +ER+Q
Sbjct: 257 ESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQH 316
Query: 317 QNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKM 376
+NK++A +LRA+L E + E++EK R R SQV + R++KIRTYN+ NR+TDHR
Sbjct: 317 KNKAKAFTILRARLAEKERLEKEEKERKARKSQVSSTNRSDKIRTYNFPQNRITDHRCGF 376
Query: 377 NF-ELTSFLDGN-IDNAVQSCAAMEQKELLEELAES 410
+L L G +D +++ + + E +EL ES
Sbjct: 377 TLLDLPGVLSGERLDEVIEAMSKYDSTERAKELLES 412
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 112/362 (30%), Positives = 194/362 (53%)
Query: 36 FPSLSFRTPKLICMA--EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAE 93
FP + T + + P L+ + ++ + K+LS KLAD + ++ ++
Sbjct: 30 FPRFNSSTGSSLTIPTLSPSLLQRAQTIQQEHKELSEKLADKYIPDLQVKFDNYTNILSM 89
Query: 94 LDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXX 153
D++ + +++ + ++ + L KE EE+ ++
Sbjct: 90 FDKLETLTQEYIELT-EITDDPDLYKEA--QEELKSIVIPQIEKLVSELRVKLRP----- 141
Query: 154 XPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFK 213
P D + ++E+R G GG+EA ++ GDL+ MY ++ + +WK +IS + G
Sbjct: 142 -PVKYAD-KGCIIELRPGVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFIN 199
Query: 214 TVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-------- 265
++ I Y +++ESGVHRVQR+P+TE +GRVHTSTA V ++P+ E
Sbjct: 200 EAILSIDTLGSYDIMRHESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDD 259
Query: 266 EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQL 325
E V P ++ + T R+GG GGQ+VN ++A+ L H PTG+ + +ER+Q NK++A +
Sbjct: 260 ERVFAPGEVRIDTMRAGGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAI 319
Query: 326 LRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFL 384
LR++L + + E+ K + R QV + R++KI+TYNYK+NRVTDHR+ + +L L
Sbjct: 320 LRSRLAQKEQEEEMLKQKKLRTDQVSSTDRSDKIKTYNYKENRVTDHRINYSMHDLEGVL 379
Query: 385 DG 386
+G
Sbjct: 380 EG 381
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 109/336 (32%), Positives = 183/336 (54%)
Query: 80 NPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXX 139
N Y +LAQ L+ VVS + + E+ + ++ + E DE+M E++
Sbjct: 52 NSKSYARLAQ----LEGVVSALEQRRVLERHITSAKDMEAEK--DEDMRELMREENEVYV 105
Query: 140 XXXXXXXXXXXXXXXP-SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWK 198
SD + ++ + AGAGG EA ++A +L MY Y E W+
Sbjct: 106 DLLGKQDQALLQELLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWE 165
Query: 199 CTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAI 258
+S + GG + + + G + L+YE+GVHRVQRVP TE GR+HTSTA++ +
Sbjct: 166 WEEFASEGTDIGGLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITV 225
Query: 259 MPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQN 318
+P +++V I KD+++ T R+ GAGGQ+VN ++A+ + H PTG+ + ER+QL+N
Sbjct: 226 IPRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKN 285
Query: 319 KSRALQLLRAKLYEIKVRE-QQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMN 377
+ A++ LR++L + ++ + K+ T++ Q G+ R EKIRTYN+ +R+TDHR++
Sbjct: 286 RELAMKRLRSRLVQQQLESVEASKMATKKAQQ-GSLNRNEKIRTYNFVQDRITDHRIQGG 344
Query: 378 --FELTSFLDGN--IDNAVQSCAAMEQKELLEELAE 409
L FL G + ++ ++E L+EL +
Sbjct: 345 TLHNLNGFLKGGDQLSGLIEKLQLEHRRERLKELLD 380
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 103/333 (30%), Positives = 185/333 (55%)
Query: 66 KDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDE 125
++++ +L P+V + P Q L + + L+ VV T + K + + LA E ++E
Sbjct: 35 EEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEE 94
Query: 126 EMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLV 185
E +A S D+ + L+++AG+GG EA WA L
Sbjct: 95 TFNEAVAELDALEEKLAQLEFRRMF-----SGEYDSADCYLDIQAGSGGTEAQDWASMLE 149
Query: 186 RMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEA 245
RMY +++E +K +I SE E G K+V ++I G+ Y L+ E+GVHR+ R ++
Sbjct: 150 RMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDS 209
Query: 246 QGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
GR HTS ++ + PE D+ +++ I+P D+ + R+ GAGGQ+VN+ E+A+ + H PTG
Sbjct: 210 GGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRITHIPTG 269
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQ--QEKIRTQRLSQVGTGARAEKIRTY 362
I C +R+Q +NK +A++ ++AKLYE++++++ +++ S +G G++ IR+Y
Sbjct: 270 IVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQ---IRSY 326
Query: 363 NYKDNRVTDHRLKMNFELT-SFLDGNIDNAVQS 394
D+R+ D R + T + LDG++D +++
Sbjct: 327 VLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEA 359
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 115/381 (30%), Positives = 188/381 (49%)
Query: 32 RNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSM 91
+ +++ +T KL+ P L+T+ + A +LS +L +P K+A+
Sbjct: 22 QRLLYQRRGLQTDKLL---SPALLTRARNLAAEHANLSNQLTTS---FDP----KIARRA 71
Query: 92 AELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXX 151
EL V + ++ + + + E ++ ++ + E+ +
Sbjct: 72 GELGPVAKAWAEWSNANESMSELHSMLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKR 131
Query: 152 XXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEK-- 209
P P + +LE+R GAGGDEA I+A +L++MY + + TL+ +
Sbjct: 132 ALVPRHPFADLSCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRA 191
Query: 210 GGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV---- 265
V+E++ Y L+ ESGVHRVQRVP TEA+GR HTS +V ++P +
Sbjct: 192 DALTEAVLEVEAEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGD 251
Query: 266 ----------EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQ 315
+ IDP+++ R+ GAGGQ+VNK E+AI L H PTGI + + R+Q
Sbjct: 252 GAFNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQ 311
Query: 316 LQNKSRALQLLRAKLYEIK--VREQQ-EKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDH 372
N+ +A Q+LRAKL E + REQ+ ++R + +G R +K+RTYNY +R TDH
Sbjct: 312 HANRKKAWQILRAKLAEARQEAREQELVELRRGAMGGIGRMGRGDKVRTYNYGQSRCTDH 371
Query: 373 RLKMNFELTSFLDGNIDNAVQ 393
R + F N+DN ++
Sbjct: 372 R-------SGFTVHNLDNVLE 385
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 107/335 (31%), Positives = 180/335 (53%)
Query: 68 LSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEM 127
L+ K +P+ N +E QK + + L + + Y + +++L L +E N+E
Sbjct: 35 LTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEELLKAQEELTVLLQLLEEEENEE-- 92
Query: 128 AEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRM 187
+A S P D + ++ + AGAGG EA W L RM
Sbjct: 93 ---LAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSLHAGAGGTEAQDWVEMLYRM 149
Query: 188 YQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQG 247
Y +++E +K LI E+ G K+V ++G Y LK E GVHR+ R+ + G
Sbjct: 150 YTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYLKAERGVHRLIRISPFDFSG 209
Query: 248 RVHTSTATVAIMPE-ADEV-EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 305
R HTS A+V ++PE A+++ E+ + +++++ T RSGGAGGQ+VNK E+A+ + H PTGI
Sbjct: 210 RRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGGQHVNKTESAVRITHLPTGI 269
Query: 306 RIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYK 365
+ C ER+QL N++ A +LL+AKL ++++++++E++ R Q A +IRTY +
Sbjct: 270 TVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLRGEQKEI-AWGSQIRTYVFH 328
Query: 366 D-NRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAM 398
+ V DHR + ++ +DG ID +++ M
Sbjct: 329 PYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 88/231 (38%), Positives = 147/231 (63%)
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ---T 243
MYQ ++ +W L + + AE GG + + G V+ LK+E G HRVQR+P+ +
Sbjct: 4 MYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEVGLS 63
Query: 244 EAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPT 303
R+HT T TV ++P+ +EV++ I PKD+ + T RS GAGGQ+VN ++A+ L H PT
Sbjct: 64 SRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVHLPT 123
Query: 304 GIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYN 363
G C + R+QL+N+ AL++LRA+L++ + +Q+E+ T R QVGT A++E+IRTYN
Sbjct: 124 GTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTARRLQVGTRAQSERIRTYN 183
Query: 364 YKDNRVTDHRLK-MNFELTSFLDG--NIDNAVQSCAA-MEQKELLEELAES 410
+ +RVTDHR+ + ++ F+ G +++ ++ +++ELL+ L ++
Sbjct: 184 FTQDRVTDHRIGFVTRDIKEFMRGAEGLEDLLRLLQENQDREELLKLLKDN 234
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 87/237 (36%), Positives = 145/237 (61%)
Query: 160 DARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEI 219
D +N ++ + GAGG E+ WA L RMY ++ E+ +K + E E+ G K V +
Sbjct: 123 DGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLV 182
Query: 220 KGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTT 278
KG Y LK E+G+HR+ R ++ GR HTS ++V + PE D+ +E+ I+ KDI +
Sbjct: 183 KGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDY 242
Query: 279 ARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQ 338
R+ GAGGQ+VNK E+A+ + H PTGI + C +R+Q +NK+ A ++L+++LYE+++ +Q
Sbjct: 243 YRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQ 302
Query: 339 QEKIRTQRLSQVGTGARAEKIRTYN-YKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQ 393
Q+ T S++G G +IR+Y + +V D+R F ++ + LDG+I ++
Sbjct: 303 QDSANTGEKSEIGWG---HQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIE 356
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 399 (145.5 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 91/246 (36%), Positives = 142/246 (57%)
Query: 156 SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV 215
S P D ++ + AGAGG +A WA L+RMY ++ E+ +K ++ S E+ G K+
Sbjct: 199 SGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSA 258
Query: 216 VMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADE--VEVVIDPKD 273
+EI+G Y + E G HR+ R ++G TS + V +MP E V + I +D
Sbjct: 259 TLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEED 318
Query: 274 IELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEI 333
++++ R+GG GGQNVNKVETA+ + H PTG+ + CTEER+QL NK+RAL L+AKL I
Sbjct: 319 LDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVI 378
Query: 334 KVREQQEKIRTQRLSQVGTGARAE---KIRTYNYKDNR-VTDHRL-KMNFELTSFLDGNI 388
++ +I+ R G +AE +IR Y + + V D R ++TS +DG++
Sbjct: 379 AEEQRATEIKEIR----GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDL 434
Query: 389 DNAVQS 394
D +++
Sbjct: 435 DPFIKA 440
Score = 43 (20.2 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 22/89 (24%), Positives = 35/89 (39%)
Query: 36 FPSLS-FRTPKLICMAEPYLITKLESAAKTW---------KDLSVKLADPEVVSNPSEYQ 85
F S S F +P + E L E+ W KD+ + A E + + Q
Sbjct: 46 FSSSSRFNSPIVFAAQESNLSVSNENETSEWLMQDFYTLRKDVEIASARVEEIRASANLQ 105
Query: 86 KLAQSMAELDEVVSTYRKFKDCEKQLEES 114
+L Q + L E +T F D + +E+
Sbjct: 106 QLEQEITNL-ESKATDTSFWDDRTKAQET 133
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 103/341 (30%), Positives = 169/341 (49%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
++S + ++L ++A P N E QK+ + +++++ + + +Q ++ R L
Sbjct: 25 IDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLN---RQADDIRVL 81
Query: 118 AK--ENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGD 175
+ E DE + + S P D + + + AGAGG
Sbjct: 82 IELGEEAQDEATLDEVRALNDSLEREVEGAEFQRML----SGPHDKNSCFVSINAGAGGT 137
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA WA L+RMY +Y E+ WK + ++ G K+ + G Y LK E+G+H
Sbjct: 138 EAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIH 197
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
R+ R+ ++ R HTS A+V + PE D++E+ I D+ + T RS GAGGQ+VN ++
Sbjct: 198 RLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVNTTDS 257
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYE--IKVREQQEKIRTQRLSQVGT 352
A+ L H PTGI + C ER+Q NK+ AL++LRAKLYE ++ RE Q +G
Sbjct: 258 AVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDIGW 317
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAV 392
G++ + YK V D R + + LDG +++ V
Sbjct: 318 GSQIRSYVLHPYK--MVKDLRTGVESGNPDAVLDGALEDFV 356
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 112/348 (32%), Positives = 179/348 (51%)
Query: 55 ITKLESAAKTWK--DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
+ +L+ AAK + +L A P+ + QK + +A V +R + L
Sbjct: 16 MVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVNDLL 75
Query: 113 ESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGA 172
E AL E D + I S D+RN +L V AGA
Sbjct: 76 ELFALTHE---DPSLGNEIEREVNTLTAEIDTLEVGLAF----SGQYDSRNALLTVHAGA 128
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GG E+ WAG L+RM+ +++E+ + ++ S E+ G K+ ++I+G Y LK E
Sbjct: 129 GGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEH 188
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTTARSGGAGGQNVNK 291
GVHR+ R+ +A HTS A V +MPEA D V++ I P+DI++ RS G GGQNV K
Sbjct: 189 GVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQK 248
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVR---EQQEKIRTQRLS 348
V TA+ + H P+GI + ER+Q QN+ A+++L +KL +++ E++ KI+ +R+S
Sbjct: 249 VSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERIS 308
Query: 349 -QVGTGARAEKIRTYNY-KDNRVTDHRLKMNFELTSFLDGNIDNAVQS 394
+ G R+ + Y KD+R TD+ + N E + L+G +D + +
Sbjct: 309 AEWGNQIRSYVLHPYKMVKDHR-TDYEVG-NAE--AVLEGELDGFINA 352
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 112/348 (32%), Positives = 179/348 (51%)
Query: 55 ITKLESAAKTWK--DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
+ +L+ AAK + +L A P+ + QK + +A V +R + L
Sbjct: 16 MVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVNDLL 75
Query: 113 ESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGA 172
E AL E D + I S D+RN +L V AGA
Sbjct: 76 ELFALTHE---DPSLGNEIEREVNTLTAEIDTLEVGLAF----SGQYDSRNALLTVHAGA 128
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GG E+ WAG L+RM+ +++E+ + ++ S E+ G K+ ++I+G Y LK E
Sbjct: 129 GGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEH 188
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEA-DEVEVVIDPKDIELTTARSGGAGGQNVNK 291
GVHR+ R+ +A HTS A V +MPEA D V++ I P+DI++ RS G GGQNV K
Sbjct: 189 GVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQK 248
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVR---EQQEKIRTQRLS 348
V TA+ + H P+GI + ER+Q QN+ A+++L +KL +++ E++ KI+ +R+S
Sbjct: 249 VSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERIS 308
Query: 349 -QVGTGARAEKIRTYNY-KDNRVTDHRLKMNFELTSFLDGNIDNAVQS 394
+ G R+ + Y KD+R TD+ + N E + L+G +D + +
Sbjct: 309 AEWGNQIRSYVLHPYKMVKDHR-TDYEVG-NAE--AVLEGELDGFINA 352
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 104/344 (30%), Positives = 175/344 (50%)
Query: 59 ESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALA 118
E+A ++ + ++ DP + NP QKL M E +V +K E L ++ L
Sbjct: 26 ETAQHRLEEFNARVEDPNLWDNPENAQKL---MRERQTLVDALDIYKGIETDLADNIELI 82
Query: 119 KENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAG 178
E G E+ ++I + D + LE+ AGAGG E+
Sbjct: 83 -ELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEA-DGNDTFLEINAGAGGTESC 140
Query: 179 IWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQ 238
WA L RMY +++E+ +K L S S ++ G K+ +I G+ Y LK ESGVHR+
Sbjct: 141 DWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLKSESGVHRLV 200
Query: 239 RVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
R+ +A + HTS ++V + P D+ +E+ ++P DI + T RS GAGGQ+VN ++A+
Sbjct: 201 RISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQHVNTTDSAVR 260
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
+ H PTGI + + E++Q QN+ A++ L+++LY+ ++ + +I ++ G
Sbjct: 261 ITHIPTGI-VVTSSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEAK-GDAGWGN 318
Query: 358 KIRTYNYKDNR-VTDHRLKMNFELTS-FLDGNIDNAVQSCAAME 399
+IR+Y + + V D R T LDG +D + + AM+
Sbjct: 319 QIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 102/329 (31%), Positives = 182/329 (55%)
Query: 77 VVSNPS--EYQKLAQSMA-ELDEVVSTYRKFKDCEKQLE---ESRALAKENGNDEEMAEM 130
+V +P+ E Q AQ + E ++ ++ ++FK+ QL+ E LA ++ +E M ++
Sbjct: 38 LVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKELSIQLDDLIEMIELASKDHEEETMKDL 97
Query: 131 IAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQK 190
S D + +LE+++GAGG E+ WA L+RMY +
Sbjct: 98 ERELLLLKEKIQKKEIECLF-----SGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTR 152
Query: 191 YSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRV 249
++E + ++ ++ E E+ G K+ +++ G Y + E+GVHR+ R+ +A +
Sbjct: 153 WAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKR 212
Query: 250 HTSTATVAIMPEAD-EVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIF 308
HTS A + + P + E+ + ID KD+++ T R+ GAGGQ+VNK E+AI + H P+ I +
Sbjct: 213 HTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAIRITHLPSKIVVQ 272
Query: 309 CTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ--VGTG--ARAEKIRTYNY 364
R+Q QNK+ A+Q+L+++LYEI++R+++EK+ R + +G G R+ + Y
Sbjct: 273 SQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARNVEDSIGWGYQIRSYVLHPYQM 332
Query: 365 -KDNRVTDHRLKMNFELTSFLDGNIDNAV 392
KD R T H + +TS LDG++D+ +
Sbjct: 333 IKDLR-TGHEVG---NITSVLDGDLDSFI 357
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 86/241 (35%), Positives = 144/241 (59%)
Query: 160 DARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEI 219
D++ +LE++AGAGG+++ W L MY K+ + + +I +++ E G ++ ++I
Sbjct: 181 DSKGCLLEIQAGAGGNDSMDWTKILFEMYCKWGARKGYNVEIIDTADGEFG-YRHASLKI 239
Query: 220 KGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTT 278
G+ Y L+ E G+HR+ R+ + G+ HTS A+V + P +D+ +++ IDPKD+ T
Sbjct: 240 DGHNAYGWLRTEMGIHRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDPKDLHFET 299
Query: 279 ARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLY--EIKVR 336
RS GAGGQ+VNK E+A+ + H PTGI + + ER+Q QNKS L LL++KLY E+K +
Sbjct: 300 LRSSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKK 359
Query: 337 EQQEKIRTQRLSQVGTGARAEKIRTYN-YKDNRVTDHRLKMN-FELTSFLDGN--IDNAV 392
+ EK L + + A +R Y+ + RV D R + +++ LDG +DN +
Sbjct: 360 IEAEKSFRDELGK-NSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMI 418
Query: 393 Q 393
+
Sbjct: 419 K 419
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 86/238 (36%), Positives = 144/238 (60%)
Query: 160 DARN-IMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISS-SEAEKGGFKTVVM 217
D +N I +E R G GG+EA W+ +L+ Y+ ++E+N K I S++ K +
Sbjct: 61 DNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLR 120
Query: 218 EIKGNR-----VYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIM-PEADEVEVVIDP 271
IK ++ +Y K ESG+H+V+R+P+ +++ R+H+STATVAI + +E + I+
Sbjct: 121 IIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINL 180
Query: 272 KDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLY 331
KD++++T RS GGQNVNK+E+ + + HKPTGI+ C EERTQ NK A++ L K+
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQ 240
Query: 332 EIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNID 389
++ +E++ ++ +R + R+ +IRTYN+ +TDH K +L F G ++
Sbjct: 241 HMESKEKENMVQHERAKLIKESNRSNRIRTYNFFRGYITDHINKKKIDLIYFEKGKLE 298
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 86/238 (36%), Positives = 144/238 (60%)
Query: 160 DARN-IMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISS-SEAEKGGFKTVVM 217
D +N I +E R G GG+EA W+ +L+ Y+ ++E+N K I S++ K +
Sbjct: 61 DNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLR 120
Query: 218 EIKGNR-----VYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIM-PEADEVEVVIDP 271
IK ++ +Y K ESG+H+V+R+P+ +++ R+H+STATVAI + +E + I+
Sbjct: 121 IIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINL 180
Query: 272 KDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLY 331
KD++++T RS GGQNVNK+E+ + + HKPTGI+ C EERTQ NK A++ L K+
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQ 240
Query: 332 EIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNID 389
++ +E++ ++ +R + R+ +IRTYN+ +TDH K +L F G ++
Sbjct: 241 HMESKEKENMVQHERAKLIKESNRSNRIRTYNFFRGYITDHINKKKIDLIYFEKGKLE 298
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 100/365 (27%), Positives = 188/365 (51%)
Query: 32 RNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSM 91
R+V+ +S L +A I LES T + L ++ + P + + + + L
Sbjct: 4 RSVILEDISEIGEDLASIARCLDIVGLES---TLESLDLECSSPSLWDDAEKAKSLLSER 60
Query: 92 AELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXX 151
+ + V++++R + K L E + ++ + + +A + A
Sbjct: 61 SRVSAVLTSFRVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMF- 119
Query: 152 XXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQ-NSWKCTLISSSEAEKG 210
S DA + L +R+GAGG E+ W L+RMY K++E + + + S + E+
Sbjct: 120 ----SHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEET 175
Query: 211 GFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEAD-EVEVVI 269
G K V ++I G Y + ESG+HR+ R+ + + HTS A+V + P D E+++ I
Sbjct: 176 GLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKI 235
Query: 270 DPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAK 329
KD+ + T R+ GAGGQ+VNK E+A+ + H P+G+ + C R+Q QN++ A LL+++
Sbjct: 236 LEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSR 295
Query: 330 LYEIKVREQQEKIRT--QRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFE---LTSFL 384
LYE++++E+++++ Q ++G G +IR+Y R+ L+ E + + +
Sbjct: 296 LYEMELQEKEKRMAQDHQNKCEIGWG---HQIRSYVMHPYRMVKD-LRTGHETGNVDAVM 351
Query: 385 DGNID 389
+G++D
Sbjct: 352 NGDLD 356
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 89/332 (26%), Positives = 175/332 (52%)
Query: 67 DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEE 126
DLS++ + + + S Q++ A + + ++++ + ++ E ++ N DE
Sbjct: 36 DLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFTELEEEYNYYTELLSVIN-NDTDEL 94
Query: 127 MAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVR 186
+ E+ A S+ D + +E+++GAGG E+ W+ L R
Sbjct: 95 LNELEAGLAKLKEKVQKKEVECLF-----SNEADHNDCFIEIQSGAGGTESNDWSSMLFR 149
Query: 187 MYQKYSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEA 245
MY +++E +++K ++ + E+ G K+ +++ G+ Y K ESG+HR+ R+ +
Sbjct: 150 MYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRISPFNS 209
Query: 246 QGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
+ HT+ +++ + P +E + I KD+ + T R+ GAGGQ+VNK E+A+ + H P+G
Sbjct: 210 NAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSG 269
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTY-N 363
I + C R+Q QN + A LL+++LY++K++E+++K+ + + G +IR+Y
Sbjct: 270 IVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGW-GNQIRSYVM 328
Query: 364 YKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQS 394
+ V D R + S LDGN+D+ + S
Sbjct: 329 HPYQMVKDIRTGHEVGNVNSVLDGNLDSFIIS 360
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 98/338 (28%), Positives = 168/338 (49%)
Query: 66 KDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE--ESRALAKENGN 123
K LS +L ++ +P+ K+++ L + F+ + LE + LAKE N
Sbjct: 143 KVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFE--RELLEHIDMLKLAKEE-N 199
Query: 124 DEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRAGAGGDEAGIWAGD 183
D E+ E +DP +EV+AGAGG E+ WA
Sbjct: 200 DSEL-ESETLKALIDMRRVSKEKELEALLSADNDPCSC---YIEVQAGAGGTESNDWAAM 255
Query: 184 LVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQT 243
++ MY+ ++++ + T++ + E G K +++ G Y K E GVHR+ R+
Sbjct: 256 VMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPF 315
Query: 244 EAQGRVHTSTATVAIMPEADE--VEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHK 301
++ R HTS A VA++P + V I+ D+ + RSGGAGGQ+ N ++A+ + H
Sbjct: 316 DSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHI 375
Query: 302 PTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQ--QEKIRTQRLSQVGTGARAEKI 359
PTGI C ER+Q NK+ A+ +L+++L ++++ Q TQ L+++ G +I
Sbjct: 376 PTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWG---NQI 432
Query: 360 RTYNYKDNRVTDHRLKMNFELT---SFLDGNIDNAVQS 394
RTY R+ L+ N+E++ S L+G++D + S
Sbjct: 433 RTYVLHPYRMVKD-LRTNYEVSDPDSVLEGDLDGFILS 469
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 65/125 (52%), Positives = 90/125 (72%)
Query: 209 KGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV 268
+GG + I G+ Y +K+E GVHRVQRVP+TE QGRVHTST TVAI+P+ E+ +V
Sbjct: 38 QGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLV 97
Query: 269 IDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRA 328
I+PKD+ + T R+ GAGGQ+VN ++A+ + H PTG+ C +ER+QL+NK A+ LRA
Sbjct: 98 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 157
Query: 329 KLYEI 333
KLY +
Sbjct: 158 KLYSM 162
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 92/348 (26%), Positives = 171/348 (49%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
+ +E + L + +DP + + + Q++ +EL R+ ++ ++L++
Sbjct: 22 VLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVT---SELSHTQGELRRVEELRRRLDDL 78
Query: 115 RAL----AKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSDPLDARNIMLEVRA 170
L A+E G A+ +A S D R ++ +R+
Sbjct: 79 PVLYELAAEEAG--AAAADAVAEADAELKSLRADIEATEVRTLL-SGEYDEREALVTIRS 135
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGG +A WA L+RMY +++EQ+ + + +S AE+ G K+ + Y L
Sbjct: 136 GAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSV 195
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPK-DIELTTARSGGAGGQNV 289
E G HR+ R+ + Q R TS A V ++P + + + P+ D+ + RS G GGQ+V
Sbjct: 196 EQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSV 255
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N ++A+ L H P+GI + C E++QLQNK A+++L+AKL E K E++ ++ L
Sbjct: 256 NTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEERAEL--DALKA 313
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFEL---TSFLDGNIDNAVQS 394
G + ++R+Y ++ L+ +E+ + LDG++D +++
Sbjct: 314 DGGSSWGNQMRSYVLHPYQMVKD-LRTEYEVGNPAAVLDGDLDGFLEA 360
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 48/127 (37%), Positives = 69/127 (54%)
Query: 266 EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQL 325
+ VI+ D+ + T RSGG GGQNVNKVETA+ + HKPT I + + ERTQL NK AL+
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKR 277
Query: 326 LRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYN-YKDNRVTDHRLKM-NFELTSF 383
+ KL ++ + K L+ E+IR Y Y + + D R + + ++
Sbjct: 278 IYEKLLYLQTEALKNK--KYELANKSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDIDKV 335
Query: 384 L-DGNID 389
L G ID
Sbjct: 336 LYQGEID 342
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 48/127 (37%), Positives = 69/127 (54%)
Query: 266 EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQL 325
+ VI+ D+ + T RSGG GGQNVNKVETA+ + HKPT I + + ERTQL NK AL+
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKR 277
Query: 326 LRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYN-YKDNRVTDHRLKM-NFELTSF 383
+ KL ++ + K L+ E+IR Y Y + + D R + + ++
Sbjct: 278 IYEKLLYLQTEALKNK--KYELANKSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDIDKV 335
Query: 384 L-DGNID 389
L G ID
Sbjct: 336 LYQGEID 342
>TAIR|locus:2082563 [details] [associations]
symbol:PrfB3 "peptide chain release factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA;ISS] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0043488 "regulation of mRNA
stability" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009772 "photosynthetic electron transport in
photosystem II" evidence=IMP] [GO:0010190 "cytochrome b6f complex
assembly" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=IMP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0009570 EMBL:CP002686
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0009658 GO:GO:0048255
GO:GO:0003730 GO:GO:0009772 GO:GO:0016149 GO:GO:0010190
IPI:IPI00516531 RefSeq:NP_191278.2 UniGene:At.34857
ProteinModelPortal:F4J264 SMR:F4J264 EnsemblPlants:AT3G57190.1
GeneID:824886 KEGG:ath:AT3G57190 OMA:DIIPLFL Uniprot:F4J264
Length = 406
Score = 188 (71.2 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 79/360 (21%), Positives = 158/360 (43%)
Query: 38 SLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEV 97
SL + ++ AE + LE + W + ++ +P++ ++ +A+ +
Sbjct: 49 SLKKKIKDVVLKAEMFAPDALELEEEQWIKQEETMRYFDLWDDPAKSDEILLKLADRAKA 108
Query: 98 VSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIAXXXXXXXXXXXXXXXXXXXXXXPSD 157
V + KD + + EE++ + + G + + + D
Sbjct: 109 VDS---LKDLKYKAEEAKLII-QLGEMDAIDYSLFEQAYDSSLDVSRSLHHYEMSKLLRD 164
Query: 158 PLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSE---QNSW---KCTLISSSEAEKGG 211
DA + +++G+ G ++ IW +V MY K++E QN+ KC+L+S+ K G
Sbjct: 165 QYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSN----KSG 220
Query: 212 FKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDP 271
+ +E + Y L E GVHR+ + T + +ATV I+P +
Sbjct: 221 VSSATIEFEFEFAYGYLLGERGVHRLI-ISSTSNE----ECSATVDIIPLFLRASPDFEV 275
Query: 272 KDIELTTARSGGAGGQNVNKV-ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKL 330
K+ +L + + +K+ E + + H P+G+ + + ER + N+ +AL L+AKL
Sbjct: 276 KEGDLIVSYPA----KEDHKIAENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKL 331
Query: 331 YEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNR-VTDHRLKMNF-ELTSFLDGNI 388
+ + ++Q+ ++ E+ R+Y K ++ V D + + +L S LDGNI
Sbjct: 332 --LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNI 389
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 155 (59.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 35/106 (33%), Positives = 59/106 (55%)
Query: 266 EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQL 325
E+ + D+E T RS GAGGQ+VNK T + + H+PTGI + C ++R+Q N+ A +
Sbjct: 22 ELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFLARRE 81
Query: 326 LRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY---KDNR 368
+ ++ + E +R ++L + AR ++ T Y KDN+
Sbjct: 82 ILERIERLNKGESPRDVRVEKLRK--QKARRKRRATTKYDPEKDNQ 125
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 155 (59.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 35/106 (33%), Positives = 59/106 (55%)
Query: 266 EVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQL 325
E+ + D+E T RS GAGGQ+VNK T + + H+PTGI + C ++R+Q N+ A +
Sbjct: 22 ELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFLARRE 81
Query: 326 LRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY---KDNR 368
+ ++ + E +R ++L + AR ++ T Y KDN+
Sbjct: 82 ILERIERLNKGESPRDVRVEKLRK--QKARRKRRATTKYDPEKDNQ 125
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 133 (51.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 33/93 (35%), Positives = 56/93 (60%)
Query: 267 VVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLL 326
V I DI++ R+ G GGQ+ N ++A+ + H PTGI + +E R+Q QN+ +A++ L
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62
Query: 327 RAKLYEIKVREQQEKIRTQRLSQVGTGARAEKI 359
R L E + R+ +++I T V GAR +++
Sbjct: 63 RIAL-EKRERKAKKRIATT----VPRGAREKRL 90
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 133 (51.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 33/93 (35%), Positives = 56/93 (60%)
Query: 267 VVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLL 326
V I DI++ R+ G GGQ+ N ++A+ + H PTGI + +E R+Q QN+ +A++ L
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62
Query: 327 RAKLYEIKVREQQEKIRTQRLSQVGTGARAEKI 359
R L E + R+ +++I T V GAR +++
Sbjct: 63 RIAL-EKRERKAKKRIATT----VPRGAREKRL 90
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 123 (48.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 268 VIDPKDIELTTARSG-GAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLL 326
+I +DIE G G GGQ +NK + + L H PTG+ + C R+Q QN++ A + L
Sbjct: 34 LIKEEDIEEKFLHGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKL 93
Query: 327 RAKLYEI-KVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELT 381
KL + + + +R +V + K + N K +V D ++ EL+
Sbjct: 94 ALKLDDFYNPGTSRNAVLMERAQKV----KQSKSKKSNRKYKKVEDENIQKQMELS 145
>FB|FBgn0050100 [details] [associations]
symbol:CG30100 species:7227 "Drosophila melanogaster"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720 EMBL:AE013599
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 EMBL:BT030757 RefSeq:NP_725560.1
UniGene:Dm.38081 SMR:A1ZAD7 STRING:A1ZAD7
EnsemblMetazoa:FBtr0087140 GeneID:246457 KEGG:dme:Dmel_CG30100
UCSC:CG30100-RA FlyBase:FBgn0050100 eggNOG:NOG295143
InParanoid:A1ZAD7 OMA:CHTHRLA OrthoDB:EOG4JH9Z9 NextBio:842552
Uniprot:A1ZAD7
Length = 146
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 268 VIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLR 327
V+ DIE T R G GGQ VNK + L H PT I + C R +N+ A +LL
Sbjct: 29 VLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLLL 88
Query: 328 AKLYEIKVREQ-----QEKIRTQRLSQVGTGARAEKIRTY--NYKDNRVTD 371
KL ++ + + Q K + QR S R EK++ +++D TD
Sbjct: 89 EKL-DVHLNGEHSIAAQVKAQEQRKS-TERRRRQEKLQEMKKSWQDRERTD 137
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 122 (48.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 272 KDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLY 331
K L T R G GGQ+ NK ++A+ L H PTGI E+R+Q +N++ AL LR L
Sbjct: 96 KQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRT-LL 154
Query: 332 EIKVREQ 338
IKVR +
Sbjct: 155 AIKVRNK 161
>SGD|S000004271 [details] [associations]
symbol:YLR281C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0006415 "translational
termination" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 SGD:S000004271
GO:GO:0005739 Gene3D:3.30.160.20 EMBL:BK006945 EMBL:U17243
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812
GeneTree:ENSGT00390000012759 EMBL:AY557931 PIR:S50367
RefSeq:NP_013383.1 ProteinModelPortal:Q05863 SMR:Q05863
DIP:DIP-2590N STRING:Q05863 EnsemblFungi:YLR281C GeneID:850987
KEGG:sce:YLR281C CYGD:YLR281c OMA:KHERARA OrthoDB:EOG4WHCWF
NextBio:967507 Genevestigator:Q05863 GermOnline:YLR281C
Uniprot:Q05863
Length = 155
Score = 107 (42.7 bits), Expect = 0.00023, P = 0.00023
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 283 GAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRA-LQLLRAKLYEIKVREQQEK 341
G GGQ +NK + + L H+PTGI + C E R++ QN+ A L+L R +E+
Sbjct: 47 GPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLARLKLARELAASYDTMPSREE 106
Query: 342 IRTQRLSQVGTGARAEKIRTYNYKD 366
Q Q R + Y ++
Sbjct: 107 ALLQWHRQQKRSQRRRSVAKYEQRE 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 394 0.00095 117 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 607 (65 KB)
Total size of DFA: 230 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.71u 0.18s 35.89t Elapsed: 00:00:02
Total cpu time: 35.73u 0.18s 35.91t Elapsed: 00:00:02
Start: Mon May 20 23:46:54 2013 End: Mon May 20 23:46:56 2013