BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014874
(416 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225436757|ref|XP_002269884.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/418 (80%), Positives = 368/418 (88%), Gaps = 9/418 (2%)
Query: 1 MNSLTMLSTARIYTPLNHSPQR--QRFGGSQSKRNVVFPSLSFRTPKLICMAEPYLITKL 58
MNSLT AR P R Q F + PS + RTP+++CMAEPYLITKL
Sbjct: 1 MNSLTTSFAARF-------PARAEQVFCNRVRSFALFRPSRTHRTPRIVCMAEPYLITKL 53
Query: 59 ESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALA 118
ESA KTWK+LSVKLADP++VSNPSEYQKLAQSMAELDEVVST+++FKDCEKQLEE++ALA
Sbjct: 54 ESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKALA 113
Query: 119 KENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAG 178
KE+G D +MAEMIA EI +L+N+L ELEE +KVLLLPSDPLD+RNI+LEVRAG GGDEAG
Sbjct: 114 KEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEAG 173
Query: 179 IWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQ 238
IWAGDLVRMYQKYSE+NSWK +SSSEAEKGGFKT V+E+KGN VYSKLKYESGVHRVQ
Sbjct: 174 IWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRVQ 233
Query: 239 RVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL 298
RVPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA+DL
Sbjct: 234 RVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDL 293
Query: 299 FHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEK 358
FHKPTGIRIFCTEERTQLQN+SRALQLLRAKLYEIKVREQQE IR QR SQVGTGARAEK
Sbjct: 294 FHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQELIRNQRKSQVGTGARAEK 353
Query: 359 IRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
IRTYNYKDNRVTDHRLKMNFELTSFLDG+I+ AVQSC AMEQKELLEELA SV P+G
Sbjct: 354 IRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAVQSCVAMEQKELLEELAHSVATPAG 411
>gi|356505530|ref|XP_003521543.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
Length = 429
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/418 (78%), Positives = 368/418 (88%), Gaps = 5/418 (1%)
Query: 1 MNSLTMLSTARIYTPLNHS--PQRQRFGGSQSKRNVVFPSLSFRTPKLICMAEPYLITKL 58
MNSLT TARI P R R + R V + P+++CMAEPYLITKL
Sbjct: 15 MNSLTASFTARICATRRDLLLPIRHRSLHPFTTRRV---ATKLTPPRIVCMAEPYLITKL 71
Query: 59 ESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALA 118
ESA KTWK+LSVKLADP+VVS+P EYQKLAQS++ELDEVVSTYR+FKDCEK LEE++ALA
Sbjct: 72 ESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVSELDEVVSTYRRFKDCEKVLEETKALA 131
Query: 119 KENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAG 178
K++GNDE+M EMI+ EI +LS +L ELEEK+KVLLLPSDP+DARNI+LEVRAG GGDEAG
Sbjct: 132 KDDGNDEDMVEMISFEIDTLSKQLAELEEKIKVLLLPSDPMDARNILLEVRAGTGGDEAG 191
Query: 179 IWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQ 238
IWAGDLVRMY++YSE+NSWK +L+SSS AEKGG+KT VMEIKGNRVYSKLKYESGVHRVQ
Sbjct: 192 IWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQ 251
Query: 239 RVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL 298
RVP TE QGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL
Sbjct: 252 RVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL 311
Query: 299 FHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEK 358
FHKPTGIRIFCTEERTQL+N++RA QLLRAKLYEIKVREQQE +R QR QVGTGAR+EK
Sbjct: 312 FHKPTGIRIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGTGARSEK 371
Query: 359 IRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
IRTYNYKDNRVTDHRLK+N+ELTSFLDG+I++AVQSC MEQKELLEELAESVGAP+G
Sbjct: 372 IRTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAPAG 429
>gi|449498433|ref|XP_004160536.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
Length = 416
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/373 (86%), Positives = 348/373 (93%)
Query: 41 FRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVST 100
FR LICMAEPYLI KLESA KTWK+LSVKLADP++VSNP+EYQKLAQSM+ELDEVVST
Sbjct: 41 FRASTLICMAEPYLIVKLESAEKTWKELSVKLADPDIVSNPTEYQKLAQSMSELDEVVST 100
Query: 101 YRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLD 160
+RKFK+CEKQLEE++AL+KE+GNDE+M EMIA EI SLS+EL ++EEKLKV+LLPSDPLD
Sbjct: 101 FRKFKECEKQLEEAKALSKESGNDEDMVEMIALEISSLSSELKDIEEKLKVMLLPSDPLD 160
Query: 161 ARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIK 220
ARNIMLEVRAG GGDEAGIWAGDLVRMYQKYSE+NSWK + +SSSEAEKGG+KT V+EIK
Sbjct: 161 ARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYVLEIK 220
Query: 221 GNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTAR 280
G RVYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELTTAR
Sbjct: 221 GQRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTAR 280
Query: 281 SGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQE 340
SGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNK RA QLLRAKLYEIKVREQQE
Sbjct: 281 SGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVREQQE 340
Query: 341 KIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQ 400
KIR QR QVGTGARAEKIRTYNYKDNRVTDHRLK NFELTSFL+G+I++AVQ+C MEQ
Sbjct: 341 KIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACVTMEQ 400
Query: 401 KELLEELAESVGA 413
KELLEELA+S A
Sbjct: 401 KELLEELAQSAVA 413
>gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa]
gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/417 (79%), Positives = 373/417 (89%), Gaps = 5/417 (1%)
Query: 2 NSLTMLS-TARIYTPLNHSPQRQRFGGSQSKRNVVFPSLS-FRTPKLICMAEPYLITKLE 59
NSL S TAR+ + P F + S+ + P+LS TP+++CMAEPYLITKLE
Sbjct: 3 NSLATTSLTARMSPTI---PHPHHFRQTPSRIFFLRPTLSRSTTPRIVCMAEPYLITKLE 59
Query: 60 SAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAK 119
SA KTWK+LSVKL DP+VVSNPSEYQKLAQS+AELDEVVS +++FKDCEK LE++RALAK
Sbjct: 60 SAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRALAK 119
Query: 120 ENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGI 179
E+GNDE+MAEMIA EI+SLS+EL +LEEKL VLLLPSDPLDARNI+LEVRAG GGDEAG+
Sbjct: 120 EDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEAGL 179
Query: 180 WAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQR 239
WAGDLVRMYQ+YSEQNSWK ++ISSSEAEKGG+KT VME+KG VYSKLKYESGVHRVQR
Sbjct: 180 WAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRVQR 239
Query: 240 VPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLF 299
VPQTEAQGRVHTSTATVAIMPE DEVEVVIDPK+ ELTTARSGGAGGQNVNKVETA+DL
Sbjct: 240 VPQTEAQGRVHTSTATVAIMPEVDEVEVVIDPKEYELTTARSGGAGGQNVNKVETAVDLI 299
Query: 300 HKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKI 359
HKPTGIRIFCTEERTQLQN++RALQLLRAKLYEIKVREQQE IR QR QVGTGARAEKI
Sbjct: 300 HKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQESIRNQRKMQVGTGARAEKI 359
Query: 360 RTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
RTYNYKDNRVTDHRLK+NFELTSFL G+I+NAVQ+C+A+EQKELLEELAESVGAP+G
Sbjct: 360 RTYNYKDNRVTDHRLKVNFELTSFLAGDIENAVQACSALEQKELLEELAESVGAPAG 416
>gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
lyrata]
gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/416 (76%), Positives = 361/416 (86%), Gaps = 6/416 (1%)
Query: 2 NSLTMLSTARIYTPLNHSPQRQRFGGSQSKRNVVF----PSLSFRTPKLICMAEPYLITK 57
+S+T TAR + L+ SP R Q V PS S RT +L+CMAEPYLI K
Sbjct: 3 SSMTTSPTARAFLHLHSSPFTLR--SRQPPAGVCLVSWPPSPSRRTRRLVCMAEPYLIRK 60
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
+ES KTWK+LSVKLADP VVSN SEYQKLAQSM+ELDEVV+ +R+FKDCEKQL ES+ L
Sbjct: 61 MESVEKTWKELSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVL 120
Query: 118 AKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEA 177
AKE G+DE+MAEMI SEI SLS E+ LE++LKVLLLPSDPLDARNI+LEVRAG GGDEA
Sbjct: 121 AKEAGDDEDMAEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRAGTGGDEA 180
Query: 178 GIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRV 237
IW GDLVRMYQ+YSE++SWK +++S SEAE GG+KT VMEIKGNRVYSKLKYESGVHRV
Sbjct: 181 AIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRV 240
Query: 238 QRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
QRVPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELT+ARSGGAGGQNVNKVETAID
Sbjct: 241 QRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAID 300
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
LFHKP+GIRIFCTEERTQ++NK+RA QLLRAKLYEIKVREQQEKIR +R SQVGTGAR+E
Sbjct: 301 LFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSE 360
Query: 358 KIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
KIRTYNYKD+RVTDHRLKMNF LTSFLDG +++AVQ+CAA+EQKEL+EEL+ESV A
Sbjct: 361 KIRTYNYKDSRVTDHRLKMNFALTSFLDGALEDAVQACAALEQKELMEELSESVAA 416
>gi|356570949|ref|XP_003553645.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
Length = 428
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/417 (78%), Positives = 369/417 (88%), Gaps = 4/417 (0%)
Query: 1 MNSLTMLSTARIY-TPLNHSPQRQRFGGSQSKRNVVFPSLSFRTPKLICMAEPYLITKLE 59
MNSLT TARI T + R R + R V + P+++CMAEPYLITKLE
Sbjct: 15 MNSLTASFTARICATRRDLLHIRHRSFHPLTTRRV---ATKLTPPRIVCMAEPYLITKLE 71
Query: 60 SAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAK 119
SA KTW++LSVKLADP+VVS+P EYQKLAQS+AELDEVVSTYR+FKDCEK LEE++ALAK
Sbjct: 72 SAEKTWQELSVKLADPDVVSDPKEYQKLAQSVAELDEVVSTYRRFKDCEKVLEETKALAK 131
Query: 120 ENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGI 179
++GNDE+M EMI+ EI SLS +L ELEEKLKVLLLPSDP+DA+NI+LEVRAG GGDEAGI
Sbjct: 132 DDGNDEDMVEMISFEIDSLSKQLAELEEKLKVLLLPSDPMDAKNILLEVRAGTGGDEAGI 191
Query: 180 WAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQR 239
WAGDLVRMY++YSE+NSWK +L+SSS AEKGG+KT VMEIKGNRVYSKLKYESGVHRVQR
Sbjct: 192 WAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQR 251
Query: 240 VPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLF 299
VP TE QGRVHTSTATVAIMPEADEVEV+IDPKDIELTTARSGGAGGQNVNKVETAIDLF
Sbjct: 252 VPLTETQGRVHTSTATVAIMPEADEVEVIIDPKDIELTTARSGGAGGQNVNKVETAIDLF 311
Query: 300 HKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKI 359
HKPTGIRIFCTEERTQL+NK+RA QLLRAKLYE+K+REQQE +R QR QVGTGAR+EKI
Sbjct: 312 HKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEMKIREQQESLRNQRKLQVGTGARSEKI 371
Query: 360 RTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
RTYNYKDNRVTDHRLK+N+ELTSFLDG+I++AVQSC MEQKELLEELAESVGAP+G
Sbjct: 372 RTYNYKDNRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAPAG 428
>gi|22331914|ref|NP_191850.2| Peptide chain release factor 1 [Arabidopsis thaliana]
gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana]
gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana]
Length = 422
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/417 (76%), Positives = 366/417 (87%), Gaps = 2/417 (0%)
Query: 2 NSLTMLSTARIYTPLNHSPQRQRFGGSQSKRNVV--FPSLSFRTPKLICMAEPYLITKLE 59
+S+T TAR + L+ SP R S S +V PS S RT +L+CMAEPYLI K+E
Sbjct: 3 SSMTTSPTARAFLHLHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKME 62
Query: 60 SAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAK 119
S KTWK+LSVKLADP+VVSN SEYQKLAQSM+ELDEVV+ +R+FKDCEKQL ES+ LAK
Sbjct: 63 SVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAK 122
Query: 120 ENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGI 179
E G+DE+MAEMI SEI SL+ E+ ELE++LKVLLLPSDPLDARNI+LEVRAG GGDEA I
Sbjct: 123 EAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAI 182
Query: 180 WAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQR 239
W GDLVRMYQ+YSE++SWK +++S SEAE GG+KT VMEIKGNRVYSKLKYESGVHRVQR
Sbjct: 183 WTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQR 242
Query: 240 VPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLF 299
VPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELT+ARSGGAGGQNVNKVETAIDLF
Sbjct: 243 VPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLF 302
Query: 300 HKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKI 359
HKP+GIRIFCTEERTQ++NK+RA QLLRAKLYEIKVREQQEKIR +R SQVGTGAR+EKI
Sbjct: 303 HKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSEKI 362
Query: 360 RTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
RTYNYKD+RVTDHRLKMNF LT+FLDG +++AVQ+CAA+EQKEL+EEL+ESV A S
Sbjct: 363 RTYNYKDSRVTDHRLKMNFALTTFLDGALEDAVQACAALEQKELMEELSESVAASSA 419
>gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis]
Length = 370
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/370 (86%), Positives = 345/370 (93%)
Query: 47 ICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKD 106
+ + EPYLITKLESA KTWK+LSVKLADP+VVSNP+EYQKLAQS+AELD+VVS YR+FKD
Sbjct: 1 MAVREPYLITKLESAEKTWKELSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKD 60
Query: 107 CEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIML 166
CEKQLEE++ALAKE G DE+MAEMIA EI SLS EL LEEKLKVLLLPSDPLDARNIML
Sbjct: 61 CEKQLEETKALAKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIML 120
Query: 167 EVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYS 226
EVRAG GGDEAG+WAGDLVRMY+KY EQNSWK ++S SEAEKGG+KT VME+KGNRVYS
Sbjct: 121 EVRAGTGGDEAGLWAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYS 180
Query: 227 KLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGG 286
KLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGG
Sbjct: 181 KLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGG 240
Query: 287 QNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQR 346
QNVNKVETA+DLFHKPTGIRIFCTEERTQLQNK+RALQLLRAKLYE+KVREQQE IR QR
Sbjct: 241 QNVNKVETAVDLFHKPTGIRIFCTEERTQLQNKTRALQLLRAKLYEMKVREQQESIRNQR 300
Query: 347 LSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEE 406
QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFL G+I+NAVQ+CA+ EQKELLEE
Sbjct: 301 KLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLQGDIENAVQACASTEQKELLEE 360
Query: 407 LAESVGAPSG 416
LAESVGAP+
Sbjct: 361 LAESVGAPAA 370
>gi|357155899|ref|XP_003577275.1| PREDICTED: peptide chain release factor 1-like [Brachypodium
distachyon]
Length = 411
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 307/403 (76%), Positives = 350/403 (86%), Gaps = 14/403 (3%)
Query: 8 STARIYTPLNHSPQRQRFGGSQSKRNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKD 67
STAR P SP F GS+ +R PS S ++CMAEP+LI+KLES K WK+
Sbjct: 18 STARSPPP---SP---FFLGSKRRRK---PSSS-----VVCMAEPHLISKLESTEKAWKE 63
Query: 68 LSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEM 127
+S +L DP++VS+PSEYQKLAQS+A+L EVVS YR+FK+CE+Q+EE++AL KENG+D +M
Sbjct: 64 MSARLGDPDIVSDPSEYQKLAQSVADLGEVVSAYRQFKECERQIEETKALQKENGDDPDM 123
Query: 128 AEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRM 187
AEMIASE++SLSN+L ELEEKL VLLLPSDPL++RNI+LEVRAG GGDEAGIWAGDLVRM
Sbjct: 124 AEMIASELESLSNQLAELEEKLTVLLLPSDPLNSRNILLEVRAGTGGDEAGIWAGDLVRM 183
Query: 188 YQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQG 247
YQKY E N+WK +S SEAEKGG+KT VME+KG +VYSKLK+ESGVHRVQRVPQTE G
Sbjct: 184 YQKYCELNNWKFKPVSCSEAEKGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTETMG 243
Query: 248 RVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRI 307
RVHTSTATVAIMPEADEV+VVIDPKDIEL TARSGGAGGQNVNKVETAIDL HKPTGIRI
Sbjct: 244 RVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAIDLIHKPTGIRI 303
Query: 308 FCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDN 367
FCTEER+QLQNK RA QLLRAKLYEIK+REQQE IRTQRL QVGTGAR+EKIRTYNYKDN
Sbjct: 304 FCTEERSQLQNKERAFQLLRAKLYEIKLREQQESIRTQRLLQVGTGARSEKIRTYNYKDN 363
Query: 368 RVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
RVTDHRLKMNF L+SFL G+I++AVQSCAAMEQKELLEE+A S
Sbjct: 364 RVTDHRLKMNFVLSSFLIGDIESAVQSCAAMEQKELLEEMATS 406
>gi|357511181|ref|XP_003625879.1| Peptide chain release factor [Medicago truncatula]
gi|355500894|gb|AES82097.1| Peptide chain release factor [Medicago truncatula]
Length = 421
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 323/422 (76%), Positives = 360/422 (85%), Gaps = 9/422 (2%)
Query: 1 MNSLTMLSTARIY-TPLNHSPQRQRFGGSQSKRNV-VFPSLSFRTPKLICMAEPYLITKL 58
MNSLT TARIY T + R R + R V + P+L+ + + +CMAEPYL+ KL
Sbjct: 1 MNSLTASFTARIYGTRCDVVLLRNRSVHQFNNRRVTLLPTLT--STRFVCMAEPYLLLKL 58
Query: 59 ESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALA 118
ESA KTWKDLSVKLADP++VSNPSEYQKLAQS++ELD VVS Y+KFKDCEK LEE++ALA
Sbjct: 59 ESAEKTWKDLSVKLADPDIVSNPSEYQKLAQSVSELDVVVSLYQKFKDCEKTLEETQALA 118
Query: 119 KENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAG 178
K+ GND++M EMI+ EI+SLS +L ELEEKLKVLLLPSDPLD RNIMLEVRAG GGDEAG
Sbjct: 119 KDAGNDQDMTEMISYEIESLSKQLSELEEKLKVLLLPSDPLDERNIMLEVRAGTGGDEAG 178
Query: 179 IWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQ 238
IWAGDLVRMY+K+SE NSWK + IS SEAEKGG+KT VMEIKGNRVYSKLK+ESGVHRVQ
Sbjct: 179 IWAGDLVRMYEKFSELNSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKFESGVHRVQ 238
Query: 239 RVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDL 298
RVP TE QGRVHTSTATVAIMPE DEVEVVIDPKDIE+TTARSGGAGGQNVNKVETAIDL
Sbjct: 239 RVPLTETQGRVHTSTATVAIMPEVDEVEVVIDPKDIEVTTARSGGAGGQNVNKVETAIDL 298
Query: 299 FHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEK 358
HKPTGIRIFCTE+RTQ+QNK+ A +LLRAKLYEIKVREQQE IR QR SQVGTGAR+EK
Sbjct: 299 VHKPTGIRIFCTEQRTQIQNKNLAFKLLRAKLYEIKVREQQESIRNQRKSQVGTGARSEK 358
Query: 359 IRTYNYK-----DNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
IRTYNYK DNRVTDHRLK NF LTSFL GNI+ AVQSC AMEQKEL+EEL ES+GA
Sbjct: 359 IRTYNYKVLNVADNRVTDHRLKQNFSLTSFLGGNIEEAVQSCVAMEQKELMEELVESMGA 418
Query: 414 PS 415
+
Sbjct: 419 TA 420
>gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris]
Length = 498
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 314/420 (74%), Positives = 345/420 (82%), Gaps = 36/420 (8%)
Query: 1 MNSLTMLSTARIY-TPLNHSPQRQR--FGGSQSKRNVVFPSLSFRTPKLICMAEPYLITK 57
MNSLT TARI T + P R+R FG +K P+++CMAEPYLITK
Sbjct: 50 MNSLTASFTARICNTRRDLLPMRRRSSFGRVATK---------LAHPRIVCMAEPYLITK 100
Query: 58 LESAAKTWKDLSV------------------------KLADPEVVSNPSEYQKLAQSMAE 93
LESA KTWK+LSV KLADP+VVS+P EYQKLAQS+AE
Sbjct: 101 LESAEKTWKELSVCMPLRAVMLPFSVMIFVSKMKFQVKLADPDVVSDPKEYQKLAQSVAE 160
Query: 94 LDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLL 153
LDEVVS YRKFKDCEK LEE++ALAK+ GNDE+M EMI+ EI LS +L ELE+ LKVLL
Sbjct: 161 LDEVVSIYRKFKDCEKHLEEAKALAKDGGNDEDMVEMISFEIDLLSKQLAELEDNLKVLL 220
Query: 154 LPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFK 213
LPSDPLDARNIM+EVRAG GGDEAGIWAGDLVRMY++YSE+NSWK +L+SSS AEKGGFK
Sbjct: 221 LPSDPLDARNIMIEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGFK 280
Query: 214 TVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKD 273
T VMEIKGNRVYSKLKYESGVHRVQRVP TEAQGRVHTSTATVAIMPE DEVEVVIDPKD
Sbjct: 281 TYVMEIKGNRVYSKLKYESGVHRVQRVPLTEAQGRVHTSTATVAIMPEVDEVEVVIDPKD 340
Query: 274 IELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEI 333
IELTTARSGGAGGQNVNKVETAIDL HKPTGIRIFCTEERTQL+NK+RA QLLRAKLYEI
Sbjct: 341 IELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEI 400
Query: 334 KVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQ 393
K+REQQE +R QR SQVGTGARAEKIRTYNYKDNRVTDHRLK N+ELTSFLDG+I++AVQ
Sbjct: 401 KLREQQESLRNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKTNYELTSFLDGDIEDAVQ 460
>gi|413920293|gb|AFW60225.1| hypothetical protein ZEAMMB73_878070 [Zea mays]
Length = 412
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 289/368 (78%), Positives = 336/368 (91%)
Query: 46 LICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFK 105
++CMAEPYLI KL+SA K WK++SV+LADP++VS+PSEYQK+AQS++ELD+VV+TYR+FK
Sbjct: 42 VVCMAEPYLIAKLDSAEKAWKEMSVRLADPDIVSDPSEYQKIAQSVSELDQVVTTYRQFK 101
Query: 106 DCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
DCE+QLE ++AL KEN D +M EMIASE+++LSN+L ELEEK+K LLLPSDPLD+RNI+
Sbjct: 102 DCERQLEATKALEKENEGDPDMLEMIASELEALSNQLAELEEKMKFLLLPSDPLDSRNIL 161
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LEVRAGAGGDEAGIWAGDLVRMYQ+Y E+N+WK +S SEAE GG+KT VME+KG +VY
Sbjct: 162 LEVRAGAGGDEAGIWAGDLVRMYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVY 221
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
SKLK+ESGVHRVQRVP TEA GRVHTSTATVAIMPEADEV+VVIDPKDIEL TARSGGAG
Sbjct: 222 SKLKFESGVHRVQRVPLTEAMGRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAG 281
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA QLLRAKLYEIK+REQQE +R Q
Sbjct: 282 GQNVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESLRNQ 341
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R QVGTGAR+EKIRTYNYKDNRVTDHRLKMNFELTSFL G+I++A+QSCA MEQ+ELLE
Sbjct: 342 RKLQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTSFLLGDIESAIQSCATMEQQELLE 401
Query: 406 ELAESVGA 413
E+A SVGA
Sbjct: 402 EMASSVGA 409
>gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group]
gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group]
gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group]
gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group]
Length = 416
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 300/368 (81%), Positives = 340/368 (92%)
Query: 46 LICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFK 105
++CMAEPYLI KL+SA K WK++SV+LADP++VS+PSEYQKLAQS+AELD+VVSTYR+FK
Sbjct: 46 VVCMAEPYLIAKLDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFK 105
Query: 106 DCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
DCEKQ+EE++ L KEN +D +MAEMI SE++SLSN+L ELEEKLK+LLLP+DPLDARNI+
Sbjct: 106 DCEKQIEETKVLQKENEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNIL 165
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LEVRAGAGGDEAGIWAGDLVRMYQKY E+NSWK +SSSEAEKGGFKT VME+KG +VY
Sbjct: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVY 225
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
SKLK+ESGVHRVQRVPQTE GRVHTSTATVAIMPEADEV+VVIDPKDIEL TARSGGAG
Sbjct: 226 SKLKFESGVHRVQRVPQTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAG 285
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA QLLRAKLYEIK+REQQE IR Q
Sbjct: 286 GQNVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESIRNQ 345
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R QVGTGAR+EKIRTYNYKDNRVTDHRLKMNFELT FL G+I++AVQSC++MEQKELLE
Sbjct: 346 RKLQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELTGFLMGDIESAVQSCSSMEQKELLE 405
Query: 406 ELAESVGA 413
E+A SVGA
Sbjct: 406 EMATSVGA 413
>gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 411
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 283/365 (77%), Positives = 331/365 (90%)
Query: 46 LICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFK 105
++CMAEP+LI+KL+S K WK++S++L DP++VS+P EYQKLAQS++ L EVV+ Y +FK
Sbjct: 42 VVCMAEPHLISKLDSTEKAWKEMSIRLGDPDIVSDPGEYQKLAQSVSNLGEVVTAYGEFK 101
Query: 106 DCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
+CE+Q+EE++AL KENG+D +MAEMIASE++SLS++L ELEE+L VLLLPSDPL++RNI+
Sbjct: 102 ECERQIEETKALQKENGDDPDMAEMIASELESLSDQLAELEERLTVLLLPSDPLNSRNIL 161
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LEVRAG GGDEAGIWAGDLVRMYQ+Y E N+WK +S SEAEKGGFKT VME+KG +VY
Sbjct: 162 LEVRAGTGGDEAGIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVY 221
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
SKLK+ESGVHRVQRVPQTE GRVHTSTATVAIMPEADEV+VVIDPKDIEL ARSGGAG
Sbjct: 222 SKLKFESGVHRVQRVPQTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKAARSGGAG 281
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETAIDL HKPTGIRIFCTEER+QLQNK RA QLLRAKLYEIK+REQQE IRTQ
Sbjct: 282 GQNVNKVETAIDLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQESIRTQ 341
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
RL QVGTGAR+EKIRTYNYKDNRVTDHRLKMNF L+SFL G+I++A+QSCAA+EQKELLE
Sbjct: 342 RLLQVGTGARSEKIRTYNYKDNRVTDHRLKMNFILSSFLLGDIESAIQSCAALEQKELLE 401
Query: 406 ELAES 410
E+A S
Sbjct: 402 EMATS 406
>gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis
thaliana]
Length = 419
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 307/417 (73%), Positives = 350/417 (83%), Gaps = 5/417 (1%)
Query: 2 NSLTMLSTARIYTPLNHSPQRQRFGGSQSKRNVV--FPSLSFRTPKLICMAEPYLITKLE 59
+S+T TAR + L+ SP R S S +V PS S RT +L+CMAEPYLI K+E
Sbjct: 3 SSMTTSPTARAFLHLHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKME 62
Query: 60 SAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAK 119
S KTWK+LSVKLADP+VVSN SEYQKLAQSM+ELDEVV+ +R+FKDCEKQL ES+ LAK
Sbjct: 63 SVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAK 122
Query: 120 ENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGI 179
E G+DE+MAEMI SEI SL+ E+ ELE++LKVLLLPSDPLDARNI+LEVRAG GGDEA I
Sbjct: 123 EAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAI 182
Query: 180 WAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQR 239
W GDLV SE + + + +G +KT VMEIKGNRVYSKLKYESGVHRVQR
Sbjct: 183 WTGDLVGA--DVSEVQRAQLLEVFNGFMLRG-YKTCVMEIKGNRVYSKLKYESGVHRVQR 239
Query: 240 VPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLF 299
VPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIELT+ARSGGAGGQNVNKVETAIDLF
Sbjct: 240 VPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLF 299
Query: 300 HKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKI 359
HKP+GIRIFCTEERTQ++NK+RA QLLRAKLYEIKVREQQEKIR +R SQVGTGAR+EKI
Sbjct: 300 HKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSEKI 359
Query: 360 RTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
RTYNYKD+RVTDHRLKMNF LT+FLDG +++AVQ+CAA+EQKEL+EEL+ESV A S
Sbjct: 360 RTYNYKDSRVTDHRLKMNFALTTFLDGALEDAVQACAALEQKELMEELSESVAASSA 416
>gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
Length = 412
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/368 (78%), Positives = 337/368 (91%)
Query: 46 LICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFK 105
++CMAEPYLI KL+SA K WK++SV+LADP++VS+PSEYQKLAQS++ELD+VV+TYR+FK
Sbjct: 42 VVCMAEPYLIAKLDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFK 101
Query: 106 DCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
DCE+QLEE++AL KEN +D +M+EMI SE+++LSN+L ELEEKLK+LLLPSDPLD+RNI+
Sbjct: 102 DCERQLEETKALEKENEDDPDMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNIL 161
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LEVRAGAGGDEAGIWAGDLVRMYQKY E+N+WK +S SEA+ GG+KT VME+KG +VY
Sbjct: 162 LEVRAGAGGDEAGIWAGDLVRMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVY 221
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
SKLK+ESGVHRVQRVP TE GRVHTSTATVAIMPEADEV+VVIDPKDIEL TARSGGAG
Sbjct: 222 SKLKFESGVHRVQRVPLTETMGRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAG 281
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DL HKPTGIRIFCTEER+QLQNK RA QLLRAKLYEIK+REQQE IR Q
Sbjct: 282 GQNVNKVETAVDLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQESIRNQ 341
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R QVGTGAR+EKIRTYNYKDNRVTDHRLKMN+ELT FL G+I++AVQSCA +EQ+ELLE
Sbjct: 342 RKMQVGTGARSEKIRTYNYKDNRVTDHRLKMNYELTGFLLGDIESAVQSCATLEQQELLE 401
Query: 406 ELAESVGA 413
E+A SVGA
Sbjct: 402 EMASSVGA 409
>gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
Length = 412
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 280/403 (69%), Positives = 342/403 (84%), Gaps = 8/403 (1%)
Query: 14 TPLNHS----PQRQRFGGSQSKRNVVFPSLSFRTPKLICMA-EPYLITKLESAAKTWKDL 68
+P +HS P+ FG S +V P F+ ++CMA EPY+I+KL+SA +T+K+L
Sbjct: 12 SPRHHSNATRPREMGFGWS-GDWSVAMPRKRFQA-TIVCMATEPYIISKLDSAEQTYKEL 69
Query: 69 SVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMA 128
+VKLADP+V ++PSE+QKLA+++A+++EVV++Y+K+K+ +++L++ + + K +G D+E+A
Sbjct: 70 TVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEMIKSSG-DKELA 128
Query: 129 EMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMY 188
EM E L + LEE LKVLLLPSDPLD+RNIMLEVRAG GGDEAGIWAGDLVRMY
Sbjct: 129 EMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAGIWAGDLVRMY 188
Query: 189 QKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGR 248
QKY+EQN W + IS +EAEKGGFK V+EI G+RVYSKLKYESGVHRVQRVP TE+QGR
Sbjct: 189 QKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQRVPATESQGR 248
Query: 249 VHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIF 308
VHTSTATVAIMPE DEVEVVIDPKDIELTTARSGGAGGQNVNKVETA+DLFHKPTGIRIF
Sbjct: 249 VHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIF 308
Query: 309 CTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNR 368
CTEERTQL+NK+RA QLLRAKLYE+K+ EQQEKI +QR SQVGTGAR+EKIRTYNYKDNR
Sbjct: 309 CTEERTQLKNKARAFQLLRAKLYEMKLAEQQEKISSQRRSQVGTGARSEKIRTYNYKDNR 368
Query: 369 VTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
V+DHR K+NF+L SFL GNI++AVQ+CAAMEQK++LEELA SV
Sbjct: 369 VSDHRTKINFDLDSFLSGNIESAVQACAAMEQKQMLEELAASV 411
>gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
Length = 412
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/403 (68%), Positives = 341/403 (84%), Gaps = 8/403 (1%)
Query: 14 TPLNHS----PQRQRFGGSQSKRNVVFPSLSFRTPKLICMA-EPYLITKLESAAKTWKDL 68
+P +H P+ FG S +V P F+ ++CMA EPY+I+KL+SA +T+K+L
Sbjct: 12 SPRHHGNATRPREMGFGWS-GDWSVAMPRKRFQA-TIVCMATEPYIISKLDSAEQTYKEL 69
Query: 69 SVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMA 128
+VKLADP+V ++PSE+QKLA+++A+++EVV++Y+K+K+ +++L++ + + K +G D+E+A
Sbjct: 70 TVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEMIKSSG-DKELA 128
Query: 129 EMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMY 188
EM E L + LEE LKVLLLPSDPLD+RNIMLEVRAG GGDEAGIWAGDLVRMY
Sbjct: 129 EMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAGIWAGDLVRMY 188
Query: 189 QKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGR 248
QKY+EQN W + IS +EAEKGGFK V+EI G+RVYSKLKYESGVHRVQRVP TE+QGR
Sbjct: 189 QKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQRVPATESQGR 248
Query: 249 VHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIF 308
VHTSTATVAIMPE DEVEVVIDPKDIELTTARSGGAGGQNVNKVETA+DLFHKPTGIRIF
Sbjct: 249 VHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIF 308
Query: 309 CTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNR 368
CTEERTQL+NK+RA QLLRAKLYE+K+ EQQEKI +QR SQVGTGAR+EKIRTYNYKDNR
Sbjct: 309 CTEERTQLKNKARAFQLLRAKLYEMKLAEQQEKISSQRRSQVGTGARSEKIRTYNYKDNR 368
Query: 369 VTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
V+DHR K+NF+L SFL GNI++AVQ+CAA+EQK++LEELA SV
Sbjct: 369 VSDHRTKINFDLDSFLSGNIESAVQACAAVEQKQMLEELAASV 411
>gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 376
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/361 (74%), Positives = 321/361 (88%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
EPYLI KL+SA +T+K+LS++LADP+V +N +EYQK+A+S+AEL+E+ TY++FK+CE Q
Sbjct: 11 EPYLIAKLDSAERTYKELSMRLADPDVANNNNEYQKIAKSLAELEEIYQTYQRFKECEAQ 70
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
L++++ +AK+ D EMAEM A E L+ ++ ELEE+LKV+LLPSDPLD+RNIMLEVRA
Sbjct: 71 LDDAKEMAKDAAGDREMAEMAAEEANILAQQVEELEEQLKVMLLPSDPLDSRNIMLEVRA 130
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEAGIWAGDLVRMYQK+SE+N+W+C+ +S +EAEKGG+K V+EI G RVYSKLKY
Sbjct: 131 GTGGDEAGIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYKEFVLEITGERVYSKLKY 190
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP TE+QGRVHTSTATVAIMPE DEVEVVIDPKDIELTTARSGGAGGQNVN
Sbjct: 191 ESGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVEVVIDPKDIELTTARSGGAGGQNVN 250
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
KVETAIDLFHKPTGIRIFCTEER+QL+NK RA QLLRAKLYEIK+REQQE IR R SQV
Sbjct: 251 KVETAIDLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYEIKLREQQETIRNARQSQV 310
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
GTGAR+EKIRTYNYKDNRV+DHR K+NF+LT+ L+G ++ VQSCAA+EQKE+LEELA S
Sbjct: 311 GTGARSEKIRTYNYKDNRVSDHRTKINFDLTTVLNGELEGPVQSCAALEQKEMLEELAAS 370
Query: 411 V 411
+
Sbjct: 371 M 371
>gi|449436804|ref|XP_004136182.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
Length = 392
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/377 (71%), Positives = 298/377 (79%), Gaps = 32/377 (8%)
Query: 41 FRTPKLICMAEPYLITKLESAAKTWKDLSVK-LADPEVVSNPSEYQKLAQSMAELDEVVS 99
FR LICMAEPYLI KLESA KTWK+LS++ + + PS++Q A + + + V
Sbjct: 41 FRASTLICMAEPYLIVKLESAEKTWKELSLQDWNNRRQFTPPSDFQADAMNDYFISQAV- 99
Query: 100 TYRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLK---VLLLPS 156
+E +RA ++I L+ L ++K V+LLPS
Sbjct: 100 -----------IENTRA----------------NDIHKRVPFLVPLTSRVKIFTVMLLPS 132
Query: 157 DPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVV 216
DPLDARNIMLEVRAG GGDEAGIWAGDLVRMYQKYSE+NSWK + +SSSEAEKGG+KT V
Sbjct: 133 DPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYQKYSERNSWKFSPVSSSEAEKGGYKTYV 192
Query: 217 MEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIEL 276
+EIKG RVYSKLKYESGVHRVQRVPQTE QGRVHTSTATVAIMPEADEVEVVIDPKDIEL
Sbjct: 193 LEIKGQRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIEL 252
Query: 277 TTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVR 336
T ARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNK RA QLLRAKLYEIKVR
Sbjct: 253 TIARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKLRAFQLLRAKLYEIKVR 312
Query: 337 EQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCA 396
EQQEKIR QR QVGTGARAEKIRTYNYKDNRVTDHRLK NFELTSFL+G+I++AVQ+C
Sbjct: 313 EQQEKIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKTNFELTSFLEGDIEDAVQACV 372
Query: 397 AMEQKELLEELAESVGA 413
MEQKELLEELA+S A
Sbjct: 373 TMEQKELLEELAQSAVA 389
>gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
gi|32171539|sp|Q8DMG9.1|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
Length = 364
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/360 (65%), Positives = 295/360 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL + +T+ +L+ +LADP+V NP+E+QK+A+S A L+E V+ Y +++
Sbjct: 1 MAEAYLLEKLRTVEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLN 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+QL ++R L KE N+ E+ +M EI LS+ + +LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 QQLVDARQLHKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAGIWAGDLVRMY +Y++ W+ TL+S S AE GGFK ++EIKG+RVYSKL
Sbjct: 121 RAGAGGDEAGIWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TEA GR+HTSTATVA+MPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KYESGVHRVQRVPATEASGRIHTSTATVAVMPEVDEVEVEIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL+HKPTGIRIFCTEER+QL+NK RA Q+LRAKLYEIK+REQQE I + R S
Sbjct: 241 VNKVETAVDLYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQEAITSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKD+RVTDHRL NF L+S L+G+++ +Q+C + +Q+E L +LA
Sbjct: 301 QVGTGDRSEKIRTYNYKDDRVTDHRLGQNFSLSSVLEGDLEPIIQACISRDQQEQLAQLA 360
>gi|428224264|ref|YP_007108361.1| peptide chain release factor 1 (bRF-1) [Geitlerinema sp. PCC 7407]
gi|427984165|gb|AFY65309.1| bacterial peptide chain release factor 1 (bRF-1) [Geitlerinema sp.
PCC 7407]
Length = 368
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/367 (63%), Positives = 293/367 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YLI KL S T+ +L+ +LADP++ +P EYQ++A++ + L+E V+ Y ++K +
Sbjct: 1 MAESYLIEKLNSVETTFHELTRRLADPDIARDPDEYQRVAKARSSLEETVTAYEEWKQTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE +D EM E+ E++ L ELE++LK+LLLP DP D +NIMLE+
Sbjct: 61 EELVGARQVLKEASSDPEMREIAQEEVRQLDARFEELEQRLKILLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W+ L+S S A+ GGFK ++EIKG+RVYSKL
Sbjct: 121 RAGTGGDEACIWAGDLVRMYSRYAEGQGWQVKLVSESLADMGGFKEAILEIKGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTAT AIMPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPVTEAGGRVHTSTATAAIMPEVDEVEVAIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL N+ LTS L+G++D +Q+C + +Q+E L ELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNYTLTSVLEGDVDLIIQACISADQQEQLAELA 360
Query: 409 ESVGAPS 415
E+ A S
Sbjct: 361 ENNSAMS 367
>gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
Length = 368
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/362 (63%), Positives = 294/362 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YLI KL S +T+ +L+++LADP+V +NP+E Q++A+ + ++EVV+TY+ +K +
Sbjct: 1 MAETYLIEKLRSFEQTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE G D EM EM A E++ L N+L +LE LKVLLLPSDP D +NIMLE+
Sbjct: 61 EELTGARQVQKEAGEDPEMKEMAALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W+ ++S S A+ GGFK ++EIKG++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE DEV+V IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEAGGRVHTSTATVAVMPEVDEVDVEIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L+ L+G +D+ V +C +Q+E L ELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFSLSPVLEGGMDDVVDACVFTDQQERLLELA 360
Query: 409 ES 410
+
Sbjct: 361 NA 362
>gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101]
gi|119361636|sp|Q110D7.1|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium
erythraeum IMS101]
Length = 369
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 296/366 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+++LADP+V +PSE+QKLA++ + L+EVV+ Y ++K+ +
Sbjct: 1 MAETYLLDKLKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +++ + KE D EM EM E++ L +L LE ++K+ LLP DP D +NIMLE+
Sbjct: 61 EELADAKEILKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +YSE SWK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV ID KDIEL+TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVEIDQKDIELSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCT+ER+QLQN+ RA+Q+LRAKLYEIK++EQQ ++ + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQEQQAEVSSIRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+I+N +Q+C +Q+E L+ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLNQNFSLVPLLEGDIENVIQACITQDQQERLQELA 360
Query: 409 ESVGAP 414
S P
Sbjct: 361 ASSSTP 366
>gi|425440602|ref|ZP_18820900.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9717]
gi|389718891|emb|CCH97186.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9717]
Length = 366
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP+V NP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLDKLQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E +WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+E LEELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGDIEEVIQSCIAKDQQEKLEELA 360
>gi|411119487|ref|ZP_11391867.1| bacterial peptide chain release factor 1 (bRF-1) [Oscillatoriales
cyanobacterium JSC-12]
gi|410711350|gb|EKQ68857.1| bacterial peptide chain release factor 1 (bRF-1) [Oscillatoriales
cyanobacterium JSC-12]
Length = 371
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/369 (62%), Positives = 296/369 (80%), Gaps = 2/369 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+ +L+ +LADP+V +P+E+QKLA+ + L+EVV+T+ +K +
Sbjct: 1 MAEAYLLDKLNSVEQTFDELTRRLADPDVAKDPAEFQKLAKVRSSLEEVVATFETWKQAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+QL +R + KE G D E+ EM E++ L ++L ELE +LK+LLLPSDP D +NIMLE+
Sbjct: 61 EQLAGARQILKEAGGDLELQEMAMLEVEDLESKLEELETRLKILLLPSDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IW GDL+R+Y +Y+E W+ L+S S A+ GGFK ++EI+G+RVYSKL
Sbjct: 121 RAGAGGDEASIWVGDLLRLYSRYAETQGWRIKLVSESPADMGGFKEAILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEAQGRVHTSTATVA+MPE DEV+V IDPKDIE+TT RSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDEVDVHIDPKDIEMTTMRSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRI C EER+QLQN+ RA+Q+LRAKLYE+K++EQQ +R+ RL
Sbjct: 241 VNKVETAVDLLHKPTGIRIKCMEERSQLQNRERAMQILRAKLYEMKLQEQQAAVRSARLM 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L L+G+I+ +Q+C A +Q+E LE+LA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLNQNFSLAPVLEGDIEELIQTCIARDQQERLEQLA 360
Query: 409 --ESVGAPS 415
ES G PS
Sbjct: 361 AEESNGQPS 369
>gi|428213136|ref|YP_007086280.1| peptide chain release factor 1 (bRF-1) [Oscillatoria acuminata PCC
6304]
gi|428001517|gb|AFY82360.1| bacterial peptide chain release factor 1 (bRF-1) [Oscillatoria
acuminata PCC 6304]
Length = 367
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/366 (62%), Positives = 293/366 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ ++ADP++ +P+E+QK+A++ + L+EVV+TY +K+ E
Sbjct: 1 MAETYLLDKLKSVEQTFHELTRRMADPDIARDPNEFQKVARARSSLEEVVNTYENWKNTE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L +R + KE +D E+ +M A E+ L +L +LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 AELIGARQVLKEASSDAELQQMAALEVAELDEQLTQLESRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W+ ++S S A+ GGFK ++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAETQGWRVKMLSESTADMGGFKEAILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE GRVHTSTATVAIMPE DEVEV ID KDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEGGGRVHTSTATVAIMPEVDEVEVQIDAKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLY++K+ EQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDLKLAEQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L S L+G+I+ +QSC + +Q+E LEELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFTLMSTLEGDIEEVIQSCISQDQQERLEELA 360
Query: 409 ESVGAP 414
S P
Sbjct: 361 ASTTMP 366
>gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
gi|425464772|ref|ZP_18844082.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9809]
gi|189039979|sp|B0JYC5.1|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
gi|389833132|emb|CCI22624.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9809]
Length = 366
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP+V NP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLDKLQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E +WK +L+S S+A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGDIEEVIQSCIAKDQQEKLAELA 360
>gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
Length = 364
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ +P EYQK+A+S + L+EVV+ Y +K+ +
Sbjct: 1 MAESYLLEKLKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVTAYETWKNSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ D E+ EM E+K L +++ LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 EELVGARQILKESNGDPELHEMATIEVKDLESKIEHLEEQLKILLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ WK L+S S E GGFK V++EI+GN VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEIQGNSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDDVEVHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R TDHRL NF L+ L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRATDHRLGQNFTLSPVLEGDLEILIQSCISQDQQERLAELA 360
>gi|425443667|ref|ZP_18823738.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9443]
gi|425454869|ref|ZP_18834594.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9807]
gi|389731102|emb|CCI04800.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9443]
gi|389804338|emb|CCI16752.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9807]
Length = 366
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+V SNP E Q+LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLNKLQSVEQTYTELTRRLADPDVTSNPGELQRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E +WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I++ +QSC A +Q+ L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGDIEDVIQSCIAKDQQGKLAELA 360
>gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
gi|254790876|sp|B8HXV0.1|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
Length = 364
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 287/360 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S T+ +L+ +LADPEV ++P E+Q++A++ A L+E V TY +K +
Sbjct: 1 MAESYLLDKLKSVELTFHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L E+R +A+E +D E+ EM E+ L+ + LE++LK+LLLP DP D +NIMLE+
Sbjct: 61 QHLAEARQIAREAASDPELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y +Y+E W+ L+S S E GGFK ++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATEASGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K++EQQ +I ++R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLQEQQSEITSRRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L L+G+I+ +Q+C +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNFPLNQVLEGDIEGIIQACITQDQQEQLAELA 360
>gi|443656709|ref|ZP_21131760.1| peptide chain release factor 1 [Microcystis aeruginosa DIANCHI905]
gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333334|gb|ELS47898.1| peptide chain release factor 1 [Microcystis aeruginosa DIANCHI905]
Length = 366
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+V SNP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLNKLQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E +WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY+IK++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I++ +QSC A +Q+ LEELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNENFSLDRILDGDIEDVIQSCIAKDQQGKLEELA 360
>gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
gi|416398033|ref|ZP_11686793.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 0003]
gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
gi|357262612|gb|EHJ11726.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 0003]
Length = 370
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 226/362 (62%), Positives = 293/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A+ + L+E V+TY+ +++ +
Sbjct: 1 MAESYLLEKLQSVEQTYQELTRRLADPDIATNPDELQRVAKLRSSLEETVNTYQTWQETQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L+ ++ + KE G+D EM EM + E+ L + +LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 EELKGAKQILKEAGSDPEMREMASMEVSELEENIEQLEERLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEITGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEIEIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+IDN ++SC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLSQNFALVGALEGDIDNIIESCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
CS-505]
gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
CS-505]
Length = 364
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 290/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ +P EYQK+A+S + L+EVV Y +K+ +
Sbjct: 1 MAELYLLEKLKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVIAYETWKNSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ D E+ EM E+K L N++ LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 EELVGARQILKESNGDPELHEMATMEVKDLENKIEHLEEQLKILLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ W+ L+S S E GGFK V++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDDVEVHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R TDHRL NF L+ L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRATDHRLGQNFTLSPVLEGDLETLIQSCISQDQQERLAELA 360
>gi|425437290|ref|ZP_18817713.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9432]
gi|425451244|ref|ZP_18831066.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 7941]
gi|425459978|ref|ZP_18839464.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9808]
gi|389677789|emb|CCH93326.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9432]
gi|389767625|emb|CCI07083.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 7941]
gi|389827462|emb|CCI21257.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9808]
Length = 366
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/360 (63%), Positives = 289/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+V SNP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLNKLQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQKWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY+IK++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+ LEELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNENFSLDRILDGDIEEVIQSCIAKDQQGKLEELA 360
>gi|440683436|ref|YP_007158231.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
cylindrica PCC 7122]
gi|428680555|gb|AFZ59321.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
cylindrica PCC 7122]
Length = 364
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/362 (63%), Positives = 288/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ NP EYQK+A+S + L+EVV+TY +K +
Sbjct: 1 MAESYLLEKLKSVEQTFHELTRRLGDPDTTKNPDEYQKIAKSRSSLEEVVNTYETWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE ND E+ EM A E+ L +L LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EDLTGARQVLKEANNDPELQEMAALEVSELVEKLEYLESRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ SWK L+S S E GGFK V++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQSWKVKLVSESLGEMGGFKEVILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTAT+AIMPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATIAIMPEVDDVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE + + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+RVTDHRL NF L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRVTDHRLGQNFTLNPVLEGDLETVIQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|427718726|ref|YP_007066720.1| peptide chain release factor 1 (bRF-1) [Calothrix sp. PCC 7507]
gi|427351162|gb|AFY33886.1| bacterial peptide chain release factor 1 (bRF-1) [Calothrix sp. PCC
7507]
Length = 366
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/362 (63%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ SNP EYQK+A+S + L+EVV+TY +K +
Sbjct: 1 MAETYLLEKLKSVEQTFNELTRRLGDPDTASNPDEYQKIAKSRSSLEEVVNTYDTWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE +D E+ EM A E+ L +L LE++LKVLLLPSDP D +NIMLE+
Sbjct: 61 EELSGARQVLKEANSDPELQEMAALEVDELVQKLNYLEDRLKVLLLPSDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IW GDL+RMY +Y++ W+ +S+SE E GGFK V++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWVGDLLRMYSRYADVQGWRVKSVSASEGEMGGFKEVILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL N+ L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNYSLNPVLEGDLETLIQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|376007798|ref|ZP_09784983.1| peptide chain release factor RF-1 [Arthrospira sp. PCC 8005]
gi|423062904|ref|ZP_17051694.1| peptide chain release factor 1 [Arthrospira platensis C1]
gi|375323774|emb|CCE20736.1| peptide chain release factor RF-1 [Arthrospira sp. PCC 8005]
gi|406715483|gb|EKD10637.1| peptide chain release factor 1 [Arthrospira platensis C1]
Length = 371
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/370 (61%), Positives = 298/370 (80%), Gaps = 3/370 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+++LADPE+ ++P E+Q++A++ + L++VV+ Y+ +K +
Sbjct: 1 MAETYLLDKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQDWKTTQ 60
Query: 109 KQLEESRALAKENGND---EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
+L ++ + +E GND +EM EM A E++ L+ +L ELE +LK+LLLP DP D +NIM
Sbjct: 61 TELAGAKQILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIM 120
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LE+RAG GGDEA IWAGDLVRMY +Y+E W+ L+S S A+ GGFK ++EI+G+RVY
Sbjct: 121 LEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGDRVY 180
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
S+LK+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIE+TTARSGGAG
Sbjct: 181 SQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDPKDIEMTTARSGGAG 240
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DLFHKPTGIR+FCTEER+QL+N+ RA+Q+LRAKLYE K+REQQ+ + +
Sbjct: 241 GQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKLREQQDAVTSM 300
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R SQVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G I + +Q+C +Q+E L
Sbjct: 301 RRSQVGTGSRSEKIRTYNYKDNRVTDHRLGHNFSLAPVLEGGIGDLIQACIIQDQQERLA 360
Query: 406 ELAESVGAPS 415
+LAES S
Sbjct: 361 QLAESTAPAS 370
>gi|422301703|ref|ZP_16389068.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9806]
gi|389789215|emb|CCI14723.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9806]
Length = 366
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 289/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP+V SNP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLDKLQSVEQTYKELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQKWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+ L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGDIEEVIQSCIAKDQQGKLAELA 360
>gi|428203682|ref|YP_007082271.1| peptide chain release factor 1 [Pleurocapsa sp. PCC 7327]
gi|427981114|gb|AFY78714.1| peptide chain release factor 1 [Pleurocapsa sp. PCC 7327]
Length = 371
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/362 (64%), Positives = 298/362 (82%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP++ +NP E Q+++++ + L+E V+TY +K +
Sbjct: 1 MAESYLLEKLQSVEQTFKELTRRLADPDIATNPEELQRVSKARSSLEETVNTYETWKKTK 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE+G+D E+ EM A E++ L +L +LE++LK+LLLP DP D +NIMLE+
Sbjct: 61 EDLAGARQILKESGSDPELREMAALEVEELEEKLAQLEKQLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +WK L+S S AE GGFK ++EI+G+RVYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQNWKVKLVSESLAELGGFKEAILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVEIDPKDIEIKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L + L+GN+++ +Q+C A +Q+E LEELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFNLAAALEGNLEDMIQACIAQDQQERLEELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Coleofasciculus chthonoplastes PCC
7420]
gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Coleofasciculus chthonoplastes PCC
7420]
Length = 371
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/362 (62%), Positives = 295/362 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP++ ++P E Q++A++ + L+EVV TY +K +
Sbjct: 1 MAETYLLDKLQSVEQTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE D EM EM + E++ L +L ELE++LK+LLLP DP D +NIMLE+
Sbjct: 61 EELTGARQILKEANGDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W+ L+S S A+ GGFK ++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ +DPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIEVDPKDLEVSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RALQ+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERALQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL N+ L S L+G+I++ +Q+C +Q+E LEELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLSQNYSLNSLLEGDIESVIQACITQDQQERLEELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301]
gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942]
gi|81561678|sp|Q5N0T6.1|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361627|sp|Q31L36.1|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC
6301]
gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus
elongatus PCC 7942]
Length = 368
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/361 (61%), Positives = 291/361 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAEPYLI KL+S +T++DL+ +LADPE+ ++P E+Q++A+ + ++E+V+TY ++K +
Sbjct: 1 MAEPYLIEKLQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRD 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L+ +R + +E+ D E+ EM A E+ L L+ LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 AELKGAREILRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA +WAGDL+RMY +Y+E W+ L+S S E GG+K ++EI+G VYSKL
Sbjct: 121 RAGTGGDEASLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEVSIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL +NF L L+G I+ +Q+C + +Q E L ++A
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGLNFSLNPVLEGEIEEVIQACISKDQTEQLAQMA 360
Query: 409 E 409
+
Sbjct: 361 Q 361
>gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
Length = 371
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/370 (61%), Positives = 297/370 (80%), Gaps = 3/370 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+++LADPE+ ++P E+Q++A++ + L++VV+ Y+ +K +
Sbjct: 1 MAETYLLDKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQDWKTTQ 60
Query: 109 KQLEESRALAKENGND---EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
+L ++ + +E GND +EM EM A E++ L+ +L ELE +LK+LLLP DP D +NIM
Sbjct: 61 TELAGAKQILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIM 120
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LE+RAG GGDEA IWAGDLVRMY +Y+E W+ L+S S A+ GGFK ++EI+G RVY
Sbjct: 121 LEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGARVY 180
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
S+LK+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIE+TTARSGGAG
Sbjct: 181 SQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDPKDIEMTTARSGGAG 240
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DLFHKPTGIR+FCTEER+QL+N+ RA+Q+LRAKLYE K+REQQ+ + +
Sbjct: 241 GQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKLREQQDAVTSM 300
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R SQVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G I + +Q+C +Q+E L
Sbjct: 301 RRSQVGTGSRSEKIRTYNYKDNRVTDHRLGHNFSLAPVLEGGIGDLIQACIIQDQQERLA 360
Query: 406 ELAESVGAPS 415
+LAES S
Sbjct: 361 QLAESTAPAS 370
>gi|428314365|ref|YP_007125342.1| peptide chain release factor 1 (bRF-1) [Microcoleus sp. PCC 7113]
gi|428255977|gb|AFZ21936.1| bacterial peptide chain release factor 1 (bRF-1) [Microcoleus sp.
PCC 7113]
Length = 370
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/365 (61%), Positives = 297/365 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP++ ++P+E Q++ ++ + L+EVV+TY +K +
Sbjct: 1 MAETYLLEKLQSVEQTFHELTRRLADPDIATDPTEMQRVTKARSSLEEVVNTYDTWKTTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R++ KE+ +D E+ +M A E++ L +L ELE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELAGARSVLKESSSDPELHQMAALEVEELETKLNELEVRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W+ L+S S A+ GGFK ++EI+G++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQKWRVKLLSESLADMGGFKEAILEIQGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE DEVEV IDPKDIE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDEVEVQIDPKDIEMKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYEIK++EQQ+ +R+ RL
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEIKLQEQQQAVRSMRLL 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL N+ L L+G+++ +QSC + +Q+E LEELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNYSLNPVLEGDLETMIQSCISQDQQERLEELA 360
Query: 409 ESVGA 413
S +
Sbjct: 361 ASTSS 365
>gi|354565823|ref|ZP_08984997.1| Peptide chain release factor 1 [Fischerella sp. JSC-11]
gi|353548696|gb|EHC18141.1| Peptide chain release factor 1 [Fischerella sp. JSC-11]
Length = 366
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 291/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+ +L+ +LADP+ NP EYQK+A++ + L+EVV+TY +K +
Sbjct: 1 MAEQYLLEKLRSVEQTFNELTRRLADPDTAKNPDEYQKVAKARSGLEEVVNTYETWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ D E+ EM A E++ L ++ LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EELIGARQILKESQGDAELQEMAALEVQELEEKIEYLENRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA IWAGDLVRMY +Y++ W+ L+S S AE GGFK ++EI+G+ VYSKL
Sbjct: 121 RAGTGGEEASIWAGDLVRMYSRYADTQGWRVKLVSESLAEMGGFKEAILEIQGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VEV IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDDVEVHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L+ L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLSPVLEGDLEQLIQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
Length = 370
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S T+++L+ +LADP++ +NP E Q++A++ + L+E V+TY ++ +
Sbjct: 1 MAEAYLLEKLKSVELTYRELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTK 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ D E+ EM A E++ L +L LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELAGARQILKESAGDLELREMAALEVQELEQQLETLESRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQRWAVKLVSESLADMGGFKEAILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+ID +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLVGALEGDIDEIIQSCISRDQQEQLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803]
gi|383324027|ref|YP_005384881.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383327196|ref|YP_005388050.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383493080|ref|YP_005410757.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384438348|ref|YP_005653073.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|451816437|ref|YP_007452889.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|2500139|sp|P74707.1|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|339275381|dbj|BAK51868.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|359273347|dbj|BAL30866.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359276517|dbj|BAL34035.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359279687|dbj|BAL37204.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407960059|dbj|BAM53299.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803]
gi|451782406|gb|AGF53375.1| peptide chain release factor [Synechocystis sp. PCC 6803]
Length = 365
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/362 (62%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+++L+ LADP++ +NP E Q++A++ + L+E V TY +K +
Sbjct: 1 MAETYLLDKLASVEQTYQELTRMLADPDIATNPDELQRVAKARSSLEETVDTYETWKRSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+ +R + KE+GND EM EM E++ L N + ELE++L +LLLP DP D +NIMLE+
Sbjct: 61 EDLKGARQIVKESGNDPEMREMAQLEVEELENAIGELEKRLTILLLPKDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E WK +L+S S A+ GGFK ++E+KG+RVYS+L
Sbjct: 121 RAGTGGDEASIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEVKGDRVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVKIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLY++ ++EQ + I + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQNDAISSNRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF+L + L+G I ++SC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGRNFDLNTALEGEIHTIIESCISQDQQERLAELA 360
Query: 409 ES 410
E+
Sbjct: 361 EA 362
>gi|443316500|ref|ZP_21045942.1| peptide chain release factor 1 [Leptolyngbya sp. PCC 6406]
gi|442783933|gb|ELR93831.1| peptide chain release factor 1 [Leptolyngbya sp. PCC 6406]
Length = 366
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/365 (62%), Positives = 292/365 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+ +L+ +LADP+V +P+E+Q +A+ + L+E V+TY ++K +
Sbjct: 1 MAESYLLDKLNSVNQTFHELTRRLADPDVAQDPNEFQHIAKLRSSLEETVTTYDEWKQVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + +E+ +D ++ EM A E+ L + ELE KLKVLLLP DP D +NIMLE+
Sbjct: 61 EELVGAREIYRESASDPDLREMAAQEVADLEQQEAELERKLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL+RMY +Y+E W+ L+S S A+ GGFK ++EI+G+RVYSKL
Sbjct: 121 RAGAGGDEASIWAGDLMRMYSRYAEGQGWRVKLVSESLADAGGFKETILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VE+ ID KDIE+TTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEIHIDAKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIR+FCTEER+QL+N+ RA+Q+LRAKLY++K+REQQE I + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYDLKLREQQEAITSDRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L+ L+G I+ VQSC + +Q++ LE LA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFTLSPVLEGGIEEMVQSCISQDQQDRLESLA 360
Query: 409 ESVGA 413
S A
Sbjct: 361 TSTTA 365
>gi|427707960|ref|YP_007050337.1| peptide chain release factor 1 (bRF-1) [Nostoc sp. PCC 7107]
gi|427360465|gb|AFY43187.1| bacterial peptide chain release factor 1 (bRF-1) [Nostoc sp. PCC
7107]
Length = 366
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 291/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ NP EYQ++A++ + L+EVV+TY +K +
Sbjct: 1 MAESYLLEKLKSVEQTFNELTRRLADPDTAKNPDEYQQIAKARSSLEEVVNTYETWKLAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE +D+EM EM A E+ L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EDLIGARQVYKEAASDQEMQEMAALEVSELEEKIEYLEARLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ WK +L+S S E GG+K V++EIKG+ VYS+L
Sbjct: 121 RAGTGGDEASIWAGDLMRMYTRYAQTQGWKVSLVSESLGEMGGWKEVILEIKGDNVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTAT+AIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATIAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLNPVLEGDLETVIQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|390438242|ref|ZP_10226727.1| Peptide chain release factor 1 [Microcystis sp. T1-4]
gi|389838341|emb|CCI30851.1| Peptide chain release factor 1 [Microcystis sp. T1-4]
Length = 366
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/360 (63%), Positives = 289/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP+V SNP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLNKLQSVEQTYKELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ E+ A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREIAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQKWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+ L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLERILDGDIEEVIQSCIARDQQGKLAELA 360
>gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413]
gi|119361508|sp|Q3MF91.1|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
variabilis ATCC 29413]
Length = 366
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/365 (62%), Positives = 291/365 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ NP EYQK+A+S + L+EVV+TY +K +
Sbjct: 1 MAESYLLEKLKSVEQTFNELTRRLADPDTARNPDEYQKIAKSRSSLEEVVNTYETWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ +D E+ E+ A E+ L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELIGARQVLKESNSDPELQEIAALEVNELEEKIKYLETRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ W+ L+S S E GGFK V++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R TDHRL NF L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRATDHRLGQNFSLNPVLEGDLETVIQSCISQDQQERLAELA 360
Query: 409 ESVGA 413
S A
Sbjct: 361 TSSAA 365
>gi|428305841|ref|YP_007142666.1| peptide chain release factor 1 (bRF-1) [Crinalium epipsammum PCC
9333]
gi|428247376|gb|AFZ13156.1| bacterial peptide chain release factor 1 (bRF-1) [Crinalium
epipsammum PCC 9333]
Length = 369
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/362 (63%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP++ ++P+E Q++A++ A L+EVV+TY +K +
Sbjct: 1 MAEAYLLEKLKSVEQTFHELTRRLGDPDIATSPNEMQRVAKARASLEEVVNTYEIWKKTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
L +R + KE +D EM EM A E++ L + ELE++L +LLLP DP D +NIMLE+
Sbjct: 61 DDLVGARQVLKEAASDREMHEMAALEVEELEANVQELEKRLTILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +WK L+S S AE GGFK V+EI+G++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAENQNWKVKLVSESLAEMGGFKEAVLEIQGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE++ + R +
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEEVTSLRRT 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L + L+G+ID +Q+C + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNFSLNTVLEGDIDLIIQACISEDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120]
gi|20139331|sp|Q8YPK9.1|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120]
Length = 366
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 288/365 (78%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ NP EYQK+A+S + L+EVV TY +K +
Sbjct: 1 MAESYLLEKLKSVEQTFNELTRRLGDPDTAKNPDEYQKIAKSRSSLEEVVETYDNWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE +D +M EM A E+K L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELIGARQVLKEANSDPDMHEMAALEVKELEEKIDYLETRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ W+ L+S S E GGFK V++EI+G VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R TDHRL NF L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRATDHRLGQNFSLNPVLEGDLETVIQSCISQDQQERLAELA 360
Query: 409 ESVGA 413
S A
Sbjct: 361 TSSAA 365
>gi|427732043|ref|YP_007078280.1| peptide chain release factor 1 [Nostoc sp. PCC 7524]
gi|427367962|gb|AFY50683.1| peptide chain release factor 1 [Nostoc sp. PCC 7524]
Length = 366
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 290/365 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ NP EYQK+A+S + L+EVV+TY +K +
Sbjct: 1 MAETYLLEKLKSVEQTFNELTRRLADPDTAQNPDEYQKIAKSRSSLEEVVNTYETWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE +D E+ E+ A E+ L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELVGARQVLKEANSDPELQEIAALEVDELEEKIEYLETRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ W+ L+S S E GGFK V++EI+G VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADSQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L L+G+I++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNFSLNPVLEGDIESLIQSCISQDQQERLAELA 360
Query: 409 ESVGA 413
S A
Sbjct: 361 ASGAA 365
>gi|409990509|ref|ZP_11273873.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca]
gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39]
gi|409938623|gb|EKN79923.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca]
Length = 371
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/370 (60%), Positives = 298/370 (80%), Gaps = 3/370 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+++LADPE+ ++P E+Q++A++ + L++VV+ Y+++K +
Sbjct: 1 MAETYLLDKLKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQEWKTTQ 60
Query: 109 KQLEESRALAKENGND---EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
+L ++ + +E GND +EM EM A E++ L+ +L ELE +LK+LLLP DP D +NIM
Sbjct: 61 TELAGAKQILRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIM 120
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LE+RAG GGDEA IWAGDLVRMY +Y+E W+ L+S S A+ GGFK ++EI+G+RVY
Sbjct: 121 LEIRAGTGGDEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGDRVY 180
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
S+LK+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV ID KDIE+TTARSGGAG
Sbjct: 181 SQLKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEMTTARSGGAG 240
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DLFHKPTGIR+FCTEER+QL+N+ RA+Q+LRAKLYE K+REQQ+ + +
Sbjct: 241 GQNVNKVETAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKLREQQDAVTSM 300
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R SQVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G I + +Q+C +Q+E L
Sbjct: 301 RRSQVGTGSRSEKIRTYNYKDNRVTDHRLGHNFSLAPVLEGGIGDLIQACVIQDQQERLA 360
Query: 406 ELAESVGAPS 415
+LAES S
Sbjct: 361 QLAESTTPAS 370
>gi|425470987|ref|ZP_18849847.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9701]
gi|389883229|emb|CCI36365.1| Peptide chain release factor 1 [Microcystis aeruginosa PCC 9701]
Length = 366
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/360 (63%), Positives = 288/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP+V SNP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLNKLQSVEQTYKELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ E+ A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREIAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQKWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG I+ +QSC A +Q+ L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGAIEEVIQSCIAKDQQGKLAELA 360
>gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
Length = 375
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/363 (63%), Positives = 295/363 (81%)
Query: 48 CMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDC 107
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A++ + L+E V+TY+ +++
Sbjct: 6 IMAESYLLEKLQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQET 65
Query: 108 EKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
+++L+ ++ + KE G D EM EM A E+ L +L +LEE+LK+LLLP DP D +NIMLE
Sbjct: 66 QEELKGAKQIVKEAGGDPEMREMAAMEVSELEEKLEQLEERLKILLLPRDPNDDKNIMLE 125
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI G++VYSK
Sbjct: 126 IRAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSK 185
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LK+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQ
Sbjct: 186 LKFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIQIDPKDIEMTTARSGGAGGQ 245
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE K+REQQE + + R
Sbjct: 246 NVNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEAVSSMRR 305
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
SQVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+GNIDN +++C + +Q+E L EL
Sbjct: 306 SQVGTGSRSEKIRTYNYKDNRVTDHRLGQNFALAGALEGNIDNIIETCISQDQQERLAEL 365
Query: 408 AES 410
A S
Sbjct: 366 ANS 368
>gi|354552754|ref|ZP_08972062.1| Peptide chain release factor 1 [Cyanothece sp. ATCC 51472]
gi|353556076|gb|EHC25464.1| Peptide chain release factor 1 [Cyanothece sp. ATCC 51472]
Length = 369
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/362 (63%), Positives = 295/362 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A++ + L+E V+TY+ +++ +
Sbjct: 1 MAESYLLEKLQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L+ ++ + KE G D EM EM A E+ L +L +LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 EELKGAKQIVKEAGGDPEMREMAAMEVSELEEKLEQLEERLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI G++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIQIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+GNIDN +++C + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFALAGALEGNIDNIIETCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|428301909|ref|YP_007140215.1| peptide chain release factor 1 (bRF-1) [Calothrix sp. PCC 6303]
gi|428238453|gb|AFZ04243.1| bacterial peptide chain release factor 1 (bRF-1) [Calothrix sp. PCC
6303]
Length = 363
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+SA +T+ +L+ +L DP+ +P EYQK+A+S + L+EVV TY +K +
Sbjct: 1 MAEQYLLEKLKSAEQTFHELTRRLGDPDTAKDPDEYQKIAKSRSSLEEVVDTYENWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+++ +R + KE D+EM E+ +SE++ L ++ ELE +L +LLLP DP D +NIMLE+
Sbjct: 61 EEIIGAREVLKEAQGDQEMYEIASSEVQELEQKITELENRLTILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y++ +W+ L+S S AE GGFK ++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYADTQNWRVKLVSESLAEMGGFKEAILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE I + R
Sbjct: 241 VNKVETAADLIHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAITSARRL 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHR+ +NF L L+G+I+N +QSC + +Q++ L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRININFSLNPALEGDIENIIQSCISQDQQDRLAELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|443477009|ref|ZP_21066884.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudanabaena
biceps PCC 7429]
gi|443017932|gb|ELS32274.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudanabaena
biceps PCC 7429]
Length = 368
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/364 (62%), Positives = 296/364 (81%), Gaps = 1/364 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M YLI KLES +T+ +L+ ++ DP+V ++ E+Q++A+ A L+E V TY F+ E
Sbjct: 1 MPAAYLIKKLESVEQTFNELTRRMGDPDVATDHGEFQRIAKVRASLEETVLTYETFRKAE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ +ES+ + KE+ ND E+ EM A E++ LS++L ELE++L++LLLP DP D +NIMLE+
Sbjct: 61 QDYKESQEILKES-NDPELKEMAALEVEELSSKLEELEKRLQILLLPQDPNDDKNIMLEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEAGIWAGDLVR+Y +Y+E+ W+ ++S + AE GGFK ++E++G+RVYSKL
Sbjct: 120 RAGTGGDEAGIWAGDLVRLYTRYAERQGWRVKMVSETLAEMGGFKEAIIEVQGDRVYSKL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE+QGRVHTSTATVAIMPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 180 KFESGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVEIHIDPKDIEMSTARSGGAGGQN 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQ +I + R S
Sbjct: 240 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQAEITSMRRS 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R+T+HRL NF L L+G+++ +QSC + +Q+E L+ELA
Sbjct: 300 QVGTGSRSEKIRTYNYKDSRLTEHRLGQNFTLPPILEGDLEEVIQSCISKDQQERLQELA 359
Query: 409 ESVG 412
+ G
Sbjct: 360 IATG 363
>gi|434400511|ref|YP_007134515.1| Peptide chain release factor 1 [Stanieria cyanosphaera PCC 7437]
gi|428271608|gb|AFZ37549.1| Peptide chain release factor 1 [Stanieria cyanosphaera PCC 7437]
Length = 370
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 289/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +L DP++ +NP E QK+A+ + L+E V+TY ++K
Sbjct: 1 MAEVYLLEKLKSVEQTYQELTRRLGDPDIATNPDELQKIAKIRSSLEETVNTYEEWKKAT 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L ++ + KE G D EM EM A E+ L ++ +LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EELAGAKEIFKEAGGDSEMREMAALEVDQLEEKINQLESRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W L+S S A+ GGFK ++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQNWNVKLVSESLADMGGFKEAILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIEL TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIELKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLY++K+ EQQ+++R R S
Sbjct: 241 VNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMKLAEQQQEVRGLRQS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L S L+GNI++ +QSC + +Q+E L LA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFALASALEGNIEDMIQSCISQDQQERLAALA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|428205237|ref|YP_007089590.1| peptide chain release factor 1 (bRF-1) [Chroococcidiopsis thermalis
PCC 7203]
gi|428007158|gb|AFY85721.1| bacterial peptide chain release factor 1 (bRF-1) [Chroococcidiopsis
thermalis PCC 7203]
Length = 366
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/362 (61%), Positives = 291/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAEPYL+ KL+S +T+ +L+ +LADP++ ++P E ++A++ + +EVV+TY +K +
Sbjct: 1 MAEPYLLNKLKSVEQTYNELTRRLADPDIATDPVEMHRVAKARSSFEEVVNTYETWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L+ +R + KE +D E+ EM A E++ L +L +LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELKGARQVLKEAASDPELQEMAALEVQELEAQLEQLETRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y+E +W+ L+S S AE GGFK V+EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLIRMYSRYAETQNWRVKLVSESLAEMGGFKEAVLEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDP +IE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIHIDPTEIEMKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL N+ L L+G+I+ +Q C A +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNYSLNPVLEGDIETIIQDCIAQDQQEQLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
gi|238691196|sp|B2ITM5.1|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
Length = 365
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ SNP EYQ++A+S + L+EVV+TY +K +
Sbjct: 1 MAESYLLDKLKSVEQTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTYEIWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE+ +D E+ EM + E+K L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EDLIGAREVYKESASDPELQEMASLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL++MY +Y++ WK +L+S S E GG+K V++EIKGN VYS+L
Sbjct: 121 RAGTGGDEASIWAGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+ GRVHTSTATVAIMPE D+VE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESGGRVHTSTATVAIMPEVDDVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLY+IK+ EQQ + + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLGEQQAAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL N+ LT LDG+++ +QSC +++Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNYSLTPVLDGDLETLIQSCISLDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|434388565|ref|YP_007099176.1| peptide chain release factor 1 [Chamaesiphon minutus PCC 6605]
gi|428019555|gb|AFY95649.1| peptide chain release factor 1 [Chamaesiphon minutus PCC 6605]
Length = 365
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 287/365 (78%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ KL DP++ + SE Q++ ++ A L+EVV T+ +K +
Sbjct: 1 MAESYLLDKLKSVEQTFHELTRKLGDPDIARDASEMQRIGKARAALEEVVETFDLWKQTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE+GND E+ EM + E L + ELE KLKVLLLP DP D +NIMLE+
Sbjct: 61 EDLIGARQIVKESGNDLELQEMASIEAGELEAKSDELERKLKVLLLPKDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEAGIWAGDLVRMY +Y+E WK L+S + AE GGFK V+EI+G +VYS+L
Sbjct: 121 RAGTGGDEAGIWAGDLVRMYSRYAETQHWKVKLVSETLAEMGGFKEAVLEIQGEQVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+ GRVHTSTATVAIMPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTESGGRVHTSTATVAIMPEVDEVEIYIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+Q QNK RA+Q+LRAKLY+IK+REQQE++ + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQRQNKERAMQILRAKLYDIKLREQQEEVTSLRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L L G+++N +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNFGLEQVLSGDLENVIQSCISQDQQERLAELA 360
Query: 409 ESVGA 413
S G
Sbjct: 361 ASTGG 365
>gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
gi|238689045|sp|B1XJH8.1|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
Length = 363
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 219/360 (60%), Positives = 295/360 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++++ +LADP++ +NP E Q++A+ + L+E V+T+ ++K+ +
Sbjct: 1 MAEAYLLDKLKSVEQTFQEMTRRLADPDIATNPDELQRVAKIRSSLEETVNTFNQWKEAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L ++ + KE+ D EM EM A E++ L N + LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EELRGAKEILKESAGDPEMKEMAALEVEELENTIDTLENRLKILLLPKDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y+E +W+ L+S S A+ GGFK V++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTAT+A+MPE D+VEV IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDDVEVEIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE++++ QQE++ + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEEVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L L+G+I++ +Q+C + +Q+ LE+LA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFSLAPALEGDIEDMLQACISQDQQAQLEQLA 360
>gi|440756697|ref|ZP_20935897.1| peptide chain release factor 1 [Microcystis aeruginosa TAIHU98]
gi|440172726|gb|ELP52210.1| peptide chain release factor 1 [Microcystis aeruginosa TAIHU98]
Length = 366
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+V SNP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLNKLQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ +L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAALEAKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E +WK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY+IK++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+ LEELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNENFSLDRILDGDIEEVIQSCIAKDQQGKLEELA 360
>gi|443329324|ref|ZP_21057911.1| peptide chain release factor 1 [Xenococcus sp. PCC 7305]
gi|442791066|gb|ELS00566.1| peptide chain release factor 1 [Xenococcus sp. PCC 7305]
Length = 370
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 288/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +L DP++ +NP E QK+A++ + L+E V+TY ++K
Sbjct: 1 MAETYLLEKLKSVEQTFEELTRRLGDPDIATNPEELQKVAKARSSLEETVNTYEQWKQST 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L E + + KE +D EM EM A EI L ++ +LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELAEVKEIFKEAASDPEMKEMAALEIAELEEKIPQLETQLKVLLLPKDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W L+S S A+ GGFK ++EI+G VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAETQNWTVKLLSESLADMGGFKEAILEIQGQSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+V V IDPKDIE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEAGGRVHTSTATVAIMPEVDDVAVKIDPKDIEMKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYEIK+ EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLAEQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNR+TDHRL NF L + L+G+IDN ++SC + +Q+E L ELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRITDHRLGKNFALANSLEGDIDNIIESCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
Length = 369
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/362 (63%), Positives = 294/362 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A++ + L+E V+TY+ +++ +
Sbjct: 1 MAESYLLEKLQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L+ ++ + KE G D EM EM A E+ L +L +LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 EELKGAKQIVKEAGGDPEMREMAAMEVSELEEQLQQLEEQLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI G++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEIQIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE K+REQQE + + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+GNIDN +++C + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFALAGALEGNIDNIIETCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|434404986|ref|YP_007147871.1| bacterial peptide chain release factor 1 (bRF-1) [Cylindrospermum
stagnale PCC 7417]
gi|428259241|gb|AFZ25191.1| bacterial peptide chain release factor 1 (bRF-1) [Cylindrospermum
stagnale PCC 7417]
Length = 366
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/362 (62%), Positives = 287/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ NP EYQ +A+S + L+EVV+TY ++ +
Sbjct: 1 MAETYLLEKLKSVEQTFNELTRRLADPDTARNPDEYQTIAKSRSSLEEVVNTYEIWRTVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE D E EM A E++ L +L LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EDLAGARQVLKEANGDPEWQEMAALEVEELGQKLEYLESRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y++ +W+ L+S SE E GG K ++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYTRYAQTQNWRVKLVSESEGEMGGVKEAILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+RVTDHRL N+ L L+G+I+ +QSC +++Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRVTDHRLGQNYSLNPVLEGDIETVIQSCISLDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 VS 362
>gi|428773812|ref|YP_007165600.1| peptide chain release factor 1 (bRF-1) [Cyanobacterium stanieri PCC
7202]
gi|428688091|gb|AFZ47951.1| bacterial peptide chain release factor 1 (bRF-1) [Cyanobacterium
stanieri PCC 7202]
Length = 369
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YLI KL S T+ +L+ KL DP++ +NP+E QK+A+ + L+E V TY ++K+ +
Sbjct: 1 MAESYLIDKLNSVETTFNELTRKLGDPDIATNPTELQKIAKMRSSLEETVITYTQWKEAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L+ ++ + KE+ +D EM E+ EI+ L +++ ELE KLKVLLLP DP D +NIMLE+
Sbjct: 61 EELKGAKEIYKESNSDPEMKELAGMEIEELESKIEELENKLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W L+S S AE GGFK ++EI G VYS+L
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAELVNWNVKLLSESPAEMGGFKEAILEITGENVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKD++++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDLDISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QL+N+ RA+Q+LRAKLYE+K++EQQ+ + + R S
Sbjct: 241 VNKVETAVDLTHKPTGIRIFCTEERSQLKNRERAMQILRAKLYEMKLKEQQDSVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNR TDHRL NF+L S L+G I + +Q+C A +Q+E LEE+A
Sbjct: 301 QVGTGARSEKIRTYNYKDNRATDHRLNRNFDLNSVLEGKISDVIQACIAQDQQEKLEEMA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|443321110|ref|ZP_21050174.1| peptide chain release factor 1 [Gloeocapsa sp. PCC 73106]
gi|442789138|gb|ELR98807.1| peptide chain release factor 1 [Gloeocapsa sp. PCC 73106]
Length = 370
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/362 (61%), Positives = 291/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA+ YL+ KL+S +T+++L+ +LADP++ +NP E Q++A++ + L+E V+TY ++ +
Sbjct: 1 MAQAYLLEKLQSVEQTYRELTRRLADPDIATNPEELQQVAKARSSLEETVNTYENWQKAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
L+ ++ + KE G D+EM EM E+ L ++ +LE ++K+LLLPSDP D +NIMLE+
Sbjct: 61 IDLQGAKQVLKEAGGDQEMREMAQLEVAELEEKIAQLETRMKILLLPSDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y+E +W L+S S A+ GGFK ++EIKG VYS+L
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYAETQNWTVQLVSESLADMGGFKEAILEIKGEMVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEV V IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVAVKIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKP+GIR+FCTEER+QL+N+ RALQ+LRAKLYEI ++EQQ ++ + R S
Sbjct: 241 VNKVETAVDLFHKPSGIRVFCTEERSQLKNRERALQILRAKLYEISLQEQQAEVTSLRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L FL+G+++ A+QSC + +Q+E LE LA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLDRFLEGDLEEAIQSCISQDQQERLEALA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|427736175|ref|YP_007055719.1| peptide chain release factor 1 (bRF-1) [Rivularia sp. PCC 7116]
gi|427371216|gb|AFY55172.1| bacterial peptide chain release factor 1 (bRF-1) [Rivularia sp. PCC
7116]
Length = 365
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/363 (62%), Positives = 290/363 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ NP E+Q++A++ + L+EVV+TY +K+ +
Sbjct: 1 MAEQYLLEKLQSVEQTFNELTRRLGDPDTARNPEEFQEVAKARSGLEEVVNTYETWKNTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R +AKE+ +D E+ EM E+K L + ELE++LKVLLLP DP D +NIMLE+
Sbjct: 61 EELVGAREVAKESQSDPELHEMATLEVKELEQKTEELEDRLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY++Y+ WK L+S S AE GGFK V+EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYERYASTQGWKVKLLSESLAEMGGFKEAVLEIKGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+ GRVHTSTATVA+MPE D+VE+ IDPKD E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTESGGRVHTSTATVAVMPEVDDVEIHIDPKDYEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DL+HKPTGIRIFCTEER+QLQNK RALQ+LRAKLYE+K+REQQE + R S
Sbjct: 241 VNKVETAADLYHKPTGIRIFCTEERSQLQNKERALQILRAKLYEMKLREQQEAVTDLRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL N+ L L+G++D +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGENYSLNPVLEGDLDPIIQSCISQDQQERLAELA 360
Query: 409 ESV 411
SV
Sbjct: 361 ASV 363
>gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
Length = 367
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 291/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KLES +T+ +L+ ++ADP+V +P E+QK+A+ A L+E V TY ++++ +
Sbjct: 1 MAESYLLQKLESVEETFGELTRRMADPDVAKDPDEFQKIAKMRASLEETVQTYHQWQETD 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L +R + KE +D EM EM A E+ L L LE++LK+LLLP DP D +NIMLE+
Sbjct: 61 GELAGAREVYKEAASDSEMKEMAAMEVTELEESLAALEKRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEAGIWAGDL+R+Y +Y+E WK L+S S A+ GG K ++EI+GN+VYSKL
Sbjct: 121 RAGTGGDEAGIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEIQGNQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE+ GRVHTSTATVA+MPE D+VE+ IDPK+I +TTARSGGAGGQN
Sbjct: 181 KFESGVHRVQRVPLTESGGRVHTSTATVAVMPEVDDVEIHIDPKEIVMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE+K++EQ+++I + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQKDEISSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G+R+EKIRTYNYKDNRVTDHRL NF L + L+G+I+ VQ+C + +Q+E LEELA
Sbjct: 301 QVGSGSRSEKIRTYNYKDNRVTDHRLNQNFSLPAVLEGDIETVVQTCISQDQQERLEELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
gi|226739098|sp|B7KI17.1|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
Length = 370
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/362 (64%), Positives = 293/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP++ +NP E Q++A++ + L+E V+TY ++ +
Sbjct: 1 MAEAYLLEKLKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTK 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+++ +R + KE G D EM EM A E++ L +L +LE KLKVLLLP DP D +NIMLE+
Sbjct: 61 EEITGARQILKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W L+S S A+ GGFK ++EIKG++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIEVSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+I+ +QSC +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLVGALEGDIEVIIQSCIGKDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|427417968|ref|ZP_18908151.1| bacterial peptide chain release factor 1 (bRF-1) [Leptolyngbya sp.
PCC 7375]
gi|425760681|gb|EKV01534.1| bacterial peptide chain release factor 1 (bRF-1) [Leptolyngbya sp.
PCC 7375]
Length = 367
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/366 (61%), Positives = 289/366 (78%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP+V +P+E+QK+A++ A L+E ++TY +K +
Sbjct: 1 MAEQYLLDKLKSVDQTFEELTRRLADPDVAKDPTEFQKIAKARASLEETITTYDDWKKAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
E ++ + KE+ DEE+ EM A E+K L + +LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 SDCEGAQEVLKESAGDEELREMAAMEVKELQATIGDLENRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAGIWAGDL+RMY +YSE WK +S S A+ GG K ++EI G++VYSKL
Sbjct: 121 RAGAGGDEAGIWAGDLLRMYSRYSEGQGWKVQTVSQSVADMGGCKEAILEITGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE GRVHTSTATVA+MPE D+VEV ID KDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATETSGRVHTSTATVAVMPEVDDVEVKIDSKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+ ++EQQ ++ R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMMLQEQQAEVTDMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L+ L+G+I+ VQSC +Q+ LE+LA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLSPVLEGDIEIMVQSCITQDQQAKLEQLA 360
Query: 409 ESVGAP 414
+P
Sbjct: 361 AETNSP 366
>gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A]
gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium
UCYN-A]
Length = 367
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/362 (62%), Positives = 288/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+ +L+ +LADP + +NP+E QK+A++ + L+E V+ Y ++K E
Sbjct: 1 MAESYLLNKLHSVEQTFNELTRRLADPSIATNPNELQKVAKTRSSLEETVNAYEQWKKTE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+L E++ + K+ G D EM EM + E K L +L LEE +K+LLLP DP D +NIMLE+
Sbjct: 61 KELLETKQIVKDAGGDHEMREMASIEAKELEIKLNNLEELMKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL RMY +Y+E +W L + S A+ GG K ++EI G++V+SKL
Sbjct: 121 RAGTGGDEASIWAGDLARMYSRYAESQNWVVKLANESLADMGGIKETILEITGDKVFSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV ID KDI+++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVKIDAKDIDMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE K+REQQE+I + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEEISSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L+ L+G+ID ++SC + +Q+E L+ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFALSGILEGDIDILIESCISQDQQERLQELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Moorea producens 3L]
gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Moorea producens 3L]
Length = 370
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 293/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+ +L+ +LADP++ ++P+E Q++A++ A L+EVV+TY +K +
Sbjct: 1 MAETYLLEKLNSVEQTYHELTRRLADPDIATDPNELQRVAKARASLEEVVATYDNWKKTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE+ + EM EM A E++ L ++ LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EDLAGARQILKESTGEPEMQEMAALEVEELQTKVEHLERELKILLLPKDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +YSE +W+ L+S S A+ GGFK ++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE DEV+V IDPK+IE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDEVDVEIDPKEIEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL+HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYEIK++EQQE + + R +
Sbjct: 241 VNKVETAVDLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQQEAVTSMRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL N+ L L+G+++ +Q+C + +Q+E LE+LA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNYSLAPLLEGDLEGLIQACISQDQQEQLEKLA 360
Query: 409 ES 410
S
Sbjct: 361 SS 362
>gi|427711674|ref|YP_007060298.1| peptide chain release factor 1 (bRF-1) [Synechococcus sp. PCC 6312]
gi|427375803|gb|AFY59755.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp.
PCC 6312]
Length = 364
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/347 (64%), Positives = 280/347 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+++L+ ++ADP+V NP E+QK+A+ A L+E V TY +K
Sbjct: 1 MAEAYLLDKLRSVEQTFEELTKRMADPDVAVNPDEFQKVARHRAALEETVDTYGAWKKAT 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L E++ L +E+ +D E+ +++ E+ LS + LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 QELSEAKQLLRESASDVELRQLVEEEVTELSQTVESLESQLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAGIW GDLVR+Y KY++ +W+ +L+S S AE GGFK ++EIKG RVYSKL
Sbjct: 121 RAGAGGDEAGIWVGDLVRLYSKYAKTQAWQVSLVSESLAEMGGFKEAILEIKGERVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIE++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QL+NK RA+Q+LRAKLY+IK+REQQ I R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLKNKERAMQILRAKLYDIKLREQQGAITDLRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSC 395
QVGTG R+EKIRTYNYKD+RVTDHRL NF L S L+G ID+ +Q+C
Sbjct: 301 QVGTGDRSEKIRTYNYKDDRVTDHRLGENFSLGSALEGEIDSIIQAC 347
>gi|434391748|ref|YP_007126695.1| bacterial peptide chain release factor 1 (bRF-1) [Gloeocapsa sp.
PCC 7428]
gi|428263589|gb|AFZ29535.1| bacterial peptide chain release factor 1 (bRF-1) [Gloeocapsa sp.
PCC 7428]
Length = 366
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M E YL+ KL+S +T+ +L+ +LADP++ +P EYQK+A++ + L+EVV+TY +K +
Sbjct: 1 MPETYLLNKLKSVEQTFNELTRRLADPDIARDPGEYQKVAKARSSLEEVVTTYETWKTTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L +R + KE D E+ EM A E+ L +L +LE +LK+LLLP DP D +N MLE+
Sbjct: 61 DELVGAREVMKEANGDAELQEMAALEVAELEEQLEQLEVRLKILLLPRDPNDEKNTMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +WK LIS S AE GGFK ++EI+G++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQNWKVKLISESLAEMGGFKEAILEIQGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIEIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+++ +Q+C + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLAPVLEGDLEPMIQACISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|334120580|ref|ZP_08494659.1| Peptide chain release factor 1 [Microcoleus vaginatus FGP-2]
gi|333456182|gb|EGK84817.1| Peptide chain release factor 1 [Microcoleus vaginatus FGP-2]
Length = 364
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/362 (60%), Positives = 293/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ ++ADP+V + E+Q++A++ + L+EVV T+ +K +
Sbjct: 1 MAESYLLDKLKSVEQTFNELTRRMADPDVARDNQEFQRVAKARSSLEEVVDTFALWKTTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE D +M EM A E++ L ++L LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EDLVGTRQVLKEAAGDRDMQEMAALEVQELESKLENLESRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+R+Y +Y++ W+ L+S S AE GGFK V++E++G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRLYSRYAQTQGWQVKLVSESLAEMGGFKEVILEVQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GR+HTSTATVA+MPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRIHTSTATVAVMPEVDDVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQ++++++RL+
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQDEVKSRRLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L S L+G+I+ +Q+C + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGENFSLNSVLEGDIEGIIQTCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|428320046|ref|YP_007117928.1| bacterial peptide chain release factor 1 (bRF-1) [Oscillatoria
nigro-viridis PCC 7112]
gi|428243726|gb|AFZ09512.1| bacterial peptide chain release factor 1 (bRF-1) [Oscillatoria
nigro-viridis PCC 7112]
Length = 364
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 291/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ ++ADP+V + E+Q++A++ + L+EVV T+ +K +
Sbjct: 1 MAESYLLDKLKSVEQTFNELTRRMADPDVARDNQEFQRVAKARSSLEEVVDTFALWKTTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE D +M EM A E+ L ++L LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EDLVGARQVLKEAAGDRDMQEMAALEVDELESKLENLESRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+R+Y +Y++ W+ L+S S AE GGFK V++EI G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRLYTRYAQTQGWQVKLVSESLAEMGGFKEVILEITGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQ++++++RL+
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQDEVKSRRLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L S L+G+I+ +Q+C + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGENFSLNSVLEGDIEGIIQTCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|414076515|ref|YP_006995833.1| peptide chain release factor 1 [Anabaena sp. 90]
gi|413969931|gb|AFW94020.1| peptide chain release factor 1 [Anabaena sp. 90]
Length = 366
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 288/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ SNP EYQK+A+S + L+EVV TY +K +
Sbjct: 1 MAEIYLLDKLKSVEQTFNELTRRLADPDTASNPDEYQKIAKSRSSLEEVVDTYETWKTTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L +R + KE+ +D E+ +M A E+ L +L LE +LKVLL+P DP D +NIMLE+
Sbjct: 61 DELVGARQILKESNSDLELQQMAALEVSELEEKLEYLENRLKVLLIPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +YS+ WK L+S S E GG+K V++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYSDVQGWKVKLVSESSGEMGGYKEVILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE+ GRVHTSTAT+AIMPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFESGVHRVQRVPATESGGRVHTSTATIAIMPEVDEVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQ+ + + R
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYELKLREQQDAVTSMRRL 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+RVTDHRL NF L L+G+I+ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRVTDHRLGQNFTLNPILEGDIETVIQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|428771165|ref|YP_007162955.1| peptide chain release factor 1 (bRF-1) [Cyanobacterium aponinum PCC
10605]
gi|428685444|gb|AFZ54911.1| bacterial peptide chain release factor 1 (bRF-1) [Cyanobacterium
aponinum PCC 10605]
Length = 369
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/362 (64%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S T+K+L+ +L DP++ +NP E QK+A+ + L+E V TY++++ +
Sbjct: 1 MAESYLLEKLASVEMTFKELTRRLGDPDIATNPDELQKVAKMRSSLEETVMTYQEWQKAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+ +R + KE+ +D EM EM EI+ L N+L ELE+KLK+LLLP DP D +NIMLE+
Sbjct: 61 EDLKGAREILKESKSDPEMQEMAQLEIEELENKLEELEQKLKILLLPKDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W L+S S AE GGFK ++EI G VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAEMMNWSVKLLSESLAEMGGFKEAILEITGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE DEVEV IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDEVEVQIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QL+N+ RA+Q+LRAKLYEIK+ EQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLKNRERAMQILRAKLYEIKLSEQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNR TDHRL NF+L+S L+G ID+ +Q+C A +Q+E LE++A
Sbjct: 301 QVGTGARSEKIRTYNYKDNRATDHRLGRNFDLSSVLEGKIDDVIQACIAQDQQERLEKMA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
Length = 365
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 218/362 (60%), Positives = 293/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ ++ADP+V +P+E+Q++A++ + L+EVV+T+ +K+ +
Sbjct: 1 MAESYLLDKLKSVEQTFNELTRRMADPDVAKDPNEFQRVAKARSSLEEVVNTFELWKETQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D EM EM + E+ L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 ENLAGAKQILKESASDPEMQEMASLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWA DLVRMY +Y++ +W+ ++S S E GFK ++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAADLVRMYSRYAQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAVMPEVDDVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQ+++ + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQDEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L + L+G+ID+ +Q+C +++Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGENFSLNTILEGDIDDVIQACISLDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
Length = 365
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/362 (63%), Positives = 286/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ SNP EYQK+A+S + L+EVV+TY +K
Sbjct: 1 MAESYLLDKLKSVEQTFHELTRRLADPDTASNPDEYQKIAKSRSSLEEVVNTYETWKIAT 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE D E+ EM A E+ L +L LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELAGARQVLKEANGDPELHEMAALEVNELEEKLEHLEARLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y+E WK L+S S E GGFK V++EI+G+ VYS+L
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEIQGDSVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDDVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+ EQQ+ + + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQQDAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL N+ L L+G ++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNYSLNPVLEGELETVIQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
Length = 364
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/362 (63%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ NP EYQK+A+S + L+EVV+TY +K +
Sbjct: 1 MAETYLLEKLQSVEQTFHELTRRLADPDTAKNPDEYQKIAKSRSSLEEVVNTYETWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ +D E+ EM A E+K L +L LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELVGARQVLKESNSDPELQEMAALEVKELEEKLEYLESRLKVLLLPCDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ WK L+S S E GGFK V++EI+G+RVYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+ GRVHTSTAT+AIMPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESGGRVHTSTATIAIMPEVDDVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE + + R S
Sbjct: 241 VNKVETAADLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+RVTDHRL NF L L+G+++ VQSC + Q+E L EL
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRVTDHRLGNNFTLNPVLEGDLETIVQSCISQYQQERLAELV 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|443313539|ref|ZP_21043150.1| peptide chain release factor 1 [Synechocystis sp. PCC 7509]
gi|442776482|gb|ELR86764.1| peptide chain release factor 1 [Synechocystis sp. PCC 7509]
Length = 364
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+V +P E Q++A++ + L+ VV +Y ++K
Sbjct: 1 MAETYLLDKLKSVEQTFNELNRRLADPDVARDPDEMQRVAKARSSLERVVDSYEEWKIAT 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ +D E+ E+ ASE++ L +L +LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EELVGARQVFKESASDLELQEIAASEVEELEAKLEQLEIRLKMLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E WK L+S S AE GGFK V+EI+G++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAEVQRWKVKLVSESLAEMGGFKEAVLEIQGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE DEVE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAVMPEVDEVEIHIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DL+HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K+REQQE + + R
Sbjct: 241 VNKVETAADLYHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQEAVTSMRRL 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L ++G+++ QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFVLNPVIEGDLETITQSCISQDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299]
gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299]
Length = 366
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/360 (61%), Positives = 288/360 (80%), Gaps = 1/360 (0%)
Query: 49 MAEP-YLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDC 107
MA P +LI KLES+ +T K+L+ +LADP+V S+ E+QKL++++ EL VV Y ++K+C
Sbjct: 1 MAAPDFLIKKLESSERTHKELTFRLADPDVASDAKEFQKLSKALGELTGVVDMYARYKEC 60
Query: 108 EKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
+ + ++R + K+ D EM M EI +L E+ ELEEK+ + LLP DPLD +NIMLE
Sbjct: 61 QAEEADAREMVKDAAGDAEMEAMAREEIAALKGEMDELEEKMTIALLPKDPLDDKNIMLE 120
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAG GGDEAGIWAGDL RMYQ+Y++ W T++SS+ A+ GG+K +V+EI G+ VYS+
Sbjct: 121 IRAGTGGDEAGIWAGDLWRMYQRYAQSKGWSATILSSNAADFGGYKEIVVEINGDSVYSE 180
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LK+E+GVHRVQRVP TE+QGRV TSTATVA+MPE DEVEV ID KDIE+++ARSGGAGGQ
Sbjct: 181 LKWEAGVHRVQRVPATESQGRVQTSTATVAVMPEVDEVEVKIDDKDIEISSARSGGAGGQ 240
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVETAIDL HKPTGIR+FCTEERTQL+N+ RA Q+LRAKL+EI++ EQQ++I +R
Sbjct: 241 NVNKVETAIDLLHKPTGIRVFCTEERTQLKNRIRAFQILRAKLFEIQLEEQQKEIAGRRK 300
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+QVG+GAR+EKIRTYN+KD+RV+DHRL NF L +F+ G+I A+ C AMEQ+E LEEL
Sbjct: 301 AQVGSGARSEKIRTYNWKDSRVSDHRLGQNFPLDNFIGGDIGPAIGGCQAMEQQEKLEEL 360
>gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 404
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/397 (55%), Positives = 306/397 (77%), Gaps = 5/397 (1%)
Query: 13 YTPLNHSPQRQRFGGSQSKRNV-VFPSLSFRTPKLICMAEP-YLITKLESAAKTWKDLSV 70
+ P +P R +R+V + P+ + TP + A P +LI KLES+ +T K+L+
Sbjct: 5 FAPSTSTPSTSR---RPWRRSVHLRPNQTRPTPSHVAPAAPKFLIDKLESSTQTHKELTF 61
Query: 71 KLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEM 130
+LADP+V SN E+QKL++++ EL VV Y ++K+C ++L+E++A+ K+ D EM EM
Sbjct: 62 RLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAKAMVKDAAGDLEMGEM 121
Query: 131 IASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQK 190
E +L+ E+ LEE + + LLP DPLD +NI+LE+RAG GGDEAGIWAGDL RMY +
Sbjct: 122 AREEATALNEEMDALEESMTMALLPRDPLDEKNIVLEIRAGTGGDEAGIWAGDLWRMYSR 181
Query: 191 YSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVH 250
Y++ WK ++++++ A+ GG+K +V+E+ G+ VYS+LK+E+GVHRVQRVP TE+QGR+
Sbjct: 182 YADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVHRVQRVPATESQGRIQ 241
Query: 251 TSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCT 310
TSTATVA+MPE DEVEV ID KDIELTTARSGGAGGQNVNKVETA+DL HKPTGIRIFCT
Sbjct: 242 TSTATVAVMPEVDEVEVKIDDKDIELTTARSGGAGGQNVNKVETAVDLVHKPTGIRIFCT 301
Query: 311 EERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVT 370
EERTQL+N+ RA+Q+LR++L+E+++ EQ +++ +R +QVG+GAR+EKIRTYNYKDNRV+
Sbjct: 302 EERTQLKNRIRAMQILRSRLFELQMEEQAKEVAGRRKAQVGSGARSEKIRTYNYKDNRVS 361
Query: 371 DHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
DHR+ NF L F++G++ A+ +C AMEQ+E LEEL
Sbjct: 362 DHRVGENFPLEGFMNGDVSPAIGACQAMEQREKLEEL 398
>gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
gi|189039957|sp|B0C424.1|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
Length = 363
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/347 (62%), Positives = 278/347 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DPEV +NP+E+Q++A++ A L+E V+T+ +K +
Sbjct: 1 MAEAYLLEKLKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKATQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +++ +AK+ D E+ EM A E L+ +L LE KLKVLLLP DP D +NIMLE+
Sbjct: 61 QELADAQQMAKDGDEDPELKEMAAMEAAELTEKLDGLETKLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDLVR+Y KY+E W+ L+S S E GGFK ++EI+G RVYSKL
Sbjct: 121 RAGAGGDEASIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATEASGRVHTSTATVAVMPEVDDVEIEIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE++++EQQ + + R S
Sbjct: 241 VNKVETAVDLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQEQQASVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSC 395
QVGTGAR+EKIRTYNYKDNR TDHRL NF L L G+I+ +++C
Sbjct: 301 QVGTGARSEKIRTYNYKDNRATDHRLNQNFPLEKVLVGDIELILETC 347
>gi|359463600|ref|ZP_09252163.1| peptide chain release factor 1 [Acaryochloris sp. CCMEE 5410]
Length = 363
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/347 (62%), Positives = 277/347 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DPEV +NP+E+Q++A++ A L+E V+T+ +K +
Sbjct: 1 MAEAYLLEKLKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKVTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +++ +AK+ D E+ EM A E L +L LE KLKVLLLP DP D +NIMLE+
Sbjct: 61 QELADAQQMAKDGDEDPELKEMAAMEAAELGEKLEGLETKLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDLVR+Y KY+E W+ L+S S E GGFK ++EI+G RVYSKL
Sbjct: 121 RAGAGGDEASIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATEASGRVHTSTATVAVMPEVDDVEIEIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE++++EQQ + + R S
Sbjct: 241 VNKVETAVDLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQEQQASVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSC 395
QVGTGAR+EKIRTYNYKDNR TDHRL NF L L G+I+ +++C
Sbjct: 301 QVGTGARSEKIRTYNYKDNRATDHRLNQNFPLEKVLVGDIELILETC 347
>gi|428218102|ref|YP_007102567.1| peptide chain release factor 1 (bRF-1) [Pseudanabaena sp. PCC 7367]
gi|427989884|gb|AFY70139.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudanabaena sp.
PCC 7367]
Length = 371
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/364 (63%), Positives = 295/364 (81%), Gaps = 1/364 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M PYL+ KLES +T+ +L+ ++ADP+V ++P E+Q++A+ + L+E V+TY ++ +
Sbjct: 1 MPAPYLLHKLESVEQTFSELTRRMADPDVATDPYEFQRIAKHRSSLEETVNTYETWQKMD 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
L+ ++ L KE+ +D EM+E+ EI+ LS +L ELEEKLKVLLLP DP D +NIMLE+
Sbjct: 61 ADLKSAKELLKES-DDPEMSELAKLEIEELSGQLEELEEKLKVLLLPQDPNDEKNIMLEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+R Y +Y+E W+ L+S S A+ GG+K V++EI+G+RVYSKL
Sbjct: 120 RAGTGGDEASIWAGDLLRFYSRYAETQGWRVKLVSESLADMGGYKEVILEIQGDRVYSKL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE GRVHTSTATVA+MPE ++VEV IDPKDIE++TARSGGAGGQN
Sbjct: 180 KFESGVHRVQRVPVTETSGRVHTSTATVAVMPEVEDVEVHIDPKDIEISTARSGGAGGQN 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+++REQQE + + R S
Sbjct: 240 VNKVETAADLLHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMQLREQQEAVTSMRRS 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL +NF L LDG+I+ +QSC + +Q+E L+ELA
Sbjct: 300 QVGTGARSEKIRTYNYKDNRVTDHRLGLNFNLPQVLDGDIEELIQSCISKDQRERLKELA 359
Query: 409 ESVG 412
ES G
Sbjct: 360 ESNG 363
>gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
Length = 1699
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/355 (60%), Positives = 283/355 (79%)
Query: 53 YLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
+LI KLE+ AKT +L+ ++ADPEV S+P E+Q+L+++ EL+ VV Y +++ C ++E
Sbjct: 54 FLIKKLEATAKTHAELNERMADPEVTSDPKEFQRLSKACGELNYVVDLYARYRACVDEIE 113
Query: 113 ESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
E+RA+ K+ DEEM M EI +L+ E +L E + + LLP DPLD +NIMLE+RAG
Sbjct: 114 EARAMVKDAAGDEEMVAMAREEIDALTEESDKLVEDMTLALLPKDPLDEKNIMLEIRAGT 173
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEAGIWAGDL RMY +++E+ W+ T+++S+ A+ GGFK +V EIKG VYS LK+E+
Sbjct: 174 GGDEAGIWAGDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEA 233
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+ TSTATVAIMPE DEVEV ID KD++++TARSGGAGGQNVNKV
Sbjct: 234 GVHRVQRVPATETQGRIQTSTATVAIMPEVDEVEVQIDEKDLDISTARSGGAGGQNVNKV 293
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETAIDL HKPTGIR+FCTEERTQL+N+ RA+Q+LRAKL+EI++ EQQ+ I +R SQVG+
Sbjct: 294 ETAIDLMHKPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQLEEQQKAISDKRKSQVGS 353
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
G+R+EKIRTYN+KD+RV+DHR+ NF L +FLDG+I A+ + A+EQ+E L EL
Sbjct: 354 GSRSEKIRTYNWKDSRVSDHRIGTNFPLQTFLDGDIKGAIGAMQALEQQEKLAEL 408
>gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
nagariensis]
gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
nagariensis]
Length = 415
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/370 (58%), Positives = 292/370 (78%), Gaps = 2/370 (0%)
Query: 46 LICMA-EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKF 104
+ C A E Y++ KL +A T+K+L +K+ADPEV +N +E+QK+A++ A+L+E V+ YR +
Sbjct: 45 IACNALETYMVEKLSAAEMTFKELQMKMADPEVAANSTEFQKVAKAAADLEETVNAYRTY 104
Query: 105 KDCEKQLEE-SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARN 163
KD EKQL + S L E +D EMAE +EI L L +L++KL++ L+P DPLD RN
Sbjct: 105 KDTEKQLSDASEYLKNEAADDPEMAEFARAEIAELEVSLAQLQDKLRLQLVPKDPLDDRN 164
Query: 164 IMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNR 223
IMLE+RAGAGGDEA IWAGD++RMYQ+Y+ + WK +L+S ++ E GG+K V++EI G
Sbjct: 165 IMLEIRAGAGGDEASIWAGDMMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEISGTS 224
Query: 224 VYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGG 283
VYSKLK+E+GVHRVQRVP TEA GRVHTSTATVA+MPE ++V+V I+P +IE+ AR+ G
Sbjct: 225 VYSKLKWEAGVHRVQRVPATEAAGRVHTSTATVAVMPEVEDVDVQINPSEIEVKFARASG 284
Query: 284 AGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIR 343
AGGQNVNKVETA+DL HKPTGIR+FC EERTQ QNK RA Q+LRAKLYE++++ QQ +I
Sbjct: 285 AGGQNVNKVETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYEMEIQRQQAEIY 344
Query: 344 TQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKEL 403
R SQVGTG R+EKI+TYNYKD+RV+DHR+K NF+L S L+G++++++Q+ + +Q+E
Sbjct: 345 AARKSQVGTGDRSEKIKTYNYKDSRVSDHRIKQNFDLNSVLEGDLEDSLQAMISADQQEK 404
Query: 404 LEELAESVGA 413
L+ LAESV A
Sbjct: 405 LKMLAESVIA 414
>gi|428777710|ref|YP_007169497.1| peptide chain release factor 1 (bRF-1) [Halothece sp. PCC 7418]
gi|428691989|gb|AFZ45283.1| bacterial peptide chain release factor 1 (bRF-1) [Halothece sp. PCC
7418]
Length = 364
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/361 (59%), Positives = 286/361 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE Y++ KL+S +T+ +L+ +L DP++ ++P E Q++A++ + L+E V TY +K +
Sbjct: 1 MAESYVLEKLQSVEETYNELTRRLGDPDIATDPEELQRVAKARSSLEETVETYNLWKQTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
L+E++ + K+ D EM E+ A+E++ L +L LE ++K+LLLP DP D +NIMLEV
Sbjct: 61 TDLKEAQEVYKDAEGDPEMQELAAAEVQELEEKLENLERRMKLLLLPRDPNDEKNIMLEV 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA +W GDLVRMY +Y+E WK +L S S +E GGFK ++EIKG+RVYSKL
Sbjct: 121 RAGTGGDEACLWVGDLVRMYSRYAENQGWKLSLASESLSETGGFKEAILEIKGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VEV IDPKD+E+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAVMPEVDDVEVEIDPKDVEITTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DL++KP GIRIFCT+ER+QLQN+ RA+Q+LR+KLYE+K+REQ E + + R S
Sbjct: 241 VNKVETAADLYYKPLGIRIFCTQERSQLQNRERAMQILRSKLYEMKLREQYESVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNRVTDHRL +NF L L+GN+++ +QSC + +Q+E L EL
Sbjct: 301 QVGTGGRSEKIRTYNYKDNRVTDHRLGVNFNLEPVLEGNLEDLIQSCISQDQQERLAELT 360
Query: 409 E 409
E
Sbjct: 361 E 361
>gi|427726113|ref|YP_007073390.1| peptide chain release factor 1 (bRF-1) [Leptolyngbya sp. PCC 7376]
gi|427357833|gb|AFY40556.1| bacterial peptide chain release factor 1 (bRF-1) [Leptolyngbya sp.
PCC 7376]
Length = 372
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/368 (60%), Positives = 293/368 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++++ +LADP++ +NPSE Q++A+ A L+E V+TY +K+ +
Sbjct: 1 MAEAYLLDKLKSVEQTFQEMTRRLADPDIATNPSELQRVAKIRASLEETVNTYEAWKNTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++LE ++ + KE+ D EM EM A E+ L ++ ELEEKLK+LLLP DP D +NIMLE+
Sbjct: 61 EELEGAQEILKESAGDPEMKEMAAMEVADLDAQIEELEEKLKILLLPKDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEAGIWAGDL+RMY +YSE W+ L+S S A+ GG K V++E++G VYSKL
Sbjct: 121 RAGTGGDEAGIWAGDLLRMYSRYSEGQGWRLKLLSESTADMGGIKAVILEVQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TE GRVHTSTATVAIMPE D+VEV ID KDIE+TTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPVTEGGGRVHTSTATVAIMPEVDDVEVKIDAKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+++++Q++++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMELQKQRDEVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L + L+G I+ +Q+C +Q+ LE+LA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFGLATALEGEIEGMIQACITQDQQAQLEQLA 360
Query: 409 ESVGAPSG 416
A G
Sbjct: 361 SDDSATGG 368
>gi|428221097|ref|YP_007105267.1| peptide chain release factor 1 [Synechococcus sp. PCC 7502]
gi|427994437|gb|AFY73132.1| peptide chain release factor 1 [Synechococcus sp. PCC 7502]
Length = 364
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/364 (61%), Positives = 290/364 (79%), Gaps = 1/364 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M PYL++KL+S +T+ +L+ ++ DP+V +PSE+Q++A++ A L+E V T+ + E
Sbjct: 1 MPAPYLLSKLKSVEQTFNELTRRMGDPDVAKDPSEFQRIAKARASLEETVQTFDTLRKAE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
L+ES + KE+ ND E+ E+ + EI+ L +L LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 TDLQESEQILKES-NDPELKEIASLEIEELRAKLEHLEERLKLLLLPQDPNDDKNIMLEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+R+Y +Y+++ WK L+S S AE GGFK V+EI+G+RVYSKL
Sbjct: 120 RAGTGGDEASIWAGDLLRLYSRYADRQGWKVKLVSESIAELGGFKEAVLEIQGDRVYSKL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TEA GRVHTSTATVA+MPE D VEV IDP DIELTT RSGGAGGQN
Sbjct: 180 KFESGVHRVQRVPATEASGRVHTSTATVAVMPEVDAVEVHIDPNDIELTTIRSGGAGGQN 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+ C EER+QLQN+ RA+Q+LRAKLYEIK++EQQ+ + + R S
Sbjct: 240 VNKVETAVDLMHKPTGIRVKCMEERSQLQNRERAMQILRAKLYEIKMQEQQDAVTSMRRS 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKD+R+TDHRL NF L S LDG+++ +Q+C + +Q+E L+ELA
Sbjct: 300 QVGTGARSEKIRTYNYKDSRLTDHRLNQNFTLASILDGDLEEVIQTCISQDQQERLQELA 359
Query: 409 ESVG 412
S+G
Sbjct: 360 TSMG 363
>gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
Length = 370
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/362 (63%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A+ + L+E V TY +K +
Sbjct: 1 MAESYLLEKLQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L ++ + K+ G D EM EM A E++ L+ +L ELE+KLK+LLLP DP D +NIMLE+
Sbjct: 61 EELIGAKQILKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI+G+RVYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV ID KDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEITTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLF+KP GIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQ+ + + R S
Sbjct: 241 VNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKLREQQDAVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L L+G+I+ +QSC + +Q+E LEELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFSLAGTLEGDIEEIIQSCISQDQQERLEELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii]
gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii]
Length = 383
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/370 (56%), Positives = 294/370 (79%), Gaps = 2/370 (0%)
Query: 46 LICMA-EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKF 104
+ C A E Y++ KL +A T+K+L +++ADPEV ++ +E+QK+A++ ++L+ V+TYR +
Sbjct: 14 VACRALEGYMVDKLRAAEMTFKELQMRMADPEVAASATEFQKVAKAASDLETTVNTYRAY 73
Query: 105 KDCEKQLEES-RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARN 163
+D E+QL ++ + L +E +D EMAE EI L L +L++ L++ L+P DPLD RN
Sbjct: 74 QDTEQQLADAQKYLKEEASSDPEMAEFAREEIAELEASLTKLQDALRLQLVPRDPLDDRN 133
Query: 164 IMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNR 223
IMLE+RAGAGGDEA IWAGDL+RMYQ+Y+ + WK +L+S ++AE GG+K ++++I G+
Sbjct: 134 IMLEIRAGAGGDEASIWAGDLMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQINGDS 193
Query: 224 VYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGG 283
VYSKLK+E+GVHRVQRVP TEA GRVHTSTATVA+MPE +EV+V ++ DI+L AR+ G
Sbjct: 194 VYSKLKWEAGVHRVQRVPATEAAGRVHTSTATVAVMPEVEEVDVALNMNDIDLKFARASG 253
Query: 284 AGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIR 343
AGGQNVNKVETA+DL HKPTGIR+FC EERTQ QNK RA Q+LRAKLYE++++ QQ +I
Sbjct: 254 AGGQNVNKVETAVDLMHKPTGIRVFCQEERTQAQNKERAFQILRAKLYELELQRQQAEIY 313
Query: 344 TQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKEL 403
R SQVGTG R+EKI+TYNYKD+RV+DHR+KMNF+L S ++G++++ +Q+ + +Q+E
Sbjct: 314 AARKSQVGTGDRSEKIKTYNYKDSRVSDHRIKMNFDLNSIIEGDLEDTLQAMISADQQEK 373
Query: 404 LEELAESVGA 413
L+ELAESV A
Sbjct: 374 LKELAESVAA 383
>gi|384251832|gb|EIE25309.1| peptide chain release factor 1 [Coccomyxa subellipsoidea C-169]
Length = 364
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/362 (57%), Positives = 286/362 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M EP ++ KLE + +K LS ++ADP V NP+E+Q++A++ A L++ V+ + K+KD
Sbjct: 1 MQEPLMLEKLERTDEAYKSLSGRMADPTVAGNPTEFQRVAKAAAALEDQVTAFSKYKDLV 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
L+E++ L +E D+EMAE+ EI+S+SNEL L ++LK+LLLP DPLD +N+MLE+
Sbjct: 61 TALQEAKQLLRECDGDQEMAELAREEIESVSNELNSLTKELKILLLPKDPLDEKNVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA ++A +L+RMYQKY++ +WK + +S SEA+ GG K +E+ G VYSKL
Sbjct: 121 RAGTGGEEAALFAAELLRMYQKYADLQNWKLSRVSESEADNGGLKEAFIEVSGTAVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TE+ GRVHTSTATVA+MPEAD+V+V IDPKDIELTTARSGGAGGQN
Sbjct: 181 KYESGVHRVQRVPATESSGRVHTSTATVAVMPEADDVDVKIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTE+R+Q QN+ RA+Q+LRA+L+EI++ +Q+ +R S
Sbjct: 241 VNKVETAVDLIHKPTGIRIFCTEQRSQGQNRERAMQILRARLFEIELEKQRAAEAARRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKI+TYN+KD+RV+DHR K+NF+L LDG +D +Q+ ++Q+E +E A
Sbjct: 301 QVGTGSRSEKIKTYNFKDSRVSDHRTKLNFDLNKVLDGELDTCIQALINLDQQEQMEAFA 360
Query: 409 ES 410
E+
Sbjct: 361 EA 362
>gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
gi|226739099|sp|B7K205.1|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
Length = 370
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A+ + L+E V TY +K +
Sbjct: 1 MAESYLLEKLQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L ++ + K+ G D EM EM A E++ L+ +L ELE+KLK+LLLP DP D +NIMLE+
Sbjct: 61 EELIGAKQILKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI+G+RVYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV ID KDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEITTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLF+KP GIRIFCTEER+QLQN+ RA+Q+LRAKLY++K+REQQ+ + + R S
Sbjct: 241 VNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKLREQQDAVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L L+G+I+ +QSC + +Q+E LEELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFSLAGTLEGDIEEIIQSCISQDQQERLEELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|452820069|gb|EME27117.1| peptide chain release factor RF-1 [Galdieria sulphuraria]
Length = 425
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/359 (57%), Positives = 275/359 (76%), Gaps = 1/359 (0%)
Query: 46 LICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFK 105
L+C P L+ KL+S+ + + L KLA+P+V+ P+E +++++ A L+++V++Y ++
Sbjct: 52 LLCRLNPNLVRKLKSSVERYHTLGEKLAEPQVLKEPAELKRISKLRASLEDLVNSYTTWE 111
Query: 106 DCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
++L ++ L E +D EM +++ E+ L L ++E LK LLLP DP D RN+M
Sbjct: 112 QLTEELNSTKQLLYEE-SDPEMKQLVQMELSDLEKRLDQVENNLKQLLLPKDPNDERNVM 170
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
+EVRAG GGDEA IWAGDLVR++QKY+E +WK ++S E + GG+K ++E+KG VY
Sbjct: 171 IEVRAGTGGDEANIWAGDLVRVFQKYAELRNWKAIIVSCHEGDAGGYKECILEVKGESVY 230
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
SK+K+E+GVHRVQR+P TE GRVHTSTATVA+MPE DEVEV IDPKD+E++TARSGGAG
Sbjct: 231 SKMKWEAGVHRVQRIPTTETSGRVHTSTATVAVMPEVDEVEVEIDPKDVEVSTARSGGAG 290
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETAIDLFHKPTGIRIFCTEER+QLQNK RA Q+LRAKLYEI+++EQQ+ I
Sbjct: 291 GQNVNKVETAIDLFHKPTGIRIFCTEERSQLQNKERAFQILRAKLYEIRLKEQQDAITGM 350
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELL 404
R SQVG+GARAEKIRTYNYKD RVTDHRL MNF L FL G+++ Q+C +Q++ L
Sbjct: 351 RRSQVGSGARAEKIRTYNYKDARVTDHRLGMNFSLDQFLQGDLEPMTQACMIADQQQRL 409
>gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9301]
gi|166223586|sp|A3PF19.1|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
9301]
Length = 364
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 280/358 (78%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ +L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEVGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ + V
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVINACIAQEQKRMMEDFNKGV 363
>gi|428781730|ref|YP_007173516.1| peptide chain release factor 1 [Dactylococcopsis salina PCC 8305]
gi|428696009|gb|AFZ52159.1| peptide chain release factor 1 [Dactylococcopsis salina PCC 8305]
Length = 364
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/361 (59%), Positives = 287/361 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE Y++ KL+S +T+ +L+ +L DP++ ++P E Q++A++ + L+E V TY ++K +
Sbjct: 1 MAESYVLEKLQSVEETYNELTRRLGDPDIATDPDELQRVAKARSSLEETVETYNQWKKAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+E++ + K+ D EM E+ ASE+K L +L +LE ++K+LLLP DP D +N MLE+
Sbjct: 61 EDLKEAQEIYKDASGDPEMQELAASEVKELEEKLEQLERRMKLLLLPRDPNDEKNTMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA +W GDLVRMY +Y+E W +L S S +E GGFK ++EIKG+RVYSKL
Sbjct: 121 RAGTGGDEACLWVGDLVRMYSRYAETQGWSLSLASESLSETGGFKEAILEIKGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VEV IDPKD+E+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAVMPEVDDVEVEIDPKDVEITTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA DLF+KP GIRIFCT+ER+QL+N+ RA+Q+LR+KLYEIK+REQ + + + R S
Sbjct: 241 VNKVETAADLFYKPLGIRIFCTQERSQLKNRERAMQILRSKLYEIKLREQYDSVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNRVTDHRL +NF L L+G++++ +QSC + +Q+E L EL
Sbjct: 301 QVGTGGRSEKIRTYNYKDNRVTDHRLGVNFNLEPVLEGSLEDLIQSCISQDQQERLAELT 360
Query: 409 E 409
E
Sbjct: 361 E 361
>gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9202]
gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9202]
Length = 364
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/358 (56%), Positives = 278/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A+ ++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASVSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEIGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK +LE+ A +
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVINACIAQEQKRMLEDFANEI 363
>gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9215]
gi|238686831|sp|A8G733.1|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
9215]
Length = 364
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/358 (56%), Positives = 277/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A+ ++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASVSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GSEACIWAGDLARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEIGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK +LE+ A +
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVINACIAQEQKRMLEDFANEI 363
>gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119361626|sp|Q2JL68.1|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 360
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 281/360 (78%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA LI +L++ T+++L+V+LADP+V ++P+E Q++A++ + L+ V + ++
Sbjct: 1 MASAQLIDQLKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQAFHDWQKLN 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+++ L +E+ +D E+ M +E++ L +LEEKL +LLLP DP D +NIMLE+
Sbjct: 61 RDLQQTEELLRESASDPELEAMARAELEQLRARQEQLEEKLTLLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA +WA DL RMY +Y+E+ W L S SE E GG+K ++EI+G++VYSKL
Sbjct: 121 RAGTGGEEAALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEIQGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEAQGRVHTSTATVA+MPE DEVEVVIDPKDIE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDEVEVVIDPKDIEIKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQ I + R
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQASISSARRM 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L LDG +D+ +Q+C + QKELL EL+
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLNQNFPLQPILDGELDDLIQACIGLYQKELLAELS 360
>gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str.
AS9601]
gi|229470358|sp|A2BTA9.1|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
AS9601]
Length = 364
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 279/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ +L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPIDLEVGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ V
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVIDACIAQEQKRMMEDFNNEV 363
>gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 343
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 196/336 (58%), Positives = 268/336 (79%)
Query: 72 LADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMI 131
+ADP V +P E+QKL++++ EL VV Y ++K+C K++ E+RA+AK+ D+EM M
Sbjct: 1 MADPSVTGDPKEFQKLSKALGELTSVVEQYARYKECMKEISEARAMAKDAAGDDEMVAMA 60
Query: 132 ASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKY 191
EI +L+ E L E + + LLP DPLD +NIMLE+RAG GGDEAGIWAGDL RMY ++
Sbjct: 61 KEEIDALTTESDALVETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWAGDLYRMYMRF 120
Query: 192 SEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHT 251
+E+ W+ ++++++ A+ GG+K +V+EIKG+ VYS LK+E+GVHRVQRVP TE QGR+ T
Sbjct: 121 AEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVPATETQGRIQT 180
Query: 252 STATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTE 311
STATVA+MPE DEVEV ID D++++TARSGGAGGQNVNKVETAIDL HKPTGIR+FCTE
Sbjct: 181 STATVAVMPEVDEVEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMHKPTGIRVFCTE 240
Query: 312 ERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTD 371
ERTQ++N+ RA+Q+LRAKL+E+++ EQ++ + +R SQVG+G+R+EKIRTYN+KD+RV+D
Sbjct: 241 ERTQMKNRIRAMQILRAKLFELQLEEQRKAVSDKRKSQVGSGSRSEKIRTYNWKDSRVSD 300
Query: 372 HRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
HR+ NF L +FLDG+I A+ A+EQ+E L EL
Sbjct: 301 HRIGANFSLQNFLDGDIKGAIGGMQALEQEEKLAEL 336
>gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9312]
gi|119361576|sp|Q318L3.1|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
marinus str. MIT 9312]
Length = 364
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 278/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ +L +L +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GSEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEVGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ V
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVIDACIAQEQKRMMEDFNNDV 363
>gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|81575585|sp|Q7UZX1.1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 364
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/357 (56%), Positives = 280/357 (78%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++ +L ++LADP++ +NP + + +A+ A+L+ +V + + D +K++ +
Sbjct: 6 LIARLKNASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND++M +I E+ SL + +L EKL + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKQLLKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W IS+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP +IE+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTEIEIGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRL QVG+G
Sbjct: 246 TAIDLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLMQVGSG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+KDNR TDHRL NF L L G +D+ + +C A EQK +LE+ E+
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFALEPILAGQLDDVIYACLAQEQKRMLEDFNEN 362
>gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9515]
gi|229470357|sp|A2BYQ7.1|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
9515]
Length = 364
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 281/360 (78%), Gaps = 6/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A+K++ +L ++LADP++ +NP + + +A+ A+L+ +V + + D +K++++
Sbjct: 6 LIARLKTASKSFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDD 65
Query: 114 SRALAKENGNDEEMAEMIASEI---KSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
SR L K+N ND++M +I E+ + L N LI+ K+ + LLP DP D R++MLE+RA
Sbjct: 66 SRQLLKDNRNDKDMELLINEELCNLEVLKNSLIQ---KVTIALLPKDPRDERSVMLEIRA 122
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGG+EA IWAGDL RMY++Y ++ W IS+SE++ GGFK +V+ IKG+ VYS+LK+
Sbjct: 123 GAGGNEACIWAGDLARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKF 182
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVN
Sbjct: 183 EAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPSDLEIGTARSGGAGGQNVN 242
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
KVETAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E +K R+QRL QV
Sbjct: 243 KVETAIDLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANDKERSQRLMQV 302
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
GTG R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ E+
Sbjct: 303 GTGDRSEKIRTYNFKDNRTTDHRLGSNFALEPILAGQLDEVIDACIAQEQKRIMEDFNEN 362
>gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
gi|119361625|sp|Q2JUK1.1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
Length = 361
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/361 (58%), Positives = 283/361 (78%), Gaps = 1/361 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA LI +L++ T+++L+V+LADP+V ++P+E Q++A++ + L+ V T+ +++
Sbjct: 1 MASAQLIEQLKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQTFHEWQKLT 60
Query: 109 KQLEESRALAKENGNDE-EMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
++L+++ L +E +D+ E+ M +E++ L +LEEKL +LLLP DP D +NIMLE
Sbjct: 61 RELKQTEELLREVASDDPELEAMARAELEQLRVRQEQLEEKLTLLLLPRDPNDEKNIMLE 120
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAG GG+EA +WA DL RMY +Y+E+ W L S SE E GG+K ++EI+G++VYSK
Sbjct: 121 IRAGTGGEEAALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEIRGDQVYSK 180
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LK+E+GVHRVQRVP TEAQGRVHTSTATVA+MPE DEVEVVIDPKDIE+ TARSGGAGGQ
Sbjct: 181 LKFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDEVEVVIDPKDIEIKTARSGGAGGQ 240
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQ I + R
Sbjct: 241 NVNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQASISSARR 300
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G +D +Q+C + QKELL EL
Sbjct: 301 MQVGTGSRSEKIRTYNYKDNRVTDHRLNQNFLLEPILEGELDELIQACIGLYQKELLAEL 360
Query: 408 A 408
+
Sbjct: 361 S 361
>gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946, partial [Chlorella
variabilis]
Length = 360
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 278/362 (76%), Gaps = 3/362 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
+ + Y++ KLE K++K+L ++ADPEV N + YQKL ++++++ + V Y +KD E
Sbjct: 1 LQDQYVLAKLEETEKSFKELQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+QL +++ L KE+ D EMAE+ E+++L + + E+LK LLLP DPLD +NIMLEV
Sbjct: 61 RQLADAKELLKESEGDPEMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEV 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA +WA DL+RMYQKY++ WK +L+S S AE GG+K V++I G+R +L
Sbjct: 121 RAGTGGEEAALWAADLIRMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGDR---QL 177
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TE GRVHTSTATVAIMPE D+V V IDPKDI LTTAR+GGAGGQN
Sbjct: 178 KYESGVHRVQRVPATETSGRVHTSTATVAIMPEVDDVAVKIDPKDIALTTARAGGAGGQN 237
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFC EERTQ +N+ RA+ LLRAKL+E+++ +Q+ +I +R S
Sbjct: 238 VNKVETAVDLMHKPTGIRIFCQEERTQGRNRERAMALLRAKLFELELEKQRSEISARRKS 297
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKI+TYNYKD R++DHR K+N++L ++G +D +Q+ ++Q+E+L +L
Sbjct: 298 QVGTGSRSEKIKTYNYKDTRMSDHRSKINYDLNKVMEGALDECIQTMVMLDQQEMLRDLL 357
Query: 409 ES 410
E+
Sbjct: 358 ET 359
>gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205]
Length = 367
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/361 (55%), Positives = 273/361 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M +L +LE+A T++ L +LADP+V +NP++ + +A+ A L+ +V Y +
Sbjct: 1 MDASFLRERLETARTTFETLERQLADPDVAANPAQLEPIARERARLEPLVLGYDQLCQWR 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
KQ +E+R L KE+ D+EM + E+ L+ ++ +EE+L + LLP DP D R++MLE+
Sbjct: 61 KQEQEARQLLKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y++ WK +S+SEAE GG+K +++ I+G+ V+S+L
Sbjct: 121 RAGAGGDEAAIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKLYE ++ E K R+ RL+
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELAEANAKERSARLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L G + + +C + +Q+ LEELA
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLQGQLAELIGACVSADQRRQLEELA 360
Query: 409 E 409
+
Sbjct: 361 D 361
>gi|255641350|gb|ACU20952.1| unknown [Glycine max]
Length = 230
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/230 (87%), Positives = 218/230 (94%)
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQ 246
MY++YSE+NSWK +L+SSS AEKGG+KT VMEIKGNRVYSKLKYESGVHRVQRVP TE Q
Sbjct: 1 MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60
Query: 247 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 306
GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR
Sbjct: 61 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 120
Query: 307 IFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKD 366
IFCTEERTQL+N++RA QLLRAKLYEIKVREQQE +R QR QVGTGAR+EKIRTYNYKD
Sbjct: 121 IFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQESLRNQRKLQVGTGARSEKIRTYNYKD 180
Query: 367 NRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPSG 416
NRVTDHRLK+N+ELTSFLDG+I++AVQSC MEQKELLEELAESVGAP+G
Sbjct: 181 NRVTDHRLKINYELTSFLDGDIEDAVQSCVTMEQKELLEELAESVGAPTG 230
>gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora]
gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora]
Length = 366
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 272/363 (74%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M +L +LE+A +T+++L +LADP+V NP + QK A+ + L+ +V + K +
Sbjct: 1 MDADFLSARLETATRTFENLERQLADPDVAVNPDQLQKFAREHSRLEPIVIDSKALKQAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
KQ EE+ L +E+ ND EM + EI +L + L ++L + LLP D D R++MLE+
Sbjct: 61 KQREEAILLLREHRNDPEMEALANEEIGALDEVIERLTKQLTLALLPRDSRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
R+G GG EA IWAGDL RMY++YS+ W+ +SSSEAE GGF+ +++ I+G VYSKL
Sbjct: 121 RSGTGGGEACIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAIRGEGVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD+VEV +DPKDIE++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATESQGRVHTSTATVAVMPEADKVEVQLDPKDIEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E ++ E + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERQLAEAAAAESSARKA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL NF L S L+GN++ + +C A++Q++ LE LA
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGQNFSLDSILNGNLEEIIDTCIALDQQKQLENLA 360
Query: 409 ESV 411
+++
Sbjct: 361 DTM 363
>gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str.
NATL1A]
gi|229470356|sp|A2C4X1.1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
NATL1A]
Length = 365
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 276/360 (76%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI +LE+A ++++L ++LADP+V S+P + + +A+ + L+ +V+ Y K + E
Sbjct: 1 MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E++ L KE+ +D+EM + E+++L EL +KL + LLP DP D R++MLE+
Sbjct: 61 KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGG+EA +WAGDL RMY++Y ++ W ISS+EA+ GGF+ +++ +KG VYS+L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+ D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVKIESTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETAIDLFHKP+GIR+FCT+ER+Q+QN+ RA+++LRAKL E+++ E K R+ RLS
Sbjct: 241 VNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIAEANAKERSARLS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L L G +++ + +C A EQK +EEL+
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIAEEQKRQMEELS 360
>gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101]
Length = 365
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/365 (53%), Positives = 271/365 (74%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M +L +L++A T+ L +LADP+V +NP++ + +A+ A L+ +V Y + + +
Sbjct: 1 MDASFLSERLDAARTTFDTLERQLADPDVAANPAQLEPIARERARLEPLVMGYDELQTLQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
Q +++R L +E+ D ++ + E+ L+ + LEE+L + LLP DP D R++MLE+
Sbjct: 61 GQEQQARELLRESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY++Y++ WK +S+SEAE GG+K +++ IKG+ V+S+L
Sbjct: 121 RAGAGGDEAALWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPGDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKLYE ++ + R+ RL+
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELATANAEERSARLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL NF L L G + + +C + +Q+ LEELA
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLQGQLAELIGACVSADQRRQLEELA 360
Query: 409 ESVGA 413
E G
Sbjct: 361 EQAGG 365
>gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102]
gi|46576726|sp|Q7U4H2.1|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102]
Length = 365
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/361 (54%), Positives = 273/361 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L+ +LE+A ++++L +LADP+V ++P+ +K+A+ A L+ +V + + + E
Sbjct: 1 MDASTLLARLEAATASFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ ++SR L KE D M E+ ++ SL+ EL EKL V LLP DP D R++MLE+
Sbjct: 61 GEQKQSRELLKECRGDAAMEELAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++YS++ W ISS+EA+ GGF+ +++ +KG+ V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKP+GIR+FCT+ER+QLQN+ RAL++LRAKL E + RE + + R +
Sbjct: 241 VNKVETAVDLLHKPSGIRVFCTQERSQLQNRERALEILRAKLLEQEQREAAARESSDRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L LDG +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFSLDPVLDGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 E 409
+
Sbjct: 361 Q 361
>gi|422294271|gb|EKU21571.1| peptide chain release factor 1 [Nannochloropsis gaditana CCMP526]
Length = 367
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/353 (54%), Positives = 271/353 (76%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
+TKLES ++T+K+L+ +L DP+V++NP+ ++ Q ++EVV +Y++++ + +
Sbjct: 10 LTKLESFSRTYKELTERLGDPDVIANPTTLMQVNQERMNIEEVVVSYQEWQKLAADMAGA 69
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ L E D EM EM +EIK L ++E++L VL+LPSDPLD +N+MLE+RAG GG
Sbjct: 70 KQLFNEAAGDPEMKEMARAEIKDLEERQEDIEKQLVVLMLPSDPLDDKNVMLEIRAGTGG 129
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
EAG++AGDLV +YQ+Y + W+ ++ S ++GG+K V+EI+G++VYSKLK+E+GV
Sbjct: 130 SEAGLFAGDLVDVYQRYGQSLGWRVRVVEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGV 189
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP TE QGRVHTSTATVA+MPE DEV+V IDPKDI LTTARSGG+GGQNVNKVET
Sbjct: 190 HRVQRVPATETQGRVHTSTATVAVMPEVDEVQVKIDPKDITLTTARSGGSGGQNVNKVET 249
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+DL HKPTGIRIFCT+ER+QL+NK A+ +LR++L++++ +Q++ + QR SQ+G+G+
Sbjct: 250 AVDLLHKPTGIRIFCTQERSQLKNKELAMSMLRSRLFDLEQEKQRDAVAGQRRSQIGSGS 309
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+KD+R TDHRL NF L FLDGN++ C +EQ+E LE +
Sbjct: 310 RSEKIRTYNWKDSRCTDHRLGTNFPLQMFLDGNLEEITNQCLLLEQQEKLEAM 362
>gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str.
NATL2A]
gi|119361577|sp|Q46IT8.1|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
marinus str. NATL2A]
Length = 365
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 276/360 (76%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI +LE+A ++++L ++LADP+V S+P + + +A+ + L+ +V+ Y K + E
Sbjct: 1 MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E++ L KE+ +D+EM + E+++L EL +KL + LLP DP D R++MLE+
Sbjct: 61 KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGG+EA +WAGDL RMY++Y ++ W ISS+EA+ GGF+ +++ +KG VYS+L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+ D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVKIESTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETAIDLFHKP+GIR+FCT+ER+Q+QN+ RA+++LRAKL E+++ E K R+ RLS
Sbjct: 241 VNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELAEANAKERSARLS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L L G +++ + +C A EQK +EEL+
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIAEEQKRQMEELS 360
>gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
Length = 365
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/364 (53%), Positives = 270/364 (74%), Gaps = 1/364 (0%)
Query: 51 EPYLI-TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEK 109
+P L+ +LE+A +T++ L +LADP V SNP + Q +A+ A L+ +V R+ +
Sbjct: 2 DPSLLHDRLEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLA 61
Query: 110 QLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVR 169
+ ++R L +++ D M E+ + E+K L+ + L L + LLP DP D R++MLE+R
Sbjct: 62 EEADARTLLRDHRGDRAMEELASEELKQLAERIHSLRTSLTIALLPRDPRDERSVMLEIR 121
Query: 170 AGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLK 229
AGAGGDEA IWAGDL RMY++Y++ W+ +S+SEAE GG+K +++ I+G V+S+LK
Sbjct: 122 AGAGGDEAAIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLK 181
Query: 230 YESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNV 289
+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+P D+E++TARSGGAGGQNV
Sbjct: 182 FEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPGDVEISTARSGGAGGQNV 241
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NKVETA+DL HKP+GIR+FCT+ER+Q+QN+ RA+++LRAKLYE ++ E + R+ RL+Q
Sbjct: 242 NKVETAVDLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLYERQLAEANARERSARLAQ 301
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
VG+G R+EKIRTYNYKDNR TDHRL NF L L+G + + + +C A +Q L+ELA
Sbjct: 302 VGSGDRSEKIRTYNYKDNRATDHRLGRNFSLEPVLNGQLQDVIGACIAADQARQLDELAA 361
Query: 410 SVGA 413
V A
Sbjct: 362 DVSA 365
>gi|424513468|emb|CCO66090.1| peptide chain release factor 1 [Bathycoccus prasinos]
Length = 448
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 278/355 (78%)
Query: 53 YLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
+L+ KL++ K K+L KLADP V + E+QK++++M L +VV TY+K+K+C + E
Sbjct: 86 FLVAKLDANEKMHKELMDKLADPAVQGDSKEFQKVSKAMGALQDVVHTYQKYKECLQGSE 145
Query: 113 ESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
E++A+AKE D+EM M E SL E L ++L + LLP+DPLD++NIMLE+RAG
Sbjct: 146 EAKAMAKEAAGDDEMVAMAKEEADSLMQEAETLVDQLTLSLLPTDPLDSKNIMLEMRAGT 205
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA I+ GDL RMY ++++ WK +SSS + GG+K +V+EIKG VYS+LK+E+
Sbjct: 206 GGDEAAIFVGDLHRMYTRFAQTEGWKMETVSSSSGDFGGYKEIVVEIKGENVYSQLKWEA 265
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP T+AQGR+ TSTATVA+MPEADEVEV I +D+E+ TARSGGAGGQNVNKV
Sbjct: 266 GVHRVQRVPSTDAQGRIQTSTATVAVMPEADEVEVEIKDEDLEIQTARSGGAGGQNVNKV 325
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETAID+FHKP+GIR+FC+E+RTQL+N+ RA+Q+LR KL+EI++ E+ ++I R +QVG+
Sbjct: 326 ETAIDMFHKPSGIRVFCSEQRTQLKNRIRAMQILRNKLFEIQLEERNKEIAGARKAQVGS 385
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
GAR+EKIRTYN+KD+RV+DHRL+ NF L +F++G I +++ SC ++EQ++ L EL
Sbjct: 386 GARSEKIRTYNWKDSRVSDHRLQKNFPLENFMNGEIKDSIASCQSLEQQDRLAEL 440
>gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
gi|119361628|sp|Q0ID34.1|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
Length = 364
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 270/356 (75%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI++LE+A+ ++ +L +LADP+V ++P + +A+ + L+ +V Y + E + +
Sbjct: 6 LISRLEAASSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQ 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L KE+ D M E+ E++ L +L +++ + LLP DP D R++MLE+RAGAG
Sbjct: 66 AKSLLKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA +WAGDL RMY+++S + W T +S++EA+ GG+K +++ +KG+ V+S+LK+E+G
Sbjct: 126 GDEACLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP+D++++TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVQIDPRDLDISTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+DL HKPTGIR+FCT+ER+Q+QN+ RAL++LRAKLYE ++ E R+ R SQVGTG
Sbjct: 246 TAVDLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQLAEANASERSARRSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN KDNR+TDHRL NF L L+G +D+ + +C A EQ+ L +L+E
Sbjct: 306 DRSEKIRTYNAKDNRMTDHRLGRNFSLDPVLEGQMDDVIDACIAEEQRGKLADLSE 361
>gi|427703098|ref|YP_007046320.1| peptide chain release factor 1 [Cyanobium gracile PCC 6307]
gi|427346266|gb|AFY28979.1| peptide chain release factor 1 [Cyanobium gracile PCC 6307]
Length = 371
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 273/363 (75%), Gaps = 3/363 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L ++L++A +T++ L +LADP V S+P+ Q +A+ A L+ +V+ Y++ + E
Sbjct: 1 MDSELLQSRLDTACRTFQTLERQLADPAVASDPARLQAIARERARLEPLVNDYQRLRKLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIK---SLSNELIELEEKLKVLLLPSDPLDARNIM 165
++ EE+RAL + + +D E+ A + SL + L ++L + LLPSDP D R++M
Sbjct: 61 QEREEARALLRAHRDDPAAEELAALASEELVSLEGLIGALNDRLTLSLLPSDPRDERSVM 120
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
LE+RAGAGGDEA +WAGDL RMY++Y++ W+ +S+SEA+ GG+K +++ I+G+ VY
Sbjct: 121 LEIRAGAGGDEASLWAGDLARMYERYAQGQGWQVQPVSASEADLGGYKELILAIRGDGVY 180
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
S+LK+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E++TARSGGAG
Sbjct: 181 SRLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPGDLEISTARSGGAG 240
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQNVNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYE ++ E R+
Sbjct: 241 GQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYERQLAEANAAERSV 300
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
R SQVG+G R+EKIRTYN KDNRVTDHRL NF L L G I++ + +C A EQ++ LE
Sbjct: 301 RRSQVGSGDRSEKIRTYNAKDNRVTDHRLGRNFSLEPVLAGQIEDLIGACIAEEQRQGLE 360
Query: 406 ELA 408
LA
Sbjct: 361 ALA 363
>gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421]
gi|46576716|sp|Q7ND15.1|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421]
Length = 364
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/365 (55%), Positives = 258/365 (70%), Gaps = 2/365 (0%)
Query: 49 MAEPYL-ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDC 107
MA P L + KL +T+ DL+ +L DP + SNP E ++ + A L+ V Y ++
Sbjct: 1 MASPDLMVQKLNDIERTYNDLTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQRL 60
Query: 108 EKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
+ R + ++ D E+ E+ E L + LE+++ +LLLP DP D +N+MLE
Sbjct: 61 CAERNAVRQMIRDE-QDPELRELAEEEHTGLEERIARLEDEITLLLLPRDPNDDKNVMLE 119
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAG GGDEA I+AGDL+RMY +Y+E W L S S AE GGFK V++EI+G VYSK
Sbjct: 120 IRAGTGGDEAAIFAGDLMRMYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSK 179
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LK+E+GVHRVQRVP TE QGRVHTSTATVAIMPE +EV+V I+P DIE+TT RSGGAGGQ
Sbjct: 180 LKFEAGVHRVQRVPVTETQGRVHTSTATVAIMPEVEEVDVEINPNDIEITTTRSGGAGGQ 239
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVETA+ L HKP+GI I C EER+QLQNK+RA+Q+LR KLY+IK REQ E++ R
Sbjct: 240 NVNKVETAVHLVHKPSGIHIHCQEERSQLQNKARAMQILRVKLYDIKQREQHEQVSGLRR 299
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
SQVGTG R+EKIRTYNYKDNRVTDHRL NF L + ++G I+ +QS A Q+E L EL
Sbjct: 300 SQVGTGDRSEKIRTYNYKDNRVTDHRLSQNFTLNTAIEGEIETLIQSAIAAAQREQLAEL 359
Query: 408 AESVG 412
A S G
Sbjct: 360 ARSSG 364
>gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
Length = 364
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/357 (53%), Positives = 268/357 (75%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI++L++A ++ +L +LADP+V S+P Q +A+ + L+ +V Y+ + E++ ++
Sbjct: 6 LISRLDAATNSFHNLERQLADPDVASDPKRLQSIARERSRLEPLVQDYQSLQQVEEERQQ 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +L KE+ D M E+ EI+ L+ L E++ + LLPSDP D R++MLE+RAGAG
Sbjct: 66 AESLLKESRGDSGMEELARLEIQDLNERQATLIERVTLALLPSDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA +WAGDL RMY++Y + W +S++ A+ GG++ +++ +KG+ V+S+LK+E+G
Sbjct: 126 GDEACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYRELILSVKGDAVFSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP ++E++TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPTELEISTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKLYE ++ E + R +QVGTG
Sbjct: 246 TAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAEANAAESSARRAQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN KDNRVTDHRL NF L L+G +D+ + +C A EQ+E LE L+ +
Sbjct: 306 DRSEKIRTYNAKDNRVTDHRLGRNFSLDPMLEGQMDDVIGACIAEEQREKLEALSRA 362
>gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
gi|119361630|sp|Q3AMQ9.1|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
Length = 365
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 269/365 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L T+LE+A ++++L +LADP+V ++P + +A+ + L+ +V + + + E
Sbjct: 1 MDASTLFTRLETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ + +R L K++ D M E+ E+ SL + L E+L + LLP DP D R++MLE+
Sbjct: 61 SERDSARQLLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY++YS++ W IS +EA+ GGF+ +++ ++G+ VYS+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD++++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLDISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E + E+ + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L+G +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 ESVGA 413
+ A
Sbjct: 361 DQAEA 365
>gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9211]
gi|238687119|sp|A9BCL8.1|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
9211]
Length = 365
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/361 (54%), Positives = 275/361 (76%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L +LE+A ++++L ++LADP+V S+P + +A+ A L+ +V Y K + E
Sbjct: 1 MDTSTLKIRLETARSSFQNLELQLADPDVASDPKRLETIARERARLEPLVLDYEKLLEIE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L E + + +E+ +D+++ E+ E++ L L +L + LLP DP D R++MLE+
Sbjct: 61 EELLEVKDVLRESKSDKDLEELAQDEMRKLELFKTNLINQLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y ++ W ISS++A+ GGF+ +++ +KG+ V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISVKGDSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DP D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQLDPGDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKL E+++ E K R+ RL+
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLEMEIAEANAKERSARLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L + L+G +DN + +C A EQ+ ++EEL
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGINFPLENVLEGELDNLIGACIAEEQRLMIEELG 360
Query: 409 E 409
E
Sbjct: 361 E 361
>gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803]
gi|166223613|sp|A5GIR6.1|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803]
Length = 365
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/360 (53%), Positives = 267/360 (74%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI++LE+A ++ +L +LADP+V S+P+ Q +A+ + L+ +V+ Y + +
Sbjct: 1 MDPSTLISRLEAARSSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYASLQAVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ E++R L +++ DEEMA + E+ L L E+L + LLP DP D R++MLE+
Sbjct: 61 SEREQARELLRDSRGDEEMAHLAQLELDELDIRHEALIERLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY+++S + W +S+SEA+ GGFK +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGESVFSEL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+P D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPADLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL H+P+GIR+FCT+ER+QLQN+ RA+++LRAKLYE ++ E + + R +
Sbjct: 241 VNKVETAVDLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAEANARESSARRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYN KDNRVTDHRL NF L L G +++ + +C A EQ+ LE L+
Sbjct: 301 QVGTGDRSEKIRTYNAKDNRVTDHRLGRNFSLDPVLQGQMEDVIGACIAEEQRSKLEALS 360
>gi|352096492|ref|ZP_08957319.1| Peptide chain release factor 1 [Synechococcus sp. WH 8016]
gi|351676142|gb|EHA59296.1| Peptide chain release factor 1 [Synechococcus sp. WH 8016]
Length = 364
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/356 (52%), Positives = 268/356 (75%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI++LE+A ++ +L +LADP+V ++P + +A+ + L+ +V Y + E + +
Sbjct: 6 LISRLEAATSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQ 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L KE+ D M E+ E++ L +L +++ + LLP DP D R++MLE+RAGAG
Sbjct: 66 AKSLLKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA +WAGDL RMY+++S + W +S++EA+ GG+K +++ +KG+ V+S+LK+E+G
Sbjct: 126 GDEACLWAGDLARMYERFSSRRGWSVKPVSANEADLGGYKELILSVKGDAVFSELKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP+D++++TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVEIDPRDLDISTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+DL HKPTGIR+FCT+ER+Q+QN+ RAL++LRAKLYE ++ E R+ R +QVGTG
Sbjct: 246 TAVDLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQLAEANASERSARRAQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN KDNR+TDHRL NF L L+G +D+ + +C A EQ+ L +L+E
Sbjct: 306 DRSEKIRTYNAKDNRMTDHRLGRNFSLDPVLEGQMDDVIDACIAEEQRGKLADLSE 361
>gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
Length = 365
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/361 (52%), Positives = 269/361 (74%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI++LE+A ++ +L +LADP+V S+P+ Q +A+ + L+ +V+ Y + +
Sbjct: 1 MDPSTLISRLEAARDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ E++R L +++ DEEMA + E++ L L ++L + LLP DP D R++MLE+
Sbjct: 61 AEREQARELLRDSRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY+++S + W +S+SEA+ GGFK +++ +KG+ V+S+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSEL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+P D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPADLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL H+P+GIR+FCT+ER+QLQN+ RA+++LRAKLYE ++ E + + R +
Sbjct: 241 VNKVETAVDLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAEANARESSARRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYN KDNRVTDHRL NF L L G +++ + +C A EQ+ L L+
Sbjct: 301 QVGTGDRSEKIRTYNAKDNRVTDHRLGRNFSLDPVLQGQMEDVIGACIAEEQRSKLAALS 360
Query: 409 E 409
+
Sbjct: 361 Q 361
>gi|428178072|gb|EKX46949.1| hypothetical protein GUITHDRAFT_157692 [Guillardia theta CCMP2712]
Length = 359
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 271/365 (74%), Gaps = 6/365 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA+ +I +LE+ A+ +++L+ +L DP + ++P+E ++ + A L+++V+ + +K
Sbjct: 1 MADDAMILRLENTARQFEELTSQLGDPSLANDPTELLRVTKKRASLEDIVTCFNDWKTSN 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++LE + L ++ G+D E+ EM EIK+L ++ ELEE+LKVL+LP DP D R++MLE+
Sbjct: 61 EELEGANLLFQDAGDDPELREMAREEIKTLEAKIQELEEQLKVLMLPKDPNDERDVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWA DL+ +Y +Y++ SW +++ SE+ T ++++KG+ VYSKL
Sbjct: 121 RAGTGGDEAAIWARDLLEVYTRYAKTQSWTTSMVDESES------TFILQVKGDSVYSKL 174
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TE QGRVHTSTATVAIMPE DEV V ID KDI LTTARS GAGGQN
Sbjct: 175 KYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDAKDISLTTARSSGAGGQN 234
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVE+A+DL H PTGIR+FC +ER+QL+NK A+Q+LR KLYE+++ EQ +I QR
Sbjct: 235 VNKVESAVDLVHIPTGIRVFCQQERSQLKNKEVAMQILRNKLYELQMEEQMSEISKQRKD 294
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYN+KD R +DHRL NF L FL G++++ +Q C +Q++ L ++A
Sbjct: 295 QVGTGSRSEKIRTYNWKDGRCSDHRLNKNFPLQQFLSGDLESIIQECIFKDQQQKLADMA 354
Query: 409 ESVGA 413
+ V A
Sbjct: 355 QEVTA 359
>gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus]
Length = 448
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/374 (51%), Positives = 279/374 (74%), Gaps = 5/374 (1%)
Query: 40 SFRTPKLICMA-EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVV 98
S R + + MA + +++ +L +T+ +L+ +L DP+V++NP +++Q A ++E+V
Sbjct: 61 SSRGSRALGMALDDFVLEQLSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIV 120
Query: 99 STYRKFKDCEKQLEESRALAKEN---GNDEEMAEMIASEIKSLSNELIELEEKLKVLLLP 155
+ Y ++ + LE ++ + E+ G D EM EM EI+ L + LE K+K+LLLP
Sbjct: 121 NCYAEYTKAAEDLEGAKEMFTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLP 180
Query: 156 SDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTV 215
+DP D RN+MLE+RAG GGDEA +WA +L+ +Y+KY+ + W +I S+ E GGF+TV
Sbjct: 181 TDPNDDRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTV 240
Query: 216 VMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIE 275
+ E+ G++VYSKLKYE+GVHRVQRVP TE QGRVHTSTATVAIMPE DEV V I P+DIE
Sbjct: 241 IAEVNGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIE 300
Query: 276 LTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKV 335
+ TARSGG+GGQNVNKVE+A+DLFHKPTGIRIFCT+ER+QL+N+ A++LLR+++Y+I++
Sbjct: 301 IKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIEL 360
Query: 336 REQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGN-IDNAVQS 394
+QQ + R +QVG+G+R+EKIRTYN+KD+R +DHR+ NF L +FL G+ +D+ + +
Sbjct: 361 EKQQAETSGNRKAQVGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGA 420
Query: 395 CAAMEQKELLEELA 408
C ++Q+EL+ ELA
Sbjct: 421 CILLDQQELMAELA 434
>gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
Length = 365
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/365 (51%), Positives = 267/365 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L +LE+A ++++L +LADP+V ++P + +A+ + L+ +V + + + E
Sbjct: 1 MDASTLFIRLETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ + +R L K++ D M E+ E+ SL + L E+L + LLP DP D R++MLE+
Sbjct: 61 SERDSARQLLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY++YS++ W +S +EA+ GGF+ +++ ++G VYS+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD++++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLDISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E + E+ + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L+G +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 ESVGA 413
+ A
Sbjct: 361 DEAEA 365
>gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
Length = 367
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/364 (53%), Positives = 274/364 (75%), Gaps = 2/364 (0%)
Query: 51 EPYLIT-KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEK 109
+P L+ +LE+A +T++ L +LADP V ++PSE ++L++ A L+ + + ++ ++
Sbjct: 2 DPSLLRERLEAADRTFQALERQLADPAVAADPSELRRLSKERARLEPLATGLGHWQSLQR 61
Query: 110 QLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVR 169
QL+E++ LA+++ D EM +I E++ L +L LE++L + LLPSDP D R++MLE+R
Sbjct: 62 QLKEAQQLARQSKGDPEMEALIQEELRELGAQLDGLEQQLTLALLPSDPRDERSVMLEIR 121
Query: 170 AGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLK 229
AG GGDEA +WAGDL RMY+++++ W +S+SE++ GGFK +++ I+G+ VYS+LK
Sbjct: 122 AGTGGDEAALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFKELILAIRGDGVYSQLK 181
Query: 230 YESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNV 289
YE+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DP D++++TARSGGAGGQNV
Sbjct: 182 YEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQLDPADLDISTARSGGAGGQNV 241
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E ++ E + R +Q
Sbjct: 242 NKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERELAEAAAAESSARRAQ 301
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL-A 408
VG+G R+EKIRTYN KDNRVTDHRL NF L L G + + +C A EQK LE+L A
Sbjct: 302 VGSGERSEKIRTYNAKDNRVTDHRLGRNFALEPVLQGQLAEVIGACVAAEQKTRLEQLVA 361
Query: 409 ESVG 412
E G
Sbjct: 362 EGAG 365
>gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9303]
gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
9303]
Length = 367
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/362 (51%), Positives = 266/362 (73%)
Query: 47 ICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKD 106
+ M LIT+LE+A +++ L +LADP+V ++P + +A+ A L+ +V + +
Sbjct: 1 MGMDSSTLITRLETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQH 60
Query: 107 CEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIML 166
E++ +E++ L +E+ DE M + E++ L L +L + LLPSDP D R++ML
Sbjct: 61 VEQEWQETKQLLRESRGDEAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVML 120
Query: 167 EVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYS 226
E+RAGAGG+EA +WAGDL RMY++Y ++ W +S++EA+ GGF+ +++ IKG+ V+S
Sbjct: 121 EIRAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFS 180
Query: 227 KLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGG 286
+LK+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP ++E++TARSGGAGG
Sbjct: 181 QLKFEAGVHRVQRVPTTESQGRVHTSTATVAVMPEADAVEVQIDPSELEISTARSGGAGG 240
Query: 287 QNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQR 346
QNVNKVETA+DL HKPTGIR+FCT++R+QLQN+ RA+++LRAKL E ++ E + + R
Sbjct: 241 QNVNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLERQIAEANARESSTR 300
Query: 347 LSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEE 406
+QVGTG R+EKIRTYNYKDNR TDHRL NF L L G ++ + +C A EQ+ LEE
Sbjct: 301 RAQVGTGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLTGQLEELIGACIAEEQRHQLEE 360
Query: 407 LA 408
L+
Sbjct: 361 LS 362
>gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|81663962|sp|Q7V9Z0.1|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 365
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/360 (52%), Positives = 271/360 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L +LE+A+ T+ +L ++LADP+V S+P + + +A+ A L+ +V Y++ + +
Sbjct: 1 MDTSTLKARLETASATFNNLELQLADPDVASDPKKLETIARERARLEPLVLDYKELQAID 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ +E++ L +++ +D+EM + E+ L +L +L + LLP DP D R++MLE+
Sbjct: 61 LEYKEAKELLRQSKSDKEMEALAQEELIRLEELEKDLVNRLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y + W +S++EA+ GGF+ +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISVKGKAVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV ++P D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKLEPTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E ++ E K R+ RL+
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIEEANAKERSARLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L + L+G +D+ + +C A EQ+ +E+L
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGVNFPLETVLEGELDDLIGACIAEEQRLKMEKLG 360
>gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307]
gi|166223614|sp|A5GVY9.1|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307]
Length = 364
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 272/362 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + ++ +LE+ +T+ L +LADP V ++P + LA+ + L+ +V Y++ +
Sbjct: 1 MDQSFVTERLEATCRTFNALERQLADPSVAADPEQLLTLAKERSRLEPLVLDYQRLQQLH 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ ++++ L KE+ D E+ + E++ LS+E +L ++LKV LLPSDP D R++MLE+
Sbjct: 61 AEHQQAQQLLKESKGDAELEALAQEELQQLSSEQEQLNQRLKVALLPSDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY+++++ W+ +S+SEAE GGFK +++ I+G+ V+S+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFKELILAIRGDAVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD V+V IDPKD++++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVDVQIDPKDLDISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKL + E + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLAKEEEEAAAAESSARRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L + L+G + + +++C +Q++ LEELA
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGKNFPLETVLNGQLSDLIEACTHADQQQKLEELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
9313]
gi|81576937|sp|Q7V518.1|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
9313]
Length = 365
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 265/360 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LIT+LE+A +++ L +LADP+V ++P + +A+ A L+ +V + + E
Sbjct: 1 MDSSTLITRLETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++ +E++ L +E+ D+ M + E++ L L +L + LLPSDP D R++MLE+
Sbjct: 61 QEWQETKQLLRESRGDDAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGG+EA +WAGDL RMY++Y ++ W +S++EA+ GGF+ +++ IKG+ V+S+L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP ++E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQIDPSELEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT++R+QLQN+ RA+++LRAKL E ++ E + + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLERQIAEANARESSTRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL NF L L G ++ + +C A EQ+ LEEL+
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLTGQLEELIGACIAEEQRHQLEELS 360
>gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 358
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 273/356 (76%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++++L+ ++++ L+ +LADP+V+++ + +++ ++++EVV + ++ +++L
Sbjct: 1 MMSRLDGIRRSYQALTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L ++ G+D +M EM E+K++ +L LEEK+KVLLLP DP DARN+MLE+RAG G
Sbjct: 61 AKELFQDAGDDPDMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA I+AGDL+ +Y+KY W+ LI SS + GG+K VV++IKG+ VYSKLK+E+G
Sbjct: 121 GSEANIFAGDLLDVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVAIMPE DEV++ IDPK+IE++T RSGGAGGQNVNKVE
Sbjct: 181 VHRVQRVPATESQGRVHTSTATVAIMPECDEVDIKIDPKEIEMSTMRSGGAGGQNVNKVE 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+DL HKPTGIRI CT+ER+QL+NK A+++L AKLY+++ +++ + R +R SQVGTG
Sbjct: 241 TAVDLLHKPTGIRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRGSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+KD+R +DHRL NF L FL G+I + S A +Q+E L+ L+E
Sbjct: 301 GRSEKIRTYNWKDSRCSDHRLGQNFPLAQFLSGDIGSMHDSMIAKDQEERLKGLSE 356
>gi|449016327|dbj|BAM79729.1| chloroplast peptide chain release factor RF-1 [Cyanidioschyzon
merolae strain 10D]
Length = 426
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/357 (53%), Positives = 265/357 (74%), Gaps = 4/357 (1%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P ++ KL+S + DL+ L+D V ++ E +L ++ A+L+ + Y ++K +
Sbjct: 52 DPGIVHKLQSTQAAYDDLTKSLSDTAVCADAGELARLMKARAKLEPICEAYGEWK----R 107
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
L+E+ A E DEE+ E+ SE++ +++L E EE+++ LLLP DP D +NIMLE+RA
Sbjct: 108 LQETIASLSELLEDEELRELARSEMQEATSKLEETEERIRFLLLPQDPNDEKNIMLEIRA 167
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA +W GDLV +Y +Y++ W L+S+S A+ GG+K ++EI G+ VYS+LK+
Sbjct: 168 GTGGDEASLWCGDLVNLYTRYAQSKKWSVKLVSASAADVGGYKECILEISGDNVYSRLKF 227
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
E+GVHRVQRVP TE GRVHTSTATVA+MP+ DE+EV IDPKD+E+ TARSGGAGGQNVN
Sbjct: 228 EAGVHRVQRVPATETMGRVHTSTATVAVMPQVDEIEVKIDPKDLEIQTARSGGAGGQNVN 287
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
KVETA+DL+HKP+GIR+FCTEER+Q +N+ RALQ+LRAKLYEI++ EQ+EKI R SQV
Sbjct: 288 KVETAVDLYHKPSGIRVFCTEERSQQKNRERALQILRAKLYEIQLNEQREKIEGLRRSQV 347
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
GTG+R+EKIRTYNYKD RVTDHRL NF L +FL G +D + + +Q+ +E +
Sbjct: 348 GTGSRSEKIRTYNYKDARVTDHRLSQNFSLENFLQGKLDEIIDALIFEDQQRRIESM 404
>gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 206/226 (91%)
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
VRMYQ+Y E N+WK +S SEAEKGGFKT VME+KG +VYSKLK+ESGVHRVQRVPQTE
Sbjct: 6 VRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTE 65
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
GRVHTSTATVAIMPEADEV+VVIDPKDIEL ARSGGAGGQNVNKVETAIDL HKPTG
Sbjct: 66 TMGRVHTSTATVAIMPEADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPTG 125
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
IRIFCTEE++QLQNK RA QLLRAKLYEIK+REQQE IRTQRL QVGTGAR+EKIRTYNY
Sbjct: 126 IRIFCTEEKSQLQNKERAFQLLRAKLYEIKLREQQESIRTQRLLQVGTGARSEKIRTYNY 185
Query: 365 KDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
KDNRVTDHRLKMNF L+SFL G+I++A+QSCAA+EQKELLEE+A S
Sbjct: 186 KDNRVTDHRLKMNFILSSFLLGDIESAIQSCAALEQKELLEEMATS 231
>gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917]
gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917]
Length = 365
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/360 (52%), Positives = 265/360 (73%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI++LE+A+ ++++L +LADP+V ++P + +A+ + L+ +V + + E + ++
Sbjct: 6 LISRLEAASTSFRNLERQLADPDVAADPKRLETIARERSRLEPLVQDFASLQQVESERDQ 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL +E+ D M E+ E+ L L E+L + LLP+DP D R++MLE+RAGAG
Sbjct: 66 AKALLRESREDPAMQELAQQELDQLEVRRSALLEQLTLALLPTDPRDGRSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA +WAGDL RMY++Y + W +S++ A+ GG++ +++ +KG V+SKLK+E+G
Sbjct: 126 GDEACLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSVKGEAVFSKLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP ++E++TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIDPTELEISTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKLYE ++ E + + R +QVGTG
Sbjct: 246 TAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERQLAEANARESSARRAQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
R+EKIRTYN KDNRVTDHRL NF L L+G +D + +C A EQ+ LE L+ A
Sbjct: 306 DRSEKIRTYNAKDNRVTDHRLGRNFGLDPVLEGQLDEVIGACIAEEQRAKLEALSNEADA 365
>gi|194705206|gb|ACF86687.1| unknown [Zea mays]
gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays]
gi|413920291|gb|AFW60223.1| hypothetical protein ZEAMMB73_878070 [Zea mays]
gi|413920292|gb|AFW60224.1| hypothetical protein ZEAMMB73_878070 [Zea mays]
Length = 230
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/227 (81%), Positives = 206/227 (90%)
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQ 246
MYQ+Y E+N+WK +S SEAE GG+KT VME+KG +VYSKLK+ESGVHRVQRVP TEA
Sbjct: 1 MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60
Query: 247 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 306
GRVHTSTATVAIMPEADEV+VVIDPKDIEL TARSGGAGGQNVNKVETA+DL HKPTGIR
Sbjct: 61 GRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGIR 120
Query: 307 IFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKD 366
IFCTEER+QLQN+ RA QLLRAKLYEIK+REQQE +R QR QVGTGAR+EKIRTYNYKD
Sbjct: 121 IFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESLRNQRKLQVGTGARSEKIRTYNYKD 180
Query: 367 NRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
NRVTDHRLKMNFELTSFL G+I++A+QSCA MEQ+ELLEE+A SVGA
Sbjct: 181 NRVTDHRLKMNFELTSFLLGDIESAIQSCATMEQQELLEEMASSVGA 227
>gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902]
gi|119361629|sp|Q3AW64.1|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp.
CC9902]
Length = 365
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 265/361 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L ++L++A +++ L +LADP+V ++P + +A+ + L+ +V + + E
Sbjct: 1 MDASTLTSRLQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++ ++R L +E+ +D M E+ E+ L + L ++L + LLP DP D R++MLE+
Sbjct: 61 QEQADARELLRESRSDAAMQELAQDELSELEAQHTALLQRLTLALLPRDPRDDRSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y ++ W +S +EA+ GG++ +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGTSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVELDPKDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT++R+QLQN+ RAL++LRAKL E ++ E+ + R S
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSHRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L G +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLQGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 E 409
E
Sbjct: 361 E 361
>gi|397627675|gb|EJK68569.1| hypothetical protein THAOC_10240 [Thalassiosira oceanica]
Length = 1113
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/397 (47%), Positives = 279/397 (70%), Gaps = 9/397 (2%)
Query: 15 PLNHSPQRQRFGGSQSKRNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLAD 74
PL S ++R+GG + RT + + + +L+ ++++ L+ +LAD
Sbjct: 25 PLGSSVCQERWGGH---------GRTLRTSSALSALDDAMKNRLDGIRRSYQALTERLAD 75
Query: 75 PEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIASE 134
P+V+ + + +++ + ++ +EVV + ++ + +++LE ++ L +E G+D EM EM SE
Sbjct: 76 PDVIGDSNLLRQVMKDRSQSEEVVLEFERYCELDEELEGAQELFQEAGDDAEMREMARSE 135
Query: 135 IKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQ 194
IK++ EL LE K+++LLLP DP D RN MLE+RAG GG EA I+AGDL +Y+K+ +
Sbjct: 136 IKTIEAELERLESKIQILLLPKDPNDDRNCMLEIRAGTGGSEANIFAGDLYDVYRKFMQT 195
Query: 195 NSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTA 254
W+ L+ SS + GG+K +V+E+KG+ VYSKLK+E+GVHRVQRVP TE QGRVHTSTA
Sbjct: 196 EGWQVKLMDSSPGDDGGYKNIVVEVKGDSVYSKLKWEAGVHRVQRVPATETQGRVHTSTA 255
Query: 255 TVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERT 314
TVAIMPE DEV++ ID KDIE++T RSGGAGGQNVNKVETA+DL HKPTGIRI CT+ER+
Sbjct: 256 TVAIMPECDEVDIKIDQKDIEMSTMRSGGAGGQNVNKVETAVDLLHKPTGIRIKCTQERS 315
Query: 315 QLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRL 374
QL+NK A+++L +KLY+++ ++ + R +R Q+GTG R+EKIRTYN+KD+RV+DHRL
Sbjct: 316 QLKNKELAMKMLMSKLYDMENEKRDAEERARRGDQIGTGGRSEKIRTYNWKDSRVSDHRL 375
Query: 375 KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
N+ L FL G + + A +Q+ L +L+E +
Sbjct: 376 GQNYPLQGFLGGGVGQIIDGLIAKDQEAKLRQLSEDL 412
>gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107]
gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107]
Length = 365
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 266/361 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L ++L++A +++ L +LADP+V ++P + +A+ + L+ +V + + E
Sbjct: 1 MDASTLTSRLQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++ ++R L +E+ +D M E+ +E+ L + L ++L + LLP DP D R++MLE+
Sbjct: 61 QEQVDARELLRESRSDAAMQELAQNELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y ++ W +S +EA+ GG++ +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT++R+QLQN+ RAL++LRAKL E ++ E+ + R S
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSDRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L G +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLQGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 E 409
E
Sbjct: 361 E 361
>gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 366
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/354 (51%), Positives = 264/354 (74%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
++L+ ++++ L+ +LADP+V+++ + +++ + ++ +E V + ++ E +LE ++
Sbjct: 9 SRLDGIRRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAFDEYCQLETELEGAQ 68
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
L +E G+D EM EM SE+K + L ELE +K+LLLP DP D RN MLE+RAG GG
Sbjct: 69 ELFQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGTGGS 128
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA I+AGDL+ +Y+K+ W+ +++ SS + GG+K VV+E+KG+ VYSKLK+E+GVH
Sbjct: 129 EANIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEAGVH 188
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA 295
RVQRVP TE QGRVHTSTATVAIMPE DEV+V IDPKDIE++T RSGGAGGQNVNKVETA
Sbjct: 189 RVQRVPATETQGRVHTSTATVAIMPECDEVDVKIDPKDIEMSTMRSGGAGGQNVNKVETA 248
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+DL HKPTGIRI CT+ER+QL+NK A+++L A+LY+I+ +++ + R +R Q+GTG R
Sbjct: 249 VDLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDIENEKREAEERERRGVQIGTGGR 308
Query: 356 AEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
+EKIRTYN+KD+RV+DHRL NF L +FL G++ + +Q+ L +L+E
Sbjct: 309 SEKIRTYNWKDSRVSDHRLGQNFPLQNFLSGDVGPIIDGLIIKDQEAKLRQLSE 362
>gi|388492438|gb|AFK34285.1| unknown [Lotus japonicus]
Length = 200
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 177/199 (88%), Positives = 185/199 (92%)
Query: 217 MEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIEL 276
MEIKGN VYSKLKYESGVHRVQRVP TE QGRVHTSTATVAIMPE DEVEV IDPKDIEL
Sbjct: 1 MEIKGNCVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEVDEVEVEIDPKDIEL 60
Query: 277 TTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVR 336
TTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL+NK RALQLLRAKLYEIK+R
Sbjct: 61 TTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLRNKHRALQLLRAKLYEIKLR 120
Query: 337 EQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCA 396
EQQE IR +R SQ+GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDG+I+NAVQSC
Sbjct: 121 EQQESIRNERKSQIGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIENAVQSCV 180
Query: 397 AMEQKELLEELAESVGAPS 415
EQK+LLEELAES AP+
Sbjct: 181 TTEQKQLLEELAESANAPA 199
>gi|302390589|ref|YP_003826410.1| peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani
DSM 16646]
gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
[Thermosediminibacter oceani DSM 16646]
Length = 364
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 174/354 (49%), Positives = 256/354 (72%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + +++L+ ++++P V++ E++KLA+ A L+E+VS YR++K +++E
Sbjct: 1 MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L KE ND EM E I E+++L EL+E+LK+LLLP DP D +++++E+RAGAG
Sbjct: 61 SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E+ WK L+SSS E GGFK V+ E+ G YS+LKYESG
Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PEA+EV+V I+P ++ + RS G GGQ+VN +
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEAEEVDVEINPNELRIDVFRSSGHGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+QL+N+ +A+++LRAKL E+K REQ EKI R SQVGTG
Sbjct: 241 SAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKLLEMKQREQNEKIAQSRRSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ RVTDHR+ +L + LDG +D ++ A +Q L E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRIGFTTHQLENILDGELDELIERLIAEDQARRLAE 354
>gi|337287822|ref|YP_004627294.1| Peptide chain release factor 1 [Thermodesulfobacterium sp. OPB45]
gi|334901560|gb|AEH22366.1| Peptide chain release factor 1 [Thermodesulfobacterium geofontis
OPF15]
Length = 368
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/355 (52%), Positives = 260/355 (73%), Gaps = 2/355 (0%)
Query: 53 YLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
+ + KL+ K ++++S KL+DP ++SNP Y KLA+ AEL E+V TYR++K Q++
Sbjct: 6 FYLKKLDVLEKNFEEISSKLSDPSIISNPELYAKLAKEHAELLEIVETYREYKKILNQIK 65
Query: 113 ESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
E++ L E +DEE+ E+ E+K L N L ELE+KL +LLLP DP D +N++LE+RAGA
Sbjct: 66 ENKQLI-EVESDEELIELAKEELKELENRLEELEKKLPILLLPKDPNDEKNVILEIRAGA 124
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GG+EA ++A DL+RMYQ+Y+E+ WK ++ ++E GGFK V+ +I+G YS+LKYES
Sbjct: 125 GGEEAALFAADLLRMYQRYAEKKGWKFDILDANETGLGGFKEVIAKIEGKGAYSRLKYES 184
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE+ GR+HTSTATVA++PE DEV V I P+D+++ T R+ G GGQ+VNK
Sbjct: 185 GVHRVQRVPITESSGRIHTSTATVAVLPEVDEVTVEIRPEDLKIETMRASGHGGQHVNKT 244
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
E+A+ + H PTGI + C ER+Q QNK+ AL++LRAKLYE+ +REQ EKI+T+R SQVGT
Sbjct: 245 ESAVRITHIPTGITVTCQNERSQHQNKATALKILRAKLYELALREQNEKIQTERKSQVGT 304
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R EKIRTYN+ NRVTDHR+ + + L LDG +D + + A + + L+E
Sbjct: 305 GERCEKIRTYNFPQNRVTDHRIGLTVYNLPEVLDGELDEFIDALIAHYRVKALKE 359
>gi|406982081|gb|EKE03447.1| hypothetical protein ACD_20C00203G0020 [uncultured bacterium]
Length = 362
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/360 (47%), Positives = 257/360 (71%), Gaps = 1/360 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ K++ KT+ +L KL+DP + + +E++KL+++ +++ V T+ +++ E
Sbjct: 4 MLEKIKDIEKTYTELGEKLSDPATIQDYNEFKKLSKTRKSMEDTVETFHCWQEAVASKNE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + ND +M + +EI++ ++ E+K+K+LLLP DP D ++IMLE+R AG
Sbjct: 64 ASQLIR-GENDADMRTFLQNEIETAEAKITACEDKMKLLLLPKDPNDEKDIMLEIRGSAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+A DL+RMY +Y+E+ WK ++ SE E GG V+ I+G+ VYS+LKYESG
Sbjct: 123 GDEANIFAADLMRMYLRYAEKQGWKTQVLGVSEGELGGISEAVISIQGDGVYSRLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGR+HTSTATVA+MPE D+VE+ I D+E+TTAR+GGAGGQNVNKVE
Sbjct: 183 VHRVQRVPVTESQGRIHTSTATVAVMPEVDDVEINISMNDLEITTARAGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + HKP+GI + CTEER+QL+NK A+Q+L+ KLY++++++Q ++I R SQVGTG
Sbjct: 243 TAVRIVHKPSGIMVHCTEERSQLKNKEIAMQILKTKLYDMELQKQTKEITDLRRSQVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
R+E+IRTYN+ R TDHR+ N + + ++G +D ++ +QK LE+LA+SV A
Sbjct: 303 DRSERIRTYNFPQGRCTDHRINHNLNVKTVIEGELDELIEHLLMYDQKVKLEKLADSVNA 362
>gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
Length = 357
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 258/356 (72%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ +++LS+K++DP V++N +E++KL + AEL+ +V+ YR++K+ +++LE
Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E ND +M EMI EIK+L ++ EE+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKELLSEE-NDRDMKEMIQEEIKTLEENIVRDEEELKILLLPKDPNDDKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E++ WK L+S++E + GGFK VV ++G+ YSK+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ IDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +AL++L+A+LYE E+ I R SQVGTG
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAERAASISADRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVT+HR+ + ++L +FLDG+++ + + EQ E ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALITAEQAEKMKAMG 355
>gi|317121004|ref|YP_004101007.1| peptide chain release factor 1 (bRF-1) [Thermaerobacter marianensis
DSM 12885]
gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
marianensis DSM 12885]
Length = 381
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 168/343 (48%), Positives = 249/343 (72%), Gaps = 2/343 (0%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGND 124
+ L +LADP V ++P +Q LAQ AEL+ +V YR++++ LE +RAL +E +
Sbjct: 37 FDQLERELADPAVAADPRRWQPLAQERAELEPLVDAYRRWREAGADLEAARALLRETDDA 96
Query: 125 EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
+E A + A E++ L E LE L+ LLLP DP D R++++E+RAG GG+EA ++AGDL
Sbjct: 97 DEHAYLTA-EVERLEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGDL 155
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
RMYQ+Y+E+ W+ +++++E++ GGFK VV + G +S+LK+ESGVHRVQRVP TE
Sbjct: 156 FRMYQRYAERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQRVPVTE 215
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
A GR+HTSTATVA++PEA+EVEV IDP D+E+ T + G GGQ+VNK E+A+ + HKPTG
Sbjct: 216 AAGRIHTSTATVAVLPEAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPTG 275
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
I + C +ER+Q +N++RA+++LRA+L + R QQE++ QR SQVGTG R+EKIRTYN+
Sbjct: 276 IVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQVGTGERSEKIRTYNF 335
Query: 365 KDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
++NRVTDHR+ + + L +DG++D + + AA +++ L E
Sbjct: 336 RENRVTDHRIGLTLYRLQEIMDGDLDELLDALAAHDEQVRLGE 378
>gi|416348416|ref|ZP_11680318.1| peptide chain release factor 1 [Clostridium botulinum C str.
Stockholm]
gi|338196850|gb|EGO89028.1| peptide chain release factor 1 [Clostridium botulinum C str.
Stockholm]
Length = 350
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 255/350 (72%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ +++LS+K++DP V++N +E++KL + AEL+ +V+ YR++K+ +++LE
Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E ND +M EMI EIK+L ++ EE+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKELLSEE-NDRDMKEMIQEEIKTLEENIVRDEEELKILLLPKDPNDDKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E++ WK L+S++E + GGFK VV ++G+ YSK+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ IDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +AL++L+A+LYE E+ I R SQVGTG
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAERAASISADRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYNY RVT+HR+ + ++L +FLDG+++ + + EQ E
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALITAEQAE 349
>gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
Length = 357
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 257/356 (72%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ +++LS+K++DP V++N +E++KL + AEL+ +V+ YR++K+ +++L
Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E ND +M EMI EIK+L ++ EE+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKELLSEE-NDRDMKEMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E++ WK L+S++E + GGFK VV ++G+ YSK+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ IDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +AL++L+A+LYE E+ I R SQVGTG
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAERAASISADRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVT+HR+ + ++L +FLDG+++ + + EQ E ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALITAEQAEKMKAMG 355
>gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 360
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 250/354 (70%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPE+++ E++KL + ++L E V T+R +K L+E
Sbjct: 2 LVDKLQVIEDKFMDLEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLDE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L + ELEEKL++LLLP DP D +NI++E+R GAG
Sbjct: 62 AMEVIEDKSLDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++E E GGFK VV ++G VYSK+K+ESG
Sbjct: 122 GDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTST TVA++PE ++V++ ++ KD+++ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C ++R+QL+NK +A+++LRAKL + +E Q + R SQVGTG
Sbjct: 242 SAVRITHLPTGIVVACQDQRSQLKNKDKAMRVLRAKLQDQAEQEAQASMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLDAVLNGDLDEIIQALNAADQAAKMQE 355
>gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT]
gi|166223551|sp|A0Q312.1|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT]
Length = 357
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 258/356 (72%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE +++LS+K++DP V++N +E++KL + AEL+ +V+ YR++K +++LE
Sbjct: 1 MLDKLEFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E D++M EMI EIK+L +++ +E+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKEMLSEE-TDKDMKEMIQEEIKTLEESIVKDQEELKILLLPKDPNDDKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E++ WK L+S++E + GGFK VV ++G+ YSK+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ IDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +A+++L+A+LYE E+ I R SQVGTG
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERSASISADRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVT+HR+ + ++L +FLDG+++ + + EQ E ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQAEKMKAMG 355
>gi|401679720|ref|ZP_10811644.1| peptide chain release factor 1 [Veillonella sp. ACP1]
gi|400218847|gb|EJO49718.1| peptide chain release factor 1 [Veillonella sp. ACP1]
Length = 360
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 248/354 (70%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPEV++ E++KL + A+L E V +R++K ++E
Sbjct: 2 LVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L + ELEEKL++LLLP DP D +NI++E+R GAG
Sbjct: 62 AMEVIEDKSMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++E E GGFK VV + G VYSK+K+ESG
Sbjct: 122 GDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTST TVA++PE ++V++ I+ KD+++ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEINDKDLKIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C ++R+QLQN+ +A+++LRAKL + +E + R SQVGTG
Sbjct: 242 SAVRITHLPTGIVVACQDQRSQLQNREKAMRVLRAKLQDKAEQEATASMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQE 355
>gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str.
Eklund]
gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str.
Eklund]
Length = 357
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 257/356 (72%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ +++LS+K++DP V++N +E++KL + +EL+ +V+ YR++K +++LE
Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E D++M EMI EIK+L ++ EE+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKEMLSEE-TDKDMKEMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E++ WK L+S++E + GGFK VV ++G+ YSK+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ IDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +A+++L+A+LYE E+ I R SQVGTG
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERSASISADRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVT+HR+ + ++L +FLDG+++ + + EQ E ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQAEKMKAMG 355
>gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica
ACS-134-V-Col7a]
gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
gi|429759622|ref|ZP_19292120.1| peptide chain release factor 1 [Veillonella atypica KON]
gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica
ACS-134-V-Col7a]
gi|429179583|gb|EKY20830.1| peptide chain release factor 1 [Veillonella atypica KON]
Length = 360
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 248/354 (70%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPEV++ E++KL + A+L E V +R++K ++E
Sbjct: 2 LVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L + ELEEKL++LLLP DP D +NI++E+R GAG
Sbjct: 62 AMEVIEDKTMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++E E GGFK VV + G VYSK+K+ESG
Sbjct: 122 GDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTST TVA++PE ++V++ I+ KD+++ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEINDKDLKIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C ++R+QLQN+ +A+++LRAKL + +E + R SQVGTG
Sbjct: 242 SAVRITHLPTGIVVACQDQRSQLQNREKAMRVLRAKLQDKAEQEATASMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQE 355
>gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
Length = 360
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 248/354 (70%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPEV++ E++KL + A+L E V T+R +K ++E
Sbjct: 2 LVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L + ELEEKL+VLLLP DP D +NI++E+R GAG
Sbjct: 62 AMEVIEDKSMDEEFREMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++E E GGFK V+ + G VYSK+K+ESG
Sbjct: 122 GDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTST TVA++PE ++V++ ++ KD+++ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + C ++R+QLQN+ +A+++LRAKL + +E + R SQVGTG
Sbjct: 242 SAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQE 355
>gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
gi|416999011|ref|ZP_11939680.1| peptide chain release factor 1 [Veillonella parvula
ACS-068-V-Sch12]
gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
gi|333977164|gb|EGL78023.1| peptide chain release factor 1 [Veillonella parvula
ACS-068-V-Sch12]
Length = 360
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 248/354 (70%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPEV++ E++KL + A+L E V T+R +K ++E
Sbjct: 2 LVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L + ELEEKL+VLLLP DP D +NI++E+R GAG
Sbjct: 62 AMEVIEDKSMDEEFREMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++E E GGFK V+ + G VYSK+K+ESG
Sbjct: 122 GDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTST TVA++PE ++V++ ++ KD+++ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + C ++R+QLQN+ +A+++LRAKL + +E + R SQVGTG
Sbjct: 242 SAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQE 355
>gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
Length = 360
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 248/354 (70%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPEV++ E++KL + A+L E V T+R +K ++E
Sbjct: 2 LVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGIDE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L + ELEEKL++LLLP DP D +NI++E+R GAG
Sbjct: 62 AMEVIEDKSMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++E E GGFK V+ + G VYSK+K+ESG
Sbjct: 122 GDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTST TVA++PE ++V++ ++ KD+++ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + C ++R+QLQN+ +A+++LRAKL + +E + R SQVGTG
Sbjct: 242 SAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQE 355
>gi|427412428|ref|ZP_18902620.1| peptide chain release factor 1 [Veillonella ratti ACS-216-V-Col6b]
gi|425716235|gb|EKU79219.1| peptide chain release factor 1 [Veillonella ratti ACS-216-V-Col6b]
Length = 361
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 247/354 (69%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DPEV++ E+QKL + A L E V+T+R++K L+E
Sbjct: 3 LVDKLQVIEDKFMDLEQRISDPEVIARQQEWQKLTRQHASLTETVNTFREYKQVLAGLDE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ DEE EM E+K L LEE+L +LLLP DP D +N+++E+R GAG
Sbjct: 63 ALEVVEDKSLDEEFREMAQEELKELKERKEVLEEQLHILLLPKDPNDEKNVIVEIRGGAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E W+C +I ++ E GGFK VV + GN YSKLK+ESG
Sbjct: 123 GDEAALFAGDLFRMYTKYAEAQGWRCEIIDANAPELGGFKEVVFSVDGNSAYSKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA++PEA++V++ I+ KD+++ T + GAGGQ+VN+ E
Sbjct: 183 VHRVQRVPETESSGRIHTSTVTVAVLPEAEDVDIEINDKDLQIDTYCASGAGGQHVNRTE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+QL+NK +A+++LRAKL + +E + R SQVGTG
Sbjct: 243 SAVRITHKPTGIVVACQDERSQLKNKDKAMRVLRAKLQDKAEQEAAASVAADRKSQVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A +Q ++E
Sbjct: 303 DRSERIRTYNYPQGRVTDHRINLTLYKLDAVLNGDLDELIQALIAADQAAKMQE 356
>gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
Re1]
gi|438003343|ref|YP_007273086.1| Peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
Re1]
gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
Re1]
gi|432180137|emb|CCP27110.1| Peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
Re1]
Length = 356
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/349 (47%), Positives = 250/349 (71%), Gaps = 3/349 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE K + +L+ K+ADPE+++ E+ L + A L+E+V+ +R++K+ KQLEE
Sbjct: 1 MIEKLEIIEKKYDELTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L ++ D EM ++I SE+++L + +L+E+L++LLLP DP D RN+++E+RAG G
Sbjct: 61 NSELLEDAAGDIEMEQLIKSELEALEEKKSKLQEQLRILLLPQDPNDDRNVIMEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK +I S+ E GGFK V+ EI G YS+LKYESG
Sbjct: 121 GDEAALFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTS ATVA++PEA EV++ I+P D+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPSTEAGGRIHTSAATVAVLPEAHEVDIEINPDDLRIDIYRASGHGGQGVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEK-IRTQRLSQVGT 352
+A+ + H PTG+ + C +ER+QL+NK +A+++LRA+L E KV+E+QE+ I R SQVG+
Sbjct: 241 SAVRITHIPTGLVVTCQDERSQLKNKDKAMKVLRARLLE-KVQEEQEREIAQNRRSQVGS 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQ 400
G R+E+IRTYN+ R+TDHR+ + +LT+ L G +D + + A +Q
Sbjct: 300 GDRSERIRTYNFPQGRITDHRINLTTHQLTNVLQGELDELIDALVAEDQ 348
>gi|403387543|ref|ZP_10929600.1| peptide chain release factor 1 [Clostridium sp. JC122]
Length = 359
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/361 (46%), Positives = 260/361 (72%), Gaps = 4/361 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE + +LS K++DP V++N E+QKL + ++++ +V+ YR++K+ LEE
Sbjct: 1 MLERLEFIENKYDELSNKISDPSVMANQKEWQKLCKEHSDMEIMVTKYREYKNALSSLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIEL-EEKLKVLLLPSDPLDARNIMLEVRAGA 172
++A+ E +D+EM EMI +IKSL NE+IE +E+L++LLLP DP D +N+ +E+R GA
Sbjct: 61 NKAMLIEE-SDKEMKEMIQEDIKSL-NEIIESSQEELRILLLPKDPNDDKNVFIEIRGGA 118
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA ++A +L RMY +Y+E+N WK ++S++E + GGFK VV +KG++ YSKLKYE
Sbjct: 119 GGDEAALFAANLFRMYTRYAERNRWKVEVMSANETDIGGFKEVVFMVKGDKAYSKLKYEI 178
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE+ GR+HTSTAT+A++PE D+V++ I+ D+++ R+ G GGQ VN
Sbjct: 179 GVHRVQRVPDTESSGRIHTSTATIAVLPEVDDVDIEINANDLKIDVFRASGNGGQCVNTT 238
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C +E++QL+NK +AL++LRA+LYE E+ I R +QVGT
Sbjct: 239 DSAVRMTHLPTGLVVSCQDEKSQLKNKEKALKILRARLYEQAEAERSAGIAEDRRNQVGT 298
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
G R+E+IRTYNY RVTDHR+ + ++L SFLDG+ID + + +Q E ++ + ++
Sbjct: 299 GDRSERIRTYNYPQGRVTDHRIGLTLYKLESFLDGDIDEMLNALITADQAEKMKSMGNNI 358
Query: 412 G 412
G
Sbjct: 359 G 359
>gi|407472714|ref|YP_006787114.1| peptide chain release factor 1 [Clostridium acidurici 9a]
gi|407049222|gb|AFS77267.1| peptide chain release factor 1 [Clostridium acidurici 9a]
Length = 355
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 254/355 (71%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE K +++L+ K+ADPE++SN SE+QK + +++++VV Y+++K C +QLEE
Sbjct: 1 MLDKLEFIEKRYQELNEKIADPEIISNISEWQKYVKEHSDIEDVVLKYKEYKACLEQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ DE+ E++ E+ L ++ + E+LKVLL+P DP D +N+++E+RAGAG
Sbjct: 61 NKEMLKDK-LDEDFRELVKLEVDELEEKIEVISEELKVLLIPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE GI+AGDL+RMY +Y+E+ WK ++S + GG K IKG YS+LKYESG
Sbjct: 120 GDEGGIFAGDLLRMYTRYAERQGWKTEMMSLHDQGVGGVKEASFLIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEAD+V++VI+ D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPATESSGRIHTSTATVAVLPEADDVDIVINQNDVRVDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++QL+NK +A ++L+A+LY+ + EQ +I +R SQVGTG
Sbjct: 240 SAVRLTHTPTGIVVSCQDEKSQLKNKEKAFKILKARLYDKMIEEQNAEIAQERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+ KIRTYN+ R+TDHR+ + ++L +FLDG+I+ + S Q E L+++
Sbjct: 300 DRSAKIRTYNFPQGRITDHRVNLTVYKLDAFLDGDINEMLDSLITTAQAEKLQQV 354
>gi|342732944|ref|YP_004771783.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456312|ref|YP_005668909.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960276|ref|ZP_12602903.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-1]
gi|417962249|ref|ZP_12604501.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-2]
gi|417963914|ref|ZP_12605757.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-3]
gi|417964957|ref|ZP_12606590.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-4]
gi|417967756|ref|ZP_12608821.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-co]
gi|418015648|ref|ZP_12655213.1| peptide chain release factor RF1 [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373195|ref|ZP_12965286.1| Peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342330399|dbj|BAK57041.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505983|gb|EGX28277.1| peptide chain release factor RF1 [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984657|dbj|BAK80333.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330785|gb|EIA21960.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-2]
gi|380331373|gb|EIA22428.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-3]
gi|380331379|gb|EIA22433.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-1]
gi|380339458|gb|EIA28195.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-4]
gi|380340794|gb|EIA29344.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-co]
gi|380341584|gb|EIA30058.1| Peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 358
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 251/359 (69%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+ + +++LS+K++DPEV+SN E+QKL + +EL+ + YR++K +E
Sbjct: 1 MLQRLDFLEQKYEELSIKISDPEVMSNQKEWQKLCKDHSELEVITLKYREYKKVLDDIEY 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + ++ D+E E+ EIK L N I +E +LK+LLLP DP D +N+ +E+RAG G
Sbjct: 61 SKEML-DDEEDKEFRELAQEEIKELQNNKITIENELKILLLPKDPNDEKNVFVEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY KY E WK +IS ++ + GGFK VV IKG+ YSKLKYESG
Sbjct: 120 GDEAALFAANLFRMYSKYVENKRWKIEMISVNDTDIGGFKEVVFMIKGSGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTS ATVA++PE D+V+V I+ D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPDTEASGRIHTSAATVAVLPEVDDVDVEINQNDLRIDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI I C +E++QL+NK +A++LLRA+L+EI +E+ + I R SQVG+G
Sbjct: 240 SAVRITHIPSGIVISCQDEKSQLKNKEKAMKLLRARLFEIAEQERLKLIAEDRKSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+E+IRTYNY RVTDHR+ + ++L SF+DG ID ++ +Q E ++++ ES+
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTIYKLDSFMDGYIDEIIEGLITEDQSEKMKQMGESI 358
>gi|347542961|ref|YP_004857598.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985997|dbj|BAK81672.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 357
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 250/359 (69%), Gaps = 3/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+ + +++L +K++DPEV+SN E+QKL + +EL+ + YR++K + +E
Sbjct: 1 MLQRLDFLEQKYEELCIKISDPEVMSNQKEWQKLCRDHSELEVITLKYREYKKVLEDIEY 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L E D+E E+ E+K L N I +E +LK+LLLP DP D +N+ +E+RAG G
Sbjct: 61 NKSLLDEE--DKEFRELAQEELKVLQNIKINIENELKILLLPKDPNDGKNVFVEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY KY E WK +IS ++ + GGFK VV IKGN YSKLKYESG
Sbjct: 119 GDEAALFASNLFRMYSKYVENKRWKIEMISVNDTDIGGFKEVVFMIKGNGAYSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTS ATVA++PE D+V+V I+ D+ + RS G GGQ+VN +
Sbjct: 179 VHRVQRVPDTEASGRIHTSAATVAVLPEVDDVDVDINQNDLRIDVFRSSGNGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI I C +E++QL+NK +A++LLRA+L+EI +E+ + I R SQVG+G
Sbjct: 239 SAVRITHIPSGIVISCQDEKSQLKNKEKAMKLLRARLFEIAEQERLKLIAEDRKSQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+E+IRTYNY RVTDHR+ + ++L SF+DG ID ++ +Q E ++++ E +
Sbjct: 299 DRSERIRTYNYPQGRVTDHRIGLTIYKLDSFMDGYIDEIIEGLITQDQSEKMKQMGEGI 357
>gi|413920290|gb|AFW60222.1| hypothetical protein ZEAMMB73_878070 [Zea mays]
Length = 214
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 190/227 (83%), Gaps = 16/227 (7%)
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQ 246
MYQ+Y E+N+WK +S SEAE GG+KT VME+KG +VYSKLK+ESGVHRVQRVP TEA
Sbjct: 1 MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60
Query: 247 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 306
GRVHTSTATVAIMPEADEV+VVIDPKDIEL TARSGGAGGQNVNKVETA+DL HKPTGIR
Sbjct: 61 GRVHTSTATVAIMPEADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGIR 120
Query: 307 IFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKD 366
IFCTEER+QLQN+ RA QLLRAKLYEIK+REQQE +R QR Q D
Sbjct: 121 IFCTEERSQLQNRERAFQLLRAKLYEIKLREQQESLRNQRKLQ----------------D 164
Query: 367 NRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
NRVTDHRLKMNFELTSFL G+I++A+QSCA MEQ+ELLEE+A SVGA
Sbjct: 165 NRVTDHRLKMNFELTSFLLGDIESAIQSCATMEQQELLEEMASSVGA 211
>gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528]
gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM
13528]
Length = 357
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 251/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS+K++DP+V+++ E+QKL + AEL+E+V+ YR++K +++LE+
Sbjct: 1 MLERLNFIENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + KE D EM EM EIK L+ + E E L+VLLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKEMLKEE-TDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +W +S + + GGFK +V +KG YS+LKYESG
Sbjct: 120 GEEAALFAANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PE D+V+VVI+P DI + R+ G GGQ VN +
Sbjct: 180 THRVQRVPDTESSGRIHTSTATVAVLPEVDDVDVVINPNDIRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK + +++L+++LYE +E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKGMKVLKSRLYERAEKERSASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVTDHR+ + ++L SFLDGNID + + +Q E ++E+
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALITADQAEKMKEMG 355
>gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101]
gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str.
JGS1987]
gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
3626]
gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
F4969]
gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str.
JGS1495]
gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str.
JGS1721]
gi|422346868|ref|ZP_16427782.1| peptide chain release factor 1 [Clostridium perfringens WAL-14572]
gi|422875116|ref|ZP_16921601.1| peptide chain release factor 1 [Clostridium perfringens F262]
gi|20139327|sp|Q8XIB9.1|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361525|sp|Q0TNB0.1|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361526|sp|Q0SQY1.1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101]
gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str.
JGS1495]
gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str.
JGS1987]
gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
3626]
gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
F4969]
gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str.
JGS1721]
gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
gi|373225701|gb|EHP48032.1| peptide chain release factor 1 [Clostridium perfringens WAL-14572]
gi|380303914|gb|EIA16208.1| peptide chain release factor 1 [Clostridium perfringens F262]
Length = 360
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 255/358 (71%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L + +LSVK++DP +++N E++KL + A+L+ +V+ Y+++K+ ++LE
Sbjct: 2 ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E +D+EM EMI SEIK L+ ELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSEE-SDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY KY+E+N WK L+S++E + GGFK VV IKG YSKLKYESG
Sbjct: 121 GDEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PE D+VE+ I+ KDI++ R+ G GGQ VN +
Sbjct: 181 AHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LRA+L+E E+ I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLFEQAEAERLAGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ M ++L SFL+G+ID + + +Q + ++ + +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQAQKMKAMGNT 358
>gi|410465614|ref|ZP_11318843.1| peptide chain release factor 1 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981343|gb|EKO37925.1| peptide chain release factor 1 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 357
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 254/358 (70%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + ++DL +L+ P+VVS+ ++KL+++ ++L +VV+ +R++K + LE+
Sbjct: 1 MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ +A++ D E+ E+ +E K+L +ELE +LKVLLLP DP+D +NI+LE+RAG G
Sbjct: 61 NQEMAQDP--DPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++S SE GGFK V+ I G++VYS+LKYESG
Sbjct: 119 GDEAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV+V IDP ++ + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++Q +NK++AL++LR++L +I+ +Q+ + R SQVGTG
Sbjct: 239 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQDKQRAEQEAARRSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ RVTDHR+ + + L + L+G++D + Q E L+ A++
Sbjct: 299 DRSERIRTYNFPQGRVTDHRINLTLYRLDAVLEGDLDELCGALIGHYQAEALKAQADA 356
>gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
gi|238692166|sp|B3EE55.1|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
Length = 357
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 171/354 (48%), Positives = 242/354 (68%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + DL +LADP S+ + ++KL + ++L E+V + ++ KQLEE
Sbjct: 1 MFDKLQSIKEKHLDLEQQLADPSAASDQNRFRKLNKEYSDLKEIVHAFDRYSLARKQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L D +M E++ EI+ L +L ELE++LKVLLLP D D+RN+++E+RAG G
Sbjct: 61 SRELLGSE-KDPQMRELVQMEIEDLQEKLPELEQQLKVLLLPKDEADSRNVIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++A DL+RMYQ+Y+E+ WKC L+ +E+ GGF+ V +E+ G+ V++ +KYES
Sbjct: 120 GDEAALFAADLLRMYQRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+HTS A+VA++PEA+EV+V I D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H PTGI C EER+QLQNK RA+ +LR KLY+I++ EQQ++ R S V T
Sbjct: 240 ETAVRITHLPTGIVAACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADLRRSMVST 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+ KIRTYNY +RVTDHR+ + L + G I + +++ +Q L+
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGEIGDVIEALKLHDQTARLQ 353
>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 357
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 255/356 (71%), Gaps = 3/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++D+ ++ADPE+ +N E Q L++ +EL VV +R+++ + LEE
Sbjct: 3 FLKKLEEIESAFQDIESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYRKVMRSLEE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L +++ DEEM ++ E++ LS+ L LE+ LKVLLLP DP D +N+++E+RAGAG
Sbjct: 63 AQELLEQD--DEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+E+ W+ ++ +E GG+K VV +KG YSKLK+ESG
Sbjct: 121 GDEAALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PEA++V+V I P+D+++ T R+ GAGGQ VN +
Sbjct: 181 VHRVQRIPVTEASGRIHTSTATVAVLPEAEDVDVQIRPEDLKIDTYRASGAGGQYVNMTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+QL+N+++A+QLLRA+LY+ ++++QQ ++ +R QVGTG
Sbjct: 241 SAVRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQAQMAAERKGQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY NR+TDHR+ ++L LDG++ +++ +Q E L+ LA
Sbjct: 301 DRSERIRTYNYPQNRLTDHRIGFTLYKLDQVLDGDLYELIEALRVADQAEKLKTLA 356
>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
gi|259585220|sp|C4XIQ1.1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
Length = 357
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 254/358 (70%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + ++DL +L+ P+VVS+ ++KL+++ ++L +VV+ +R++K + LE+
Sbjct: 1 MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ +A++ D E+ E+ +E K+L +ELE +LKVLLLP DP+D +NI+LE+RAG G
Sbjct: 61 NQEMAQDP--DPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++S SE GGFK V+ I G++VYS+LKYESG
Sbjct: 119 GDEAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV+V IDP ++ + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++Q +NK++AL++LR++L +++ +Q+ + R SQVGTG
Sbjct: 239 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAARRSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ RVTDHR+ + + L + L+G++D + Q E L+ A++
Sbjct: 299 DRSERIRTYNFPQGRVTDHRINLTLYRLDAVLEGDLDELCGALIGHYQAEALKAQADA 356
>gi|374294759|ref|YP_005044950.1| peptide chain release factor 1 (bRF-1) [Clostridium clariflavum DSM
19732]
gi|359824253|gb|AEV67026.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
clariflavum DSM 19732]
Length = 360
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 249/352 (70%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++A +++++ KL+DP V+ N EY+KL + AEL E+V+ Y ++K K + E
Sbjct: 1 MFDKLQAAENRYEEINHKLSDPTVIENQDEYRKLMKEHAELQELVNKYGEYKKLTKDIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E D++ +M+ E+K L +++++K+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKELLNEK-LDKDFRDMVELELKEAEESLERIKKEIKILLLPKDPNDEKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E+ WK ++ S+ E GGFK V+ I+GN YSKLK+ESG
Sbjct: 120 GDEASLFAGDLFRMYTKYAEKCGWKTEILDSNPNEIGGFKEVIFAIEGNGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P+TEA GR+HTST TVA++PE +EV+V I+P D+++ T R+ GAGGQ++NK E
Sbjct: 180 VHRVQRIPETEANGRIHTSTVTVAVLPEVEEVDVEINPNDLKIDTFRASGAGGQHINKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTGI + C ++R+Q +NK +A+++LR+KLYE+ +Q +I R +QVGTG
Sbjct: 240 SAIRITHIPTGIVVTCQDQRSQHKNKDKAMRILRSKLYEMAQEQQNSEIAQARKTQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RVTDHR+ + +++ S L+G++D + + Q E L
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKIDSILEGDLDEIIDALITTSQAERL 351
>gi|429765265|ref|ZP_19297565.1| peptide chain release factor 1 [Clostridium celatum DSM 1785]
gi|429186715|gb|EKY27651.1| peptide chain release factor 1 [Clostridium celatum DSM 1785]
Length = 361
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 250/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL +++LSVK++DP +++N E++KL + A+L+ +V+ YR++K + LE
Sbjct: 2 LLDKLAFTENKYEELSVKISDPSIMANQKEWRKLCKEHADLEVIVTAYREYKKVVEDLEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E +D+EM EM++ EI L + ELE K+++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLEEE-SDKEMREMLSEEISMLKEQEEELENKIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E W ++SS+E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GDEAALFAANLFRMYTRYAESQRWSVEMMSSNENDLGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+VE+ I+ KD+ + RS G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDLRIDVYRSSGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C +E++QL+NK +A+++LRA+LYE E+ I R SQVGTG
Sbjct: 241 SAVRITHIPTGTVVACQDEKSQLKNKEKAMKVLRARLYEAAEAERMAGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ + ++L SF++G+I+ + + +Q E ++ + +
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLDSFMNGDIEEVINALITADQAEKMKAMGNT 358
>gi|342215176|ref|ZP_08707835.1| peptide chain release factor 1 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341589404|gb|EGS32684.1| peptide chain release factor 1 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 360
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 247/354 (69%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + DL +++DP+V++ +++KL + A L + V+T+R++K +EE
Sbjct: 2 LVDKLQVIEDKFLDLEQRISDPDVIARQEDWRKLTRQHASLTDTVNTFRQYKQVLAGIEE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + + DE+ M E+ L ELE +L +LLLP DP D +NI++E+R GAG
Sbjct: 62 ALEVLGDKSLDEDFRAMAQEELNELKVRRDELEAELHILLLPKDPNDDKNIIVEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RM+ KY+E W+CT+I ++E E GGFK VV I+G+ VYSKLK+ESG
Sbjct: 122 GDEAALFAGDLFRMFTKYAETQGWRCTIIDANEPELGGFKEVVFSIEGDSVYSKLKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PEA+++++ I+ KD+E+ T R+ GAGGQ++NK E
Sbjct: 182 VHRVQRVPDTESSGRIHTSTVTVAVLPEAEDIDIEINEKDLEIDTYRASGAGGQHINKTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKP+GI + C +ER+QL+N+ +A+++LRAKL + +E + R SQVGTG
Sbjct: 242 SAVRITHKPSGIVVACQDERSQLKNREKAMRVLRAKLQDKAEQEATSAMAADRKSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ EQ ++E
Sbjct: 302 DRSERIRTYNYPQGRVTDHRINLTLYKLNAVLNGDMDELIQALITAEQAAKMQE 355
>gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
17241]
gi|167667899|gb|EDS12029.1| peptide chain release factor 1 [Anaerotruncus colihominis DSM
17241]
Length = 358
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 245/358 (68%), Gaps = 1/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S A ++++S +L +P+V +P +Y L + + L +V YR ++ + +E
Sbjct: 1 MFDKLDSVAARYEEISRRLMEPDVTGDPEQYASLMKEYSRLTPIVEKYRAYRTAKDACDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + E+G D EM E+ ++ L + ++LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AREVLDESGVDREMRELAQEQLDENRAVLDQTAQELKILLLPRDPNDDKNVIVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+E W+C +IS++E E GG+K + I G YS+LKYESG
Sbjct: 121 GEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSITGEGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE QGR+HTST TVA++PEA+EVE +DP+D+++ RS GAGGQ+VNK
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLPEAEEVEFELDPRDLQIDVFRSSGAGGQHVNKTS 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +ER+Q +NK RAL++LRA+L +IKVREQ +KI T+R QVGTG
Sbjct: 241 SAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARLLDIKVREQNDKIATERRLQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ + ++L S L+G++ + +Q E L+ E+
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSVLNGDLAELFDALMTFDQAEKLKSAEEA 358
>gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
Length = 358
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 242/352 (68%), Gaps = 2/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + +L L D V++N S YQK A AEL +VS YR++K ++ L +S+A
Sbjct: 4 KLSVFEDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKA 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L E D++M +++ +I + L ++EE LK+LL+P DP D +N+M+E+RAGAGGDE
Sbjct: 64 LLAEKL-DDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AG L R Y +Y+E+ WK +IS++E GG+K VV I G YS+LKYESGVHR
Sbjct: 123 AALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE+ GR+HTSTATVA++PE ++VEV IDP +I+ R+ G GGQ VN ++A+
Sbjct: 183 VQRVPETESGGRIHTSTATVAVLPEVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
L H PTGI I C +E++QL NK +A++LLRAKLY++K++EQ EK QRLSQVGTG R+
Sbjct: 243 RLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNEKNSAQRLSQVGTGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYNY RVTDHR+ ++ S DG +D + + A +Q + LE +
Sbjct: 303 ERIRTYNYPQGRVTDHRINYTTHQIVSINDGELDELIDALTAADQIKKLENI 354
>gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 358
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 242/352 (68%), Gaps = 2/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + +L L D V++N S YQK A AEL +VS YR++K ++ L +S+A
Sbjct: 4 KLSVFEDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKA 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L E D++M +++ +I + L ++EE LK+LL+P DP D +N+M+E+RAGAGGDE
Sbjct: 64 LLAEKL-DDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AG L R Y +Y+E+ WK +IS++E GG+K VV I G YS+LKYESGVHR
Sbjct: 123 AALFAGTLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE+ GR+HTSTATVA++PE ++VEV IDP +I+ R+ G GGQ VN ++A+
Sbjct: 183 VQRVPETESGGRIHTSTATVAVLPEVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
L H PTGI I C +E++QL NK +A++LLRAKLY++K++EQ EK QRLSQVGTG R+
Sbjct: 243 RLTHIPTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNEKNSAQRLSQVGTGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYNY RVTDHR+ ++ S DG +D + + A +Q + LE +
Sbjct: 303 ERIRTYNYPQGRVTDHRINYTTHQIDSINDGELDELIDALTAADQIKKLENI 354
>gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
653-L]
gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
653-L]
Length = 354
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/350 (45%), Positives = 252/350 (72%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL +K+LS K+ADPE++S+ +QKL + +EL+ +V YR+++ + + E
Sbjct: 1 MLDKLMVLEDKYKELSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + +E +DE++ E+ E+ ++++++E++LK+LL+P DP D +N+++E+R GAG
Sbjct: 61 SKQILEEE-SDEDLRELAKMELSEAESQIVDIEDELKLLLVPKDPNDEKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK +L+SS+E GG+K V IKG YS+LKYESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PE D+VEV I+P+D+ R+ G GGQ VN +
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEVDDVEVQINPEDLRFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG + C +E++QL+NK +AL++L+A+LY+ + +QQ++I +R SQVGTG
Sbjct: 240 SAVRLTHIPTGEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQKEISAERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYN+ RV+DHR+ + ++L SF+DG+ID + ++Q E
Sbjct: 300 DRSERIRTYNFPQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITVDQAE 349
>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 358
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 259/353 (73%), Gaps = 3/353 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+ + +++L KL+DP+V+SNP+ Q+LA+ +E+ +VV YR+++ +K+LEE+ A
Sbjct: 7 KLDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEALA 66
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E+ DE++ E+ E L N + ELEE+L +LLLP DP D R++++E+RAGAGG+E
Sbjct: 67 LTEED--DEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +Y+E+ WK L++++E GG+K +V ++G YS LKYESGVHR
Sbjct: 125 AALFAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTSTATVA++PE DEV+V I P+D+++ T R+ GAGGQ VN ++A+
Sbjct: 185 VQRVPVTEASGRIHTSTATVAVLPEPDEVDVEIRPEDLKIDTFRASGAGGQYVNMTDSAV 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI + C +ER+QL+N+++A+QLLRAKLY++++R QQE + ++R Q+G+G R+
Sbjct: 245 RITHIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQEAMASERRGQIGSGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
E+IRTYN+ NRVTDHR+ + L L+G++D + + A +Q E L+ L
Sbjct: 305 ERIRTYNFPQNRVTDHRIGLTLHNLDEILEGDLDELLYALATADQMEKLKLLG 357
>gi|359410386|ref|ZP_09202851.1| Peptide chain release factor 1 [Clostridium sp. DL-VIII]
gi|357169270|gb|EHI97444.1| Peptide chain release factor 1 [Clostridium sp. DL-VIII]
Length = 360
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/350 (46%), Positives = 248/350 (70%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE + +LSVK++DP ++ N +E++KL + A+L+ +V+ YR++K + L++
Sbjct: 2 LLDKLEFIESKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYREYKKVTEDLQD 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D+EM EM+ EI L+N+ +ELE K+++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSSE-SDKEMREMLNEEISDLTNKEVELENKIQILLLPKDPNDEKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GEEAALFAYNLFRMYTRYAETQRWSVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+VE+ + KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEVLDKDVRIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE RE+ E I R SQVGTG
Sbjct: 241 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEQAERERAEGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYNY RVTDHR+ + ++L +FLDG+++ + + +Q E
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLDTFLDGDLNEMINALITADQAE 350
>gi|429728850|ref|ZP_19263551.1| peptide chain release factor 1 [Peptostreptococcus anaerobius VPI
4330]
gi|429147366|gb|EKX90394.1| peptide chain release factor 1 [Peptostreptococcus anaerobius VPI
4330]
Length = 354
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 160/350 (45%), Positives = 251/350 (71%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL +K+LS K+ADPE++S+ +QKL + +EL+ +V YR+++ + + E
Sbjct: 1 MLDKLMVLEDKYKELSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + +E +DE++ E+ E+ +++ E+E++LK+LL+P DP D +N+++E+R GAG
Sbjct: 61 SKQILEEE-SDEDLRELAKMELSEAESQIAEIEDELKLLLVPKDPNDEKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK +L+SS+E GG+K V IKG YS+LKYESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PE D+VEV I+P+D+ R+ G GGQ VN +
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEVDDVEVQINPEDLRFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG + C +E++QL+NK +AL++L+A+LY+ + +QQ++I +R SQVGTG
Sbjct: 240 SAVRLTHIPTGEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQKEISAERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYN+ RV+DHR+ + ++L SF+DG+ID + ++Q E
Sbjct: 300 DRSERIRTYNFPQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITVDQAE 349
>gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC
824]
gi|337738092|ref|YP_004637539.1| peptide chain release factor 1 [Clostridium acetobutylicum DSM
1731]
gi|384459603|ref|YP_005672023.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
gi|20139340|sp|Q97F68.1|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC
824]
gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
gi|336292864|gb|AEI33998.1| peptide chain release factor 1 [Clostridium acetobutylicum DSM
1731]
Length = 359
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 247/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE + +LSVK++DP V++N SE+QKL + +E++ +V YR++K ++ LE
Sbjct: 1 MLERLEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ D E+ EM+ EIK L +++ EE+L+V+LLP DP D++N+ +E+R G G
Sbjct: 61 DKEMLRDK-IDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ W ++S++E + GGFK +V +KGN YS++KYESG
Sbjct: 120 GEEAALFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTS ATVA++PE D+V++ I+P DI + R+ G GGQ VN +
Sbjct: 180 THRVQRVPNTESSGRIHTSAATVAVLPEVDDVDIEINPNDIRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E+ QL+NK +A+++LRA+LYE E+ I R +QVG+G
Sbjct: 240 SAVRITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERNAGIAENRRNQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + ++L FLDG+ID + EQ E ++E+ +
Sbjct: 300 DRSERIRTYNFPQGRITDHRIGLTIYKLEQFLDGDIDEVINGLITAEQAEKMKEMGNT 357
>gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
Length = 356
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 256/357 (71%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + +L ++DP++++N SE+QK A++ A+L E+V+ +R++K + +++
Sbjct: 1 MLDKLQAIEDKYLELENLISDPDIIANQSEWQKHAKAHAKLTEIVTKFREYKKVLQGMDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + KE +D+ EM+ +E+ L + + LEE+L++L+LP DP D +N+++E+RAGAG
Sbjct: 61 AREMLKEKLDDD-FREMVEAELAELKAKCVRLEEELRILMLPKDPNDEKNVIIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E W+ L+ ++ ++ GGFK VV I+G+ YS+ KYESG
Sbjct: 120 GDEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVVFSIQGDGAYSRFKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP+TEA GR+HTST TVA++PEAD+V +VVI+P D+ + T + GAGGQ+VNK
Sbjct: 180 VHRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLRIDTYCASGAGGQHVNKT 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
E+A+ + H PTGI + C +E++Q++N+ +A+++LRAKL E EQ+ ++ R SQVGT
Sbjct: 240 ESAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKLLEAAQEEQRAQLAQTRKSQVGT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNFELTSF-LDGNIDNAVQSCAAMEQKELLEELA 408
G R+E+IRTYN+ RVTDHR+ + F L+G++D + + +Q E L+++
Sbjct: 300 GDRSERIRTYNFPQGRVTDHRIGLTLHKLDFILNGDLDELINALVTADQAERLKQVG 356
>gi|365873556|ref|ZP_09413089.1| peptide chain release factor 1 [Thermanaerovibrio velox DSM 12556]
gi|363983643|gb|EHM09850.1| peptide chain release factor 1 [Thermanaerovibrio velox DSM 12556]
Length = 357
Score = 343 bits (881), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 252/356 (70%), Gaps = 3/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
I KL+ ++ ++ADPEV +N E Q L++ +EL VV +++++ K LEE
Sbjct: 3 FIGKLKEIEAALAEIEARMADPEVSNNVQEMQSLSKRHSELYPVVQAFKEYQRASKALEE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + DE+M + E++ LS L ELE++LKVLLLP DP D +++++E+RAGAG
Sbjct: 63 AKELMSQE--DEDMRALAREEVQRLSERLPELEQELKVLLLPRDPNDHKDVIIEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+E+ W+ ++ +E GG+K VV +KG+ YSKLK+ESG
Sbjct: 121 GDEAALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGDGAYSKLKFESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PEA++V+V + P+D+++ T R+ GAGGQ VN +
Sbjct: 181 VHRVQRIPATEASGRIHTSTATVAVLPEAEDVDVQVRPEDLKIDTYRASGAGGQYVNMTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+QL+N+++A+QLLRA+LY+++++ QQ ++ +R QVGTG
Sbjct: 241 SAVRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDMELQRQQAQMAAERKGQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY NR+TDHR+ ++L LDG++ +++ +Q E L+ LA
Sbjct: 301 DRSERIRTYNYPQNRLTDHRIGFTLYKLDQVLDGDLYELIEALRMADQAEKLKTLA 356
>gi|410584301|ref|ZP_11321406.1| peptide chain release factor 1 [Thermaerobacter subterraneus DSM
13965]
gi|410505163|gb|EKP94673.1| peptide chain release factor 1 [Thermaerobacter subterraneus DSM
13965]
Length = 389
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 249/343 (72%), Gaps = 2/343 (0%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGND 124
+ L +LADP V ++P +Q LAQ AEL+ +V YR++++ LE +RAL +E
Sbjct: 45 FDQLERELADPAVAADPRRWQPLAQERAELEPLVEAYRRWREAAADLEAARALLREAEEA 104
Query: 125 EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
+E A +A+E++ L E LE L+ LLLP DP D R++++E+RAG GG+EA ++AGDL
Sbjct: 105 DERA-YLAAEVERLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAALFAGDL 163
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
RMYQ+Y+E+ W+ +++++E++ GGFK ++ + G +S+LK+ESGVHRVQRVP TE
Sbjct: 164 FRMYQRYAERQGWRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQRVPVTE 223
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
A GR+HTSTATVA++PEA+EVEV IDP D+E+ T + G GGQ+VNK E+A+ + HKPTG
Sbjct: 224 AGGRIHTSTATVAVLPEAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVRITHKPTG 283
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
I + C +ER+Q +N++RA+++LRA+L + R QQE++ QR SQVGTG R+EKIRTYN+
Sbjct: 284 IVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQVGTGERSEKIRTYNF 343
Query: 365 KDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
++NRVTDHR+ + + L +DG++D + + AA +++ L E
Sbjct: 344 RENRVTDHRIGLTLYRLQEVMDGDLDELLDALAAHDEQVRLGE 386
>gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21]
gi|352683945|ref|YP_004895929.1| peptide chain release factor [Acidaminococcus intestini RyC-MR95]
gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21]
gi|350278599|gb|AEQ21789.1| peptide chain release factor [Acidaminococcus intestini RyC-MR95]
Length = 359
Score = 343 bits (880), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 250/354 (70%), Gaps = 1/354 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
+ KL++ + DL K++DP V+S+ +++QK ++ A+L +VV TYR ++ +K ++
Sbjct: 5 LDKLQALEDRYIDLEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKTYDDD 64
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+AL + +DEE+A M E+K L+ +L + E++L +LLLP DP D +NI++E+RAGAGG
Sbjct: 65 QALLEMGESDEELAAMAEMEMKELAPQLEDYEKRLTILLLPKDPNDEKNIIMEIRAGAGG 124
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA ++AGDL RMY +Y+E W+ L+ SS GGFK V+ + G+ VYS +K+ESGV
Sbjct: 125 DEAALFAGDLFRMYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKFESGV 184
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP+TEAQGR+HTSTATVA+MPEA+EV+V I DI + T R+GGAGGQ VNK E+
Sbjct: 185 HRVQRVPETEAQGRIHTSTATVAVMPEAEEVDVDIKMSDIRIDTYRAGGAGGQYVNKTES 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTGI C +E++Q +N+ + L++LR+++YE Q+ ++R SQVGTG
Sbjct: 245 AVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRIYEAAQEAQRAAEESERRSQVGTGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + +LT ++G++D + + EQ + L+++
Sbjct: 305 RSERIRTYNFPQGRVTDHRIGLTLHKLTDVMNGDLDELLGALMTEEQTKKLQQV 358
>gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521]
gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521]
gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 360
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 250/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE + +LSVK++DP ++ N +E++KL + A+L+ +V+ Y+++K + LE
Sbjct: 2 LLDKLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E ND+EM EM++ EI L+ +ELE +++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSEE-NDKEMREMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GEEAALFAYNLFRMYTRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST+TVA++PE D+VE+ I KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTSTVAVLPEVDDVEIEISEKDLRIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++L+++LYE RE+ E I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLKSRLYEQAERERAEGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ + ++L +FL+G+ID + + +Q E ++ + +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLETFLNGDIDEMINALITADQAEKMKAMGNT 358
>gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium succinatutens
YIT 12067]
Length = 355
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 250/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + DL K++DPEV+++ + + K ++ A+L+ +V+ YR+++D K +E
Sbjct: 1 MLDKLQALEDRYLDLEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L G+DEE+ EM E+K L ++ E EEKL +LLLPSDP D +N+++E+R GAG
Sbjct: 61 AEELLA-AGDDEELVEMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AG L RMY +Y+E W+ ++ S+ E GGFK VV +I G+ VYS++K+ESG
Sbjct: 120 GDEAALFAGVLFRMYLRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTST TVA++PEA+EV+V I+P D+ + T R+GGAGGQ VNK E
Sbjct: 180 VHRVQRVPETESQGRVHTSTVTVAVLPEAEEVDVEINPADLRVDTYRAGGAGGQYVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C +E++QL+N+ + +++LRA++ E EQ+ R SQVGTG
Sbjct: 240 SAVRITHIPTGIVAQCQDEKSQLKNREKCMRVLRARILEQAQEEQRAATAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY RVTDHR+ + +L S ++G++D + + +Q E L ++
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQSEQLRQV 354
>gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328]
gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
gi|417926484|ref|ZP_12569883.1| peptide chain release factor 1 [Finegoldia magna
SY403409CC001050417]
gi|238687758|sp|B0S2B6.1|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC
29328]
gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
gi|341589334|gb|EGS32616.1| peptide chain release factor 1 [Finegoldia magna
SY403409CC001050417]
Length = 355
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L+S +KDL VK+ADPEV+++ + KL + A+L+ VV+ Y +KD K LEE
Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L G D EM E++ EI +L ++ + +E+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 DKELLGTTG-DSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AG+L+RMYQ YS++ W ++ + GG K VVM +KG YS+LKYESG
Sbjct: 120 GDEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVPQTE+ GR+HTSTATVA++PEA++V+V I+ KD+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q++NK +A+++L+++LY++ E+ + R SQVGTG
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKNKDRADARKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ R+TDHR+ K F+L +FLDG+I+ + + +Q E L
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKL 351
>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
gi|226739103|sp|B8E003.1|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
Length = 367
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 256/368 (69%), Gaps = 2/368 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + +I KLE K ++++ LA +V+S+ ++YQ L + A+++E+V +R++K
Sbjct: 1 MLQKLVIDKLEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E+ + KE DE++ + +E++ + +L ++E +LK LLLP DP D +NI++E+
Sbjct: 61 KEKEDLEEMVKEE-QDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA ++A DL RMY Y+++ WK ++SS+ GGFK ++ ++G YS+L
Sbjct: 120 RAGTGGEEAALFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE+ GR+HTSTATVA++PE +E+EV IDPKD+ + T RSGGAGGQ+
Sbjct: 180 KFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEIEVEIDPKDLRIETFRSGGAGGQH 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNK E+ + + H P+GI + C +ER+Q QN+ +A+++LRA+LYE RE++ +I +QR
Sbjct: 240 VNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQ 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG R+EKIRTYN+ RVTDHR+ +F+L L G +D + E++E +++L
Sbjct: 300 QVGTGERSEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEKEEQIKKL 359
Query: 408 AESVGAPS 415
E VGA S
Sbjct: 360 FEEVGATS 367
>gi|452994950|emb|CCQ93433.1| peptide chain release factor RF-1 [Clostridium ultunense Esp]
Length = 355
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 252/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL K +K+LS K+ DPE+++N E+Q+L + A+++ +V Y+++ +K LEE
Sbjct: 1 MLEKLSFIEKKYKELSQKIIDPEIINNIEEWQRLVKEHADIEPIVIKYKEYTRAQKTLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +DE M E++ E+ + LEE+L++LL+P DP D +N+++E+RAGAG
Sbjct: 61 DKEMLKEKLDDE-MKELLKEEVAEYEELIENLEEELRILLIPKDPNDHKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AGDL RMY Y+E+ WK L+SS+E GGFK V+ IKG YS+LKYESG
Sbjct: 120 GDEAGLFAGDLFRMYSMYAERQGWKTELMSSNEQGVGGFKEVIFMIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEA+++++ I+ DI + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPTTESSGRIHTSTATVAVLPEAEDIDIEINQNDIRIDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +N+ +A+++L+ +LY+ +REQ +I +R SQVGTG
Sbjct: 240 SAVRITHIPTGMVVSCQDEKSQHKNRDKAMKILKTRLYDQMMREQHNEIAEERRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ R+TDHR+ M ++L +FLDG+ID + +Q E L+++
Sbjct: 300 DRSERIRTYNFPQGRITDHRINMTLYKLENFLDGDIDEMIDGLITSDQAEKLKQVG 355
>gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
Length = 357
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 256/357 (71%), Gaps = 1/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ + +++L+ K+ADP+++++ +++QKL + A ++ +++ Y ++K + +EE
Sbjct: 1 MLEKLDFLSSKYQELNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + + D++ EM +E+ L+ LE++LKVLLLP DP D +N+++E+RAGAG
Sbjct: 61 SKEMLSDKSIDKDFEEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA ++AGDL RM+ +Y+E+ WK +++S+ + GG K + I+G YS+LKYESG
Sbjct: 121 GSEAALFAGDLFRMFTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA++VE+ I+P D+ + RS G GGQ VN +
Sbjct: 181 VHRVQRIPSTESGGRIHTSTATVAVLPEAEDVEIDINPNDLRIDVYRSSGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H+PTG+ + C +E++QL+NK +A+++L+A+L+EI++++QQ +I R SQVGTG
Sbjct: 241 SAVRITHEPTGMVVTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQSEIAENRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ M ++L +FLDG ID V + +Q E L++ E
Sbjct: 301 DRSERIRTYNFPQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALITSDQAEKLKQQGE 357
>gi|339448694|ref|ZP_08652250.1| peptide chain release factor 1 [Lactobacillus fructivorans KCTC
3543]
Length = 362
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 248/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + + +L+ ++DPE++++ ++ KL++ L E V TY K+K KQL++
Sbjct: 4 IFDKLQSVSDRYDELNELISDPEIIADTQKFMKLSKEEGSLRETVETYNKYKKISKQLDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E D EM EM+ SEI L ++ +LEE++K+LL+P DP D +NI++E+R AG
Sbjct: 64 DETMLREKL-DSEMEEMVKSEISDLKDQKAKLEEQMKLLLIPKDPNDEKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ WK +I ++ E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAADLYNMYTKYAERQGWKIEVIDETDTEVGGFKEIVLMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPE ++V++ IDP DI RS GAGGQ++NK
Sbjct: 183 AHRVQRIPSTESAGRVHTSTATVGVMPEEEDVDIDIDPGDIRTDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q + +R +GTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRVLKARVYDYYKQKEQNEYDEKRKDAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L +DG++D+ + + +Q + LE+L +S
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMDGDLDDIIDALIVSDQAKKLEKLNDS 360
>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Marvinbryantia formatexigens DSM
14469]
Length = 357
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/348 (47%), Positives = 243/348 (69%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++L +L +P V S+P+ +QKL + L +V Y+++K+C+K +E+
Sbjct: 1 MFDKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ + +DEEM EM+ E+ + + + ELE +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLAML-DGESDEEMREMLKEELNTAKDRIAELETELKILLLPKDPNDDKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ R+Y KY+E+ W+ L+++ E GG K V I G YS+LKYESG
Sbjct: 120 GDEAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTVTVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI ++ E++QLQNK++A LLRAKLY+I+ ++ + R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQKAHDAEAQLRRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+K+ ++L S +DG+ID + S A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIAADQ 347
>gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
28L]
gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
28L]
Length = 360
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 243/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+++ + DL +++DP V++ E+QKL + A L ++ YRK+++ K +
Sbjct: 2 FLDKVQAVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIRG 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
R L + D E+ M EI L+ E LEEKL +L+LP DP D +N+++E+R GAG
Sbjct: 62 DRELLDDPSTDTELTAMAKEEIAELTKEQAALEEKLHILMLPKDPHDDKNVIMEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++AGDL RMY KY E Q WK LIS++E E GG+K VV ++G VY KLKYES
Sbjct: 122 GDEAALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYES 181
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEA GR+HTSTATVA++PEAD+VE+ +D KD+ + R+ GAGGQ++NK
Sbjct: 182 GVHRVQRVPVTEAGGRIHTSTATVAVLPEADDVEIDLDMKDVRVDYFRASGAGGQHINKT 241
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H P+GI + C +ER+QL+N+++AL++L+A+L + + +++ R SQVGT
Sbjct: 242 SSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKARLLDQAQQAAAQEVTEARRSQVGT 301
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A + EL++
Sbjct: 302 GDRSERIRTYNYPQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARRAELMQ 355
>gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
gi|166977358|sp|A8MJX9.1|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
Length = 357
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 252/355 (70%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + ++DLS K+++PE++++ +++KL + ++L+E+V YR++K E+ L +
Sbjct: 1 MLDKLAFLEEKYEDLSEKISEPEIINDQPQWKKLVKEHSDLEEIVMKYREYKKTEQGLND 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + ++ DEE EM EI L ++ LE +LK+LLLP DP D +++++E+RAGAG
Sbjct: 61 AKEILRDKTADEEFREMAKMEIAELEEKIEVLEGELKILLLPKDPNDDKDVIVEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL RMY +Y+E WK ++S+++ GG+K V+ IKG+ YS+LKYESG
Sbjct: 121 GDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMIKGHGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTST TVA++PEAD+V+ +D DI + RS G GGQ+VN +
Sbjct: 181 VHRVQRIPSTESGGRIHTSTITVAVLPEADDVDFELDMNDIRVDVFRSSGNGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C +E++QL+NK +AL++LRA+L ++ ++EQQ +I R SQVGTG
Sbjct: 241 SAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQEQQAEIAQDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ R+TDHR+ + + L SFL+G+I + + +Q E L+E+
Sbjct: 301 DRSERIRTYNFPQGRITDHRINVTLYRLDSFLNGDIQEMIDALITTDQAEKLKEV 355
>gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
Length = 357
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/358 (47%), Positives = 252/358 (70%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + + DL +L+DP VV + Y+KLA++ A+L EVV +R+ K + LEE
Sbjct: 1 MFAKLESLERKYVDLETQLSDPAVVGDQERYRKLAKAHADLAEVVEAFREHKRLSRDLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ LA++ D EM E+ +E++++ L ELE +LK+LLLP DP+D +NI+LE+RAG G
Sbjct: 61 NTELAQDP--DPEMRELALAEVRTIREALPELEARLKLLLLPKDPMDEKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E WK ++SSSE GGFK V+ I G++VYS+LKYESG
Sbjct: 119 GEEAALFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANISGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV+V IDP D+ + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +NK++AL++LR++L + + +Q+ + R SQVG+G
Sbjct: 239 SAVRVTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQRLEQEASRRSQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ +RVTDHR+ + ++L + L+G++D A Q E L+ A++
Sbjct: 299 DRSERIRTYNFPQSRVTDHRINLTLYKLEAVLEGDLDELFDGLIAHYQSEALKAQADA 356
>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
17244]
gi|169259411|gb|EDS73377.1| peptide chain release factor 1 [Anaerofustis stercorihominis DSM
17244]
Length = 355
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 251/350 (71%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+S K + ++S +++P++++N Y +L + + L+ +V Y+K+ D +QLE
Sbjct: 1 MLDKLKSIEKRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + ++ +D++ EMI +I SL+ + LE+++K+LL+P DP D +N+++E+RAG G
Sbjct: 61 NKEMLNDS-DDDDFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY +Y+E+N WK ++S++E GG+K V I+G YS+LKYESG
Sbjct: 120 GDEAALFAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTS TVA++PEA++VEV IDP D+ + RS G GGQ+VN +
Sbjct: 180 THRVQRIPDTESSGRIHTSAITVAVLPEAEDVEVNIDPNDLRIDVYRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +AL++L+A+L+EI+ R+QQE I + R SQ+G+G
Sbjct: 240 SAVRITHIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEAIASNRKSQIGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYN+ RVTDHR+ + ++L LDG+ID + + +Q E
Sbjct: 300 DRSERIRTYNFPQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIVQDQSE 349
>gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
Length = 361
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 244/355 (68%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + +L+ ++DPEV+++ + KL++ EL + V+ Y K+K+ KQL++
Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ M+ EI ++ +LE++LKV+LLP DP D +NI++E+ AG
Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE ++A DL MY KY+E+ WK +I SE E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q++ +R S +GTG
Sbjct: 244 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSAIGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D+ V + +Q + LE L
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQAKKLENL 358
>gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB]
gi|119361624|sp|Q2LWU9.1|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus
aciditrophicus SB]
Length = 357
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 242/355 (68%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +KL+ + +L L+DP VV+ S YQK A+ A+L ++V +RK++ +EE
Sbjct: 1 MFSKLKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + G+DEE+ E+ E+ L L LEE+LKVLLLP D D RN+ LE+RAG G
Sbjct: 61 AQQLLR--GDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEK-GGFKTVVMEIKGNRVYSKLKYES 232
GDEAG++ GDL RMY +Y+E WK +ISS+ + GGFK ++ I G YS+LKYES
Sbjct: 119 GDEAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYES 178
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEAQGR+HTS TVAIMPEADEVEV IDP D+ + S G GGQ+VN
Sbjct: 179 GVHRVQRVPVTEAQGRIHTSAVTVAIMPEADEVEVTIDPNDLRIDVFHSSGHGGQSVNTT 238
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C +E++QL+NK++AL++LRA+L +I V++Q ++I R SQVG+
Sbjct: 239 DSAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDEISEARKSQVGS 298
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R+E+IRTYN+ RVTDHR+ + + L + L G+I + + A Q E L++
Sbjct: 299 GDRSERIRTYNFPQGRVTDHRVGLTLYSLENILGGDIQEFIDALTAYFQAESLKQ 353
>gi|342218161|ref|ZP_08710786.1| peptide chain release factor 1 [Megasphaera sp. UPII 135-E]
gi|341590869|gb|EGS34095.1| peptide chain release factor 1 [Megasphaera sp. UPII 135-E]
Length = 360
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 250/354 (70%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+++ + DL +++DP V++N E+QKL + A L ++V T+R +K+ ++
Sbjct: 2 FLDKVQAVENKFMDLEQRISDPAVIANQVEWQKLTKEHASLVDIVDTFRAYKEVRNAVKG 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + + +DEE+ + EI +L + LEEKL +L+LP DP D +N+++E+R GAG
Sbjct: 62 DQEILDDPDSDEELLCIAKEEISTLEKKQAALEEKLHILMLPKDPYDDKNVIMEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++AGDL RMY K+ E Q+ WK +LIS++E E GG+K V+ ++G+ VY KLKYES
Sbjct: 122 GDEAALFAGDLFRMYMKFIEKQSGWKASLISANEPELGGYKEVIFSVEGSGVYGKLKYES 181
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEA GR+HTSTATVA++PEAD+VE+ +D KD+ + R+ GAGGQ+VNK
Sbjct: 182 GVHRVQRVPVTEAGGRIHTSTATVAVLPEADDVEIDLDMKDVRIDYFRASGAGGQHVNKT 241
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H PTGI + C +ER+QL+N+++AL++L+A++ + + +++ R SQVGT
Sbjct: 242 SSAVRMTHIPTGIVVECQDERSQLENRAKALRVLKARMLDQAQQAANKEVTEARRSQVGT 301
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+E+IRTYNY RVTDHR+ + ++L + L+G+ID +Q+ A + EL++
Sbjct: 302 GDRSERIRTYNYPQGRVTDHRVNLTLYKLDNVLNGDIDEFIQALAETRRAELMQ 355
>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
gi|254790894|sp|C0QTI3.1|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
Length = 361
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/362 (45%), Positives = 255/362 (70%), Gaps = 3/362 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M YL+ KLE+ + K L L+DPEV+ + + Q++A+ E +++ Y+++K
Sbjct: 1 MLNKYLLQKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K +EE+++L N DEEM + E+K+L+ ELE+++++ LLP DP D +N++LE+
Sbjct: 61 KDIEETKSLL--NNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
R GAGG+EA ++AG+L RMYQ+Y+E+ WK ++S ++GG K V+ IKG YS+L
Sbjct: 119 RQGAGGEEAALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP+TE+ GR+HTSTATVA++PEA+EV++ I P+++++ T R+ GAGGQ+
Sbjct: 179 KFESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEELKIETMRASGAGGQH 238
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ++A+ + H PTGI + C +ER+QLQN+++A+Q+LRA+L + R ++EKI +R
Sbjct: 239 VNTTDSAVRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLEREKIEKERRM 298
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG R+EKIRTYN+ NRVTDHR+ + L LDG++D + A EQ++ L +
Sbjct: 299 QVGTGDRSEKIRTYNFPQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQEQKLLAI 358
Query: 408 AE 409
+E
Sbjct: 359 SE 360
>gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
Length = 355
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 245/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L+S +KDL VK+ADPEV+++ + KL + A+L+ VV+ Y +KD K LEE
Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + G D EM E++ EI +L ++ + +E LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 DKEMLGTTG-DSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AG+L+RMYQ YS++ W ++ + GG K VVM +KG YS+LKYESG
Sbjct: 120 GDEAGLFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVPQTE+ GR+HTSTATVA++PEA++V+V I+ KD+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q++NK +A+++L+++LY++ E+ + R SQVGTG
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKNKDRADARKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ R+TDHR+ K F+L +FLDG+I+ + + +Q E L
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKL 351
>gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
Length = 355
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L+S +KDL VK+ADPEV+++ + KL + A+L+ VV+ Y +KD K LEE
Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L G D EM E++ EI +L ++ + +E+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 DKELLGTTG-DSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AG+L+RMYQ YS++ W ++ + GG K VVM +KG YS+LKYESG
Sbjct: 120 GDEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVPQTE+ GR+HTSTATVA++PEA++V+V I+ KD+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q++NK +A+++L+++L+++ E+ + R SQVGTG
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLFDLMEEEKNKDRADARKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ R+TDHR+ K F+L +FLDG+I+ + + +Q E L
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKL 351
>gi|337285924|ref|YP_004625397.1| peptide chain release factor 1 [Thermodesulfatator indicus DSM
15286]
gi|335358752|gb|AEH44433.1| peptide chain release factor 1 [Thermodesulfatator indicus DSM
15286]
Length = 366
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/332 (48%), Positives = 243/332 (73%), Gaps = 3/332 (0%)
Query: 47 ICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKD 106
+ A YL KL+ K +++L+ +L DP VV++ +Y ++A+ ++L E+V TYR++K
Sbjct: 1 MSFAAHYL-KKLDEVEKRFEELTAQLGDPAVVNDRDKYTQIAREHSDLSEIVETYRRYKK 59
Query: 107 CEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIML 166
K + +++ L ++ DEE+A++ E+K L E LE++L +LL+P DP D +NIML
Sbjct: 60 VLKDIADNKELLEDA--DEEIAKLAREELKELEAEREALEKRLMLLLVPKDPNDEKNIML 117
Query: 167 EVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYS 226
E+RAG GG+EA ++A DL RMY +Y+E+ W+ ++ + GGFK ++ IKG YS
Sbjct: 118 EIRAGTGGEEAALFAADLFRMYSRYAERKGWEVEILDVNPTGLGGFKEIIAMIKGKGAYS 177
Query: 227 KLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGG 286
+LKYESGVHRVQR+P+TE+ GR+HTS TVA++PEA+EV+V I P+D+++ T R+ GAGG
Sbjct: 178 RLKYESGVHRVQRIPETESGGRIHTSAVTVAVLPEAEEVDVEIRPEDLKIDTMRASGAGG 237
Query: 287 QNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQR 346
Q+VNK E+A+ + H PTGI ++C ER+Q QN+++A+Q+LR +LYEIK+REQ+EKIR +R
Sbjct: 238 QHVNKTESAVRITHIPTGIVVYCANERSQHQNRAKAMQILRTRLYEIKLREQEEKIRAER 297
Query: 347 LSQVGTGARAEKIRTYNYKDNRVTDHRLKMNF 378
SQVG+G R+E+IRTYN+ NR+TDHR+ +
Sbjct: 298 RSQVGSGDRSERIRTYNFPQNRITDHRIGLTL 329
>gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630]
gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26]
gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932]
gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42]
gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255]
gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55]
gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34]
gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79]
gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63]
gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196]
gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291]
gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58]
gi|384362677|ref|YP_006200529.1| peptide chain release factor 1 [Clostridium difficile BI1]
gi|423080813|ref|ZP_17069430.1| peptide chain release factor 1 [Clostridium difficile 002-P50-2011]
gi|423087214|ref|ZP_17075603.1| peptide chain release factor 1 [Clostridium difficile 050-P50-2011]
gi|423090583|ref|ZP_17078872.1| peptide chain release factor 1 [Clostridium difficile 70-100-2010]
gi|119361524|sp|Q180Y2.1|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile 630]
gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196]
gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291]
gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
gi|357545152|gb|EHJ27132.1| peptide chain release factor 1 [Clostridium difficile 050-P50-2011]
gi|357552302|gb|EHJ34076.1| peptide chain release factor 1 [Clostridium difficile 002-P50-2011]
gi|357556287|gb|EHJ37902.1| peptide chain release factor 1 [Clostridium difficile 70-100-2010]
Length = 354
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 248/350 (70%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE T+KDLS K+ DP+V+++ +QK + A+L+ +V YR++K ++E
Sbjct: 1 MLKKLEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + +E +DEE+ E+ E+ + ++ LEE++K+LLLP DP D +N+++E+R GAG
Sbjct: 61 SKEILQEE-SDEELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK L+S+S+ GG+K V IKG YS+LKYESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTST+TVA++PE ++VEV I+P D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRIPSTESGGRIHTSTSTVAVLPEVEDVEVEINPNDLRIDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C + ++QL+NK +AL++L+A+LY+ + EQ + I +R SQVGTG
Sbjct: 240 SAVRVTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKALAEQHKDIAAERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYN+ R++DHR+ + ++L +FLDG+ID + + ++Q E
Sbjct: 300 DRSERIRTYNFPQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQTE 349
>gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
Length = 361
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 244/355 (68%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + +L+ ++DPEV+++ + KL++ EL + V+ Y K+K+ KQL++
Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ M+ EI ++ +LE++LKV+LLP DP D +NI++E+ AG
Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE ++A DL MY KY+E+ WK +I SE E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 124 GDEGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q++ +R S +GTG
Sbjct: 244 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSAIGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D+ V + +Q + LE L
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQAKKLENL 358
>gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 357
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 243/353 (68%), Gaps = 1/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + +L+ ++DPEV+++ + KL++ EL + V+ Y K+K+ KQL++
Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ M+ EI ++ +LE++LKV+LLP DP D +NI++E+ AG
Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE ++A DL MY KY+E+ WK +I SE E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q++ +R S +GTG
Sbjct: 244 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQEQDQYNAERKSAIGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYNY NRVTDHR+ + +L ++G +D+ V + +Q + LE
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQAKKLE 356
>gi|335049819|ref|ZP_08542803.1| peptide chain release factor 1 [Megasphaera sp. UPII 199-6]
gi|333762096|gb|EGL39608.1| peptide chain release factor 1 [Megasphaera sp. UPII 199-6]
Length = 360
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 243/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+++ + DL +++DP V++ E+QKL + A L ++ YRK+++ K +
Sbjct: 2 FLDKVQAVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIRG 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
R L + D E+ M EI L+ + LEEKL +L+LP DP D +N+++E+R GAG
Sbjct: 62 DRELLDDPSTDTELTAMAKEEIAELTKKQAALEEKLHILMLPKDPHDDKNVIMEIRGGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++AGDL RMY KY E Q WK LIS++E E GG+K VV ++G VY KLKYES
Sbjct: 122 GDEAALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYES 181
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEA GR+HTSTATVA++PEAD+VE+ +D KD+ + R+ GAGGQ++NK
Sbjct: 182 GVHRVQRVPVTEAGGRIHTSTATVAVLPEADDVEIDLDMKDVRVDYFRASGAGGQHINKT 241
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H P+GI + C +ER+QL+N+++AL++L+A+L + + +++ R SQVGT
Sbjct: 242 SSAVRMTHMPSGIVVECQDERSQLENRTKALRVLKARLLDQAQQAAAQEVTEARRSQVGT 301
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+E+IRTYNY RVTDHR+ + ++L + L+G++D +Q+ A + EL++
Sbjct: 302 GDRSERIRTYNYPQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARRAELMQ 355
>gi|357419584|ref|YP_004932576.1| peptide chain release factor 1 [Thermovirga lienii DSM 17291]
gi|355397050|gb|AER66479.1| peptide chain release factor 1 [Thermovirga lienii DSM 17291]
Length = 357
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KL+ +T+K++ KLADP+ +S+P E QKLA+ A L+E+V TYR++K+ ++ E
Sbjct: 3 LSKKLKEVEETYKEIEKKLADPQYISDPKELQKLAKKHATLEEIVQTYRQYKEVVDRISE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R+L + +D+E+AEM E++ L E L E+LKVLLLP DP D +++++E+RAGAG
Sbjct: 63 ARSLL--HASDKELAEMAQEELRELEPEEERLTERLKVLLLPKDPNDDKSVIMEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +++E+ W +++ E GG+K VV I G YS+LKYESG
Sbjct: 121 GDEAALFAGDLYRMYTRFAERKGWNTEIMTMHETGIGGYKEVVFRIDGVGAYSQLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEA++V+V I +D+++ T R+ GAGGQ+VN +
Sbjct: 181 VHRVQRVPVTESSGRIHTSTATVAVLPEAEDVDVEIREEDLKIDTYRASGAGGQHVNMTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++N+++A++LLRAKL + ++++Q ++ +R Q+GTG
Sbjct: 241 SAVRITHLPTGIVVTCQDERSQIKNRAKAMKLLRAKLLDNEIQKQTAELAAERKGQIGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + ++L LDG++D + + +Q E L+ L
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLYKLDQMLDGDLDEMISALIIADQSEKLKAL 355
>gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
BAA-798]
gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
BAA-798]
Length = 355
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 258/353 (73%), Gaps = 3/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ K + +L ++DPE+ S+PS ++A+ +EL+++VS YR++K + EE
Sbjct: 1 MLERLDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKKVKLTREE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
R L ++ D ++ +M E + L++ +LEE+LK+ LLP DP D +++++E+RAG G
Sbjct: 61 DRRLMEDP--DPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ WK ++S+SE++ GGFK ++ E+KG YS+LKYESG
Sbjct: 119 GEEAALFAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGR+HTSTATVA++PEA+EVEV IDP+D+ + RS G GGQ+VN +
Sbjct: 179 VHRVQRVPVTESQGRIHTSTATVAVLPEAEEVEVEIDPEDLRIDVFRSTGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+N+++A+ +LRA+LYE++ R+++E++ R S VGTG
Sbjct: 239 SAVRITHLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRKREEELGQVRRSMVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+EKIRTYN+ +RVTDHR+K +F L + LDG ID ++S ++ E L+
Sbjct: 299 ERSEKIRTYNFPQDRVTDHRIKESFSNLPAILDGEIDRIIESLQVADRAEQLQ 351
>gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
Length = 358
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 258/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + ++ L+ L+DP+VV++ + +K ++ AEL + V YR +K +++L +
Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E SL NEL E+EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLNETSDKEEI-EMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +++K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L+ L+GN+D + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLSQILEGNLDEIIDALTLSEQTDKLKEL 353
>gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|166223538|sp|A4XJN1.1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|145410112|gb|ABP67116.1| peptide chain release factor 1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 355
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 250/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K++DPE+++N E+QKL + + L +V +R++K K +EE
Sbjct: 1 MIEKLQVIEEKYLELEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYKRIIKTIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L N DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELLDTN-LDEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIETFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRITHKPTGIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALITHFQTERLKEVG 355
>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
27405]
gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
gi|385777561|ref|YP_005686726.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
gi|419722892|ref|ZP_14250029.1| Peptide chain release factor 1 [Clostridium thermocellum AD2]
gi|419726392|ref|ZP_14253415.1| Peptide chain release factor 1 [Clostridium thermocellum YS]
gi|166223552|sp|A3DIL4.1|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|125715301|gb|ABN53793.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
27405]
gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
gi|380770444|gb|EIC04341.1| Peptide chain release factor 1 [Clostridium thermocellum YS]
gi|380781272|gb|EIC10933.1| Peptide chain release factor 1 [Clostridium thermocellum AD2]
Length = 360
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 237/325 (72%), Gaps = 1/325 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K ++A + +++ +L+DP V++N EY+KL + AEL+ +V+ Y ++K K++ +
Sbjct: 1 MFEKFQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E D+E EM+ +E+K +L L++++K+LLLP DP D RN+++E+R GAG
Sbjct: 61 AKEMLNEKL-DKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+N WK ++ S+ E GGFK VV I+GN YS+LK+ESG
Sbjct: 120 GDEAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GRVHTST TVA++PEA+E++V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 180 VHRVQRVPVTEANGRVHTSTVTVAVLPEAEEIDVEINPNDLRIDTYRASGAGGQHINKTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +NK +A+++LR+KLYE+ +Q +I +R SQVGTG
Sbjct: 240 SAIRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQHNEIAQERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF 378
R+E+IRTYN+ RVTDHR+ +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTL 324
>gi|374997928|ref|YP_004973427.1| peptide chain release factor 1 [Desulfosporosinus orientis DSM 765]
gi|357216294|gb|AET70912.1| peptide chain release factor 1 [Desulfosporosinus orientis DSM 765]
Length = 356
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 248/352 (70%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + +L+ L+DPE+++N SE+QK A++ A + +V+T+R +K+ +LEE
Sbjct: 1 MLEKLYEIERKYDELTELLSDPEIIANQSEWQKYAKAQAGMTNLVTTFRDYKEVRHELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ AL KE+ D EM EM E L N+ ELEE++++LLLP DPLD +N+++E+RAGAG
Sbjct: 61 TEALLKED-LDSEMKEMAEQEKDELLNKSRELEEQIRILLLPKDPLDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK L+S++ +E GG+K ++ I+G YSKLK+ESG
Sbjct: 120 GDEAALFAGDLYRMYTRYAEGQGWKAELLSANYSEAGGYKEIIFLIEGQGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA++VEV I+P D+ + S G GGQ VN +
Sbjct: 180 VHRVQRIPATESAGRIHTSTATVAVLPEAEDVEVSINPNDLRIDIYCSSGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C +E++QL+NK +AL++LRA++ E E + +QR +QVGTG
Sbjct: 240 SAVRITHIPTGIIASCQDEKSQLKNKEKALRVLRARILEKAQEEALGEQASQRRTQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRT+N+ RVTDHR+ + L + L G ++ +Q+ ++ +Q E L
Sbjct: 300 DRSERIRTFNFPQGRVTDHRINLTLHRLETILTGELEELIQALSSSDQAERL 351
>gi|445059136|ref|YP_007384540.1| peptide chain release factor 1 [Staphylococcus warneri SG1]
gi|443425193|gb|AGC90096.1| peptide chain release factor 1 [Staphylococcus warneri SG1]
Length = 358
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + ++ L+ L+DP+VV++ + +K ++ AEL + V YR +K +++L +
Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E SL NEL E+EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLNETSDKEEI-EMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E + +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHHFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L+ ++GN+D + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLSQIMEGNLDEIIDALTLSEQTDKLKEL 353
>gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL
B-30929]
gi|406026781|ref|YP_006725613.1| peptide chain release factor 1 [Lactobacillus buchneri CD034]
gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL
B-30929]
gi|405125270|gb|AFS00031.1| bacterial peptide chain release factor 1 (bRF- 1) [Lactobacillus
buchneri CD034]
Length = 360
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 248/355 (69%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + +L+ ++DPEV+++ ++ KL++ A+L + V+ ++K++ KQL++
Sbjct: 4 IFDKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQLDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +E +D+ + M+ EI SL++E +LE+++KV+LLP DP D +NI++E+ AG
Sbjct: 64 DKEMLREKIDDD-LEAMVKDEITSLTDEKDKLEDQMKVMLLPKDPNDDKNIIMEIHGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE ++A DL MY KY+E+ WK +I +E E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 123 GDEGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+ +A+++L+A++Y+ +++Q++ +R S +GTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQEQDQYNAERKSAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVSDQAKKLENL 357
>gi|395242226|ref|ZP_10419225.1| Peptide chain release factor 1 [Lactobacillus pasteurii CRBIP
24.76]
gi|394480587|emb|CCI85465.1| Peptide chain release factor 1 [Lactobacillus pasteurii CRBIP
24.76]
Length = 361
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 251/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+S+ S Y ++++ A+L EVV Y+++K ++ +++
Sbjct: 4 VMARLEGLVAHYEELQEMMADPEVISDTSRYMEISKEEADLREVVQKYKQYKSDQQDIKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + D ++ EM E L E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NNEIISTE-TDADLVEMAKEENSELEKEVAELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+EQ WK +L+ S E E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAEQQGWKISLVDSEETEVGGYKRVAVMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + R+ GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIELDPKDIRVDVYRASGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + +++ +R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNRDQYDAERKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G ++ + + Q + LEELA++
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELNEIIDALILYNQTKQLEELADN 360
>gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
Length = 357
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 246/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ LE + +K+L KLADPEV+S+ ++K+++ +L +V Y + + E + E
Sbjct: 1 MLENLEHMRENFKELEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L KE +D+EM +++ SEI L + E LKVLL+P+DP D +++++E+RAGAG
Sbjct: 61 NTELLKE-ADDKEMIDLLKSEIDENKKNLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EAG++AG+L RMY Y+++ +K I S GG K ++G YSKLKYESG
Sbjct: 120 GEEAGLFAGNLYRMYHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PEADEV++ IDP DI RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA+LYEI+ +++Q++I R SQVGTG
Sbjct: 240 SAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQKEISDNRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ K ++L FLDGNI+ ++S +Q L+ + E
Sbjct: 300 DRSERIRTYNYPQGRITDHRINKTIYQLDDFLDGNIEEMIESLITEDQTRKLKTMGED 357
>gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 358
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 247/355 (69%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KL+ A T +++ K+ADP V SNP E Q L + AEL E+V Y ++K +LEE
Sbjct: 3 LDDKLQEIAATHEEIEHKMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYKRIRSELEE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL + +D EMA++ E+ SL L E E+K+ +LLLP DP D +++M+E+RAG G
Sbjct: 63 AKALL--DSDDPEMAQLAKEEVHSLEPLLEEQEKKVTLLLLPKDPNDDKSVMVEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +++EQ W ++ ++E E GG+K +V ++ G YS LKYESG
Sbjct: 121 GDEAALFASDLFRMYSRFAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PEA+E +V + +D+++ T RS GAGGQ+VN +
Sbjct: 181 VHRVQRVPATESGGRIHTSAATVAVLPEAEEFDVEVRQEDLKIDTYRSSGAGGQHVNMTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++N++RA+ LR KLY+++ R++Q+ +R Q+G+G
Sbjct: 241 SAVRITHLPTGIVVTCQDERSQIKNRARAMAFLRTKLYDMEQRKRQDAEAQERKGQIGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NR+TDHR+ + ++L + + G+I V++ EQ E +++L
Sbjct: 301 DRSERIRTYNFPQNRITDHRIGLTLYKLDAAMGGSITELVEALRMAEQAERMKDL 355
>gi|344995777|ref|YP_004798120.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
6A]
gi|343963996|gb|AEM73143.1| Peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
6A]
Length = 355
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K+ADPE++S P E+QKL + + L +V +R++K ++E
Sbjct: 1 MIEKLQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELL-DTDLDEDFEKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG +D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEVG 355
>gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073]
gi|119361560|sp|Q2RFW0.1|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella
thermoacetica ATCC 39073]
Length = 356
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 252/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE +++L + DPEV+++P + QK A++ A L+++V+T+R+++ +L E
Sbjct: 1 MLEKLEQIEARYEELGRLMGDPEVIADPEQLQKHARAHAALEDIVTTFRRYRQVSNELAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+A+ +E D E E++ +EI+ L+ E LE++LK+LLLP DP D ++I++E+RAGAG
Sbjct: 61 DKAMLEEE-KDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMYQ+Y+E+ W+ +ISS E GGFK ++ +++G VYS+LK+ESG
Sbjct: 120 GEEAALFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA+EV+V I P+D+ + S G GGQ+VN
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEAEEVDVEIKPEDLRVDIFCSSGPGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++LRA+L ++ E++ ++ +R SQVG+G
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGELAEERRSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + L L G +D + + +Q E L+ +
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTLHHLDQVLAGELDEIIDALVTTDQAERLKNM 354
>gi|383761590|ref|YP_005440572.1| peptide chain release factor 1 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381858|dbj|BAL98674.1| peptide chain release factor 1 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 361
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 253/356 (71%), Gaps = 3/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ ++ A + +++ +ADP V ++ + +L + E++E+ TYR+++ +KQ+EE
Sbjct: 4 ILDRVARIADRYDEITALMADPAVAADFARLNELDRERQEIEELAQTYRRYEHVQKQIEE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R+L + DEEM E+ SEI++L EL LE+++K LLLP DP D +N+++E+RAG G
Sbjct: 64 NRSLLHDA--DEEMRELAESEIEALQEELEALEKQMKTLLLPKDPKDEKNVIVEIRAGTG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +++E + +K L+S +E GG K V+ IKG YSKLKYESG
Sbjct: 122 GEEASLFAAELYRMYTRWAEAHRYKVELLSINETGLGGVKEVIFAIKGKGAYSKLKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PEADE++VVI+ D+ + RS G GGQ+VN +
Sbjct: 182 VHRVQRVPVTESAGRIHTSAATVAVLPEADEIDVVINENDLRIDIFRSSGPGGQSVNTTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QLQNK +A+++LR +LYE++ +++ E++ R SQ+G+G
Sbjct: 242 SAVRITHLPTGIVVSCQDEKSQLQNKLKAMRILRTRLYEMEEQKRLEELGAARRSQIGSG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+EKIRTYN+ NRVTDHR+ K ++L + LDG ID ++ AA EQ + LE ++
Sbjct: 302 DRSEKIRTYNFPQNRVTDHRINKTVYQLDAVLDGAIDEFIEELAAAEQAQRLEAMS 357
>gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 355
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K+ADPE++S P E+QKL + + L +V +R++K ++E
Sbjct: 1 MIEKLQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELL-DTDLDEDFEKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG +D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEVG 355
>gi|392940166|ref|ZP_10305810.1| LOW QUALITY PROTEIN: peptide chain release factor 1
[Thermoanaerobacter siderophilus SR4]
gi|392291916|gb|EIW00360.1| LOW QUALITY PROTEIN: peptide chain release factor 1
[Thermoanaerobacter siderophilus SR4]
Length = 356
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 253/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP ++SN +E++K + A ++++V YR++K + +E
Sbjct: 1 MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + NDEE+ EM E+ L + +L E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSNDEELKEMAGEELSQLEEKKKKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI++ RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPSDIKIDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q+QN+ RAL++LRAKLYE+ ++EQQ +I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNM 353
>gi|451980716|ref|ZP_21929102.1| Peptide chain release factor RF-1 [Nitrospina gracilis 3/211]
gi|451762052|emb|CCQ90341.1| Peptide chain release factor RF-1 [Nitrospina gracilis 3/211]
Length = 357
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 248/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ K ++ L+ ++DP+V NP+EYQK A+ +EL ++VS YR++K ++QL+E
Sbjct: 1 MFEQLDDIEKRYEKLNNLMSDPKVYGNPAEYQKCAREHSELSDIVSEYREWKRADRQLQE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + E +D E+ EM E++SL E E +LK++LLP DP D +++++E+RAG G
Sbjct: 61 NRKVLDEE-SDRELIEMAREEVESLILRKEEHEAQLKLMLLPKDPRDEKSVIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL RMY +Y+E WK +++SS GG+K ++ I+G YS+LK+E+G
Sbjct: 120 GDEAGLFAADLFRMYSRYAEDRKWKIEVLASSVTGVGGYKEIICNIQGKGAYSRLKFEAG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGR+HTS TVAI+PEA+EV+V I+P D+++ RS G GGQ+VN +
Sbjct: 180 THRVQRVPATETQGRIHTSAVTVAILPEAEEVDVQINPGDLKIDVYRSSGPGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + C +E++Q +NK RAL++LRA+LYE + R QQE + R SQVGTG
Sbjct: 240 SAVRITHVPSGIVVTCQDEKSQHKNKERALKVLRARLYEEEQRRQQEAMAQDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ RVTDHR+ + +LT ++G++D + Q E L++ + S
Sbjct: 300 DRSERIRTYNFPQERVTDHRIGLTLHKLTQIMEGHLDELIDKLVYHYQTEALQKSSAS 357
>gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
Z-2901]
gi|119361519|sp|Q3A928.1|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
Z-2901]
Length = 358
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 250/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ + +++LS ++DPEV+++ +Q ++ AE++E+V YR++K K++E+
Sbjct: 1 MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E D + E++ SE+ L ELE KLK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AERMLDEK-LDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY KY+++ WK ++ S + GGFK V+ I+G VYS++K+ESG
Sbjct: 120 GEEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEA+EVEV I+P D+ + + GAGGQ+VNK E
Sbjct: 180 VHRVQRVPTTESGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVFCASGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK RA+++LRA+L + +EQ+ ++ + R SQVGTG
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAELASARKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + L + L+G++D + + +Q E L+++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTLHRLDAVLEGDLDEIIDALITTDQAERLKQV 354
>gi|376259649|ref|YP_005146369.1| peptide chain release factor 1 [Clostridium sp. BNL1100]
gi|373943643|gb|AEY64564.1| peptide chain release factor 1 [Clostridium sp. BNL1100]
Length = 359
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 245/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++A ++++S KL+DP+V++N EY+K + ++L+E+V YR++ K++EE
Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVTKEIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L + D++ EM+ E + +L ++ +LK+L++P DP D +N+++E+R GAG
Sbjct: 61 ARELLDQT-LDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L R KY+E+ WK ++ S+ E GGFK VV I+G YS+LK+ESG
Sbjct: 120 GEEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PE +EV+V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 180 VHRVQRVPSTESSGRIHTSTITVAVLPEVEEVDVDINPSDLRIDTYRASGAGGQHINKTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTGI + C +ER+Q +NK RA+++LR+KLYEI +Q ++ R SQVGTG
Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQINEVAQDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RVTDHR+ + ++L LDG++D + + +Q E L
Sbjct: 300 DRSERIRTYNYPQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQSEKL 351
>gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
17678]
gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
17678]
Length = 354
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 252/352 (71%), Gaps = 6/352 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ +K+LS K+ADP+++S+ +QKL + +E++ +V YR++ + + E
Sbjct: 1 MLNKLKVLEDKYKELSQKVADPDIISDQPTWQKLMKETSEIEPIVMKYREYSKASQSIAE 60
Query: 114 SRALAKENGNDE--EMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
S+ + +E +++ E+A+M SE ++L L E E +LK+LL+P DP D +N+++E+R G
Sbjct: 61 SKQILEEESDEDLRELAKMELSESEAL---LEEYENELKILLVPKDPNDEKNVIIEIRGG 117
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
AGGDEA ++AGDL RMY +Y+E+ WK +L+SS+E GG+K V IKG YS+LKYE
Sbjct: 118 AGGDEAALFAGDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYE 177
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SGVHRVQR+P TE+ GR+HTSTATVA++PE ++VE+ I+P+D+ + R+ G GGQ VN
Sbjct: 178 SGVHRVQRIPTTESGGRIHTSTATVAVLPEVEDVEIDINPEDVRVDVFRASGNGGQCVNT 237
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
++A+ L H PTG + C +E++QL+NK +A+++L+A+LY+ + EQQ+ I +R SQVG
Sbjct: 238 TDSAVRLTHIPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQQKDIAAERKSQVG 297
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
TG R+E+IRTYN+ RV+DHR+ + ++L SF+DG++D + + ++Q E
Sbjct: 298 TGDRSERIRTYNFPQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITVDQTE 349
>gi|417644436|ref|ZP_12294426.1| peptide chain release factor 1 [Staphylococcus warneri VCU121]
gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121]
Length = 358
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + ++ L+ L+DP+VV++ + +K ++ AEL + V YR +K +++L +
Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E SL NEL E+EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLNETSDKEEI-EMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E + +K ++ SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L+ ++GN+D + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLSQIMEGNLDEIIDALTLSEQTDKLKEL 353
>gi|427393454|ref|ZP_18887232.1| peptide chain release factor 1 [Alloiococcus otitis ATCC 51267]
gi|425730672|gb|EKU93506.1| peptide chain release factor 1 [Alloiococcus otitis ATCC 51267]
Length = 366
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 246/356 (69%), Gaps = 1/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ +++L+ L+DP+V+++ + KL++ A+L E V Y ++K+ ++ ++E
Sbjct: 7 IFDRLEAVDARYEELNELLSDPQVINDTDRFMKLSKEEADLRETVQVYGRYKEVKEGIQE 66
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ D+EMA++ E+ L +E ELE+KL +LLLP D D RNI++E+R AG
Sbjct: 67 TENMLSDSDLDKEMADLAKEELSDLKSEQDELEDKLTILLLPKDENDERNIIMEIRGAAG 126
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MY+KY+E W+ ++ S+ + GGFK ++ I GN VYSKLK+E+G
Sbjct: 127 GDEAQLFAGDLFEMYRKYAENQGWRVEVLDSNTSGVGGFKEIIFSIDGNNVYSKLKFENG 186
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+QGR+HTSTATV +MPEA++VE+ IDP DI + GAGGQ+VNK
Sbjct: 187 AHRVQRVPETESQGRIHTSTATVVVMPEAEDVEIDIDPNDIRTDIYHASGAGGQHVNKTA 246
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H+PTGI + +ER+QL+N+ +A+++LR+++Y+ EQQ + +R S VGTG
Sbjct: 247 SAVRLTHEPTGIVVAMQDERSQLKNREKAMKVLRSRVYDKIQSEQQAEFDAERKSAVGTG 306
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ +RVTDHR+ + + L LDG++ + EQ E LE+L+
Sbjct: 307 DRSERIRTYNFPQSRVTDHRINLTLQKLDQILDGDLGQIIDELIVWEQTEKLEQLS 362
>gi|395239379|ref|ZP_10417259.1| Peptide chain release factor 1 [Lactobacillus gigeriorum CRBIP
24.85]
gi|394476474|emb|CCI87236.1| Peptide chain release factor 1 [Lactobacillus gigeriorum CRBIP
24.85]
Length = 362
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ + Y ++++ A+L EVV YR++K +++ +
Sbjct: 4 VMARLEGLVAHYEELQEMMADPEVINDTNRYMEISKEEADLREVVEKYRQYKSDLQEISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N +D E+ EM E L E+ ELEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIS-NESDPELVEMAKEENNDLETEVAELEERIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+EQ W+ +L+ S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAEQQGWQISLVDSEMTEVGGYKRVAVMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + +++ +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDQYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G ++ + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELNEIIDALILYNQTKQLEELAD 359
>gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
6725]
gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
2002]
gi|254790859|sp|B9MR68.1|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
6725]
gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
2002]
Length = 355
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K++DPE++S P E+QKL + + L +V +R++K ++E
Sbjct: 1 MIEKLQVIEEKYLELEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILDTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELL-DTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG +D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQILDGELDEIIDALITHFQTERLKEIG 355
>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
gi|345887299|ref|ZP_08838489.1| peptide chain release factor 1 [Bilophila sp. 4_1_30]
gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
gi|345041960|gb|EGW46078.1| peptide chain release factor 1 [Bilophila sp. 4_1_30]
Length = 356
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 246/358 (68%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + + DL +LADP V ++ Y+KL ++ ++L VV +R++++ ++ L +
Sbjct: 1 MFAKLESLERKFLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L N D ++ EM EIKS+ +L ELE LKVLLLP+DPLD +NI+LE+RAG G
Sbjct: 61 NQELL--NDADPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++ GDL RMY +Y+E+ WK ++S SE++ GG+K V+ I G++VYS+LK+ESG
Sbjct: 119 GEEAALFGGDLFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS ATVAIMPEA+EV++ + P+D+ RS G GGQ+VN +
Sbjct: 179 THRVQRVPATESQGRIHTSAATVAIMPEAEEVDLDLKPEDLRFDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +NK++ L++L ++L ++K EQ + QR +QVGTG
Sbjct: 239 SAVRVTHIPTGLVVCCQDEKSQHKNKAKGLKILCSRLLQMKQDEQNAALADQRRAQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ RVTDHR+ + + L L+G I V + Q E L+ A S
Sbjct: 299 DRSERIRTYNFPQGRVTDHRINLTLYSLGKVLEGEIQELVDALVTHAQTEALKAQASS 356
>gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
champanellensis 18P13]
Length = 361
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 238/348 (68%), Gaps = 1/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ + ++++S +L+DP V ++ + Y +L + L+ +V YR +K + ++E
Sbjct: 1 MFEKLQIMEQKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L D E+ EM +E ++ +L E E+LK+LLLP DP D RN+++E+R GAG
Sbjct: 61 ARELLDAGSEDPELREMAQAEFETEKEQLAEYAEQLKILLLPKDPNDDRNVIIEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A L RMY Y+E WK ++S++ E GGFK + I G YS+LKYESG
Sbjct: 121 GEEAALFANSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGR+HTST TVA++ EADEVE+ I+P D+++ RS GAGGQ++NK E
Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVLVEADEVELAINPTDLKIDVFRSSGAGGQHINKTE 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+Q +NK RA+ +LR++LYE +EQQ+KI +QR QVGTG
Sbjct: 241 SAVRITHLPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQDKIASQRRMQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+E+IRTYN+ R+TDHR+ + + L ++GN+D + + A +Q
Sbjct: 301 DRSERIRTYNFPQGRLTDHRIGLTIYRLEDVMNGNLDEVLDALATADQ 348
>gi|365853802|ref|ZP_09394067.1| peptide chain release factor 1 [Lactobacillus parafarraginis F0439]
gi|363711960|gb|EHL95666.1| peptide chain release factor 1 [Lactobacillus parafarraginis F0439]
Length = 361
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 245/355 (69%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ ++DPEV+++ ++ KL++ A+L + V+ Y K+K KQL++
Sbjct: 4 IFDQLQAVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAYNKYKKVSKQLDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ M+ EI ++ +LE++LKV+LLP DP D +NI++E+ AG
Sbjct: 64 DEEMLREKIDDADLESMVKDEIADFKDQKQKLEDQLKVMLLPKDPNDDKNIIMEIHGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE ++A DL MY KY+E+ W+ +I +E E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWQVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYENG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q++ +R S +GTG
Sbjct: 244 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYSQQEQDQYNAERKSAIGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D+ + + +Q + LE L
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMNGELDDIIDALIVSDQAKKLENL 358
>gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
Length = 359
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 245/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++A ++++S KL+DP+V++N EY+K + ++L+E+V YR++ K++EE
Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L + D++ EM+ E + +L ++ +LK+L++P DP D +N+++E+R GAG
Sbjct: 61 ARELLDQT-LDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L R KY+E+ WK ++ S+ E GGFK VV I+G YS+LK+ESG
Sbjct: 120 GEEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PE +EV+V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 180 VHRVQRVPSTESSGRIHTSTITVAVLPEVEEVDVDINPNDLRIDTYRASGAGGQHINKTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H P+GI + C +ER+Q +NK RA+++LR+KLYEI +Q ++ R SQVGTG
Sbjct: 240 SAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQINEVAQDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RVTDHR+ + ++L LDG++D + + +Q E L
Sbjct: 300 DRSERIRTYNYPQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQSEKL 351
>gi|385808994|ref|YP_005845390.1| protein chain release factor A [Ignavibacterium album JCM 16511]
gi|383801042|gb|AFH48122.1| Protein chain release factor A [Ignavibacterium album JCM 16511]
Length = 359
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 249/353 (70%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + + ++ ++PE ++NP + L + +E+++VV Y K+ K +E
Sbjct: 3 FLDKLEKVKQRYDQINELYSNPEYINNPEKMIALNKEKSEIEDVVQVYEKYVKILKDIEG 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N ++E+ +M +E+ L+ + +LEE++KVLLLP DP D +N+++E+RAG G
Sbjct: 63 NKEIIN-NSTEKELVDMAYAEMDELNAQKEKLEEEIKVLLLPKDPNDDKNVIMEIRAGTG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E WK +I +E GG K V++ + G+ VY LKYESG
Sbjct: 122 GEEAALFANDLFRMYTRYAEIRGWKYEIIDLNETGLGGIKEVILSVSGDNVYGDLKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TEA GRVHTS A+VA++PE ++VEV I+P D+++ RSGGAGGQNVNKVE
Sbjct: 182 VHRVQRVPETEASGRVHTSAASVAVLPEVEDVEVEINPNDLKIDIFRSGGAGGQNVNKVE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI + C +ER+QL+N+ +A+++L+A+LY++++R+Q E+I QR SQV +G
Sbjct: 242 TAVRITHLPTGIVVQCQDERSQLKNRQKAMKVLKARLYDMEMRKQMEQISAQRKSQVRSG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+EKIRTYN+ NRVTDHR+ + + L++ ++G +DN ++ ++ E L+
Sbjct: 302 DRSEKIRTYNFPQNRVTDHRIGLTLYNLSNIMEGQLDNLIEQLKLADKAEKLQ 354
>gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 360
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 249/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL + +LSVK++DP ++ N +E++KL + A+L+ +V+ Y+++K + L+
Sbjct: 2 LLDKLAFIENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQV 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + +D EM EM+ EI SLS IELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSDE-SDREMKEMLNEEISSLSEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E+ W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GDEAALFAYNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PE D+VE+ I KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTVTVAVLPEVDDVEIEIADKDVRIDVFRASGHGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LR++L+E +E+ + I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERADGIAADRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ + ++L SFLDG + + + +Q E ++++ +
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQAEKMQKMGNT 358
>gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
Length = 359
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 256/361 (70%), Gaps = 4/361 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M++ L K E AK K++ KLA PEV +NP + Q+LA+ L VV + ++++ E
Sbjct: 1 MSKKLLGKKSELEAK-LKEVEEKLASPEVANNPKQLQELAKEHKHLAYVVELFNRYENIE 59
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K ++E++ L + DEEM + E+++L ++ +LE ++++ L+P DP D +N++LE+
Sbjct: 60 KSIKETKELL--HSQDEEMRLLAEEELENLKSQKEKLESEIQIALIPKDPNDDKNVILEI 117
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
R GAGGDEA ++A +L RMYQ+Y+E+N WK ++S E E+GG K V+ IKG YSKL
Sbjct: 118 RQGAGGDEAALFAAELFRMYQRYAEKNGWKVEILSLHENERGGIKEVIALIKGEGAYSKL 177
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP+TE+ GR+HTSTATVA++PEA+EV+V I+P D+++ T R+ GAGGQ+
Sbjct: 178 KYESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDVEINPDDLKIETMRASGAGGQH 237
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ++A+ + H PTGI + C +ER+QLQN+++A+Q+LRA+L + R QQEKI+++R S
Sbjct: 238 VNTTDSAVRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRIQQEKIKSERKS 297
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG R+EKIRTYN+ NRVTDHR+ + + LDG +D + +Q+E L L
Sbjct: 298 QVGTGDRSEKIRTYNFPQNRVTDHRIGYTSHRINEILDGELDEIIDQLILKDQEEKLSSL 357
Query: 408 A 408
+
Sbjct: 358 S 358
>gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
Length = 362
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 249/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A++ EVV YRK+K K++++
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D+++ EM E L E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISSE-SDDDLVEMAKEENFELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E WK +LI S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + ++K +R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDKYDAKRKDAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LE++AE
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIINALVLYYQTQQLEKMAE 359
>gi|397904185|ref|ZP_10505106.1| Peptide chain release factor 1 [Caloramator australicus RC3]
gi|343178932|emb|CCC58005.1| Peptide chain release factor 1 [Caloramator australicus RC3]
Length = 356
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 261/357 (73%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ + +++LS K++DPE++++ + +QKL + L+E+V YR++K K+++E
Sbjct: 1 MLEKLDFIEEKYEELSKKISDPEIIADNNLFQKLCKEHNSLEEIVLKYREYKTILKRIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L E+ D EM +++ E+K LS E +E++LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 DKELL-EDDIDREMKDLVEEELKELSEEKERVEKELKLLLLPKDPNDEKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+E++++K L+SSS + GG+K V+ +KG YSKLKYESG
Sbjct: 120 GDEAALFAADLYRMYTRYAERHNFKTELVSSSPNDLGGYKEVIFMVKGQGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE D+VEV I+P D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPVTEAGGRIHTSTATVAVLPEVDDVEVEINPNDLRIDVFRSSGHGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+N+ +A+++L+AKLYEI++ +Q+ +I +R SQVGTG
Sbjct: 240 SAVRITHIPTGIVVSCQDEKSQLKNREKAMKILKAKLYEIELEKQRSQIAAERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ + ++L SFLDG ID + + +Q E L+E+ E
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTIYQLESFLDGEIDEVIDALITADQAEKLKEVGE 356
>gi|395244718|ref|ZP_10421672.1| Peptide chain release factor 1 [Lactobacillus hominis CRBIP 24.179]
gi|394482924|emb|CCI82680.1| Peptide chain release factor 1 [Lactobacillus hominis CRBIP 24.179]
Length = 362
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A++ EVV YRK+K +K++ +
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKADQKEIAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N +D ++ EM E L E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIS-NESDNDLVEMAKEENSDLEKEVTELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E W ++I S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAETQGWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + ++ +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDSYDEKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LE++AE
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIINALVLYYQTQQLEKMAE 359
>gi|418326961|ref|ZP_12938136.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU071]
gi|418413304|ref|ZP_12986546.1| peptide chain release factor 1 [Staphylococcus epidermidis
BVS058A4]
gi|420164484|ref|ZP_14671213.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM095]
gi|420169228|ref|ZP_14675831.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM087]
gi|420186327|ref|ZP_14692398.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM040]
gi|365224067|gb|EHM65337.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU071]
gi|394231589|gb|EJD77215.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM095]
gi|394231691|gb|EJD77315.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM087]
gi|394252544|gb|EJD97576.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM040]
gi|410879191|gb|EKS27042.1| peptide chain release factor 1 [Staphylococcus epidermidis
BVS058A4]
Length = 358
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L++
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E +L EL E+EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLNETSDKEEV-EMLKEESSALKTELPEMEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE++ GG+K V + G YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++GN+D V++ EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQTEKLKEL 353
>gi|348027434|ref|YP_004767239.1| peptide chain release factor 1 [Megasphaera elsdenii DSM 20460]
gi|341823488|emb|CCC74412.1| peptide chain release factor 1 [Megasphaera elsdenii DSM 20460]
Length = 362
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 249/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+++ + DL +++DP V++ E+QKL + A L +V T+RK++D ++
Sbjct: 4 FMDKVQAVENKFMDLEQQISDPSVIARQDEWQKLTKEHASLMPIVETFRKYEDITSTIDG 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + + +D ++ M E+ L+ E +LE++L VL+LP DP D +N+++E+RAGAG
Sbjct: 64 DKEIIDDPDSDNDLIAMAKEEMNGLTKEQADLEDQLHVLMLPKDPRDDKNVIMEIRAGAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++AGDL RMY KY E Q WK ++ISS+ E GGFK VV ++G+ VY KLKYES
Sbjct: 124 GDEAALFAGDLFRMYMKYIEKQPGWKTSIISSNAPELGGFKEVVFSVEGSGVYGKLKYES 183
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEA GR+HTSTATVA++PEA++VE+ ++ D+ + R+ GAGGQ+VNK
Sbjct: 184 GVHRVQRVPVTEAGGRIHTSTATVAVLPEAEDVEIDLNMDDVRVDYFRASGAGGQHVNKT 243
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H PTG+ + C +ER+QL+N+++AL++L+A+L + ++ ++ +R SQVGT
Sbjct: 244 SSAVRMTHIPTGMVVECQDERSQLENRAKALRVLKARLLDQAQQKADAELTEERRSQVGT 303
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R+E+IRTYN+ RVTDHR+ + ++L + L+G+ID +Q+ A + EL++E
Sbjct: 304 GDRSERIRTYNFPQGRVTDHRINLTLYKLDNILNGDIDEFIQALAEARRAELMKE 358
>gi|410729146|ref|ZP_11367228.1| peptide chain release factor 1 [Clostridium sp. Maddingley
MBC34-26]
gi|410596157|gb|EKQ50842.1| peptide chain release factor 1 [Clostridium sp. Maddingley
MBC34-26]
Length = 360
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 246/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ +LE + +LSVK++DP ++ N +E++KL + A+L+ +V+ YR +K + L+
Sbjct: 2 LLDRLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYRDYKKVTEDLKA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D EM EM+ EI L+N ELE ++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSSE-SDREMREMLNEEITDLTNREAELEREIQILLLPKDPNDDKNVFIEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GEEAALFAYNLFRMYTRYAETQRWATEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+VE+ + KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEVLDKDVRIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE RE+ E I R SQVGTG
Sbjct: 241 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEQAERERAEGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ + ++L +FL G++D + + +Q E ++ + +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLDTFLAGDLDEMINALITADQAEKMKSMGNT 358
>gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
gi|28201874|sp|Q8KG45.1|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
Length = 357
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/354 (46%), Positives = 244/354 (68%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S ++ + +L+DPEVV++ + ++KL + + L E+V Y ++ +KQL+E
Sbjct: 1 MFDKLQSIKDKFQTIEQQLSDPEVVADQNRFRKLNKEYSSLKEIVRAYDEWSRTKKQLDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ ++ K N ND EM ++ E L L +LE++LK+LLLP D D+RN ++E+RAG G
Sbjct: 61 AHSMQK-NENDPEMRALVEEEAGELQERLPKLEQQLKILLLPKDEADSRNAIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
GDEAG++A DL+RMYQ+Y+E+ W C + SE G K V +E+ G+ VY LK+ES
Sbjct: 120 GDEAGLFAADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP+TE QGR+HTS A+VA++PEA+EV+V I +D+ + T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRKEDLLIDTFRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H P+GI + C EER+QLQN+ RA+++LR+KLY++++ EQQ+ R S V T
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADLRRSMVTT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+ KIRTYN+ +RVTDHR+ + L + G +D +++ +Q E L+
Sbjct: 300 GDRSAKIRTYNFPQSRVTDHRIGFTSHALPQIMQGELDPLIEALRMHDQAERLQ 353
>gi|417837829|ref|ZP_12484067.1| peptide chain release factor 1 [Lactobacillus johnsonii pf01]
gi|338761372|gb|EGP12641.1| peptide chain release factor 1 [Lactobacillus johnsonii pf01]
Length = 362
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 250/358 (69%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A++ EVV YRK+K K++++
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDD 63
Query: 114 SR-ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
++ ++ E+ ND + EM E L E+ ELE+++K+L+LP DP D ++I++E+R A
Sbjct: 64 NKEIISTESDND--LVEMAKEENSELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAA 121
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA ++AGDL+RMY+KY+E WK +LI S E GG+K V + I G++VYSKLKYE+
Sbjct: 122 GGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVTVMITGDKVYSKLKYEN 181
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
G HRVQRVP TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 182 GAHRVQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKT 241
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + +++ +R VGT
Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDQYDAKRKESVGT 301
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LE++AE
Sbjct: 302 GDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIINALVLYYQTQQLEKMAE 359
>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
ASO3-1]
Length = 356
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/346 (46%), Positives = 245/346 (70%), Gaps = 7/346 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ + + + L+DPEV SN +Y+KL++S +EL +VSTYR+++ ++EE
Sbjct: 1 MFAKLDELEQQYMQIETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R LA++ D E+ E+ +E+++L E LEE LK+ L+PSDPLD +NI+LE+RAG G
Sbjct: 61 NRELARDR--DPEIRELAQAELETLQEEKDRLEEDLKIQLVPSDPLDDKNIILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ SWK +++ E GG K V+ I G +VYS+LKYESG
Sbjct: 119 GEEAALFAADLFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS TVAI+PEA+EV+V I+P D+ + R+ G GGQ+VN +
Sbjct: 179 VHRVQRVPETESQGRVHTSAVTVAILPEAEEVDVNIEPNDLRVDVFRASGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +N+++AL++LR++L +I EQ+ + R +QVG+G
Sbjct: 239 SAVRITHIPTGLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEEEQKREYDDNRRAQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKM---NFE--LTSFLDGNIDNAVQS 394
R+E+IRTYN+ +RVTDHR+ + N E + LDG ID VQ+
Sbjct: 299 DRSERIRTYNFPQSRVTDHRINLTLYNLESVMQGHLDGIIDPLVQN 344
>gi|436842689|ref|YP_007327067.1| peptide chain release factor 1 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432171595|emb|CCO24968.1| peptide chain release factor 1 [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 356
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 249/357 (69%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++ DL +LADPEV +N Y+K+ + +EL EVV+ +R++K LE+
Sbjct: 1 MFAKLEEIERSFMDLEQELADPEVYNNQERYKKVTIAHSELGEVVNAFREYKQLASDLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ +AK++ D E+ EM EI + L LE++LK LLLP DP+D +NI+LE+RAG G
Sbjct: 61 NKEMAKDS--DPEIREMAEMEIAEIKERLPRLEDELKFLLLPKDPMDGKNIILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++ DL RMY +Y+EQN WK ++SS+ GGFK ++ + G+R+YS++KYESG
Sbjct: 119 GEEAALFGADLFRMYSRYAEQNGWKVEVLSSNPTGTGGFKEIIAAVSGSRIYSRMKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGR+HTS ATVAIMPEA+E++V + +D+ + R+ G GGQ+VN +
Sbjct: 179 THRVQRVPATETQGRIHTSAATVAIMPEAEEIDVQVRNEDLRVDVFRASGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +E++Q +NK++A+++L ++L + + +Q E++ QR +QVG+G
Sbjct: 239 SAIRITHIPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQQEQDKQHEEMAEQRRAQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ + ++L S ++G++ V + + Q E L++ AE
Sbjct: 299 DRSERIRTYNFPQGRVTDHRINLTLYKLDSVIEGDMGELVDALVSHYQSEALKKQAE 355
>gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323]
gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
gi|420148452|ref|ZP_14655720.1| Peptide chain release factor 1 (RF-1) [Lactobacillus gasseri CECT
5714]
gi|122273179|sp|Q042K5.1|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
gasseri ATCC 33323]
gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
gi|398400004|gb|EJN53600.1| Peptide chain release factor 1 (RF-1) [Lactobacillus gasseri CECT
5714]
Length = 362
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 249/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A++ EVV YRK+K K++++
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D+++ EM E L E+ +LE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISSE-SDDDLVEMAKEENSELEKEVAKLEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E WK +LI S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + ++K +R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDKYDAKRKDAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LE++AE
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIINALVLYYQTQQLEKMAE 359
>gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
FI9785]
gi|385826154|ref|YP_005862496.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026]
gi|61214647|sp|Q74K25.1|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
FI9785]
gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026]
Length = 362
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 250/358 (69%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A++ EVV YRK+K K++++
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDD 63
Query: 114 SR-ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
++ ++ E+ ND + EM E L E+ ELE+++K+L+LP DP D ++I++E+R A
Sbjct: 64 NKEIISTESDND--LVEMAKEENSELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAA 121
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA ++AGDL+RMY+KY+E WK +LI S E GG+K V + I G++VYSKLKYE+
Sbjct: 122 GGDEASLFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYEN 181
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
G HRVQRVP TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 182 GAHRVQRVPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKT 241
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + +++ +R VGT
Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRDQYDAKRKESVGT 301
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LE++AE
Sbjct: 302 GDRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIINALVLYYQTQQLEKMAE 359
>gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
17B]
gi|238691625|sp|B2TJY5.1|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
17B]
Length = 360
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 250/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL + +LSVK++DP ++ N +E++KL + A+L+ +V+ Y+++K + L+
Sbjct: 2 LLDKLAFIENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQV 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + +D EM EM+ EI SLS +ELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSDE-SDREMKEMLNEEIASLSQREVELEKEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GEEAALFAYNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PE D+VE+ I KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTVTVAVLPEVDDVEIEIADKDVRIDVFRASGHGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LR++L+E +E+ + I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERADGIAADRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ + ++L SFLDG++ + + +Q E ++++ S
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLDSFLDGDVQEMINALITADQAEKMQKMGNS 358
>gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1)
[butyrate-producing bacterium SS3/4]
Length = 357
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 247/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + +++L ++L +P V + +++KL + A+L +V Y+++K ++ +E+
Sbjct: 1 MFDRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL E +DEEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLALLDEE-SDEEMKELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y+E WK +I+ SE+ GG K V I G+ YSKLKYESG
Sbjct: 120 GDEAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVAIMPEA+E +VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAIMPEAEEFDVVIDDKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ +Q + +R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNEEAAERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+K+ +++ + +DG+I + S A +Q L ++ E+
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIAADQAAKLAKMNEN 357
>gi|408411439|ref|ZP_11182598.1| Peptide chain release factor 1 [Lactobacillus sp. 66c]
gi|409351084|ref|ZP_11233931.1| Peptide chain release factor 1 [Lactobacillus equicursoris CIP
110162]
gi|407874448|emb|CCK84404.1| Peptide chain release factor 1 [Lactobacillus sp. 66c]
gi|407876984|emb|CCK85989.1| Peptide chain release factor 1 [Lactobacillus equicursoris CIP
110162]
Length = 361
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 252/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES ++++ +ADPEV+++ Y ++ + AE+ EVV +RK+K ++++
Sbjct: 4 VMAQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEAEMREVVQKFRKYKADKEEIAG 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +G+D E+ EM E L +E+++LE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-DGSDAELVEMAKMENSELEDEVVKLEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E W +++ S + E GG+K V + I GN+VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAETQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + ++ +R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDSYDAKRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALTVYYQTKQLEELAEN 360
>gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
Alaska E43]
gi|238689644|sp|B2UZI5.1|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
Alaska E43]
Length = 360
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 249/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL + +LSVK++DP ++ N +E++KL + A+L+ +V+ Y+++K + L+
Sbjct: 2 LLDKLAFIENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQV 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + +D EM EM+ EI SL+ IELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSDE-SDREMKEMLNEEISSLAEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E+ W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GDEAALFAYNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PE D+VE+ I KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTVTVAVLPEVDDVEIEIADKDVRIDVFRASGHGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LR++L+E +E+ + I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERADGIAADRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ + ++L SFLDG + + + +Q E ++++ +
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQAEKMQKMGNT 358
>gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
OB47]
gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
OB47]
Length = 355
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K+ADPE++S E+QKL + + L +V +R++K ++E
Sbjct: 1 MIEKLQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELL-DTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALITHFQTEKLKEVG 355
>gi|392407018|ref|YP_006443626.1| peptide chain release factor 1 [Anaerobaculum mobile DSM 13181]
gi|390620154|gb|AFM21301.1| peptide chain release factor 1 [Anaerobaculum mobile DSM 13181]
Length = 358
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/349 (48%), Positives = 255/349 (73%), Gaps = 3/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE + +++L +KL DP+V+SNP+E Q+LA+ +EL ++V YR++K+ K+LEE+ +
Sbjct: 7 KLEELERKFQELELKLGDPQVISNPAELQRLAKEHSELSKIVEKYRQYKETLKRLEEAMS 66
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L E DEE+ E+ E+ L LE++L +LLLP DP D R++++E+RAGAGG+E
Sbjct: 67 LFDEE--DEELRELAKEEVAHLRQAAENLEKELALLLLPKDPNDDRSVIVEIRAGAGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +Y+E+ WK LI+++E GG+K +V ++G+ +S LKYESGVHR
Sbjct: 125 AALFAADLYRMYVRYAERKGWKVELITANETGIGGYKEIVFRVEGHGAFSALKYESGVHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTSTATVA++PE DEV+V I P+D+ + T R+ GAGGQ VN ++A+
Sbjct: 185 VQRVPVTEASGRIHTSTATVAVLPEPDEVDVEIRPEDLRIDTFRASGAGGQYVNMTDSAV 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI + C +ER+QL+N+ +A+QLLRAKLY++K+++QQE++ ++R Q+G+G R+
Sbjct: 245 RITHIPTGIVVSCQDERSQLKNRVKAMQLLRAKLYDLKLQQQQEEMASERRGQIGSGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ NRVTDHR+ + L LDG++D V + A +Q E L
Sbjct: 305 ERIRTYNFPQNRVTDHRIGLTLHNLEEILDGDLDELVYALATADQMEKL 353
>gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88]
gi|32171526|sp|Q898Y5.1|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88]
Length = 355
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 257/356 (72%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS+K++DP V+ + E+QKL + ++++ +V+TY+++K+ + +E+
Sbjct: 1 MLDRLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + KE+ ++E+ +M+ +IK L + ELE++LK+LL+P DP D +N+ +E+RAGAG
Sbjct: 61 NKEMLKED-IEQELRDMVQEDIKELEQRVQELEQELKMLLVPKDPNDEKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E+++WK +S +E + GGFK +V ++G YS+LKYESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++V+V I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVEDVDVEINQNDLRVDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++L+++LY++ E+ I R SQVGTG
Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESERSASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVTDHR+ + ++L SFLDG+I+ + +EQ E +++++
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQSERMKDIS 355
>gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016]
gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 367
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 155/365 (42%), Positives = 252/365 (69%), Gaps = 2/365 (0%)
Query: 45 KLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKF 104
K++ ++ ++ +L +++LS+K++DP ++++ ++QKL + AEL+E+V YR++
Sbjct: 2 KILIRSDKIMLERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREY 61
Query: 105 KDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNI 164
K+ + LE+++ + +E D++M EM EIK L + + + E++LK+LLLP DP D +N+
Sbjct: 62 KEALQDLEDNKEMLREE-TDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNV 120
Query: 165 MLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRV 224
+E+R GAGG+EA ++A +L RMY +Y+E WK IS S + GGFK +V +KG
Sbjct: 121 FVEIRGGAGGEEAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDA 180
Query: 225 YSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGA 284
YS+LKYESG HRVQRVP TE+ GR+HTSTATVA++PE D+V++V++ DI + R+ G
Sbjct: 181 YSRLKYESGTHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIVVNQNDIRIDVFRASGH 240
Query: 285 GGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRT 344
GGQ VN ++A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE E+ I
Sbjct: 241 GGQCVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERNASIAE 300
Query: 345 QRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKEL 403
R +QVGTG R+E+IRTYNY RVTDHR+ M ++L SFL+G+ID + + +Q +
Sbjct: 301 DRKNQVGTGDRSERIRTYNYPQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQAQK 360
Query: 404 LEELA 408
++ +
Sbjct: 361 MKSIG 365
>gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
gi|254790874|sp|B8I562.1|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
Length = 359
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 245/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++A ++++S KL+DP+V++N EY+K + ++L+E+V YR++ K++EE
Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L E D++ EM+ E + +L ++ +LK+L++P DP D +N+++E+R GAG
Sbjct: 61 ARELL-EQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L R KY+E+ WK ++ S+ E GGFK VV I+G YS+LK+ESG
Sbjct: 120 GEEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PE +EV+V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 180 VHRVQRVPSTESSGRIHTSTITVAVLPEVEEVDVDINPSDLRIDTYRASGAGGQHINKTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTGI + C +ER+Q +NK +A+++LR+KLYEI +Q ++ R +QVGTG
Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLYEIAQEQQINEVAQDRKNQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RVTDHR+ + ++L LDG++D + + +Q E L
Sbjct: 300 DRSERIRTYNYPQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQSEKL 351
>gi|404369826|ref|ZP_10975154.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
Length = 361
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 248/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL + +LSVK++DP +++N +E++KL + A+L+ +V+ Y++++ L
Sbjct: 2 LLDKLAFIENKYDELSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLAA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E +D EM EM++ EI L+ ELE+ +++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLAEE-SDREMREMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E W L+S++E + GGFK VV IKG+ YSKLKYESG
Sbjct: 121 GDEAALFAANLFRMYTRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+VE+ I+ KD+ + RS G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINEKDLRIDVYRSSGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++LR++LYE E+ I R SQVG+G
Sbjct: 241 SAVRITHIPTGVVVACQDEKSQLKNKEKAMKVLRSRLYEAAEAERNAGIAEDRKSQVGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ + ++L S+L+G+I+ + + +Q E ++++ +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLESYLNGDIEEVINALITADQAEKMKKMGNT 358
>gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Chlorobium phaeovibrioides DSM 265]
gi|189039984|sp|A4SCF1.1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
phaeovibrioides DSM 265]
Length = 357
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 238/354 (67%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L+S + DL LADP+ + + ++KL + ++L E+V TY ++ +KQLE+
Sbjct: 1 MFDNLQSIKERHLDLERLLADPDAAGDQTRFRKLNKEYSDLREIVETYDRYSHIKKQLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L K N D+EM ++ EI+ L ++ LE+++KVLLLP D D+RN++LE+RAG G
Sbjct: 61 SRQLLK-NEQDQEMKALVEEEIEELQRQIPALEQEIKVLLLPKDEADSRNVILEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
G+EA ++ DL RMYQ+Y+E+ W ++ +E+ GGF+ + I G+ V+ +KYES
Sbjct: 120 GEEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVFGTMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+HTS A+VA++PEA+EV+V I +D+ L T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRKEDLRLDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H PTG+ C EER+QLQNK RA+++LRAKL++I++ EQQ+ R + V T
Sbjct: 240 ETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQARADLRRTMVAT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+ KIRTYNY +RVTDHR+ L F+ G I + + +Q E L+
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTTHALPQFMQGEIGELIDALKMHDQTERLQ 353
>gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC
12228]
gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646882|ref|ZP_12296734.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
gi|417656917|ref|ZP_12306595.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
gi|417660256|ref|ZP_12309845.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
gi|417909017|ref|ZP_12552767.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU037]
gi|417912470|ref|ZP_12556162.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU105]
gi|417913921|ref|ZP_12557582.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU109]
gi|418604057|ref|ZP_13167424.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU041]
gi|418607532|ref|ZP_13170762.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU057]
gi|418609372|ref|ZP_13172525.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU065]
gi|418613195|ref|ZP_13176211.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU117]
gi|418617908|ref|ZP_13180794.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU120]
gi|418622347|ref|ZP_13185099.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU123]
gi|418623907|ref|ZP_13186601.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU125]
gi|418627641|ref|ZP_13190213.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU126]
gi|418629960|ref|ZP_13192453.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU127]
gi|418663751|ref|ZP_13225260.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU081]
gi|419768484|ref|ZP_14294606.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771604|ref|ZP_14297655.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-K]
gi|420166561|ref|ZP_14673245.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM088]
gi|420171719|ref|ZP_14678254.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM070]
gi|420173643|ref|ZP_14680134.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM067]
gi|420182089|ref|ZP_14688231.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM049]
gi|420186950|ref|ZP_14692974.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM039]
gi|420195935|ref|ZP_14701719.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM021]
gi|420202831|ref|ZP_14708419.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM018]
gi|420207939|ref|ZP_14713424.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM008]
gi|420210298|ref|ZP_14715727.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM003]
gi|420215230|ref|ZP_14720501.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH05005]
gi|420216735|ref|ZP_14721933.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH05001]
gi|420220977|ref|ZP_14725932.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH04008]
gi|420223650|ref|ZP_14728545.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH08001]
gi|420226177|ref|ZP_14730999.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH06004]
gi|420228591|ref|ZP_14733340.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH05003]
gi|420230977|ref|ZP_14735654.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH04003]
gi|420233583|ref|ZP_14738191.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH051668]
gi|420236013|ref|ZP_14740544.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH051475]
gi|421608826|ref|ZP_16050038.1| peptide chain release factor 1 [Staphylococcus epidermidis AU12-03]
gi|32171533|sp|Q8CNI7.1|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71153098|sp|Q5HMA4.1|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC
12228]
gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
gi|341650682|gb|EGS74498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU105]
gi|341654379|gb|EGS78126.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU109]
gi|341654657|gb|EGS78396.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU037]
gi|374404386|gb|EHQ75360.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU057]
gi|374405853|gb|EHQ76764.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU041]
gi|374407774|gb|EHQ78622.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU065]
gi|374411289|gb|EHQ82006.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU081]
gi|374816631|gb|EHR80832.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU117]
gi|374817169|gb|EHR81355.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU120]
gi|374826941|gb|EHR90816.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU123]
gi|374829087|gb|EHR92901.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU126]
gi|374829151|gb|EHR92964.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU125]
gi|374832479|gb|EHR96189.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU127]
gi|383359848|gb|EID37258.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-250]
gi|383361102|gb|EID38484.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-K]
gi|394233568|gb|EJD79169.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM088]
gi|394236834|gb|EJD82337.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM070]
gi|394239680|gb|EJD85115.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM067]
gi|394250553|gb|EJD95735.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM049]
gi|394256916|gb|EJE01840.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM039]
gi|394262536|gb|EJE07298.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM021]
gi|394269010|gb|EJE13555.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM018]
gi|394274959|gb|EJE19354.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM008]
gi|394276532|gb|EJE20870.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM003]
gi|394282510|gb|EJE26703.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH05005]
gi|394285427|gb|EJE29506.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH04008]
gi|394287148|gb|EJE31115.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH08001]
gi|394291414|gb|EJE35226.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH05001]
gi|394292663|gb|EJE36403.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH06004]
gi|394294625|gb|EJE38296.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH05003]
gi|394295860|gb|EJE39496.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH04003]
gi|394299865|gb|EJE43393.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH051668]
gi|394301649|gb|EJE45104.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIH051475]
gi|406655479|gb|EKC81906.1| peptide chain release factor 1 [Staphylococcus epidermidis AU12-03]
Length = 358
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L++
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E +L EL ++EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLNETSDKEEV-EMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE++ GG+K V + G YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++GN+D V++ EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQTEKLKEL 353
>gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
Length = 361
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 248/359 (69%), Gaps = 3/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
I K+++ + DL +++DP V++ E+QKL + A L ++ T+RK+KD + +
Sbjct: 2 FIDKVQAVENKFIDLEQRISDPSVIARQDEWQKLTKEHASLAPIIETFRKYKDVSATIAD 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +G+D E+ M E+ L+ E LEE+L VL+LP DP D +N+++E+R GAG
Sbjct: 62 DKEIIA-DGSDAELTAMAKEELSELTKEQEALEEELHVLMLPKDPNDDKNVIMEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSE-QNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GDEA I+AGDL RMY KY E Q WK ++ISS+ E GG+K V+ ++G+ VY KLKYES
Sbjct: 121 GDEAAIFAGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFSVEGDGVYGKLKYES 180
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE+ GR+HTSTATVA++PEA++VE+ ++ +D+ + R+ GAGGQ+VNK
Sbjct: 181 GVHRVQRVPVTESGGRIHTSTATVAVLPEAEDVEINLNMEDVRVDYFRASGAGGQHVNKT 240
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H P+GI + C +ER+QL+N+++A+++L+A+L E ++ R SQVGT
Sbjct: 241 SSAVRMTHIPSGIVVECQDERSQLENRAKAVRVLKARLLAQAEEEANAEVTEARRSQVGT 300
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
G R+E++RTYNY RVTDHR+ + ++L + ++G+ID +Q+ A + EL++E ES
Sbjct: 301 GDRSERVRTYNYPQGRVTDHRINLTLYKLENIMNGDIDEFIQALAEARRAELMKEAEES 359
>gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 357
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 245/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ LE + +K+L KLADPEV+S+ +++K+++ +L +V Y + + E +EE
Sbjct: 1 MLENLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L KE D+EM +++ +EI L + E LK+LL+P DP D +++++E+RAGAG
Sbjct: 61 NTELLKE-AEDKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EAG++AG+L RMY Y+++ ++K I S GG K ++G YSKLKYESG
Sbjct: 120 GEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PEADEV++ IDP DI RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA+LYE++ ++Q++I R SQVGTG
Sbjct: 240 SAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQKEISDNRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ K ++L FLDGNI+ + S +Q L+ + E
Sbjct: 300 DRSERIRTYNYPQGRITDHRINKTIYQLDDFLDGNIEEMIDSLITEDQTRKLKTMGED 357
>gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
3502]
gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
19397]
gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
gi|166223548|sp|A7FQG2.1|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223549|sp|A5HY35.1|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
3502]
gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
19397]
gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
Length = 358
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 253/356 (71%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + A+L+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +D+E+ EM EIK L+ +L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLKEE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L+RMY +Y+E+ +WK IS + + GGFK V + +KG YS+LKYESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID A+++ +Q E +++L
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQAEKMKDLG 355
>gi|399888435|ref|ZP_10774312.1| peptide chain release factor 1 [Clostridium arbusti SL206]
Length = 359
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 246/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+ +++LS+K++DP V++N E+QKL + AE++ +V+ YR++K+ E+ L++
Sbjct: 1 MLERLDFIENKYEELSIKISDPTVMANQKEWQKLCKEHAEMETIVTKYRQYKEAEQGLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E D E+ EM+ EIK +I+ +E+L++LLLP DP D +N+ +E+R GAG
Sbjct: 61 DQEMLGEK-IDRELKEMVEEEIKEHQQNIIKYQEELRILLLPKDPNDNKNVFVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ W ++S++E + GGFK +V IKG YS+LK+ESG
Sbjct: 120 GEEAALFAANLFRMYTRYAERRGWNIEIMSANETDIGGFKEIVFMIKGAGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTST+TVA++PE ++V+V I P D+ + R+ G GGQ VN +
Sbjct: 180 AHRVQRVPDTESSGRIHTSTSTVAVLPEVEDVDVEISPNDLRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PT + + C +E++QL+NK +A+++LRA+LYE E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTNMVVSCQDEKSQLKNKEKAMKVLRARLYEKAQEERSAGIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ M ++L SFLDG ID + + EQ E ++ +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGMTLYKLDSFLDGEIDEIIDALITEEQAEKMKAIG 355
>gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
108]
gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
108]
Length = 355
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K+ADPE++S E+QKL + + L +V +R++K ++E
Sbjct: 1 MIEKLQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELL-DTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG +D + + Q E L+E++
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEVS 355
>gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
14863]
gi|81610729|sp|Q67TD5.1|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
14863]
Length = 356
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 245/349 (70%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE + ++DL+ KL DP V++NP+EY+++A+ L +V +R ++ E++L++
Sbjct: 4 KLEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDDVLE 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ + + EE A + E++ L +L L ++L++LLLP DP D +N+++E+RAGAGGDE
Sbjct: 64 MLEGPLDPEERA-LFNQELRDLKEKLQTLSDELRILLLPRDPNDDKNVIMEIRAGAGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A +L RMY + +E++ WK ++S SE E GG K V+ +I YS+LKYE GVHR
Sbjct: 123 ASLFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGR+HTST TVA+MPE +EV++ I P+D+++ R+GGAGGQ+VNK E+A+
Sbjct: 183 VQRVPVTESQGRIHTSTVTVAVMPEMEEVDIEIKPEDLKIEVQRAGGAGGQHVNKTESAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI ++C +ER+Q+QN+ +AL++LRA++ + ++ + + R +QVGTG R+
Sbjct: 243 RMTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQLRRAQVGTGERS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
EKIRTYN+ +RVTDHR+ + + + +DG ID+ + + A EQ LL
Sbjct: 303 EKIRTYNFPQDRVTDHRIGLTVHNIAAVMDGEIDHIIDALAQHEQAALL 351
>gi|424828081|ref|ZP_18252822.1| peptide chain release factor 1 [Clostridium sporogenes PA 3679]
gi|365979564|gb|EHN15617.1| peptide chain release factor 1 [Clostridium sporogenes PA 3679]
Length = 358
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 253/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + AEL+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHAELEVIVNTYREYKKTQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +E +D+E+ EM EIK L+ +L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLREE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L+RMY +Y+E+ +WK +S + + GGFK V + +KG YS+LKYESG
Sbjct: 120 GDEAALFAANLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID +++ +Q E +++L +
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLGRA 357
>gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273]
gi|119361573|sp|Q3B6R6.1|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
luteolum DSM 273]
Length = 358
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/359 (46%), Positives = 241/359 (67%), Gaps = 3/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + DL LADP + + +++L + ++L E+V Y ++ +QLEE
Sbjct: 1 MFDKLQSIKERHLDLERMLADPAAAGDQTRFRRLNKEYSDLKEIVQAYDRYASARQQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR + K D EM M E+ L + LE++L++LLLP D D+RN+++E+RAG G
Sbjct: 61 SRHMQKAE-EDPEMKAMAREEMLELEERIPGLEQELRILLLPKDEADSRNVIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
G+EA ++A DL+RMYQ+Y+E+ W+C ++ +E+ GGF+ V + I G+ VY LKYES
Sbjct: 120 GEEAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGFREVTLTISGHDVYGTLKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP+TE QGR+HTS A+VA++PEA+EV+V I D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H+PTG+ C EER+QLQNK RA+++L AKLY+IK++EQQ++ R + V +
Sbjct: 240 ETAVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLYDIKLQEQQQERADMRRTMVAS 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
G R+ KIRTYNY +RVTDHR+ + L F+ G I + + +Q E L+E A +
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHGLPHFMQGEIGELIDALKMHDQTERLQEAARA 358
>gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
8052]
gi|189039964|sp|A6LQG2.1|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
8052]
Length = 360
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 245/350 (70%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE + +LSVK++DP ++ N +E++KL + A+L+ +V++YR++K + L+
Sbjct: 2 LLDKLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLKA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D+EM EM+ EI L+N +LE ++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLS-GESDKEMREMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GEEAALFAYNLFRMYTRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+VE+ + KD+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEVADKDVRIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE RE+ + I R SQVGTG
Sbjct: 241 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEQAERERAQGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYNY R+TDHR+ + ++L +FL G+ID + + +Q E
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLDTFLGGDIDEMINALITADQAE 350
>gi|366163504|ref|ZP_09463259.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
Length = 360
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 248/352 (70%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++A +++++ KL+DP V+ N EY+KL + AEL E+V Y ++K +++ +
Sbjct: 1 MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + D++ EM+ E+K L +++++LK+LLLP DP D +++++E+R GAG
Sbjct: 61 AKELLNDK-LDKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY +Y+E+ WK ++ S+ E GGFK VV I+GN +SKLK+ESG
Sbjct: 120 GEEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P+TEA GR+HTST TVA++PE +EV+V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 180 VHRVQRIPETEANGRIHTSTVTVAVLPEVEEVDVDINPNDLRIDTYRASGAGGQHINKTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +NK +A+++LR+KLYEI +Q +I R QVGTG
Sbjct: 240 SAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSEIAQARKGQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY R+TDHR+ + ++L S L+G++D + + +Q E L
Sbjct: 300 DRSERIRTYNYPQGRMTDHRIGLTLYKLESILEGDMDEVIDALITTDQAERL 351
>gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis
M23864:W1]
gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis
M23864:W1]
Length = 358
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 258/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++LE+
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E + EE+ EM+ E +L NEL ++EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLRETSDKEEV-EMLKEESTALKNELPDMEEELKILLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-VATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G++D + + EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLDEIIDALTLSEQTEKLKEL 353
>gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
Length = 358
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 246/359 (68%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L ++L +P V + + +++L + A+L +V TY ++K + +E+
Sbjct: 1 MFDKLDDILIHYEELMLELGNPSVTEDQNRFRRLMKEQADLAPLVETYTEYKKAKTAVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ E NDEEM E+ E+ ++ LE++LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLAILDEE-NDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY YSE WK LIS +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA++V+VVI+ KD + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEDVDVVIEDKDCRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + S A +Q L ++ E+V
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIAADQAAKLAKVNENV 358
>gi|420212554|ref|ZP_14717903.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM001]
gi|394279675|gb|EJE23978.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM001]
Length = 358
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L++
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E +L EL ++EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLNETSDKEEV-EMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE+ GG+K V + G YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESNHGGYKEVSFSVSGTGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++GN+D V++ EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQTEKLKEL 353
>gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118]
gi|119361553|sp|Q1WUD6.1|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius
UCC118]
Length = 360
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 243/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ +++L L+DP+V+S+ + KL++ MA+L E V Y K+K+ +Q+ +
Sbjct: 4 LFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +G D+EMA ++ E+ + NE ++LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLS-DGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I GN V+SKLKYESG
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ +++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + EQ + +E+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKL 357
>gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
Maree]
gi|238688740|sp|B1KSR1.1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
Maree]
Length = 358
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 252/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + A+L+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +D+E+ EM EIK L+ +L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLKEE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L+RMY +Y+E+ +WK IS + + GGFK V + +KG YS+LKYESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID A+++ +Q E ++ L
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQAEKMKNLG 355
>gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
Length = 358
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 247/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++LS K++DP ++++ E+QKL + AEL+ +V YR+++ E++LE
Sbjct: 1 MLERLEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLVIKYRQYRKAEEELES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D++M +MI +IK L + E ++L++LLLP DP D +N+ +E+R GAG
Sbjct: 61 NKEMLKDE-TDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ WK IS + + GGFK +V IKG YS+LKYESG
Sbjct: 120 GEEAALFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++VI+ DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDLVINANDIRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLFERAEAERSAGIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVTDHR+ + ++L S+LDG+ID + + +Q E ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALITTDQAEKMKAMG 355
>gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 361
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 252/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES ++++ +ADPEV+++ Y ++ + A++ EVV +RKFK ++++
Sbjct: 4 VMVQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAG 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +G+D E+ EM E L +E+ +LE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-DGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E W +++ S + E GG+K V + I GN+VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATVA+MPE ++V++ +DPK+I + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + ++K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAEN 360
>gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
35110]
gi|238692722|sp|B3QYI4.1|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
35110]
Length = 358
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 247/353 (69%), Gaps = 3/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +K++ +L+DP V+SN ++++L + + L E+V Y +++ + L++
Sbjct: 1 MFDQLQSIKDRYKEIEKQLSDPGVISNQDKFRQLNKEYSGLSEIVKAYDEYRKAKDALQQ 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L +D EM E+ ++ S ++ ELE++LK+LLLP + D+RN M+E+RAGAG
Sbjct: 61 SKELLYTE-SDPEMKELAQADYDEYSEKVPELEQQLKILLLPKEEADSRNAMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEK-GGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++A DL+RMYQ+++E+N WKC ++ +E+ GGFK + + G+ VY +K+ES
Sbjct: 120 GDEAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEATISLSGDDVYGTMKFES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP+TE QGRVHTS A+VA++PEA++ ++ I +D+++ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPETETQGRVHTSAASVAVLPEAEDFDIEIRKEDLQMDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H P+GI + C EER+QLQN+ RA+++LR+KLY+IK+ EQQ++ R S V T
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKLAEQQKERADLRRSMVST 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELL 404
G R+ KIRTYN+ +RVTDHR+ L LDG++ +++ +Q E L
Sbjct: 300 GDRSAKIRTYNFPQSRVTDHRIGFTTHALPQLLDGDLFEIIEALRVHDQTERL 352
>gi|420200809|ref|ZP_14706449.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM031]
gi|394267553|gb|EJE12140.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM031]
Length = 358
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L++
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E +L EL ++EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLSETSDKEEV-EMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE++ GG+K V + G YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIKIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G++D V++ EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQTEKLKEL 353
>gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|385815412|ref|YP_005851803.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418029163|ref|ZP_12667711.1| hypothetical protein LDBUL1632_00505 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|422845381|ref|ZP_16892091.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|122275439|sp|Q04BB3.1|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|354690881|gb|EHE90823.1| hypothetical protein LDBUL1632_00505 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 361
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 252/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES ++++ +ADPEV+++ Y ++ + A++ EVV +RKFK ++++
Sbjct: 4 VMAQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAG 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +G+D E+ EM E L +E+ +LE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-DGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E W +++ S + E GG+K V + I GN+VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATVA+MPE ++V++ +DPK+I + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + ++K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAEN 360
>gi|385840270|ref|YP_005863594.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius
CECT 5713]
gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius
CECT 5713]
Length = 360
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 244/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ +++L L+DP+V+S+ + KL++ MA+L E V Y K+K+ +Q+ +
Sbjct: 4 LFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +G D+EMA ++ E+ ++ +E ++LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLS-DGLDDEMASLVKEELSNVKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I GN V+SKLKYESG
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ +++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + EQ + +E+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKL 357
>gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
gi|416128250|ref|ZP_11597255.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
gi|418328423|ref|ZP_12939536.1| peptide chain release factor 1 [Staphylococcus epidermidis
14.1.R1.SE]
gi|418614626|ref|ZP_13177589.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU118]
gi|418633631|ref|ZP_13196039.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU129]
gi|420174286|ref|ZP_14680739.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM061]
gi|420178547|ref|ZP_14684877.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM057]
gi|420181341|ref|ZP_14687544.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM053]
gi|420191022|ref|ZP_14696959.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM037]
gi|420193551|ref|ZP_14699402.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM023]
gi|420204945|ref|ZP_14710483.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM015]
gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
gi|365232022|gb|EHM73037.1| peptide chain release factor 1 [Staphylococcus epidermidis
14.1.R1.SE]
gi|374819516|gb|EHR83638.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU118]
gi|374838969|gb|EHS02502.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU129]
gi|394245220|gb|EJD90537.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM061]
gi|394246270|gb|EJD91531.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM057]
gi|394246689|gb|EJD91943.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM053]
gi|394258120|gb|EJE03012.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM037]
gi|394259818|gb|EJE04649.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM023]
gi|394271666|gb|EJE16155.1| peptide chain release factor 1 [Staphylococcus epidermidis
NIHLM015]
Length = 358
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L++
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E +L EL ++EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLSETSDKEEV-EMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE++ GG+K V + G YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G++D V++ EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQTEKLKEL 353
>gi|404495237|ref|YP_006719343.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
gi|418065704|ref|ZP_12703075.1| peptide chain release factor 1 [Geobacter metallireducens RCH3]
gi|119361544|sp|Q39YQ1.1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78192856|gb|ABB30623.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
gi|373561784|gb|EHP88010.1| peptide chain release factor 1 [Geobacter metallireducens RCH3]
Length = 355
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 251/358 (70%), Gaps = 5/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E +++L LA P V++N E++KL++ +L +V YR++K ++E
Sbjct: 1 MFDKIEELEIRYQELESLLAVPTVIANQPEFRKLSREHNDLTGLVEAYRRYKKVLAEIEG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L D EM EM +E++ L + ELE ++K+LLLP DP D RN++LE+RAG G
Sbjct: 61 NRELLA----DPEMKEMAEAELEDLERQQEELEGEIKLLLLPKDPNDDRNVILEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++AGDL RMY +++E+N WK ++S+SE+E+GGFK VV I+G V++KLKYESG
Sbjct: 117 GDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALIEGQAVFAKLKYESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVA++PEA+++E+ I+P D+++ R+ GAGGQ+VNK E
Sbjct: 177 THRVQRVPETEAQGRIHTSACTVAVLPEAEDIEIDINPVDLKIDVYRASGAGGQHVNKTE 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++N+S+A+++L++++ + +EQ +I R QVG+G
Sbjct: 237 SAVRITHLPTGIVVECQDERSQIKNRSKAMKVLKSRILDGLQQEQNARIAADRKQQVGSG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + + L + ++G+I V S A Q E L+ AE+
Sbjct: 297 DRSERIRTYNFPQGRMTDHRIGLTLYRLDALMEGDIAEVVDSLRAHYQMEALKAQAEA 354
>gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
gi|417906667|ref|ZP_12550448.1| peptide chain release factor 1 [Staphylococcus capitis VCU116]
gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
gi|341597669|gb|EGS40215.1| peptide chain release factor 1 [Staphylococcus capitis VCU116]
Length = 358
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++LE+
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ KE + EE+ +M+ E SL EL E+EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLKETSDKEEV-DMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++GN+D + + EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQTEKLKEL 353
>gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21]
gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21]
Length = 359
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/341 (45%), Positives = 246/341 (72%), Gaps = 3/341 (0%)
Query: 72 LADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMI 131
L+DPEV++N +E++KL++ + L E+V+ YR++K +++++ L KE D+EM EM
Sbjct: 21 LSDPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEP--DQEMREMA 78
Query: 132 ASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKY 191
+E+ SL ELE ++K+LLLP DP D +N++LE+RAG GGDE+ ++AGDL RMY ++
Sbjct: 79 QAELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRF 138
Query: 192 SEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHT 251
+E N W+ +IS+SE+EKGGFK V+ ++G V++KLKYESG HRVQRVP+TEAQGR+HT
Sbjct: 139 AETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHT 198
Query: 252 STATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTE 311
S TVA+MPEA++V++ I+P D+++ RS GAGGQ+VN ++A+ + H PTG + C E
Sbjct: 199 SACTVAVMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258
Query: 312 ERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTD 371
ER+Q++N+++A+++L++++ + + EQ K+ R SQVG+G R+E+IRTYN+ R+TD
Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNILMEQNAKLAADRKSQVGSGDRSERIRTYNFPQGRMTD 318
Query: 372 HRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
HR+ + + L + + G+I S A Q E L+ +E +
Sbjct: 319 HRIGLTLYRLDAIMAGDIAEIADSLRAHYQMEALQAQSEGM 359
>gi|334146162|ref|YP_004509089.1| peptide chain release factor 1 [Porphyromonas gingivalis TDC60]
gi|333803316|dbj|BAK24523.1| peptide chain release factor 1 [Porphyromonas gingivalis TDC60]
Length = 361
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 245/362 (67%), Gaps = 4/362 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M+E L+ +L+ ++++S + DP V+++ + KL++ +L+++ + R +++
Sbjct: 1 MSENNLLDRLDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLL 60
Query: 109 KQLEESR-ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
+EE++ +AKE+ DEE+ EM + ++ L LEE++K+LL+P++P D +N ++E
Sbjct: 61 ANIEEAKHTMAKES--DEELREMAREMLAEANDRLPILEEEIKMLLIPANPEDDKNAIVE 118
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+R G GGDEA ++AGDL RMY KY E W+ + SE GG+K +V +KG VY
Sbjct: 119 IRGGTGGDEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGI 178
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LKYESGVHRVQRVP TE QGR+HTS ATVA++PEA+EV+V I+P DIE+ T+RSGGAGGQ
Sbjct: 179 LKYESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQ 238
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVET + L HKPTG+ + C + R+Q+ N+ A+Q+LR+KLY+I++ + E I +R
Sbjct: 239 NVNKVETKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARRK 298
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
+ V TG R+ KIRTYNY RVTDHR+ M + L++ +DG + + + E E ++E
Sbjct: 299 TMVSTGDRSAKIRTYNYPQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAENVERMKE 358
Query: 407 LA 408
A
Sbjct: 359 AA 360
>gi|333379444|ref|ZP_08471167.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836]
gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836]
Length = 361
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 240/359 (66%), Gaps = 2/359 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA L+ +L++ ++++ + DP V+++ Y KL + +L+++ R++K
Sbjct: 1 MAHSSLLERLDALNIRFEEIGKLITDPAVIADMKRYVKLNKEYRDLEKIDIARREYKQLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+EE++ + EN +D E+ E+ E+ + + + +LEE++K LL+P+DP D++N ++E+
Sbjct: 61 ATIEEAKGIL-ENEDDSELREIAKEEMDAANERMPKLEEEIKFLLVPADPQDSKNAIMEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
R G GGDEA I+AGDL RMYQKY E WK + S +E GGFK ++ + G VY L
Sbjct: 120 RGGTGGDEAAIFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGIL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TE QGRVHTS ATVA++PEA+EV+V I+P DIE+ TARS GAGGQN
Sbjct: 180 KYESGVHRVQRVPATETQGRVHTSAATVAVLPEAEEVDVDINPADIEMQTARSSGAGGQN 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVET + L HKP+G+ + C + R+QL N+ A+Q+LR KLY+I++ + + I ++R +
Sbjct: 240 VNKVETKVQLTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKYMDAIASKRKT 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
V TG R+ KIRTYNY R+TDHR+ + + L++ +DG I + E E L+E
Sbjct: 300 MVSTGDRSAKIRTYNYPQGRMTDHRINLTMYNLSAVMDGEIQPIIDQLIIAENTERLKE 358
>gi|418035911|ref|ZP_12674349.1| hypothetical protein LDBUL1519_01049 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689070|gb|EHE89082.1| hypothetical protein LDBUL1519_01049 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 357
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
+ +LES ++++ +ADPEV+++ Y ++ + A++ EVV +RKFK ++++ +
Sbjct: 1 MAQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGN 60
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ + +G+D E+ EM E L +E+ +LE+++K+L+LP DP D ++I++E+R AGG
Sbjct: 61 KEIIA-DGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGG 119
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA ++AGDL+RMY+KY+E W +++ S + E GG+K V + I GN+VYSKLKYE+G
Sbjct: 120 DEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGA 179
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQR+P TE+ GRVHTSTATVA+MPE ++V++ +DPK+I + RS GAGGQ++NK +
Sbjct: 180 HRVQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSS 239
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + ++K +R + VGTG
Sbjct: 240 AVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTGD 299
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE+
Sbjct: 300 RSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAEN 356
>gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
Length = 357
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/353 (46%), Positives = 240/353 (67%), Gaps = 3/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+S + DL LADP ++ + ++KL + ++L E+V Y + + +L++
Sbjct: 1 MLDKLQSIKEKHLDLEQLLADPNAATDQARFRKLNKEYSDLREIVQAYDAYGQAKTELDQ 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L ++ +D EM E++ +EI L +L ELE+ LKVLLLP D D+RN+++E+RAG G
Sbjct: 61 SKKLL-DSESDPEMRELVQAEISELQKKLPELEQHLKVLLLPKDEADSRNVIVEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
G+EA ++A D++RMYQ+Y+E+ WKC ++ +E+ GGF+ + +E+ G+ VY +KYES
Sbjct: 120 GEEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGFREITLEVSGHDVYGTMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+HTS +VA++PEA+EV+V I +D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAVSVAVLPEAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H PTGI C EER+QLQNK RA+++LR KLY+I + EQ ++ R S V T
Sbjct: 240 ETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLYDILLAEQVQQRADLRRSMVTT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELL 404
G R+ KIRTYNY +RVTDHR+ + L L G I + + + +Q E L
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQILQGEIQDIIDALKMHDQAERL 352
>gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
Length = 362
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 249/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE ++++ +ADPEV+++ Y ++++ A++ EVV YRK+++ +K + +
Sbjct: 4 VMAQLEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E+ +D ++ EM E L E+ +LEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEII-ESESDADLVEMAKEENSDLEKEVADLEEEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E WK ++I E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + Q +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQASYDEKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIISALIVHYQTKQLEELAED 360
>gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
Length = 357
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 245/357 (68%), Gaps = 1/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ + +K+L ++ PE++ N +QK + M++++ +V TY FK +++L +
Sbjct: 1 MLDKLDFIVEKYKELEAAVSKPEIIGNQPLWQKYIKEMSDMEPIVKTYSSFKKHKQELSD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L G DEEM ++ EI L +E+ + EE+LK+LL+P DP D +N++LE+RAG G
Sbjct: 61 AKELLAGAGGDEEMKDLAKLEISGLEDEINKEEEQLKILLIPKDPRDEKNVILEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++ DL+RMY Y++ +WK +I +E G K VM IKG +S+LKYESG
Sbjct: 121 GEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLIKGKGAFSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GRVHTS ATVA++PE D+VEV ++P D+ + RS G GGQ+VN +
Sbjct: 181 VHRVQRVPTTESSGRVHTSAATVAVLPEMDDVEVDLNPNDVRVDVYRSSGNGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H+PTGI + C +E++Q++NK +A ++L+++LY +K+ EQ +++ +R SQVG+G
Sbjct: 241 SAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKMEEQNKQLSDERKSQVGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RV+DHR+ + ++L +F++G+ID ++ +Q + + E
Sbjct: 301 DRSERIRTYNFPQGRVSDHRIGLTIYKLDNFMNGDIDEVIEGLITADQAAKMSKFGE 357
>gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
15579]
gi|187774198|gb|EDU38000.1| peptide chain release factor 1 [Clostridium sporogenes ATCC 15579]
Length = 358
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 252/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + A+L+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +E +D+E+ EM EIK L+ +L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLREE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L+RMY +Y+E+ +WK +S + + GGFK V + +KG YS+LKYESG
Sbjct: 120 GDEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID +++ +Q E +++L
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355
>gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str.
Langeland]
gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf]
gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
gi|384460586|ref|YP_005673181.1| peptide chain release factor 1 [Clostridium botulinum F str.
230613]
gi|387816368|ref|YP_005676712.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
gi|429247092|ref|ZP_19210368.1| peptide chain release factor 1 [Clostridium botulinum CFSAN001628]
gi|166223550|sp|A7G9P2.1|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229576659|sp|B1IE21.1|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str.
Langeland]
gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf]
gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str.
230613]
gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
gi|428755945|gb|EKX78540.1| peptide chain release factor 1 [Clostridium botulinum CFSAN001628]
Length = 358
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 252/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + A+L+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +D+E+ EM EIK L+ +L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLKEE-SDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L+RMY +Y+E+ +WK +S + + GGFK V + IKG YS+LKYESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID +++ +Q E +++L
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355
>gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
Length = 361
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 237/359 (66%), Gaps = 2/359 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + ++ KLE + ++S + DP V+++ + + KL + EL ++++ +++
Sbjct: 1 MTDNSILNKLEDLVARFDEVSTLITDPAVIADQTRFVKLTKEYKELSDLMNARKEYIAAL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ + E++ + +D EM EM E++ + ELEE +K+LL+P DP D RN ++E+
Sbjct: 61 QGVTEAKEIIAHE-SDPEMKEMAREELEDCETRIPELEETIKLLLIPKDPQDERNAIMEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA ++AGDL RMY KY E W + + +E GGFK +V + G+ VY L
Sbjct: 120 RAGTGGDEAALFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSVSGDNVYGIL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V ++P DIEL TARSGGAGGQ+
Sbjct: 180 KYESGVHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVELNPADIELQTARSGGAGGQH 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVET + L HKPTG+ + C E R+Q N+ +A+Q+LR+KLYEI+ + ++ QR S
Sbjct: 240 VNKVETKVMLTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKANKERSEQRKS 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
V TG R+ KIRTYNY R+TDHR+ + L +F+DG+I + + E E ++E
Sbjct: 300 LVSTGDRSAKIRTYNYPQGRITDHRINYTIYNLQAFMDGDIQDCIDHLIVAENAERMKE 358
>gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
DSM 5476]
gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
DSM 5476]
Length = 361
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 239/348 (68%), Gaps = 1/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL K + +++ KL DP VV++ Y+ L + + L ++ YR++K + LEE
Sbjct: 4 IFDKLSLTEKRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYKAAKDNLEE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E G D+E EM+ + + +L E+LK+LLLP+DP D +++++E+R GAG
Sbjct: 64 AKEMLSEGGLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRGGAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY Y+E WK ++S++E E GGFK V E+ G YS+LK+ESG
Sbjct: 124 GEEAALFAYNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKFESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TEA GR+HTST TVA++PEA+EVE I+P DI++ T R+ GAGGQ+VNK E
Sbjct: 184 VHRVQRVPETEASGRIHTSTVTVAVLPEAEEVEFDINPTDIQVDTFRASGAGGQHVNKTE 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI L + PTG+ + C +ER+Q +NK +A+++LR +LYE ++E +KI ++R +QVGTG
Sbjct: 244 SAIRLTYLPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAMKEATDKIASERKAQVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+E+IRTYNY R+TDHR+ + + L ++G+ID + + +Q
Sbjct: 304 DRSERIRTYNYPQGRITDHRIGLTLYHLEQNMNGDIDEIIDALITADQ 351
>gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
Length = 363
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 241/352 (68%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + ++ +LADP+V ++P +LA+ AEL+E+V+ YR+ KD ++Q+ +
Sbjct: 8 VLDKLAELEQRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKDIDRQVAQ 67
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + D ++ E+ A EI L + ++L+ L+P DP D +++++E+RAG G
Sbjct: 68 AEELLE--AEDPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ WK ++SSS E GGFK ++ E++G YS K+ESG
Sbjct: 126 GEEAALFAADLFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEADEVEV ID D+ + RS G GGQ+VN +
Sbjct: 186 VHRVQRVPITESSGRIHTSTATVAVLPEADEVEVHIDEDDLRIEVFRSSGHGGQSVNTTD 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+QL+N+ +A+ +LRA+LYE++ R+ +E+ R QVGTG
Sbjct: 246 SAVRITHLPTGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEEERTGLRRQQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
RAEKIRTYN+ +RVTDHRLK+ L + LDG ID +Q A+E E L
Sbjct: 306 ERAEKIRTYNFPQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALEMAERL 357
>gi|363895275|ref|ZP_09322273.1| peptide chain release factor 1 [Eubacteriaceae bacterium ACC19a]
gi|361957713|gb|EHL11018.1| peptide chain release factor 1 [Eubacteriaceae bacterium ACC19a]
Length = 357
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 244/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L S + DL +K++DPE+++N ++QKL + AEL VVS Y ++ + ++
Sbjct: 1 MFENLSSLKDKYADLEIKISDPEIINNQEQWQKLMKEHAELSPVVSKYNEYVKATEDIKG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N DE++ ++ E+ L L ++ E+LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKDIIA-NETDEDLRDLAKEELSDLEENLEKVIEELKILLLPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+ WK L+SS+E GG+K V+ I G YS+LK+ESG
Sbjct: 120 GEEAALFAGVLFRMYSMYASNRRWKVELMSSNETGIGGYKEVIFMISGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGR+HTST TVA++PEA++VEV +D D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESQGRIHTSTVTVAVLPEAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I +E++QL+NK +A ++L+AKLY+I++ + Q+++ +QR SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISMQDEKSQLKNKEKAFKILKAKLYDIELEKAQKEMASQRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
RAE+IRTYNY RV+DHR+ +N ++L +FL+G++D + + Q E L L
Sbjct: 300 DRAERIRTYNYPQGRVSDHRIGLNLYKLEAFLNGDLDEVIDALITTAQAENLNSL 354
>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
Length = 358
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 242/352 (68%), Gaps = 3/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + +L K+ADP VVS+ E Q L + +EL+EVV YR+++ ++ E++
Sbjct: 6 KLRELEAIYAELEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYRRYRQVRDEIAEAKE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L G D E+AE+ E++ L ++EE+L+V LLP DP D +++++E+RAG GGDE
Sbjct: 66 LV--GGGDHELAELAKMELEEKEPLLGKIEEQLRVALLPKDPNDEKDVIMEIRAGTGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +Y+E+ WK ++ +E E GG+K +V++I G VYS+LKYESGVHR
Sbjct: 124 ASLFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGVYSQLKYESGVHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS ATV +MP AD++++ I P+D+++ T RS GAGGQ+VN ++A+
Sbjct: 184 VQRVPATEAGGRIHTSAATVVVMPVADDIDIEIRPEDLKIDTYRSSGAGGQHVNMTDSAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +ER+Q++N+++ALQ+L+ +LY+ +V +Q+ +R +G+G R+
Sbjct: 244 RITHLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAESAERKGMIGSGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYNY NRVTDHR+ + ++L +DG++ +++ EQ LE L
Sbjct: 304 ERIRTYNYPQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALVMAEQAAKLEAL 355
>gi|357632412|ref|ZP_09130290.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
gi|357580966|gb|EHJ46299.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
Length = 357
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 253/357 (70%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + + +L +L+DP VV++ Y+KL ++ A++ ++++ +R+ K + LEE
Sbjct: 1 MFAKLESLERKYVELEKQLSDPSVVNDQERYRKLTKAHADMADMMAAFREHKQLSRDLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ +A++ D EM E+ +EIK++ L E+E +LK+LLLP DP+D +NI+LE+RAG G
Sbjct: 61 NQEMAQDP--DPEMRELALAEIKAIKEALPEIEARLKLLLLPKDPMDDKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E WK L+S SE GG+K V+ I G++VYS+LKYESG
Sbjct: 119 GEEAALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASIAGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV+V IDP D+ + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++Q +NK++AL++LR++L +I+ +Q+ + R SQVGTG
Sbjct: 239 SAVRVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQRLEQEATRRSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ +RVTDHR+ + + L + L+G++D + A Q E L+ A+
Sbjct: 299 DRSERIRTYNFPQSRVTDHRINLTLYRLEAVLEGDLDELCEGLIAHYQSEALKAQAD 355
>gi|375148937|ref|YP_005011378.1| peptide chain release factor 1 (bRF-1) [Niastella koreensis
GR20-10]
gi|361062983|gb|AEW01975.1| bacterial peptide chain release factor 1 (bRF-1) [Niastella
koreensis GR20-10]
Length = 354
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 236/354 (66%), Gaps = 7/354 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ ++DL V L +PE+VSN +++ ++Q L+++V Y ++K L+
Sbjct: 1 MLDKLEAIKAKFEDLGVALTNPEIVSNNRKFRAMSQEYRSLEKIVIAYEEYKKVLGDLD- 59
Query: 114 SRALAKE--NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ KE NG+D E+ E+ E+ +L +LE ++ LL+P DP D +N +LE+RAG
Sbjct: 60 ---VYKEALNGDDAELRELAKEELPALDESKEKLEAHIRRLLIPKDPQDEKNCILEIRAG 116
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA ++AGDL+RMY +Y E+ WK ++S SE GG+K V +E+ G VY LK+E
Sbjct: 117 TGGDEASLFAGDLLRMYLRYCEKKGWKTAVLSESEGTVGGYKEVQLEVTGEDVYGTLKFE 176
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SGVHRVQRVP TE GRVHTS ATVA MPEA+EV+V + D+++ TARSGGAGGQNVNK
Sbjct: 177 SGVHRVQRVPDTETSGRVHTSAATVAAMPEAEEVDVEVKDSDVKMETARSGGAGGQNVNK 236
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
VET + L H PTG+ + C ERTQL N+ +A+Q+LR KLYE +VR+Q+++I R S V
Sbjct: 237 VETKVILTHLPTGMVVMCQTERTQLGNREKAMQMLRTKLYEEEVRKQEDEISRHRKSLVS 296
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
+G R+ KIRTYNY R+TDHR+ + + L ++GN+ + + E E L
Sbjct: 297 SGDRSAKIRTYNYPQGRITDHRIGLTVYNLDDVMNGNVQEFIDALQFAENAEKL 350
>gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis
Ellin345]
gi|119361503|sp|Q1II28.1|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
Koribacter versatilis Ellin345]
Length = 359
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 243/359 (67%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + +L+ LA PE+V++ ++YQK A++ AEL ++V YR++KD + +++
Sbjct: 1 MFERLDLMEAKYDELTQALASPEIVNDSAKYQKTAKAHAELTQLVQKYREYKDLTRGIKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR + E D EM E+ L L +EE LKVLLLP DP D +NI++E+RAG G
Sbjct: 61 SRQMVAEE-TDAEMKAYAQQELTELEQRLHAVEEDLKVLLLPRDPNDDKNIIVEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E WK ++SSSE+ GG K V+ I+G YSKLKYESG
Sbjct: 120 GDEASLFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAIIEGRGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVPQTE QGRVHTS TVA++PEA+EV++ I+ KDI + T S G GGQ+VN
Sbjct: 180 VHRVQRVPQTETQGRVHTSAVTVAVLPEAEEVDIKIEAKDIRIDTFCSSGPGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PT + C +E++Q++N+ + +++LRA+LYE++ ++Q + + +R QVG+G
Sbjct: 240 SAVRITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQADALAKERKQQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ NRVTDHR+ +L+ F+DG I+ +++ Q E L+E +V
Sbjct: 300 DRSEKIRTYNFPQNRVTDHRIGYTVHQLSEFMDGKINALIEALTTHYQAEKLKEQTTAV 358
>gi|375012079|ref|YP_004989067.1| peptide chain release factor 1 [Owenweeksia hongkongensis DSM
17368]
gi|359348003|gb|AEV32422.1| peptide chain release factor 1 [Owenweeksia hongkongensis DSM
17368]
Length = 356
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/357 (46%), Positives = 238/357 (66%), Gaps = 7/357 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL++ + + +++ + P+V+++ Y L + +L +V K+ QL+++ A
Sbjct: 4 KLDAIQQRYHEVNDLIIQPDVIADQKRYVTLTREYKDLKPLVEAREKYM----QLKDNIA 59
Query: 117 LAKE--NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
AKE + +D EM EM E++S EL ELE +++++L+P DP DA+N LE+R GAGG
Sbjct: 60 EAKEILHSDDTEMKEMAKMELESAVPELEELEAEIRIMLIPKDPEDAKNATLEIRGGAGG 119
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I+AGDL MY +Y + WK ++ SE GG+K VV+E+ G VY LK+ESGV
Sbjct: 120 DEAAIFAGDLYDMYTRYIQSKGWKAEVLDVSEGTMGGYKEVVIEVTGEDVYGTLKFESGV 179
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVPQTE QGRVHTS ATVA++PEA++V+V ++P D+E+ T+RSGGAGGQNVNKVET
Sbjct: 180 HRVQRVPQTETQGRVHTSAATVAVLPEAEDVDVELNPADVEMQTSRSGGAGGQNVNKVET 239
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
+ L HKP+GI + C ER+QL N+ RA+Q+LR KLYE ++ + I ++R S V TG
Sbjct: 240 KVQLTHKPSGIVVVCQIERSQLANRERAMQMLRTKLYEQELAKHNAAISSKRKSMVSTGD 299
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+ KIRTYNY RVTDHR+ + L ++GNI N + E E ++E +ES
Sbjct: 300 RSAKIRTYNYPQGRVTDHRINYTVYNLDDVMNGNIQNFIDELQLAENAERMKEGSES 356
>gi|403667964|ref|ZP_10933261.1| peptide chain release factor 1 [Kurthia sp. JC8E]
Length = 359
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 246/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DP++VS+ + + ++ +++ E V+ YR++K ++Q+EE
Sbjct: 1 MFDRLQAVEDRYERLNELLSDPDIVSDSKKLAQFSKEQSDIQETVTVYREYKSIKEQIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E D EM EM E+K L ++ LEEK+KVLL+P DP D +NI++E+R AG
Sbjct: 61 TKELI-EIEEDAEMKEMEQEELKELDAQIPALEEKMKVLLIPKDPNDGKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY KY+E WK ++S++ E GG+K +V+ I G+ VYSKLKYE+G
Sbjct: 120 GDEAALFANSLFRMYSKYAETQGWKTEIVSANPTELGGYKEIVIMISGSDVYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+QGRVHTSTATV +MPEA EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPETESQGRVHTSTATVVVMPEAAEVELDLQDKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + +ER+QL+N+ +A+++LRA++Y+ +E+Q K +R S VGTG
Sbjct: 240 SAVRMTHIPTGVVVAMQDERSQLKNREKAMKILRARVYDKLQQEEQSKYDAERKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + + L +DG +++ + + EQ + L+ L E
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIIDGKLEDVIDALIMEEQAQKLDALNE 356
>gi|363890968|ref|ZP_09318262.1| peptide chain release factor 1 [Eubacteriaceae bacterium CM5]
gi|361962735|gb|EHL15844.1| peptide chain release factor 1 [Eubacteriaceae bacterium CM5]
Length = 357
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 244/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L S + DL +K++DPE+++N ++QKL + AEL VVS Y ++ + ++
Sbjct: 1 MFENLSSLKDKYADLEIKISDPEIINNQEQWQKLMKEHAELSPVVSKYNEYVKSTEDIKG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N DE++ ++ E+ L L ++ E+LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKDIIA-NETDEDLRDLAKEELSDLEENLEKVIEELKILLLPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+ WK L+SS+E GG+K V+ I G YS+LK+ESG
Sbjct: 120 GEEAALFAGVLFRMYSMYASNRRWKVELMSSNETGIGGYKEVIFMISGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGR+HTST TVA++PEA++VEV +D D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESQGRIHTSTVTVAVLPEAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I +E++QL+NK +A ++L+AKLY+I++ + Q+++ +QR SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISMQDEKSQLKNKEKAFKILKAKLYDIELEKAQKEMASQRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
RAE+IRTYNY RV+DHR+ +N ++L +FL+G++D + + Q E L L
Sbjct: 300 DRAERIRTYNYPQGRVSDHRIGLNLYKLEAFLNGDLDEVIDALITTAQAENLNSL 354
>gi|363893143|ref|ZP_09320282.1| peptide chain release factor 1 [Eubacteriaceae bacterium CM2]
gi|402838158|ref|ZP_10886670.1| peptide chain release factor 1 [Eubacteriaceae bacterium OBRC8]
gi|361961667|gb|EHL14850.1| peptide chain release factor 1 [Eubacteriaceae bacterium CM2]
gi|402273662|gb|EJU22857.1| peptide chain release factor 1 [Eubacteriaceae bacterium OBRC8]
Length = 357
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 244/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L S + DL +K+ADPE+++N ++QKL + AEL VVS Y ++ + ++
Sbjct: 1 MFENLSSLKDKYADLEIKIADPEIINNQEQWQKLMKEHAELSPVVSKYNEYVKATEDIKG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N DE++ ++ E+ L L ++ E+LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKDIIA-NETDEDLRDLAKEELSDLEENLEKVIEELKILLLPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+ WK L+SS+E GG+K V+ I G YS+LK+ESG
Sbjct: 120 GEEAALFAGVLFRMYSMYASNRRWKVELMSSNETGIGGYKEVIFMISGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGR+HTST TVA++PEA++VEV +D D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESQGRIHTSTVTVAVLPEAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I +E++QL+NK +A ++L+AKLY++++ + Q+++ +QR SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISMQDEKSQLKNKEKAFKILKAKLYDMELEKAQKEMASQRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
RAE+IRTYNY RV+DHR+ +N ++L +FL+G++D + + Q E L L
Sbjct: 300 DRAERIRTYNYPQGRVSDHRIGLNLYKLEAFLNGDLDEVIDALITTAQAENLNSL 354
>gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
Length = 359
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A E V+ YR++K + +E+
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVAVYREYKKVLQNIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ G D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDAGGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E WK ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q + +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKVIRARVADHFAQIAQNEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEIIDALVLFDQTKKLEEL 357
>gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555]
gi|189039965|sp|A5N3J7.1|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555]
Length = 357
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 247/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS+K++DP ++++ ++QKL + AEL+E+V YR++K+ + LE+
Sbjct: 1 MLERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E D++M EM EIK L + + + E++LK+LLLP DP D +N+ +E+R GAG
Sbjct: 61 NKEMLREE-TDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E WK IS S + GGFK +V +KG YS+LKYESG
Sbjct: 120 GEEAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PE D+V++V++ DI + R+ G GGQ VN +
Sbjct: 180 THRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIVVNQNDIRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE E+ I R +QVGTG
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERNASIAEDRKNQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVTDHR+ M ++L SFL+G+ID + + +Q + ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQAQKMKSIG 355
>gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705189|ref|YP_005203648.1| peptide chain release factor 1 [Streptococcus infantarius subsp.
infantarius CJ18]
gi|171281969|gb|EDT47400.1| peptide chain release factor 1 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374681888|gb|AEZ62177.1| peptide chain release factor 1 [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 359
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A E V+ YR++K + +E+
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ G D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDAGGDPELEEMAKEELKDSKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E WK ++ +S GG K V++ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILFDQTKKLEEL 357
>gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
gi|419970357|ref|ZP_14485856.1| peptide chain release factor 1 [Porphyromonas gingivalis W50]
gi|46576709|sp|Q7MXT5.1|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
gi|392611028|gb|EIW93782.1| peptide chain release factor 1 [Porphyromonas gingivalis W50]
Length = 361
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 249/363 (68%), Gaps = 6/363 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M+E L+ +L+ ++++S + DP V+++ + KL++ +L+++ + R +++
Sbjct: 1 MSENNLLDRLDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLL 60
Query: 109 KQLEESR-ALAKENGNDEEMAEMIASEIKSLSNE-LIELEEKLKVLLLPSDPLDARNIML 166
+EE++ +AKE+ DEE+ EM A E+ + +NE L LEE++K+LL+P++P D +N ++
Sbjct: 61 ANIEEAKHTMAKES--DEELREM-AREMLAEANERLPILEEEIKMLLIPANPEDDKNAIV 117
Query: 167 EVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYS 226
E+R G GGDEA ++AGDL RMY KY E W+ + SE GG+K +V +KG VY
Sbjct: 118 EIRGGTGGDEAALFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYG 177
Query: 227 KLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGG 286
LKYESGVHRVQRVP TE QGR+HTS ATVA++PEA+EV+V I+P DIE+ T+RSGGAGG
Sbjct: 178 ILKYESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDVEINPADIEMQTSRSGGAGG 237
Query: 287 QNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQR 346
QNVNKVET + L HKPTG+ + C + R+Q+ N+ A+Q+LR+KLY+I++ + E I +R
Sbjct: 238 QNVNKVETKVQLTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARR 297
Query: 347 LSQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
+ V TG R+ KIRTYNY RVTDHR+ M + L++ +DG + + + E E ++
Sbjct: 298 KTMVSTGDRSAKIRTYNYPQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAENVERMK 357
Query: 406 ELA 408
E A
Sbjct: 358 EAA 360
>gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 360
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 242/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ +++L L+DP+V+S+ + KL++ M +L E V Y K+K+ +Q+ +
Sbjct: 4 LFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMVDLRETVEKYNKYKEVTQQISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +G D+EMA ++ E+ + NE ++LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLS-DGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I GN V+SKLKYESG
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ +++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + EQ + +E+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKL 357
>gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87]
gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87]
Length = 358
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++LE+
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ KE + EE+ +M+ E SL EL E+EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLKETSDKEEV-DMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E++RTYNY +RVTDHR+ + + L ++GN+D + + EQ E L+EL
Sbjct: 299 DRSERVRTYNYPQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQTEKLKEL 353
>gi|397690016|ref|YP_006527270.1| peptide chain release factor 1 [Melioribacter roseus P3M]
gi|395811508|gb|AFN74257.1| peptide chain release factor 1 [Melioribacter roseus P3M]
Length = 360
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 248/351 (70%), Gaps = 2/351 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++++ KL DP+V+S+ + L++ EL+E+V+ + +++ K++ ++
Sbjct: 6 KLKSIREKFEEINTKLTDPDVLSDQKKVISLSKERRELEEIVAAFSEYEKVLKEINGNKE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ E +D+E+ E E+K LS +L ELEEK+KVLL+P DP D +++++E+RAG GG+E
Sbjct: 66 II-ETSSDKELVEFAEVELKDLSKKLEELEEKIKVLLIPKDPNDDKDVIVEIRAGTGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
AG++A DL RMY +Y+E+ W+ LI S+ GG K VV + G V+ +K+ESGVHR
Sbjct: 125 AGLFAADLYRMYSRYAEKRGWQKELIDISDTGLGGIKEVVFSLSGTNVFGDMKFESGVHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TEA GR+HTS A+V ++PE ++V+V IDP D+ + RSGGAGGQNVNKVETAI
Sbjct: 185 VQRVPETEASGRIHTSAASVVVLPEVEDVDVEIDPNDLRIDAYRSGGAGGQNVNKVETAI 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +ER+QL+N+ +A+++L+A+LY++K++EQ +I QR V G R+
Sbjct: 245 RITHLPTGLVVQCQDERSQLKNRQKAMKVLKARLYDMKMQEQMSEISAQRKLMVRKGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
+KIRTYN+ NRVTDHR+ + + L S ++G++D ++ ++ E L E
Sbjct: 305 DKIRTYNFPQNRVTDHRIGLTLYNLDSIMEGDLDELIEKLKIADRAEKLNE 355
>gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
gi|385817344|ref|YP_005853734.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL1118]
gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL1118]
Length = 362
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 252/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K +K+LE+
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELED 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N +DE++ EM E + E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKKIIA-NESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ WK +LI S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
Kyoto]
gi|254790873|sp|C1FQ97.1|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
Kyoto]
Length = 358
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 251/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + A+L+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +D+E+ EM EIK L+ L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLKEE-SDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L+RMY +Y+E+ +WK +S + + GGFK V + IKG YS+LKYESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID +++ +Q E +++L
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355
>gi|374583762|ref|ZP_09656856.1| peptide chain release factor 1 [Desulfosporosinus youngiae DSM
17734]
gi|374419844|gb|EHQ92279.1| peptide chain release factor 1 [Desulfosporosinus youngiae DSM
17734]
Length = 356
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 250/352 (71%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + +L+ L+DPE+++ SE+QK A++ A + +V+T+R+++ ++LEE
Sbjct: 1 MLEKLYEVERKYDELTELLSDPEIIAKQSEWQKYAKAQAGMTNLVTTFREYQGVLRELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +L KE D ++ EM E ++L + ELE +++VLLLP DPLD +N+++E+RAGAG
Sbjct: 61 TESLLKEK-LDSDLQEMAEQEREALLKQSQELEAQIQVLLLPKDPLDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AGDL +MY +Y+E WK L+S+S ++ GG+K ++ ++G+ YSKLK+ESG
Sbjct: 120 GDEAGLFAGDLYKMYTRYAEGQGWKVELLSASYSDIGGYKEIIFLLEGHGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA+EVEV I+P D+ + S G GGQ VN +
Sbjct: 180 VHRVQRIPATESGGRIHTSTATVAVLPEAEEVEVTINPNDLRIDIYCSSGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C +E++QL+NK +AL++LRA++ E E + ++R SQVGTG
Sbjct: 240 SAVRITHLPTGIIASCQDEKSQLKNKEKALRVLRARILEKAQEEASGEQASERRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ RVTDHR+ + L + L G+++ +Q+ +A +Q E L
Sbjct: 300 DRSERIRTYNFPQGRVTDHRINLTLHRLETILAGDLEEIIQALSASDQAERL 351
>gi|417788110|ref|ZP_12435793.1| peptide chain release factor 1 [Lactobacillus salivarius NIAS840]
gi|417810447|ref|ZP_12457126.1| peptide chain release factor 1 [Lactobacillus salivarius GJ-24]
gi|418961198|ref|ZP_13513085.1| peptide chain release factor 1 [Lactobacillus salivarius SMXD51]
gi|334308287|gb|EGL99273.1| peptide chain release factor 1 [Lactobacillus salivarius NIAS840]
gi|335349243|gb|EGM50743.1| peptide chain release factor 1 [Lactobacillus salivarius GJ-24]
gi|380344865|gb|EIA33211.1| peptide chain release factor 1 [Lactobacillus salivarius SMXD51]
Length = 360
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 243/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ +++L L+DP+V+S+ + KL++ MA+L E V Y K+K+ +Q+ +
Sbjct: 4 LFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +G D+EMA ++ E+ + +E ++LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLS-DGLDDEMASLVKEELSNAKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I GN V+SKLKYESG
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ +++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + EQ + +E+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQTKAMEKL 357
>gi|418632436|ref|ZP_13194867.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU128]
gi|374832343|gb|EHR96058.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU128]
Length = 358
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 257/355 (72%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L++
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E +L EL ++EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLSETSDKEEV-EMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E N +K ++ +SE++ GG+K V + G YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS G+GGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGSGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++K++E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G++D V++ EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQTEKLKEL 353
>gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
gi|166977357|sp|A6TK43.1|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
Length = 357
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 250/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + ++DL K++DPE++++ ++QKL + +E++ +V YR++K ++ L E
Sbjct: 1 MLDKLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + D E+ EM E++ L ++E+EE+LKV+LLP+DP D +N+++E+R GAG
Sbjct: 61 TKEIMHDKATDAELKEMAKMEVEELEESIVEMEEQLKVMLLPTDPNDDKNVIVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A L RMY +Y+E++ WK ++S +E+ GG+K V+ IKG YS+LKYESG
Sbjct: 121 GDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAYSQLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQR+P TE+ GR+HTSTATV IMPEA++V EV ID ++ + RS G GGQ+VN
Sbjct: 181 AHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGNGGQSVNTT 240
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C + ++QL+NK +A+++L+++L + ++EQ +I R S+VGT
Sbjct: 241 DSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRLLDQMIQEQDAEISQDRRSKVGT 300
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
G R+E+IRTYN+ RVTDHR+ + ++L +FLDG I+ + S Q E ++E+
Sbjct: 301 GDRSERIRTYNFPQGRVTDHRINVTVYKLDAFLDGEINEMIDSLITSAQAEKMQEV 356
>gi|424779611|ref|ZP_18206528.1| peptide chain release factor 1 [Alcaligenes sp. HPC1271]
gi|422885619|gb|EKU28063.1| peptide chain release factor 1 [Alcaligenes sp. HPC1271]
Length = 359
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 253/357 (70%), Gaps = 6/357 (1%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
++LE A+ ++ LA+PE+ SN E++KL++ +ELD VV+ ++ ++ E L+
Sbjct: 7 SRLEQLARRLHEVDAMLAEPEIASNMDEFRKLSRERSELDPVVAAFKSYEAAEGDLQ--- 63
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
A++ +D E+ EM E K + +LE++L++LLLP DP D RN+ +E+RAGAGGD
Sbjct: 64 -AAQDMMSDPELKEMGEEEYKLGKERIAQLEDELQILLLPRDPDDTRNVFIEIRAGAGGD 122
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
E+ ++AGDL+RMY +Y+E W+ ++S+S++E GG+K V++ I+G VY +LK+ESG H
Sbjct: 123 ESALFAGDLLRMYMRYAENCGWRTEIMSASDSEVGGYKEVIVRIEGQDVYGRLKFESGAH 182
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVP+TEAQGR+HTST TVA++PEA+ + E+ I+P D+ + T R+ GAGGQ+VNK ++
Sbjct: 183 RVQRVPETEAQGRIHTSTCTVAVLPEAEGLAEITINPADLRVDTFRASGAGGQHVNKTDS 242
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ L H PTG+ + C ++R+Q +N+ +ALQ+L A+L + + REQ +K +R S VGTG
Sbjct: 243 AVRLTHLPTGLVVECQDDRSQHRNREKALQVLAARLKDKQQREQSDKEAAERKSLVGTGD 302
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + ++L +DG++D +++ + Q LL +LA++
Sbjct: 303 RSERIRTYNFPQGRMTDHRINLTLYKLGYIMDGDLDELIKALLSEHQAGLLADLAQA 359
>gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
20731]
gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
20731]
Length = 358
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 238/354 (67%), Gaps = 2/354 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
+ KL+ + DL K++DPEV++ E+ K ++ A+L E+V+ YR++K ++
Sbjct: 5 LDKLQDLEDRYLDLEAKISDPEVIARQEEWLKYTKAHAKLTEIVTVYREYKKLVDTWKDD 64
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
A+ K D+E+ M E++ L L EEKL +LLLP DP D +NI++E+RAGAGG
Sbjct: 65 EAIVKAR-EDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAGAGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA ++AGDL RMY +Y+EQ WK L+ SS GGFK VV + G VYS +K+ESGV
Sbjct: 124 DEAALFAGDLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFESGV 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP TE+QGRVHTST TVA+MPEA EV++ ++P DI + T R+GGAGGQ VNK E+
Sbjct: 184 HRVQRVPDTESQGRVHTSTVTVAVMPEAQEVDIELNPADIRVDTYRAGGAGGQYVNKTES 243
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTGI C +E++Q +N+ + L++LR+++ E + +Q+ +R SQVGTG
Sbjct: 244 AVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQRAATAAERKSQVGTGD 303
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY RVTDHR+ + +L ++G++D + + EQ + L+++
Sbjct: 304 RSERIRTYNYPQGRVTDHRIGLTLHKLPDIINGDLDELLDALMMAEQAKKLQQV 357
>gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
11741]
gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
11741]
Length = 360
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 243/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ +++L L+DP+V+S+ + KL++ MA+L E V Y K+K+ +Q+ +
Sbjct: 4 LFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +G D+EMA ++ E+ + +E ++LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLS-DGLDDEMASLVKEELSNAKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I GN V+SKLKYESG
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMPEEEDVEIELDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ +++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQEQSEYDANRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + EQ + +E+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALILFEQTKAMEKL 357
>gi|386393018|ref|ZP_10077799.1| peptide chain release factor 1 [Desulfovibrio sp. U5L]
gi|385733896|gb|EIG54094.1| peptide chain release factor 1 [Desulfovibrio sp. U5L]
Length = 357
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 252/358 (70%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + + +L +L+DP VV++ Y+KL ++ A+L E+++ +R+ K + LEE
Sbjct: 1 MFAKLESLERKYVELEKQLSDPSVVNDQDRYRKLTKAHADLAEMMAAFREHKRLTQDLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ +A++ D EM E+ +EIK++ L E+E LK+LLLP DP+D +NI+LE+RAG G
Sbjct: 61 NQEMAQDP--DPEMRELALAEIKAIKEALPEIEAHLKLLLLPKDPMDDKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E WK L+S SE GG+K V+ I G++VYS+LKYESG
Sbjct: 119 GEEAALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASISGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV+V +DP D+ + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDVALDPNDLRIDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++Q +NK++AL++LR++L +I+ +Q+ + R SQVGTG
Sbjct: 239 SAVRVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQRLEQEATRRSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ +RVTDHR+ + + L + L+G++D A Q E L+ A++
Sbjct: 299 DRSERIRTYNFPQSRVTDHRINLTLYRLEAVLEGDLDELCDGLIAHYQSEALKAQADA 356
>gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229470350|sp|B2A3J0.1|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 357
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 252/356 (70%), Gaps = 1/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE K +++L ++DPEV+++P + ++ ++ A L+E+V+ YR++ + +++ EE
Sbjct: 1 MLDKLEGIEKRYQELEDLMSDPEVINDPEKLKQYSKEHASLEEIVNKYRQYLETKQEFEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +EN D +M E + EI L N++ E+ + LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AKEMLEENDEDPDMEEFLKDEIPRLENQMQEIYDSLKILLLPKDPNDEKNVIVEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+E +WK ++ S E + GGFK +V I+G YS+LK+ESG
Sbjct: 121 GDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMIEGKNAYSRLKFESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEA++VE+ ID ++ + T + G GGQ+VN +
Sbjct: 181 VHRVQRVPSTESSGRIHTSTATVAVLPEAEDVEIEIDTNELRIDTFCATGPGGQSVNTTQ 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H+PTG+ + C +E++Q +N+ +A+++LRA++Y++ + EQQ++ +R SQVG+G
Sbjct: 241 SAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYLEEQQQQEAEERKSQVGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ R+TDHR+ L L+G ID + + EQ E L+++
Sbjct: 301 DRSERIRTYNFPQGRITDHRINFTTHRLEQVLEGEIDELIDALITTEQAEQLKKMG 356
>gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693362|sp|B4SAR5.1|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 357
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 238/354 (67%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+S + DL L+DP ++ ++KL + ++L E+V Y + + +L+E
Sbjct: 1 MLDKLQSIKEKHLDLEQLLSDPNAAADQVRFRKLNKEYSDLREIVQAYDLYAATKTELDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L K +D EM E++ +EI L +L ELE++LK+LLLP + D+RN+++E+RAG G
Sbjct: 61 SRQLLKSE-SDAEMKELVQAEISELQKKLPELEQQLKILLLPKEEADSRNVIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
G+EA ++A DL RMYQ+Y+E W+C + +E+ GGF+ + + + G+ VY +KYES
Sbjct: 120 GEEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREITLSVNGHDVYGTMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+HTS +VA++PEA+EV+V I +D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAVSVAVLPEAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H PTGI C E+R+QLQNK RA+Q+LR KLY+I++ EQQ++ R S V T
Sbjct: 240 ETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQLAEQQQQRADLRRSMVTT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+ KIRTYNY +RVTDHR+ + L L G++ + + + +Q L+
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIAFTSHALPQILQGDLQDIINALKMHDQAARLQ 353
>gi|365904465|ref|ZP_09442224.1| peptide chain release factor 1 [Lactobacillus versmoldensis KCTC
3814]
Length = 365
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + + +L ++DPEV+++ Y KL++ AE+ +VV+ ++K+K+ +K + +
Sbjct: 4 IFDQLEGLLERYSELQELMSDPEVINDTKRYMKLSKEEAEMRDVVAAFKKYKELKKSISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +EN +D EM + E+ EL ++E + +L+LP DP D +NI++E+R AG
Sbjct: 64 SDEILREN-DDSEMQALAKDELNESKAELEKVEHDITLLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL+ MY KY+E+ W ++ + E GG+K V + I G+RVYSKLKYE+G
Sbjct: 123 GDEASLFAADLLSMYSKYAEKQGWNFEIVDENATEVGGYKDVAVMITGDRVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATVAIMPE DEV+V IDPKDI RS GAGGQ++NK
Sbjct: 183 AHRVQRVPATESAGRVHTSTATVAIMPEYDEVDVDIDPKDIRTDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+LR+++Y+ + Q + QR S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRSRVYDYYESQNQSEYDEQRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G++D + + +Q + LE++
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGDLDEIIDALVVYDQTKKLEQI 357
>gi|350566959|ref|ZP_08935573.1| peptide chain release factor RF1 [Peptoniphilus indolicus ATCC
29427]
gi|348659928|gb|EGY76643.1| peptide chain release factor RF1 [Peptoniphilus indolicus ATCC
29427]
Length = 354
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 245/344 (71%), Gaps = 2/344 (0%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
LE+ + +K L L D ++S+ +YQK A AE++ +V+ YR++K K +++++ +
Sbjct: 5 LEAFEEKFKSLEQDLMDVNIISDSKKYQKTAIEHAEIEPIVNKYREYKTLVKTIKDNKDM 64
Query: 118 AKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEA 177
++N DE + +++ E+K ++L +EE+L++LL+P DP D +N+++E+RAGAGGDEA
Sbjct: 65 LRDNIEDE-LRDLVKEELKDAEDKLEGVEEELRILLIPKDPNDNKNVIMEIRAGAGGDEA 123
Query: 178 GIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRV 237
++AG L R Y +Y+E+ WK +++++E GG+K VV I G YS+LKYESGVHRV
Sbjct: 124 ALFAGVLYRQYVRYAERQGWKTDIMNTNEIGIGGYKEVVFMIIGKGAYSRLKYESGVHRV 183
Query: 238 QRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
QRVP+TE+ GR+HTSTATVA++PE ++VEV IDP +I+ R+ G GGQ VN ++A+
Sbjct: 184 QRVPETESSGRIHTSTATVAVLPEVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVR 243
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
L H PTG+ I C +E++QL+NK +AL++L+ KLY++K+REQQ ++ QR +Q+GTG R+E
Sbjct: 244 LTHIPTGLVISCQDEKSQLKNKEKALKVLKTKLYDLKMREQQGELSDQRSAQIGTGDRSE 303
Query: 358 KIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQ 400
+IRTYNY RVTDHR+ + ++ +DG+ID + + + EQ
Sbjct: 304 RIRTYNYPQGRVTDHRISLTLHKIDQIVDGDIDEIIDALTSAEQ 347
>gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
A2-165]
gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
A2-165]
Length = 356
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 236/351 (67%), Gaps = 1/351 (0%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
+E+ + +++LS++L PE ++P+ +++L Q E + VV Y+ + L +++AL
Sbjct: 1 MEAVSHRFEELSIRLNQPETAADPALFRRLMQEYHEAEPVVQAYQALTTAQDHLAQAKAL 60
Query: 118 AKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEA 177
+ D + EM+ EI S E+ +LE LK+LLLP D D +++++E+R GAGG+EA
Sbjct: 61 LEGETLDPDFKEMVQQEIGEKSQEVAQLENNLKILLLPKDVNDDKSVIMELRGGAGGEEA 120
Query: 178 GIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRV 237
++A L+RMY Y + W+ +++ +E E GG K ++ + G Y++LKYESGVHRV
Sbjct: 121 ALFAHSLMRMYTMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRV 180
Query: 238 QRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
QRVP+TE QGR+HTSTATVA+MP+A+EV++VIDPKD+ + T RS GAGGQ++NK +AI
Sbjct: 181 QRVPETETQGRIHTSTATVAVMPQAEEVDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIR 240
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
+ H PTG+ + C ER+Q QNK +AL++LR++L K +EQQ+ I R QVGTG R+E
Sbjct: 241 VTHIPTGMVVECQNERSQFQNKDKALEVLRSRLLAQKQKEQQDAINANRAGQVGTGDRSE 300
Query: 358 KIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
KIRTYN+ +R TDHR+ + L +DGN+D + + A EQ E L +L
Sbjct: 301 KIRTYNFPQDRCTDHRIGLTVHNLDKIMDGNLDEIIDALATHEQAEKLRQL 351
>gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|119361552|sp|Q1GAX5.1|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 361
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 251/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES ++++ +ADPEV+++ Y ++ + A++ EVV +RKFK ++++
Sbjct: 4 VMAQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAG 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +G+D E+ EM E L +E+ +LE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-DGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E W +++ S + E GG+K + I GN+VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMITGNKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATVA+MPE ++V++ +DPK+I + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVAVMPEYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + ++K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRDKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEVIDALTVYYQTKQLEELAEN 360
>gi|15606216|ref|NP_213594.1| peptide chain release factor 1 [Aquifex aeolicus VF5]
gi|6225940|sp|O67032.1|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
Length = 362
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 169/366 (46%), Positives = 259/366 (70%), Gaps = 5/366 (1%)
Query: 48 CMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDC 107
+ E Y I++L+ + ++ L +L+ PEV+ + +Y+KL++ + EL E+ Y ++K
Sbjct: 1 MLKEAY-ISRLDKLQEKYRKLQEELSKPEVIQDVEKYKKLSKELKELQEINELYERYKKA 59
Query: 108 EKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
+K+L+E++ L K +D+++ E+ E+ L+ E+ +LEE+LKV L+P DP D +N++LE
Sbjct: 60 QKELKEAKELLK--SSDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPNDTKNVILE 117
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAGAGG+EA ++A DL RMYQKY+E+ WK +++SS++ GG+K V+ I+G YS+
Sbjct: 118 IRAGAGGEEAALFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALIEGEGAYSR 177
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LKYESGVHRVQRVP TE+ GR+HTSTATVA++PE DE ++ I P+++++ T R+ GAGGQ
Sbjct: 178 LKYESGVHRVQRVPVTESSGRIHTSTATVAVLPEVDETDIKIKPEELKIETFRASGAGGQ 237
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
VN ETA+ + H PTGI + C +ER+Q QNK +AL++L AKL + R++QE+I +R
Sbjct: 238 YVNTTETAVRITHIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKKQEEIAKERK 297
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
QVGTG R+EKIRTYN+ NRVTDHR+ + ++L L+G +D + + A E ++ L E
Sbjct: 298 EQVGTGERSEKIRTYNFPQNRVTDHRINLTLYKLQDVLEGKLDEIIDALRAKEIEKKL-E 356
Query: 407 LAESVG 412
L E G
Sbjct: 357 LVEKEG 362
>gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386337684|ref|YP_006033853.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280320|dbj|BAK27894.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 359
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A E V+ YR++K + +E+
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ G D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E WK ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q + +R S +GTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEEL 357
>gi|451817456|ref|YP_007453657.1| peptide chain release factor 1 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783435|gb|AGF54403.1| peptide chain release factor 1 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 360
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 243/350 (69%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ +LE + +LSVK++DP ++ N +E++KL + A+L+ +V+ YR++K + LE
Sbjct: 2 LLDRLEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEVIVNAYREYKKVIEDLEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D+EM EM+ EI L+N+ ELE ++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLS-GESDKEMREMLNEEIADLTNKEAELENQIQILLLPKDPNDEKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E W ++S +E + GGFK VV IKGN YSKLKYESG
Sbjct: 121 GEEAALFAYNLFRMYTRYAETQRWSVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++ E D+VE+ + KDI + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTVTVAVLAEVDDVEIEVLDKDIRIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++L+++L+E RE+ E I R SQVGTG
Sbjct: 241 SAVRITHIPSGLVVSCQDEKSQLKNKEKAMKVLKSRLFEQAERERAEGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYNY R+TDHR+ + ++L +FL G++D + S +Q E
Sbjct: 301 DRSERIRTYNYPQGRITDHRIGLTLYKLDAFLGGDLDEMINSLITADQAE 350
>gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
paucivorans DSM 12260]
gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
paucivorans DSM 12260]
Length = 357
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 250/356 (70%), Gaps = 3/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE T+ ++ ++ DP + SN E L + +EL +V+ R+++ +++++
Sbjct: 3 LMGKLEEIESTFSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L + DE + E+ E+ +L ++ LE+++KVLLLP DP DA+++++E+RAGAG
Sbjct: 63 ARELLSQE--DEGLRELAKEELSTLEEQVEPLEQRIKVLLLPQDPNDAKDVVIEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +++E+ W L+S+++ GG+K VV +KG VYSKLKYESG
Sbjct: 121 GEEAALFAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PEA+EV+V + +D+++ T R+ GAGGQ VN +
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLPEAEEVDVQVRTEDLKIDTYRASGAGGQYVNMTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+QL+N+ +A+QLLR +LY++++++QQ + +R QVGTG
Sbjct: 241 SAVRITHVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQAVMAAERKGQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTY+Y NR+TDHR+ ++L LDG++ V++ EQ E L+ LA
Sbjct: 301 DRSERIRTYSYPQNRLTDHRIGFTLYKLDQVLDGDLYELVEALTVAEQTEKLKTLA 356
>gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
Length = 355
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 246/355 (69%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K+ADP+++S E+QKL + + L +V +R++K ++E
Sbjct: 1 MIEKLQVIEEKYLELEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DE+ +++ E+ + +E LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELL-DTDIDEDFEKLVKEELNWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE +++EV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDIEVEIREEDLEIDTFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L LDG +D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGELDEIIDALITHFQTERLKEV 354
>gi|347534613|ref|YP_004841283.1| peptide chain release factor 1 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504669|gb|AEN99351.1| Peptide chain release factor 1 [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 359
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 242/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + +++++ ++DPEV+S+ + KL++ L E V TY+K+++ + L +
Sbjct: 1 MFDKLQSVSDRYEEVNELISDPEVISDTKRFMKLSKEEGNLRETVETYKKYREVTESLND 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +D+ M EM+ +EI L + ELEEKLK++L+P DP D +NI++E+ AG
Sbjct: 61 DQEMLKEKLDDD-MNEMVKAEISDLEEQKTELEEKLKIMLIPKDPNDDKNIIMEIHGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MY KY+E W+ +I E GGFK +V+ I G+ VYSKLK+E+G
Sbjct: 120 GDEASLFAGDLYNMYVKYAETQGWQVQVIDEVPTEVGGFKQIVLMITGDNVYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GRVHTSTATV +MPE ++V++ IDP DI RS GAGGQ++NK
Sbjct: 180 AHRVQRVPETESAGRVHTSTATVGVMPEEEDVDITIDPSDIRTDVYRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+ +A+ +L+A++Y+ ++++++ QR S VGTG
Sbjct: 240 SAVRMTHLPTGIVVAMQDERSQQQNRVKAMNVLKARVYDYYKQKEEDQYNAQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L + G++ + + +Q E +E L ++
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKVMAGDLGEIIDALIVSDQAEKMEHLNDN 357
>gi|335048080|ref|ZP_08541100.1| peptide chain release factor 1 [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333757880|gb|EGL35438.1| peptide chain release factor 1 [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 356
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 249/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + +++L K+ DPE++ + + +QKLA+ ++ +V YR++ +K+LEE
Sbjct: 1 MFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + KE+ +DE M E++ EI L + + + E+ LK+LLLP DP D +N+ +EVRAG G
Sbjct: 61 NKEMLKESLDDE-MKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL+RMY+ ++++ WK ++S SE GG K VV +KG+ YSKLKYESG
Sbjct: 120 GDEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PE ++V+VVI+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPATESSGRIHTSAATVAVLPEVEDVDVVINQNDLRIDVYRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE EQ + I R SQ+G+G
Sbjct: 240 SAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLYEKYQEEQNKDIADARKSQIGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ M ++L SFL+G+I + + + +Q + + +AE
Sbjct: 300 DRSERIRTYNFPQGRVTDHRINMTIYQLDSFLNGDISDMIDALITSDQAKKMLAIAE 356
>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
Length = 358
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 245/352 (69%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ L+DP V+S+ +++++L + AEL E V YR+++ ++++E+
Sbjct: 3 IFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L +++ D +M EM E+ +L +E L EKL +L+LP DP D +NI+LE+RAG G
Sbjct: 63 NRELMRDD--DPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL R Y +Y+E++ WK ++SSSE+ GGFK V+ I G VYS+LKYESG
Sbjct: 121 GDEAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE QGR+HTS TVA++PEA+EV++ I+P D+ + R+ GAGGQ+VNK E
Sbjct: 181 THRVQRVPETETQGRIHTSACTVAVLPEAEEVDLEINPSDLRIDLYRASGAGGQHVNKTE 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +NK+RA+++LR+++ + E+ ++ R SQVG+G
Sbjct: 241 SAVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAMEAEKHAEMAADRKSQVGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ R TDHR+ + ++L + + G++D + Q EL+
Sbjct: 301 DRSERIRTYNFPQGRCTDHRIGLTLYKLDAIMQGDLDEVFDALTTHYQAELM 352
>gi|374337911|ref|YP_005094620.1| peptide chain release factor 1 [Streptococcus macedonicus ACA-DC
198]
gi|372284020|emb|CCF02255.1| Peptide chain release factor 1 [Streptococcus macedonicus ACA-DC
198]
Length = 359
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A E V+ YR++K + +E+
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ G D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E WK ++ +S GG K V++ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q + +R S +GTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEEL 357
>gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
gi|158447387|gb|EDP24382.1| peptide chain release factor 1 [Parvimonas micra ATCC 33270]
Length = 365
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KLE + +++L K+ DPE++ + + +QKLA+ ++ +V YR++ +K+LEE
Sbjct: 10 LFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 69
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + KE+ +DE M E++ EI L + + + E+ LK+LLLP DP D +N+ +EVRAG G
Sbjct: 70 NKEMLKESLDDE-MKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTG 128
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL+RMY+ ++++ WK ++S SE GG K VV +KG+ YSKLKYESG
Sbjct: 129 GDEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESG 188
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PE ++V+VVI+ D+ + R+ G GGQ VN +
Sbjct: 189 VHRVQRVPATESSGRIHTSAATVAVLPEVEDVDVVINQNDLRIDVYRASGNGGQCVNTTD 248
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE EQ + I R SQ+G+G
Sbjct: 249 SAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLYEKYQEEQNKDIADARKSQIGSG 308
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ M ++L SFL+G+I + + +Q + + +AE
Sbjct: 309 DRSERIRTYNFPQGRVTDHRINMTIYQLDSFLNGDISEMIDALITSDQAKKMLAIAE 365
>gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
Length = 356
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 251/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP ++SN E++K + A ++E+V YR++K + +
Sbjct: 1 MIDKLQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINS 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + +++E+ EM E+ L + EL E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI + RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+QLQN+ RAL++LRAKLYE+ ++EQQ++I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKEIAEARKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNV 353
>gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
gi|259585216|sp|C3KYH5.1|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
Length = 358
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 252/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS K++DP V++N E+QKL + A+L+ +V+TYR++K ++ LE
Sbjct: 1 MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE +D+++ EM EIK L+ +L +LE +L +LLLP DP D +++ +E+RAGAG
Sbjct: 61 DKEMLKEE-SDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L+RMY +Y+E+ +WK +S + + GGFK V + IKG YS+LKYESG
Sbjct: 120 GEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ I+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVYRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+A+L+E E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERAASIAEDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY R+TDHR+ + ++L +FLDG+ID +++ +Q E +++L
Sbjct: 300 DRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQAEKMKDLG 355
>gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
Length = 360
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 245/362 (67%), Gaps = 6/362 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P ++ KLE + ++ L PEVVS+ Y+KL + AEL VV+ YR F + +
Sbjct: 3 PSMLAKLEHLSDRLAEIDELLMQPEVVSDQENYRKLNREHAELAPVVALYRDFSQVRQDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ +R + D EM E EI ++ +EE+L+++LLP DP D +NI LE+RAG
Sbjct: 63 DTAREMLA----DPEMKEFAQQEIDGAEKKIAGIEEELQLMLLPKDPDDGKNIYLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ ++AGDL+RMY +++E+N WK ++S+S +E GG++ V++ + G VYS+LK+E
Sbjct: 119 TGGDESALFAGDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRLVGKDVYSRLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE QGR+HTS TVA+MPEAD+V +V I+P DI + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTGI + C ++R+Q +NK++A+Q+L A++ + +++EQQ K R S +
Sbjct: 239 KTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQQAKEAATRKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY RVTDHR+ + ++L +DG++D V + A + LL EL E
Sbjct: 299 GSGDRSERIRTYNYPQGRVTDHRINLTLYKLEFIMDGDMDELVSALVAEHRAGLLAELGE 358
Query: 410 SV 411
SV
Sbjct: 359 SV 360
>gi|343520488|ref|ZP_08757457.1| peptide chain release factor 1 [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343397446|gb|EGV09980.1| peptide chain release factor 1 [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 356
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + +++L K+ DPE++ + + +QKLA+ ++ +V YR++ +K+LEE
Sbjct: 1 MFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L KE+ +DE M E++ EI L + + + E+ LK+LLLP DP D +N+ +EVRAG G
Sbjct: 61 NKELLKESLDDE-MKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL+RMY+ ++++ WK ++S SE GG K VV +KG YSKLKYESG
Sbjct: 120 GDEAGLFAEDLLRMYRMFADKQRWKTEIMSISEQGVGGIKEVVFLVKGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PE ++V+VVI+ D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPATESSGRIHTSAATVAVLPEVEDVDVVINQNDLRIDVYRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++LYE EQ + I R SQ+G+G
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQLKNKDKAMKILKSRLYEKYQEEQNKDIADARKSQIGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ M ++L SFL+G+I + + + +Q + + +AE
Sbjct: 300 DRSERIRTYNFPQGRVTDHRINMTIYQLDSFLNGDISDMIDALITSDQAKKMLAIAE 356
>gi|357636149|ref|ZP_09134024.1| peptide chain release factor 1 [Streptococcus macacae NCTC 11558]
gi|357584603|gb|EHJ51806.1| peptide chain release factor 1 [Streptococcus macacae NCTC 11558]
Length = 360
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 238/354 (67%), Gaps = 1/354 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L+S +++L L+DP++VS+ + +L++ A + E V+ YR++K + + ++
Sbjct: 6 QLQSVEDRYEELGELLSDPDIVSDTKRFMELSREEAAIRETVTAYREYKKILQTISDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ KE+ +D E+ EM E+K+ EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MLKESSDDPELEEMAKEELKTSKGAKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG HR
Sbjct: 126 AALFAGDLLAMYQKYAENQGWKFEVMETSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG R+
Sbjct: 246 RMIHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL +
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALVLYDQTQKLEELGQ 359
>gi|386347700|ref|YP_006045949.1| Peptide chain release factor 1 [Spirochaeta thermophila DSM 6578]
gi|339412667|gb|AEJ62232.1| Peptide chain release factor 1 [Spirochaeta thermophila DSM 6578]
Length = 357
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 240/349 (68%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
++E +K+L LADP V ++ Y++LAQ A L +VV T ++ E +LEE++
Sbjct: 6 RIEELTTRFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARLEEAKT 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ +E +D E+ EM EIK+L E+ E++LK+LL+P DPLD +NI+LE+RAG GG+E
Sbjct: 66 VLEEE-DDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +Y+E+ WK ++ +SE E GGF+ +V I G VY L++ESG HR
Sbjct: 125 AALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQR+P TE+ GR+HTS TVA++PE +E EV I P+DI + RS G GGQ+VN ++A+
Sbjct: 185 VQRIPVTESGGRIHTSAVTVAVLPEPEETEVEIRPEDIRVDVFRSSGPGGQSVNTTDSAV 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +E++Q +NK++AL++LRA+LYE++ + Q+ + R SQ+G+G R+
Sbjct: 245 RITHLPTGLVVSCQDEKSQHKNKAKALKILRARLYEMEKQRQESERAAMRRSQIGSGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ NRVTDHR+ + ++L + +DG++D + + Q+E L
Sbjct: 305 ERIRTYNFPQNRVTDHRINLTLYKLEAVMDGDLDEIIDALRLAVQEEAL 353
>gi|404494363|ref|YP_006718469.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
gi|119361572|sp|Q3A129.1|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|77546366|gb|ABA89928.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
Length = 356
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 240/352 (68%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ L+DP+VVS + +L + AEL VV+ YR++K + +E
Sbjct: 2 IFNKLEEVEDRFREVEGLLSDPQVVSQQKRFLELTREHAELSSVVAVYREYKRVSEDIEG 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L +++ D EM EM +E+ L EL ++LKVLLLP DP D +N++LE+RAG G
Sbjct: 62 NRELLQDS--DPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDKNVILEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +++E WK +S S++E GGFK ++ I GNRVYS+LKYESG
Sbjct: 120 GDEAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGNRVYSQLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVA++PEA++V+V IDP D+ + R+ GAGGQ+VNK E
Sbjct: 180 THRVQRVPETEAQGRIHTSACTVAVLPEAEDVDVDIDPTDLRIDVYRASGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +NK++A+++L++++ + + +QQ ++ R SQVG+G
Sbjct: 240 SAVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMADQQAQMAADRKSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+++IRTYN+ R TDHR+ + + L + GN+ V+ Q E +
Sbjct: 300 DRSQRIRTYNFPQGRCTDHRIGLTLYRLEGIMQGNLSELVEPLTLHYQSEAM 351
>gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
B316]
gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
B316]
Length = 357
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 245/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E + ++D++++L DP V+++ ++KL + L+ +V Y ++K C++ ++E
Sbjct: 1 MFDKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKKCKETIDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ E +D EM EM+ E+++ +++ ELE+KLK+LLLP DP D +N+++E+RAG G
Sbjct: 61 SLAMLDEE-SDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGVG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A D+ R+Y +Y+E+ +W+ +S + GG KTV IKGN YS+LK+ESG
Sbjct: 120 GDEAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTS TVAIMPE ++VEV ID D + R+ G GGQ VN +
Sbjct: 180 VHRVQRIPATESGGRIHTSAITVAIMPEVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++Q QNK++AL++LRAKLYE++ ++ R SQVG+G
Sbjct: 240 SAVRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKKHNNEAELRRSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+ + +++ +DG+ID + S A +Q E L ++ S
Sbjct: 300 DRSEKIRTYNFHQGRVTDHRIGLTLYKIDQIMDGDIDEIIDSLIAADQAEKLSKVENS 357
>gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
WAL-14163]
gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
gi|355625219|ref|ZP_09048116.1| peptide chain release factor 1 [Clostridium sp. 7_3_54FAA]
gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
WAL-14163]
gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
gi|354821406|gb|EHF05793.1| peptide chain release factor 1 [Clostridium sp. 7_3_54FAA]
Length = 357
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 247/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L +L P+V + + ++KL + A+L +V Y+++K + +E+
Sbjct: 1 MFDRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E +DEEM +M E+ + E+E++LK+LLLP DP D +N+M+E+RAGAG
Sbjct: 61 SLALLEEE-SDEEMRDMAKEELADAKKRIEEMEQQLKILLLPKDPNDDKNVMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY ++E N WK L+S +E GGFK VV + G YSK+KYESG
Sbjct: 120 GDEAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTA+VA+MPEA+E +VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTASVAVMPEAEEFDVVIDDKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ ++Q + +R SQ+GTG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNQEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVT+HR+K+ +++ S ++G ++ + S A +Q L ++ E+
Sbjct: 300 DRSEKIRTYNFPQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIAADQAAKLAKMGEN 357
>gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 356
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 251/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP ++SN E++K + A ++E+V YR++K + +
Sbjct: 1 MIDKLQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINS 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + +++E+ EM E+ L + EL E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI + RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+QLQN+ RAL++LRAKLYE+ ++EQQ++I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKEIAEVRKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNV 353
>gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367]
gi|122269414|sp|Q03QX7.1|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
brevis ATCC 367]
Length = 361
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 237/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + L++ EL E V Y +++D +Q+ +
Sbjct: 4 MFDKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQIAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + D +M MI E+K L+ + LEE +KVLLLP DP D +NI++E+ AG
Sbjct: 64 DDEMLHDKL-DADMESMIKDELKELTAQKAALEEDIKVLLLPKDPNDDKNIIMEIHGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W+ ++ + E GGFK +VM I GN+VYSKLKYE+G
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRTDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+Q+LRA++Y+ ++++ +R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDYYKQQEESAYNAERKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D+ + + +Q LE+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDDIIDALIVSDQAAKLEDL 357
>gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter daltonii FRC-32]
gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter daltonii FRC-32]
Length = 356
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 246/358 (68%), Gaps = 5/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L K+E + +++L L+DP V+ N E++KL++ +L +V YR +K ++E
Sbjct: 2 LFDKIEELERRYQELEALLSDPVVLGNQPEFRKLSREHFDLSALVQAYRNYKRIISEIEG 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L D EM EM +E++SL + LE ++K+LLLP DP D ++++LE+RAG G
Sbjct: 62 NRELLA----DPEMKEMAEAELESLEKQRDALESEIKLLLLPKDPNDDKSVILEIRAGTG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +++E N W+ +ISSSE+EKGGFK VV ++G V++KLKYESG
Sbjct: 118 GDEAALFAGDLFRMYSRFAETNRWRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVAIMPEA++V++ I+P D+++ RS GAGGQ+VN +
Sbjct: 178 THRVQRVPETEAQGRIHTSACTVAIMPEAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C EER+Q++N+++A+++L+ ++ + ++EQ K+ R QVG+G
Sbjct: 238 SAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDNILQEQNAKLAADRKQQVGSG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + + L + + G+I + A Q E L+ +E+
Sbjct: 298 DRSERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIAEIADALRAHYQMEALQAQSEA 355
>gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402310221|ref|ZP_10829187.1| peptide chain release factor 1 [Eubacterium sp. AS15]
gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400368673|gb|EJP21680.1| peptide chain release factor 1 [Eubacterium sp. AS15]
Length = 357
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 249/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L + + + +L K++DPE+++N ++QKL + A+L VV Y ++ ++
Sbjct: 1 MFENLGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N +DE++ ++ E+ L +L ++ ++LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKEIIA-NESDEDLRDLAKEELSGLEEDLTKIIDELKILLLPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AG L RMY Y+ WK L+SS+E E GG+K VV I G YS+LK+ESG
Sbjct: 120 GDEAALFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMITGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGR+HTST TVA++PEA++VEV +D D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESQGRIHTSTVTVAVLPEAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I +E++QL+NK +A ++L+AKLY++++ ++Q+++ +QR SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQKEMASQRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
RAE+IRTYNY RV++HR+ +N ++L SFL+G++D + + +Q + L L E+
Sbjct: 300 DRAERIRTYNYPQGRVSEHRIGLNLYKLESFLNGDLDEIIDALITTDQADKLNSLEEN 357
>gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 358
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 238/348 (68%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ +L +P+V ++ ++KL + A+L +V Y ++K ++ + +
Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E +DEEM E+ E+ S + ELE +LK+LLLP DP D +NIM+E+RAGAG
Sbjct: 61 SEEML-EIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A ++ RMY Y+E WK +IS +E GGFK VV + G VYS++KYESG
Sbjct: 120 GDESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVI+ KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+K+ +L S L+G++D + S A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347
>gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
Length = 357
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 243/349 (69%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
++E +K+L LADP + ++ Y++LAQ A L +VV T +++ E +LEE++
Sbjct: 6 RIEELITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARLEEAKT 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ +E +D E+ EM EIK+L ++++ E++LK+LL+P DPLD +NI+LE+RAG GG+E
Sbjct: 66 VLEEE-DDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +Y+E+ WK ++ +SE E GGF+ +V I G VY L++ESG HR
Sbjct: 125 AALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQR+P TE+ GR+HTS TVA++PE +E EV I P+DI + RS G GGQ+VN ++A+
Sbjct: 185 VQRIPVTESGGRIHTSAVTVAVLPEPEETEVEIRPEDIRVDVFRSSGPGGQSVNTTDSAV 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +E++Q +NK++AL++LRA+LYE++ + Q+ + R SQ+G+G R+
Sbjct: 245 RITHLPTGLVVTCQDEKSQHKNKAKALKILRARLYEMEKQRQESERAAMRRSQIGSGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ NRVTDHR+ + ++L + +DG++D + + Q+E L
Sbjct: 305 ERIRTYNFPQNRVTDHRINLTLYKLEAVMDGDLDEIIDALRLAVQEEAL 353
>gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
Length = 357
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 239/356 (67%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ W+D+ +L++P+ + + + L + +L ++V Y+ +K+ +E
Sbjct: 1 MLEKLEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKVYKNVMSNIEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + D EM EM E+ L + ELEEK++++L+P DP DA+N + E+R G G
Sbjct: 61 NKEILSTE-KDAEMREMAKEELDLLLVQQEELEEKVRLMLIPVDPEDAKNAVFEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY ++ EQ WK + +E GG+K V++++ G VY +LKYESG
Sbjct: 120 GDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTS A+VA++PEA+E+++ I+P DI+L T+RSGGAGGQNVNKVE
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEIDLYINPADIDLQTSRSGGAGGQNVNKVE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L H+P+GI + C +ER+QL N+ A+++LR+KLY+I+++++ I +R + V TG
Sbjct: 240 TKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKNGDIAARRKTMVSTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+ KIRTYNY RVTDHR+ + + L S +DG + + + E E L+E A
Sbjct: 300 DRSAKIRTYNYPQGRVTDHRIGLTLYNLNSIMDGGVQELIDALQFAENAEKLKEGA 355
>gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
gi|167656210|gb|EDS00340.1| peptide chain release factor 1 [Eubacterium siraeum DSM 15702]
gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
siraeum 70/3]
gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
siraeum V10Sc8a]
Length = 358
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 232/344 (67%), Gaps = 1/344 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE K + +++ KL D V+++ +Y+ L + + L ++ YR +K EE
Sbjct: 1 MTEKLEITEKRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + + G D++ E++ + +S + E ++LK+LLLP DP D RN+++E+R GAG
Sbjct: 61 AEQMLSDGGLDKDFKEIVQEQYESNKKLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A + RMY Y++ WK +ISS+ E GG+K + ++G VY+KLKYESG
Sbjct: 121 GEEAALFANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TEAQGR+ TST TVA++PE +EV+V I+P D+E T RS GAGGQ++NK E
Sbjct: 181 VHRVQRVPETEAQGRIQTSTITVAVLPEVEEVDVEINPADLEFQTYRSSGAGGQHINKTE 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C EER+Q +NK +A+++L +KLYE K+ EQ KI +R QVGTG
Sbjct: 241 SAIRIIHHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLNEQNSKIAAERKIQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCA 396
R+E+IRTYNY +RVTDHR+ + ++L F++G+ D + A
Sbjct: 301 DRSERIRTYNYPQSRVTDHRIGLTLYKLEQFMNGDCDEVFDALA 344
>gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 356
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 241/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ +L +P+V ++ ++KL + A+L +V Y ++K ++ + +
Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E +DEEM E+ E+ S + ELE +LK+LLLP DP D +NIM+E+RAGAG
Sbjct: 61 SEEML-EIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A ++ RMY Y+E WK +IS +E GGFK VV + G VYS++KYESG
Sbjct: 120 GDESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVI+ KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +L S L+G++D + S A +Q L + E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQAAKLSNMNE 356
>gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
Length = 362
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K +K+LE+
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELED 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N +DE++ EM E + E+ ELE+++K+L+LP DP D ++I++E+ AG
Sbjct: 64 NKKIIA-NESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIHGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ WK +LI S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|423080184|ref|ZP_17068815.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
gi|357543845|gb|EHJ25858.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
Length = 381
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 26 IFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 85
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ DE+M + +++ L + +LEEK+KVL+LP DP D +NI++E+R AG
Sbjct: 86 SEEVLRES-KDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 144
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK ++ S+ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 145 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 204
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 205 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 264
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q +N++RA+Q+LR+++Y+ E QEK R + +GTG
Sbjct: 265 SAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTG 324
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 325 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 379
>gi|366086231|ref|ZP_09452716.1| peptide chain release factor 1 [Lactobacillus zeae KCTC 3804]
Length = 359
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 238/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + +L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLDRYDELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ DE+M + ++ L + +LE+K+KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDEDMEALAKEDLDDLQKQKADLEDKIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK +I S+ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKAEIIDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q +N++RALQ+LR+++Y+ + QEK R + +GTG
Sbjct: 243 SAVRMTHIPTGIVVSMQDERSQQENRARALQILRSRVYDYYETQNQEKYDQTRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G++D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGDLDEIIDALIVHDQAQKMESL 357
>gi|354806827|ref|ZP_09040306.1| peptide chain release factor 1 [Lactobacillus curvatus CRL 705]
gi|354514618|gb|EHE86586.1| peptide chain release factor 1 [Lactobacillus curvatus CRL 705]
Length = 365
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 242/363 (66%), Gaps = 2/363 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S + +L ++DPEV++ S Y +L++ A L E+V Y + K + E
Sbjct: 4 MFEQLDSLLDRYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRLKTVLNDIAE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S L +E+ ND EM E+ +++ L +E +LE+ +K+L+LP+DP D +NI++E+R AG
Sbjct: 64 SEELLRES-NDPEMEELAKADLSELQDEKEQLEQDIKILMLPTDPNDEKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ+Y+E +W+ +I + E GGFK V M I G VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P+TE+QGRVHTSTATVA+MPE D V+V +DPKDI R+ GAGGQ++NK
Sbjct: 183 AHRVQRIPKTESQGRVHTSTATVAVMPEYDGVDVQLDPKDIRTDVYRASGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q + + R S VG+G
Sbjct: 243 SAVRMTHIPTGIVVAMQDQRSQQQNRVKAMQILQSRVYDFYESQNQSEYDSSRKSAVGSG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R+E+IRTYNY NRVTDHR+ + +L ++G + + + + +Q E LE+L +
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGDVIDALILYDQTEKLEQLQDGTA 362
Query: 413 APS 415
S
Sbjct: 363 HLS 365
>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
Length = 386
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 31 IFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 90
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ DE+M + +++ L + +LEEK+KVL+LP DP D +NI++E+R AG
Sbjct: 91 SEEVLRES-KDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 149
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK ++ S+ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 150 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 209
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 210 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 269
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q +N++RA+Q+LR+++Y+ E QEK R + +GTG
Sbjct: 270 SAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTG 329
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 330 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 384
>gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
Length = 357
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 245/357 (68%), Gaps = 1/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ + ++ L+ L DP+V+S+ + + ++ ++++E V T+R++K+ +KQ +
Sbjct: 1 MFDRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + KE D+EM EM+ E+ L +++ LEEKL+VLLLP DP D +N+++E+R AG
Sbjct: 61 AKTMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E W+ +I +SE + GG+K ++ I G YSK+KYE+G
Sbjct: 121 GDEAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PEA+EVEV I+ KDI + T S G GGQ+VN
Sbjct: 181 AHRVQRVPTTESGGRIHTSTATVAVLPEAEEVEVDINEKDIRVDTFASSGPGGQSVNTTM 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E + + R S VGTG
Sbjct: 241 SAVRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRKEAEAEYAQNRKSAVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ +RVTDHR+ + + L L+G +D + EQ ++EE E
Sbjct: 301 DRSERIRTYNFPQSRVTDHRIGLTLQKLDQILEGKLDEITDALIVEEQSRMMEEAGE 357
>gi|421769637|ref|ZP_16206343.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|421771458|ref|ZP_16208118.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
gi|411184142|gb|EKS51276.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|411186044|gb|EKS53170.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
Length = 386
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 31 IFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 90
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ DE+M + +++ L + +LEEK+KVL+LP DP D +NI++E+R AG
Sbjct: 91 SEEVLRES-KDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 149
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK ++ S+ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 150 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 209
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 210 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 269
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q +N++RA+Q+LR+++Y+ E QEK R + +GTG
Sbjct: 270 SAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTG 329
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 330 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 384
>gi|418070392|ref|ZP_12707667.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
gi|357539812|gb|EHJ23829.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
Length = 359
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ DE+M + +++ L + +LEEK+KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK ++ S+ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q +N++RA+Q+LR+++Y+ E QEK R + +GTG
Sbjct: 243 SAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYLQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 357
>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|385827838|ref|YP_005865610.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|385835027|ref|YP_005872801.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|355394518|gb|AER63948.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
Length = 359
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ DE+M + +++ L + +LEEK+KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK ++ S+ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q +N++RA+Q+LR+++Y+ E QEK R + +GTG
Sbjct: 243 SAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQEKYDQNRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 357
>gi|357638529|ref|ZP_09136402.1| peptide chain release factor 1 [Streptococcus urinalis 2285-97]
gi|418416401|ref|ZP_12989600.1| peptide chain release factor 1 [Streptococcus urinalis FB127-CNA-2]
gi|357586983|gb|EHJ56391.1| peptide chain release factor 1 [Streptococcus urinalis 2285-97]
gi|410874219|gb|EKS22150.1| peptide chain release factor 1 [Streptococcus urinalis FB127-CNA-2]
Length = 360
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + L++ A + + V+TYR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMSLSKEEASIRDTVTTYREYKQVLQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D E+ EM E+K + EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEDMLKETSGDAELEEMAKEELKDSKQTKDDYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKFAESQGWKFEIMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|406939535|gb|EKD72535.1| hypothetical protein ACD_45C00649G0003 [uncultured bacterium]
Length = 360
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 249/361 (68%), Gaps = 6/361 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + KL+S + ++LS LADP+V+ + ++ ++ A+L+ +V+ +++FK C
Sbjct: 3 PSIEKKLQSLIERHEELSALLADPDVIGEQNRFRDYSKEYAQLEPIVAVFKRFKICVSDQ 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E ++ L KE D E+ E+ E+K+ +LE+ L+VLLLP DP D NI LE+RAG
Sbjct: 63 EGAQELLKEA--DPELQELAKQELKNAEALQAKLEQDLQVLLLPRDPHDESNIFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
AGGDEA I+AGDL RMY +Y+E W+ +IS+S +E+GG+K +++ I G YS+LK+E
Sbjct: 121 AGGDEAAIFAGDLSRMYTRYAETQGWQVEVISASTSEQGGYKEIILRIVGQGAYSRLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SGVHRVQRVP+TEAQGR+HTST T+A+MPE DEVE + I+P D+ + T R+ GAGGQ+V
Sbjct: 181 SGVHRVQRVPETEAQGRIHTSTCTIAVMPEVDEVEAIDINPADLRIDTFRASGAGGQHVQ 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLY-EIKVREQQEKIRTQRLSQ 349
K ++AI + H PTG + C +ER+Q +N++RA+ LL+AKL E + ++QQ++ T+R
Sbjct: 241 KTDSAIRITHLPTGTVVECQDERSQHKNRARAMSLLKAKLLAEERNKQQQQQAETRR-HL 299
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+E+IRTYN+ R+TDHR+ + ++L + ++G++ V + Q +LL EL
Sbjct: 300 VGTGDRSERIRTYNFPQGRLTDHRINLTLYKLPAIMNGDLAEVVNTLIHEHQADLLAELG 359
Query: 409 E 409
E
Sbjct: 360 E 360
>gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389853747|ref|YP_006355991.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166223566|sp|A2RIR4.1|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 357
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LES +++L L+DPEVVS+ + +L++ A+L + V+TY ++K + + +
Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E G D+EM EM+ E+ S ++ LEE++K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ +SE WK ++ ++ GG+K V I G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ I+ KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIEQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K T+R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNTERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEEL 355
>gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
Length = 360
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/360 (44%), Positives = 245/360 (68%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P ++ KLE A ++ L P+V S+ Y+KL++ AEL VV+ Y + + +
Sbjct: 3 PSMLAKLEQLANRLTEIDELLMQPDVASDQDNYRKLSKEHAELGPVVALYNDYVQVQADV 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ A+E D EM E EI + ++ +E+ L+++LLP DP D +NI LE+RAG
Sbjct: 63 DA----AQEMLADPEMKEFAQEEISAAEGKMTAIEDDLQLMLLPKDPNDDKNIFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ ++A DL+RMY +++E+N WK ++S+SE+E GG++ V++ + GN VYS+LK+E
Sbjct: 119 TGGDESALFAADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRLIGNDVYSRLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE QGR+HTS TVA+MPEAD+V +V I+P DI + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPVTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H PTGI + C ++R+Q +NK++A+Q+L A++ + +++EQ K R S +
Sbjct: 239 KTDSAIRITHFPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQHAKEAATRKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY RVTDHR+ + ++L +DG++D V + AA + ELL E+AE
Sbjct: 299 GSGDRSERIRTYNYPQGRVTDHRINLTLYKLEFIMDGDMDELVNALAAEHRAELLAEMAE 358
>gi|336064201|ref|YP_004559060.1| peptide chain release factor 1 [Streptococcus pasteurianus ATCC
43144]
gi|334282401|dbj|BAK29974.1| peptide chain release factor 1 [Streptococcus pasteurianus ATCC
43144]
Length = 359
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A E V+ YR++K + +E+
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ G D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDAGGDPELEEMAKEELKDSKASKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL++MYQKY+E WK ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFASDLLQMYQKYAENQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q + +R S +GTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEEL 357
>gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
Length = 359
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A E V+ YR++K + +E+
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEANTRETVTVYREYKQILQNIED 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ G D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDAGGDPELEEMAKEELKDSKASKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL++MYQKY+E WK ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFASDLLQMYQKYAENQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q + +R S +GTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEEL 357
>gi|418618975|ref|ZP_13181818.1| peptide chain release factor 1 [Staphylococcus hominis VCU122]
gi|374825836|gb|EHR89755.1| peptide chain release factor 1 [Staphylococcus hominis VCU122]
Length = 358
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DPE+V++P + +K ++ A+L + V YR +K +++ E
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E L +EL ELEE+LK LL+P DP D +++++E+RA AG
Sbjct: 61 IDEMLTETDDKEEI-EMLKEEASGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E ++K ++ ++E++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ + +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I + E++Q+QN+ +AL++L+A+LY++K++E+Q+K QR S VGTG
Sbjct: 240 SAVRITHIPTGI-IATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E++RTYNY +RVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 299 DRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKEL 353
>gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 360
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LES + K L +ADPEV+ + S+ Q +A+ EL E+++ Y ++K +Q+EE
Sbjct: 5 FLVQLESIEEKVKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVSRQIEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +D+ + +LE+K+++ LLP DP D +N++LE+R GAG
Sbjct: 65 VKQLLNSTPDDDLRELAEEELESLKKQQE-DLEKKIEIALLPKDPNDEKNVILEIRQGAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMYQ+Y+E++ WK ++S EKGG K V+ IKG YS+LKYESG
Sbjct: 124 GDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA++PEA+EV++ I P+++++ T R+GGAGGQ+VN +
Sbjct: 184 VHRVQRVPETESSGRIHTSTVTVAVLPEAEEVDIEIKPEELKIETMRAGGAGGQHVNTTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+QLQNK +A+Q+LRA+L + R ++EKI +R QVGTG
Sbjct: 244 SAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERLEKEKIAKERKEQVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+ NRVTDHR+ ++ + +DG++D + A E +E L L
Sbjct: 304 ERSEKIRTYNFPQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKENEEKLANL 358
>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
Length = 358
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 243/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L +L +P+V ++ + ++KL + ++L +V Y ++K ++ + +
Sbjct: 3 MFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAITD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E +DEEM E+ E+ S + ELE +LK+LLLP DP D +NIM+E+RAGAG
Sbjct: 63 SEEML-EMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A ++ RMY Y+E WK +IS SE GGFK VV + G VYS++KYESG
Sbjct: 122 GDESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 182 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +QQ R SQ+GTG
Sbjct: 242 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVT+HR+K+ +++ + ++G++D + S A +Q L + E
Sbjct: 302 DRSEKIRTYNFPQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIAADQAAKLANMNE 358
>gi|409385139|ref|ZP_11237839.1| Peptide chain release factor 1 [Lactococcus raffinolactis 4877]
gi|399207380|emb|CCK18754.1| Peptide chain release factor 1 [Lactococcus raffinolactis 4877]
Length = 357
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ A +++L L+DPEVV++ + L++ A L E V+ Y ++ + + +
Sbjct: 1 MFDQLQIMADRYEELGGLLSDPEVVNDTKRFMALSKEEASLRETVAAYARYVEVTTGISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ D + A+M E+K+L E LEE +K+LLLP DP D +NI+LE+R AG
Sbjct: 61 AEEMLSDSSLDADEADMFKEELKALKAEKATLEEDIKILLLPKDPNDDKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKYSE WK ++ S+ E GG K V + I GN VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLAMYQKYSENQGWKFEILESNVTEIGGIKEVSVMISGNSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE QGRVHTSTATV +MPE ++ ++ IDPKD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPKTETQGRVHTSTATVLVMPEIEDFDIDIDPKDLRIDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H+PTGI++ EER Q +N+ +A++++ A++Y+ + +Q+K R S VGTG
Sbjct: 241 TAVRIVHEPTGIKVEMQEERNQQKNRDKAMKIINARVYDYFAQIEQDKNDEFRKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LE L
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALILFDQTQKLEAL 355
>gi|347751863|ref|YP_004859428.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
gi|347584381|gb|AEP00648.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
Length = 356
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 244/353 (69%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DPE+V++P + ++ ++ ++L E V YR++K+ +KQL++
Sbjct: 1 MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L E D EM +M+ EI L +++ E EE+LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKSLLSEK-LDPEMKDMVKEEIHELESKIPEYEERLKILLLPKDPNDEKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I ++ GG+K +V + G YSKLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVEV I+ KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEVDINEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L LDG +D + + +Q + LE
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALILEDQSKKLE 352
>gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
prausnitzii SL3/3]
Length = 361
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
+++++ + +++LS++L P+ ++P+ ++KL + + + VV YR ++ L +++
Sbjct: 6 SRMDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTALDHLAQAK 65
Query: 116 ALAKENGN-DEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
AL +E G+ D + +MI EI S ++ +LE LK+LLLP D D +N+++E+R+GAGG
Sbjct: 66 ALLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIMEIRSGAGG 125
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
+EA ++A L+RMY Y++ W L++ +E E GG K ++ + G Y++LKYESGV
Sbjct: 126 EEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESGV 185
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP+TE QGR+HTSTATVA+MP+A+EV+ +D KD+ + T RS GAGGQ++NK +
Sbjct: 186 HRVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHINKTSS 245
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
AI + H PTG + C ER+Q QNK +AL++LR++L K +EQQ+ I QR QVGTG
Sbjct: 246 AIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRLLAQKQKEQQDAINAQRQGQVGTGD 305
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+EKIRTYN+ +R TDHR+ + L +DGN+D + + A EQ E L++L
Sbjct: 306 RSEKIRTYNFPQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQTEKLQKLG 360
>gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
hominis C80]
gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
hominis C80]
Length = 358
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 251/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DPE+V++P + +K ++ A+L + V YR +K +++ E
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E L EL ELEE+LK LL+P DP D +++++E+RA AG
Sbjct: 61 IDEMLTETDDKEEI-EMLKEEASGLKGELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E ++K ++ ++E++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ + +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I + E++Q+QN+ +AL++L+A+LY++K++E+Q+K QR S VGTG
Sbjct: 240 SAVRITHIPTGI-IATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E++RTYNY +RVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 299 DRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKEL 353
>gi|355678549|ref|ZP_09061040.1| peptide chain release factor 1 [Clostridium citroniae WAL-17108]
gi|354812503|gb|EHE97119.1| peptide chain release factor 1 [Clostridium citroniae WAL-17108]
Length = 357
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 242/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L + L DP V + + +L + A+L +V Y+++K ++ +E+
Sbjct: 1 MFDKLDDMLIHYEELMLMLGDPAVTQDTKRFTRLMKEQADLAPIVDAYKQYKQAKQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E +D+EM EM E+ + +LE +LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLALLEEE-SDDEMREMAKEELSDAKKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y++ WK ++S +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFASELYRMYSGYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA++V+V ID DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEDVDVQIDMNDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H P+GI I+ E++QLQNK +A +LLR+KLY+I++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHMPSGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + + A +Q L ++ E+
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLAKMNEN 357
>gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
Length = 380
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 248/376 (65%), Gaps = 8/376 (2%)
Query: 32 RNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSM 91
R+++ ++SF K ++ KLE+ W+D+ +L++P+ + + + L +
Sbjct: 8 RDLIGKTISFNFLK------KDMLEKLEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEY 61
Query: 92 AELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKV 151
+L ++V Y+ +K+ +E ++ + N D E+ EM E+ L + E+EEK+++
Sbjct: 62 KDLGKIVDEYKIYKNVMSNIEANKEILS-NEKDAELREMAKEELDLLLKQQEEMEEKVRL 120
Query: 152 LLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGG 211
+L+P DP DA+N + E+R G GGDEA ++AGDL RMY ++ EQ WK + +E GG
Sbjct: 121 MLIPVDPEDAKNAVFEIRGGTGGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGG 180
Query: 212 FKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDP 271
+K V++++ G VY +LKYESGVHRVQRVP TE QGRVHTS A+VA++PEA+E+++ I+P
Sbjct: 181 YKEVILKVSGEDVYGQLKYESGVHRVQRVPDTETQGRVHTSAASVAVLPEAEEIDLYINP 240
Query: 272 KDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLY 331
DI+L T+RSGGAGGQNVNKVET + L H+P+GI + C +ER+QL N+ A+++LR+KLY
Sbjct: 241 ADIDLQTSRSGGAGGQNVNKVETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLY 300
Query: 332 EIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDN 390
+I+++++ I +R + V TG R+ KIRTYNY RVTDHR+ + + L+ +DG +
Sbjct: 301 DIELQKKNGDIAARRKTMVSTGDRSAKIRTYNYPQGRVTDHRIGLTLYNLSGVMDGGVQE 360
Query: 391 AVQSCAAMEQKELLEE 406
+ + E E ++E
Sbjct: 361 LIDALQFAENAEKMKE 376
>gi|313672261|ref|YP_004050372.1| peptide chain release factor 1 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
nitroreducens DSM 19672]
Length = 356
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE + + +L+ KLADP V+S+ YQ+L++ ++L +V Y ++KD ++ ++E
Sbjct: 1 MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ K +G D+++ E+ E+ +L ++ E+LK+LLLP DP D +NI +E+RAG G
Sbjct: 61 AEAILK-DGGDKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+E+ ++A DL+RMY +Y+E+ WK +I ++E GG+K V++ +KG YSKLKYE+G
Sbjct: 120 GEESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYEAG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P+TE+ GR+HTS TVA++PEAD+V+V IDPKD+ + RS GAGGQ+VN +
Sbjct: 180 GHRVQRIPETESSGRIHTSACTVAVIPEADDVDVHIDPKDLRIDVYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++NK +A++LL++K++E+++ Q+ + R QVG+G
Sbjct: 240 SAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQAENRKQQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ NR+TDHR+ + + L ++G +D + + +Q E L+ +
Sbjct: 300 DRSERIRTYNFPQNRLTDHRINLTVYNLDMVMEGELDEIIDALITYDQAEKLKNIG 355
>gi|417936018|ref|ZP_12579335.1| peptide chain release factor 1 [Streptococcus infantis X]
gi|343402927|gb|EGV15432.1| peptide chain release factor 1 [Streptococcus infantis X]
Length = 359
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|392949348|ref|ZP_10314931.1| Peptide chain release factor 1 [Lactobacillus pentosus KCA1]
gi|334882101|emb|CCB83057.1| peptide chain release factor 1 (RF-1) [Lactobacillus pentosus
MP-10]
gi|339639302|emb|CCC18542.1| peptide chain release factor 1 (RF-1) [Lactobacillus pentosus IG1]
gi|392435461|gb|EIW13402.1| Peptide chain release factor 1 [Lactobacillus pentosus KCA1]
Length = 360
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 237/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
KL++ A +++L L+DP+V+++ + KL++ M L E V Y +K+ Q+EE
Sbjct: 4 FFDKLQAVADRYEELGELLSDPDVIADSQRFMKLSKEMGNLRETVEKYNHYKEVTSQIEE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L E +DE M M+ ++K+L+ E +LE ++ +L+LP DP D +NI++E+ AG
Sbjct: 64 NDELLHEKLDDE-MNAMVKDDLKNLNAEKDQLEHEITLLMLPKDPNDDKNIIMEIHGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W+ + +E E GGFK +V+ I G++VYSKLKYESG
Sbjct: 123 GDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDKVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA +V++ IDPKDI RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEAQDVDIDIDPKDIRTDVFRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++LRA++Y+ +Q + +R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDYYQSREQNEYDAERKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + +L ++G +D + + +Q E +E L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELDEVIDALVLADQAEKMERL 357
>gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
M21/2]
gi|158443098|gb|EDP20103.1| peptide chain release factor 1 [Faecalibacterium prausnitzii M21/2]
Length = 361
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 240/355 (67%), Gaps = 2/355 (0%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
+++++ + +++LS++L P+ ++P+ ++KL + + + VV YR ++ L +++
Sbjct: 6 SRMDAVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTALDHLAQAK 65
Query: 116 ALAKENGN-DEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
AL +E G+ D + +MI EI S ++ +LE LK+LLLP D D +N+++E+R+GAGG
Sbjct: 66 ALLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIMEIRSGAGG 125
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
+EA ++A L+RMY Y++ W L++ +E E GG K ++ + G Y++LKYESGV
Sbjct: 126 EEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNRLKYESGV 185
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP+TE QGR+HTSTATVA+MP+A+EV+ +D KD+ + T RS GAGGQ++NK +
Sbjct: 186 HRVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHINKTSS 245
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
AI + H PTG + C ER+Q QNK +AL++LR++L K +EQQ+ I QR QVGTG
Sbjct: 246 AIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRLLAQKQKEQQDAINAQRQGQVGTGD 305
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+EKIRTYN+ +R TDHR+ + L +DGN+D + + A EQ E L+ L
Sbjct: 306 RSEKIRTYNFPQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQTEKLQRLG 360
>gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
Length = 359
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 243/341 (71%), Gaps = 3/341 (0%)
Query: 72 LADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMI 131
L+DPEV+ N +E++KL++ + L E+V+ YR++K +++++ L KE D+EM EM
Sbjct: 21 LSDPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEP--DQEMREMA 78
Query: 132 ASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKY 191
+E+ SL LE ++K+LLLP DP D +N++LE+RAG GGDE+ ++AGDL RMY ++
Sbjct: 79 QAELLSLEARREVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRF 138
Query: 192 SEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHT 251
+E N W+ +IS+SE+EKGGFK V+ ++G V++KLKYESG HRVQRVP+TEAQGR+HT
Sbjct: 139 AETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHT 198
Query: 252 STATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTE 311
S TVA+MPEA++V++ I+P D+++ RS GAGGQ+VN ++A+ + H PTG + C E
Sbjct: 199 SACTVAVMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258
Query: 312 ERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTD 371
ER+Q++N+++A+++L++++ + V EQ K+ R SQVG+G R+E+IRTYN+ R+TD
Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNIVMEQNAKLAADRKSQVGSGDRSERIRTYNFPQGRMTD 318
Query: 372 HRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
HR+ + + L + + G+I S Q E L+ +E +
Sbjct: 319 HRIGLTLYRLDAIMAGDIAEIADSLRQHYQMEALQAQSEGM 359
>gi|357237276|ref|ZP_09124619.1| peptide chain release factor 1 [Streptococcus criceti HS-6]
gi|356885258|gb|EHI75458.1| peptide chain release factor 1 [Streptococcus criceti HS-6]
Length = 359
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 237/354 (66%), Gaps = 1/354 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + ++++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEASTRETVTVYREYKQVLQTIDDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ G D E+ EM E+K + EE+LK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDAGGDPELEEMAKEELKDAKAAKEDYEERLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG HR
Sbjct: 126 AALFAGDLLNMYQKYAESQGWRFEIMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL +
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALVLYDQTKKLEELTQ 359
>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
gi|238692126|sp|B3E628.1|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
Length = 355
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 249/361 (68%), Gaps = 7/361 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K++ +++L L+DP V++N E++KL++ A+L ++ +R++K +LEE
Sbjct: 1 MFDKIQDLEIRFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L D EM EM EI LS E L+ ++K+LLLP DP D+R+++LE+RAG G
Sbjct: 61 NQELLA----DPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ +++GDL RMY +++E+N WK ++S SE+E+GG+K V+ I+G VY+KLKYESG
Sbjct: 117 GDESALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVAIM EA++V++ I+P D+++ RS GAGGQ+VN +
Sbjct: 177 THRVQRVPETEAQGRIHTSACTVAIMAEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTD 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C EER+Q++N+++A+++L+ ++ + +EQ K+ R QVG+G
Sbjct: 237 SAVRITHIPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIQQEQNAKLAADRKQQVGSG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R+E+IRTYN+ R+TDHR+ + + L S + G+I+ + A Q E L+ A+S G
Sbjct: 297 DRSERIRTYNFPQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRAHYQMEALK--AQSEG 354
Query: 413 A 413
A
Sbjct: 355 A 355
>gi|376295460|ref|YP_005166690.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
Length = 355
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 243/352 (69%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + + L +LA+P++ ++ Y+K++++ A+L EVV +R++K ++L++
Sbjct: 1 MFGKLEEIEEKYVLLEQELAEPDIFNDQERYKKVSKAHADLSEVVEAFRRYKQLSQELDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + N D E+ EM +EI L EL E+EE+LKVLLLP DP+D +NI+LE+RAG G
Sbjct: 61 NREML--NDADPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEKNIILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+E N WK +S++ GG+K V+ I G++VYSKLKYESG
Sbjct: 119 GDEAALFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGDKVYSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV++ + P+D+ + RS G GGQ+VN +
Sbjct: 179 THRVQRVPATESQGRIHTSAVTVAIMPEAEEVDIDLRPEDLRVDVFRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H P+G+ + C +E++Q +NK++AL++LR++L +I+ + + + R SQVG+G
Sbjct: 239 SAIRVTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQEANRRSQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RV+DHR+ + +L ++G + + + + Q E L
Sbjct: 299 DRSERIRTYNYPQGRVSDHRINLTLHQLPQIMEGELQDLTDALISYFQAEAL 350
>gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|238054474|sp|B5YIQ7.1|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 353
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 243/355 (68%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL ++ ++ L+DP+V SN EY K ++ AEL+ +V+ +R++K KQ+EE
Sbjct: 1 MLEKLMEVENKYEKITQTLSDPKVFSNKDEYMKYSREQAELEPIVTKFREYKRILKQIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K D ++ E+ E++ L ++E++LKVLLLP DP D +N++LE+RAG G
Sbjct: 61 AEEMIK--SGDPDLKELAEEELQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY KY+E WK +I S GGFK ++ I G +SKLKYESG
Sbjct: 119 GEEAALFAANLFRMYAKYAESKGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PEA+EV++ ID KD+ + T S G GGQ+VN
Sbjct: 179 VHRVQRIPVTEASGRIHTSTATVAVLPEAEEVDIKIDEKDLRIDTFCSSGPGGQSVNTAY 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++N+ +A+++LRA+L EI+ ++++ + +R QVGTG
Sbjct: 239 SAVRIVHIPTGIIVQCQDERSQIKNREKAMKVLRARLLEIERQKKEAERAAERKGQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + ++L L+GNID + + + Q E L+E+
Sbjct: 299 ERSERIRTYNFPQNRVTDHRIGLTLYKLEQVLNGNIDEIIDALISYYQAEKLKEM 353
>gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
5265]
gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
5265]
Length = 360
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 248/347 (71%), Gaps = 2/347 (0%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGND 124
++ L L +PE+ S+P + KL + ++LD ++ ++ + +E ++A+ +E G
Sbjct: 14 YESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYRKLIRDIESAKAILEEPGE- 72
Query: 125 EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
+E+ E+ E+++L + L + E++LK+LL+ DP+D + +++E+RAG GG+EA ++AGDL
Sbjct: 73 DELKELAEEELRNLEDILPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEAALFAGDL 132
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
RMY +Y+E+ WK L+ S+ + GGFK VV ++G+RVYS+LKYESGVHRVQRVP+TE
Sbjct: 133 FRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRVQRVPETE 192
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
+ GR+HTSTATVA++PE DEVE+ I+ +D+E+ T R+GG GGQNV K ETA+ + HKPTG
Sbjct: 193 SSGRIHTSTATVAVLPEVDEVEIEINEEDLEIDTFRAGGHGGQNVQKNETAVRIKHKPTG 252
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
I + C +ER+QLQNK +AL++LRAKLYE ++ E+Q+ + + R S +G+ R EKIRTYN+
Sbjct: 253 IVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQKSMSSFRRSLIGSAERGEKIRTYNF 312
Query: 365 KDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
NRVTDHR+ + L FLDG++D + + +++ L E+ ES
Sbjct: 313 MQNRVTDHRINYTIYYLDRFLDGDLDEMIDALETADRETRLLEMDES 359
>gi|408789820|ref|ZP_11201461.1| Peptide chain release factor 1 [Lactobacillus florum 2F]
gi|408520842|gb|EKK20864.1| Peptide chain release factor 1 [Lactobacillus florum 2F]
Length = 368
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 244/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + + +L+ ++DPEV+++ + KL++ L E V TY +++ +L
Sbjct: 9 IYDKLQSVSDRYDELNELISDPEVIADTERFMKLSKEEGSLRETVETYNRYQQVTNELAS 68
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E +DE M+ M+ SE+ L +LE +LK+LL+P+DP D +NI++E+ AG
Sbjct: 69 DQELLQEKLDDE-MSTMVKSELAELETAKTDLENQLKLLLIPTDPNDEKNIIMEIHGAAG 127
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W+ +I ++ E GGFK +V+ I G++VYSKLKYE+G
Sbjct: 128 GDEASLFAADLYNMYVKYAEKQHWQVEIIDEADTEVGGFKEIVLMITGSKVYSKLKYENG 187
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GRVHTSTATV +MPE ++V++ +DP DI RS GAGGQ++NK
Sbjct: 188 AHRVQRVPETESAGRVHTSTATVGVMPEEEDVDIQLDPADIRTDVYRSSGAGGQHINKTS 247
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ ++++++ QR S VGTG
Sbjct: 248 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMKVLKARVYDYYKQKEEDQYNAQRKSAVGTG 307
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ NRVTDHR+ + +L LDG++D + + +Q + LE L ++
Sbjct: 308 DRSERIRTYNFPQNRVTDHRIGLTLNKLDKILDGDLDEIIDALIVSDQADKLEHLNDN 365
>gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
Length = 358
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DPE+V++P + +K ++ A+L + V YR +K +++ E
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E L +EL ELEE+LK LL+P DP D +++++E+RA AG
Sbjct: 61 IDEMLTETDDKEEI-EMLKEEALGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E ++K ++ ++E++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ + +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I + E++Q+QN+ +AL++L+A+LY++K++E+Q+K QR S VGTG
Sbjct: 240 SAVRITHIPTGI-IATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E++RTYNY +RVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 299 DRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKEL 353
>gi|410659534|ref|YP_006911905.1| Peptide chain release factor 1 [Dehalobacter sp. DCA]
gi|410662513|ref|YP_006914884.1| Peptide chain release factor 1 [Dehalobacter sp. CF]
gi|409021889|gb|AFV03920.1| Peptide chain release factor 1 [Dehalobacter sp. DCA]
gi|409024869|gb|AFV06899.1| Peptide chain release factor 1 [Dehalobacter sp. CF]
Length = 355
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 242/352 (68%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE K + DL+ LA PE+++N +++QK A+S + L ++V+ +R++K+ +Q+E+
Sbjct: 1 MLNRLEEIEKKYDDLTELLAKPEIIANQADFQKYARSQSALTDIVAVFREYKEINRQIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + + D EM EM +E L+ +LE LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 LKGML-DGERDPEMREMAEAEQDELTKSKKKLEGDLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY KY+E +WK +S+S + GGFK ++ I+G YS+LKYESG
Sbjct: 120 GDEAALFAGDLYKMYTKYAESQNWKTEPLSASFTDIGGFKEIIFMIEGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTST TVA++PEA+EV+V I+P DI + S G GGQ+VN +
Sbjct: 180 VHRVQRIPATESGGRIHTSTVTVAVLPEAEEVDVAINPNDIRIDIFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK +AL++LRA+L E E +I +R SQVGTG
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQHKNKDKALKVLRARLLEKAQEEAAGEIAQERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RV+DHR+ + +L S L G+I+ + + + + E L
Sbjct: 300 DRSERIRTYNYPQGRVSDHRIGLTLHKLDSILMGDIEEIITALISADHAERL 351
>gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415]
gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415]
Length = 359
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 238/357 (66%), Gaps = 1/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMQLSREEASSRETVTVYREYKQILQAISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D E+ EM E+K + EEK+K+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEELA+
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVLYDQTKKLEELAQ 359
>gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola potens JR]
gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR]
Length = 355
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 251/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+S + +++LS +ADPE++++ S++Q+ A++ A L E+VSTYR++K K ++E
Sbjct: 1 MLAKLQSLEEKYEELSKLIADPEIIADQSQWQRHAKAHAALTEIVSTYREYKSVLKGIDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L K+ D E EM+ E+ L + +L +LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKELLKDQ-LDSEFREMVEQELAELKEKEEKLSVQLKILLLPKDPNDEKNVIMEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E WK ++SS+ + GGFK ++ I+G YS+LK+ESG
Sbjct: 120 GEEAALFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLIEGQGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PEA+EV+V IDP D+ + S G GGQ+VN +
Sbjct: 180 VHRVQRVPTTESSGRIHTSTVTVAVLPEAEEVDVDIDPNDLRIDVFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK +AL++LRA+L + EQ+ ++ + R SQVGTG
Sbjct: 240 SAVRVTHIPTGIVVSCQDEKSQHKNKEKALRVLRARLLDKAQEEQRNQLASTRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + +L L+G++D +++ +Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHKLDMVLEGDLDEIIEALITTDQAEKLKEV 354
>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea blandensis MED297]
gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
Length = 361
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 243/360 (67%), Gaps = 12/360 (3%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + +++L + L+ P+V+S+ + +++ +Q AEL+ VV + ++ CE +E +R
Sbjct: 8 KLTELTERYEELGLLLSQPDVISDQTAFRQYSQEYAELENVVQCFSRYTACEADIEAARG 67
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L + D +M EM E+ S EL+E+L++LLLP DP D +N+ LEVRAG GGDE
Sbjct: 68 LLDDE--DPDMREMGKDELASAEALREELDEQLQILLLPKDPNDHKNVYLEVRAGTGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I++GDL RMY +Y+E+ W+ ++S+SE E GG+K ++ + G RVYS+LK+ESG HR
Sbjct: 126 AAIFSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRLSGERVYSQLKFESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP+TE+QGR+HTS TVA+MPEADE+E + ID D+ + T R+ GAGGQ+VNK ++A
Sbjct: 186 VQRVPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDTFRASGAGGQHVNKTDSA 245
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIK----VREQQEKIRTQRLSQVG 351
I L H PTGI + C +ER+Q +NK+RA+ LL AKL + + REQ + QR S VG
Sbjct: 246 IRLTHLPTGIVVECQDERSQHKNKARAMSLLAAKLKDAQESAAAREQAD----QRKSLVG 301
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
+G R+E+IRTYN+ RVTDHR+ + ++L + G +D+ +Q Q +L E+ +S
Sbjct: 302 SGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIGGQLDHIIQPLLQEHQAQLFAEMGQS 361
>gi|336115487|ref|YP_004570254.1| peptide chain release factor 1 [Bacillus coagulans 2-6]
gi|335368917|gb|AEH54868.1| peptide chain release factor 1 [Bacillus coagulans 2-6]
Length = 356
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 243/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DPE+V++P + ++ ++ ++L E V YR++K+ +KQL +
Sbjct: 1 MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLRD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L E D EM +M+ EI L +++ E EE+LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKSLLSEK-LDPEMKDMVKEEIHELESKIPEYEERLKILLLPKDPNDEKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I ++ GG+K +V + G YSKLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYTRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVEV I+ KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEVDINEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L LDG +D + + +Q + LE
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALILEDQSKKLE 352
>gi|374710396|ref|ZP_09714830.1| peptide chain release factor 1 [Sporolactobacillus inulinus CASD]
Length = 357
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 243/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S ++ ++ LADPEV+++P++ +K ++ ++L EVV+ YR +K +L +
Sbjct: 1 MFERLQSIEDRYEKVNQMLADPEVINDPAKLRKYSKEQSDLQEVVTEYRSYKQSAAELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E D M +M+A EI L EL L E+LK LL+P DP D RN++LE+R+ AG
Sbjct: 61 DKTMLDE-PMDASMKKMVADEINRLEMELETLREQLKQLLIPKDPNDDRNVILEIRSAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY +Y+EQ +WK +I +S E GG+K +V I G +SKLKYE+G
Sbjct: 120 GDEAALFAGDLLRMYSRYAEQQNWKTEIIDASPNEIGGYKEIVCMISGKGAFSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA +VE+ ++ KDI + S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEARDVEIELNDKDIRVDRFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI L H PTGI + C EER+Q++NK +A+++LRA++Y+ +E Q + + R VGTG
Sbjct: 240 SAIRLTHLPTGIVVSCQEERSQIKNKEKAMKVLRARVYDKYQKEAQAEYDSNRKMAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + +L L+G +D +Q+ +Q++ +E+
Sbjct: 300 DRSERIRTYNFSQNRVTDHRIGLTIHQLDQVLNGKLDEIIQALILHDQEKKIEQ 353
>gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
Il1403]
gi|385830088|ref|YP_005867901.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
CV56]
gi|418036905|ref|ZP_12675296.1| hypothetical protein LLCRE1631_00103 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|13878663|sp|Q9CHX3.1|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis
Il1403]
gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
CV56]
gi|354695050|gb|EHE94672.1| hypothetical protein LLCRE1631_00103 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374672591|dbj|BAL50482.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
IO-1]
Length = 357
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LES +++L L+DPEVVS+ + +L++ A+L + V+TY ++K + + +
Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E G D++M EM+ E+ S ++ LEE++K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ +SE WK ++ ++ GG+K V I G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ ID KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIDQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K +R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEEL 355
>gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
4028]
gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
4028]
Length = 353
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 240/354 (67%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLES A +++L +++ PE+ + Y+K+A+ AELDE+V + +K +++ E
Sbjct: 1 MVDKLESLAAKYRELEREMSTPEIFQDQERYRKIAKKHAELDEIVKAFELYKTLLREMAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ LAK++ D E+ EM +EI L + E E+ LK LL P DPLD +NI+LE+RAG G
Sbjct: 61 NQELAKDS--DPELCEMAQAEIVLLKAAIGEQEKVLKQLLTPKDPLDEKNIILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++ D+ RMY +Y+E +SW+ ++SSS+ GGFK ++ + G VYSKLKYESG
Sbjct: 119 GEEAALFVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASVSGTNVYSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAI+PEA+EV+V IDP DI + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAITVAILPEAEEVDVKIDPNDIRVDVFRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H TG+ + C +E++Q +NK++AL++LR++L + E ++ R SQVG+G
Sbjct: 239 SAIRITHLATGLVVICQDEKSQHKNKAKALKVLRSRLLQAAQDETKKAYDDNRKSQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + + L ++G+ID+ + Q E ++E
Sbjct: 299 DRSERIRTYNYPQGRVTDHRINLTLYNLDQAMEGHIDDIIDGLVQHYQAEAMKE 352
>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
gi|259585239|sp|C4Z1S4.1|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
Length = 357
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 239/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++D++ +L +P+VV++ +++KL + + L ++ TY ++K+C+K +E+
Sbjct: 1 MFDRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKNCKKNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ E DEE+ EM E+ + ELE +LK+LLLP DP D ++I++E+RAGAG
Sbjct: 61 SLAILDEE-TDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY Y++ WK ++S E GG K V +KG YS +KYESG
Sbjct: 120 GEEAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+ TSTA+VA+MPEA+EV++ ID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRIPVTESNGRIQTSTASVAVMPEAEEVDIHIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++Q+QNK +A LLRAKLY+I+ ++ + R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQKAHDAEADARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
RAEKIRTYN+ RVTDHR+ + ++L +DG+I + + +C A +Q L ++ E
Sbjct: 300 DRAEKIRTYNFPQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIAADQAAKLAKMGED 357
>gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM]
gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
4796]
gi|75432974|sp|Q5FKZ0.1|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM]
gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
4796]
Length = 361
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 253/358 (70%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K+ +K++E+
Sbjct: 4 VMAQLESLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKENKKEIED 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N D ++ EM E L E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIS-NETDSDLIEMAKEENAELEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ +W ++I S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q + +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA++
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIIDALILYNQTKQLEELADN 360
>gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
16047]
gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
16047]
Length = 362
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K +K+LE+
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELED 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + +D ++ EM E + E+ +LEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKKIISGD-SDPDLVEMAKEENSEIEKEIPKLEEQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ WK +LI S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|374376063|ref|ZP_09633721.1| bacterial peptide chain release factor 1 (bRF-1) [Niabella soli DSM
19437]
gi|373232903|gb|EHP52698.1| bacterial peptide chain release factor 1 (bRF-1) [Niabella soli DSM
19437]
Length = 354
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 233/354 (65%), Gaps = 7/354 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ + L V L +PE+V N ++ ++ L+++V Y +K L
Sbjct: 1 MLDKLEAIKARYDQLGVALTNPEIVGNNKKFAATSKEYRSLEKIVIAYNDYKGLLDDL-- 58
Query: 114 SRALAKE--NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
A KE NG+DEE+ E+ E+ L + +E ++ LL+P DP D +N+++EVRAG
Sbjct: 59 --AFNKEALNGDDEELRELAKEEVTGLEEKKEAMESHIRQLLIPKDPQDEKNVIMEVRAG 116
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA ++AGDL+RMY KY E++ +K ++S SE GG+K V +E+ G+ VY LK+E
Sbjct: 117 TGGDEASLFAGDLLRMYIKYCERHGFKTAVLSESEGTVGGYKEVQLEVTGDDVYGTLKFE 176
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SGVHRVQRVP TE QGRVHTS ATVA+MPEA+E++ + ++++ T+RSGGAGGQNVNK
Sbjct: 177 SGVHRVQRVPNTETQGRVHTSAATVAVMPEAEEIDFELKESEVKMETSRSGGAGGQNVNK 236
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
VET + L H PTG + C ERTQL N+ +A+Q++R KLYE +VR+Q+E+I R S V
Sbjct: 237 VETKVMLTHIPTGTVVICQTERTQLGNREKAMQMMRTKLYEEQVRKQEEEISRHRKSLVS 296
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELL 404
+G R+ KIRTYNY RVTDHR+ + ++ L +F++G I + E E L
Sbjct: 297 SGDRSAKIRTYNYPQGRVTDHRINLTSYNLDAFMNGEIQEFIDKLQFAENSEKL 350
>gi|389845176|ref|YP_006347256.1| peptide chain release factor 1 [Mesotoga prima MesG1.Ag.4.2]
gi|387859922|gb|AFK08013.1| peptide chain release factor 1 [Mesotoga prima MesG1.Ag.4.2]
Length = 360
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 242/354 (68%), Gaps = 10/354 (2%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE---S 114
+E + +K++ +L+ PEV S+P + + + AEL E+++ Y + + +LEE
Sbjct: 7 MEVFRERFKEVEKELSKPEVASDPDKLMEYGKKHAELSEIINLYSEIDSMKGELEEWHEM 66
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+A A+EN E+IA+ I L N + E LK LL+P D D RNI++E+RAG GG
Sbjct: 67 KATAEENEQ-----EVIANTISDLENRIARKELNLKGLLVP-DLADERNIIIEIRAGTGG 120
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
+EA ++A DL RMY +Y+E+N+WK +I S+E + GGFK V+ +I+G V+SKLKYESGV
Sbjct: 121 EEAALFAADLFRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQIRGRSVFSKLKYESGV 180
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP TE+ GR+HTSTATVA++PE E EV IDP D+ + T RS GAGGQ+VNK ++
Sbjct: 181 HRVQRVPTTESGGRIHTSTATVAVLPEVSETEVKIDPADLRIDTYRSSGAGGQHVNKTDS 240
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H+PTGI + +ER+Q QNK+RAL++LRA+LYE+ + + +I R +Q+GTG
Sbjct: 241 AVRIVHEPTGIVVAVQKERSQHQNKARALEILRARLYEMYSSKAENEITEARRTQIGTGE 300
Query: 355 RAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+ NRVTDHR+ ++ L +DG++D V +A + + LE L
Sbjct: 301 RSEKIRTYNFPQNRVTDHRINFTSYRLLYVMDGDLDELVTELSAADINKRLELL 354
>gi|344941078|ref|ZP_08780366.1| Peptide chain release factor 1 [Methylobacter tundripaludum SV96]
gi|344262270|gb|EGW22541.1| Peptide chain release factor 1 [Methylobacter tundripaludum SV96]
Length = 361
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 243/357 (68%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE+ + + +++ L++PEV N ++++ L+Q A+++ +V Y++++ Q ES A
Sbjct: 8 KLENLCERYDEIAALLSEPEVQGNQNKFRSLSQEYAQINPLVDCYKRYQ----QTLESLA 63
Query: 117 LAKE--NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
AKE N +D E+ EM E+ N+L +E +L+VLLLP DP D RNI +E+RAG GG
Sbjct: 64 SAKEMANDSDPELREMAKEEVNDAENQLEAIEHELQVLLLPKDPNDNRNIFIEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL RMYQ+Y+E+ W+ +I+ S + GG+K V++ + G VYS+LK+ESG
Sbjct: 124 DEAAIFSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRVAGKDVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+QGR+HTS TVAIMPE DEV+ + I+P D+++ T R+ GAGGQ++NK E
Sbjct: 184 HRVQRVPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDTFRASGAGGQHINKTE 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +ER+Q +N++RA+ LL ++L + + + R QVG+G
Sbjct: 244 SAIRITHVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKHHAEQSATRKLQVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY R+TDHR+ + ++L + G ++ +Q + Q ELL +L E
Sbjct: 304 DRSERIRTYNYPQGRLTDHRINLTLYKLDDIMQGGLEQVIQPLISEHQAELLTQLGE 360
>gi|119361535|sp|Q24ML9.2|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 355
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 241/349 (69%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + + +L+ L+DPEV+ N SE+QK A++ A + ++V +R++ + K LEE++
Sbjct: 4 KLIEIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQG 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E D E EM E++ L+ + ELEEK+++LLLP DP D +N+++E+RAGAGG+E
Sbjct: 64 LLEEK-LDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL RMY KY+EQ W+ L+S+S + GGFK ++ I+G YSKLK+ESGVHR
Sbjct: 123 AALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+ GR+HTST TVA++PEA+EV+V I+P D+ + S G GGQ+VN ++A+
Sbjct: 183 VQRVPTTESGGRIHTSTTTVAVLPEAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG + C +E++QL+NK +AL++LRA+L E E ++ ++R SQVGTG R+
Sbjct: 243 RITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGTGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ RVTDHR+ + L S L G +D + + +Q E L
Sbjct: 303 ERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERL 351
>gi|415883777|ref|ZP_11545806.1| peptide chain release factor 1 [Bacillus methanolicus MGA3]
gi|387591572|gb|EIJ83889.1| peptide chain release factor 1 [Bacillus methanolicus MGA3]
Length = 357
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 243/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DPE+V++P + ++ ++ +++ E V TYR++K+ +KQ ++
Sbjct: 1 MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDIQETVQTYREYKEVKKQYQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM EM+ EI L + +LEE+LK+LLLP DP D +N++ E+R AG
Sbjct: 61 AKAMLEEK-LDPEMREMVKEEIDELEERIEDLEERLKILLLPKDPNDDKNVIFEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S GG+K ++ I G YS+LK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEMKGWKTEVIEASPTGLGGYKEIIFMITGKGAYSRLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVEIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ +E Q + QR S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKYRQEAQAEYDQQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ NRVTDHR+ + + L L+G +D + + +Q + LE E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDELIDALILDDQSKKLESAGE 356
>gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418575559|ref|ZP_13139709.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|119361617|sp|Q49Z65.1|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379325961|gb|EHY93089.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 358
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 253/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV+NP +K ++ AEL + V YR +K ++ + E
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ ++ +++E+ EM+ E ++L N++ +LEE+LK LL+P DP D +++++E+RA AG
Sbjct: 61 VEEMLRDTKDNDEI-EMLKEEHQTLQNKVPKLEEELKFLLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY KY+E ++K ++ +E++ GG+K + + GN +SKLKYE+G
Sbjct: 120 GDEAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ + +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +AL++L+A+L+++K++E+Q+K QR S VGTG
Sbjct: 240 SAVRITHIPTGV-IATSSEKSQIQNREKALKVLKARLFDMKLQEEQQKYAAQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G +D + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLAEQTDKLKEL 353
>gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18]
gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18]
Length = 359
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 249/348 (71%), Gaps = 3/348 (0%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGND 124
+++L L+DPEV++N E++KL++ + L E+++ YR++K + ++R L KE D
Sbjct: 14 FEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIGDNRELLKEP--D 71
Query: 125 EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
+EM EM +E++SL +LE ++KVLLLP DP D +N++LE+RAG GGDE+ ++AGDL
Sbjct: 72 QEMREMAQAELESLEERREQLESEIKVLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDL 131
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
RMY +++E N W+ +IS+SE+EKGGFK V+ ++G V++KLKYESG HRVQRVP+TE
Sbjct: 132 FRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESGTHRVQRVPETE 191
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
AQGR+HTS TVA+MPEA++V++ I+P D+++ RS GAGGQ+VN ++A+ + H PTG
Sbjct: 192 AQGRIHTSACTVAVMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHIPTG 251
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
+ C EER+Q++N+++A+++L++++ + + EQ K+ R SQVG+G R+E+IRTYN+
Sbjct: 252 TVVACQEERSQIKNRAKAMKVLKSRILDNILMEQNAKLAADRKSQVGSGDRSERIRTYNF 311
Query: 365 KDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+TDHR+ + + L + + G+I S A Q E L+ +E +
Sbjct: 312 PQGRMTDHRIGLTLYRLDAIMAGDIGEIADSLRAHYQMEALQAQSEGM 359
>gi|440780061|ref|ZP_20958649.1| peptide chain release factor 1 [Clostridium pasteurianum DSM 525]
gi|440221737|gb|ELP60941.1| peptide chain release factor 1 [Clostridium pasteurianum DSM 525]
Length = 359
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 246/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L +++LS+K++DP V++N E+QKL + AE++ +V+ YR++K ++ +++
Sbjct: 1 MLERLNFIENKYEELSIKISDPTVMANQKEWQKLCKEHAEMETIVTKYRQYKSAQETIKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E D E+ EM+ E+K L L + EE+LK+LLLP DP D +N+ +E+R GAG
Sbjct: 61 DQEMLSEK-IDRELKEMVEEEVKELQGNLTKYEEELKILLLPKDPNDNKNVFVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ W ++S++E + GGFK VV IKG YS+LK+ESG
Sbjct: 120 GEEAALFAANLFRMYTRYAERKGWNVEIMSANETDIGGFKEVVFMIKGEGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTST+TVA++PE ++V+V I+P D+ + R+ G GGQ VN +
Sbjct: 180 AHRVQRVPDTESSGRIHTSTSTVAVLPEVEDVDVEINPNDLRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++LRA+LYE E+ I R SQVGTG
Sbjct: 240 SAVRITHLPTGMVVSCQDEKSQLKNKEKAMKVLRARLYEKAQEERNAGIAEDRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ M ++L SFLDG ID + + EQ E ++ +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGMTLYKLDSFLDGEIDEIIDALITEEQAEKMKAIG 355
>gi|414161681|ref|ZP_11417935.1| peptide chain release factor 1 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410875393|gb|EKS23313.1| peptide chain release factor 1 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 358
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VVS+ + ++ ++ ++L + V YR++K ++ +EE
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVSDSDKLREYSKEQSDLQKTVDVYREYKQNKEDIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ +M+ S+I L N L +LEE+LK+LL+P DP D +N+++E+RA AG
Sbjct: 61 MNEMLNETTDKEEV-DMLKSDISELKNTLPDLEEQLKLLLIPKDPNDDKNVVVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +YSE +K +I ++++ GGFK + I G YSKLKYE+G
Sbjct: 120 GDEAAIFAGDLYRMYSRYSEALGYKTEVIEMNDSDHGGFKEISFIINGQGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VE+ I +D+++ T RS G+GGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIETYRSSGSGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I + E++Q+QN+ +AL++L+A++Y++K++E+Q K ++R S VGTG
Sbjct: 240 SAVRITHLPTGI-IATSSEKSQIQNREKALKVLKARVYDMKLQEEQAKYASERKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIIEGKLDEIIDALTMSEQTEKLKEL 353
>gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687641|sp|B0K7G6.1|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 356
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 253/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + DLS K++DP ++SN +E++K + A ++++V YR++K + +E
Sbjct: 1 MIDKLQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + NDEE+ EM E+ L + +L E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI++ RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKIDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q+QN+ RAL++LRAKLYE+ ++EQQ +I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNM 353
>gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21]
gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21]
Length = 357
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ W+++ +L++P+ V++ + KL + +L ++V Y +K+ +E
Sbjct: 1 MLEKLEAIKLRWEEVERELSNPDTVNDMKRFAKLNKEYKDLGKIVDEYYIYKNIISNIET 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N D+E+ EM ++ +L + E EEK++++++P DP DA+N + E+R G G
Sbjct: 61 NKDILA-NEKDQELREMAKEDLDALLVQKEEKEEKVRLMMIPKDPEDAKNAIFEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y +Q W+ ++ +E GG+K V++++ G VY +LKYESG
Sbjct: 120 GDEAALFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILKVSGEDVYGQLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTS A+VA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+GI + C ER+QL N+ A+++LR KLYE++V+++ I +R + V TG
Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQKKHGDIAAKRKTMVSTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+ KIRTYNY RVT+HR+ + + L + +DG+I + + E E ++E
Sbjct: 300 DRSAKIRTYNYPQGRVTEHRIGLTMYNLPAIMDGDIQEIIDALQFAENAEKMKE 353
>gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51]
gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 360
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 241/349 (69%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + + +L+ L+DPEV+ N SE+QK A++ A + ++V +R++ + K LEE++
Sbjct: 9 KLIEIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQG 68
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E D E EM E++ L+ + ELEEK+++LLLP DP D +N+++E+RAGAGG+E
Sbjct: 69 LLEEK-LDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEE 127
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL RMY KY+EQ W+ L+S+S + GGFK ++ I+G YSKLK+ESGVHR
Sbjct: 128 AALFAGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHR 187
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+ GR+HTST TVA++PEA+EV+V I+P D+ + S G GGQ+VN ++A+
Sbjct: 188 VQRVPTTESGGRIHTSTTTVAVLPEAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAV 247
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG + C +E++QL+NK +AL++LRA+L E E ++ ++R SQVGTG R+
Sbjct: 248 RITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGTGDRS 307
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ RVTDHR+ + L S L G +D + + +Q E L
Sbjct: 308 ERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERL 356
>gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
SK11]
gi|385838982|ref|YP_005876612.1| Peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
A76]
gi|414073827|ref|YP_006999044.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
UC509.9]
gi|123125765|sp|Q031E4.1|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus
lactis subsp. cremoris SK11]
gi|358750210|gb|AEU41189.1| Peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
A76]
gi|413973747|gb|AFW91211.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 357
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LES +++L L+DPEVVS+ + +L++ A+L + V+TY ++K + + +
Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E G D+EM EM+ E+ S ++ LEE++K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ +SE WK ++ ++ GG+K V I G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ I+ KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIEQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K +R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEEL 355
>gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 356
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 247/351 (70%), Gaps = 2/351 (0%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
L+ + + +L KL D V+++ YQK+A AE++ VV YR++K LE+++ +
Sbjct: 5 LQVFDEKYIELEQKLMDINVINDSKLYQKIAIEHAEIEPVVLKYREYKTLISNLEDNKEM 64
Query: 118 AKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEA 177
EN +D+ M ++I +IK ++ LE+++K+LL+P DP D++N+++E+RAGAGGDEA
Sbjct: 65 LNENLDDD-MRDLIKEDIKDSEEKISVLEDEIKILLIPKDPNDSKNVIVEIRAGAGGDEA 123
Query: 178 GIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRV 237
++AG L R Y +++E+ WK ++S++E GG+K V+ I G YS+LKYESGVHRV
Sbjct: 124 ALFAGVLFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMILGRGAYSRLKYESGVHRV 183
Query: 238 QRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAID 297
QRVP+TE+ GR+HTSTATVA++PEA++VE+ I+P DI+ R+ G GGQ VN ++A+
Sbjct: 184 QRVPETESSGRIHTSTATVAVLPEAEDVEIDIEPSDIKFDVFRASGNGGQCVNTTDSAVR 243
Query: 298 LFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAE 357
L H PTGI I C +E++QL+NK +A+++L+ KLY++K++EQ ++ Q+ SQ+GTG R+E
Sbjct: 244 LTHIPTGIVISCQDEKSQLRNKEKAMKILKTKLYDLKLQEQNAELSMQKKSQIGTGDRSE 303
Query: 358 KIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+IRTYNY RVTDHR+ + ++ S +DG++D + + A +Q +E +
Sbjct: 304 RIRTYNYPQGRVTDHRIGLTLHKIDSIVDGDLDEIIDALIASDQASKIENV 354
>gi|325291372|ref|YP_004267553.1| peptide chain release factor 1 (bRF-1) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
glycolicus DSM 8271]
Length = 356
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE K + +++ L++PE+ S+ + YQK A++ A + E+V +R++K+ +QL++
Sbjct: 1 MFARLEEIEKKYDEITELLSNPEIFSDQAAYQKNAKAQAAIAEIVEGFREYKEIFRQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL +E D EM E SEI L N E EEKLK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AQALLEEE-LDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL +MY +Y+E+ WK ++S+S + GGFK ++ ++G YS LKYESG
Sbjct: 120 GEEAALFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAYSMLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA++V++ I+P +I + S G GGQ+VN +
Sbjct: 180 VHRVQRIPSTESGGRIHTSTATVAVLPEAEDVDIEINPNEIRIDIFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK +AL++LRA+L E +E +I +R SQVGTG
Sbjct: 240 SAVRVTHIPTGIVVSCQDEKSQHKNKDKALKVLRARLLEKAQQEAMGEIAQERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ RV+DHR+ + +L + L G+I + + A +Q+E L
Sbjct: 300 DRSERIRTYNFPQGRVSDHRIGLTLHKLENILLGDIQEIIDALIAKDQEERL 351
>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
Length = 363
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
I K+E+ + ++++S L EV+SN SE+ KL++ AEL ++V+ ++++++ Q E
Sbjct: 7 FIDKMEALERRYQEVSDLLGQNEVISNRSEFTKLSREHAELAKLVAAWQEYRELRTQESE 66
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+RA+ +D EM E+ E+++L L E+ +K+LLLP DP D +NI+LE+RAG G
Sbjct: 67 ARAMVASE-SDAEMRELAREELRALQESLEVKEQHIKILLLPKDPNDGKNILLELRAGTG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK ++S S+ GG K V+ I G VYS LKYESG
Sbjct: 126 GDEAALFAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTS ATV +MPEA+EV++ ++ KD+ + RS G GGQ+VN +
Sbjct: 186 VHRVQRVPATESQGRVHTSAATVVVMPEAEEVDIKLEEKDLRIDVYRSSGPGGQSVNTTD 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK++A+++LR+++ ++++ +Q+ + R QR S V +G
Sbjct: 246 SAVRVTHLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+EKIRTYN+ +R+TDHR+ + L+S LDG++ + V + A Q E L++ A
Sbjct: 306 DRSEKIRTYNFPQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRAHYQTEALKQQA 361
>gi|402814115|ref|ZP_10863709.1| peptide chain release factor 1 [Paenibacillus alvei DSM 29]
gi|402507962|gb|EJW18483.1| peptide chain release factor 1 [Paenibacillus alvei DSM 29]
Length = 358
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 244/353 (69%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S A ++ LS L DP+V ++P + ++ ++ ++L + ++K+ +L+
Sbjct: 2 MLDRLQSLADRYEKLSELLCDPDVANDPKKLREYSKEQSDLQPAYEAFMEYKNVLSELDA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E +DE M EM+ EI+ LS ELEE++++LLLP DP D +N+++E+R AG
Sbjct: 62 AKTMMQEKLDDE-MREMVKMEIEELSARQTELEERIRILLLPKDPNDDKNVIVEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y++ W+ L+ ++ ++ GGFK V+ + G YSKLKYESG
Sbjct: 121 GDEAALFASDLYRMYTRYADSQGWRTELMEANISDLGGFKEVIFSVSGKGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTST+TVA+MPE DEVEV I KDI + T S GAGGQ+VN +
Sbjct: 181 AHRVQRIPATESGGRIHTSTSTVAVMPEVDEVEVEIFDKDIRVDTFCSSGAGGQSVNTTK 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C + ++Q NK++ALQ+LRA++YEIK +E++ K +R S+VGTG
Sbjct: 241 SAVRVTHIPTGIMATCQDGKSQNDNKAKALQVLRARIYEIKRQEEEAKYAGERKSKVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYNY +RVTDHR+ + +L ++G+++ +Q+ EQ ELLE
Sbjct: 301 DRSERIRTYNYPQSRVTDHRIGLTLHKLDQIMNGDVEELIQALTLTEQAELLE 353
>gi|429741202|ref|ZP_19274866.1| peptide chain release factor 1 [Porphyromonas catoniae F0037]
gi|429159437|gb|EKY01951.1| peptide chain release factor 1 [Porphyromonas catoniae F0037]
Length = 362
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 240/356 (67%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L++++ES +++++ + P+V+++ + KL++ +L+ ++ +++++ ++E
Sbjct: 7 LLSRIESLEVRFQEITTLITAPDVIADQRRFMKLSKEYRDLERILDKGKEYRNLLGNIQE 66
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D E+ M ++ + + LEE++K+LL+P+DP DA+N+++E+R G G
Sbjct: 67 GKD-TLETESDPELRTMAREMVQEAEDRIPSLEEEIKLLLIPADPEDAKNVVMEIRGGTG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y E W + + SE GG+K +V + G+ VY LKYESG
Sbjct: 126 GDEAALFAGDLYRMYVRYCEGRGWTTEVTNVSEGTAGGYKEIVFTVSGDGVYGVLKYESG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE QGRVHTS A+VA++PEA+EV+VV++P DIE+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPETETQGRVHTSAASVAVLPEAEEVDVVLNPADIEMQTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKPTGI + C + RTQL N+ A+Q+LR KLY+I++ + E+I +R + V TG
Sbjct: 246 TKVQLTHKPTGIVVVCQQARTQLANRELAMQMLRTKLYDIELTKHNEEIAARRKTMVSTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+ KIRTYNY RVTDHR+ + + L++ + G I + E E ++E A
Sbjct: 306 DRSAKIRTYNYPQGRVTDHRINLTLYNLSAIMSGEIQPIIDELIIAENIERMKEAA 361
>gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
45221]
gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
45221]
Length = 362
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 234/341 (68%)
Query: 67 DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEE 126
DL ++ADP S+ ++++ + ++ + F + Q+ E+ A+ ++ +EE
Sbjct: 16 DLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQTQIVENEAMMADSSVEEE 75
Query: 127 MAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVR 186
+ EM A E++ L ++ LE+ + ++P D D+RN ++E+R GAGGDEA I+AGDL R
Sbjct: 76 LREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIRGGAGGDEANIFAGDLYR 135
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQ 246
MY +Y+E W+ ++S+S AE GG++ ++ I G Y LK+ESGVHRVQRVP TE Q
Sbjct: 136 MYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLKFESGVHRVQRVPVTETQ 195
Query: 247 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 306
GR+HTSTATVA++PEA+EV++ I+P+D+E++T R+ GAGGQ+VN ++A+ + HKPTG+
Sbjct: 196 GRIHTSTATVAVLPEAEEVDIEINPQDLEISTMRASGAGGQHVNTTDSAVMMVHKPTGVT 255
Query: 307 IFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKD 366
++C +ER+Q++N+++AL ++R++L + KV E+ K +R Q+GTG R+E+IRTYNY
Sbjct: 256 VYCADERSQIKNRAKALTVMRSRLLQAKVDEENAKYAAERKGQIGTGDRSERIRTYNYPQ 315
Query: 367 NRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+TDHR+ MN L S +DG +D+ + + ++ + +E L
Sbjct: 316 GRLTDHRIGMNLSLPSVIDGALDDLIDALHNVDYEARIENL 356
>gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033087|ref|YP_004890078.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|418275886|ref|ZP_12891209.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448821870|ref|YP_007415032.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
gi|32171522|sp|Q88UT2.1|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342242330|emb|CCC79564.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|376009437|gb|EHS82766.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448275367|gb|AGE39886.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
Length = 360
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 236/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
KL++ A +++L L+DPEV+S+ + KL++ M + E V Y +K+ Q+EE
Sbjct: 4 FFDKLQAVADRYEELGELLSDPEVISDSQRFMKLSKEMGNIRETVEKYNHYKEVTSQIEE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L E +DE M M+ ++K+L+ E +LE ++ +L+LP DP D +NI++E+ AG
Sbjct: 64 NDELLHEKLDDE-MNAMVKDDLKNLNAEKDQLEHEITLLMLPKDPNDDKNIIMEIHGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W+ + +E E GGFK +V+ I G++VYSKLKYESG
Sbjct: 123 GDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDKVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA +V++ ID KDI RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEAQDVDIDIDQKDIRTDVFRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++LRA++Y+ +Q + +R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDYYQSREQNEYDAERKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + +L ++G +D + + +Q E +E L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELDEVIDALVLADQAEKMERL 357
>gi|420154949|ref|ZP_14661821.1| peptide chain release factor 1 [Clostridium sp. MSTE9]
gi|394759930|gb|EJF42579.1| peptide chain release factor 1 [Clostridium sp. MSTE9]
Length = 360
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 234/342 (68%), Gaps = 1/342 (0%)
Query: 66 KDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDE 125
++L+ ++ DP V ++ Y +L + L+ +V YR++ + +E+S + E+G +
Sbjct: 13 EELNQRMFDPVVAADAKGYAELMKEYKNLEPIVEKYREYLKAVQTVEDSTEMLGESGLER 72
Query: 126 EMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLV 185
EM EMI E+ +++ E+LK+LLLP DP D RN+++E+R GAGG+EA +++ L
Sbjct: 73 EMKEMIQQELDDAKDQVERTAEELKILLLPRDPNDERNVIMEIRGGAGGEEAALFSARLF 132
Query: 186 RMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEA 245
RMY Y+ + WK L++ +E E GG+K + +I G+ YS+LKYESGVHRVQRVP+TE
Sbjct: 133 RMYSMYATRRGWKTELLNVNETELGGYKEISFQITGDGAYSRLKYESGVHRVQRVPETET 192
Query: 246 QGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 305
QGR+HTSTATVA++PE D+VE+ I+P D+++ T R+ GAGGQ+VNK E+AI + H PTG
Sbjct: 193 QGRIHTSTATVAVLPEVDDVEIEINPTDLQIDTYRASGAGGQHVNKTESAIRITHLPTGT 252
Query: 306 RIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYK 365
+ C +ER+Q +NK +A+++LR++LYE K REQ ++ QR SQVGTG R+E+IRTYN+
Sbjct: 253 VVECQDERSQFKNKDKAMKVLRSRLYEAKQREQDAQVAQQRKSQVGTGDRSERIRTYNFP 312
Query: 366 DNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+TDHR+ + + L L G++D + + ++ LEE
Sbjct: 313 QGRLTDHRIGLTIYRLEEMLSGDLDEVIDALITADRARQLEE 354
>gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
33277]
gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
33277]
Length = 352
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 241/347 (69%), Gaps = 6/347 (1%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR-ALAKENGN 123
++++S + DP V+++ + KL++ +L+++ + R +++ +EE++ +AKE+
Sbjct: 8 FEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHTMAKES-- 65
Query: 124 DEEMAEMIASEIKSLSNE-LIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAG 182
DEE+ EM A E+ + +NE L LEE++K+LL+P++P D +N ++E+R G GGDEA ++AG
Sbjct: 66 DEELREM-AREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEAALFAG 124
Query: 183 DLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQ 242
DL RMY KY E W+ + SE GG+K +V +KG VY LKYESGVHRVQRVP
Sbjct: 125 DLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRVQRVPA 184
Query: 243 TEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKP 302
TE QGR+HTS ATVA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVET + L HKP
Sbjct: 185 TETQGRIHTSAATVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQLTHKP 244
Query: 303 TGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTY 362
TG+ + C + R+Q+ N+ A+Q+LR+KLY+I++ + E I +R + V TG R+ KIRTY
Sbjct: 245 TGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEAIAARRKTMVSTGDRSAKIRTY 304
Query: 363 NYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
NY RVTDHR+ M + L++ +DG + + + E E ++E A
Sbjct: 305 NYPQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAENVERMKEAA 351
>gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
Length = 362
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ A +++L L+DP+V+++ + +L++ MA+L E V Y K+K +Q+++
Sbjct: 6 LFDRLQMLADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVVQQIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ G D+EMA M+ E+ NE +LE+++K+LLLP DP D +++++E+R AG
Sbjct: 66 DEEMLS-TGLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I G V+SKLKYESG
Sbjct: 125 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKLKYESG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVVVMPEEEDVEIDLDPKDIRVDVYRSSGAGGQHINKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ ++Q + R S VGTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYKSQEQSEYDENRKSAVGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +D+ + + +Q + LEEL
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQTKALEEL 359
>gi|450105244|ref|ZP_21859756.1| peptide chain release factor 1 [Streptococcus mutans SF14]
gi|450122405|ref|ZP_21866746.1| peptide chain release factor 1 [Streptococcus mutans ST6]
gi|449224845|gb|EMC24469.1| peptide chain release factor 1 [Streptococcus mutans SF14]
gi|449227982|gb|EMC27372.1| peptide chain release factor 1 [Streptococcus mutans ST6]
Length = 359
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVSN + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSNTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
gi|226739102|sp|B5YDB2.1|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
Length = 367
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 252/368 (68%), Gaps = 2/368 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + ++ KLE K +K++ L E++S+ S YQ L + A+++E+V + ++K
Sbjct: 1 MLQKLVLDKLEEIEKRFKEIENLLTKEEIISDLSRYQSLLKERAKIEEIVEKFSEYKKLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E+ + KE DE++ + +E++ + +L ++E LK LLLP DP D +NI++E+
Sbjct: 61 KEREDLEVMTKEE-QDEDLRSLAEAELEEIEKKLEKIEFDLKALLLPKDPNDEKNIIMEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA ++A DL RMY Y+++ WK ++SS+ GG+K ++ ++G YS+L
Sbjct: 120 RAGTGGEEAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIVEGKGAYSRL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE+ GR+HTSTATVA++PE +EV+V IDPKD+ + T RSGGAGGQ+
Sbjct: 180 KFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEVDVEIDPKDLRIETFRSGGAGGQH 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNK E+ + + H P+GI + C +ER+Q QN+ +A+++LRA+LYE RE++ +I +QR
Sbjct: 240 VNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQ 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG R+EKIRTYN+ RVTDHR+ +F+L L G +D + E++E +++L
Sbjct: 300 QVGTGERSEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEKEEQIKKL 359
Query: 408 AESVGAPS 415
E VGA S
Sbjct: 360 FEEVGATS 367
>gi|373465770|ref|ZP_09557214.1| peptide chain release factor 1 [Lactobacillus kisonensis F0435]
gi|371759372|gb|EHO48110.1| peptide chain release factor 1 [Lactobacillus kisonensis F0435]
Length = 361
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 244/355 (68%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + +L+ ++DPEV+++ ++ KL++ A+L + V+ ++K++ QL +
Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVTGQLND 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +E +D ++ M+ EI +++ +LE++LKV+LLP DP D +NI++E+ AG
Sbjct: 64 DKEMLREKIDDPDLETMVKDEISDYTDQKEKLEDELKVMLLPKDPNDDKNIIMEIHGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W+ ++ +E E GGFK + + I G++VYSKLKYE+G
Sbjct: 124 GDEASLFAADLFSMYSKYAERQGWQVEVVDKNETEVGGFKEIALMITGDKVYSKLKYENG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMPEEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q++ +R S VGTG
Sbjct: 244 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYSQQEQDQYNAERKSAVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G + + + +Q + LE L
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEIIDALILSDQAKKLENL 358
>gi|347525808|ref|YP_004832556.1| peptide chain release factor 1 [Lactobacillus ruminis ATCC 27782]
gi|417974453|ref|ZP_12615272.1| peptide chain release factor 1 [Lactobacillus ruminis ATCC 25644]
gi|345284767|gb|AEN78620.1| peptide chain release factor 1 [Lactobacillus ruminis ATCC 27782]
gi|346329183|gb|EGX97483.1| peptide chain release factor 1 [Lactobacillus ruminis ATCC 25644]
Length = 360
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ A +++L L+DP+V+++ + +L++ MA+L E V Y K+K +Q+++
Sbjct: 4 LFDRLQMLADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVVQQIKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ G D+EMA M+ E+ NE +LE+++K+LLLP DP D +++++E+R AG
Sbjct: 64 DEEMLS-TGLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ W +I + E GGFK + + I G V+SKLKYESG
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVVVMPEEEDVEIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ ++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYKSQEQSEYDENRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +D+ + + +Q + LEEL
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQTKALEEL 357
>gi|390959910|ref|YP_006423667.1| peptide chain release factor 1 (bRF-1) [Terriglobus roseus DSM
18391]
gi|390414828|gb|AFL90332.1| bacterial peptide chain release factor 1 (bRF-1) [Terriglobus
roseus DSM 18391]
Length = 357
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 158/361 (43%), Positives = 246/361 (68%), Gaps = 5/361 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE +K+L V+L+DP +VS+ YQK+ + +++ V+ +R++K + +
Sbjct: 1 MFDRLEQLEDRYKELEVELSDPALVSDQQRYQKITKQHRDMEPVIERFREYKRVAAGIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ DE+M M E+ L L+E+EE+LK++LLP DP D +N++LE+RA G
Sbjct: 61 AKAMMSED--DEDMRSMAQEELSGLEPRLLEVEEQLKIMLLPKDPNDDKNVVLEIRAATG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AG++ RMY +Y+EQ+ WK ++S +E+ GG K V I+G+RVYS LKYESG
Sbjct: 119 GDEASLFAGEVFRMYLRYAEQHRWKVQILSETESTVGGMKDVTALIEGDRVYSSLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTS TVA++PEA+EV+V I+ KD+ + T S G GGQ+VN
Sbjct: 179 VHRVQRVPATETQGRVHTSAITVAVLPEAEEVDVKIEQKDLRIDTFCSSGPGGQSVNTTY 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PT + C +E++Q++N+ +A+++LR++LYE+++ +Q + T R SQVGTG
Sbjct: 239 SAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMEKQHQLQATARKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R+EKIRTYN+ NR TDHR+ + +L ++G + + + A + E L+ AE+V
Sbjct: 299 DRSEKIRTYNFPQNRFTDHRIGLTLHQLEYVMEGKLQPVIDALIAHDTNERLK--AEAVA 356
Query: 413 A 413
A
Sbjct: 357 A 357
>gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
KF147]
gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
lactis KF147]
Length = 357
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LES +++L L+DPEVVS+ + +L++ A+L + V+TY +K + + +
Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E G D++M EM+ E+ S ++ LEE++K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ +SE WK ++ ++ GG+K V I G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ ID KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMTIDQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K +R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQTKKLEEL 355
>gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 356
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++++ +L +P+V ++ + ++KL + A+L +V Y ++K ++ + +
Sbjct: 1 MFDRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E +DEEM E+ E+ + + ELE +LK+LLLP DP D +NIM+E+RAGAG
Sbjct: 61 SEEML-EMESDEEMRELAKEELSASKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A ++ RMY Y+E WK LIS +E GGFK VV + G VYS++KYESG
Sbjct: 120 GDESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDDKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVT+HR+K+ +++ + ++G++D + A +Q L + E
Sbjct: 300 DRSEKIRTYNFPQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIAADQAAKLANMNE 356
>gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 360
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 240/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + K L +ADPEV+ + S+ Q +A+ EL E+++ Y ++K +Q+EE
Sbjct: 5 FLVQLEGIEEKLKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVNRQIEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +D+ + +LE+K+++ LLP DP D RN++LE+R GAG
Sbjct: 65 VKQLLNSTPDDDLRELAEEELESLKKHRE-DLEKKIEIALLPKDPNDERNVILEIRQGAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMYQ+Y+E++ WK ++S EKGG K V+ IKG YS+LKYESG
Sbjct: 124 GDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA++PEA+EV++ I P+++ + T R+GGAGGQ+VN +
Sbjct: 184 VHRVQRVPETESSGRIHTSTVTVAVLPEAEEVDIEIKPEELRIETMRAGGAGGQHVNTTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+QLQNK +A+Q+LRA+L + R ++EKI +R QVGTG
Sbjct: 244 SAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERLEKEKIAKERKEQVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+ NRVTDHR+ ++ + +DG++D + A E +E L +L
Sbjct: 304 ERSEKIRTYNFPQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKENEEKLAKL 358
>gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
prausnitzii L2-6]
Length = 361
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 236/358 (65%), Gaps = 2/358 (0%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P L +++E+ + +++LS++L PE ++P++ ++L Q E VV Y + L
Sbjct: 2 PNLTSQMEAVCRRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHL 61
Query: 112 EESRALAK-ENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
+++AL + + D + M+ E+ S ++ ELE LK+LLLP D D +++++E+RA
Sbjct: 62 AQAKALLEGDEPLDADFKAMVQQELSEKSQDVAELENNLKILLLPKDANDEKSVIMEIRA 121
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGG+EA ++A LVRMY Y + W+ L++ +E E GG K V + G Y++LKY
Sbjct: 122 GAGGEEAALFAHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKY 181
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP+TE QGR+HTSTATVA+MP+A+EV+ +D KD+ + T RS GAGGQ++N
Sbjct: 182 ESGVHRVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHIN 241
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K +AI + H PTG + C ER+Q QNK +AL++LR++L K +EQQ+ I R QV
Sbjct: 242 KTSSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRLLAQKQKEQQDAINADRAGQV 301
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
GTG R+EKIRTYN+ +R TDHR+ + L +DG++D+ + + A EQ E L++L
Sbjct: 302 GTGDRSEKIRTYNFPQDRCTDHRIGLTVHNLDKIMDGDLDDIIDALATREQAERLQKL 359
>gi|328952115|ref|YP_004369449.1| peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
Length = 357
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 244/356 (68%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L + + +L +L++PE + N YQ+ A+ AEL ++ +R+ + E++ +
Sbjct: 2 LIERLHAIENRYLELEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECDN 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K DEE+ E+ EI+ L L LE +L+ LLLP DP DA+NI+LE+RAG G
Sbjct: 62 NQALLKTE-TDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +++EQ+ WK ++S + GG K ++ I G +VYS LKYESG
Sbjct: 121 GEEAALFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGR+HTS TVAI+PEA++V+V I P+++ + RS G GGQ+VN +
Sbjct: 181 VHRVQRVPTTESQGRIHTSAVTVAILPEAEDVDVQISPEELRIDVFRSSGPGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +NK++AL++L+A+L +IK +EQ +K+ R SQVG+G
Sbjct: 241 SAVRITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDIKQQEQHQKMAQDRKSQVGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHRL + + L +FL+G +D + + + + E L++ A
Sbjct: 301 DRSERIRTYNFPQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVSYYRTEALKQQA 356
>gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 356
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 238/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE + + ++ +ADP V ++ + +LA+ A ++ ++ YR++K E+ L E
Sbjct: 1 MLDKLEIIERRYLEIEQAIADPSVATDITLLTRLAKERASMEALIGMYRRYKRNEQSLTE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E DEEM E+ E+K L E EL E+LK+ LLP DP RNI++E+RAG G
Sbjct: 61 AEQML-ETETDEEMRELAKEEVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +E G FK V EI G VYS+LKYESG
Sbjct: 120 GDEAKLFAGDLFRMYTRYAELKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA+MP A+++EV I P+D+ + SGGAGGQNVNKV
Sbjct: 180 VHRVQRVPVTEASGRIHTSTATVAVMPVAEDIEVDIKPEDLRIDIYHSGGAGGQNVNKVA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H P+G+ + C EER+QL+N+ +A+ +L+A+L ++ +Q +++ R +QVG+
Sbjct: 240 TAVRMTHLPSGLVVACQEERSQLKNRQKAMSVLKARLLAMEQEKQDKEMTDNRRAQVGSA 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+EKIRTYNY +R+TDHR+ ++ L ++G +D+ + + A EQ LL+
Sbjct: 300 DRSEKIRTYNYPQDRLTDHRIGLSVHNLPKIMEGYLDDIIDALATDEQACLLQ 352
>gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
Length = 360
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 239/360 (66%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P +ITKL + ++ ++ ++ + N Y+KL + AE+ +V YR F+ E +
Sbjct: 3 PSMITKLANLSERLDEIDRLMSSEGITDNMDNYRKLTREHAEITPIVEQYRAFEQTEADI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E++ + ND EM EI++ +L +E L+ LLLP DP D +NI LE+RAG
Sbjct: 63 NEAQTML----NDPEMKAFAQEEIEAGKAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+G++AGDL RMY +Y+E+ WK ++S++E E GG+K ++ +I+G YSKLK+E
Sbjct: 119 TGGDESGLFAGDLYRMYSRYAERQGWKVEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE QGR+HTS TVAI+PEADEV +VVI+P D+ + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPDTETQGRIHTSACTVAILPEADEVSDVVINPADVRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ L H PTGI + C E R+Q NK++A +L A++ +V EQQ KI ++R S +
Sbjct: 239 KTDSAVRLTHAPTGIVVECQEGRSQHANKAQAFAVLAARIKAKQVDEQQSKIASERKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY R+TDHR+ + +++ + +G++D + + AA Q +LL L E
Sbjct: 299 GSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELIGALAAEHQADLLASLGE 358
>gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
Length = 362
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 250/358 (69%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE ++++ +ADPEV+++ Y ++++ A++ EVV YRK+++ +K + +
Sbjct: 4 VMAQLEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + EN +DE++ EM E L E+ ELEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEII-ENESDEDLVEMAKEENSDLEKEVAELEEEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E WK ++I E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+++A+++L++++Y+ + Q +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQASYDEKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELAE
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIISALIVHYQTKQLEELAED 360
>gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
gi|238687578|sp|B0K1F7.1|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
Length = 356
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 253/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP ++SN +E++K + A ++++V YR++K + +E
Sbjct: 1 MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + NDEE+ EM E+ L + +L E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI++ RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q+QN+ RAL++LRAKLYE+ ++EQQ +I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNYPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNM 353
>gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
Length = 355
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 239/352 (67%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + L +LA P + ++ Y+K++++ ++L +VV YR++K C K L E
Sbjct: 1 MFGKLEDIEIKYDKLEYELAQPGIFNDQERYKKVSKAHSDLSDVVVLYREYKKCSKDLAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R ++ + D E+ EM +EI L + + LEEK+K+LLLPSDP+D +NI+LE+RAG G
Sbjct: 61 NREMSHDP--DPEIREMAKAEISELEDRIETLEEKIKILLLPSDPMDEKNIILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL RMY +Y+E N WK +SS+ GG K V+ I G++VYSKLKYESG
Sbjct: 119 GDEAGLFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLKEVIASIAGDKVYSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV++ + P+D+ + RS G GGQ+VN +
Sbjct: 179 THRVQRVPATESQGRIHTSVVTVAIMPEAEEVDIDLRPEDVRVDVFRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +E++Q +NK++AL++LR++L +++ + + + R QVG+G
Sbjct: 239 SAIRVTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQLEQDKAKAEEDAARRIQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ RV+DHR+ + +L L+G +D+ + Q E +
Sbjct: 299 DRSERIRTYNFPQGRVSDHRINLTLHKLPQILEGELDDLTDALIGHYQAEAM 350
>gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
gi|423076030|ref|ZP_17064744.1| peptide chain release factor 1 [Desulfitobacterium hafniense DP7]
gi|254790878|sp|B8FZ76.1|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
gi|361852847|gb|EHL05045.1| peptide chain release factor 1 [Desulfitobacterium hafniense DP7]
Length = 355
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 240/349 (68%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + + +L+ L+DPEV+ N SE+QK A++ A + ++V +R++ + K LEE++
Sbjct: 4 KLIEIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQG 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E D E EM E++ L+ + ELEEK+++LLLP DP D +N+++E+RAGAGG+E
Sbjct: 64 LLEEK-LDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL RMY KY+E W+ L+S+S + GGFK ++ I+G YSKLK+ESGVHR
Sbjct: 123 AALFAGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+ GR+HTST TVA++PEA+EV+V I+P D+ + S G GGQ+VN ++A+
Sbjct: 183 VQRVPTTESGGRIHTSTTTVAVLPEAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG + C +E++QL+NK +AL++LRA+L E E ++ ++R SQVGTG R+
Sbjct: 243 RITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGTGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ RVTDHR+ + L S L G +D + + +Q E L
Sbjct: 303 ERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERL 351
>gi|409097123|ref|ZP_11217147.1| peptide chain release factor 1 [Pedobacter agri PB92]
Length = 357
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 239/357 (66%), Gaps = 4/357 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ W+D+ L++P+V+ + + L + +L ++V Y+ +K+ ++
Sbjct: 1 MLDKLEAIKLRWEDVEESLSNPDVIQDMKRFAALNKEYKDLGKIVDEYKIYKNVMSNIDA 60
Query: 114 SR-ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
++ LA E D EM EM E+ L + E+E ++++L+P DP DA+N + E+R G
Sbjct: 61 NKEILAVEK--DPEMREMAKEELDLLLKQQEEMESNIRLMLIPKDPEDAKNAVFEIRGGT 118
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA ++AGDL RMY +Y E W+ + +E GG+K V++++ G+ VY +LKYES
Sbjct: 119 GGDEAALFAGDLYRMYTRYFETKGWRVETVDVTEGTAGGYKEVILKVSGDDVYGQLKYES 178
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGRVHTS A+VA++PEA+E+++ I+P DIEL T+RSGGAGGQNVNKV
Sbjct: 179 GVHRVQRVPDTETQGRVHTSAASVAVLPEAEEIDLYINPADIELQTSRSGGAGGQNVNKV 238
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ET + L HKP+GI + C +ER+QL N+ A+++LR+KLY+I+++++ I +R + V T
Sbjct: 239 ETKVQLTHKPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKNGDIAAKRKTMVST 298
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G R+ KIRTYNY RVT+HR+ + + L + +DG I + + E E ++E A
Sbjct: 299 GDRSAKIRTYNYPQGRVTEHRIGLTMYNLPTIMDGEIQEIIDALQFAENAEKMQEGA 355
>gi|347522138|ref|YP_004779709.1| peptide chain release factor 1 [Lactococcus garvieae ATCC 49156]
gi|385833523|ref|YP_005871298.1| peptide chain release factor 1 [Lactococcus garvieae Lg2]
gi|343180706|dbj|BAK59045.1| peptide chain release factor 1 [Lactococcus garvieae ATCC 49156]
gi|343182676|dbj|BAK61014.1| peptide chain release factor 1 [Lactococcus garvieae Lg2]
Length = 357
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ +++L L+DP+VV++ + +L++ A L + V+TY ++K + + +
Sbjct: 1 MFDQLETMVGRYEELGELLSDPQVVNDTKRFMELSREEASLRDTVATYNEYKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E G DE+M EM+ E+ + ELEEK+K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGEGGLDEDMKEMLKEELSEAKSAKEELEEKIKILLLPKDPNDDKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ Y+E WK ++ +S GG+K V + G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHYAESQGWKFEIMEASVTSIGGYKEVSALVSGTSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ I+ KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPSTETQGRVHTSTATVLVMPEVEEFEMKIEQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K +R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q E L EL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVVYDQTEKLAEL 355
>gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
Length = 358
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 240/356 (67%), Gaps = 1/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L + +LS+K++DP ++SN E+QKL + ++L VV+ Y+++K + +E+
Sbjct: 1 MLERLNFIENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + ++ D E+ E+ + EIK L + EE+L++LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKEMIQDGSLDPELKELASEEIKELEILKNKYEEELRILLLPKDPNDDKNVYVEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E + + IS + + GG K +VM IKG YSKLKYESG
Sbjct: 121 GEEAALFANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVAIMPE D+VE+ I D+ + R+ G GGQ VN +
Sbjct: 181 VHRVQRVPDTESSGRIHTSTATVAIMPEVDDVEIEISANDLRIDVFRASGHGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +AL +L+A+L+E E+ I R SQVGTG
Sbjct: 241 SAVRITHLPTGIVVSCQDEKSQLKNKEKALNVLKARLFEKAESERSASIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVTDHR+ + ++L SFLDG ID + + +Q + +E +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRIGLTLYKLDSFLDGAIDEVINALITEDQAKKMEAMG 356
>gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
gi|254790901|sp|B9DS45.1|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
Length = 359
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DPEVVS+ + +L++ A E V+TYR++KD + + +
Sbjct: 3 IYDQLQSLEDRYEELGELLSDPEVVSDTKRFMELSKEEANTRETVATYRQYKDIIQSISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDPEIEEMAKEELKESKVAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ+++E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE ++VE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEDVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLETL 357
>gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
SSM1]
gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
SSM1]
Length = 355
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 250/356 (70%), Gaps = 3/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + + L+ KL+DP ++S+ YQ++A+ AEL +V Y+++K + +EE
Sbjct: 1 MFHKLEEVLEKYNILTEKLSDPNIMSDNKTYQQIAKEHAELKPIVEKYQEYKKINEDIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E+G D+E+ E+ E++ +L ++E +LK+LL+P DP D +NI LE+RAG G
Sbjct: 61 AKQIL-ESG-DKELKELAEMELEEGKEKLEKIENELKLLLVPKDPYDEKNIYLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL+RMY +Y+E++ WK ++ ++ GG+K VV+ IKG YS+LK+E G
Sbjct: 119 GDEATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLIKGKGAYSRLKFEGG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTS TVA++PEAD+VEV IDP D+ + R+ GAGGQ+VN +
Sbjct: 179 GHRVQRIPVTESGGRIHTSACTVAVLPEADDVEVEIDPSDLRIDVFRASGAGGQHVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++NK +A++LL+AK+ E+++R+QQE I + R QVG+G
Sbjct: 239 SAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQQEAIASNRKLQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ NRVTDHR+ + + L ++G +D + + A +Q E L+E+
Sbjct: 299 DRSERIRTYNFPQNRVTDHRINLTLYNLDQVMEGELDEIIDALIAYDQAEKLKEIG 354
>gi|450046399|ref|ZP_21838913.1| peptide chain release factor 1 [Streptococcus mutans N34]
gi|449198841|gb|EMB99933.1| peptide chain release factor 1 [Streptococcus mutans N34]
Length = 359
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDGKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus
Ellin6076]
gi|122252101|sp|Q01RX8.1|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
Solibacter usitatus Ellin6076]
Length = 362
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 248/354 (70%), Gaps = 3/354 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+ K + +L+ ++ADP V+S+ +Y+K+A++ +EL ++ + YR++K E L ++R
Sbjct: 6 KLDQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWKKVEDGLAQARP 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ +E D E+ EM EI L E + +EE+L+VLLLP DP D +N++LE+RAG GGDE
Sbjct: 66 MLQEQ--DAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A ++ RMY +Y+E +WK + SSSE+ GG K V+ + GN+VY+KLKYESGVHR
Sbjct: 124 ATLFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE QGRVHTS TVA++PEADEVEV ++ KDI + T S G GGQ+VN +A+
Sbjct: 184 VQRVPVTEQQGRVHTSAITVAVLPEADEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +E++Q++N+++A ++LR++LYE+++ +QQ + +R + VG+G R+
Sbjct: 244 RITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQAALGAERRTMVGSGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMNFELTSF-LDGNIDNAVQSCAAMEQKELLEELAE 409
EKIRTYN+ NRV+DHR+ + F ++G +D V + Q + L++ AE
Sbjct: 304 EKIRTYNFPQNRVSDHRIGLTLHQLDFVMEGKMDAIVDALTEFYQAQKLKQQAE 357
>gi|450063724|ref|ZP_21845079.1| peptide chain release factor 1 [Streptococcus mutans NLML5]
gi|449204385|gb|EMC05182.1| peptide chain release factor 1 [Streptococcus mutans NLML5]
Length = 359
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
gi|421452610|ref|ZP_15901971.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
salivarius K12]
gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
gi|400183041|gb|EJO17303.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
salivarius K12]
Length = 359
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTAYREYKQVIQSISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
Length = 357
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 246/354 (69%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE+ + ++++S ++ PEVVS+ + Y K+++ +L +V Y ++ +K +
Sbjct: 1 MIDKLEAIKERFEEVSQQIIQPEVVSDSTRYSKISKEYKDLGRIVEQYALYQKLQKDIAG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L DE++ EM E+ L +L ELE+ +K LL+P DP D+RNI+LE+R G G
Sbjct: 61 TKELIATE-KDEDLREMAKEELDDLLPKLEELEQNIKELLIPKDPNDSRNIILEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMYQ++ E+ W+ +++ +E GG+K ++ +++G VY K+K+ESG
Sbjct: 120 GDEAAIFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKVEGEDVYGKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGR+HTS A+VA++PEA+EV+V I+ D+ + T +S GAGGQ+VN
Sbjct: 180 VHRVQRVPATESQGRIHTSAASVAVLPEAEEVDVQINMNDVRIDTFQSSGAGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H P+G+ + C +ER+QL+NK RAL +LR++LYEI++++ + I +QR S VG+G
Sbjct: 240 SAVRLTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKHNDAISSQRKSMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R++KIRTYNY +R+TDHR+ + L + ++G+I + ++ E E ++E
Sbjct: 300 DRSDKIRTYNYPQSRITDHRIGYTVYNLPAVMEGDIADLIEKLRIAENAERMQE 353
>gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
gi|254790887|sp|B9E8G1.1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
Length = 358
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 249/359 (69%), Gaps = 3/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + ++ L+ L+DP++VS+ + ++ ++ A+L E V YR++K+ ++QLEE
Sbjct: 1 MFDQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E +D + EMI EI +L ++ ELEE++K+LL+P DP+D +N+++E+R AG
Sbjct: 61 ALEMMGE-ASDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY ++SE+ WK ++ ++EA+ GGFK + I G YSKLK+E+G
Sbjct: 120 GDEANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTSTATVA++PE ++VE+ I +D+ + T RS G+GGQ+VN +
Sbjct: 180 AHRVQRIPTTESGGRIHTSTATVAVLPEVEDVEIEIRQEDLRIETYRSSGSGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + + E++Q++N+ +AL+LL+ ++++ K++E+Q K QR S VGTG
Sbjct: 240 SAVRITHIPTGI-VATSSEKSQIKNREKALKLLKTRVFDAKLQEEQAKYSEQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+E+IRTYNY NRVTDHR+ + + L ++G + + + EQ LE L + V
Sbjct: 299 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGKLGEIIDALTIAEQTSKLEALNDGV 357
>gi|403383673|ref|ZP_10925730.1| peptide chain release factor 1 [Kurthia sp. JC30]
Length = 359
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 246/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DP++VS+ + + ++ +++ E V+ YR++K ++Q+++
Sbjct: 1 MFDRLQAVEDRYERLNELLSDPDIVSDSKKLAQYSKEQSDIQETVAVYREYKSIKEQIQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D +M EM E+K L ++ LE+K+K+LL+P DP D +NI++E+R AG
Sbjct: 61 AKDLI-EMEDDADMKEMAQEEVKELEAQIPGLEDKMKLLLIPKDPNDGKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY K++E WK ++S++ E GG+K +V+ I G+ VYSKLKYESG
Sbjct: 120 GDEAALFANSLFRMYSKFAETQGWKTEIVSANPTELGGYKEIVIMISGSDVYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+QGRVHTSTATV +MPEA EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPETESQGRVHTSTATVVVMPEAAEVELDLQDKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + +ER+QL+N+ +A+++LRA++Y+ +E+Q K +R S VGTG
Sbjct: 240 SAVRMTHIPTGVVVAMQDERSQLKNREKAMKILRARVYDKLQQEEQSKYDAERRSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + + L +DG + + + + EQ + L+ L E
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIIDGKLGDIIDALIMEEQAKKLDALNE 356
>gi|450175669|ref|ZP_21885327.1| peptide chain release factor 1 [Streptococcus mutans SM1]
gi|449246470|gb|EMC44774.1| peptide chain release factor 1 [Streptococcus mutans SM1]
Length = 359
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPDDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMKASANGVGGLKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|338211251|ref|YP_004655304.1| peptide chain release factor 1 [Runella slithyformis DSM 19594]
gi|336305070|gb|AEI48172.1| Peptide chain release factor 1 [Runella slithyformis DSM 19594]
Length = 358
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 241/355 (67%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE+ + + +++ ++ PE +++ + K+++ +LD++V Y+ +K ++
Sbjct: 1 MLEQLEAIKERFDEIAQRIVQPEAMADQKRFSKMSKEYKDLDKIVQKYQAYKKVLSDIDG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L +DEEM +M +E+ L + ELE LK +L+P DP D+ N++LE+R G G
Sbjct: 61 AKELIATE-SDEEMRDMAKAELIELQPQAEELEATLKEMLIPKDPNDSHNVILEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMYQ++ ++ WK L+ +E GG+K ++ + G VY KLK+ESG
Sbjct: 120 GDEAAIFAGDLFRMYQRFCDRMGWKMELMDFTEGSTGGYKEIIASVTGEDVYGKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP TE+QGRVHTS ATVA+MP D EV I+P DIE+ T+RSGGAGGQNVNKV
Sbjct: 180 VHRVQRVPVTESQGRVHTSAATVAVMPEVEDVEEVEINPADIEIITSRSGGAGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ET + L HKPTGI + C ER+Q N+ RA+ +LR+KLYE+++++Q + + +QR S VG+
Sbjct: 240 ETKVQLTHKPTGIVVVCQVERSQHGNRERAMNMLRSKLYEMELKKQNDAVSSQRKSLVGS 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R++KIRTYNY +RVTDHR+ + L + +DG I + ++ E E ++E
Sbjct: 300 GDRSDKIRTYNYPQSRVTDHRIGYTVYNLPTVMDGEIGDFIEQLRIAENAERMKE 354
>gi|345016594|ref|YP_004818947.1| hypothetical protein Thewi_0154 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344031937|gb|AEM77663.1| LOW QUALITY PROTEIN: hypothetical protein Thewi_0154
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 356
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 253/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP ++SN +E++K + A ++++V YR++K + +E
Sbjct: 1 MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + NDEE+ EM E+ L + +L E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI++ RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPSDIKIDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q+QN+ RAL++LRAKLYE+ ++EQQ +I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNM 353
>gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922]
gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922]
Length = 362
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA+ L+ KL + + + +++ + P+++++ + Y KL + ++L + V +++
Sbjct: 1 MADTGLLDKLRAIKQRFDEVADLIIQPDIITDQARYAKLNKEYSDLRDYVEKQEEYEGLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
LEE+ A+ +G+DEEM E+ E +++ +LEE++K +L+P DP D +N+++E+
Sbjct: 61 NVLEEANAIIA-DGSDEEMVELAKLEKDEALHKIPKLEEEIKFMLIPKDPEDDKNVIVEL 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA I+ D+ RMY Y +Q W+ ++++SEA GFK +V+ ++GN VY +
Sbjct: 120 RAGTGGDEAAIFVEDIYRMYAMYFKQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTM 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V I+P D+E TARS GAGGQN
Sbjct: 180 KYESGVHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADLEYQTARSSGAGGQN 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVET + L HKP+GI I C E R+Q +N+ +ALQLLR KLYEI+ ++ + QR S
Sbjct: 240 VNKVETKVQLTHKPSGIVIVCQEARSQHKNREKALQLLRTKLYEIEFEKKHAERSEQRKS 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELL 404
V TG R+ KIRTYNY RVTDHR+ K + L +F++G+I + + E E L
Sbjct: 300 LVSTGDRSAKIRTYNYPQGRVTDHRINKSIYNLDNFMNGDIQEMIDALKVAENAEKL 356
>gi|340750022|ref|ZP_08686869.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
Length = 358
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 245/361 (67%), Gaps = 9/361 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + + +L+ L PE++S+P + + +++A++ +V Y+++K L E
Sbjct: 1 MFAKLEEVVRRFDELNEMLGSPEILSDPKKMMECNKALADITPLVEKYKEYK----TLSE 56
Query: 114 SRALAKEN---GNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
KEN D +M EM+ E K L +L E E++LK+LLLP D D +N+++E+R
Sbjct: 57 DLQFIKENIRNEKDHDMREMMNEEQKELEEKLPEYEKELKILLLPKDENDDKNVIVEIRG 116
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGGDEA ++AGDL RMY +Y+E+ WK +I E GG K V I G YS+LK+
Sbjct: 117 GAGGDEAALFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIKEAVFSINGLGAYSRLKF 176
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNV 289
ESGVHRVQRVP+TE+ GRVHTSTATVA++PE ++V EV IDPKD+++ T RSGGAGGQ+V
Sbjct: 177 ESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPKDLKIDTYRSGGAGGQHV 236
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N ++A+ + H PTGI + C +ER+QL+N+ +A++ L +KLYE++ +Q+ ++ ++R Q
Sbjct: 237 NMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYEMECEKQRSQVESERKLQ 296
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+EKIRTYN+ R+TDHR+K ++L +FLDG+ID + + Q E+L +
Sbjct: 297 VGTGDRSEKIRTYNFPQGRITDHRIKFTVYQLDAFLDGDIDEMIDALITFNQAEMLASAS 356
Query: 409 E 409
E
Sbjct: 357 E 357
>gi|450004844|ref|ZP_21826307.1| peptide chain release factor 1 [Streptococcus mutans NMT4863]
gi|449189413|gb|EMB91080.1| peptide chain release factor 1 [Streptococcus mutans NMT4863]
Length = 359
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E +WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQAWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|400290315|ref|ZP_10792342.1| peptide chain release factor 1 [Streptococcus ratti FA-1 = DSM
20564]
gi|399921106|gb|EJN93923.1| peptide chain release factor 1 [Streptococcus ratti FA-1 = DSM
20564]
Length = 359
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 236/356 (66%), Gaps = 1/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E+V+ YR++K + + +
Sbjct: 3 IYDQLQTVEDRYEELGELLSDPDVVSDTKRFMELSREEASTREMVTAYREYKQIIQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAESQGWKFEIMEASMNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE+L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVIDALVLYDQTQKLEKLG 358
>gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
49124]
gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
49124]
Length = 359
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLAMYQKYAETQGWRFDVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEEL 357
>gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
Length = 359
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEEL 357
>gi|385814148|ref|YP_005850541.1| Peptide chain release factor 1 [Lactobacillus helveticus H10]
gi|403515347|ref|YP_006656167.1| peptide chain release factor 1 [Lactobacillus helveticus R0052]
gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10]
gi|403080785|gb|AFR22363.1| peptide chain release factor 1 [Lactobacillus helveticus R0052]
Length = 362
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K+ +K++ +
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N D ++ EM E + E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-NETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ +WK ++I S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|418425287|ref|ZP_12998381.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387717083|gb|EIK05109.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS1]
Length = 358
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DPEVV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPEVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
200]
gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
200]
Length = 356
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 253/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP ++SN +E++K + A ++++V YR++K + +E
Sbjct: 1 MIDKLQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + NDEE+ EM E+ L + +L E++K+LL+P DP D +N+++E+RAGAG
Sbjct: 61 TKELL--SSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+E + GGFK V++ I G YS+LKYESG
Sbjct: 119 GEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PE +EV+V I+P DI++ RSGG GGQ+VN +
Sbjct: 179 VHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q+QN+ RAL++LRAKLYE+ ++EQQ +I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + L LDG++D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQAEKLKNM 353
>gi|347549846|ref|YP_004856174.1| putative peptide chain release factor 1 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982917|emb|CBW86951.1| Putative peptide chain release factor 1 [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 358
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 240/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ L+DP+VVS+P + L++ + + V TYR++K+ Q+EE
Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNAQIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D+ M EM E L E ++LEE+LK+LL+P DP D +N++LE+R AG
Sbjct: 61 TKELLSEKLDDD-MREMAKEEFAELQKEKVDLEERLKLLLVPKDPNDDKNVILEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E WK ++ ++ GG+K ++ + GN +S++KYE+G
Sbjct: 120 GDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVAI+PEA+EVE+ + KDI T S GAGGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+NK +A+++LRA++Y+ RE +E+ R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + +Q LE L ++
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLNDA 357
>gi|392970038|ref|ZP_10335447.1| peptide chain release factor 1 [Staphylococcus equorum subsp.
equorum Mu2]
gi|403046013|ref|ZP_10901488.1| peptide chain release factor 1 [Staphylococcus sp. OJ82]
gi|392511966|emb|CCI58654.1| peptide chain release factor 1 [Staphylococcus equorum subsp.
equorum Mu2]
gi|402764175|gb|EJX18262.1| peptide chain release factor 1 [Staphylococcus sp. OJ82]
Length = 358
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VVS+P +K ++ ++L + V YR +K ++ + E
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVSDPDNLRKYSKEQSDLQKTVEVYRNYKQVKEDIVE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ KE + +E+ EM+ E +SL+N++ +LEE LK LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLKETKDSDEI-EMLKEEHQSLNNQVPKLEENLKFLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AG+L RMY KY+E +K ++ ++E++ GG+K + I G+ YSKLKYE+G
Sbjct: 120 GDEAAIFAGNLFRMYSKYAEAQRYKTEIVEAAESDHGGYKEISFSISGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ + +DI++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEVRNEDIKVDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I + E++Q+QN+ +A+++L+A+L+++K++E+Q+K QR S VG+G
Sbjct: 240 SAVRITHVPTGI-IATSSEKSQIQNREKAMKVLKARLFDMKLQEEQQKYAAQRKSAVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G +D + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTIQKLDQVMEGKLDEVIDALTLAEQTDKLKEL 353
>gi|340398632|ref|YP_004727657.1| peptide chain release factor 1 (RF-1) [Streptococcus salivarius
CCHSS3]
gi|387761122|ref|YP_006068099.1| peptide chain release factor 1 [Streptococcus salivarius 57.I]
gi|387784327|ref|YP_006070410.1| peptide chain release factor 1 (RF-1) [Streptococcus salivarius
JIM8777]
gi|418017635|ref|ZP_12657191.1| peptide chain release factor 1 [Streptococcus salivarius M18]
gi|338742625|emb|CCB93130.1| peptide chain release factor 1 (RF-1) [Streptococcus salivarius
CCHSS3]
gi|338745209|emb|CCB95575.1| peptide chain release factor 1 (RF-1) [Streptococcus salivarius
JIM8777]
gi|339291889|gb|AEJ53236.1| peptide chain release factor 1 [Streptococcus salivarius 57.I]
gi|345526484|gb|EGX29795.1| peptide chain release factor 1 [Streptococcus salivarius M18]
Length = 359
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTAYREYKQVIQSISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEEL 357
>gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421]
gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421]
Length = 371
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 241/351 (68%), Gaps = 2/351 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+LE+ WK + +++ DP++V N + Y+ + + L +++ Y + EKQL+E+ A
Sbjct: 19 RLENLRNQWKQVELEVQDPDLVKNVARYKDVMRQHGYLSKLMDEYDFYLQTEKQLQEAHA 78
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E +D E+ EM E+ +L +L + E LK+LL+P DP++ +NI++E+R G GGDE
Sbjct: 79 LMQEE-SDHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRGGTGGDE 137
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL +MY Y+E +W ++ ++E E GGFK +V I G VY L+YESGVHR
Sbjct: 138 AALFAADLFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRYESGVHR 197
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE GR+HTS TVA++PEA+E E+VI P+D+ + R+GG GGQ+VN ++A+
Sbjct: 198 VQRVPETEGSGRIHTSAVTVAVLPEAEETEIVIKPEDLRVDVMRAGGPGGQSVNTTDSAV 257
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
L H PTG+ + C +E++Q++NK++AL++LR++LY+++ ++ ++ R SQVG+G R+
Sbjct: 258 RLTHIPTGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQERAQNRKSQVGSGDRS 317
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
E+IRTYN+ NRVTDHR+ + ++L + L G++D ++ ++E+L E
Sbjct: 318 ERIRTYNFPQNRVTDHRINLTLYQLDAVLQGDLDEIIEPLCIAAREEMLNE 368
>gi|365903576|ref|ZP_09441399.1| peptide chain release factor 1 [Lactobacillus malefermentans KCTC
3548]
Length = 357
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 240/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPE++++ + KL++ EL E V Y ++K +Q++E
Sbjct: 1 MFEKLQAVADRYDELNELISDPEIIADTQRFMKLSKEEGELRETVEKYNQYKKVTEQIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E +D+ M ++ E+K E LE+++K+LLLP+DP D +NI++E+ AG
Sbjct: 61 NNELLREKLDDD-MDALVKEELKEQEAEKTSLEDEIKILLLPTDPNDDKNIIMEIHGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY KY+E+ +W +I SE E GGFK +V+ I GN+VYSKLKYE+G
Sbjct: 120 GDEASLFAVDLFNMYTKYAEKQNWTVEVIDKSETEVGGFKEIVLMITGNKVYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPEA++V++ IDPKDI RS GAGGQ++NK
Sbjct: 180 AHRVQRIPVTESAGRVHTSTATVGVMPEAEDVDIDIDPKDIRTDVYRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+ +A+++LRA++Y+ +++ + +R S VG+G
Sbjct: 240 SAVRMTHLPTGIVVAMQDERSQQQNRVKAMKILRARVYDYYQQQETDAYDAERKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G ++ + + +Q LE L
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEEVIDALILSDQAAKLENL 354
>gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150]
gi|419706570|ref|ZP_14234088.1| Peptide chain release factor 1 (RF-1) [Streptococcus salivarius
PS4]
gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150]
gi|383283605|gb|EIC81551.1| Peptide chain release factor 1 (RF-1) [Streptococcus salivarius
PS4]
Length = 359
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQNITD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EV+ IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVDYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|290580477|ref|YP_003484869.1| peptide chain release factor 1 [Streptococcus mutans NN2025]
gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans
NN2025]
Length = 359
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP++VS+ + KL++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDIVSDTKCFMKLSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ +D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASDDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
bromii L2-63]
Length = 357
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 245/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E K + +LS +L P V NP EYQK+ + + ++E+V TYRK+K+ + ++
Sbjct: 1 MFEKIEIFDKRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAVQTEKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E +D+E+ E+ E+ + + L E LK+LLLP DP D RN+++E+R GAG
Sbjct: 61 SLEILEET-SDKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+E+ +++ L RMY Y+E+ +K +I+++E E GG+K + I+G YS+ KYESG
Sbjct: 120 GEESALFSAVLFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTST TVA++PEA++VE+ IDP D+++ T RS GAGGQ++NK
Sbjct: 180 VHRVQRVPETESQGRVHTSTTTVAVLPEAEDVELEIDPNDLKIDTFRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +ER+Q +NK +AL++L+++L + K +Q +I R QVGTG
Sbjct: 240 SAIRITHLPTGMVVECQDERSQYKNKDKALKVLKSRLLKEKQDKQASEIAENRKMQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L L+G++D + + A ++ E L+E E
Sbjct: 300 DRSERIRTYNYPQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVAADRAEKLKESME 356
>gi|357406696|ref|YP_004918620.1| peptide chain release factor 1 [Methylomicrobium alcaliphilum 20Z]
gi|351719361|emb|CCE25037.1| Peptide chain release factor 1 (RF-1) [Methylomicrobium
alcaliphilum 20Z]
Length = 361
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 251/361 (69%), Gaps = 4/361 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + KL + ++ + +++ LA+PEV +N ++++ L+Q A+++ +V+ Y+++ D + L
Sbjct: 3 PSIEHKLANLSERFDEITALLAEPEVQANQNKFRSLSQEYAQINPIVTCYKRYLDTAENL 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
++ +AK+ D ++ EM EI + + +E++L++LLLP DP D RNI LE+RAG
Sbjct: 63 AGAQEMAKDP--DLDLREMAREEILAAEKQQEVIEQELQILLLPRDPNDNRNIFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA I++GDL RMYQ+Y+E+ WK +I+ +E E GG+K +++ + G VYS+LK+E
Sbjct: 121 TGGDEAAIFSGDLARMYQRYAEKKGWKTEIINENEGEHGGYKEIILRVTGQDVYSQLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TE+QGR+HTS TVA+MPE +EV+ + I+P D+ + T RS GAGGQ+VN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEVEEVDAIDINPADLRIDTYRSSGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H P+GI + C +ER+Q +N++RA+ LL+++L + + Q + + R QV
Sbjct: 241 KTDSAIRITHLPSGIVVECQDERSQHKNRARAMSLLQSRLLSAEQEKHQAEQQANRKLQV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY R+TDHR+ + ++L ++G +++ ++ Q ELL +L E
Sbjct: 301 GSGDRSERIRTYNYPQGRMTDHRINLTLYKLDEIMEGGLNHVIEPLINEHQAELLTQLGE 360
Query: 410 S 410
+
Sbjct: 361 N 361
>gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315]
gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1]
gi|386362683|ref|YP_006072014.1| peptide chain release factor 1 [Streptococcus pyogenes Alab49]
gi|342165345|sp|P0DD94.1|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|342165346|sp|P0DD95.1|RF1_STRPQ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes
MGAS315]
gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes
SSI-1]
gi|350277092|gb|AEQ24460.1| peptide chain release factor 1 [Streptococcus pyogenes Alab49]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESL 357
>gi|421767673|ref|ZP_16204416.1| Peptide chain release factor 1 [Lactococcus garvieae DCC43]
gi|407623776|gb|EKF50585.1| Peptide chain release factor 1 [Lactococcus garvieae DCC43]
Length = 357
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ +++L L+DP+VV++ + +L++ A L + V+TY ++K + + +
Sbjct: 1 MFDQLETMVGRYEELGELLSDPQVVNDTKRFMELSREEANLRDTVATYNEYKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E+G D++M EM+ E+ +E LEEK+K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGESGLDDDMKEMLKEELSEAKSEKEVLEEKIKILLLPKDPNDDKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ Y+E WK ++ +S GG+K V + G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHYAESQGWKFEIMEASMTSIGGYKEVSALVSGTSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ I+ KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPSTETQGRVHTSTATVLVMPEVEEFEMKIEQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K +R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q E L EL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVVYDQTEKLAEL 355
>gi|450180496|ref|ZP_21887272.1| peptide chain release factor 1 [Streptococcus mutans 24]
gi|449248258|gb|EMC46517.1| peptide chain release factor 1 [Streptococcus mutans 24]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDANGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|387786131|ref|YP_006251227.1| peptide chain release factor 1 [Streptococcus mutans LJ23]
gi|397649745|ref|YP_006490272.1| peptide chain release factor 1 [Streptococcus mutans GS-5]
gi|449902773|ref|ZP_21791704.1| peptide chain release factor 1 [Streptococcus mutans M230]
gi|449908258|ref|ZP_21793605.1| peptide chain release factor 1 [Streptococcus mutans OMZ175]
gi|449918584|ref|ZP_21797441.1| peptide chain release factor 1 [Streptococcus mutans 1SM1]
gi|449932015|ref|ZP_21802606.1| peptide chain release factor 1 [Streptococcus mutans 3SN1]
gi|449960361|ref|ZP_21810619.1| peptide chain release factor 1 [Streptococcus mutans 4VF1]
gi|449965769|ref|ZP_21812003.1| peptide chain release factor 1 [Streptococcus mutans 15VF2]
gi|449968833|ref|ZP_21812846.1| peptide chain release factor 1 [Streptococcus mutans 2VS1]
gi|449982426|ref|ZP_21818280.1| peptide chain release factor 1 [Streptococcus mutans 5SM3]
gi|450002276|ref|ZP_21826004.1| peptide chain release factor 1 [Streptococcus mutans N29]
gi|450056720|ref|ZP_21842205.1| peptide chain release factor 1 [Streptococcus mutans NLML4]
gi|450066963|ref|ZP_21846295.1| peptide chain release factor 1 [Streptococcus mutans NLML9]
gi|450071652|ref|ZP_21848238.1| peptide chain release factor 1 [Streptococcus mutans M2A]
gi|450086416|ref|ZP_21853636.1| peptide chain release factor 1 [Streptococcus mutans NV1996]
gi|450099006|ref|ZP_21858272.1| peptide chain release factor 1 [Streptococcus mutans SF1]
gi|450124852|ref|ZP_21867271.1| peptide chain release factor 1 [Streptococcus mutans U2A]
gi|450132662|ref|ZP_21870202.1| peptide chain release factor 1 [Streptococcus mutans NLML8]
gi|450137774|ref|ZP_21871824.1| peptide chain release factor 1 [Streptococcus mutans NLML1]
gi|450165618|ref|ZP_21881920.1| peptide chain release factor 1 [Streptococcus mutans B]
gi|450169722|ref|ZP_21883133.1| peptide chain release factor 1 [Streptococcus mutans SM4]
gi|379132532|dbj|BAL69284.1| peptide chain release factor 1 [Streptococcus mutans LJ23]
gi|392603314|gb|AFM81478.1| peptide chain release factor 1 [Streptococcus mutans GS-5]
gi|449152827|gb|EMB56525.1| peptide chain release factor 1 [Streptococcus mutans NLML8]
gi|449160209|gb|EMB63487.1| peptide chain release factor 1 [Streptococcus mutans 1SM1]
gi|449161882|gb|EMB65052.1| peptide chain release factor 1 [Streptococcus mutans 3SN1]
gi|449167717|gb|EMB70584.1| peptide chain release factor 1 [Streptococcus mutans 4VF1]
gi|449170899|gb|EMB73586.1| peptide chain release factor 1 [Streptococcus mutans 15VF2]
gi|449174684|gb|EMB77159.1| peptide chain release factor 1 [Streptococcus mutans 2VS1]
gi|449174898|gb|EMB77356.1| peptide chain release factor 1 [Streptococcus mutans 5SM3]
gi|449183393|gb|EMB85377.1| peptide chain release factor 1 [Streptococcus mutans N29]
gi|449206465|gb|EMC07168.1| peptide chain release factor 1 [Streptococcus mutans NLML4]
gi|449208397|gb|EMC08992.1| peptide chain release factor 1 [Streptococcus mutans NLML9]
gi|449212086|gb|EMC12464.1| peptide chain release factor 1 [Streptococcus mutans M2A]
gi|449219559|gb|EMC19522.1| peptide chain release factor 1 [Streptococcus mutans NV1996]
gi|449221039|gb|EMC20844.1| peptide chain release factor 1 [Streptococcus mutans SF1]
gi|449233397|gb|EMC32473.1| peptide chain release factor 1 [Streptococcus mutans U2A]
gi|449234812|gb|EMC33799.1| peptide chain release factor 1 [Streptococcus mutans NLML1]
gi|449240451|gb|EMC39126.1| peptide chain release factor 1 [Streptococcus mutans B]
gi|449246875|gb|EMC45170.1| peptide chain release factor 1 [Streptococcus mutans SM4]
gi|449262064|gb|EMC59521.1| peptide chain release factor 1 [Streptococcus mutans M230]
gi|449263072|gb|EMC60506.1| peptide chain release factor 1 [Streptococcus mutans OMZ175]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|450081955|ref|ZP_21852058.1| peptide chain release factor 1 [Streptococcus mutans N66]
gi|449214719|gb|EMC14958.1| peptide chain release factor 1 [Streptococcus mutans N66]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKL+ LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+++ + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIELTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM
266]
gi|166223545|sp|A1BJT9.1|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
phaeobacteroides DSM 266]
Length = 357
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/354 (47%), Positives = 245/354 (69%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + +DL +L DP + + ++KL + +L +V Y ++ +KQLEE
Sbjct: 1 MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L K N +++M M+ EI SL ++E E++LK+LLLP D +D+RN+++E+RAG G
Sbjct: 61 SRLLLK-NEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
G+EA ++A DLVRMYQ+++EQ WK ++ +E+ GGF+ +V+ + G+ VY +KYES
Sbjct: 120 GEEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+HTS A+VA++PEA+EV+V I D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRKDDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H+P+GI + C EER+QLQNK RA+++LRAKLY+ ++ EQQEK R S V T
Sbjct: 240 ETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRSMVTT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+ KIRTYNY +RVTDHR+ + L + G+I + +++ +Q E L+
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGDIKDIIEALKMHDQAERLQ 353
>gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
20075]
gi|172048215|sp|A8YUJ1.1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
20075]
Length = 362
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K+ +K++ +
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N D ++ EM E + E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-NETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ +WK ++I S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q K +R + +GTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAKYDAKRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|449882031|ref|ZP_21784728.1| peptide chain release factor 1 [Streptococcus mutans SA38]
gi|449924231|ref|ZP_21799509.1| peptide chain release factor 1 [Streptococcus mutans 4SM1]
gi|449937468|ref|ZP_21804584.1| peptide chain release factor 1 [Streptococcus mutans 2ST1]
gi|449947903|ref|ZP_21807696.1| peptide chain release factor 1 [Streptococcus mutans 11SSST2]
gi|450034675|ref|ZP_21834529.1| peptide chain release factor 1 [Streptococcus mutans M21]
gi|450052682|ref|ZP_21841354.1| peptide chain release factor 1 [Streptococcus mutans NFSM1]
gi|450077575|ref|ZP_21850521.1| peptide chain release factor 1 [Streptococcus mutans N3209]
gi|450109601|ref|ZP_21861541.1| peptide chain release factor 1 [Streptococcus mutans SM6]
gi|450144893|ref|ZP_21874319.1| peptide chain release factor 1 [Streptococcus mutans 1ID3]
gi|450154340|ref|ZP_21877690.1| peptide chain release factor 1 [Streptococcus mutans 21]
gi|450159218|ref|ZP_21879325.1| peptide chain release factor 1 [Streptococcus mutans 66-2A]
gi|449150125|gb|EMB53902.1| peptide chain release factor 1 [Streptococcus mutans 1ID3]
gi|449163054|gb|EMB66169.1| peptide chain release factor 1 [Streptococcus mutans 4SM1]
gi|449164263|gb|EMB67330.1| peptide chain release factor 1 [Streptococcus mutans 2ST1]
gi|449168082|gb|EMB70920.1| peptide chain release factor 1 [Streptococcus mutans 11SSST2]
gi|449196201|gb|EMB97486.1| peptide chain release factor 1 [Streptococcus mutans M21]
gi|449200105|gb|EMC01151.1| peptide chain release factor 1 [Streptococcus mutans NFSM1]
gi|449210982|gb|EMC11404.1| peptide chain release factor 1 [Streptococcus mutans N3209]
gi|449225957|gb|EMC25522.1| peptide chain release factor 1 [Streptococcus mutans SM6]
gi|449237947|gb|EMC36742.1| peptide chain release factor 1 [Streptococcus mutans 21]
gi|449241504|gb|EMC40130.1| peptide chain release factor 1 [Streptococcus mutans 66-2A]
gi|449250585|gb|EMC48638.1| peptide chain release factor 1 [Streptococcus mutans SA38]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|393760528|ref|ZP_10349337.1| peptide chain release factor 1 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161263|gb|EJC61328.1| peptide chain release factor 1 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/341 (44%), Positives = 242/341 (70%), Gaps = 6/341 (1%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
++LE A+ ++ LA+PE+ N E++KL++ AELD VV+ ++ ++ E L+
Sbjct: 7 SRLEQLARRLHEVDAMLAEPEIAGNMDEFRKLSRERAELDPVVTAFKSYEAAEGDLQ--- 63
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
A++ D E+ EM E K + +LE++L++LLLP DP D RN+ +E+RAGAGGD
Sbjct: 64 -AAQDMMTDPELKEMGEEEYKLGKERIAQLEDELQILLLPRDPDDTRNVFIEIRAGAGGD 122
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
E+ ++AGDL+RMY +Y+E W+ ++S+S++E GG+K V++ I+G VY +LK+ESG H
Sbjct: 123 ESALFAGDLLRMYMRYAENCGWRTEIMSASDSEVGGYKEVIVRIEGQDVYGRLKFESGAH 182
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVP+TEAQGR+HTST TVA++PEA+ + E+ I+P D+ + T R+ GAGGQ+VNK ++
Sbjct: 183 RVQRVPETEAQGRIHTSTCTVAVLPEAEGLAEITINPADLRVDTFRASGAGGQHVNKTDS 242
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ L H PTG+ + C ++R+Q +N+ +ALQ+L A+L + + REQ +K +R S VGTG
Sbjct: 243 AVRLTHLPTGLVVECQDDRSQHRNREKALQVLAARLKDKQQREQSDKEAAERKSLVGTGD 302
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQS 394
R+E+IRTYN+ R+TDHR+ + ++L +DG++D +++
Sbjct: 303 RSERIRTYNFPQGRMTDHRINLTLYKLGYIMDGDLDELIKA 343
>gi|449886068|ref|ZP_21785948.1| peptide chain release factor 1 [Streptococcus mutans SA41]
gi|449915618|ref|ZP_21796387.1| peptide chain release factor 1 [Streptococcus mutans 15JP3]
gi|449944542|ref|ZP_21806794.1| peptide chain release factor 1 [Streptococcus mutans 11A1]
gi|450038996|ref|ZP_21836004.1| peptide chain release factor 1 [Streptococcus mutans T4]
gi|449148500|gb|EMB52367.1| peptide chain release factor 1 [Streptococcus mutans 11A1]
gi|449156261|gb|EMB59736.1| peptide chain release factor 1 [Streptococcus mutans 15JP3]
gi|449200953|gb|EMC01970.1| peptide chain release factor 1 [Streptococcus mutans T4]
gi|449254714|gb|EMC52612.1| peptide chain release factor 1 [Streptococcus mutans SA41]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDANGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|449891144|ref|ZP_21787748.1| peptide chain release factor 1 [Streptococcus mutans SF12]
gi|449975112|ref|ZP_21815637.1| peptide chain release factor 1 [Streptococcus mutans 11VS1]
gi|449988806|ref|ZP_21820761.1| peptide chain release factor 1 [Streptococcus mutans NVAB]
gi|449994910|ref|ZP_21822804.1| peptide chain release factor 1 [Streptococcus mutans A9]
gi|450009833|ref|ZP_21828359.1| peptide chain release factor 1 [Streptococcus mutans A19]
gi|450023189|ref|ZP_21830453.1| peptide chain release factor 1 [Streptococcus mutans U138]
gi|449177377|gb|EMB79680.1| peptide chain release factor 1 [Streptococcus mutans 11VS1]
gi|449183464|gb|EMB85447.1| peptide chain release factor 1 [Streptococcus mutans NVAB]
gi|449184832|gb|EMB86745.1| peptide chain release factor 1 [Streptococcus mutans A9]
gi|449190732|gb|EMB92286.1| peptide chain release factor 1 [Streptococcus mutans A19]
gi|449193891|gb|EMB95261.1| peptide chain release factor 1 [Streptococcus mutans U138]
gi|449256839|gb|EMC54651.1| peptide chain release factor 1 [Streptococcus mutans SF12]
Length = 359
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASTNGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|433460004|ref|ZP_20417640.1| peptide chain release factor 1 [Halobacillus sp. BAB-2008]
gi|432192120|gb|ELK49033.1| peptide chain release factor 1 [Halobacillus sp. BAB-2008]
Length = 356
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 246/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I +L++ ++ L+ L+DPEV+S+ ++ ++ ++ + L V YR++K+ +QL +
Sbjct: 1 MIERLQTLEDRYEKLNELLSDPEVISDTNKLREYSKEQSGLQATVDAYREYKEVTEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ ++ +D +M EM+ EI+ LS + ELEE+LKVL+LP DP D +N+++EVR AG
Sbjct: 61 AKAML-DDESDADMTEMVKEEIRELSGQKQELEERLKVLMLPKDPNDDKNVIMEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++ ++ ++ GG+K ++ + GN YSKLK+E+G
Sbjct: 120 GDEASLFAGDLYRMYARYAESQGWKTEVLEANPSDVGGYKEIIFMVNGNMAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATV +MPEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVVVMPEAEEVEVEIHDKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H+PTGI + +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHEPTGIVVSIQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDESRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ + + L L GN+ + + EQ + LE+L E
Sbjct: 300 DRSERIRTYNFPQTRVTDHRIGLTLQKLDQVLQGNMSEIIDALLMEEQAKKLEQLGE 356
>gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
10782]
gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
10782]
Length = 359
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFSQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESL 357
>gi|352516337|ref|YP_004885654.1| peptide chain release factor 1 [Tetragenococcus halophilus NBRC
12172]
gi|348600444|dbj|BAK93490.1| peptide chain release factor 1 [Tetragenococcus halophilus NBRC
12172]
Length = 358
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 242/352 (68%), Gaps = 2/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L+ +++L ++DP+V+++ + + KL++ A+L E V Y+++K E+ + E
Sbjct: 5 QLQKIEDRYQELGELMSDPDVIADTNRFMKLSKEEADLRETVEVYQRYKKVEEDISEDEE 64
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ EN DEEM ++ E+ L E EL+E++K+LLLP DP D +NI++E+R AGGDE
Sbjct: 65 MLSENL-DEEMTDLAKEELAELKKEEAELQEQIKILLLPKDPNDNKNIIMEIRGAAGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL MYQ+Y+E WK ++ +S GG+K V+M I GN+VYSKLKYESG HR
Sbjct: 124 AALFAGDLFDMYQRYAESQGWKVEVMDASITGIGGYKEVIMMITGNKVYSKLKYESGAHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE+QGRVHTSTATV +MPEA+EVE+ ID KDI + GAGGQ+VNK +A+
Sbjct: 184 VQRVPETESQGRVHTSTATVVVMPEAEEVELDIDDKDIRTDIYHASGAGGQHVNKTASAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
L H PTGI + +ER+Q++N+ +A+++LRA+LY+ +E Q + R S +G+G R+
Sbjct: 244 RLTHIPTGIVVAMQDERSQIKNREKAMKVLRARLYDKYEQEAQNEYDANRRSAIGSGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + +L LDG+++ +++ +Q LEEL
Sbjct: 304 ERIRTYNFPQNRVTDHRINLTVQQLDKILDGDLEEIIEALILYDQTSKLEEL 355
>gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49
591]
gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180]
gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005]
gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131]
gi|383480011|ref|YP_005388905.1| peptide chain release factor (1) PrfA [Streptococcus pyogenes
MGAS15252]
gi|383493927|ref|YP_005411603.1| peptide chain release factor (1) PrfA [Streptococcus pyogenes
MGAS1882]
gi|410680534|ref|YP_006932936.1| peptide chain release factor 1 [Streptococcus pyogenes A20]
gi|421893215|ref|ZP_16323765.1| Peptide chain release factor 1 [Streptococcus pyogenes NS88.2]
gi|119361623|sp|Q48TL0.1|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238054473|sp|B5XLI8.1|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
MGAS6180]
gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
MGAS5005]
gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131]
gi|378928001|gb|AFC66207.1| peptide chain release factor (1) PrfA [Streptococcus pyogenes
MGAS15252]
gi|378929655|gb|AFC68072.1| peptide chain release factor (1) PrfA [Streptococcus pyogenes
MGAS1882]
gi|379981011|emb|CCG27487.1| Peptide chain release factor 1 [Streptococcus pyogenes NS88.2]
gi|395453911|dbj|BAM30250.1| peptide chain release factor 1 [Streptococcus pyogenes M1 476]
gi|409693123|gb|AFV37983.1| peptide chain release factor 1 [Streptococcus pyogenes A20]
Length = 359
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESL 357
>gi|379796442|ref|YP_005326443.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356873435|emb|CCE59774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 358
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKSKKEELTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L E + EE+ EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEELLNETEDKEEI-EMLKEESSGIKAELPNLEEELKILLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESEGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|410669049|ref|YP_006921420.1| peptide chain release factor 1 [Thermacetogenium phaeum DSM 12270]
gi|409106796|gb|AFV12921.1| peptide chain release factor 1 [Thermacetogenium phaeum DSM 12270]
Length = 363
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL S + DL KL DP V+++ +++ A+ AEL ++V+ +R+FK +++E
Sbjct: 1 MMEKLASLEALYIDLEQKLGDPAVIADIDRWRQYAKRHAELTDIVTAFREFKKTCQEIES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L +E+ D E+ ++ +E+ L + LEE+LK++LLP DP D +N+++E+RAG G
Sbjct: 61 TKSLLEESA-DAELRDLAEAELVELRKKKESLEEELKIMLLPRDPRDEKNVIVEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY Y+EQ WK ++SS + GGFK ++ ++ G+ VYSKLKYESG
Sbjct: 120 GEEAALFAGDLFRMYSYYAEQQGWKVEVLSSHATDMGGFKEIIFQVSGDHVYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTS ATVA++PEA+EV+V I+P+D+ + S G GGQ+VN +
Sbjct: 180 VHRVQRIPVTESAGRIHTSAATVAVLPEAEEVDVEINPQDLRIDIFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK +A+++LRA+L + +EQQ ++ + R S VG+G
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKEKAMRVLRARLLDRAQKEQQGELSSLRRSMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + + L L G+++ + + A ++ E L+E A
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTIYRLPEILKGDLEELITALIAADRAEQLKEQA 355
>gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
SR1/5]
Length = 358
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L +L +P V +P+ +QKL + ++L +V Y+++K ++ +E+
Sbjct: 1 MFDKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S ++ E+ DEEM EM+ E+ + ELE +LK+LLLP DP D++N+++E+R GAG
Sbjct: 61 SLSML-ESEKDEEMREMLKEELSDAKKRVEELEHELKILLLPKDPNDSKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY KY+E WK ++S +E GGFK V IKG YS+LKYESG
Sbjct: 120 GDEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+E++ +D + + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTCTVAIMPEAEEIDFHLDLNECKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++QL+NK +AL++LR++LYE+++ +Q + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHDAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ L + L+G++D + S A +Q L +L E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIAADQAVKLTKLNE 356
>gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
ATCC 33861]
gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
ATCC 33861]
Length = 364
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 242/355 (68%), Gaps = 2/355 (0%)
Query: 53 YLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLE 112
+++ KL++ + W+++ +L++P+ +S+ + KL + +L ++V Y +K+ ++
Sbjct: 7 FMLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLSKIVDQYHIYKNMVSNID 66
Query: 113 ESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
++ + N D+E+ EM E+ L + E EE+++++L+P DP DA+N ++E+R G
Sbjct: 67 ANKDILA-NEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGT 125
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA ++AGDL RMY ++ E W+ ++ +E GG+K V++++ G VY +LKYES
Sbjct: 126 GGDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGEDVYGQLKYES 185
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGRVHTS A+VA++PEA++V+V ++P DIE+ T+RSGGAGGQNVNKV
Sbjct: 186 GVHRVQRVPDTETQGRVHTSAASVAVLPEAEDVDVELNPGDIEMQTSRSGGAGGQNVNKV 245
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ET + L HKP+GI + C ER+QL N+ A+++LR KLYE++V+++ I +R + V T
Sbjct: 246 ETKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKKHGDIAAKRKTMVST 305
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R+ K+RTYNY RVT+HR+ + + L + +DG+I + + E E ++E
Sbjct: 306 GDRSAKVRTYNYPQGRVTEHRIGLTLYNLPAVMDGDIQGIIDALQFAENAEKMKE 360
>gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 353
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 250/355 (70%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS KL+DPE + + E++K+A+ A L+E+V YR++K ++
Sbjct: 1 MIDKLKTIEDRYVELSRKLSDPESMKDMDEWKKMAKEHASLEEIVQKYREYKKVLDDIKS 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + D+++ +M E+KSL +L ++K+LLLP DP D +++++E+RAGAG
Sbjct: 61 TKEIIE---LDDDLKDMAQEELKSLEERENKLLNEIKLLLLPKDPNDEKDVIMEIRAGAG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+ E GGFK V++ I G YS+LK+ESG
Sbjct: 118 GEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNIAGKGAYSRLKFESG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PE ++V++ I+P DI++ RSGG GGQ+VN +
Sbjct: 178 VHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +ER+QLQN+ RA+++LRAKLYE+ E++++I R QVGTG
Sbjct: 238 SAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEKEISMTRKLQVGTG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + A +Q E LE +
Sbjct: 298 DRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQAERLESM 352
>gi|420144781|ref|ZP_14652266.1| Peptide chain release factor 1 (RF-1) [Lactococcus garvieae IPLA
31405]
gi|391855245|gb|EIT65797.1| Peptide chain release factor 1 (RF-1) [Lactococcus garvieae IPLA
31405]
Length = 357
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ +++L L+DP+VV++ + +L++ A L + V+TY + K + + +
Sbjct: 1 MFDQLETMVGRYEELGELLSDPQVVNDTKRFMELSREEASLRDTVATYNEHKKVLETISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E G DE+M EM+ E+ + ELEEK+K+LLLP DP D +NI+LE+R AG
Sbjct: 61 SEEMLGEGGLDEDMKEMLKEELSEAKSAKEELEEKIKILLLPKDPNDDKNIILEIRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ Y+E WK ++ +S GG+K V + G VYSKLKYESG
Sbjct: 121 GDEAALFAGDLLNMYQHYAESQGWKFEIMEASVTSIGGYKEVSALVSGTSVYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E E+ I+ KD+ + + GAGGQNVNKV
Sbjct: 181 AHRVQRVPSTETQGRVHTSTATVLVMPEVEEFEMKIEQKDLRVDIYHASGAGGQNVNKVA 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++LL K+++ + + +K +R S VGTG
Sbjct: 241 TAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYYQQIELDKQNAERKSTVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q E L EL
Sbjct: 301 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVVYDQTEKLAEL 355
>gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1]
gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
gi|423317857|ref|ZP_17295754.1| peptide chain release factor 1 [Lactobacillus crispatus FB049-03]
gi|423321196|ref|ZP_17299068.1| peptide chain release factor 1 [Lactobacillus crispatus FB077-07]
gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1]
gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
gi|405596519|gb|EKB69855.1| peptide chain release factor 1 [Lactobacillus crispatus FB077-07]
gi|405597793|gb|EKB71044.1| peptide chain release factor 1 [Lactobacillus crispatus FB049-03]
Length = 362
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K+ +K++E+
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIED 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + D ++ EM E + E+ ELE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISSE-TDPDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ +WK ++I S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q + +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|392427817|ref|YP_006468811.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfosporosinus
acidiphilus SJ4]
gi|391357780|gb|AFM43479.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfosporosinus
acidiphilus SJ4]
Length = 356
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 244/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + +L+ L+DPE++SN +E+QK A++ A + +V+ +R++++ ++LEE
Sbjct: 1 MLEKLYEIERKYDELTELLSDPEIISNQTEWQKYAKTQAGMTNLVTAFREYQEVLRELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E D EM EM E L N ++LEE +++LLLP DP D +N+++E+RAGAG
Sbjct: 61 TEKLLQEK-LDPEMQEMAEQERDELKNRSVQLEETMRILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL +MY +Y+E W+ ++S+S + GG+K V+ ++GN YSKLK+ESG
Sbjct: 120 GEEAALFAGDLYKMYTRYAEGQGWRTEVLSASYTDIGGYKEVIFIVEGNGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA+EVEV I+P D+ + + G GGQ VN +
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEAEEVEVSINPNDLRIDIFCASGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C +E++QL+NK +AL++LRA++ E E + ++R SQVGTG
Sbjct: 240 SAVRITHIPTGIIATCQDEKSQLKNKEKALRVLRARILEKAQEEAMGEQASERRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ RVTDHR+ + L + L G+++ +Q+ +Q E L
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHRLETILAGDMEEIIQALITSDQAERL 351
>gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus
JCSC1435]
gi|119361616|sp|Q4L7Z9.1|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus
JCSC1435]
Length = 358
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DPE+V++ + +K ++ A+L + V YR +K ++++ E
Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ EM+ E SL + + ELEE+LK LL+P DP D +++++E+RA AG
Sbjct: 61 IDEMLNETEDKEEI-EMLKEESASLKSAIPELEEQLKFLLIPKDPNDEKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E ++K ++ ++E++ GG+K + + G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +AL++L+A+LY++K++E+Q+K QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKALKVLKARLYDMKLQEEQQKYAAQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E++RTYNY +RVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 299 DRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQTEKLKEL 353
>gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
Length = 358
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|358053646|ref|ZP_09147382.1| peptide chain release factor 1 [Staphylococcus simiae CCM 7213]
gi|357256833|gb|EHJ07154.1| peptide chain release factor 1 [Staphylococcus simiae CCM 7213]
Length = 358
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 254/355 (71%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+A M+ E +L +E+ +EE+LK LL+P DP D +++++E+RA AG
Sbjct: 61 IEDMLNETDDKEEIA-MLKEESSALKDEIPSIEEELKFLLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + ++ G+ YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFQVSGHGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEGHLEEIIDALTLSEQTEKLKEL 353
>gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
15053]
gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
15053]
Length = 357
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 240/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++L +L +P+VV+N +++L + +L +V Y+++K C + +E+
Sbjct: 1 MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S L E +DEEM E+ E+ + ELE +LK+LLLP DP D +N+M+E+RAGAG
Sbjct: 61 S-LLMLEEESDEEMRELAKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y+E WK +IS SE GGFK VV I G YS+LKYESG
Sbjct: 120 GDEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTVTVAIMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ ++Q R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQASEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+ RVTDHR+K+ +L S L+G++D + S A +Q L L
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIAADQAAKLSNL 354
>gi|450092274|ref|ZP_21855899.1| peptide chain release factor 1 [Streptococcus mutans W6]
gi|450147526|ref|ZP_21875111.1| peptide chain release factor 1 [Streptococcus mutans 14D]
gi|449218621|gb|EMC18626.1| peptide chain release factor 1 [Streptococcus mutans W6]
gi|449236929|gb|EMC35828.1| peptide chain release factor 1 [Streptococcus mutans 14D]
Length = 359
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEATLFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|375091145|ref|ZP_09737443.1| peptide chain release factor 1 [Helcococcus kunzii ATCC 51366]
gi|374564316|gb|EHR35614.1| peptide chain release factor 1 [Helcococcus kunzii ATCC 51366]
Length = 358
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 242/354 (68%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE+ + +L LA+P++++N E+QK+ + +L +V Y +++ E ++E
Sbjct: 1 MFEKLENTKNKFYELEKDLANPDLIANMDEWQKVNREYVDLRPLVKAYEEYRKNEDTIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E D+EM +++ EI ++L LEEK+ LL+P DP D +N+ +E+R+GAG
Sbjct: 61 NKEML-EMAEDQEMKDLLHEEIGEAEDKLESLEEKITFLLIPKDPNDYKNVFVEIRSGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMYQ ++ N +K I SE GG K V+ +KG YSKLKYESG
Sbjct: 120 GDEAALFAGDLYRMYQMFANNNGYKTEEIEYSEQGTGGVKEVIFMVKGEGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVID-PKDIELTTARSGGAGGQNVNKV 292
VHRVQRVPQTE QGR+HTSTATVA++PEA ++++ ID ++ + RS GAGGQ+VN
Sbjct: 180 VHRVQRVPQTETQGRIHTSTATVAVLPEAGKIDIEIDESTELRIDYYRSSGAGGQHVNTT 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTGI + C +ER+Q++NK++A+ ++ AKLY+ K+ +QQ+++ R +QVGT
Sbjct: 240 DSAVRITHLPTGIVVACQDERSQIKNKAKAMNIMYAKLYDFKLEQQQKELSEDRKTQVGT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+EKIRTYN+ RVTDHR+ K ++L +FL+G+I + + +Q + LE
Sbjct: 300 GDRSEKIRTYNFPQGRVTDHRINKTIYQLDNFLNGDIQEMIDALILEDQTKKLE 353
>gi|336392692|ref|ZP_08574091.1| peptide chain release factor 1 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 363
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 235/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++L L+DPEV+S+ + KL++ E+ E Y ++KD Q+ E
Sbjct: 7 MFEQLQAVVDRHEELEGLLSDPEVISDTQRFMKLSKEEGEIRETTEKYNRYKDVVGQIAE 66
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ +E D EM M+ ++ L+ E +LE ++ +L+LP DP D +NI++E+R AG
Sbjct: 67 NDAMLREKL-DPEMDAMVKQDLAELNTEKEKLEHEMTLLMLPKDPNDDKNIIMEIRGAAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY +Y+E+ WK + + E GGFK+VV+ I G+ VYSKLK+E+G
Sbjct: 126 GDEASLFAGDLLNMYMRYAEKQGWKVETVDETPTEVGGFKSVVIMISGDSVYSKLKFENG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+QGRVHTSTATVA+MPE D V++ IDPKDI RS GAGGQ++NK
Sbjct: 186 AHRVQRVPQTESQGRVHTSTATVAVMPEYDAVDLDIDPKDIRTDVYRSSGAGGQHINKTS 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+LRA++Y+ + Q + R VGTG
Sbjct: 246 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRARVYDYYESQNQSEYDENRKQSVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G ++ + + +Q LE+L
Sbjct: 306 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEEIIDALILHDQTAKLEQL 360
>gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
N315]
gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
COL]
gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
JH9]
gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
JH1]
gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30]
gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ED98]
gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
132]
gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MR1]
gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus TCH70]
gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379015244|ref|YP_005291480.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VC40]
gi|384862770|ref|YP_005745490.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384865303|ref|YP_005750662.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|384870668|ref|YP_005753382.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
T0131]
gi|385782358|ref|YP_005758529.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
11819-97]
gi|386831700|ref|YP_006238354.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387143833|ref|YP_005732227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
TW20]
gi|387151243|ref|YP_005742807.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981]
gi|415688362|ref|ZP_11452077.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CGS01]
gi|415694101|ref|ZP_11455681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CGS03]
gi|417650314|ref|ZP_12300086.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21189]
gi|417651582|ref|ZP_12301342.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21172]
gi|417655362|ref|ZP_12305075.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21193]
gi|417795560|ref|ZP_12442780.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21305]
gi|417799464|ref|ZP_12446604.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21310]
gi|417802281|ref|ZP_12449346.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21318]
gi|417893640|ref|ZP_12537665.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21201]
gi|417898365|ref|ZP_12542286.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21259]
gi|417900254|ref|ZP_12544144.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21266]
gi|418277214|ref|ZP_12891828.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21178]
gi|418286662|ref|ZP_12899303.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21209]
gi|418313995|ref|ZP_12925477.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21334]
gi|418315861|ref|ZP_12927313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21340]
gi|418319221|ref|ZP_12930605.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21232]
gi|418320033|ref|ZP_12931397.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VCU006]
gi|418428179|ref|ZP_13001168.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418431065|ref|ZP_13003966.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418434971|ref|ZP_13006822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437738|ref|ZP_13009515.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418440666|ref|ZP_13012353.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418443642|ref|ZP_13015228.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446638|ref|ZP_13018100.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418452564|ref|ZP_13023886.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455519|ref|ZP_13026770.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418458395|ref|ZP_13029586.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418568196|ref|ZP_13132547.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21272]
gi|418569955|ref|ZP_13134257.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21283]
gi|418572731|ref|ZP_13136937.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21333]
gi|418580041|ref|ZP_13144131.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599066|ref|ZP_13162562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21343]
gi|418641146|ref|ZP_13203360.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-24]
gi|418645500|ref|ZP_13207622.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-55]
gi|418646515|ref|ZP_13208617.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-88]
gi|418649157|ref|ZP_13211187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-91]
gi|418651989|ref|ZP_13213969.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-99]
gi|418655916|ref|ZP_13217748.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-105]
gi|418660196|ref|ZP_13221834.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-111]
gi|418663232|ref|ZP_13224754.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-122]
gi|418871166|ref|ZP_13425553.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-125]
gi|418875982|ref|ZP_13430231.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418878975|ref|ZP_13433206.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881813|ref|ZP_13436025.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884444|ref|ZP_13438634.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418887148|ref|ZP_13441291.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418895713|ref|ZP_13449804.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418904457|ref|ZP_13458494.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418907050|ref|ZP_13461071.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418912668|ref|ZP_13466645.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG547]
gi|418915249|ref|ZP_13469216.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418920947|ref|ZP_13474875.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418926531|ref|ZP_13480427.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418929461|ref|ZP_13483345.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418932436|ref|ZP_13486264.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418935099|ref|ZP_13488915.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418947910|ref|ZP_13500249.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-157]
gi|418955819|ref|ZP_13507755.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-189]
gi|418989185|ref|ZP_13536853.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418992035|ref|ZP_13539693.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419773806|ref|ZP_14299793.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CO-23]
gi|419783578|ref|ZP_14309362.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-M]
gi|421150914|ref|ZP_15610565.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|422742974|ref|ZP_16796970.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745935|ref|ZP_16799870.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424771945|ref|ZP_18199061.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CM05]
gi|424786107|ref|ZP_18212900.1| Peptide chain release factor 1 [Staphylococcus aureus CN79]
gi|440707624|ref|ZP_20888315.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21282]
gi|440735480|ref|ZP_20915085.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443636447|ref|ZP_21120557.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21236]
gi|443638738|ref|ZP_21122772.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21196]
gi|448742215|ref|ZP_21724167.1| peptide chain release factor 1 [Staphylococcus aureus KT/314250]
gi|448745215|ref|ZP_21727078.1| peptide chain release factor 1 [Staphylococcus aureus KT/Y21]
gi|54039049|sp|P66019.1|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|54039050|sp|P66020.1|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|54041594|sp|P66018.1|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56749376|sp|Q6G7J2.1|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71153097|sp|Q5HE82.1|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361613|sp|Q2FF10.1|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361614|sp|Q2FWE0.1|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223609|sp|A7X4W4.1|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|172048990|sp|A6QIW2.1|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039994|sp|A6U3K3.1|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039995|sp|A5IUR3.1|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039996|sp|A8YY83.1|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
N315]
gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Mu50]
gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MW2]
gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
COL]
gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus
aureus subsp. aureus JH9]
gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
JH1]
gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30]
gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ED98]
gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
TW20]
gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981]
gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
T0131]
gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21189]
gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21172]
gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21193]
gi|334270920|gb|EGL89316.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21305]
gi|334273795|gb|EGL92134.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21310]
gi|334275026|gb|EGL93328.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21318]
gi|341848725|gb|EGS89885.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21259]
gi|341848934|gb|EGS90089.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21266]
gi|341854036|gb|EGS94910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21201]
gi|364523347|gb|AEW66097.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
11819-97]
gi|365165875|gb|EHM57623.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21209]
gi|365173692|gb|EHM64178.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21178]
gi|365228349|gb|EHM69533.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VCU006]
gi|365234609|gb|EHM75539.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21334]
gi|365240958|gb|EHM81715.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21232]
gi|365242449|gb|EHM83156.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21340]
gi|371980464|gb|EHO97672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21272]
gi|371984075|gb|EHP01202.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21333]
gi|371985160|gb|EHP02245.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21283]
gi|374363941|gb|AEZ38046.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VC40]
gi|374398116|gb|EHQ69306.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21343]
gi|375019909|gb|EHS13459.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-24]
gi|375023019|gb|EHS16485.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-55]
gi|375023071|gb|EHS16535.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-99]
gi|375030416|gb|EHS23733.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-91]
gi|375032672|gb|EHS25898.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-88]
gi|375032771|gb|EHS25992.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-111]
gi|375034494|gb|EHS27655.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-122]
gi|375035302|gb|EHS28432.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-105]
gi|375369100|gb|EHS72991.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-125]
gi|375370544|gb|EHS74349.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-189]
gi|375374092|gb|EHS77736.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-157]
gi|377692888|gb|EHT17267.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377693011|gb|EHT17388.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377693380|gb|EHT17752.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377711518|gb|EHT35749.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377713277|gb|EHT37486.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377715713|gb|EHT39900.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377721175|gb|EHT45316.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG547]
gi|377721443|gb|EHT45575.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377723877|gb|EHT47998.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377729809|gb|EHT53892.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377736653|gb|EHT60668.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377739893|gb|EHT63893.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377741382|gb|EHT65371.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377754692|gb|EHT78599.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377761506|gb|EHT85377.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377762492|gb|EHT86355.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377768408|gb|EHT92191.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377769201|gb|EHT92977.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|383364875|gb|EID42180.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-M]
gi|383972378|gb|EID88423.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CO-23]
gi|385197092|emb|CCG16737.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387716328|gb|EIK04387.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387716738|gb|EIK04787.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387723794|gb|EIK11510.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387725365|gb|EIK12983.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387728625|gb|EIK16109.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387733424|gb|EIK20608.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387734814|gb|EIK21966.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387742410|gb|EIK29228.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387743046|gb|EIK29845.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387744190|gb|EIK30961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394328998|gb|EJE55125.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|402347532|gb|EJU82559.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CM05]
gi|421955633|gb|EKU07969.1| Peptide chain release factor 1 [Staphylococcus aureus CN79]
gi|436430588|gb|ELP27948.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|436505800|gb|ELP41670.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21282]
gi|443407826|gb|ELS66364.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21236]
gi|443408774|gb|ELS67289.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21196]
gi|445547086|gb|ELY15360.1| peptide chain release factor 1 [Staphylococcus aureus KT/314250]
gi|445561486|gb|ELY17688.1| peptide chain release factor 1 [Staphylococcus aureus KT/Y21]
Length = 358
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
68-397]
gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
E1410]
gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M876]
gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
C160]
gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M899]
gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
D139]
gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
C427]
gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
C101]
gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
H19]
gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
58-424]
gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M809]
gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M1015]
gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus MN8]
gi|379021794|ref|YP_005298456.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M013]
gi|384548343|ref|YP_005737596.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ED133]
gi|384550915|ref|YP_005740167.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384866959|ref|YP_005747155.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus TCH60]
gi|387781096|ref|YP_005755894.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
LGA251]
gi|415684944|ref|ZP_11449973.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CGS00]
gi|416841469|ref|ZP_11904424.1| peptide chain release factor 1 [Staphylococcus aureus O11]
gi|416847178|ref|ZP_11906987.1| peptide chain release factor 1 [Staphylococcus aureus O46]
gi|417887778|ref|ZP_12531898.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21195]
gi|417897471|ref|ZP_12541402.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21235]
gi|417905595|ref|ZP_12549403.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21269]
gi|418562005|ref|ZP_13126474.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21262]
gi|418565053|ref|ZP_13129473.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21264]
gi|418582937|ref|ZP_13147010.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597035|ref|ZP_13160572.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21342]
gi|418602185|ref|ZP_13165597.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21345]
gi|418892633|ref|ZP_13446743.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418898705|ref|ZP_13452772.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901506|ref|ZP_13455557.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909944|ref|ZP_13463934.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG149]
gi|418918165|ref|ZP_13472118.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418923833|ref|ZP_13477744.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418952207|ref|ZP_13504246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-160]
gi|418983065|ref|ZP_13530769.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986688|ref|ZP_13534368.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|56749405|sp|Q6GEV7.1|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361615|sp|Q2YUN5.1|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
68-397]
gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
E1410]
gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M876]
gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
C101]
gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
C427]
gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
D139]
gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M899]
gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
C160]
gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
H19]
gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M1015]
gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
58-424]
gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M809]
gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus MN8]
gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ED133]
gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus JKD6159]
gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
aureus TCH60]
gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CGS00]
gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11]
gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46]
gi|341839569|gb|EGS81149.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21235]
gi|341843058|gb|EGS84290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21269]
gi|341857126|gb|EGS97949.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21195]
gi|344178198|emb|CCC88684.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
LGA251]
gi|359831103|gb|AEV79081.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
M013]
gi|371974843|gb|EHO92158.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21262]
gi|371975207|gb|EHO92506.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21264]
gi|374395820|gb|EHQ67076.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21342]
gi|374396739|gb|EHQ67965.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21345]
gi|375369571|gb|EHS73445.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
IS-160]
gi|377700742|gb|EHT25076.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377702585|gb|EHT26906.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377702692|gb|EHT27012.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377709171|gb|EHT33442.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377729636|gb|EHT53726.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377732022|gb|EHT56074.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377748433|gb|EHT72390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377749907|gb|EHT73846.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG149]
gi|377758264|gb|EHT82150.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 358
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|333394829|ref|ZP_08476648.1| peptide chain release factor 1 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 357
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 235/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++L L+DPEV+S+ + KL++ E+ E Y ++KD Q+ E
Sbjct: 1 MFEQLQAVVDRHEELEGLLSDPEVISDTQRFMKLSKEEGEIRETTEKYNRYKDVVGQIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ +E D EM M+ ++ L+ E +LE ++ +L+LP DP D +NI++E+R AG
Sbjct: 61 NDAMLREKL-DPEMDAMVKQDLAELNTEKEKLEHEMTLLMLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY +Y+E+ WK + + E GGFK+VV+ I G+ VYSKLK+E+G
Sbjct: 120 GDEASLFAGDLLNMYMRYAEKQGWKVETVDETPTEVGGFKSVVIMISGDSVYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+QGRVHTSTATVA+MPE D V++ IDPKDI RS GAGGQ++NK
Sbjct: 180 AHRVQRVPQTESQGRVHTSTATVAVMPEYDAVDLDIDPKDIRTDVYRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+LRA++Y+ + Q + R VGTG
Sbjct: 240 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRARVYDYYESQNQSEYDENRKQSVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G ++ + + +Q LE+L
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEEIIDALILHDQTAKLEQL 354
>gi|420145956|ref|ZP_14653401.1| Peptide chain release factor 1 (RF-1) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402395|gb|EJN55743.1| Peptide chain release factor 1 (RF-1) [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 360
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 235/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++L L+DPEV+S+ + KL++ E+ E Y ++KD Q+ E
Sbjct: 4 MFEQLQAVVDRHEELEGLLSDPEVISDTQRFMKLSKEEGEIRETTEKYNRYKDVVGQIAE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ +E D EM M+ ++ L+ E +LE ++ +L+LP DP D +NI++E+R AG
Sbjct: 64 NDAMLREKL-DPEMDAMVKQDLAELNTEKEKLEHEMTLLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY +Y+E+ WK + + E GGFK+VV+ I G+ VYSKLK+E+G
Sbjct: 123 GDEASLFAGDLLNMYMRYAEKQGWKVETVDETPTEVGGFKSVVIMISGDSVYSKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+QGRVHTSTATVA+MPE D V++ IDPKDI RS GAGGQ++NK
Sbjct: 183 AHRVQRVPQTESQGRVHTSTATVAVMPEYDAVDLDIDPKDIRTDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+LRA++Y+ + Q + R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILRARVYDYYESQNQSEYDENRKQSVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G ++ + + +Q LE+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEEIIDALILHDQTAKLEQL 357
>gi|436838820|ref|YP_007324036.1| peptide chain release factor 1 [Fibrella aestuarina BUZ 2]
gi|384070233|emb|CCH03443.1| peptide chain release factor 1 [Fibrella aestuarina BUZ 2]
Length = 357
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 240/356 (67%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I +LE+ + + ++ ++ PEVVS+P + KL++ ELD +V Y ++ ++E
Sbjct: 1 MIEQLEAIRERFNEVGQQIVQPEVVSDPKRFMKLSKEYKELDRIVQQYVSYQQVLAEIEN 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L DE+ E+ E++ L +LE LK +L+P DP D+RNI+LEVR G G
Sbjct: 61 ARQLIATE-KDEDFRELAKEELEQLQPRRDQLEADLKEMLIPKDPNDSRNIILEVRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGD+ RMYQ++ ++ WK +++ +E GG+K +V E++G VY K+K+ESG
Sbjct: 120 GDEAAIFAGDIFRMYQRFCDKMGWKMSIVDFTEGSSGGYKEIVAEVEGEDVYGKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGR+HTS A+VA++PEA+EV+V ++ DI T S GAGGQ+VN
Sbjct: 180 VHRVQRVPATETQGRIHTSAASVAVLPEAEEVDVDLNMNDIRKDTFCSSGAGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +ER+QL+N +AL +LR++LYEI++++ + I +QR + VG+G
Sbjct: 240 SAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKHNDAIASQRKTMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R++KIRTYNY +RVTDHR+ M + L + +DG+I + ++ E E L+E A
Sbjct: 300 DRSDKIRTYNYPQSRVTDHRIGMTVYNLPAVMDGDIGDFIEQLRIAENAERLKEGA 355
>gi|417986507|ref|ZP_12627075.1| peptide chain release factor 1 [Lactobacillus casei 32G]
gi|410525562|gb|EKQ00462.1| peptide chain release factor 1 [Lactobacillus casei 32G]
Length = 359
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLDRYEELQELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ D++M + +++ L + +LE+++KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK +I ++ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + +ER+Q +N++RA+Q+LR+++Y+ + QEK R + +GTG
Sbjct: 243 SAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEKYDQNRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 357
>gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159]
gi|449864498|ref|ZP_21778398.1| peptide chain release factor 1 [Streptococcus mutans U2B]
gi|449870495|ref|ZP_21780667.1| peptide chain release factor 1 [Streptococcus mutans 8ID3]
gi|449899642|ref|ZP_21791138.1| peptide chain release factor 1 [Streptococcus mutans R221]
gi|449984835|ref|ZP_21819306.1| peptide chain release factor 1 [Streptococcus mutans NFSM2]
gi|32171546|sp|Q8DU64.1|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans
UA159]
gi|449156403|gb|EMB59872.1| peptide chain release factor 1 [Streptococcus mutans 8ID3]
gi|449179769|gb|EMB81960.1| peptide chain release factor 1 [Streptococcus mutans NFSM2]
gi|449258137|gb|EMC55733.1| peptide chain release factor 1 [Streptococcus mutans R221]
gi|449264922|gb|EMC62255.1| peptide chain release factor 1 [Streptococcus mutans U2B]
Length = 359
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKL+ LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|402702451|ref|ZP_10850430.1| peptide chain release factor 1 [Pseudomonas fragi A22]
Length = 360
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY ++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVATYGQWLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+N D +M EM E++ L+ELE+ L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDN--DPDMREMAVEEVREAKERLLELEQDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ WK ++S + E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAERRGWKLEILSENSGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 VHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPSDLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R S VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDDVLAGGVDAVIEPLLAEFQADQLTALGE 360
>gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
Length = 355
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 245/356 (68%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLES A + ++ +L +P+ + + Y++L+Q A L + V + +K+ +EE
Sbjct: 1 MIDKLESIASRFTEIEERLGEPDTMKDMHLYKELSQEHAALKDTVEEFGHYKELLSGIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E+ +D EM EM E++ L + L + E++LK LL+P DPLD +N ++E+RAG G
Sbjct: 61 TKQLL-ESESDHEMREMAEVELEELKDHLEKSEKRLKTLLVPKDPLDGKNTIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY ++SEQ WK ++ SS+ E GGFK V+ I G VY L+YESG
Sbjct: 120 GDEASLFAADLYRMYSRFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGR+HTS TVA++PEA++ ++ I P+D+++ RS G GGQ+VN +
Sbjct: 180 VHRVQRVPSTESQGRIHTSAVTVAVLPEAEKTDIDISPEDLKIDVFRSSGPGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK++AL++LRA+LYE + +Q+++ R SQ+G+G
Sbjct: 240 SAVRVTHIPTGVVVTCQDEKSQLKNKAKALRVLRARLYEAEEMKQRKERDQARKSQIGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ NRVTDHR+ + ++L ++G ++ + + +ELL++ A
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDQVMEGALNELIDALKLSITEELLKQHA 355
>gi|418007783|ref|ZP_12647657.1| peptide chain release factor 1 [Lactobacillus casei UW4]
gi|410548165|gb|EKQ22380.1| peptide chain release factor 1 [Lactobacillus casei UW4]
Length = 359
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLDRYEELQELMSDPEVISDTKRYLSLSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ D++M + +++ L + +LE+++KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK +I ++ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + +ER+Q +N++RA+Q+LR+++Y+ + QEK R + +GTG
Sbjct: 243 SAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEKYDQNRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 357
>gi|403068628|ref|ZP_10909960.1| peptide chain release factor RF-1 [Oceanobacillus sp. Ndiop]
Length = 356
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 240/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ + L+ L+DPEV+S+ + ++ ++ + L++VV YR++KD QL +
Sbjct: 1 MLDRLQTLEDRYNKLNEMLSDPEVISDTKKLREYSKEQSGLEDVVQAYREYKDVTGQLND 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E+ D +M EM+ EI L++ ELEE++K+LLLP DP D +N+ +E+R AG
Sbjct: 61 AKEML-EDKMDADMQEMVKLEIDELTDSKQELEERMKILLLPKDPNDDKNVFMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++ +S GG+K ++ I G VYSKLKYE+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEAQGWKIEVMEASSTGVGGYKEIIFMINGKDVYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEVEIHDKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H+PTG + +E++Q++NK +A+++LRA++Y+ RE Q + R S VGTG
Sbjct: 240 SAVRLTHEPTGTVVSIQDEKSQIKNKEKAMKVLRARVYDKFQREAQAEYDENRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ NRVTDHR+ + + L + G +D + + EQ + LE + E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQIMQGKLDEFIDALIMEEQAKRLENIGE 356
>gi|392395598|ref|YP_006432200.1| peptide chain release factor 1 (bRF-1) [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390526676|gb|AFM02407.1| bacterial peptide chain release factor 1 (bRF-1)
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 355
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 241/349 (69%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL + + +L+ L+DPEV++N +E+QK A++ A + ++V +R + + K LEE+++
Sbjct: 4 KLIEIERRYDELTQLLSDPEVIANQAEWQKYAKTQAGMTDIVEAFRDYSEILKHLEETQS 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E D E EM E++ L+ + ELEEK+++LLLP DP D +N+++E+RAGAGG+E
Sbjct: 64 LLEEK-LDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL RMY KY+E W+ L+S+S + GGFK ++ I+G YSKLK+ESGVHR
Sbjct: 123 AALFAGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+ GR+HTST TVA++PEA+EV+V I+P D+ + S G GGQ+VN ++A+
Sbjct: 183 VQRVPTTESGGRIHTSTTTVAVLPEAEEVDVDINPNDLRIDIFCSSGPGGQSVNTTQSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG + C +E++QL+NK +AL++LRA+L E E ++ ++R SQVGTG R+
Sbjct: 243 RITHVPTGTVVSCQDEKSQLKNKEKALRVLRARLLERAQEEAMGELASERRSQVGTGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
E+IRTYN+ RVTDHR+ + L S L G +D + + +Q E L
Sbjct: 303 ERIRTYNFPQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQAERL 351
>gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
Length = 355
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 251/350 (71%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL T+KDL+ K++DPE++++ +QK + A+L+ ++ YR++K + E
Sbjct: 1 MLKKLGVLEDTYKDLTEKISDPEIINDQKVWQKYMKEHADLEPIIMKYREYKAVLDAIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + +E +DEE+ E+ E+ + +++ LEE+LK+LL+P DP D +N+++E+R GAG
Sbjct: 61 SKEILQEE-SDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY +Y+E+ WK +++SS+E GG+K V IKG YS+LKYESG
Sbjct: 120 GDEAALFAGDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PE ++VEV I+ DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRIPSTESGGRIHTSTATVAVLPEVEDVEVEINDNDIRIDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C +E++QL+NK +A+++L+A+LY+ + +QQ++I +R SQVGTG
Sbjct: 240 SAVRITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQKEISAERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYN+ R++DHR+ + ++L SFLDG+ID + + ++Q E
Sbjct: 300 DRSERIRTYNFPQGRISDHRINLTLYKLDSFLDGDIDEMIDALITVDQTE 349
>gi|386729808|ref|YP_006196191.1| peptide chain release factor 1 (RF-1) [Staphylococcus aureus subsp.
aureus 71193]
gi|387603397|ref|YP_005734918.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST398]
gi|404479399|ref|YP_006710829.1| peptide chain release factor 1 [Staphylococcus aureus 08BA02176]
gi|418311350|ref|ZP_12922875.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21331]
gi|418979397|ref|ZP_13527193.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Staphylococcus
aureus subsp. aureus DR10]
gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST398]
gi|365234481|gb|EHM75413.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21331]
gi|379992828|gb|EIA14278.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Staphylococcus
aureus subsp. aureus DR10]
gi|384231101|gb|AFH70348.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Staphylococcus
aureus subsp. aureus 71193]
gi|404440888|gb|AFR74081.1| peptide chain release factor 1 [Staphylococcus aureus 08BA02176]
Length = 358
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFGQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|390562364|ref|ZP_10244589.1| peptide chain release factor 1 [Nitrolancetus hollandicus Lb]
gi|390173090|emb|CCF83891.1| peptide chain release factor 1 [Nitrolancetus hollandicus Lb]
Length = 367
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 237/353 (67%), Gaps = 3/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE + +L +A P V +NP + + AE++EVV YRK ++Q+EE
Sbjct: 3 VLQKLEDIEHRYDELEHLMAQPAVATNPERLMEYGRERAEMEEVVGAYRKLHRVDEQIEE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ LA + D+E+A + +E+ L + +++ LL+P DP+D +N+++E+RAG G
Sbjct: 63 TELLAHDQ--DQELARLAQAELVELRETRQRVMSEIRQLLVPKDPMDEKNVIVEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY Y+E+N WK ++SS+E GGFK +V E++GN YS LK+ESG
Sbjct: 121 GDEAALFAADLFRMYTLYAERNRWKVEVLSSNETGIGGFKEIVFEVRGNGAYSHLKFESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PE EVEV + +D+ + RS G GGQ+VN +
Sbjct: 181 VHRVQRIPVTESGGRIHTSTATVAVLPEPKEVEVDVKDEDLRIDVYRSTGHGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK++A+ +LRA+LY+I+ + Q + R Q+G+G
Sbjct: 241 SAVRITHIPTGIVVTCQDEKSQLKNKAKAMTVLRARLYDIEQQRIQAERSGLRRGQIGSG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
RAEKIRTYN+ +RVTDHRLKM+ L L+G I+ ++ A EQ E L+
Sbjct: 301 ERAEKIRTYNFPQDRVTDHRLKMSLGNLPGVLNGEIEPFIRDLRAAEQTERLQ 353
>gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3]
gi|119361520|sp|Q3AUE2.1|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
chlorochromatii CaD3]
Length = 357
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 234/353 (66%), Gaps = 3/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + DL L+DP + ++ ++KL + + L EVV + ++ +LE
Sbjct: 1 MLDKLQAIKEKHLDLEQALSDPSLANDQERFRKLNREYSNLREVVQAFDAYQRKATELEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L +D EM + +E+ L + ELE+ LK+LLLP + D+RN+++E+RAG G
Sbjct: 61 AQHLLATE-SDTEMKALAEAEVDELQETVAELEQGLKILLLPKEEADSRNVIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++A DL RMYQ+Y+EQ W+ ++ +E+ GGFK +++EI GN V+ +KYES
Sbjct: 120 GDEASLFAADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEAQGR+HTS +VA++PEA+EV+V I D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTEAQGRIHTSAVSVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H PTGI C EER+QLQNK RA+Q+LR KLY+I++ EQQ++ R + V T
Sbjct: 240 ETAVRITHMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQQRADLRRTMVAT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELL 404
G R+ KIRTYNY +RVTDHR+ + L + G + +++ +Q E L
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGELHEVIEALIMHDQAERL 352
>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
gi|385819853|ref|YP_005856240.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei LC2W]
gi|385823050|ref|YP_005859392.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei BD-II]
gi|409997016|ref|YP_006751417.1| peptide chain release factor 1 [Lactobacillus casei W56]
gi|417980467|ref|ZP_12621147.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|417983234|ref|ZP_12623873.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|417989400|ref|ZP_12629906.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|417992673|ref|ZP_12633026.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|417996010|ref|ZP_12636295.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|418001796|ref|ZP_12641927.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|418004869|ref|ZP_12644875.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|418010581|ref|ZP_12650356.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|418012422|ref|ZP_12652138.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
gi|122263928|sp|Q03A29.1|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238693030|sp|B3WDK7.1|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei ATCC 334]
gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei LC2W]
gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei BD-II]
gi|406358028|emb|CCK22298.1| Peptide chain release factor 1 [Lactobacillus casei W56]
gi|410524790|gb|EKP99697.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|410528654|gb|EKQ03502.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|410532874|gb|EKQ07569.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|410536163|gb|EKQ10763.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|410538489|gb|EKQ13042.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|410545609|gb|EKQ19899.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|410548440|gb|EKQ22641.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|410553821|gb|EKQ27814.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|410556839|gb|EKQ30698.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
Length = 359
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLDRYEELQELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ D++M + +++ L + +LE+++KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK +I ++ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + +ER+Q +N++RA+Q+LR+++Y+ + QEK R + +GTG
Sbjct: 243 SAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEKYDQNRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 357
>gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
Length = 357
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 239/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S ++ L+ L+DPE+V++P + ++ ++ + + E V TYR++K+ ++Q ++
Sbjct: 1 MFDRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+RA+ +E D EM EM+ E+ L +LE +LK+LL+P DP D +N+++E+R AG
Sbjct: 61 ARAMLEEK-LDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S GG+K ++ I GN YSKLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG + C +E++Q++NK +A+++LRA++Y+ +E Q + QR S VGTG
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + EQ L+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIVEEQSAKLD 352
>gi|450028514|ref|ZP_21832220.1| peptide chain release factor 1 [Streptococcus mutans G123]
gi|449195599|gb|EMB96913.1| peptide chain release factor 1 [Streptococcus mutans G123]
Length = 359
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASVNGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFSQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|335041017|ref|ZP_08534135.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
gi|334179167|gb|EGL81814.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
Length = 356
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 242/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L + +++L+ L+DP V S+P + + ++ +EL+E V+ YR++KD +QL +
Sbjct: 1 MFDRLRALEDRYEELNRLLSDPAVASDPKKLRDYSKEQSELEETVTCYREYKDVVRQLTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++++ +E +DE + EM+ EI LS + LEE+LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKSMLEEKLDDE-LREMVKEEIAVLSEKKEALEERLKILLLPKDPNDEKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY +Y+E WK +I + + GG+K ++ I G YS+LKYESG
Sbjct: 120 GDEACLFAGDLYKMYTRYAEDKGWKIEVIEAHPNDLGGYKEIIFSINGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PEA+E++V ID KDI + S G GGQ+VN +
Sbjct: 180 AHRVQRVPVTESGGRIHTSTATVAVLPEAEEIDVEIDEKDIRVDVFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q +NK +A+++LRA++Y+ ++E Q + + R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQHKNKEKAMKILRARVYDKYLQEAQNEYASIRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ +RVTDHR+ + +L L+G +D + + EQ LLE
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDQVLNGELDEIIDALIVHEQTALLE 352
>gi|310779238|ref|YP_003967571.1| peptide chain release factor 1 (bRF-1) [Ilyobacter polytropus DSM
2926]
gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
polytropus DSM 2926]
Length = 357
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 244/357 (68%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE K ++L+ L EV+ +P + + +++ E+ VV Y+++K LE
Sbjct: 1 MFGKLEEVVKKHEELTGLLGSSEVIKDPKKLIEYNKALNEITPVVEKYKEYKRYSDDLEF 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ K D EM EM+ E++ + L LE++L++LLLP DP D +N+++E+R G G
Sbjct: 61 TKESLKVE-KDHEMKEMLLEEMRDIEEVLPGLEQELRILLLPKDPNDDKNVIIEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E+N WK ++S SE GG K +V I+G YSKLK+ESG
Sbjct: 120 GDEAALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSIQGQGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP+TE+ GR+HTSTATVA++PE D+VE V I P ++++ T RS GAGGQ+VN
Sbjct: 180 VHRVQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDTFRSSGAGGQHVNTT 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H P+G+ + C +ER+QL+N+ +A+++L KL+E+++ +Q+ ++ + R QVGT
Sbjct: 240 DSAVRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQRSEVESTRKLQVGT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G+R+EKIRTYNY R+TDHR+K+ +L +FLDG++ + + +Q ++L LA
Sbjct: 300 GSRSEKIRTYNYPQGRITDHRIKLTLHKLDAFLDGDLTEMIDALITFDQADMLTNLA 356
>gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
18311]
gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus
CNRZ1066]
gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9]
gi|386086429|ref|YP_006002303.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03]
gi|386344442|ref|YP_006040606.1| peptide chain release factor 1 [Streptococcus thermophilus JIM
8232]
gi|387909526|ref|YP_006339832.1| peptide chain release factor 1 [Streptococcus thermophilus
MN-ZLW-002]
gi|418028440|ref|ZP_12667005.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
thermophilus CNCM I-1630]
gi|445375304|ref|ZP_21426495.1| peptide chain release factor 1 [Streptococcus thermophilus MTCC
5460]
gi|445389791|ref|ZP_21428212.1| peptide chain release factor 1 [Streptococcus thermophilus MTCC
5461]
gi|81559540|sp|Q5M0B7.1|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|81560720|sp|Q5M4W4.1|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|122267782|sp|Q03L79.1|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
18311]
gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus
CNRZ1066]
gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus
thermophilus LMD-9]
gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03]
gi|339277903|emb|CCC19651.1| peptide chain release factor 1 [Streptococcus thermophilus JIM
8232]
gi|354687220|gb|EHE87323.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
thermophilus CNCM I-1630]
gi|387574461|gb|AFJ83167.1| peptide chain release factor 1 [Streptococcus thermophilus
MN-ZLW-002]
gi|444750279|gb|ELW75106.1| peptide chain release factor 1 [Streptococcus thermophilus MTCC
5461]
gi|444750386|gb|ELW75204.1| peptide chain release factor 1 [Streptococcus thermophilus MTCC
5460]
Length = 359
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + +L++ A E V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVIAYREYKQVIQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDADLEEMAKEELKKSKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGESVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +E+E IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEMEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +AL+++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKALKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEEL 357
>gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
12755]
gi|420262968|ref|ZP_14765608.1| peptide chain release factor 1 [Enterococcus sp. C1]
gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
12755]
gi|394769932|gb|EJF49750.1| peptide chain release factor 1 [Enterococcus sp. C1]
Length = 357
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP V+S+ + +L++ A E V YR++K+ + +++
Sbjct: 1 MYDQLQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + EN D EMAEM E+ L E LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 61 TEEMLGEN-LDAEMAEMAKEELSDLKKEKDVLEERIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K V+M I G+ V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMITGDNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ I KDI + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDIADKDIRTDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYDQMQQEAQSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D V + +Q L+E+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIVYDQTSKLDEM 354
>gi|335996956|ref|ZP_08562873.1| peptide chain release factor 1 [Lactobacillus ruminis SPM0211]
gi|335352026|gb|EGM53517.1| peptide chain release factor 1 [Lactobacillus ruminis SPM0211]
Length = 351
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 235/347 (67%), Gaps = 2/347 (0%)
Query: 62 AKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKEN 121
A +++L L+DP+V+++ + +L++ MA+L E V Y K+K +Q+++ +
Sbjct: 3 ADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVVQQIKDDEEMLS-T 61
Query: 122 GNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWA 181
G D+EMA M+ E+ NE +LE+++K+LLLP DP D +++++E+R AGGDEA ++A
Sbjct: 62 GLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEIRGAAGGDEASLFA 121
Query: 182 GDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVP 241
DL MY KY+E+ W +I + E GGFK + + I G V+SKLKYESG HRVQRVP
Sbjct: 122 ADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKLKYESGAHRVQRVP 181
Query: 242 QTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHK 301
TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK +A+ + H
Sbjct: 182 VTESAGRVHTSTATVVVMPEEEDVEIDLDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHL 241
Query: 302 PTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRT 361
PTGI + ++R+Q QN+ +A+++L+A++Y+ ++Q + R S VGTG R+E+IRT
Sbjct: 242 PTGIVVAMQDQRSQQQNREKAMKILKARVYDYYKSQEQSEYDENRKSAVGTGDRSERIRT 301
Query: 362 YNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
YNY NRVTDHR+ ++ +L ++G +D+ + + +Q + LEEL
Sbjct: 302 YNYPQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQTKALEEL 348
>gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis
MB4]
gi|22096035|sp|Q8RD98.1|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis
MB4]
Length = 356
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 250/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS K++DP V+SN E++K + A ++++V YR++K ++++
Sbjct: 1 MIEKLQAIEDRYVELSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + DEE+ EM E+ L + +L E++K+LLLP DP D +N+++E+RAGAG
Sbjct: 61 TEELL--SSQDEELKEMAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++S+++ + GGFK V+ I G YS+LKYESG
Sbjct: 119 GEEAALFAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PEA+EV+V I+P DI++ RS G GGQ+VN +
Sbjct: 179 VHRVQRIPTTEAGGRIHTSTATVAVLPEAEEVDVEINPNDIKIDVFRSSGHGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q+QN+ RAL++LRAKLYE+ ++EQQ +I R SQVGTG
Sbjct: 239 SAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALKEQQREIAEARKSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L LDG +D + + +Q E L+ +
Sbjct: 299 ERSERIRTYNFPQGRVTDHRIGLTLYKLQEVLDGELDEIIDALILNDQAEKLKNM 353
>gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
23K]
gi|119361554|sp|Q38WJ4.1|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
23K]
Length = 365
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 243/363 (66%), Gaps = 2/363 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + +L ++DPEV++ S Y +L++ A L E+V Y + K+ ++ E
Sbjct: 4 MFEQLDGLLDRYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRLKEVLSEVTE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E D EM E++ ++++ L E +LE+++K+L+LP+DP D +NI++E+R AG
Sbjct: 64 NEELLRET-TDSEMTELVKADLEELQTEKAQLEQEIKILMLPTDPNDEKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQ+Y+E +W+ +I + E GGFK V M I G VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P+TE+QGRVHTSTATVA+MPE D V+V ++ KDI + R+ GAGGQ++NK
Sbjct: 183 AHRVQRIPKTESQGRVHTSTATVAVMPEYDGVDVELEAKDIRVDVYRASGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ + Q + + R S VG+G
Sbjct: 243 SAVRMTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSEYDSSRKSAVGSG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R+E+IRTYNY NRVTDHR+ + +L ++G + + + + +Q E LE+L +
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGDVIDALILFDQTEKLEQLQDGTA 362
Query: 413 APS 415
S
Sbjct: 363 HLS 365
>gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
gi|166223527|sp|A7HI45.1|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
Length = 372
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 240/354 (67%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ + +++L+ L+DP V SN ++K+++ A L+ V R ++ + +
Sbjct: 6 VLKKLEAIEQRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYRKLVTDIGD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ AL +E D ++ EM E+ L ++ EE+LK+ L+P DP D ++++LE+RAGAG
Sbjct: 66 NEALLEEK--DPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEIRAGAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A +L+RMY +Y+E+ W+ + +S GG K V + I G+ VYS LK+ESG
Sbjct: 124 GDEAGLFAAELLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWLKFESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEAQGR+HTST TVA+MPEA+++++ + P DIE+ RS G+GGQ+VN +
Sbjct: 184 VHRVQRVPATEAQGRIHTSTVTVAVMPEAEDIDIQVSPADIEMDVFRSTGSGGQSVNTTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L HKPTGI + C +E++QL+N++ A+++LRAKLYEI++ Q+ R SQVGTG
Sbjct: 244 SAVRLTHKPTGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDAARKSQVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+EKIRTYN+ +R+TDHR+ L + +DG++ + + +C + L E
Sbjct: 304 DRSEKIRTYNFPQDRLTDHRINYTRHNLPAVMDGDVQDVIDACRTFYAAQALRE 357
>gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
Length = 358
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 252/357 (70%), Gaps = 6/357 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KL+ + +L+ +++DP+V++N +YQKL + +L E+VS YR++K ++EE
Sbjct: 4 LTKKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLSRVEE 63
Query: 114 SRALAKENGNDEE--MAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ ++ +E E +AEM E+K L+ ++E++L +LLP DP D +N+++E+RAG
Sbjct: 64 AHSIIEEEEEQEVRELAEM---ELKELTPRKEKMEDELTYMLLPEDPNDEKNVIVEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
AGGDEAG++A DL RMY +Y+E +WK +IS++ + GG+K ++ ++G VYS+LKYE
Sbjct: 121 AGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRLKYE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SGVHRVQRVP TE+ GR+HTSTATVA++PEA+EV+V IDP D+ + RS G GGQ+VN
Sbjct: 181 SGVHRVQRVPTTESGGRIHTSTATVAVLPEAEEVDVDIDPNDLRIDVYRSSGPGGQSVNT 240
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
++A+ + H+PTG+ + C +E++Q +NK+RA+++LRA+L E+ +E+Q +I R SQ+G
Sbjct: 241 TDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLKELMEKEKQAEIDEARKSQIG 300
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+G R+EKIRTYN+ RV+DHR+ + +L LDGN+D + + + + LE+L
Sbjct: 301 SGDRSEKIRTYNFPQGRVSDHRINLTIHQLNDILDGNLDLIIDNLIKEDTIKRLEKL 357
>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
Length = 361
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 254/357 (71%), Gaps = 3/357 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + LI KLE + +K + +L+ PEV+ + Y++L++ EL E+ TY+++K +
Sbjct: 1 MLKKELIDKLEKLTEKYKRIEEELSKPEVIQDVKRYRELSREHKELAELYETYQEYKRLQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L E++ L K ++E+ E+ EI+ + + + ELEEKLK+LL+P DP D++N++LE+
Sbjct: 61 RELNEAKELLK--SPEKELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVILEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA ++ DL+RMYQKY+E WK +++++++ GG+K V+ I+G YS+L
Sbjct: 119 RAGTGGEEAALFVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYSRL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQR+P TE+ GR+HTSTATVA++PEADE +V I+P+D+++ T R+ GAGGQ
Sbjct: 179 KYESGVHRVQRIPVTESGGRIHTSTATVAVLPEADEADVEINPQDLKIETFRASGAGGQY 238
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ETA+ + H PTGI + C +ER+Q QNK +AL++L AKL + R+++E+I +R
Sbjct: 239 VNTTETAVRITHTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREEIARERKE 298
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
QVGTG R+EKIRTYN+ NRVTDHR+ + ++L L+G +D + + A E +E L
Sbjct: 299 QVGTGERSEKIRTYNFPQNRVTDHRVNLTLYKLNDVLEGKLDEFIDALRAKELEERL 355
>gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
2CP-1]
gi|254790857|sp|B8JAU2.1|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 370
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 243/359 (67%), Gaps = 3/359 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M P ++ KLE+ + +++L+ L+DP V N ++K+A+ A +++ V+ R ++
Sbjct: 1 MLSPDVLKKLEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ +E + AL + D E+ E+ E+ L ++ EE+LK+ L+P DP D +++++E+
Sbjct: 61 EDVEGNEALLADK--DPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAG++A +++RMY +Y+E+ W+ L+ +S GG K + + G+ VYS L
Sbjct: 119 RAGAGGDEAGLFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TEAQGR+HTST TVA+MPEA+E++V ++P D+E+ RS G+GGQ+
Sbjct: 179 KYESGVHRVQRVPATEAQGRIHTSTVTVAVMPEAEEIDVQVNPADVEMDVFRSTGSGGQS 238
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ++A+ L HKPTGI + C +E++QL+N++ A+++LRAKL+EI+ Q+ R S
Sbjct: 239 VNTTDSAVRLTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKS 298
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
QVGTG R+EKIRTYN+ +R+TDHR+ L + +DG++ + + +C + L E
Sbjct: 299 QVGTGDRSEKIRTYNFPQDRLTDHRVNYTRHNLPAVMDGDVQDVIDACRTFYAAQALRE 357
>gi|422810574|ref|ZP_16858985.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
gi|378751464|gb|EHY62054.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
Length = 358
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 240/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ L+DP+VVS+P + L++ + + V TYR++K+ +Q+ E
Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +DE M EM E+ L E +LEE+LK+LL+P DP D +N++LE+R AG
Sbjct: 61 TKELLGEKLDDE-MREMAKEELAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E WK ++ ++ GG+K ++ + GN +S++KYE+G
Sbjct: 120 GDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVAI+PEA+EVE+ + KDI T S GAGGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+NK +A+++LRA++Y+ RE +E+ R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + +Q LE L ++
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLNDA 357
>gi|417002373|ref|ZP_11941762.1| peptide chain release factor 1 [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 358
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 237/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +E + +KDL K+ DPEV+S+ ++ K+ + L +V Y + K+ E +EE
Sbjct: 1 MFENIEHIKENYKDLEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D++M EM+ EIK L E E++K+LL+P DP D+R++++E+R GAG
Sbjct: 61 NKELINE-ADDQDMVEMLKEEIKENEKLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AGDL RMY Y+++ +K + S GG K I+G YS+ KYESG
Sbjct: 120 GDEAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PE DE++V +DP DI RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEVDELDVHVDPNDIRTDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +E++Q++NK +A+++L A++YE++ ++ ++I R SQVGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNKEIADNRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ K ++L FL+GNI + S +Q LE++ E
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIEEDQTRKLEKVGED 357
>gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
20026]
gi|416851635|ref|ZP_11908780.1| peptide chain release factor 1 [Streptococcus pseudoporcinus LQ
940-04]
gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
20026]
gi|356739124|gb|EHI64356.1| peptide chain release factor 1 [Streptococcus pseudoporcinus LQ
940-04]
Length = 359
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DPEVVS+ + +L++ A + V+ YR++K+ + + +
Sbjct: 3 IYDQLQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEASTRDTVTAYRQYKEIIQSIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDSEIEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE ++VE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIVDALIMYDQTQKLESL 357
>gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
Length = 361
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 240/363 (66%), Gaps = 20/363 (5%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
+E K +++ KL+D +V NPS+ +L++ AEL E+ +Y +++L+E
Sbjct: 7 IELFKKQLEEVEAKLSDSSIVGNPSKLMELSKRHAELKEISRSYDLLASKKQELQEW--- 63
Query: 118 AKENGNDEEMAEMIASE--------IKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVR 169
EE+ E+++ E I L E+ ++E LK LL+P D L ++I++E+R
Sbjct: 64 -------EEIKELLSPEEREEAEKNIAELQKEIEQIELNLKFLLIP-DELGGKDIIVEIR 115
Query: 170 AGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLK 229
AG GG+EA ++AGDL RMY +Y+E+NSWK + S+E + GGFK V +IKG V+ KLK
Sbjct: 116 AGTGGEEAALFAGDLFRMYTRYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLK 175
Query: 230 YESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNV 289
YESGVHRVQRVPQTE+ GR+HTSTATVA++P+A EV+V IDP ++ + T RS GAGGQ+V
Sbjct: 176 YESGVHRVQRVPQTESGGRIHTSTATVAVLPKASEVDVAIDPSELRIDTFRSSGAGGQHV 235
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N+ E+A+ + H PTGI + ER+Q QNK+RA+++LRA+LY + +Q+ + QR SQ
Sbjct: 236 NRTESAVRIVHLPTGITVTVQSERSQHQNKARAMEILRARLYSLYRSQQESTLSQQRRSQ 295
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+GTG R+EKIRTYN+ NRVTDHR+ + L LDG++D + A + LE+L
Sbjct: 296 IGTGERSEKIRTYNFPQNRVTDHRINYTTYRLQDILDGDLDELIAKLAEADINIKLEKLL 355
Query: 409 ESV 411
E +
Sbjct: 356 EEM 358
>gi|336395829|ref|ZP_08577228.1| peptide chain release factor 1 [Lactobacillus farciminis KCTC 3681]
Length = 365
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 242/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ + +++L ++DPEV+++ Y ++ A++ EVV+ ++ +K+ ++ + +
Sbjct: 4 IFEQLETLLERYQELQELMSDPEVINDTKRYMAYSKEEADMREVVAAFKHYKELKQSISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E +D EM M E++S E+ E+E ++ +L+LP DP D +NI++E+R AG
Sbjct: 64 SDEILRET-DDPEMEAMAKDELESSKKEIDEVEHQITLLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL+ MY KY+E+ W +I ++ E GG+K V + I G +VYSKLK+E+G
Sbjct: 123 GDEASLFAADLLTMYSKYAEKQGWNFDIIDETDTEVGGYKDVAVMITGTKVYSKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE DEV++ IDPKDI RS GAGGQ++NK
Sbjct: 183 AHRVQRIPSTESQGRVHTSTATVAVMPEYDEVDIDIDPKDIRTDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q + QR S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRQKAMQILKSRVYDYYESQNQSEYDEQRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G ++ + + +Q + LE++
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEEIIDALIVHDQAQKLEQI 357
>gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
Length = 365
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 249/358 (69%), Gaps = 2/358 (0%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
++LE AK +K++ L PEV+++ ++Q LA+ EL + TY ++K + +EE+
Sbjct: 7 SRLEKIAKKFKEIEENLGKPEVIADQKKFQTLAKEHKELQPIYDTYMEYKKTRQGIEEAL 66
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
+ + +EE+ E+ E K L ELE +LK LL+P DP D +N++LE+RAGAGG+
Sbjct: 67 EIIEAG-EEEELVELAKEEKKELEKRAEELEGELKKLLIPKDPNDEKNVILEIRAGAGGE 125
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA ++A DL RMY +Y+E+ WK ++S +E GG K VV I G YS+LKYESGVH
Sbjct: 126 EAALFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATISGKGAYSRLKYESGVH 185
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA 295
RVQR+P TE+ GR+HTSTATVAI+PEA+EVE+ I D+++ T RS GAGGQ+VN ++A
Sbjct: 186 RVQRIPVTESGGRIHTSTATVAILPEAEEVEIEIKESDLKIDTYRSSGAGGQHVNTTDSA 245
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+ + H PTGI + C+ ER+Q+QN+ +A+++LRA+L E+ R+Q+EK+ + R +QVG+G R
Sbjct: 246 VRITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQKEKMDSARKAQVGSGDR 305
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
+EKIRTYN+ + RVTDHR+K+ + L FLDG++D + + AA EQ + +E L + G
Sbjct: 306 SEKIRTYNFPEGRVTDHRIKLTLYNLQEFLDGDLDEMIDALAAAEQAKKIEALMDEEG 363
>gi|417998865|ref|ZP_12639079.1| peptide chain release factor 1 [Lactobacillus casei T71499]
gi|410540195|gb|EKQ14713.1| peptide chain release factor 1 [Lactobacillus casei T71499]
Length = 359
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L ++DPEV+S+ Y L++ + +VV+ Y+K+K ++E
Sbjct: 4 IFEQLDGLLDRYEELQELMSDPEVISDRKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E+ D++M + +++ L + +LE+++KVL+LP DP D +NI++E+R AG
Sbjct: 64 SEEVLRES-KDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y+E+ WK +I ++ E GG+K VV+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE DEV++ IDPKDI RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + +ER+Q +N++RA+Q+LR+++Y+ + QEK R + +GTG
Sbjct: 243 SAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQEKYDQNRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q + +E L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQAQKMESL 357
>gi|357238518|ref|ZP_09125854.1| peptide chain release factor 1 [Streptococcus ictaluri 707-05]
gi|356752240|gb|EHI69365.1| peptide chain release factor 1 [Streptococcus ictaluri 707-05]
Length = 359
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP VVS+ + L++ A + V+TYR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPSVVSDTKRFMALSKEEASTRDTVTTYRQYKAIIQSISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDAEIEEMAKEELKEAKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLSMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIVDALIMYDQTQKLESL 357
>gi|450116456|ref|ZP_21864503.1| peptide chain release factor 1 [Streptococcus mutans ST1]
gi|449226937|gb|EMC26402.1| peptide chain release factor 1 [Streptococcus mutans ST1]
Length = 359
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQIVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP DP D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MP+ +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPKVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
AK-01]
gi|226739100|sp|B8FEA2.1|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
AK-01]
Length = 355
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 233/354 (65%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE + + ++ L+DP++V + YQK + A+L +VV YR++K + LEE
Sbjct: 1 MLDRLEGVEQRFLEVESLLSDPKIVGDQKVYQKYVREHADLSKVVEAYREYKQVLEGLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L K+ D ++ ++ EI L E + LE++LK+LLLP DP D +N++LE+RAG G
Sbjct: 61 SKELLKDP--DPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL RMY +Y+E WK +S GG K + I G VYS K+ESG
Sbjct: 119 GDEAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TEAQGR+HTS TVA++PEA+EV++ IDP +I + RS GAGGQ+VN +
Sbjct: 179 THRVQRVPVTEAQGRIHTSACTVAVLPEAEEVDIQIDPSEIRVDVYRSQGAGGQHVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q +NK++A+++LRA+L + V+EQ I +R SQVG+G
Sbjct: 239 SAVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQEQNASISAERKSQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY RVTDHR+ + ++L S + G I V + E L+E
Sbjct: 299 DRSERIRTYNYPQGRVTDHRIGLTLYKLESIMAGQISEIVDALTTHYNAEALQE 352
>gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e]
gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28]
gi|386051514|ref|YP_005969505.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561]
gi|386054732|ref|YP_005972290.1| peptide chain release factor 1 [Listeria monocytogenes Finland
1998]
gi|404285037|ref|YP_006685934.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2372]
gi|405759593|ref|YP_006688869.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2479]
gi|20139329|sp|Q8Y4A8.1|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e]
gi|346425360|gb|AEO26885.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561]
gi|346647383|gb|AEO40008.1| peptide chain release factor 1 [Listeria monocytogenes Finland
1998]
gi|404234539|emb|CBY55942.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2372]
gi|404237475|emb|CBY58877.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2479]
Length = 358
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 239/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ L+DP+VVS+P + L++ + + V TYR++K+ +Q+ E
Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +DE M EM E L E +LEE+LK+LL+P DP D +N++LE+R AG
Sbjct: 61 TKELLGEKLDDE-MREMAKEEFAELQKEKTDLEERLKLLLVPKDPNDDKNVILEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E WK ++ ++ GG+K ++ + GN +S++KYE+G
Sbjct: 120 GDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVAI+PEA+EVE+ + KDI T S GAGGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+NK +A+++LRA++Y+ RE +E+ R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + +Q LE L ++
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLNDA 357
>gi|402846737|ref|ZP_10895046.1| peptide chain release factor 1 [Porphyromonas sp. oral taxon 279
str. F0450]
gi|402267429|gb|EJU16824.1| peptide chain release factor 1 [Porphyromonas sp. oral taxon 279
str. F0450]
Length = 362
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 238/356 (66%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L++++E +++++ + P+++++ + KL++ +L+ ++ +++++ ++E
Sbjct: 7 LLSRIEGLEIRFQEITSLITAPDIIADQKRFMKLSKEYRDLERILDKGKEYRNLLGNIQE 66
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
R E +D E+ M ++ + LEE++K+LL+P+DP DA+N+++E+R G G
Sbjct: 67 GRD-TLEAESDPELRAMAREMMQEAEQRIPSLEEEIKLLLIPADPEDAKNVVMEIRGGTG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY +Y E W + S SE GG+K ++ + G+ VY LKYESG
Sbjct: 126 GDEAALFAGDLYKMYVRYCEGRGWTTEVTSMSEGTAGGYKEIIFTVTGDGVYGILKYESG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE QGRVHTS A+VA++PEA+EV+VV++P DIE+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPETETQGRVHTSAASVAVLPEAEEVDVVLNPADIEMQTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKPTGI + C + RTQL N+ A+Q+LR KLY+I++ + E+I +R + V TG
Sbjct: 246 TKVQLTHKPTGIVVVCQQARTQLANRELAMQMLRTKLYDIELTKHNEEIAARRKTMVSTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+ KIRTYNY RVTDHR+ + + L++ + G I + E E ++E A
Sbjct: 306 DRSAKIRTYNYPQGRVTDHRINLTLYNLSAIMSGEIQPIIDELIIAENIERMKEAA 361
>gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
29799]
gi|150270957|gb|EDM98231.1| peptide chain release factor 1 [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 355
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 239/358 (66%), Gaps = 5/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL S ++DL +L PE +P+ KL + +EL+ +V TYR++ ++ +EE
Sbjct: 1 MLDKLRSLELHYEDLVARLNAPETYGDPALVAKLNKEQSELEPLVETYRRYIRRQQDMEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R+L +D +M E+ E E ELE+K+K+LLLP+DP D +N+++E+RAG G
Sbjct: 61 ARSLM----SDPDMKELAQEEFAQAKEEAEELEQKMKILLLPTDPNDGKNVIVEIRAGVG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A L RMY Y+E WK + S +E E GG K + ++G YS+LK+ESG
Sbjct: 117 GEEAALFANSLYRMYSMYAETRHWKVEVASLNETELGGIKEISFTVEGGGAYSRLKFESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ R+HTST TVA++PEA+EV+V I+P DIE+ RS GAGGQ++NK
Sbjct: 177 VHRVQRVPETESGDRIHTSTVTVAVLPEAEEVDVDINPADIEMQVFRSSGAGGQHINKTS 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L HKPTG+ + C +ER+Q QN+ +A+Q+LR++LYE + + + +R SQVGTG
Sbjct: 237 SAVRLIHKPTGMVVECQQERSQFQNRDKAMQILRSRLYEAEQQRVSAEWSEERRSQVGTG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R E+IRTYN+ R+TDHR+ + ++L ++G++D + S +Q E L++ E+
Sbjct: 297 MRNERIRTYNFPQGRLTDHRIGLTLYKLEDVMNGDLDEIIDSLITADQAERLKQSGEA 354
>gi|347755895|ref|YP_004863459.1| peptide chain release factor 1 [Candidatus Chloracidobacterium
thermophilum B]
gi|347588413|gb|AEP12943.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
Chloracidobacterium thermophilum B]
Length = 367
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 241/348 (69%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + + L+ +L+DPEVV++ + Y +LA+ +EL EVV +R+++ + L
Sbjct: 11 MFDKLKAIEEKYDALTAQLSDPEVVADAARYARLAKQHSELTEVVEKFREYRTIDANLTG 70
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L E +D EM + EI L + E + +L LL P DP D +N++LE+RAG G
Sbjct: 71 ARELLNET-DDAEMQALAREEIALLEKQRAECQLELARLLTPKDPNDGKNVLLEIRAGTG 129
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L+RMY +Y+E+ W+ ++ S +E GG K +M I+G RVYS+LK+ESG
Sbjct: 130 GNEASLFASELLRMYLRYAERQGWRVQILDESLSEVGGLKEGIMLIEGARVYSRLKHESG 189
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PEA+EVEV IDPKD+ + T S G GGQ+VN
Sbjct: 190 VHRVQRVPATESAGRIHTSTVTVAVLPEAEEVEVEIDPKDVRIDTFCSSGPGGQSVNTTY 249
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +E++Q++N+ +A ++LRA+L +++ ++Q E I +R +QVGTG
Sbjct: 250 SAVRLTHLPTGIVVSMQDEKSQIKNREKAFRILRARLLDLERQKQHEAIAGERRAQVGTG 309
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+K+NRVTDHR+ + +L + L+G++D+ + A Q
Sbjct: 310 ERSEKIRTYNFKENRVTDHRIGLTLHQLDTVLEGDLDSLLDPLVAHFQ 357
>gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes SF370]
gi|20139346|sp|Q99ZP5.1|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1
GAS]
Length = 359
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREETNTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESL 357
>gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
gi|417891518|ref|ZP_12535580.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21200]
gi|418283285|ref|ZP_12896036.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21202]
gi|418308964|ref|ZP_12920544.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21194]
gi|418560739|ref|ZP_13125248.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21252]
gi|418889924|ref|ZP_13444052.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418994816|ref|ZP_13542449.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG290]
gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
gi|341851935|gb|EGS92837.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21200]
gi|365167933|gb|EHM59300.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21202]
gi|365235966|gb|EHM76871.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21194]
gi|371971161|gb|EHO88568.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
21252]
gi|377741749|gb|EHT65735.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG290]
gi|377751241|gb|EHT75174.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 358
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL +EE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESSGIKAELPNIEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
gi|238689845|sp|B4UAY8.1|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
Length = 370
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 243/359 (67%), Gaps = 3/359 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M P ++ KLE+ + +++L+ L+DP V N ++K+A+ A +++ V+ R ++
Sbjct: 1 MLSPDVLKKLEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ +E + AL + D E+ E+ E+ L ++ EE+LK+ L+P DP D +++++E+
Sbjct: 61 EDVEGNEALLADK--DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAG++A +++RMY +Y+E+ W+ L+ +S GG K + + G+ VYS L
Sbjct: 119 RAGAGGDEAGLFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TEAQGR+HTST TVA+MPEA+E++V ++P D+E+ RS G+GGQ+
Sbjct: 179 KYESGVHRVQRVPATEAQGRIHTSTVTVAVMPEAEEIDVQVNPADVEMDVFRSTGSGGQS 238
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ++A+ L HKPTGI + C +E++QL+N++ A+++LRAKL+EI+ Q+ R S
Sbjct: 239 VNTTDSAVRLTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKS 298
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
QVGTG R+EKIRTYN+ +R+TDHR+ L + +DG++ + + +C + L E
Sbjct: 299 QVGTGDRSEKIRTYNFPQDRLTDHRVNYTRHNLPAVMDGDVQDVIDACRTFYAAQALRE 357
>gi|418323304|ref|ZP_12934585.1| peptide chain release factor 1 [Staphylococcus pettenkoferi VCU012]
gi|365229951|gb|EHM71075.1| peptide chain release factor 1 [Staphylococcus pettenkoferi VCU012]
Length = 359
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 250/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DPEVV++ + + ++ A+L + V YR++K ++ L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPEVVNDSDKLRAYSKEQADLQKTVDVYREYKQVKEDLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E + +E+ +M+ E +L ++ ELEE+LK LL+P DP D +N+++E+RA AG
Sbjct: 61 IDDMLRETKDKDEI-DMLKEEANNLKPQVPELEEQLKFLLIPKDPNDDKNVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY +YSE +K ++ + ++ GG+K V I+G YSKLKYE+G
Sbjct: 120 GDEAAIFAGDLLRMYSRYSETLGYKTDIVEMNASDHGGYKEVSFMIQGQGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VEV I +DI++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEVEIRNEDIKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + +E++Q++N+ +A+++L+A++Y++KV+E++EK ++R S VGTG
Sbjct: 240 SAVRITHTPTGTVVTSQDEKSQIKNREKAMKVLKARVYDMKVQEEEEKYASERKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALTLSEQTEKLKEL 354
>gi|312131222|ref|YP_003998562.1| peptide chain release factor 1 [Leadbetterella byssophila DSM
17132]
gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella
byssophila DSM 17132]
Length = 358
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 243/355 (68%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +LE + + ++S ++ PEVVS+ +++K+++ +L+++V Y +K L+E
Sbjct: 2 LIEQLEGIVERFDEVSQQITMPEVVSDMEKFKKISKEYRDLEKIVQEYNAYKLILAHLDE 61
Query: 114 SR-ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGA 172
++ LA E DEEM EM E+ LS + E EE+LK LL+P DP D+++ +LE+RAG
Sbjct: 62 AKEILATEK--DEEMREMAKLELDELSPKKEEAEERLKELLIPKDPNDSKDSILEIRAGT 119
Query: 173 GGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYES 232
GGDEA I+AGDL RMYQ+++ Q W+ T++ ++A GG+K +V+ +KG VY KLKYES
Sbjct: 120 GGDEASIFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIVVSVKGEDVYGKLKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE+QGR+HTS ATVA++PEADEV+V I+ DI T S GAGGQ+VN
Sbjct: 180 GVHRVQRVPATESQGRIHTSAATVAVLPEADEVDVQINMNDIRKDTFCSSGAGGQSVNTT 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ + H PTG+ + C +ER+Q++N +AL +LR++LYEI++ +Q E I +R S VG+
Sbjct: 240 YSAVRVTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIELAKQNESIAGERKSLVGS 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R++KIRTYNY RVTDHR+ + L ++GNI ++ E E ++E
Sbjct: 300 GDRSDKIRTYNYPQGRVTDHRIGFTVYNLPHVMEGNIGEFIEKLRLAENTEKMKE 354
>gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54]
gi|61214607|sp|Q6AJM5.1|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea
psychrophila LSv54]
Length = 357
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 240/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L K + + L KL+DPE+V++ E+QK+ + A L ++ + Y+++K + +E+
Sbjct: 2 LFDKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYKTACQDVED 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ ++G D ++ E+ +E++ L+ ++EL++ +K++LLP DP D +N LE+RAGAG
Sbjct: 62 NKAILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNTFLEIRAGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++ DL RMY +++E WK ++SS+ GGFK ++ I G +V+SKLKYESG
Sbjct: 122 GDEAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQVFSKLKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE QGR+HTS TVAI+PEA+EVE+ ID +++ RS G GGQ+VN +
Sbjct: 182 VHRVQRVPETETQGRIHTSAVTVAILPEAEEVELHIDMNELKFDVFRSSGPGGQSVNTTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q +NK +AL +LRA+L + E KI R SQVGTG
Sbjct: 242 SAVRITHLPTGLVVICQDEKSQHKNKVKALTVLRARLLDKLESEHNAKISEARRSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L + + G++D + +Q E L++L
Sbjct: 302 DRSERIRTYNFPQGRVTDHRINLTLYKLETIMGGSLDEVIYPLITHDQAEKLKDL 356
>gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
H7858]
gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064]
gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003]
gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175]
gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
gi|386009260|ref|YP_005927538.1| peptide chain release factor 1 [Listeria monocytogenes L99]
gi|386027873|ref|YP_005948649.1| peptide chain release factor RF1 [Listeria monocytogenes M7]
gi|386044845|ref|YP_005963650.1| peptide chain release factor 1 [Listeria monocytogenes 10403S]
gi|386048210|ref|YP_005966542.1| peptide chain release factor 1 [Listeria monocytogenes J0161]
gi|386733228|ref|YP_006206724.1| peptide chain release factor 1 [Listeria monocytogenes 07PF0776]
gi|404282101|ref|YP_006682999.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2755]
gi|404287914|ref|YP_006694500.1| peptide chain release factor 1 [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|404408920|ref|YP_006691635.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2376]
gi|404411786|ref|YP_006697374.1| peptide chain release factor 1 [Listeria monocytogenes SLCC5850]
gi|404414561|ref|YP_006700148.1| peptide chain release factor 1 [Listeria monocytogenes SLCC7179]
gi|405750888|ref|YP_006674354.1| peptide chain release factor 1 [Listeria monocytogenes ATCC 19117]
gi|405753751|ref|YP_006677216.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2378]
gi|405756655|ref|YP_006680119.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2540]
gi|406705278|ref|YP_006755632.1| peptide chain release factor 1 [Listeria monocytogenes L312]
gi|424715355|ref|YP_007016070.1| Peptide chain release factor 1 [Listeria monocytogenes serotype 4b
str. LL195]
gi|424824293|ref|ZP_18249306.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott
A]
gi|61214637|sp|Q71WN5.1|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790886|sp|B8DBG6.1|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|259585225|sp|C1KYW0.1|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
str. H7858]
gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99]
gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott
A]
gi|336024454|gb|AEH93591.1| peptide chain release factor RF1 [Listeria monocytogenes M7]
gi|345535201|gb|AEO04642.1| peptide chain release factor 1 [Listeria monocytogenes J0161]
gi|345538079|gb|AEO07519.1| peptide chain release factor 1 [Listeria monocytogenes 10403S]
gi|384391986|gb|AFH81056.1| peptide chain release factor 1 [Listeria monocytogenes 07PF0776]
gi|404220088|emb|CBY71452.1| peptide chain release factor 1 [Listeria monocytogenes ATCC 19117]
gi|404222951|emb|CBY74314.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2378]
gi|404225855|emb|CBY77217.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2540]
gi|404228736|emb|CBY50141.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2755]
gi|404231612|emb|CBY53016.1| peptide chain release factor 1 [Listeria monocytogenes SLCC5850]
gi|404240260|emb|CBY61661.1| peptide chain release factor 1 [Listeria monocytogenes SLCC7179]
gi|404243069|emb|CBY64469.1| peptide chain release factor 1 [Listeria monocytogenes SLCC2376]
gi|404246843|emb|CBY05068.1| peptide chain release factor 1 [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|406362308|emb|CBY68581.1| peptide chain release factor 1 [Listeria monocytogenes L312]
gi|424014539|emb|CCO65079.1| Peptide chain release factor 1 [Listeria monocytogenes serotype 4b
str. LL195]
Length = 358
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 239/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ L+DP+VVS+P + L++ + + V TYR++K+ +Q+ E
Sbjct: 1 MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +DE M EM E L E +LEE+LK+LL+P DP D +N++LE+R AG
Sbjct: 61 TKELLGEKLDDE-MREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY KY+E WK ++ ++ GG+K ++ + GN +S++KYE+G
Sbjct: 120 GDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVAI+PEA+EVE+ + KDI T S GAGGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDKDIRTDTFASTGAGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+NK +A+++LRA++Y+ RE +E+ R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKFEREAREEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + +Q LE L ++
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQTSKLEHLNDA 357
>gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str.
Jelinkova 176]
gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str.
Jelinkova 176]
Length = 359
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DPEVVS+ + +L++ A + V+TYR++K+ + + +
Sbjct: 3 IYDQLQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEANTRDTVTTYRQYKEIIQSIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D E+ EM E+K EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDAEIEEMAKEELKESKAAKENYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE ++VE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALIMYDQTQKLESL 357
>gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 363
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 242/360 (67%), Gaps = 2/360 (0%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + T++++ +++LS++L P+ ++P+ +++L + + + VV YR ++ + L
Sbjct: 2 PNMFTQMDAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHL 61
Query: 112 EESRALAKENGN-DEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
+++AL +E G D + +MI EI S ++ +LE LK+LLLP D D +N+++E+R
Sbjct: 62 AQAKALLEEPGALDPDFKQMIQQEISEKSQDVEKLENNLKILLLPKDVNDGKNVIVEIRG 121
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGG+EA ++A L+RMY Y + W+ +++ +E E GG K + + G Y++LKY
Sbjct: 122 GAGGEEAALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKY 181
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP+TE QGR+HTSTATVA+MP+A+EV+ +D KD+ + T RS GAGGQ++N
Sbjct: 182 ESGVHRVQRVPETETQGRIHTSTATVAVMPQAEEVDFALDMKDLRIDTFRSSGAGGQHIN 241
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K +AI + H PTG+ + C ER+Q QNK +AL++LR++L K ++QQ+ I R QV
Sbjct: 242 KTSSAIRVTHLPTGMVVECQNERSQFQNKDKALEILRSRLLAQKQKQQQDAINASRQGQV 301
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
GTG R+EKIRTYN+ +R TDHR+ + L+ +DGN+D + + A EQ E L++L E
Sbjct: 302 GTGDRSEKIRTYNFPQDRCTDHRIGLTVHNLSKIMDGNLDEVIDALATREQAEKLQKLNE 361
>gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394]
gi|61214586|sp|Q5XC69.1|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes
MGAS10394]
Length = 359
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G ++ + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMNEVIDALVMYDQTKKLESL 357
>gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254790897|sp|B9DMD1.1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 358
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 252/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VVS+ ++ ++ ++ ++L + V YR++K ++ ++E
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E + EE+ +M+ +++ L + L LEE+LK+LL+P DP D +N+++E+RA AG
Sbjct: 61 IVEMLSETSDKEEV-DMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVVVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY ++SE +K +I ++++ GGFK + I G YSKLKYE+G
Sbjct: 120 GDEAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA++VEV I D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEDVEVDIKDADLKIETYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I + E++Q+QN+ +AL++L+A++Y++K++E+QEK ++R S VGTG
Sbjct: 240 SAVRITHLPTGI-IATSSEKSQIQNREKALKVLKARVYDMKLQEEQEKYDSERKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + + L ++G +D + + EQ E L+EL
Sbjct: 299 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALTMSEQTEKLKEL 353
>gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
Length = 360
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 242/358 (67%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L++KLE +++S L D +V+S+ ++++ L++ ++LDEVV + ++ C+ L E
Sbjct: 5 LVSKLEQLRDRHEEVSAMLGDADVISDQNQFRDLSKEFSQLDEVVRVFEAYQRCQSDLSE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + K++ D EM M E+ + EL +EEKL++LLLP DP D++N+ LE+RAG G
Sbjct: 65 AREMLKDS--DPEMQSMARDELDAGEPELAAMEEKLQLLLLPRDPRDSQNVYLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMYQ+YSE W+ +IS E GGFK ++ I+G+ +Y+ LK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRIQGDDIYAHLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVAI+PE D VE + I+ D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDTFRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H P+GI + C +ER+Q +N++RA+ LL+AKL ++ + +R + VGT
Sbjct: 243 DSAVRITHLPSGIVVECQDERSQHKNRARAMSLLQAKLASASEQQAAAEQAEERRNLVGT 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+++IRTYN+ RV+DHR+ + ++L ++G++D +Q Q +LL LA+
Sbjct: 303 GDRSDRIRTYNFPQGRVSDHRINLTLYKLDEVIEGDLDALIQPLRREYQADLLAALAD 360
>gi|336054419|ref|YP_004562706.1| peptide chain release factor 1 [Lactobacillus kefiranofaciens ZW3]
gi|333957796|gb|AEG40604.1| Peptide chain release factor 1 [Lactobacillus kefiranofaciens ZW3]
Length = 362
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 251/357 (70%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE +++L +ADPEV+++ Y ++++ A+L EVV Y+K+K +K++ +
Sbjct: 4 VMAQLEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKADKKEIAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N +D ++ E+ E + E+ +LE+++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIIA-NESDNDLIEIAKEENAEIEKEIPKLEDEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY+KY+E+ +WK ++I S E GG+K V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ IDPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q K +R + VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESKNQAKYDAKRKNAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + Q + LEELA+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQTKQLEELAD 359
>gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341]
gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341]
Length = 362
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 243/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + ++ L+ L+DP+VVS+ + + ++ +++ V+ +R++KD +Q+++
Sbjct: 3 IFGQLEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E D+EM EM+ EIK L L +EE+LK+LLLP DP D +N+++EVR AG
Sbjct: 63 TKELL-EIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY +++E WK ++ SE GG K V+ I G VYSK+K+ESG
Sbjct: 122 GDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATV ++PEA+E+E+ I+ DI + T S GAGGQ+VN
Sbjct: 182 AHRVQRVPTTESSGRIHTSTATVVVLPEAEEIEIDINENDIRVDTFASSGAGGQSVNTTM 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + +ER+Q++NK +A+++LRA++Y+ +E+Q K +R S+VGTG
Sbjct: 242 SAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + + L ++G +D +++ EQ E + EL
Sbjct: 302 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAEL 356
>gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8]
gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8]
Length = 359
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/349 (42%), Positives = 236/349 (67%), Gaps = 2/349 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL + + +++ +L PEVV++ Y +L +L +V +++ + + +E
Sbjct: 1 MFDKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYRDLQPIVEKLKEYDKAKAEFDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + + G D++M EM+ + + +LE+ LK+LLLP DP D RN+++E+R GAG
Sbjct: 61 AVEMMNDGGLDKDMKEMVQEQYDESKTAMAQLEDDLKILLLPKDPNDDRNVIIEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A L RMY Y+ Q W+ ++S++E E GG+K + + G YS+LKYESG
Sbjct: 121 GEEAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTVSGQGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVID-PKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP+TE+QGRVHTST TVA++PEA+EVE+ ++ +DI++ RS GAGGQ++NK
Sbjct: 181 VHRVQRVPETESQGRVHTSTVTVAVLPEAEEVELDLNEERDIKMEVFRSSGAGGQHINKT 240
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
+A+ L H PTG + C ER+Q QN+ +AL++LRAKL + KVR Q+ +I + R SQVGT
Sbjct: 241 SSAVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKLLDEKVRAQENEIASNRRSQVGT 300
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
G R+EKIRTYN+ ++R++DHR+K+ ++L L+GN+D + + A +Q
Sbjct: 301 GDRSEKIRTYNFPESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349
>gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125]
gi|20139353|sp|Q9K6F4.1|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans
C-125]
Length = 356
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S + ++ L+ L+DPEV+S+ ++ ++ ++ A+++E V YR++K Q ++
Sbjct: 1 MFERLQSLDERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E+ D+EM M+ EI L+ +LE KLKVLLLP DP D +N+++EVR AG
Sbjct: 61 AKEML-EDKLDDEMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL +MY +Y+E WK +I +S E GG+K ++ + G YSKLKYE+G
Sbjct: 120 GDEAQLFAADLYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+ GR+HTSTATVA++PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPQTESGGRIHTSTATVAVLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ +RVTDHR+ + + L L G +D ++S EQ EL+++
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLQKLEQILQGKLDEIIESLIVHEQAELMKQ 353
>gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
gi|254790866|sp|C0Z828.1|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
Length = 358
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 247/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ T+L + + +++++ L DP+V+S+ ++L++ + L+E V+TYR++K Q+++
Sbjct: 1 MFTRLSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E +DE M EM+ E+ LS +LE++LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKAMLEEKLDDE-MREMVKLELNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY +++E+N++K ++ +S + GG+K +V + G YSK+K+ESG
Sbjct: 120 GDEAALFAAVLFRMYTRFAERNAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTSTATV ++PEA++VEV + KDI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPATESGGRIHTSTATVLVLPEAEDVEVEVHEKDIRIDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q NK +AL++LRA+LY+ +++Q + R S VGTG
Sbjct: 240 SAVRVTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLYDFYMQQQNAEADATRKSLVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY +RVTDHR+ + L S L+G +D + + EQ ELL+ A S
Sbjct: 300 DRSERIRTYNYPQSRVTDHRIGLTLHRLESVLEGEMDEVIDNLIMHEQTELLKSHAHS 357
>gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
gi|259585222|sp|C4KYV2.1|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
Length = 356
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 241/354 (68%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L + L+ LADPEV+S+ ++ ++ ++ A+L+E V YR++K+ + +E
Sbjct: 1 MFDRLSVLEDRYMQLNEMLADPEVLSDSTKLRQYSKEQAQLEETVQMYRQYKETSQAFKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++++ ++ D EM E+ E+ L E+ ELE KL++LLLP DP D +N+++EVR AG
Sbjct: 61 AKSMLEDRTLDAEMRELAKEEMNLLEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY +++E+ +WK LI ++ E GGFK V I G YSKLK+E+G
Sbjct: 121 GDEAALFAGDLYKMYTRFAERQNWKVELIDANYTELGGFKEVTFMINGAGAYSKLKFENG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PEA++VEV ID KD+ + T S G GGQ+VN +
Sbjct: 181 AHRVQRVPSTESGGRIHTSTATVAVLPEAEDVEVHIDMKDVRVDTFTSSGPGGQSVNTTQ 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H P+G+ + C +E++Q +NK +A+++LRA+LY+ E E++ QR S VGTG
Sbjct: 241 SAVRLTHIPSGLVVSCQDEKSQHKNKDKAMKVLRARLYDKMQSEHMEELSAQRKSAVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ +RVTDHR+ + + L L G +++ + + EQ L+E+
Sbjct: 301 DRSERIRTYNFPQSRVTDHRIGLTLQKLDRVLAGELEDIIDALIMDEQARLMED 354
>gi|406658418|ref|ZP_11066558.1| peptide chain release factor RF1 [Streptococcus iniae 9117]
gi|405578633|gb|EKB52747.1| peptide chain release factor RF1 [Streptococcus iniae 9117]
Length = 359
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DP+VVS+ + L++ A E V+TYR++K + + +
Sbjct: 3 IYDQLQSVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTTYREYKAIIQAISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E +W+ ++ +S GG K V+ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKFAESQNWRFEVMEASYNGVGGIKEVIAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE ++VE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALIMYDQTQKLESL 357
>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
gi|229470352|sp|B1JEP6.1|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
Length = 360
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 240/358 (67%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ +++L+ L D EV+S+ + ++ ++ +E++ V+ Y++++ + LE
Sbjct: 5 LLNKLDTLQDRFEELTALLGDAEVISDQARFRAYSREYSEVEPVIGAYKEWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+ D +M EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDA--DPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|398848323|ref|ZP_10605144.1| peptide chain release factor 1 [Pseudomonas sp. GM84]
gi|398248763|gb|EJN34164.1| peptide chain release factor 1 [Pseudomonas sp. GM84]
Length = 360
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 240/358 (67%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ +++L+ L D EV+S+ + ++ ++ AE++ V++ Y+ ++ + LE
Sbjct: 5 LLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIAAYQDWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDA--DPDLREMAVEEVRDAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|332295519|ref|YP_004437442.1| peptide chain release factor 1 [Thermodesulfobium narugense DSM
14796]
gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
14796]
Length = 361
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 238/345 (68%), Gaps = 3/345 (0%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGND 124
+K+++ L+ E+++NPS+ L+Q AEL+EVV+ Y + + L + + L +N D
Sbjct: 17 YKEINELLSSLEIINNPSKLISLSQEKAELEEVVNNYNELNKLKNYLSDLKEL--KNSED 74
Query: 125 EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
EE+ + E + + + LE KL +LP DPLD +NI+LE+RAGAGG+EA ++A +L
Sbjct: 75 EEIKALAEEEFQVVEKNIENLESKLLNFILPKDPLDEKNIILEIRAGAGGEEAALFASEL 134
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
+RMY +Y+E+ + K ++S +E GG K ++ IKG R+YS+LK+ESG HRVQRVP+TE
Sbjct: 135 LRMYLRYAERKNAKTEILSINETGIGGIKEAIISIKGKRIYSRLKFESGTHRVQRVPETE 194
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
+ GR+HTSTATVA++PEADE+++ ID KD+++ T R+GGAGGQ+VNK ++A+ + H PTG
Sbjct: 195 SGGRIHTSTATVAVLPEADEIDITIDEKDLKIDTFRAGGAGGQHVNKTDSAVRITHLPTG 254
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
I + C +ER+Q QNK +A+++L AK+ E K +++I R QVG+G R+EKIRTYN+
Sbjct: 255 IVVACQDERSQFQNKEKAMRILAAKILEEKRVASEKEIAMSRRIQVGSGDRSEKIRTYNF 314
Query: 365 KDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
RVTDHR+ + + L LDG++D + + A E LE L+
Sbjct: 315 PQGRVTDHRINLTLYRLNEVLDGDLDEIIDALIAAENIRKLELLS 359
>gi|418449724|ref|ZP_13021096.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387735105|gb|EIK22244.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
VRS9]
Length = 358
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 251/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +R TDHR+ + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRATDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337181|ref|YP_005174956.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122270927|sp|Q03VA1.1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|356645147|gb|AET30990.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 356
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 235/355 (66%), Gaps = 5/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L++ + +L+ +LADPEV++N Y KL++ E+ + V Y ++K + +++
Sbjct: 4 IFQSLQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L D EMA + ++ +L E +LEE+LK+L+LP DP D +NI++E+R AG
Sbjct: 64 AEELL----GDAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ +W ++I S E GG+K V + I G+ VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E++ ++ D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPATETQGRVHTSTATVGVMPEFEEIDFELNESDLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + + QR S VGTG
Sbjct: 240 TAVRLIHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESEYAAQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G + + + +Q L EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQTAKLAEL 354
>gi|374849774|dbj|BAL52780.1| peptide chain release factor RF-1 [uncultured Acidobacteria
bacterium]
Length = 360
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 243/351 (69%), Gaps = 2/351 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL ++L +LADPEV+ + Y KL + EL+ +++ YR+++ ++ E++RA
Sbjct: 6 KLRGIVAKSEELGHQLADPEVLLDHERYVKLLKQQRELEPIIAKYREYERLRREWEDARA 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +E D E+ E+ +E+ +L L E++LK+LLLP DP D RN++LEVRAG GG E
Sbjct: 66 LLEEE-TDGELRELARAEMHALEERLQRCEQELKLLLLPKDPNDERNVILEVRAGTGGAE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL+RMY +Y+E+ W+ L+ SE++ GG K ++ I+G YS+LK+ESGVHR
Sbjct: 125 ATLFAADLLRMYTRYAERQGWRVQLLDVSESDIGGVKEAILLIEGRGAYSRLKFESGVHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS ATVA++PEA+EVEV IDPKD+ + T S G GGQ+VN +A+
Sbjct: 185 VQRVPITEASGRIHTSAATVAVLPEAEEVEVRIDPKDLRIDTFCSSGHGGQSVNTTYSAV 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +ER+Q++N+ RAL++LR++L E++ R Q E + +R QV +G R+
Sbjct: 245 RITHLPTGLVVTCQDERSQIKNRERALRVLRSRLLELERRRQHEAVSAERRQQVKSGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
EKIRTYN+K+NRVTDHR+ + ++L LDG +D +++ Q E L+E
Sbjct: 305 EKIRTYNFKENRVTDHRIGLTLYQLDRILDGELDELIEALITHHQAEKLKE 355
>gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
Length = 358
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 247/359 (68%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L +L +P V + + ++KL + A+L ++V TY ++K ++ +E+
Sbjct: 1 MFDKLDDILIHYEELMQELNNPSVTEDQNRFRKLMKEQADLADLVETYTQYKKAKQTVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E + EEM EM E+ ++ LE++LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLALLEEESD-EEMREMAKEELSEAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y+E + WK LIS +E GGFK VV I G YSK+KYESG
Sbjct: 120 GDEAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMITGKGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+E +VVI+ KD+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEEFDVVIEDKDVRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY+I++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQNSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + S A +Q L +L E +
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDSLIAADQAVRLSKLNEEM 358
>gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
Length = 357
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 236/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ A +++L L+DP VVS+ + +L++ A E V+TYR++K+ + + +
Sbjct: 1 MYDQLQAIADRYEELGELLSDPAVVSDTKRFMELSKEEANTRETVATYRRYKEVVQGIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L EN D EMAE+ E+ L E LE+ +K+LLLP DP D +NI++E+R AG
Sbjct: 61 AEELLGEN-LDAEMAELAKEELSDLKKEKEVLEDTIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQ+Y+E W+ ++ ++ GG+K V+M I G+ V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMITGDNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVELDLADKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQLQHEAQSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEEL
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEL 354
>gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583]
gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1]
gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2]
gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3]
gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8]
gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6]
gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG]
gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11]
gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712]
gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613]
gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
gi|384513899|ref|YP_005708992.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF]
gi|384519361|ref|YP_005706666.1| peptide chain release factor 1 [Enterococcus faecalis 62]
gi|397700694|ref|YP_006538482.1| peptide chain release factor 1 [Enterococcus faecalis D32]
gi|422685002|ref|ZP_16743227.1| peptide chain release factor 1 [Enterococcus faecalis TX4000]
gi|422687782|ref|ZP_16745953.1| peptide chain release factor 1 [Enterococcus faecalis TX0630]
gi|422693343|ref|ZP_16751357.1| peptide chain release factor 1 [Enterococcus faecalis TX0031]
gi|422693857|ref|ZP_16751862.1| peptide chain release factor 1 [Enterococcus faecalis TX4244]
gi|422698999|ref|ZP_16756874.1| peptide chain release factor 1 [Enterococcus faecalis TX1346]
gi|422701250|ref|ZP_16759091.1| peptide chain release factor 1 [Enterococcus faecalis TX1342]
gi|422709733|ref|ZP_16767079.1| peptide chain release factor 1 [Enterococcus faecalis TX0027]
gi|422714146|ref|ZP_16770882.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A]
gi|422717026|ref|ZP_16773723.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B]
gi|422719970|ref|ZP_16776593.1| peptide chain release factor 1 [Enterococcus faecalis TX0017]
gi|422724655|ref|ZP_16781131.1| peptide chain release factor 1 [Enterococcus faecalis TX2137]
gi|422725862|ref|ZP_16782319.1| peptide chain release factor 1 [Enterococcus faecalis TX0312]
gi|422729458|ref|ZP_16785859.1| peptide chain release factor 1 [Enterococcus faecalis TX0012]
gi|422732208|ref|ZP_16788548.1| peptide chain release factor 1 [Enterococcus faecalis TX0645]
gi|422734544|ref|ZP_16790832.1| peptide chain release factor 1 [Enterococcus faecalis TX1341]
gi|422741614|ref|ZP_16795639.1| peptide chain release factor 1 [Enterococcus faecalis TX2141]
gi|422866786|ref|ZP_16913397.1| peptide chain release factor 1 [Enterococcus faecalis TX1467]
gi|424672248|ref|ZP_18109229.1| peptide chain release factor 1 [Enterococcus faecalis 599]
gi|424677533|ref|ZP_18114384.1| peptide chain release factor 1 [Enterococcus faecalis ERV103]
gi|424680472|ref|ZP_18117279.1| peptide chain release factor 1 [Enterococcus faecalis ERV116]
gi|424684929|ref|ZP_18121638.1| peptide chain release factor 1 [Enterococcus faecalis ERV129]
gi|424687633|ref|ZP_18124269.1| peptide chain release factor 1 [Enterococcus faecalis ERV25]
gi|424690941|ref|ZP_18127470.1| peptide chain release factor 1 [Enterococcus faecalis ERV31]
gi|424693917|ref|ZP_18130329.1| peptide chain release factor 1 [Enterococcus faecalis ERV37]
gi|424698657|ref|ZP_18134940.1| peptide chain release factor 1 [Enterococcus faecalis ERV41]
gi|424701120|ref|ZP_18137296.1| peptide chain release factor 1 [Enterococcus faecalis ERV62]
gi|424705493|ref|ZP_18141545.1| peptide chain release factor 1 [Enterococcus faecalis ERV63]
gi|424706559|ref|ZP_18142562.1| peptide chain release factor 1 [Enterococcus faecalis ERV65]
gi|424715827|ref|ZP_18145150.1| peptide chain release factor 1 [Enterococcus faecalis ERV68]
gi|424719512|ref|ZP_18148659.1| peptide chain release factor 1 [Enterococcus faecalis ERV72]
gi|424723754|ref|ZP_18152708.1| peptide chain release factor 1 [Enterococcus faecalis ERV73]
gi|424728297|ref|ZP_18156909.1| peptide chain release factor 1 [Enterococcus faecalis ERV81]
gi|424734938|ref|ZP_18163419.1| peptide chain release factor 1 [Enterococcus faecalis ERV85]
gi|424751008|ref|ZP_18179063.1| peptide chain release factor 1 [Enterococcus faecalis ERV93]
gi|428767714|ref|YP_007153825.1| peptide chain release factor 1 [Enterococcus faecalis str.
Symbioflor 1]
gi|430356851|ref|ZP_19425118.1| peptide chain release factor [Enterococcus faecalis OG1X]
gi|430368329|ref|ZP_19428153.1| peptide chain release factor [Enterococcus faecalis M7]
gi|46576782|sp|Q831F6.1|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583]
gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1]
gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2]
gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3]
gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8]
gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6]
gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG]
gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11]
gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712]
gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613]
gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp.
7L76]
gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137]
gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000]
gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017]
gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027]
gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141]
gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244]
gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012]
gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031]
gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312]
gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645]
gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341]
gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342]
gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346]
gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B]
gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630]
gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A]
gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62]
gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF]
gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467]
gi|397337333|gb|AFO45005.1| peptide chain release factor 1 [Enterococcus faecalis D32]
gi|402354029|gb|EJU88844.1| peptide chain release factor 1 [Enterococcus faecalis ERV103]
gi|402354408|gb|EJU89217.1| peptide chain release factor 1 [Enterococcus faecalis ERV116]
gi|402357293|gb|EJU92007.1| peptide chain release factor 1 [Enterococcus faecalis 599]
gi|402360169|gb|EJU94777.1| peptide chain release factor 1 [Enterococcus faecalis ERV129]
gi|402363312|gb|EJU97804.1| peptide chain release factor 1 [Enterococcus faecalis ERV31]
gi|402363916|gb|EJU98373.1| peptide chain release factor 1 [Enterococcus faecalis ERV25]
gi|402371625|gb|EJV05775.1| peptide chain release factor 1 [Enterococcus faecalis ERV41]
gi|402372333|gb|EJV06454.1| peptide chain release factor 1 [Enterococcus faecalis ERV62]
gi|402372525|gb|EJV06643.1| peptide chain release factor 1 [Enterococcus faecalis ERV37]
gi|402379234|gb|EJV13050.1| peptide chain release factor 1 [Enterococcus faecalis ERV63]
gi|402387721|gb|EJV21194.1| peptide chain release factor 1 [Enterococcus faecalis ERV65]
gi|402389352|gb|EJV22750.1| peptide chain release factor 1 [Enterococcus faecalis ERV68]
gi|402394312|gb|EJV27493.1| peptide chain release factor 1 [Enterococcus faecalis ERV81]
gi|402396423|gb|EJV29486.1| peptide chain release factor 1 [Enterococcus faecalis ERV72]
gi|402397122|gb|EJV30157.1| peptide chain release factor 1 [Enterococcus faecalis ERV73]
gi|402405601|gb|EJV38191.1| peptide chain release factor 1 [Enterococcus faecalis ERV85]
gi|402406071|gb|EJV38640.1| peptide chain release factor 1 [Enterococcus faecalis ERV93]
gi|427185887|emb|CCO73111.1| peptide chain release factor 1 [Enterococcus faecalis str.
Symbioflor 1]
gi|429514062|gb|ELA03618.1| peptide chain release factor [Enterococcus faecalis OG1X]
gi|429516359|gb|ELA05852.1| peptide chain release factor [Enterococcus faecalis M7]
Length = 357
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DP V+S+ + +L++ A E V YR++K + + +
Sbjct: 1 MYDQLQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L EN D EMAEM E+ L E LE+++K+LLLP DP D +NI++E+R AG
Sbjct: 61 AEELLSEN-LDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K V+M I G+ V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEE+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354
>gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
Length = 362
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 243/360 (67%), Gaps = 4/360 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE + KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K
Sbjct: 3 MAE--IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVT 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ + + L +E+ +D ++ E+ E+ S ++ +LE++L++LL+P DP D +NI++E+
Sbjct: 61 QTISDDEELLRES-DDPDLTELTKDELSSAKDQQAKLEKELEILLIPKDPNDDKNIIMEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
R AGGDEA ++A DL MY Y+E WK ++ SE E GGFK + + I G++VYSKL
Sbjct: 120 RGAAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVYSKL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+G HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+
Sbjct: 180 KFENGAHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQH 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNK +A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q +R
Sbjct: 240 VNKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQSAYDAKRKD 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+GTG R+E+IRTYNY NRVTDHR+ + +L + G++D +++ +Q + LE+L
Sbjct: 300 AIGTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALIVADQTKKLEQL 359
>gi|408424067|emb|CCJ11478.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408426056|emb|CCJ13443.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408428044|emb|CCJ15407.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408430033|emb|CCJ27198.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408432020|emb|CCJ19335.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408434014|emb|CCJ21299.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408436007|emb|CCJ23267.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408437990|emb|CCJ25233.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
ST228]
Length = 358
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 251/355 (70%), Gaps = 3/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + ++ L+ L+DP+VV++ + +K ++ A+L + V YR +K +++L +
Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +D+E EM+ E + EL LEE+LK+LL+P DP D +++++E+RA AG
Sbjct: 61 IEEMLSET-DDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY KY+E +K ++ +SE++ GG+K + + GN YSKLK+E+G
Sbjct: 120 GDEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PE ++VE+ I +D+++ T RS GAGGQ+VN +
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ I + E++Q+QN+ +A+++L+A+LY++KV+E+Q+K +QR S VGTG
Sbjct: 240 SAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYASQRKSAVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY +RVTDH + + + L ++G+++ + + EQ + L+EL
Sbjct: 299 DRSERIRTYNYPQSRVTDHHIGLTLQKLGQIMEGHLEEIIDALTLSEQTDKLKEL 353
>gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
gi|422703596|ref|ZP_16761416.1| peptide chain release factor 1 [Enterococcus faecalis TX1302]
gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302]
Length = 357
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DP V+S+ + +L++ A E V YR++K + + +
Sbjct: 1 MYDQLQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L EN D EMAEM E+ L E LE+++K+LLLP DP D +NI++E+R AG
Sbjct: 61 AEELLSEN-LDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K V+M I G+ V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEE+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354
>gi|399023428|ref|ZP_10725488.1| peptide chain release factor 1 [Chryseobacterium sp. CF314]
gi|398082928|gb|EJL73664.1| peptide chain release factor 1 [Chryseobacterium sp. CF314]
Length = 361
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 239/350 (68%), Gaps = 3/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KLE+ + + +++ + P+V+S+ +Y L + ++L ++V Y ++K +EE
Sbjct: 5 LIPKLEAIKQRYNEVADLIIQPDVISDQKKYSSLNKEYSDLGKIVRVYDQYKGALDTIEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +G+D ++ ++ E ++ LEE+LKVLL+P DP D +NI++E+RAG G
Sbjct: 65 SDEIIA-DGSDRDLVDLAKMEKMEAQEKIPGLEEELKVLLIPKDPADDKNIIVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+ D+ RMY Y + W+ + S+EA KG +K ++M+++G VY +K+ESG
Sbjct: 124 GDEAAIFVEDIYRMYTMYFKTKGWRHEVTDSNEAAKG-YKELIMKVEGEGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS T+A++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITIAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+G+ + C + R+QL N+ A+++LRAKLY+IK++E Q I QR + V TG
Sbjct: 243 TKVQLTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVQGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKE 402
R+ KI+TYNY RVTDHR+ K + L ++++G+I + + E E
Sbjct: 303 DRSAKIKTYNYPQGRVTDHRINKSMYNLDAYMNGDISEMIDAVIMAENAE 352
>gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 355
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 242/343 (70%), Gaps = 2/343 (0%)
Query: 67 DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEE 126
+L L+ EV+++ YQ+ A AE++ +V+ YR +K+ L E++ L KE +D+
Sbjct: 14 ELEKDLSSVEVINDSKLYQQKAIEHAEIEPIVTKYRAYKETLNSLNENKELIKEKLDDD- 72
Query: 127 MAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVR 186
+++ EI + ++ ELE +LK+LL+P D D++N+M+E+RAGAGGDEA ++AG L R
Sbjct: 73 FKDLVREEINEATKKVEELENELKILLIPKDKNDSKNVMVEIRAGAGGDEAALFAGVLYR 132
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQ 246
Y +Y+E++ ++ ISS+E GG+K +V I GN YS+LKYESGVHRVQRVP+TE+
Sbjct: 133 QYVRYAERSGFRVETISSNEIGIGGYKEIVFMIIGNGAYSRLKYESGVHRVQRVPETESG 192
Query: 247 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 306
GR+HTSTATVA++PEA++V++ IDP I+ R+ G GGQ VN ++A+ L H PTGI
Sbjct: 193 GRIHTSTATVAVLPEAEDVDIEIDPTQIKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIV 252
Query: 307 IFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKD 366
I C +E++QL+NK +A++LLR+KLY++K++EQ EK +R SQ+GTG R+E+IRTYNY
Sbjct: 253 ISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQSEKESMERSSQIGTGDRSERIRTYNYPQ 312
Query: 367 NRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
RVTDHR+ + + + + DG++D + + +Q + +E+++
Sbjct: 313 GRVTDHRINLTSHRIDAINDGDLDEIIDALITYDQTQKIEKIS 355
>gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
Length = 358
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 239/357 (66%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE K ++++ L PEVVS+ S+Y+KL L+ + Y F+ E+ EE
Sbjct: 1 MFENLEEVKKHYEEIMHNLTIPEVVSDISQYKKLILEQTSLEPIYKAYLAFRKAEQSEEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +L +N D+E+ EM E++ + L +++++LLLP D D +NI++E+R GAG
Sbjct: 61 ALSLL-DNEKDKEILEMAKEELQQAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+E+ WK L+S +E GG K VV + G+ YS+LKYESG
Sbjct: 120 GEEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPE ++V+V I+P D+ + RS GAGGQ++NK
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEVEDVQVEINPADVRMEVFRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H+PTG+ C EER+Q+QN+ +A++LLRA+LYEI++ +QQ + ++ SQ+GTG
Sbjct: 240 SAVRLIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQSENAAEKRSQLGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ + + + L G++D + +Q E L L E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYNIDAVLSGDLDLLIDPLITEDQAEKLARLEE 356
>gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 361
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 248/359 (69%), Gaps = 2/359 (0%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
E +I +L+ + +K++ L PE++++ ++Q LA+ EL + TY ++K KQ
Sbjct: 2 EKAIIERLDRIVEKFKEIEESLGKPEIIADQKKFQALAKEHKELQPIYETYMEYKKT-KQ 60
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
E E+ N++E+ E+ E K L L +LE +LK LL+P DP D +N++LE+RA
Sbjct: 61 GIEEAIEIIESANEDELIELAKEEKKELEERLEQLEAELKKLLIPKDPNDEKNVILEIRA 120
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GG+EA ++A DL RMY +Y+E+ WK ++S +E GG K V+ I G YS+LKY
Sbjct: 121 GTGGEEAALFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATISGKGAYSRLKY 180
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQR+P TE+ GR+HTS ATVAI+PEA+EV++ ID KD+++ T RS GAGGQ+VN
Sbjct: 181 ESGVHRVQRIPVTESGGRIHTSAATVAILPEAEEVDIHIDEKDLKIDTYRSSGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
++A+ + H PTGI + C+ ER+Q+QN+ +A+++LRA+L E+ R+Q+E++ + R SQ+
Sbjct: 241 TTDSAVRITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELYERQQKEQLDSARRSQI 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G+G R+EKIRTYN+ +NRVTDHR+K+ + L FLDG +D + + A EQ E +E LA
Sbjct: 301 GSGDRSEKIRTYNFPENRVTDHRIKLTLYNLEEFLDGELDEMIDALTAAEQAEKIEALA 359
>gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis
101-4-CHN]
gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis
101-4-CHN]
Length = 362
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 240/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y +++ + +++
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYHQYQKVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L ++ D+E+ EM E+ S E +L +L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEELLRDT-KDDELIEMTKEELASSKEEQDQLAHELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MY Y+E+ W ++ +E E GGFK +V+ I G++VYSKLK+E+G
Sbjct: 125 GDEASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMISGDKVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPEA++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 185 AHRVQRIPVTESAGRVHTSTATVGVMPEAEDVQIDLDPKDIRVDVYRSSGAGGQHINKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q +R +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQKEQSAYDQKRKDAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L +DG++D +++ +Q + LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMDGDLDEIIEALIIADQTKKLEQL 359
>gi|449875599|ref|ZP_21782300.1| peptide chain release factor 1 [Streptococcus mutans S1B]
gi|449253761|gb|EMC51703.1| peptide chain release factor 1 [Streptococcus mutans S1B]
Length = 359
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + K+ D E+ EM E+K+ E EEKLK LLLP P D +NI+LE+R AG
Sbjct: 63 AQEMIKDASGDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKAPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E WK ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L S L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEEL 357
>gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
gi|189039982|sp|A5CYC3.1|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
Length = 349
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 242/343 (70%), Gaps = 2/343 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+S K +++L + +PE++++ + +Q+ ++ AEL ++V+ YR +K K++++
Sbjct: 1 MIEKLDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELADIVAVYRDYKKVVKEIQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ AL KE DE++ EM +E+ L+ + LE +LK+LLLP DP D +N++LE+RAG G
Sbjct: 61 TIALMKEE-PDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ W+ ++ ++ + GGFK V+ I+G VYS++K+ESG
Sbjct: 120 GEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTS ATVA++PEA+EV+V IDP D+ + S G GGQ+VN +
Sbjct: 180 VHRVQRIPTTESGGRIHTSAATVAVLPEAEEVDVQIDPDDLRIDVFCSSGHGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +E++Q +NK +A+++LRA+L + +E Q+KI + R S VGTG
Sbjct: 240 SAVRITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARLLDRVQQEHQQKIASTRKSMVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSC 395
R+E+IRTYN+ NRVTDHR+ + L S LDG++D + +
Sbjct: 300 DRSERIRTYNFPQNRVTDHRVGLTLHRLDSVLDGDLDEIIDTL 342
>gi|333980787|ref|YP_004518732.1| peptide chain release factor 1 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824268|gb|AEG16931.1| Peptide chain release factor 1 [Desulfotomaculum kuznetsovii DSM
6115]
Length = 357
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 246/355 (69%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+S + +++LS +ADPEV+++ S +Q+ ++ AEL+E+V YR++K + + E
Sbjct: 1 MLDKLDSLEQRYEELSNLIADPEVINDRSRWQQYVKAHAELEEIVEVYREYKKVCRDIRE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L +E + + E++ +E+++ + ELE KLKVLLLP DP D +N+++E+RAG G
Sbjct: 61 AKELLREK-LEPDFRELVETELEAQEEKKGELEHKLKVLLLPRDPNDEKNVIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ WK L+++S + GG K V+ I+G YSKLK+ESG
Sbjct: 120 GEEAALFAADLFRMYTRYAERQGWKIDLMNTSYTDLGGIKEVIFLIEGRGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PEA+EV+V I+P D+ + S G GGQ+VN +
Sbjct: 180 VHRVQRVPTTESGGRIHTSAATVAVLPEAEEVDVEINPNDLRIDVFCSTGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK +A+++LRA+L + EQQ+KI + R S VGTG
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQHKNKEKAMRVLRARLLDRLQEEQQQKIASARRSMVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + L L G +D + + +Q L+++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIHRLEEVLMGELDEIIDALVTTDQARRLQQV 354
>gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98]
gi|422707081|ref|ZP_16764778.1| peptide chain release factor 1 [Enterococcus faecalis TX0043]
gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98]
gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043]
Length = 357
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 234/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DP ++S+ + +L++ A E V YR++K + + +
Sbjct: 1 MYDQLQSIEDRYEELGELLSDPAIISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L EN D EMAEM E+ L E LE+++K+LLLP DP D +NI++E+R AG
Sbjct: 61 AEELLSEN-LDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K V+M I G+ V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEE+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354
>gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 356
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 235/355 (66%), Gaps = 5/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L++ + +L+ +LADPEV++N Y KL++ E+ + V Y ++K + ++
Sbjct: 4 IFQSLQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQ- 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+A+E D EMA + ++ +L E +LEE+LK+L+LP DP D +NI++E+R AG
Sbjct: 63 ---VAEELLGDAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ +W ++I S E GG+K V + I G VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E++ ++ D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPATETQGRVHTSTATVGVMPEFEEIDFELNESDLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + + QR S VGTG
Sbjct: 240 TAVRLIHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESEYAAQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G + + + +Q L EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQTAKLAEL 354
>gi|358635920|dbj|BAL23217.1| peptide chain release factor 1 [Azoarcus sp. KH32C]
Length = 359
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 240/354 (67%), Gaps = 6/354 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+ +L +L+ PEV ++ ++ L + AE++ VVS Y ++ E+ E +R
Sbjct: 8 KLDFLTSRLTELDRELSSPEVAADMDSFRALGRERAEIEPVVSLYGAYRQAEEDCESARG 67
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ +D E+ E+ SE++ + + LE +L+ LLP DP D RN+ LEVRAG GGDE
Sbjct: 68 ML----SDPELRELAESELEEGAARIASLEGELQRALLPRDPNDDRNLFLEVRAGTGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+RMY +Y+E+ WK ++S+SE++ GG+K V++ + G YSKLK+ESG HR
Sbjct: 124 AALFAGDLLRMYTRYAERQRWKVEVVSASESDLGGYKEVIVRVLGAGAYSKLKFESGGHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP TE QGR+HTS TVA+MPEADE+E V I+P D+ + T R+ GAGGQ++NK ++A
Sbjct: 184 VQRVPTTETQGRIHTSACTVAVMPEADEIEAVNINPADLRIDTFRASGAGGQHINKTDSA 243
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+ + H PTGI + C ++R+Q +N+++A+ +L A+++++++REQQ K R S VG+G R
Sbjct: 244 VRITHLPTGIVVECQDDRSQHRNRAQAMSVLAARIHDMQLREQQAKEAATRKSLVGSGDR 303
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+E+IRTYN+ RVTDHR+ + ++L + + G ID VQ+ A Q E L LA
Sbjct: 304 SERIRTYNFPQGRVTDHRINLTLYKLDAVMQGEIDELVQALTAEHQAEQLAALA 357
>gi|365171434|ref|ZP_09361195.1| peptide chain release factor 1 [Synergistes sp. 3_1_syn1]
gi|363617719|gb|EHL69094.1| peptide chain release factor 1 [Synergistes sp. 3_1_syn1]
Length = 357
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 246/356 (69%), Gaps = 3/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KL+ ++++L +K+ADP V ++P E Q L + +L +V + +++ + + +
Sbjct: 3 LIDKLKEIEASYRELELKMADPAVANDPQEMQTLGKKHVDLTPIVDAFSQYEAVLQGIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + NG+DEEM E+ E+ +L + ELE+ ++VLLLP D D +++++E+R GAG
Sbjct: 63 AKEMI--NGDDEEMRELAKEELAALEERVPELEKDIRVLLLPKDINDDKSVIIEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA +++ +L RMY +++E+ WK +IS SE GGFK +V + G +S LK+ESG
Sbjct: 121 GEEAALFSANLFRMYTRFAERQRWKTEVISGSETGIGGFKEIVFRVDGTGAFSMLKFESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TEA GR+HTSTATVA++PEA +V+V I +D+++ T RS GAGGQ+VN +
Sbjct: 181 VHRVQRVPETEASGRIHTSTATVAVLPEAADVDVEIRSEDLKIDTYRSSGAGGQHVNMTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + C +ER+Q++N+++A+Q LR KLY+ +++ Q ++ +R QVGTG
Sbjct: 241 SAVRITHLPSGIVVTCQDERSQIKNRAKAMQFLRTKLYDAELQRQNAEMAAERKGQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
RAE+IRTYN+ NR++DHR+ + ++L LDG++ + + +Q E ++ L+
Sbjct: 301 DRAERIRTYNFPQNRLSDHRINLTLYKLDQILDGDLYELISMLSEADQAEKMKYLS 356
>gi|424757912|ref|ZP_18185640.1| peptide chain release factor 1 [Enterococcus faecalis R508]
gi|402406377|gb|EJV38935.1| peptide chain release factor 1 [Enterococcus faecalis R508]
Length = 357
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S +++L L+DP V+S+ + +L++ A E V YR++K + + +
Sbjct: 1 MYDQLQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L EN D EMAEM E+ L E LE+++K+LLLP DP D +NI++E+R AG
Sbjct: 61 AEELLSEN-LDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K V+M I G+ V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQKYAEVQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ + KDI + + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEE+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEM 354
>gi|366053830|ref|ZP_09451552.1| peptide chain release factor 1 [Lactobacillus suebicus KCTC 3549]
Length = 360
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 238/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DP+V+++ ++ KL++ L + V Y ++K +Q+ +
Sbjct: 4 IFEKLQAVADRYDELNELISDPDVIADTQKFMKLSKEEGSLRDTVEKYNEYKKINQQISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L +E D EM E+ E+ +L +LE++L+VLLLP DP D +NI++E+ AG
Sbjct: 64 DEELLREKL-DSEMEELTKEELSDSKEQLEKLEQELRVLLLPKDPNDDKNIIMEIHGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ W ++ +E E GGFK +V+ I G+ VYSKLKYE+G
Sbjct: 123 GDEASLFAADLFEMYSRYAEKQGWTIEVVDRNETEVGGFKEIVLMITGDSVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V++ +DPKDI RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDIDLDPKDIRTDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ +++Q QR S+VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNRVKAMQILKSRVYDYYQQKEQSAYNEQRKSKVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +D + + +Q E +E+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELDEIIDALVIADQAEKMEQL 357
>gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
gi|406709531|ref|YP_006764257.1| peptide chain release factor 1 [Streptococcus agalactiae
GD201008-001]
gi|424049399|ref|ZP_17786950.1| peptide chain release factor 1 [Streptococcus agalactiae ZQ0910]
gi|119361618|sp|Q3K119.1|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
gi|389649070|gb|EIM70555.1| peptide chain release factor 1 [Streptococcus agalactiae ZQ0910]
gi|406650416|gb|AFS45817.1| peptide chain release factor 1 [Streptococcus agalactiae
GD201008-001]
Length = 359
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDAELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEAL 357
>gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
Length = 356
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 234/342 (68%), Gaps = 2/342 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE+ + + ++ + PE + + Y KL + +L++VV Y ++K + ++
Sbjct: 1 MIDKLEAIKERFDEVGQLIVKPETIQDMDLYTKLTKEYKDLEKVVEKYNEYKIVLENIDT 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + D EM EM E++ L+ + ++EE+LK LL+P DP D++N++LE+R GAG
Sbjct: 61 SKEILSTE-KDPEMKEMAKMELEELNPQKEKIEEELKTLLIPKDPNDSKNVILEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMYQ+++E+ WK L+ ++ GGFK VV I G VY +KYESG
Sbjct: 120 GDEAAIFAGDLLRMYQRFAEKRKWKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTS A+VA++PE ++VEV IDP D+ S G GGQ+VN
Sbjct: 180 VHRVQRVPATETQGRVHTSAASVAVLPEMEDVEVNIDPSDVRSDYFCSSGPGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK++A+++LR+KLYEI++ +QQE++ QR S VG+G
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKAKAMKVLRSKLYEIELSKQQEELGAQRKSMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQS 394
R++KIRTYNY RVTDHR+K L + +DG I + ++S
Sbjct: 300 DRSDKIRTYNYPQGRVTDHRIKYTVHNLPNVMDGEIADFIES 341
>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
Length = 360
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 240/360 (66%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P ++ KL + ++ +L+ L+ + S+ Y+K+++ AE+ +V YR ++ CE L
Sbjct: 3 PSMLKKLATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDL 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+E+ A+ D EM EI++ L E+ L+ LLLP DP D RNI LE+RAG
Sbjct: 63 KEAHAMLA----DPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ ++AGDL RMY +Y+E+ WK ++S+SE+E GG+K ++ +I+G YSKLK+E
Sbjct: 119 TGGDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TE QGR+HTS TVA++PE DEV +V I P DI + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTGI + C + R+Q NK++A+Q+L A++ +V EQQ KI ++R S +
Sbjct: 239 KTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVNEQQSKIASERRSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY R+TDHR+ + +++ + +G++D + + A Q +LL L E
Sbjct: 299 GSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELINALANEHQADLLATLGE 358
>gi|333376032|ref|ZP_08467826.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
Length = 375
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 251/375 (66%), Gaps = 12/375 (3%)
Query: 37 PSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDE 96
P+LS IC+ +P ++ KL++ A ++++ L PE +N Y+KL Q AEL
Sbjct: 11 PALS------ICIMKPSILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTP 64
Query: 97 VVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPS 156
+V TY++++ E L + A+E +D +M E A EI++ ++ +L+ +L+ LLLP
Sbjct: 65 IVETYQQYRQAESDLTD----AQEMLSDPDMKEFAAEEIEATKIKIEQLDFELQKLLLPK 120
Query: 157 DPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVV 216
D D +NI +E+RAG GGDEA ++AGDL+RMY +++E+N W+ ++S+SE++ GG+K V+
Sbjct: 121 DADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVI 180
Query: 217 MEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIE 275
+ + G YSKLK+ESG HRVQRVP TE+QGR+HTS TVA+MPEADE+ E+ ++P D+
Sbjct: 181 VRLIGLGAYSKLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLR 240
Query: 276 LTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKV 335
+ T R+ GAGGQ++NK ++AI + H PTG+ + C + R+Q NK++A+++L A+L + +
Sbjct: 241 IDTFRASGAGGQHINKTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQK 300
Query: 336 REQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSF-LDGNIDNAVQS 394
RE Q K +R S +G+G R+E+IRTYNY RVTDHR+ + F +DG+++ +
Sbjct: 301 REAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITSA 360
Query: 395 CAAMEQKELLEELAE 409
A Q ELL + +
Sbjct: 361 LIAEHQAELLAAMGD 375
>gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
Length = 357
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/329 (48%), Positives = 232/329 (70%), Gaps = 6/329 (1%)
Query: 80 NPSEYQK---LAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIK 136
N +YQK L++ A+L+ +V ++++ KQ+EE+R L E+G DEE+ E+ ++++
Sbjct: 22 NAGDYQKVIELSKERADLEPIVEKAQEYRTVLKQIEEARTLL-ESG-DEELRELAEADLE 79
Query: 137 SLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNS 196
+L LE++LK LL+P DP D RN+++E+RAG GG+EA ++AGDL RMY +Y+E+
Sbjct: 80 TLEPRQEVLEKELKTLLIPKDPRDERNVIVEIRAGTGGEEAALFAGDLFRMYSRYAEKRG 139
Query: 197 WKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATV 256
W +IS +E GG+K ++ +KG YS+LKYESGVHRVQR+P TE+ GR+HTSTATV
Sbjct: 140 WSVEIISQNETGIGGYKEIIFMVKGKGAYSRLKYESGVHRVQRIPVTESSGRIHTSTATV 199
Query: 257 AIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQL 316
A++ E DEV++ I D+E+ RS GAGGQNV K TA+ + H PTGI + C +ER+QL
Sbjct: 200 AVLAEVDEVDINIPDSDLEIEVYRSAGAGGQNVQKNSTAVRITHLPTGIVVACQDERSQL 259
Query: 317 QNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKM 376
QNK RA+ +LRAKLYEI+ +++Q+++ R SQVGTG RAEKIRTYN+ +RVTDHR+ +
Sbjct: 260 QNKLRAMSILRAKLYEIEEQKRQQELDATRRSQVGTGERAEKIRTYNFPQSRVTDHRIGI 319
Query: 377 -NFELTSFLDGNIDNAVQSCAAMEQKELL 404
++ L + LDG ID + A + E L
Sbjct: 320 SSYNLPAVLDGEIDLFIDELALRSETERL 348
>gi|365155864|ref|ZP_09352211.1| peptide chain release factor 1 [Bacillus smithii 7_3_47FAA]
gi|363627942|gb|EHL78770.1| peptide chain release factor 1 [Bacillus smithii 7_3_47FAA]
Length = 356
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 244/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DP++V++P + + ++ +++ E V TYR++K ++Q +E
Sbjct: 1 MFDRLQAVEDRYEKLNELLSDPDIVNDPKKLRDYSKEQSDIAETVQTYREYKKKKQQYQE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E D EM EM+ E+ L +L +LEE+LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKEMLEEK-LDPEMREMVKEELHDLEGQLEDLEEQLKILLLPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E WK +I ++ GG+K ++ I+G +S+LKYE+G
Sbjct: 120 GEEAALFAGDLYRMYSRYAESKGWKTEVIEANPTGLGGYKEIIFMIQGKGAFSRLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I+ KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVEINEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ +E Q + +R S VGTG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKYQQEAQAEYDEKRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L+G +D + + EQ + LE L
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQVLEGKLDEVIDALILEEQSKKLENL 354
>gi|408673534|ref|YP_006873282.1| Peptide chain release factor 1 [Emticicia oligotrophica DSM 17448]
gi|387855158|gb|AFK03255.1| Peptide chain release factor 1 [Emticicia oligotrophica DSM 17448]
Length = 359
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 247/360 (68%), Gaps = 2/360 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE+ + ++++S ++ PEVVS+ +++ +L++ +L+++V+ Y+ +K+ +E
Sbjct: 1 MLNQLEAIRERYEEVSQQMTMPEVVSDMTKFTRLSKEYKDLEKIVNEYKIYKNVLSNIEG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N DEEM ++ E+ L + LE LK +L+P DP D++N++LE+RAG G
Sbjct: 61 AKDIIA-NEKDEEMRDLAKEELDELLPQKETLEATLKEMLIPKDPNDSKNVILEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMYQ++ E+ W+ TL+ +E GG+K +V++++G VY KLKYESG
Sbjct: 120 GDEASIFAGDLFRMYQRFIEKQGWRMTLLDHNEGTAGGYKEIVVQVEGEDVYGKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTS ATVA +PEADEV++ I+ DI + T S GAGGQ+VN
Sbjct: 180 VHRVQRVPATESQGRVHTSAATVAALPEADEVDLTINMNDIRVDTFCSSGAGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+Q++N+ +AL +LR++LYE+++ + E I +R VG G
Sbjct: 240 SAVRMVHIPTGVTVSCQDERSQIKNREKALSVLRSRLYEMEMAKHNEAISAERKGLVGNG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R++KIRTYNY +RVTDHR+ + L + ++G ID ++ + E ++E A +V
Sbjct: 300 DRSDKIRTYNYPQSRVTDHRIGYTVYNLPTVMEGEIDGFIEQLRMADNAEKIKENAMAVA 359
>gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33]
gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33]
gi|386577820|ref|YP_006074226.1| Peptide chain release factor 1 [Streptococcus suis GZ1]
gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33]
gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33]
gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1]
Length = 364
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 8 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVD 67
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 68 AEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAG 127
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 128 GDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 187
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 188 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 247
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 248 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 307
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 308 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 362
>gi|402835618|ref|ZP_10884181.1| peptide chain release factor 1 [Mogibacterium sp. CM50]
gi|402273900|gb|EJU23090.1| peptide chain release factor 1 [Mogibacterium sp. CM50]
Length = 354
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 250/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ + +++LS K++DP+V++ E+Q+L + M++L+ +V Y +K +++LEE
Sbjct: 1 MFDKLDFILEKYEELSRKVSDPDVIARQKEWQRLMKEMSDLEPIVKEYTAYKKAKEELEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + + EE+ EM E+KS + + E LK+LLLP DP D +N++LEVRAG G
Sbjct: 61 AKEILELEDD-EELREMAREELKSNEAAIEQFTENLKILLLPKDPNDDKNVILEVRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++ DL+RMY +Y+E+ WK LI S+E E GG K V+ IKG YS+LKYESG
Sbjct: 120 GDEAALFGSDLLRMYLRYAERMRWKTELIESNETEIGGVKEAVLLIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GRVHTS A++A+MPE D+VEV +DP D+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRVHTSAASIAVMPEVDDVEVNLDPNDVRIDVYRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A ++L+A+LY++ +EQ +KI +R SQ+G+G
Sbjct: 240 SAVRLTHIPTGLVVTCQDEKSQIKNKDKAFKVLKARLYDLMQQEQNDKIAAERKSQIGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ +R+TDHR+ + ++L SFLDG++D + + +Q E + E
Sbjct: 300 DRSERIRTYNFPQSRITDHRINLTLYKLDSFLDGDLDEVIDALITEDQAEKMREF 354
>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
gi|119361559|sp|Q1GYE8.1|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
flagellatus KT]
Length = 360
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 246/360 (68%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P +I KL + ++ +L+ L+ +V ++ Y+K+ + AE+ +V +R ++ E +
Sbjct: 3 PSMIKKLATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEIDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+E++A+ D EM E E ++ +L ++E++L+ LLLP DP D RNI LE+RAG
Sbjct: 63 KEAQAMLA----DPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ ++AGDL RMY +Y+E+ WK ++S++E+E GG+K ++ +I+G YSKLK+E
Sbjct: 119 TGGDESALFAGDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TE QGR+HTS TVA++PE DEV +V I+P DI + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTGI + C + R+Q NK++A+Q+L A++ +V EQQ KI ++R S +
Sbjct: 239 KTDSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVDEQQSKIASERRSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY R+TDHR+ + +++ + +G++D + + AA Q +LL L E
Sbjct: 299 GSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELINALAAEHQADLLATLGE 358
>gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
Length = 357
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 240/352 (68%), Gaps = 2/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L+S + +++ ++DP+V+++ ++ +++ A+L V T+ +KD + +E++
Sbjct: 5 QLDSFIARYAEVTELMSDPDVINDNQRFRAISKEEADLRPKVETFSHYKDVIQAIEDTEE 64
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L E+ +D+EM E+ E+K L E LEE++K L++PSDP D +NI++E+R AGGDE
Sbjct: 65 LLAES-SDDEMTELAKEELKELKAERESLEEEIKRLMIPSDPNDDKNIIMEIRGAAGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL MY +Y+ W+ +I SS + GGFK + ++I+G++VYSKLK+ESG HR
Sbjct: 124 AQLFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEITLQIQGDKVYSKLKFESGAHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE ++++ +D DI + R+ GAGGQ+VNK +A+
Sbjct: 184 VQRVPDTESQGRVHTSTATVGVMPELEDIDFDLDEGDIRIDIYRASGAGGQHVNKTSSAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
L H+PTGI++ ++R+Q QNK +A+ +LR+++YE EQQ + +QR + VGTG R+
Sbjct: 244 RLTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKIASEQQNEYDSQRKNLVGTGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYNY NRVTDHR+ + + L + G +D V + +Q LEEL
Sbjct: 304 ERIRTYNYPQNRVTDHRIGLTIQKLDRIMTGELDEIVDALLLADQANKLEEL 355
>gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 358
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 238/348 (68%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++ +L +P V ++ + +QKL + +EL + Y ++K+C++ +E+
Sbjct: 1 MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E +DEEM EM+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLMMLDEE-SDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY KY+E +W+ ++S +E GGFK V I G YSKLKYESG
Sbjct: 120 GDEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+E++ +D D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAIMPEAEEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++QL+NK +AL++LR++LY+++++++ + R SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAEAEARRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+K+ +L S ++G+I + + A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQ 347
>gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
gi|384129898|ref|YP_005512511.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
Length = 357
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 249/356 (69%), Gaps = 8/356 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE+ K ++++ +L+ +V+ + +++ KL++ + ++ EVV YR++K +K ++E++
Sbjct: 9 KLEAIEKRYEEIQNRLSSQDVIRDRAQFAKLSKDLKDIGEVVDLYRRYKKVQKDIKEAQE 68
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L K E E+ EIK L E +E++LK+L+LP D D+RN++LE+RAG GG+E
Sbjct: 69 LLKSR----EFEELAKEEIKRLKREEERIEKELKILMLPKDERDSRNVILEIRAGVGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++ DL+ MYQKY+E+ WK +++S++ GG+K V+ I+G YS+LKYESGVHR
Sbjct: 125 AALFVADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIALIEGVGAYSRLKYESGVHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQR+P+TE+ GR+HTSTATVA++PE DE E+ I+P+D+++ T R+ GAGGQ VN ETA+
Sbjct: 185 VQRIPRTESGGRIHTSTATVAVLPEVDETELEINPQDLKIETFRASGAGGQYVNTTETAV 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI + C +ER+Q QNK +AL++L A+L + R+++E+I +R QVGTG R+
Sbjct: 245 RVTHIPTGISVACQDERSQFQNKQKALKILYARLKDFYERQKEEEIAKERKMQVGTGERS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
EKIRTYN+ RVTDHR+ + ++L L+G +D ++ A+ Q ++ E+L V
Sbjct: 305 EKIRTYNFPQGRVTDHRINLTLYKLHDVLEGKLDEIIE---ALIQHDIDEKLKAQV 357
>gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68]
gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3]
gi|386584042|ref|YP_006080445.1| peptide chain release factor 1 [Streptococcus suis D9]
gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3]
gi|353736188|gb|AER17197.1| peptide chain release factor 1 [Streptococcus suis D9]
Length = 359
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNMVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 355
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/357 (46%), Positives = 233/357 (65%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE + ++ +LA +V ++ + ++KL + ++L +V TY ++K KQL+E
Sbjct: 1 MFDNLEDIVIHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKA-KQLQE 59
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
AL ND+EM EM E+ EL EKLK+LLLP DP D +NIMLE+RAGAG
Sbjct: 60 D-ALEMLEMNDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY Y+E +WK +I +E GG+K VV + G YSKLKYESG
Sbjct: 119 GDEAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTA+VA+MPEA+EV+V ID D+ + R+ G GGQ VN +
Sbjct: 179 VHRVQRVPETESGGRIHTSTASVAVMPEAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A LLR+KLYEI++ ++Q R SQ+GTG
Sbjct: 239 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQSAEAADRRSQIGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+ + ++L ++G+I + C A +Q L +L E
Sbjct: 299 DRSEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQAAKLAKLNE 355
>gi|395794825|ref|ZP_10474141.1| peptide chain release factor 1 [Pseudomonas sp. Ag1]
gi|421138189|ref|ZP_15598259.1| peptide chain release factor 1 [Pseudomonas fluorescens BBc6R8]
gi|395340986|gb|EJF72811.1| peptide chain release factor 1 [Pseudomonas sp. Ag1]
gi|404510612|gb|EKA24512.1| peptide chain release factor 1 [Pseudomonas fluorescens BBc6R8]
Length = 360
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRTYSKEYAEVEPIVGTYKQLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ ++LIELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKDKLIELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 VHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|345023583|ref|ZP_08787196.1| peptide chain release factor RF-1 [Ornithinibacillus scapharcae
TW25]
Length = 356
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 241/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + L+ L+DPEV+S+ ++ ++ ++ + L++VV YR++KD QL++
Sbjct: 1 MLDRLQSLEDRYNKLNELLSDPEVISDTNKLREYSKEQSGLEDVVQAYREYKDVTGQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E+ D+EM M+ +EI LS ELEE++K+LLLP DP D +N+ +E+R AG
Sbjct: 61 AKEML-EDDLDQEMHAMVKTEISDLSAAKEELEERMKILLLPKDPNDDKNVFVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y E WK ++ + GG+K ++ +KG YSKLKYE+G
Sbjct: 120 GDEAALFAGDLYRMYTRYVESQGWKADVMDAHTTGVGGYKEIIFMVKGQGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVEV + KDI + S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEVELHDKDIRVDLFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVSMQDEKSQIKNKEKAMKILRARVYDKFQQEAQAEYDEHRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ NRVTDHR+ + + L L+G +D + + EQ + LE++ E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEEQAKKLEQIGE 356
>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
Length = 360
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE +++L+ L D EV+S+ + ++ ++ AE++ V + Y++++ + LE
Sbjct: 5 LLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGRVHTS TVA++PE DE + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAALGD 360
>gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
gi|357051354|ref|ZP_09112548.1| peptide chain release factor 1 [Enterococcus saccharolyticus 30_1]
gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
gi|355380176|gb|EHG27321.1| peptide chain release factor 1 [Enterococcus saccharolyticus 30_1]
Length = 357
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP V+S+ + +L++ A E V YR++K+ + +++
Sbjct: 1 MYDQLQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L EN D EMAEM E+ L E LE+++K+LLLP DP D +NI++E+R AG
Sbjct: 61 TEELLGEN-LDAEMAEMAKEELSDLKKEKDVLEDRIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K V+M I G VYSKLKYESG
Sbjct: 120 GDEAALFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMISGENVYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ I KDI + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDIADKDIRTDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LRA++Y+ +E + + R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEARSEYDANRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEE+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALIMYDQTSKLEEM 354
>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
Length = 361
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 240/359 (66%), Gaps = 4/359 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KL+ A +++L+ L+DP+V+ N ++++ L++ AE+D VV Y+ + L+
Sbjct: 5 LQGKLDKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYLQAADNLDA 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+RA+ ++ +D +M EM A E + + EL E+L+ L+LP DP D N+ LEVRAG G
Sbjct: 65 ARAM--QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY KY++Q WK ++S+SE E GG+K V+ + G+ VYS++K+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVAIM EA+++ ++ I +D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C +ER+Q +NK+RA+ LL AKLY+ + + +R S VG+
Sbjct: 243 DSAVRITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
G R+E+IRTYNY RV+DHR+ + + L ++G++D + + A Q + L L ES
Sbjct: 303 GDRSERIRTYNYPQGRVSDHRINLTLYRLGELMEGDMDELLGALLAEYQADQLAALGES 361
>gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1]
Length = 357
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 236/348 (67%), Gaps = 1/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL + + ++S KL+ P++VS+ Y +L + + ++ YR++K + Q EE
Sbjct: 1 MFEKLAAMETKYNEISDKLSQPDIVSDNKLYTQLMKEYKNMTPIIEKYREYKSAQAQNEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L G D + EM+ +E++ + + ++LK+LLLP DP D +N+++E+R GAG
Sbjct: 61 AKELLDGGGLDRDFKEMVQAELEESKEAMENVTQELKILLLPKDPNDDKNVIIEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A L RMY Y+E WK ++S++ E GGFK + I+G YS+LKYESG
Sbjct: 121 GEEASLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSIEGEGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGR+HTST TVA++ EAD+VE+ I+P D+++ R+ GAGGQ++NK E
Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVLVEADDVELEINPTDLKIDYFRASGAGGQHINKTE 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + + PT + + C +ER+Q +NK +A+++LR+++YE +EQ +KI ++R SQVGTG
Sbjct: 241 SAVRITYLPTNVVVECQDERSQHKNKDKAMKILRSRIYEAMQQEQNDKIASERRSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+E+IRTYNY R+TDHR+ + + L L+GN+D S A +Q
Sbjct: 301 DRSERIRTYNYPQGRLTDHRIGLTIYRLEDILNGNLDEVFDSLATADQ 348
>gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
gi|238692678|sp|B3QRH7.1|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
Length = 357
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 163/353 (46%), Positives = 236/353 (66%), Gaps = 3/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + + +L+DPEV ++ + ++KL + + L E+V Y ++ ++QL+E
Sbjct: 1 MFDKLQSIKDKYLTIEQQLSDPEVAADQNRFRKLNKEYSGLREIVRAYDNWRSAKQQLDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ K D EM + A+E + L L ELE+ LK+LLLP D D RN ++E+RAG G
Sbjct: 61 TLAMQKSE-EDPEMRALAAAEAEELQERLPELEQNLKILLLPKDEADTRNAIIEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
GDEAG++A DL+RMYQ+Y+E+ W C + SE G K V +E+ G+ VY LK+ES
Sbjct: 120 GDEAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSLKEVSLEVSGHDVYGILKFES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP+TE QGR+HTS A+VA++PEA+EV+V I D+++ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRKDDLQMDTFRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H P+GI + C EER+QLQN+ RA+++LR+KLY+IK+ EQ + R S V T
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKITEQLQSRADLRRSMVAT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELL 404
G R+ KIRTYN+ +RVTDHR+ L + G ++ + + +Q E L
Sbjct: 300 GDRSAKIRTYNFPQSRVTDHRIGFTTHALPQVMQGELEPIIDALRMHDQAERL 352
>gi|333998861|ref|YP_004531473.1| peptide chain release factor 1 [Treponema primitia ZAS-2]
gi|333740985|gb|AEF86475.1| peptide chain release factor 1 [Treponema primitia ZAS-2]
Length = 361
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 244/358 (68%), Gaps = 2/358 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+LES + +++S + DPE+V + +Y+ + ++L+ + ST R+ ++ QLE++++
Sbjct: 4 RLESLLRRHEEVSRLIQDPELVRDQKKYRDTMKEYSQLEALASTQRETEEISGQLEDAKS 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L+ +N D EM EM E++ L L + E++LK LL+P DPLD +NI++E+RAG GGDE
Sbjct: 64 LS-QNEKDPEMREMAKEELRELETRLKDAEDRLKFLLIPRDPLDEKNIIMEIRAGTGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +++E WK ++SS+E E GGFK +V I GN VY L+YESGVHR
Sbjct: 123 AALFASDLYRMYARFAETRGWKFEIMSSNETELGGFKEIVFSITGNNVYENLRYESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS TVA++PEADE E+ I +D+ + R+GG GGQ VN ++A+
Sbjct: 183 VQRVPATEASGRIHTSAVTVAVLPEADETEIDIRQEDLRIDVMRAGGPGGQCVNTTDSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +E++Q++NK++A+++LRA++YE++ + + R +QVG+G R+
Sbjct: 243 RITHIPTGVVVHCQDEKSQIKNKAKAMRILRARVYEMEEAKAASERAEARKNQVGSGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGA 413
E+IRTYN+ NR+TDHR+ + ++L + G+++ + ++ELL+ A + A
Sbjct: 303 ERIRTYNFPQNRLTDHRINLTLYKLDLIMQGDVEELFDALKLSAREELLQTTASVIAA 360
>gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84]
gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7]
gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407]
gi|386579874|ref|YP_006076279.1| peptide chain release factor 1 [Streptococcus suis JS14]
gi|386581821|ref|YP_006078225.1| peptide chain release factor 1 [Streptococcus suis SS12]
gi|403061457|ref|YP_006649673.1| peptide chain release factor 1 [Streptococcus suis S735]
gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84]
gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407]
gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7]
gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14]
gi|353733967|gb|AER14977.1| peptide chain release factor 1 [Streptococcus suis SS12]
gi|402808783|gb|AFR00275.1| peptide chain release factor 1 [Streptococcus suis S735]
Length = 359
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|417093084|ref|ZP_11957473.1| peptide chain release factor 1 [Streptococcus suis R61]
gi|353531980|gb|EHC01657.1| peptide chain release factor 1 [Streptococcus suis R61]
Length = 359
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNIID 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|402313584|ref|ZP_10832498.1| peptide chain release factor 1 [Lachnospiraceae bacterium ICM7]
gi|400366071|gb|EJP19110.1| peptide chain release factor 1 [Lachnospiraceae bacterium ICM7]
Length = 356
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 168/357 (47%), Positives = 232/357 (64%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE + ++ +LA +V ++ + ++KL + ++L +V TY ++K KQL+
Sbjct: 1 MFDNLEDIVVHYDEIMAELASGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKA-KQLQV 59
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
AL NDEEM EM E+ EL EKLK+LLLP DP D +NIMLEVRAGAG
Sbjct: 60 D-ALEMLEMNDEEMREMAKEELAEGKRLEEELSEKLKILLLPKDPNDDKNIMLEVRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY Y+E +WK +I +E GG+K VV + G YSKLKYESG
Sbjct: 119 GDEAALFAMQLYRMYTHYAESQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTA+VA+MPEA+EV+V ID D+ + R+ G GGQ VN +
Sbjct: 179 VHRVQRVPETESGGRIHTSTASVAVMPEAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A LLR+KLYEI++ ++Q R SQ+GTG
Sbjct: 239 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQSAEAADRRSQIGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+ + ++L ++G+I + C A +Q L +L E
Sbjct: 299 DRSEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQAAKLAKLNE 355
>gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
Length = 359
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 240/343 (69%), Gaps = 2/343 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE +K + +L+ + DPE+V +P Y+++ + + L +V+ +Y ++K+ + + E
Sbjct: 1 MLKKLEELSKRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D +M EM E+K+L + + E+E LK+LL+P DPL+ +NI++E+R GAG
Sbjct: 61 AQHLITEE-DDHDMKEMAREELKALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+E +WK ++ +SE E GG+K + I G VY L++E G
Sbjct: 120 GDEASLFAADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TEAQGR+HTS TVA++PEA+E E+ I P+D+ + R+GG GGQ VN +
Sbjct: 180 VHRVQRVPETEAQGRIHTSAVTVAVLPEAEETEIEIRPEDLRVDVMRAGGPGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + +E++Q++NK++A+++LRA+L++++ ++Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQAERSAARKSMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSC 395
R+E+IRTYN+ NRVTDHR+ + ++L F+ GN+D + +
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDQFMQGNLDEMLDAL 342
>gi|410594574|ref|YP_006951301.1| peptide chain release factor 1 [Streptococcus agalactiae SA20-06]
gi|421532248|ref|ZP_15978614.1| peptide chain release factor 1 [Streptococcus agalactiae
STIR-CD-17]
gi|403642532|gb|EJZ03369.1| peptide chain release factor 1 [Streptococcus agalactiae
STIR-CD-17]
gi|410518213|gb|AFV72357.1| Peptide chain release factor 1 [Streptococcus agalactiae SA20-06]
Length = 359
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 232/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDAELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGFTLQKLDTILSGKMDEVIDALVMYDQTQKLEAL 357
>gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera versatilis 301]
gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera versatilis 301]
Length = 360
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 246/360 (68%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P +I KL + ++ ++++ ++ V +N Y+KL Q AE+ +V Y F+ E +
Sbjct: 3 PSMIRKLATLSERLEEINRLMSSEGVTNNMDNYRKLTQEHAEITPIVEQYHLFEQAEADI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+E++++ +D +M E EI++ +L ++E+ L+VLLLP DP D +N+ LE+RAG
Sbjct: 63 KEAQSML----SDPDMKEFAQEEIEAGKEKLEQVEKSLQVLLLPKDPNDDKNLFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+G++ GDL RMY +Y+E+ WK ++S++E+E GG+K ++ +I+G YSKLK+E
Sbjct: 119 TGGDESGLFCGDLFRMYSRYAEKQKWKVEIMSANESEVGGYKEIIAKIEGYGAYSKLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE QGR+HTS TVA++PEADEV +VVI+P DI + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPDTETQGRIHTSACTVAVLPEADEVSDVVINPADIRIDTYRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTGI + C E R+Q NK++A+ +L A++ +V EQ KI ++R S +
Sbjct: 239 KTDSAVRITHAPTGIVVECQEGRSQHANKAQAMAVLAARIKAKQVDEQNSKIASERKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY R+TDHR+ + +++ + +G++D + + +A Q +LL L E
Sbjct: 299 GSGDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELIGALSAEHQADLLASLGE 358
>gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
51172]
gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
51172]
Length = 358
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 244/356 (68%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE + +K L KLADP V+++ +++K+++ L VV Y + K+ E + E
Sbjct: 1 MFENLEHVRENYKQLEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D++M +M+ EI+ ++L L++++++LL+P DP D +++++E+R GAG
Sbjct: 61 NQELINE-ADDQDMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AGDL RMY Y+++ +K I + GG K ++G YSKLKYESG
Sbjct: 120 GDEAGLFAGDLYRMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PE DEVE+ IDP DI RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEVDEVELHIDPNDIRTDVYRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + +E++Q++NK +A+++LRA+LYE++ +++ ++I R SQVGTG
Sbjct: 240 SAVRLTHIPTGLVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNKEIADNRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ R+TDHR+ K ++L FL+G+I++ + S A +Q LE++
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIYQLDDFLNGDIEDMINSLIAEDQTRKLEKVG 355
>gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 357
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 164/357 (45%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L + L DP V + + +L + A+L +V Y+++K ++ +E+
Sbjct: 1 MFDRLDDMLIHYEELMLMLGDPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E + EEM EM E+ + ELE +LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLALLEEEND-EEMREMAKEELSDAKKRIEELEHELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y++ + WK +IS +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFAAELYRMYSNYADSHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+EV+V ID DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY+I++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + + A +Q L +++E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLAKMSE 356
>gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 366
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 234/351 (66%), Gaps = 2/351 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
I++LE+ +++LS L+DP ++++ Y ++ + A L E+V R + + +L E+
Sbjct: 3 ISQLEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELAEN 62
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
A+ +E +DEEM ++ EI+ L +L ELEEKL++LLLP DP D +N+ LE+R GAGG
Sbjct: 63 LAMLQET-DDEEMRLLLKEEIRDLKVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGAGG 121
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
+EA ++A L RMYQ Y+E +K ++ + E GG K VV I+G+ YS KYESGV
Sbjct: 122 EEAALFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYESGV 181
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQRVP TE+ GR+HTST TVA++PE DEV+V I P DI + T RS GAGGQ+VNK ++
Sbjct: 182 HRVQRVPVTESGGRIHTSTVTVAVLPEVDEVDVEILPGDITIDTYRSSGAGGQHVNKTDS 241
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
AI + H PTGI + C ++R+Q +NK RA+ +LRAKLYE E+ I R QVGTG
Sbjct: 242 AIRITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLYERAQEERAGSIAEARRDQVGTGD 301
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY RVTDHR+ + +++ L GN+D ++ E+ +LL
Sbjct: 302 RSERIRTYNYPQGRVTDHRIGLTVYKIDEILAGNLDLIIEPLMRAERTKLL 352
>gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
Length = 362
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 242/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE + ++ L+ L+DP+VVS+ + + ++ +++ V+ +R++KD +Q+++
Sbjct: 3 IFGQLEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E D+EM EM+ EIK L L +EE+LK+LLLP DP D +N+++EVR AG
Sbjct: 63 TKELL-EIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY +++E WK ++ SE GG K + I G VYSK+K+ESG
Sbjct: 122 GDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATV ++PEA+E+E+ I+ DI + T S GAGGQ+VN
Sbjct: 182 AHRVQRVPTTESSGRIHTSTATVVVLPEAEEIEIDINENDIRVDTFASSGAGGQSVNTTM 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + +ER+Q++NK +A+++LRA++Y+ +E+Q K +R S+VGTG
Sbjct: 242 SAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + + L ++G +D +++ EQ E + EL
Sbjct: 302 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAEL 356
>gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
Length = 358
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 238/348 (68%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++ +L +P V ++ + +QKL + +EL + Y ++K+C++ +E+
Sbjct: 1 MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E +DEEM EM+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLMMLDEE-SDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY KY+E +W+ ++S +E GGFK V I G YSKLKYESG
Sbjct: 120 GDEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+E++ +D D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAIMPEAEEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++QL+NK +AL++LR++LY+++++++ + R SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHDAEAEARRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+K+ +L S ++G+I + + A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQ 347
>gi|379008526|ref|YP_005257977.1| peptide chain release factor 1 (bRF-1) [Sulfobacillus acidophilus
DSM 10332]
gi|361054788|gb|AEW06305.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfobacillus
acidophilus DSM 10332]
Length = 358
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 235/337 (69%), Gaps = 3/337 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+ ESA + +L ++A+P V SNP +K Q +AE +++V TY + E LE ++
Sbjct: 8 RCESAKARYLELQEEMANPTVASNPELARKYGQELAEAEQLVHTYEAYVAAEADLEVAKD 67
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+A+++ D E + SE++ L L E +++ LL P DP D++N+++E+R GAGGDE
Sbjct: 68 MARDD--DPEARQWAESEVERLRQALDRWEREIQQLLAPRDPNDSKNVIMEIRGGAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A +L RMY +++E++ W+ ++SSS + GGFK ++ I+G YS LKYESGVHR
Sbjct: 126 AALFAAELYRMYVRFAERHGWRTEVLSSSPTDIGGFKEIIFMIEGRGAYSLLKYESGVHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEAQGR+HTST TVA++PEA+E +VVI+P ++ + T R+ GAGGQ+VNK E+A+
Sbjct: 186 VQRVPVTEAQGRIHTSTVTVAVLPEAEETDVVINPDELRIDTQRASGAGGQHVNKTESAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI ++C +E++QL+N+ +A+++LR++L ++ E IR +R SQVGTG R+
Sbjct: 246 RITHLPTGIVVYCQDEKSQLKNREKAMRILRSRLQDLYETEAANAIRDERRSQVGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAV 392
E+IRTYN+ RVTDHR+ + + + LDG++D +
Sbjct: 306 ERIRTYNFPQGRVTDHRIGLTLHRIEAILDGDLDELI 342
>gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
gi|409913549|ref|YP_006892014.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
gi|61214645|sp|Q748B1.1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
Length = 355
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 248/358 (69%), Gaps = 5/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E + +L LADP V+ N E+++L++ +L ++ +YR +K +++E
Sbjct: 1 MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L D EM EM +E++ L ELE ++K+LLLP DP D RN++LE+RAG G
Sbjct: 61 NRELLA----DPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++AGDL RMY +++E+N WK ++S+SE+E+GGFK +V I+G V++KLKYESG
Sbjct: 117 GDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVA++PEA+++EV I+P D+++ R+ GAGGQ+VNK E
Sbjct: 177 THRVQRVPETEAQGRIHTSACTVAVLPEAEDIEVDINPADLKIDVYRASGAGGQHVNKTE 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+Q++N+++A+++L+ K+ + +EQ +I R QVG+G
Sbjct: 237 SAVRITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + + L S ++G+I V + Q E L+ AE+
Sbjct: 297 DRSERIRTYNFPQGRMTDHRIGLTLYRLDSLMEGDIAEVVDALRTHYQMEALKAQAEA 354
>gi|398816999|ref|ZP_10575634.1| peptide chain release factor 1 [Brevibacillus sp. BC25]
gi|398031511|gb|EJL24897.1| peptide chain release factor 1 [Brevibacillus sp. BC25]
Length = 411
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 247/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ T+L + + +++++ L DP+V+S+ ++L++ + L+E V+TYR++K Q+++
Sbjct: 54 MFTRLSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDD 113
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E +DE M EM+ E+ LS +LE++LK+LLLP DP D +N+++E+R AG
Sbjct: 114 AKAMLEEKLDDE-MREMVKLELSELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAG 172
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY +++E+N++K ++ +S + GG+K +V + G YSK+K+ESG
Sbjct: 173 GDEAALFAAVLFRMYTRFAERNAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESG 232
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTSTATV ++PEA++VEV + KDI + T S GAGGQ+VN +
Sbjct: 233 AHRVQRIPATESGGRIHTSTATVLVLPEAEDVEVEVHEKDIRIDTFCSSGAGGQSVNTTK 292
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q NK +AL++LRA+L++ +++Q + R S VGTG
Sbjct: 293 SAVRVTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLFDFYMQQQNAEADATRKSLVGTG 352
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY +RVTDHR+ + L S L+G +D + + EQ ELL+ A S
Sbjct: 353 DRSERIRTYNYPQSRVTDHRIGLTLHRLESVLEGEMDEVIDNLIMHEQTELLKSHAHS 410
>gi|386588052|ref|YP_006084453.1| peptide chain release factor 1 [Streptococcus suis A7]
gi|354985213|gb|AER44111.1| peptide chain release factor 1 [Streptococcus suis A7]
Length = 359
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKEELKQAKADKEVYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
Max13]
gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
K40]
gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422297078|ref|ZP_16384722.1| peptide chain release factor 1 [Pseudomonas avellanae BPIC 631]
gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
gi|407991602|gb|EKG33422.1| peptide chain release factor 1 [Pseudomonas avellanae BPIC 631]
Length = 360
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y++ + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429]
gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096]
gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750]
gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str.
Manfredo]
gi|417856878|ref|ZP_12501937.1| peptide chain release factor 1 [Streptococcus pyogenes HKU
QMH11M0907901]
gi|119361619|sp|Q1JBR9.1|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361620|sp|Q1JLQ2.1|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361621|sp|Q1JGV2.1|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361622|sp|Q1J6M1.1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223610|sp|A2REH9.1|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus
pyogenes MGAS9429]
gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
pyogenes MGAS10270]
gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
pyogenes MGAS2096]
gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
pyogenes MGAS10750]
gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str.
Manfredo]
gi|387933833|gb|EIK41946.1| peptide chain release factor 1 [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 359
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDQKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTKKLESL 357
>gi|333898002|ref|YP_004471876.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333113267|gb|AEF18204.1| Peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 353
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 249/355 (70%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS KL+DPE + + E++K+A+ A L+E+V YR++K + +E
Sbjct: 1 MIDKLKAIEDRYVELSQKLSDPESMKDMDEWKKMAKEQAGLEEIVQKYREYKKVKDDIES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + D+E+ +M E+KSL + L ++K+LLLP DP D +++++E+RAGAG
Sbjct: 61 TKELIE---MDDELKDMAEDELKSLEEKEESLLNEIKLLLLPKDPNDEKDVIMEIRAGAG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+ E GGFK V+ I G YS+LK+ESG
Sbjct: 118 GEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PE ++V++ I+P DI++ RSGG GGQ+VN +
Sbjct: 178 VHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +ER+QLQN+ RA+++LRAKLYE+ E++ +I R QVGTG
Sbjct: 238 SAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEREISMTRKLQVGTG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + A +Q E LE +
Sbjct: 298 DRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQAERLESM 352
>gi|399054358|ref|ZP_10742889.1| peptide chain release factor 1 [Brevibacillus sp. CF112]
gi|433542756|ref|ZP_20499179.1| peptide chain release factor 1 [Brevibacillus agri BAB-2500]
gi|398047861|gb|EJL40363.1| peptide chain release factor 1 [Brevibacillus sp. CF112]
gi|432185947|gb|ELK43425.1| peptide chain release factor 1 [Brevibacillus agri BAB-2500]
Length = 358
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 245/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L + + +++++ L DP+V+S+ ++L++ A L+E V+TYR++K Q+++
Sbjct: 1 MFARLSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQASLEETVTTYREYKSVVSQIDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E +DE M EM+ EI L+ +LEE+LK+LLLP DP D +N+++EVR AG
Sbjct: 61 AKAMLEEKLDDE-MREMVKLEISELTGRKEQLEERLKILLLPKDPNDEKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY +++E++ +K ++ +S + GG+K +V + G YSK+K+ESG
Sbjct: 120 GDEAALFAAVLFRMYTRFAERHGFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTSTATV ++PEA++VEV + KDI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPATESGGRIHTSTATVLVLPEAEDVEVEVHEKDIRIDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q NK +AL++LRA+LY+ +++Q + R S VGTG
Sbjct: 240 SAVRVTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLYDYYMQQQNAEADATRKSLVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY +RVTDHR+ + L S L+G +D + + EQ ELL+ A S
Sbjct: 300 DRSERIRTYNYPQSRVTDHRIGLTLHRLESVLEGELDEVIDNLILHEQTELLKSHAHS 357
>gi|337754685|ref|YP_004647196.1| peptide chain release factor 1 [Francisella sp. TX077308]
gi|336446290|gb|AEI35596.1| Peptide chain release factor 1 [Francisella sp. TX077308]
Length = 361
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 252/358 (70%), Gaps = 8/358 (2%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
KL+S + +++SV L + +V+S+ ++++ L++ + L+ +V + FK+ + LE+
Sbjct: 7 VKLQSLIERHEEVSVLLGEADVISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKE 63
Query: 116 ALAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A + N D E+ EM E+KS +NE IE LE++L++LLLP DP D NI LE+RAG G
Sbjct: 64 AAYEMLNEKDAELVEMAKEELKS-ANEAIERLEDELQILLLPRDPNDDANIFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ +I G+ VYS+LK+ESG
Sbjct: 123 GDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISKINGDGVYSQLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I P DI++ T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDISPADIKVDTFRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R + VG+
Sbjct: 243 DSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATMSD 360
>gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
gi|333904931|ref|YP_004478802.1| peptide chain release factor 1 [Streptococcus parauberis KCTC
11537]
gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
gi|333120196|gb|AEF25130.1| peptide chain release factor 1 [Streptococcus parauberis KCTC
11537]
gi|456370910|gb|EMF49806.1| Peptide chain release factor 1 [Streptococcus parauberis KRS-02109]
gi|457095455|gb|EMG25939.1| Peptide chain release factor 1 [Streptococcus parauberis KRS-02083]
Length = 359
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V YRK+KD + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAGTRETVDVYRKYKDVIQAIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K++G D ++ EM E+K EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDSGGDSDIEEMAREELKESKAAKETYEEQLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E +W+ ++ ++ GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EV+ IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVDYQIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LE+L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIVDALVLYDQTQKLEDL 357
>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378952822|ref|YP_005210310.1| peptide chain release factor 1 [Pseudomonas fluorescens F113]
gi|423699274|ref|ZP_17673764.1| peptide chain release factor 1 [Pseudomonas fluorescens Q8r1-96]
gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359762836|gb|AEV64915.1| Peptide chain release factor 1 [Pseudomonas fluorescens F113]
gi|387996495|gb|EIK57825.1| peptide chain release factor 1 [Pseudomonas fluorescens Q8r1-96]
Length = 360
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVATYKQLLKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ ++L+ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
torques L2-14]
Length = 356
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 245/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++++ +L +P+V ++P ++KL + ++L +V Y+++K C++ +EE
Sbjct: 1 MFDRLEDLVIRYQEVMGELQEPDVANDPERFRKLMKEQSDLAPIVEAYQEYKKCKQNVEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E + EEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLMILEEESD-EEMRELAKEELNESKARIEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y++ WK +IS +E GGFK V I G YS++KYESG
Sbjct: 120 GDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKKQASEAAERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +L S L+G++D + S A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQTAKLAKMEE 356
>gi|395760366|ref|ZP_10441035.1| peptide chain release factor 1 [Janthinobacterium lividum PAMC
25724]
Length = 358
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 241/361 (66%), Gaps = 6/361 (1%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P ++ KL+ A +L L P+ SN Y+K+ + AEL +V+ YR C ++
Sbjct: 2 KPSMLAKLDQLANRLVELDELLMHPDATSNMDSYRKMTREHAELGPLVALYR----CYQE 57
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
+ A+E D +M + EI++ + LE +L+ +LLP D D RNI LE+RA
Sbjct: 58 AGDDITTAQEMLGDPDMKQFAQEEIEAAKATMARLERELQTMLLPKDVNDERNIFLEIRA 117
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDE+ ++AGDL+RMY +++E+N W+ L+SSS+++ GG++ V++ + GN YSKLK+
Sbjct: 118 GTGGDESALFAGDLLRMYSRFAERNRWQVELVSSSDSDLGGYREVIVRVVGNGAYSKLKF 177
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNV 289
ESG HRVQRVP TE QGR+HTS TVA+MPEADEVE V I+P D+ + T R+ GAGGQ++
Sbjct: 178 ESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHI 237
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NK ++A+ + H PTGI + C ++R+Q +NK++A+++L A++ ++++REQQ K R S
Sbjct: 238 NKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLREQQSKEAATRKSL 297
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+G+G R+E+IRTYN+ R+TDHR+ + ++L +DG++ + AA Q ELL L
Sbjct: 298 IGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDFIMDGDLTELTNALAAEHQAELLAALG 357
Query: 409 E 409
+
Sbjct: 358 D 358
>gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
2CP-C]
gi|119361506|sp|Q2IMW2.1|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 370
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 241/359 (67%), Gaps = 3/359 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M P ++ KLE+ + +++L+ L+DP V N ++K+A+ A +++ V+ R ++
Sbjct: 1 MLSPDVLKKLEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ + AL + D E+ E+ E+ L ++ EE+LK+ L+P DP D +++++E+
Sbjct: 61 DDVAGNEALLGDK--DPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAG++A +++RMY +Y+E+ W+ L+ +S GG K + + G+ VYS L
Sbjct: 119 RAGAGGDEAGLFAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TEAQGR+HTST TVA+MPEA+E++V ++P D+E+ RS G+GGQ+
Sbjct: 179 KYESGVHRVQRVPATEAQGRIHTSTVTVAVMPEAEEIDVQVNPADVEMDVFRSTGSGGQS 238
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ++A+ L HKPTGI + C +E++QL+N++ A+++LRAKL+EI+ Q+ R S
Sbjct: 239 VNTTDSAVRLTHKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARDATRKS 298
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
QVGTG R+EKIRTYN+ +R+TDHR+ L + +DG++ + + +C + L E
Sbjct: 299 QVGTGDRSEKIRTYNFPQDRLTDHRVNYTRHNLPAVMDGDVQDVIDACRTFYAAQALRE 357
>gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
gi|32171547|sp|Q8DZM4.1|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
Length = 359
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEASTRETVTAYREYKQVIQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEAL 357
>gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
Length = 364
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 238/359 (66%), Gaps = 5/359 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KL S + +L +A P+V ++P Q+ A+ EL+ +V YR ++D E+Q+E+
Sbjct: 5 LIDKLASITARYDELLDLMAQPDVATDPVRLQRYAREQRELEPLVEAYRAYRDVERQIED 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L E+ D+++ ++ E+ L +LE+++KVLLLP DP D++N ++E+R G G
Sbjct: 65 TSFLL-EHETDQDVRQLAQDELDHLLERRAQLEQQIKVLLLPRDPNDSKNAIMELRQGEG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+EQ W +IS++E GG+K ++ E++G YS+LKYE G
Sbjct: 124 GDEAALFAADLFRMYTRYAEQRGWDIEVISATENGPGGYKEIIFEVRGEGAYSRLKYEGG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA+GR+HTSTATVA++PE +E ++ ++P D + RSGG GGQ VN +
Sbjct: 184 VHRVQRVPATEARGRIHTSTATVAVLPEVEETDIELNPSDYRVDVFRSGGHGGQGVNTTD 243
Query: 294 TAIDLFHKPTG---IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
+A+ + +KP I + C + R+QL+NK+ AL +LRA+LY + ++++++ RL+QV
Sbjct: 244 SAVRIVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKELGETRLAQV 303
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G G RAEKIRTYN+ +RVTDHR+ NF L LDG++D + + E LE +A
Sbjct: 304 GAGERAEKIRTYNFPQDRVTDHRIGQNFSNLPGILDGDLDRLIDMLIIADNAERLESVA 362
>gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
gi|339301468|ref|ZP_08650568.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC
13813]
gi|417005318|ref|ZP_11943911.1| peptide chain release factor 1 [Streptococcus agalactiae FSL
S3-026]
gi|421147291|ref|ZP_15606981.1| peptide chain release factor 1 [Streptococcus agalactiae GB00112]
gi|32171550|sp|Q8E5C3.1|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC
13813]
gi|341577131|gb|EGS27539.1| peptide chain release factor 1 [Streptococcus agalactiae FSL
S3-026]
gi|401685969|gb|EJS81959.1| peptide chain release factor 1 [Streptococcus agalactiae GB00112]
Length = 359
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEAL 357
>gi|390933445|ref|YP_006390950.1| Peptide chain release factor 1 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568946|gb|AFK85351.1| Peptide chain release factor 1 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 353
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 249/355 (70%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS KL+DPE + + E++++A+ A L+E+V YR++K + +E
Sbjct: 1 MIDKLKAIEDRYVELSQKLSDPESMKDMDEWKRMAKEQAGLEEIVQKYREYKKVKDDIES 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + D+E+ +M E+KSL + L ++K+LLLP DP D +++++E+RAGAG
Sbjct: 61 TKELIE---TDDELKDMAEEELKSLEEKEESLLNEIKLLLLPKDPNDEKDVIMEIRAGAG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+ E GGFK V+ I G YS+LK+ESG
Sbjct: 118 GEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PE ++V++ I+P DI++ RSGG GGQ+VN +
Sbjct: 178 VHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +ER+QLQN+ RA+++LRAKLYE+ E++ +I R QVGTG
Sbjct: 238 SAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEREISMTRKLQVGTG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + A +Q E LE +
Sbjct: 298 DRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQAERLESM 352
>gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
Length = 386
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 232/348 (66%), Gaps = 1/348 (0%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
E LI K E A +++L+ +L DP V++ P KL + EL+E + + + +KQ
Sbjct: 28 EDGLIKKWEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKKQ 87
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
LE+ AL ++ +M ++ A E L +++E+E + K L P DP D +N+ LE+RA
Sbjct: 88 LEDVSALLQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIRA 147
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA ++AGDL RMY KY+E+N K ++ +SE GG++ V+ ++G Y +L+Y
Sbjct: 148 GTGGDEAALFAGDLFRMYLKYAERNRLKLEVVDASETGIGGYREVIALLEGKGAYGRLRY 207
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP TEA GR+HTST TVA+MPE DEVEV IDPKD+ + T S GAGGQ+VN
Sbjct: 208 ESGVHRVQRVPTTEASGRIHTSTVTVAVMPEVDEVEVHIDPKDLRIDTFCSSGAGGQSVN 267
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
+A+ + H PTG+ + C +ER+QL+N+++A++ LRA++ E + +Q+ +I R SQV
Sbjct: 268 TTYSAVRITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQEAEIAQNRKSQV 327
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAA 397
GTG R+EKIRTYN+ NRVTDHR+ + +L L G+++ VQ+ A
Sbjct: 328 GTGDRSEKIRTYNFPQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRA 375
>gi|339627091|ref|YP_004718734.1| peptide chain release factor RF1 [Sulfobacillus acidophilus TPY]
gi|339284880|gb|AEJ38991.1| peptide chain release factor RF1 [Sulfobacillus acidophilus TPY]
Length = 375
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 235/337 (69%), Gaps = 3/337 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+ ESA + +L ++A+P V SNP +K Q +AE +++V TY + E LE ++
Sbjct: 25 RCESAKARYLELQEEMANPTVASNPELARKYGQELAEAEQLVHTYEAYVAAEADLEVAKD 84
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+A+++ D E + SE++ L L E +++ LL P DP D++N+++E+R GAGGDE
Sbjct: 85 MARDD--DPEARQWAESEVERLRQALDRWEREIQQLLAPRDPNDSKNVIMEIRGGAGGDE 142
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A +L RMY +++E++ W+ ++SSS + GGFK ++ I+G YS LKYESGVHR
Sbjct: 143 AALFAAELYRMYVRFAERHGWRTEVLSSSPTDIGGFKEIIFMIEGRGAYSLLKYESGVHR 202
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEAQGR+HTST TVA++PEA+E +VVI+P ++ + T R+ GAGGQ+VNK E+A+
Sbjct: 203 VQRVPVTEAQGRIHTSTVTVAVLPEAEETDVVINPDELRIDTQRASGAGGQHVNKTESAV 262
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI ++C +E++QL+N+ +A+++LR++L ++ E IR +R SQVGTG R+
Sbjct: 263 RITHLPTGIVVYCQDEKSQLKNREKAMRILRSRLQDLYETEAANAIRDERRSQVGTGDRS 322
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAV 392
E+IRTYN+ RVTDHR+ + + + LDG++D +
Sbjct: 323 ERIRTYNFPQGRVTDHRIGLTLHRIEAILDGDLDELI 359
>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
gi|387154537|ref|YP_005703473.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
gi|61214640|sp|Q727E1.1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223554|sp|A1VAK8.1|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
vulgaris DP4]
gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
Length = 357
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 246/358 (68%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE+ ++DL +L+ EV ++ Y+KL ++ A+L +VV +R++K+ ++ L +
Sbjct: 1 MFAKLENLELKFEDLEQQLSSAEVFNDQDRYRKLTKAHADLKQVVDAFRRYKEMKQNLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L ++ D E+ M EIK++ L ++E++LK+LLLP DP+D +NI+LE+RAG G
Sbjct: 61 NKELLGDS--DHEIRAMAHEEIKAIEAALPDIEQELKILLLPRDPMDDKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E WK ++S+S+++ GG+K ++ I G++VYS+LKYESG
Sbjct: 119 GEEASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TEAQGR+HTS ATVA+MPEA+EV+V I P D+ + R+ GAGGQ+VNK E
Sbjct: 179 THRVQRVPATEAQGRIHTSAATVAVMPEAEEVDVDIRPDDLRIDVYRASGAGGQHVNKTE 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK++A+++L +++ + + I R + VG+G
Sbjct: 239 SAVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERAHSVIADARRALVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY +R+TDHR+ + + L ++G + V + Q E L+ A++
Sbjct: 299 DRSERIRTYNYPQSRITDHRINLTLYSLDKVMEGELAPLVDALVTHAQTEALKAQADA 356
>gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1]
gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp.
RS-1]
Length = 364
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 235/359 (65%), Gaps = 5/359 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KL + A + +L +A PE+ ++P Q+ + +L+ +V Y+ ++D E+Q+E+
Sbjct: 5 LIDKLANVAARYNELLDLMAQPEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVERQIED 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L N D E+ ++ E+ L LE +KVLLLP DP D++N+++E+R G G
Sbjct: 65 TRFLLA-NETDPEVRQLAQEELDHLIERRARLETDIKVLLLPRDPNDSKNVIMELRQGEG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y+EQ W +IS++E GG+K +V EIKG YS+LKYE G
Sbjct: 124 GDEAALFAADLFRMYTRYAEQRGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLKYEGG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA+GR+HTSTATVA++PE +E E+ ++P D + RS G GGQ VN +
Sbjct: 184 VHRVQRVPATEARGRIHTSTATVAVLPEIEETEIELNPSDYRVDVFRSSGHGGQGVNTTD 243
Query: 294 TAIDLFHKPTG---IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
+A+ + +KP I + C + R+QL+NK+ AL +LRA+LY + ++++++ RL+QV
Sbjct: 244 SAVRIVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKELGESRLAQV 303
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G G RAEKIRTYN+ +RVTDHR+ NF L LDG++D + + + E LE +A
Sbjct: 304 GAGERAEKIRTYNFPQDRVTDHRIGQNFSNLPGILDGDLDRLIDALIIADNAERLEAVA 362
>gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
33300]
gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
33300]
Length = 357
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 240/354 (67%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + W+++ +L++P+ +S+ + KL + +L ++V Y +K+ ++
Sbjct: 1 MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLGKIVDQYHIYKNMVSNIDA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N D+E+ EM E+ L + E EE+++++L+P DP DA+N ++E+R G G
Sbjct: 61 NKDILA-NEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY ++ E W+ ++ +E GG+K V++++ G+ Y +LKYESG
Sbjct: 120 GDEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGDDAYGQLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTS A+VA++PEA++V+V ++P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+GI + C ER+QL N+ A+++LR KLYE++V+++ +R + V TG
Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKKHGDTAAKRKTMVSTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+ K+RTYNY RVT+HR+ + + L + +DG+I + + E E ++E
Sbjct: 300 DRSAKVRTYNYPQGRVTEHRIGLTLYNLPAVMDGDIQGIIDALQFAENAEKMKE 353
>gi|389856641|ref|YP_006358884.1| peptide chain release factor 1 [Streptococcus suis ST1]
gi|353740359|gb|AER21366.1| peptide chain release factor 1 [Streptococcus suis ST1]
Length = 359
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE D ++ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEASGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
gi|423335983|ref|ZP_17313734.1| peptide chain release factor 1 [Lactobacillus reuteri ATCC 53608]
gi|238058717|sp|B2G676.1|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
gi|337729186|emb|CCC04310.1| peptide chain release factor 1 [Lactobacillus reuteri ATCC 53608]
Length = 360
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K + + +
Sbjct: 4 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L +E ND+++ + E+ E +LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 64 DEELLRET-NDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ WK ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 123 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q +R +GTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQQEQSAYDQKRKDAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G++D +++ +Q + LE+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQTQKLEQL 357
>gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016]
gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
gi|338204026|ref|YP_004650171.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
reuteri DSM 20016]
gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
gi|336449266|gb|AEI57881.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
Length = 362
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K + + +
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQTISD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L +E ND+++ + E+ E +LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEELLRET-NDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ WK ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+VNK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q +R +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQQEQSAYDQKRKDAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G++D +++ +Q + LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQTQKLEQL 359
>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
gi|166223588|sp|Q1IEX1.1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
Length = 360
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ +++L+ L D EV+S+ + ++ ++ AE++ V++ Y ++ + LE
Sbjct: 5 LLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIACYVGWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDA--DPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|345859347|ref|ZP_08811697.1| peptide chain release factor 1 [Desulfosporosinus sp. OT]
gi|344327494|gb|EGW38922.1| peptide chain release factor 1 [Desulfosporosinus sp. OT]
Length = 356
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 243/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + +L+ L+DPE+++N SE+QK A++ A + +++ +R+++ + +E+
Sbjct: 1 MLEKLYEIERKYDELTELLSDPEILANQSEWQKYAKAQAGMTNLITAFREYQAVLRGIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L KE D +M EM E+ L ++ +ELEEK++V LLP DP D +N+++E+RAGAG
Sbjct: 61 TENLLKEK-LDSDMQEMAEQELDELRSQSLELEEKMRVFLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY +Y+E WK ++S+S + GG+K ++ ++G +SKLK+ESG
Sbjct: 120 GDEAALFAGDLYKMYTRYAEGQGWKTEVLSASYTDIGGYKEIIFLVEGYGAFSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA+EVEV I+P D+ + S G GGQ VN +
Sbjct: 180 VHRVQRIPSTESGGRIHTSTATVAVLPEAEEVEVSINPNDLRIDIFCSSGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C +E++QL+NK +AL++LRA++ E E + ++R SQVGTG
Sbjct: 240 SAVRITHLPTGIIASCQDEKSQLKNKEKALRVLRARILEKAQEEASGEQASERRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRT+N+ RVTDHR+ + L + L G+++ +Q+ +Q E L
Sbjct: 300 DRSERIRTFNFPQGRVTDHRIGLTLHRLETILTGDLEEIIQALITSDQAERL 351
>gi|388470749|ref|ZP_10144958.1| peptide chain release factor 1 [Pseudomonas synxantha BG33R]
gi|388007446|gb|EIK68712.1| peptide chain release factor 1 [Pseudomonas synxantha BG33R]
Length = 360
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLSKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+N D +M EM E++ +L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDN--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316921|ref|YP_006013085.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|408401559|ref|YP_006859522.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410494646|ref|YP_006904492.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417751174|ref|ZP_12399503.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417927437|ref|ZP_12570825.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333773038|gb|EGL49822.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340765311|gb|EGR87837.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407967787|dbj|BAM61025.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410439806|emb|CCI62434.1| Peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 359
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + L++ A + V+TYR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDSELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQTQKLESL 357
>gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium
thermophilum]
Length = 357
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 238/340 (70%), Gaps = 2/340 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + ++ L+ +L+DPEVV++ + Y KLA+ +EL EVV +R+++ E L
Sbjct: 1 MFDKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLAS 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L E D EM + EI L + + + +L+ LL P DP D +N++LE+RAG G
Sbjct: 61 ARELLNE-AEDAEMVALAREEIALLEKQRAQCQLELEQLLTPKDPNDRKNVLLEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L+RMY +Y+E+ W+ ++ S +E GG K ++ I+G VYS+LK+ESG
Sbjct: 120 GNEASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKHESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PEA+EV++ IDPKD+ + T S G GGQ+VN
Sbjct: 180 VHRVQRVPVTESAGRIHTSTVTVAVLPEAEEVDIEIDPKDVRIDTFCSSGPGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + +E++Q++N+ +A ++LRA+L E++ ++Q E I +R +QVGTG
Sbjct: 240 SAVRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHEAIAGERRAQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAV 392
R+EKIRTYN+K+NRVTDHR+ + +L + +DG +D +
Sbjct: 300 ERSEKIRTYNFKENRVTDHRIGLTLHQLDTIMDGELDGLI 339
>gi|310659436|ref|YP_003937157.1| peptide chain release factor RF-1 [[Clostridium] sticklandii]
gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [[Clostridium] sticklandii]
Length = 356
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 246/354 (69%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E + +K+L+ K++DPEV++N S +QKL + AE++ VV YR++K + Q E
Sbjct: 1 MFDKIEFVEEKYKELNQKISDPEVINNQSLWQKLMKEHAEIEPVVMKYREYKTVKSQFEG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E+ NDEEM E+ E+ L L + E+L+VLLLP DP D +N+++E+RAGAG
Sbjct: 61 AKEIL-ESSNDEEMRELAKMELSELEESLEAVSEELRVLLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AG L RMY Y+ WK L+SS++ GG+K VV I G YS+LK+ESG
Sbjct: 120 GDEAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMIIGKGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP+TE+ GR+HTSTATVA++P + EV ++ D+ + RS G GGQ+VN
Sbjct: 180 VHRVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDVFRSSGNGGQSVNTT 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ L H PTGI I +E++QL+NK +A ++LRAKLY+I++ + Q+++ +R SQVGT
Sbjct: 240 DSAVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEKAQKEVARERKSQVGT 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+E+IRTYNY R+TDHR+ + ++L +FL+G++D V + +Q E ++
Sbjct: 300 GDRSERIRTYNYPQGRITDHRIGVTLYKLDAFLNGDLDEMVDALITTDQTEKMQ 353
>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
Length = 360
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 244/355 (68%), Gaps = 2/355 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L+ L+DP+V+++ ++ LA+ A+L V T++ +K+ +E++
Sbjct: 5 QLDTFIARYQELAELLSDPDVINDHKRFRDLAKEEADLRPKVGTFKHYKEVVSGIEDTEE 64
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L KE ++E+M E+ SE+ L E +LEE++KVL+LPSDP D +NI++E+R AGGDE
Sbjct: 65 LIKET-SEEDMLELAKSELDQLKAERDDLEEEIKVLMLPSDPNDDKNIIMEIRGAAGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL MY +Y+E W + +S + GG+K ++++I G++VYSKLKYESG HR
Sbjct: 124 AQLFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKVYSKLKYESGAHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE+QGRVHTSTATV +MPE ++++ ID KDI R+ GAGGQ+VNK +A+
Sbjct: 184 VQRVPKTESQGRVHTSTATVGVMPELEDLDFEIDEKDIRTDIYRASGAGGQHVNKTSSAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI++ ++R+Q QN+ +A+ +LR+++Y+ ++Q++ +R + VGTG R+
Sbjct: 244 RMTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVYDYYQSQEQDEYDEKRKNLVGTGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
E+IRTYNY NRVTDHR+ + + L + G +D + + +Q + LEEL E+
Sbjct: 304 ERIRTYNYPQNRVTDHRINLTLQKLDRIMGGELDEIIDALILADQAQKLEELNET 358
>gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA]
gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA]
Length = 358
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 239/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ ++++ +L +P V N +QKL + ++L +V YR++K ++ +++
Sbjct: 1 MFDKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S ++ +E DE+M EM+ E+ + ELE +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLSMLEEE-KDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY KY+E WK ++S +E GGFK V I G YS+LKYESG
Sbjct: 120 GDEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+E++ +D D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTCTVAIMPEAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++QL+NK +AL++LR++LYE+++ +Q + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHDAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+K+ L + L+G++D + S A +Q L L ++
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIAADQAAKLSNLQDA 357
>gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
35098]
gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
35098]
Length = 358
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 236/358 (65%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +E + +KDL K+ DPEV+++ S K+ + L +V Y + KD E +EE
Sbjct: 1 MFENIEHIKENYKDLEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D++M +M+ EIK L + E++K+LL+P DP D+R++++E+R GAG
Sbjct: 61 NKELINE-ADDQDMIDMLKEEIKENEKLLDQYNEEMKILLIPKDPNDSRDVIVEIRPGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AGDL RMY Y+++ +K + + GG K ++G YS+ KYESG
Sbjct: 120 GDEAGLFAGDLYRMYHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PE DE++V +DP DI RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEVDELDVHVDPNDIRTDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +E++Q++NK +A+++L A++YE++ ++ ++I R SQVGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKEIADNRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ K ++L FL+G I + S A +Q LE++ E
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIAEDQTRKLEKIGED 357
>gi|406913012|gb|EKD52501.1| hypothetical protein ACD_62C00003G0011 [uncultured bacterium]
Length = 353
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 241/353 (68%), Gaps = 4/353 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ TKLE + ++DL+ ++A + P + +A+ A L E V+TYR++K ++L E
Sbjct: 1 MFTKLEQVEQKFEDLTQRMASGTLA--PRDLTAMAKEQARLRETVTTYREYKKNTQELAE 58
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S++L E D++M M E+ L E E+KLK+LL+P+DP D +NI+LE+RAG G
Sbjct: 59 SKSLL-EKEKDDDMRVMAREEVTKLEKRQSEFEKKLKLLLIPTDPNDEKNIILEIRAGTG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EAG++ DL RMY ++++ WK ++SS+E +KGGFK ++ + G+RVYSKLKYESG
Sbjct: 118 GEEAGLFVADLFRMYTRFADSQGWKIDIVSSNETDKGGFKEIIAMVTGDRVYSKLKYESG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
+HRVQRVP TEA GR+HTS +VAI+PEA+++E+ I P D+ + R+GGAGGQ+VNK E
Sbjct: 178 IHRVQRVPDTEASGRIHTSAVSVAILPEAEDIELDIPPTDLRIDVMRAGGAGGQHVNKTE 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PT + + C ++R+Q +NK++A+++LR++L + +EQ + +R + VG+G
Sbjct: 238 SAVRITHLPTNLVVVCMDDRSQHKNKAQAMKILRSRLLDKMQQEQHAEEAQKRKTMVGSG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+EKIRTYN+ +RVTDHR+ + L + L+G+++ A Q E ++
Sbjct: 298 DRSEKIRTYNFPQSRVTDHRIGLTVHALDAVLNGDLNRLCDPLQAYYQAEAMK 350
>gi|422758843|ref|ZP_16812605.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 359
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 233/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPEVVS+ + L++ A + V+TYR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDANGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQTQKLESL 357
>gi|384082296|ref|ZP_09993471.1| peptide chain release factor 1 [gamma proteobacterium HIMB30]
Length = 362
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P L+++L+ ++L+ LADPEV+ N +++ +Q +E++ VV +K++ L
Sbjct: 3 PSLLSRLDQLVDRHEELAALLADPEVIGNQTQFVAFSQEYSEIEPVVQLVQKYRVLSADL 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E + +G+D +M E+ SE+ +L L+ +LKV L+P DP D+R+ +E+RAG
Sbjct: 63 VELESYL--SGDDADMRELADSELPDTRQQLEALDAELKVALIPKDPADSRSAFVEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA ++AGDL RMY K++E WK ++S S+AE GG+K VVM++ G+RVY +LK+E
Sbjct: 121 TGGDEAALFAGDLSRMYLKFAETQGWKTEVLSESKAELGGYKEVVMKVAGDRVYGRLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE+QGR+HTS TVA+M EAD + E ID KD+ + T R+ GAGGQ+VN
Sbjct: 181 SGAHRVQRVPATESQGRIHTSACTVAVMAEADPMAETTIDTKDLRIDTFRASGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H PTG+ + C +ER+Q +NK+RAL LL+A+L + +EQQ K ++R S V
Sbjct: 241 KTDSAIRITHLPTGVVVECQDERSQHKNKARALSLLQARLEDAARQEQQAKEASERKSLV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
G+G R+E+IRTYN+ RVTDHR+ + + L +DG + Q ELL L
Sbjct: 301 GSGDRSERIRTYNFPQGRVTDHRINLTLYRLDEMMDGACQMIIDPLVQEYQAELLAGL 358
>gi|392331521|ref|ZP_10276136.1| peptide chain release factor 1 [Streptococcus canis FSL Z3-227]
gi|391419200|gb|EIQ82012.1| peptide chain release factor 1 [Streptococcus canis FSL Z3-227]
Length = 359
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 234/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRDTVTAYREYKQVIQAIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K + EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQK++E W+ ++ +S GG K VV+ + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLSMYQKFAESQGWRFEVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQMAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D+ V + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDDIVDALVMYDQTQKLESL 357
>gi|386010393|ref|YP_005928670.1| protein PrfA [Pseudomonas putida BIRD-1]
gi|395447154|ref|YP_006387407.1| PrfA [Pseudomonas putida ND6]
gi|397693751|ref|YP_006531631.1| peptide chain release factor 1 [Pseudomonas putida DOT-T1E]
gi|421524618|ref|ZP_15971239.1| peptide chain release factor 1 [Pseudomonas putida LS46]
gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
gi|388561151|gb|AFK70292.1| PrfA [Pseudomonas putida ND6]
gi|397330481|gb|AFO46840.1| Peptide chain release factor 1 [Pseudomonas putida DOT-T1E]
gi|402751081|gb|EJX11594.1| peptide chain release factor 1 [Pseudomonas putida LS46]
Length = 360
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE +++L+ L D EV+S+ + ++ ++ AE++ V + Y++++ + LE
Sbjct: 5 LLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGRVHTS TVA++PE DE + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAALGD 360
>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
gi|166223564|sp|A6SUF6.1|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
Length = 360
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 241/362 (66%), Gaps = 6/362 (1%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P ++ KL+ + +L+V L + SN Y+K+ + AEL +V+ Y ++ +
Sbjct: 2 KPSMLAKLDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADSD 61
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
+++++ + +D +M E EI + + +LE L+ +LLP DP D RNI LE+RA
Sbjct: 62 IQDAQGML----SDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRA 117
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA ++AGDL+RMY +++E+N W+ ++S S +E GG+K V++ I G YSKLK+
Sbjct: 118 GTGGDEAALFAGDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKF 177
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNV 289
ESG HRVQRVP TE QGR+HTS TVAIMPEADEVE V I+P D+ + T R+ GAGGQ++
Sbjct: 178 ESGGHRVQRVPATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHI 237
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NK ++A+ + H PTGI + C ++R+Q +NK+ AL++L A++ ++++REQQ K R S
Sbjct: 238 NKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSKEAATRKSL 297
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+G+G R+E+IRTYN+ R+TDHR+ + ++L +DG++ + AA Q ELL L
Sbjct: 298 IGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQAELLAALG 357
Query: 409 ES 410
++
Sbjct: 358 DA 359
>gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
Length = 358
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 238/354 (67%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L A ++ LS L DP+V +P ++ ++ + L E + ++K +QL++
Sbjct: 1 MLDRLSVLADRYEKLSELLCDPDVAGDPKRLREYSKEQSSLQEAYEAFTEYKQVCEQLDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E +DE M EM+ EI L L+E++++LLLP DP D +N+++E+R AG
Sbjct: 61 AKLMLGEKLDDE-MREMVKMEIGELDERKTALDERIRILLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY KY++ W+ L+ +E++ GGFK VV I G YSKLK+ESG
Sbjct: 120 GDEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMIIGKGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTST+TVA+MPE +EV++ I KDI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPATESGGRIHTSTSTVAVMPEIEEVDIEIHDKDIRIDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C + ++Q +NK++ALQ+LRA++YEI +E++ K +R S+VGTG
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIYEIHRQEEEAKYAGERKSKVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY +RVTDHR+ + L + ++G+I+ VQ+ EQ ELLE+
Sbjct: 300 DRSERIRTYNYPQSRVTDHRIGLTLHRLDAIMNGDIEEIVQTLTITEQAELLEQ 353
>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
Length = 361
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 237/345 (68%), Gaps = 3/345 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L + ++++ K+ DP V SN E L + A+L VV +++++ E L E+++
Sbjct: 9 RLAEIEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEYRQVEAGLAEAKS 68
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L E+ D EMAE+ E S L E+E +L LLP DP D +++++E+RAG GGDE
Sbjct: 69 L--EDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDVIVEIRAGTGGDE 126
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY ++ E+ W+ ++ +E E GG+K +V ++KG YSKLK+ESGVHR
Sbjct: 127 ASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGVHR 186
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS ATVA+MP+A++VE+ I P+D+++ T RS GAGGQ+VN ++A+
Sbjct: 187 VQRVPATEASGRIHTSAATVAVMPQAEDVEIEIRPEDLDIDTYRSSGAGGQHVNMTDSAV 246
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ HKPTG+ + C +ER+Q++N+++A+ +LRA+LY+++++++Q + + R +G+G R+
Sbjct: 247 RITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSEEASTRRGMIGSGDRS 306
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
E+IRTYN+ NRVTDHR+ + ++L LDG+I + + +Q
Sbjct: 307 ERIRTYNFPQNRVTDHRIGLTLYKLDYMLDGDIYEMIDALTMADQ 351
>gi|423316082|ref|ZP_17293987.1| peptide chain release factor 1 [Bergeyella zoohelcum ATCC 43767]
gi|405584776|gb|EKB58658.1| peptide chain release factor 1 [Bergeyella zoohelcum ATCC 43767]
Length = 361
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 240/350 (68%), Gaps = 3/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE+ + + +++ + P+V+S+ Y +L + ++L ++V Y ++K+ + E
Sbjct: 5 LVPKLEAIKQRYNEVADLIIQPDVISDQKRYGQLNKEYSDLGKIVKVYEEYKNALDTITE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +G+D+++ ++ E + + LEE+LKVLL+P DP D +N+++E+RAG G
Sbjct: 65 SDEIIA-DGSDKDLVDLAKMEKLEAQDRIPSLEEELKVLLIPKDPADDKNVIVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+ D+ RMY Y + W+ + S+EA KG +K ++M+++G+ VY +K+ESG
Sbjct: 124 GDEAAIFVEDVYRMYAMYFKTKGWRHEITDSNEASKG-YKELIMKVEGDGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+GI + C + R+QL N+ A+++LRAKLY+IK++E I QR + V TG
Sbjct: 243 TKVQLTHKPSGIVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVVGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKE 402
R+ KI+TYNY RVTDHR+ K + L ++++G+I + + E E
Sbjct: 303 DRSAKIKTYNYPQGRVTDHRINKSIYNLDAYMNGDIQEMIDAVIMAENAE 352
>gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1]
gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
gi|419758333|ref|ZP_14284650.1| peptide chain release factor 1 [Oenococcus oeni AWRIB304]
gi|419856540|ref|ZP_14379261.1| peptide chain release factor 1 [Oenococcus oeni AWRIB202]
gi|419859298|ref|ZP_14381953.1| peptide chain release factor 1 [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421184725|ref|ZP_15642141.1| peptide chain release factor 1 [Oenococcus oeni AWRIB318]
gi|421188250|ref|ZP_15645589.1| peptide chain release factor 1 [Oenococcus oeni AWRIB419]
gi|421189169|ref|ZP_15646488.1| peptide chain release factor 1 [Oenococcus oeni AWRIB422]
gi|421191872|ref|ZP_15649142.1| peptide chain release factor 1 [Oenococcus oeni AWRIB548]
gi|421192734|ref|ZP_15649987.1| peptide chain release factor 1 [Oenococcus oeni AWRIB553]
gi|421195047|ref|ZP_15652259.1| peptide chain release factor 1 [Oenococcus oeni AWRIB568]
gi|421196916|ref|ZP_15654097.1| peptide chain release factor 1 [Oenococcus oeni AWRIB576]
gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni
PSU-1]
gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
gi|399904955|gb|EJN92406.1| peptide chain release factor 1 [Oenococcus oeni AWRIB304]
gi|399965807|gb|EJO00373.1| peptide chain release factor 1 [Oenococcus oeni AWRIB419]
gi|399966327|gb|EJO00876.1| peptide chain release factor 1 [Oenococcus oeni AWRIB318]
gi|399970693|gb|EJO04984.1| peptide chain release factor 1 [Oenococcus oeni AWRIB548]
gi|399973926|gb|EJO08090.1| peptide chain release factor 1 [Oenococcus oeni AWRIB422]
gi|399974312|gb|EJO08475.1| peptide chain release factor 1 [Oenococcus oeni AWRIB553]
gi|399976235|gb|EJO10261.1| peptide chain release factor 1 [Oenococcus oeni AWRIB576]
gi|399976831|gb|EJO10844.1| peptide chain release factor 1 [Oenococcus oeni AWRIB568]
gi|410496847|gb|EKP88326.1| peptide chain release factor 1 [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410499585|gb|EKP91016.1| peptide chain release factor 1 [Oenococcus oeni AWRIB202]
Length = 357
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 236/357 (66%), Gaps = 7/357 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ ++++ + +L+ LADP+V S+ +Y + A+ + E+ +V YR+++ ++ +
Sbjct: 4 IFAQIQNVVDRYDELNELLADPDVASDSGKYTRYAKELGEITPIVENYRRYQQLTNEIND 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L ND+EMA + E+ L E EL EKL+VL++P DP D +NI++E+R G
Sbjct: 64 DKELL----NDKEMASLAKKELSELEPEQSELSEKLRVLMIPKDPNDDKNIIMEIRGAVG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y++ +W ++ + E GGFK V+ I G VYSKLK+ESG
Sbjct: 120 GDEANLFAGDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINISGENVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEV--VIDPKDIELTTARSGGAGGQNVNK 291
HRVQRVP TE QGRVHTSTATV +MPE ++++ +IDPKD+ RS GAGGQ++NK
Sbjct: 180 AHRVQRVPVTETQGRVHTSTATVGVMPEFEDIDTEGLIDPKDVREDVYRSSGAGGQHINK 239
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
+A+ L H PTGI++ E+R+Q QN+S+A Q+LR+++Y+ +E +E+ QR +++G
Sbjct: 240 TSSAVRLVHLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQENREQYDQQRRTKIG 299
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+G R+E+IRTYN+ NRVTDHR+ +L ++G+++ + + +Q + LEE+
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRINFTLNKLDKVINGDLEEIIDALIIADQTKRLEEM 356
>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
Length = 356
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 240/358 (67%), Gaps = 6/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + ++ +L+ L+ + S+ Y+K+++ AE+ +V YR ++ CE L+E
Sbjct: 1 MLKKLATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ D EM EI++ L E+ L+ LLLP DP D RNI LE+RAG G
Sbjct: 61 AHAMLA----DPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++AGDL RMY +Y+E+ WK ++S+SE+E GG+K ++ +I+G YSKLK+ESG
Sbjct: 117 GDESALFAGDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE QGR+HTS TVA++PE DEV +V I+P DI + T R+ GAGGQ++NK
Sbjct: 177 GHRVQRVPETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKT 236
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTGI + C + R+Q NK++A+Q+L A++ +V EQQ KI ++R S +G+
Sbjct: 237 DSAVRITHFPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVNEQQSKIASERRSLIGS 296
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY R+TDHR+ + +++ + +G++D + + A Q +LL L E
Sbjct: 297 GDRSERIRTYNYPQGRITDHRINLTLYKIDAITEGDMDELINALANEHQADLLATLGE 354
>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254790877|sp|B8J4R4.1|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 356
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 235/352 (66%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE K + +L LA P+V ++ +Y+KL ++ A+L +VV +R+ + ++L E
Sbjct: 1 MFAKLEGLEKKYLELEEALAQPDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L + D E+ M E+ EL LE +LKV+LLPSDPLD +N +LE+RAG G
Sbjct: 61 NRLLLHDE--DPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E +WK ++S S +E GG+K ++ I G+RVYS LK+E+G
Sbjct: 119 GEEAALFAADLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TEAQGR+HTS ATVA+MPEA+EV+V I P+D+ + R+ GAGGQ+VNK E
Sbjct: 179 THRVQRVPATEAQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTE 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PT + C +ER+Q +NK+RA+++L +++ + Q ++ R +QVG+G
Sbjct: 239 SAVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQSSELSADRKAQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ R TDHR+ + + L ++G +++ V++ Q E L
Sbjct: 299 DRSERIRTYNFPQGRCTDHRINLTLYSLDRIMEGELESLVEALGTAAQAEAL 350
>gi|433656140|ref|YP_007299848.1| peptide chain release factor 1 [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433294329|gb|AGB20151.1| peptide chain release factor 1 [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 353
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 248/355 (69%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL++ + +LS KL+DPE + + E++K+A+ A L+E+V YR++K ++
Sbjct: 1 MIDKLKTIEDRYVELSQKLSDPEAMKDMDEWKKMAKEHASLEEIVQKYREYKKVLDDIKS 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + + + ++MA+ ++ N+L ++K+LLLP DP D +++++E+RAGAG
Sbjct: 61 TKEIIEMDDDLKDMAQEELKSLEEKENKL---LNEIKLLLLPKDPNDEKDVIMEIRAGAG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY Y+E+ WK ++SS+ E GGFK V+ I G YS+LK+ESG
Sbjct: 118 GEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TEA GR+HTSTATVA++PE ++V+V I+P DI++ RSGG GGQ+VN +
Sbjct: 178 VHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDVEINPNDIKIDVFRSGGHGGQSVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +ER+QLQN+ RA+++LRAKLYE+ E++++I R QVGTG
Sbjct: 238 SAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEKEISMTRKLQVGTG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + A +Q E LE +
Sbjct: 298 DRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQAERLESM 352
>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas protegens Pf-5]
gi|119361580|sp|Q4K695.1|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas protegens Pf-5]
Length = 360
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L++KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY++ + LE
Sbjct: 5 LLSKLDILQDRFEELTALLGDAEVISDQAKFRAYSKEYAEVEPIVATYKQVLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+N D ++ EM A E++ +L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDN--DPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G ++ ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRINLTLYSLDEILAGGVEAVIEPLLAEYQADQLAALGE 360
>gi|398305186|ref|ZP_10508772.1| peptide chain release factor 1 [Bacillus vallismortis DV1-F-3]
Length = 356
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 242/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLQSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM EM+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMREMVKEEISELQKETDTLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ +S GG+K ++ I G+ YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVETLIVEDQASKLQQ 353
>gi|365845576|ref|ZP_09386341.1| peptide chain release factor 1 [Flavonifractor plautii ATCC 29863]
gi|373115449|ref|ZP_09529622.1| peptide chain release factor 1 [Lachnospiraceae bacterium
7_1_58FAA]
gi|364559970|gb|EHM37930.1| peptide chain release factor 1 [Flavonifractor plautii ATCC 29863]
gi|371670392|gb|EHO35474.1| peptide chain release factor 1 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 355
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 235/352 (66%), Gaps = 5/352 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + D+ +L+ PE +P+ +L + EL+ VV YR ++ + LE+
Sbjct: 1 MMEKLRALDLHYADVEARLSAPETYEDPALVARLNKEQRELEPVVMAYRAYQRRRQDLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ AL D +M E+ E + EL LEE++KVLLLP DP D +N+++E+RAG G
Sbjct: 61 AEALM----GDPDMKELAQEEYQQAREELARLEEEIKVLLLPRDPNDDKNVIVEIRAGVG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A L RMY Y++ W+ + S +E E GG K + I+G+ +S+LK+ESG
Sbjct: 117 GEEAALFAHSLFRMYSMYADARRWRVEVDSVNETELGGVKEICFTIEGDGAWSRLKFESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PE DEV+ ++P DIE+ RS GAGGQ++NK
Sbjct: 177 VHRVQRVPETESGGRIHTSTATVAVLPEVDEVDFELNPADIEMQVFRSSGAGGQHINKTS 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L HKPTG + C +ER+Q QN+ RA+Q+LR++LYE KVREQ+E + +R SQVGTG
Sbjct: 237 SAVRLIHKPTGTVVECQQERSQFQNRDRAMQILRSRLYEEKVREQEEAVTAERRSQVGTG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R E+IRTYN+ R+TDHR+ + + L S +DG++D + + +Q E L
Sbjct: 297 MRNERIRTYNFPQGRLTDHRIGLTLYRLESVMDGDLDEIIDALVTADQAERL 348
>gi|359786973|ref|ZP_09290046.1| peptide chain release factor 1 [Halomonas sp. GFAJ-1]
gi|359295739|gb|EHK60001.1| peptide chain release factor 1 [Halomonas sp. GFAJ-1]
Length = 362
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 247/360 (68%), Gaps = 5/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+S + +++L++ L+DPEV++N ++ ++ AEL+E+V+T++++++ E +EE
Sbjct: 5 LRQRLDSFTERFEELAMLLSDPEVINNQQRFRDYSREYAELEELVATWQRYREVEVSIEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L++++ D EM E+ EI +L L+ +LK LL+P DP D R + LEVRAG G
Sbjct: 65 AEQLSRDS--DPEMRELAEMEISDGREQLGNLDVELKRLLVPKDPDDGRGVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ W+ +IS+S E+GG+K V+ +KG+ VY++LK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAEKRGWRVEVISASHGEQGGYKEVISRVKGDGVYARLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+MPE D+V ++ I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINPSDLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+G+ + C EER+Q +N+++A+ LL AKL V Q+++ R S VG+
Sbjct: 243 DSAIRITHLPSGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQEQADARRSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDG-NIDNAVQSCAAMEQKELLEELAES 410
G R+E+IRTYN+ R+TDHR+ + ++LT + G +D ++ Q E L L E+
Sbjct: 303 GDRSERIRTYNFPQGRITDHRINLTLYKLTEVVSGEQLDEVIEPLIHEYQAEQLSALQEA 362
>gi|398992801|ref|ZP_10695762.1| peptide chain release factor 1 [Pseudomonas sp. GM21]
gi|398136257|gb|EJM25349.1| peptide chain release factor 1 [Pseudomonas sp. GM21]
Length = 360
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQAKFRTYSKEYAEVEPIVGTYQQLLKVQSDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +LIELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLIELEASLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|424845384|ref|ZP_18269995.1| peptide chain release factor 1 [Jonquetella anthropi DSM 22815]
gi|363986822|gb|EHM13652.1| peptide chain release factor 1 [Jonquetella anthropi DSM 22815]
Length = 358
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 237/345 (68%), Gaps = 3/345 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L + ++++ K+ DP V SN E L + A+L VV +++++ E L E+++
Sbjct: 6 RLAEIEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQEYRQVEAGLAEAKS 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L E+ D EMAE+ E S L E+E +L LLP DP D +++++E+RAG GGDE
Sbjct: 66 L--EDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDVIVEIRAGTGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY ++ E+ W+ ++ +E E GG+K +V ++KG YSKLK+ESGVHR
Sbjct: 124 ASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGAYSKLKFESGVHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS ATVA+MP+A++VE+ I P+D+++ T RS GAGGQ+VN ++A+
Sbjct: 184 VQRVPATEASGRIHTSAATVAVMPQAEDVEIEIRPEDLDIDTYRSSGAGGQHVNMTDSAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ HKPTG+ + C +ER+Q++N+++A+ +LRA+LY+++++++Q + + R +G+G R+
Sbjct: 244 RITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSEEASTRRGMIGSGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
E+IRTYN+ NRVTDHR+ + ++L LDG+I + + +Q
Sbjct: 304 ERIRTYNFPQNRVTDHRIGLTLYKLDYMLDGDIYEMIDALTMADQ 348
>gi|417886510|ref|ZP_12530654.1| peptide chain release factor 1 [Lactobacillus oris F0423]
gi|341592901|gb|EGS35758.1| peptide chain release factor 1 [Lactobacillus oris F0423]
Length = 362
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 238/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K + +++
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++A M E+ + +LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEEMLRET-DDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY Y+E+ WK ++ +E E GGFK + + I GN VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+VNK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q QR + +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQSAYDEQRKNAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G +D +++ +Q E LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGELDEIIEALIVADQTEKLEQL 359
>gi|440739072|ref|ZP_20918594.1| peptide chain release factor 1 [Pseudomonas fluorescens BRIP34879]
gi|447915107|ref|YP_007395675.1| peptide chain release factor 1 [Pseudomonas poae RE*1-1-14]
gi|440380444|gb|ELQ17011.1| peptide chain release factor 1 [Pseudomonas fluorescens BRIP34879]
gi|445198970|gb|AGE24179.1| peptide chain release factor 1 [Pseudomonas poae RE*1-1-14]
Length = 360
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ VV+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPVVATYKNLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+N D +M EM E++ +L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDN--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPRDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQETIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|392950419|ref|ZP_10315974.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
gi|392950606|ref|ZP_10316161.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
gi|391859381|gb|EIT69909.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
gi|391859568|gb|EIT70096.1| peptide chain release factor 1 [Hydrocarboniphaga effusa AP103]
Length = 358
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 241/360 (66%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P L++KL++ + ++++ +L+ PEV+ +P ++++L+Q A+L +V ++ ++ + ++
Sbjct: 3 PSLLSKLQNMVERREEIAGELSTPEVLGDPDKFRRLSQEYAQLGPLVESFSAYRSTQDEI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E A+ D EM E+ +++ + L ELE+ L+ L+PSDPLD N+ LE+RAG
Sbjct: 63 ESLDAML----GDPEMRELAEADLPAARARLEELEKSLQAYLVPSDPLDGNNVFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA I+AGDL RMY KY+E W+ ++S SE E GG+K ++ I G YS+LK+E
Sbjct: 119 TGGDEAAIFAGDLHRMYSKYAEARGWQLEVLSLSEGEHGGYKEIISRIAGFGAYSQLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TEAQGR+HTS ATVA++PE +E + + I+P D+++ T R+ GAGGQ+VN
Sbjct: 179 SGAHRVQRVPETEAQGRIHTSAATVAVLPEIEETQAIEINPADLKVDTYRASGAGGQHVN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K E+AI + H P+G+ + C EER+Q +N+++A+ LL ++L + + QQ + R V
Sbjct: 239 KTESAIRITHIPSGVVVECQEERSQHKNRAKAMALLASRLLDAERSRQQGDVAATRKKLV 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYN+ RVTDHR+ + ++L ++G +D + Q ELL EL E
Sbjct: 299 GSGDRSERIRTYNFPQGRVTDHRINLTLYQLERVMEGELDGVIVPLLNEHQAELLAELGE 358
>gi|398842534|ref|ZP_10599713.1| peptide chain release factor 1 [Pseudomonas sp. GM102]
gi|398105631|gb|EJL95718.1| peptide chain release factor 1 [Pseudomonas sp. GM102]
Length = 360
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVGTYKQLLKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +LIE+E +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLIEIEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I T+R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIATERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|422587436|ref|ZP_16662107.1| peptide chain release factor 1 [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 360
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y + + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
Length = 362
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 237/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + +L+ ++DPEV+++ + KL++ L E V Y ++K + +++
Sbjct: 6 IFDKLQAVTDRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E ND ++A M E+ + +LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEEMLRET-NDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY Y+E+ WK ++ +E E GGFK + + I GN VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+VNK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q QR + +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQSAYDEQRKNAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G +D +++ +Q E LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGELDEIIEALIVADQTEKLEQL 359
>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. 2250]
gi|416014623|ref|ZP_11562373.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. B076]
gi|416029124|ref|ZP_11572013.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422406646|ref|ZP_16483670.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422584076|ref|ZP_16659191.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598325|ref|ZP_16672588.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|422604205|ref|ZP_16676222.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
301020]
gi|119361578|sp|Q48MV4.1|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
301020]
gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 360
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y++ + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYQQLIRVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|406672456|ref|ZP_11079681.1| peptide chain release factor 1 [Bergeyella zoohelcum CCUG 30536]
gi|405587000|gb|EKB60728.1| peptide chain release factor 1 [Bergeyella zoohelcum CCUG 30536]
Length = 361
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 239/350 (68%), Gaps = 3/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE+ + + +++ + P+V+S+ Y +L + ++L ++V Y +K+ + E
Sbjct: 5 LVPKLEAIKQRYNEVADLIIQPDVISDQKRYGQLNKEYSDLGKIVKVYEAYKNALDTITE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +G+D+++ ++ E + + LEE+LKVLL+P DP D +N+++E+RAG G
Sbjct: 65 SDEIIA-DGSDKDLVDLAKMEKLEAQDRIPSLEEELKVLLIPKDPADDKNVIVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+ D+ RMY Y + W+ + S+EA KG +K ++M+++G+ VY +K+ESG
Sbjct: 124 GDEAAIFVEDVYRMYAMYFKTKGWRHEITDSNEASKG-YKELIMKVEGDGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+GI + C + R+QL N+ A+++LRAKLY+IK++E I QR + V TG
Sbjct: 243 TKVQLTHKPSGIVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVVGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKE 402
R+ KI+TYNY RVTDHR+ K + L ++++G+I + + E E
Sbjct: 303 DRSAKIKTYNYPQGRVTDHRINKSIYNLDAYMNGDIQEMIDAVIMAENAE 352
>gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
BAA-430]
gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
BAA-430]
Length = 356
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 237/354 (66%), Gaps = 6/354 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +KL+ K + ++S L DP ++++ +L++ ++L+E+V R + + + +EE
Sbjct: 2 LASKLQPFIKRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL +D+E+ ++ EIK + ++LE ++KVLLLP DP D +NI LE+RAG G
Sbjct: 62 NKALL----DDKELGDLAKEEIKETETQNVKLEAEIKVLLLPKDPNDDKNIYLELRAGTG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAGI+ GDL R Y +Y++ WK +ISSSE GG+K ++ +KG YS+LKYE G
Sbjct: 118 GDEAGIFVGDLFRAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTS TVAIMPE D+VEVVI+P D+ + R+GG GGQ VN +
Sbjct: 178 THRVQRVPATESQGRVHTSAITVAIMPEVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +E++Q +NK +A+++L+A++YE ++ Q E+ R SQVG+G
Sbjct: 238 SAVRITHIPTGISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQMEQNAEARKSQVGSG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSF-LDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYNY NR+TDHR+ + + L L GN+D+ + A Q E L+
Sbjct: 298 DRSERIRTYNYPQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVAYFQAEALQ 351
>gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4]
gi|189039974|sp|A5G8T7.1|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
uraniireducens Rf4]
Length = 355
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 248/358 (69%), Gaps = 5/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+E + +++L LADP V+ N E++KL++ ++L +V +YR +K ++
Sbjct: 1 MFEKIEELERRYQELEALLADPAVLGNQPEFRKLSREHSDLSALVESYRNYKKVLVEITG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R L D EM EM +E+++L + LE ++K+LLLP DP D ++++LE+RAG G
Sbjct: 61 NRELLA----DPEMKEMAEAELEALEEQQAALEAEIKLLLLPKDPNDNKSVILEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E N W+ +IS+SE+EKGGFK +V ++G+ V++KLKYESG
Sbjct: 117 GDEAALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASVEGDGVFAKLKYESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TEAQGR+HTS TVAIMPEA++V++ I+P D+++ RS GAGGQ+VN +
Sbjct: 177 THRVQRVPETEAQGRIHTSACTVAIMPEAEDVDIDINPADLKIDVYRSSGAGGQHVNTTD 236
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C EER+Q++N+++A+++L+ ++ + ++EQ ++ R QVG+G
Sbjct: 237 SAVRITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQEQSARLAADRKQQVGSG 296
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + + L + + G+I S Q E L++ +E+
Sbjct: 297 DRSERIRTYNFPQGRMTDHRIGLTLYRLDAIMAGDIGEITDSLRVYYQMEALKQQSEA 354
>gi|339480543|ref|ZP_08656202.1| peptide chain release factor 1 [Leuconostoc pseudomesenteroides
KCTC 3652]
Length = 356
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 237/355 (66%), Gaps = 5/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ +LADPEV+++ Y L++ + E V Y +++ + +++
Sbjct: 4 IFQQLQTVVDRYDELNEQLADPEVMNDGQHYMALSKEAGSIRETVEVYHRYQQVIQDIQD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L +D EMA + ++ SL E ELE+KLKVL+LP DP D +NI++E+R AG
Sbjct: 64 AQDLL----DDPEMAPLAKEDLNSLKPEQEELEDKLKVLMLPQDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ +W ++I S E GG+K V + I G+ VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAERQNWSLSIIDESTTEVGGYKEVAVMITGDSVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE ++++ ++ D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPATETQGRVHTSTATVGVMPEFEDIDFELNEADLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + + +R S VGTG
Sbjct: 240 TAVRLIHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G++ + + +Q L EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGDLGEVIDALVIADQTAKLAEL 354
>gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232]
gi|24418636|sp|Q8P125.1|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes
MGAS8232]
Length = 359
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 232/355 (65%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDQKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDIILSGKMDEVIDALVMYDQTKKLESL 357
>gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
35910]
gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
35910]
Length = 361
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/350 (44%), Positives = 237/350 (67%), Gaps = 3/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KLE+ + + +++ + P+V+S+ Y L + ++L ++V Y ++K + E
Sbjct: 5 LIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVYDQYKGALDSIAE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +G+D ++ ++ E ++ LEE+LKVLL+P DP D +N+++E+RAG G
Sbjct: 65 SEEIIA-DGSDRDLVDLAKEEKLEAQAKIPGLEEELKVLLIPKDPADDKNVIVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+ D+ RMY Y + W+ + S+EA KG +K ++M+++G VY +K+ESG
Sbjct: 124 GDEAAIFVEDIYRMYTMYFKAKGWRHEVTDSNEAAKG-YKELIMKVEGEGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+G+ + C + R+QL N+ A+++LRAKLY+IK++E Q I QR + V TG
Sbjct: 243 TKVQLTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVQGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKE 402
R+ KI+TYNY RVTDHR+ K + L ++++G+I + + E E
Sbjct: 303 DRSAKIKTYNYPQGRVTDHRINKSMYNLDAYMNGDISEMIDAVIMAENAE 352
>gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
Length = 358
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 237/357 (66%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +E + + DL K+ DP+V+++ S+ K+ + L +V Y + KD E + E
Sbjct: 1 MFENIEHIKENYLDLEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E +D++M EM+ EIK L + +E++K+LL+P DP D+R++++E+R GAG
Sbjct: 61 NKELIGE-ADDQDMVEMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AGDL RMY Y+++ +K + S GG K I+G YS+ KYESG
Sbjct: 120 GDEAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PE DEV+V +DP DI RS G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVLPEVDEVDVELDPNDIRTDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +E++Q++NK +A+++L A++YE++ ++ ++I R SQVGTG
Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKEIADNRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ R+TDHR+ K ++L FL+GNI + S A +Q LE++ E
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIAEDQTRKLEKIGE 356
>gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
20284]
gi|418069590|ref|ZP_12706867.1| peptide chain release factor 1 [Pediococcus acidilactici MA18/5M]
gi|427439443|ref|ZP_18924098.1| peptide chain release factor 1 [Pediococcus lolii NGRI 0510Q]
gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
20284]
gi|357536121|gb|EHJ20152.1| peptide chain release factor 1 [Pediococcus acidilactici MA18/5M]
gi|425788279|dbj|GAC44886.1| peptide chain release factor 1 [Pediococcus lolii NGRI 0510Q]
Length = 359
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ K+++ A + +LS LADPEV+++ YQ+L++ E+ E V YR+++ + E
Sbjct: 3 IMDKVQAVADRYDELSELLADPEVLADSQRYQELSKEEGEIRETVEKYREYRKVVDSIAE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E D EM ++ +E+ L ++ +LEE++KVL+LP DP D +NI++E+ AG
Sbjct: 63 NEELQREKL-DPEMDSLVKAELADLRDQKEKLEEEIKVLMLPKDPNDDKNIIMEIHGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E WK ++ + + GGFK +V+ I G++VYSKLKYE+G
Sbjct: 122 GDEASLFAADLYNMYTRYAESQGWKVQIVDENATDVGGFKEIVLMISGDKVYSKLKYENG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V++ IDPKDI RS GAGGQ++NK
Sbjct: 182 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDIEIDPKDIRTDVYRSSGAGGQHINKTS 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+ +A+++L+A++Y+ ++++ +R + VGTG
Sbjct: 242 SAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYYQSQEEDAYNEERKNAVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + +L ++G ++ +++ +Q + +E L
Sbjct: 302 DRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELNEIIEALILDDQAKKMEAL 356
>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
arsenicoxydans]
Length = 361
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 243/365 (66%), Gaps = 6/365 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M +P ++ KL+ + +L+V L + SN Y+K+ + AEL +V+ Y + +
Sbjct: 1 MMKPSMLAKLDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQAD 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+++++ + +D +M E E+ + + +LE L+ +LLP DP D RNI LE+
Sbjct: 61 NDIKDAQGML----SDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEI 116
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDE+ ++AGDL+RMY +++E+N W+ ++S S +E GG+K V++ I GN YSKL
Sbjct: 117 RAGTGGDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKL 176
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQ 287
K+ESG HRVQRVP TE QGR+HTS TVA+MPEADEVE V I+P D+ + T R+ GAGGQ
Sbjct: 177 KFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQ 236
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
++NK ++A+ + H PTGI + C ++R+Q +NK+ AL++L A++ ++++REQQ + R
Sbjct: 237 HINKTDSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRK 296
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
S +G+G R+E+IRTYN+ R+TDHR+ + ++L +DG++ + AA Q +LL
Sbjct: 297 SLIGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQADLLAA 356
Query: 407 LAESV 411
L ++V
Sbjct: 357 LGDAV 361
>gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella morbillorum M424]
gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella morbillorum M424]
Length = 362
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 242/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE + ++ L+ L+DP+VVS+ + + ++ +++ V+ +R++K+ +Q+ +
Sbjct: 3 ILGQLEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKNIVQQIAD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E D+EM EM+ EIK L L +EE+LK+LLLP DP D +N+++EVR AG
Sbjct: 63 TKELL-EIEEDKEMKEMMQEEIKELEPSLAPMEEELKILLLPKDPNDGKNVVVEVRGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMY +++E WK ++ SE GG K + I G VYSK+K+ESG
Sbjct: 122 GDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATV ++PEA+E+E+ I+ DI + T S GAGGQ+VN
Sbjct: 182 AHRVQRVPTTESSGRIHTSTATVVVLPEAEEIEIDINENDIRVDTFASSGAGGQSVNTTM 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + +ER+Q++NK +A+++LRA++Y+ +E+Q K +R S+VGTG
Sbjct: 242 SAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKYQQEEQAKFDAERKSKVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + + L ++G +D +++ EQ E + EL
Sbjct: 302 DRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQAEKMAEL 356
>gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
Length = 358
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 236/349 (67%), Gaps = 3/349 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE+ A+ +++L+ L DP + S+ + + ++ A L+ Y+++K +EE
Sbjct: 4 MIEKLETIARRYEELNEILMDPSIASDIHKMTEASKEQASLETAYQLYQEYKKVLSGIEE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L KEN D E+ EM E+ L + LEEKL + L+P DP D +N+++EVR AG
Sbjct: 64 AKELMKEN--DPEIKEMAELELSELEEKKPHLEEKLHLELIPKDPNDNKNVIVEVRGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE I+AGDL RMY KY+E WK ++ + E+E GGF V +KG VYSKLK+ESG
Sbjct: 122 GDEGNIFAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMVKGEGVYSKLKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE QGRVHTSTATV +MPEA+EV+V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 182 SHRVQRVPKTETQGRVHTSTATVLVMPEAEEVDVEINPGDLRIDTYRASGAGGQHINKTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + R+Q NK +A++ LRA++YE+ REQ+E + ++R S++G+G
Sbjct: 242 SAVRITHLPTGIVASSQDGRSQHDNKDKAMRALRARVYEMVQREQEEALGSERRSKIGSG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQK 401
R+EKIRTYNY NRVTDHR+ + +L ++G +D+ + + +Q+
Sbjct: 302 DRSEKIRTYNYPQNRVTDHRIGLTIQQLDRIMEGKLDDVIDALINEDQR 350
>gi|335028987|ref|ZP_08522500.1| peptide chain release factor 1 [Streptococcus infantis SK1076]
gi|334269688|gb|EGL88102.1| peptide chain release factor 1 [Streptococcus infantis SK1076]
Length = 359
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 239/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+TYR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTTYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
Length = 355
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 237/354 (66%), Gaps = 6/354 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+LE A ++ LA+PE+ + Y+K+++ AELD VV+ + F E ++
Sbjct: 4 RLEQLAHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIK---- 59
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
A+E D +M M E+ +L +LE L+VLLLP DP D+R++ LE+RAG GGDE
Sbjct: 60 TAQEMMADPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDE 119
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
+ ++AGDL+RMY +Y+E NSW+ L+S+S++E GG+K V+ + G+ VY +LK+ESG HR
Sbjct: 120 SALFAGDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHR 179
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP TE QGR+HTS TVA++PEADE ++VI+P D+ + T R+ GAGGQ++NK ++A
Sbjct: 180 VQRVPATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSA 239
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+ + H PTG+ + C ++R+Q +NK +ALQ+L A+L + + +EQ +K QR S VGTG R
Sbjct: 240 VRVTHLPTGLVVECQDDRSQHRNKDKALQVLAARLKDKQQQEQHDKEAAQRKSLVGTGDR 299
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+E+IRTYNY RVTDHR+ + ++L +DG+++ + A Q E L L
Sbjct: 300 SERIRTYNYPQGRVTDHRINLTLYKLGHIMDGDLNELTNALLAEHQAEQLAALG 353
>gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
gi|156864503|gb|EDO57934.1| peptide chain release factor 1 [Clostridium sp. L2-50]
Length = 358
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 246/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE L+ +L DP++VS+ ++++KL + +EL +V Y+++KD ++ +E+
Sbjct: 1 MFDKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E + EE+ EM E+ + + E +LK+LLLP DP D++N+++E+RAGAG
Sbjct: 61 SLLMLEEEND-EELREMAKEELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMYQKY +Q WK L+S +E GGFK V I G+ YSK+KYESG
Sbjct: 120 GDEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P+TE+ GR+HTST TVA+MPEA+EV+V I+ DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRIPKTESGGRIHTSTVTVAVMPEAEEVDVEINENDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK++A LLR+KLY++++++Q + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRKSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ + RVTDHR+K+ ++L L+G+++ + S A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIAADQAAKLSQVNE 356
>gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
gi|254790871|sp|B8G7K1.1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
Length = 361
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 237/355 (66%), Gaps = 6/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE+ A+ + +L+ +A PEV +N + Q+ A+ EL+++V+TYR+++ ++ + E
Sbjct: 1 MFDKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQAAQRAIAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ EN D E+ + E+ + L LEE+LKVLLLP DP D++++++E+R G G
Sbjct: 61 AEAMLDEN--DPELRALAQEELDTQRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +++E WK + S +E GG K V+ +I G YS+LKYE G
Sbjct: 119 GDEAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA+GR+HTSTATVA++PE +E E+ I P+D+ + RS G GGQ VN +
Sbjct: 179 VHRVQRVPATEARGRIHTSTATVAVLPEVEETEIEIKPEDLRIDVFRSAGHGGQGVNTTD 238
Query: 294 TAIDLFHKPTG---IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
+A+ + +KP I + C + R+Q+QN+ RA+ +LRA+LY + ++Q +I RL+QV
Sbjct: 239 SAVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQREIGASRLAQV 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
G+G RAEKIRTYN+ +R+TDHR+ NF L + LDG +D +++ + E L
Sbjct: 299 GSGERAEKIRTYNFPQDRITDHRIGQNFSNLPAVLDGELDKIIEALIVYDTAERL 353
>gi|334139377|ref|ZP_08512769.1| peptide chain release factor 1 [Paenibacillus sp. HGF7]
gi|333602190|gb|EGL13621.1| peptide chain release factor 1 [Paenibacillus sp. HGF7]
Length = 356
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ A ++ LS L DP+V S+ + ++ ++ ++L E Y ++KD +QL+
Sbjct: 1 MLDRLQALADRYEKLSELLCDPDVTSDTKKLREFSKEQSDLQEAYDAYVEYKDVLEQLDA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E D+EM +++ EI+ LS ELEE+L VL+LP DP D +N+++E+R AG
Sbjct: 61 AKAMQAEK-LDDEMRDLVKMEIEELSGRKDELEERLTVLMLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY K+++ WK ++ ++ + GGFK ++ I G YSK+KYESG
Sbjct: 120 GDEAALFAGDLYRMYSKFADAQGWKTEVLEANLNDLGGFKEIIFMINGKGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTST+TV +MPE +E+++ I DI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPVTESGGRIHTSTSTVGVMPEMEEIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C + ++Q NK++ALQ+LRA++Y++K +E++ K +R S+VGTG
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNDNKAKALQVLRARIYDVKRQEEEAKYAGERKSKVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ +RVTDHR+ + +L + L+G++D V + Q ELLE
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDTILNGDMDEIVNALTMTAQAELLE 352
>gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
Length = 362
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 238/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + K ++ L E V Y ++K + + +
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQTISD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L +E ND+++ + E+ E +LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEELLRET-NDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ WK ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+VNK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q +R +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQQEQSAYDQKRKDAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G++D +++ +Q + LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQTQKLEQL 359
>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
gi|166223590|sp|A5VYG5.1|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
putida F1]
Length = 360
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE +++L+ L D EV+S+ + ++ ++ AE++ V + Y++++ + LE
Sbjct: 5 LLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGRVHTS TVA++PE DE + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAALGD 360
>gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
gi|225207415|gb|EEG89769.1| peptide chain release factor 1 [Coprococcus comes ATCC 27758]
Length = 358
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 247/359 (68%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ +L +P+VV++ S ++KL + +L +V Y+++K+C++ +E+
Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVVNDQSRFRKLMKEQNDLTPIVEAYKEYKNCKQNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S +L +E + EEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLSLLEEESD-EEMKELAKEELSESKKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y++ WK +IS +E GGFK VV I G YS++KYESG
Sbjct: 120 GDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMITGQGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +Q R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQHSAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ RVTDHR+K+ +L S ++G++D + S A +Q L + E+V
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSIMNGDLDEVIDSLIAADQAAKLASMNEAV 358
>gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Pseudogulbenkiania ferrooxidans
2002]
gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Pseudogulbenkiania ferrooxidans
2002]
Length = 358
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 238/361 (65%), Gaps = 6/361 (1%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P + TKL A ++++ LA + ++KL + AEL VV TY+ ++ CE
Sbjct: 2 KPSIATKLSQLADRLEEVTHLLASEAATRDMDAFRKLTREHAELTPVVETYQAYRQCESD 61
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
L A A E D +M E +EI + L+ +L+ LLLP DP D +NI LE+RA
Sbjct: 62 L----ATATEMLADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRA 117
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA ++AGDL+RMY +++E+N W+ ++SSSE++ GG+K V++ + G +S+LK+
Sbjct: 118 GTGGDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKF 177
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNV 289
ESG HRVQRVP TE QGR+HTS TVA+MPEA+E+ EVV++P D+ + T R+ GAGGQ++
Sbjct: 178 ESGGHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHI 237
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NK ++A+ + H PTGI C + R+Q NK+ A+Q+L A++Y+I++R QQ+ + +R S
Sbjct: 238 NKTDSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQQQSVAAERKSL 297
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+G+G R+E+IRTYNY R+TDHR+ + ++L +DG++ + A Q ELL +
Sbjct: 298 IGSGDRSERIRTYNYPQGRITDHRINLTLYKLDQVMDGDLFELTDALIAEHQAELLAAMG 357
Query: 409 E 409
+
Sbjct: 358 D 358
>gi|336450052|ref|ZP_08620509.1| peptide chain release factor 1 [Idiomarina sp. A28L]
gi|336283209|gb|EGN76416.1| peptide chain release factor 1 [Idiomarina sp. A28L]
Length = 364
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 247/364 (67%), Gaps = 4/364 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + L++KLES + ++L V L D ++++N +++ L++ ++L++ V +R+++
Sbjct: 1 MLKASLVSKLESLLERHEELEVLLGDADIITNQDKFRALSREYSQLEDAVKCFRQYQQSL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + E+ D EM EM E+++ + L+EL +L+VLLLP DP D R LE+
Sbjct: 61 EDLATAKEMVSES--DAEMREMAFEEVQAAESSLVELASELQVLLLPKDPNDDRPCYLEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA I+AGDL RMY +Y+E+NSW+ +IS++E E GGFK +++ + G+ Y K+
Sbjct: 119 RAGAGGDEAAIFAGDLFRMYSRYAERNSWRMNIISANEGEHGGFKEIIVHMMGDGAYGKM 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQ 287
K+ESG HRVQRVP+TE+QGR+HTS TVA++PE E E + I+P D+ + T R+ GAGGQ
Sbjct: 179 KFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAIDINPADLRIDTYRASGAGGQ 238
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
+VN+ ++A+ L H PTG+ + C EER+Q +NK++A+ +L+++L + ++ ++ R
Sbjct: 239 HVNRTDSAVRLTHLPTGVVVECQEERSQHKNKAKAMSVLQSRLQAAEDARREAAEQSTRR 298
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
S VG+G R+E+IRTYNY RVTDHR+ + L L+G++D + + +LL
Sbjct: 299 SLVGSGDRSERIRTYNYPQGRVTDHRINLTLHRLNEVLEGSLDLLLDAIIQEHNADLLAS 358
Query: 407 LAES 410
L+E+
Sbjct: 359 LSET 362
>gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
DSM 15981]
gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
DSM 15981]
Length = 358
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/359 (45%), Positives = 241/359 (67%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L + L DP+V + + KL + A+L +V Y+++K ++ +E+
Sbjct: 1 MFDKLDDILIHYEELMLMLGDPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ +E + EEM EM E+ + +LE +LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLAMLEEESD-EEMREMAKEELADAKKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y++ WK +IS +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFAAELYRMYTNYADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+EV+V ID D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KL++I++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDIELEKRQSSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + + A +Q L +L E V
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLSKLNEQV 358
>gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992234|gb|EEC58238.1| peptide chain release factor 1 [[Bacteroides] pectinophilus ATCC
43243]
Length = 363
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 240/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++D++++L++P+VV++ ++ L + ++ +V+ Y ++K C++ +E+
Sbjct: 7 IFGRLEDLVHRYEDITLELSNPDVVNDQKRFRDLMKEQNDITPIVNAYNEYKSCKQNIED 66
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + E NDEE+ E+ E+ ELE +LK+LLLP DP D ++I++E+RAGAG
Sbjct: 67 SLTMLDEE-NDEELKELAKEELNDSKKRAEELENELKILLLPKDPNDDKDIIVEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y+E WK +++S E GG K + +KG YS LKYESG
Sbjct: 126 GDEAALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMVKGQGAYSVLKYESG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+EV+V ID KDI + R+ G GGQ VN +
Sbjct: 186 VHRVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDEKDIRIDVMRASGNGGQCVNTTD 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++Q+QNK +A LLRAKLY+++ ++ + R SQ+GTG
Sbjct: 246 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQKAHDAEADARRSQIGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+ + ++L +DG+I + +C A +Q L ++ E+
Sbjct: 306 DRSEKIRTYNFPQGRVTDHRIGLTLYKLDKIMDGDIQEIIDACIAADQAAKLAKMGEN 363
>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
gi|32171521|sp|Q88PW5.1|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
Length = 360
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE +++L+ L D EV+S+ + ++ ++ AE++ V + Y++++ + LE
Sbjct: 5 LLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGRVHTS TVA++PE DE + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q + ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNALASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQADQLAALGD 360
>gi|398860967|ref|ZP_10616608.1| peptide chain release factor 1 [Pseudomonas sp. GM79]
gi|398233986|gb|EJN19882.1| peptide chain release factor 1 [Pseudomonas sp. GM79]
Length = 360
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVGTYKQLLKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +LIE+E +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLIEIEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|365875879|ref|ZP_09415404.1| bacterial peptide chain release factor 1 (brf-1) [Elizabethkingia
anophelis Ag1]
gi|442587524|ref|ZP_21006340.1| Protein chain release factor A [Elizabethkingia anophelis R26]
gi|365756391|gb|EHM98305.1| bacterial peptide chain release factor 1 (brf-1) [Elizabethkingia
anophelis Ag1]
gi|442562695|gb|ELR79914.1| Protein chain release factor A [Elizabethkingia anophelis R26]
Length = 361
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/350 (44%), Positives = 239/350 (68%), Gaps = 3/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KLE+ + + +++ + P+V+S+ Y L + ++L ++V Y ++K ++E
Sbjct: 5 LIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVKVYDQYKSALDTIKE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +G+D++++++ E ++ LEE+LKVLL+P DP D +NI++E+RAG G
Sbjct: 65 SDEIIA-DGSDKDLSDLAKMEKLEAQEKIPGLEEELKVLLIPKDPADDKNIIVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+ D+ RMY Y + W+ + S+EA KG +K ++M+++G VY +K+ESG
Sbjct: 124 GDEAAIFVEDIYRMYSMYFKTKGWRHEVTDSNEATKG-YKELIMKVEGEGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS T+A++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITIAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKP+GI + C + R+QL N+ A+++LRAKLY+IK++E I QR + V TG
Sbjct: 243 TKVQLTHKPSGIVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVVGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKE 402
R+ KI+TYNY RVTDHR+ K + L ++++G+I + + E E
Sbjct: 303 DRSAKIKTYNYPQGRVTDHRINKSIYNLDAYMNGDIGEMIDAVIMAENAE 352
>gi|404328819|ref|ZP_10969267.1| peptide chain release factor 1 [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 357
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 235/354 (66%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L++ + L+ LADPEV+ +P + + ++ +EL+ V YR +K ++L +
Sbjct: 1 MFEHLQATEDRYDKLNELLADPEVIGDPVKLRDYSKEQSELEPTVMVYRAYKKNAQELAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + E +D+ M +MI EI L + +LE++LK L++P DP D RN++LE+R+ AG
Sbjct: 61 AREMIDET-SDDAMRQMIQDEIGRLEAQKPKLEKRLKQLIVPRDPNDERNVILEIRSAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA +WAGDL+ MY +Y+EQ+ WK +I +S E GG+K VV I G YS+LKYESG
Sbjct: 120 GNEAALWAGDLLNMYTRYAEQHGWKLEVIDASPNEIGGYKEVVCMITGRGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA EVEV ++ KDI + S G GGQ VN
Sbjct: 180 THRVQRVPETESGGRIHTSTATVAVLPEAKEVEVELNDKDIRVDRFASSGPGGQGVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI L H PTGI + C +ER+Q++NK +A+++LRA++Y+ E +E + R S VGTG
Sbjct: 240 SAIRLTHLPTGIVVSCQDERSQIKNKEKAMKVLRARVYDKYRSEAREHYDSTRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYNY NRVTDHR+ + +L L G +D + + +Q + +E+
Sbjct: 300 NRSERIRTYNYSQNRVTDHRIGLTVHQLDQVLGGKLDEFIDALILNDQAKKIEQ 353
>gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
gi|229576658|sp|B4U955.1|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
Length = 356
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 245/356 (68%), Gaps = 8/356 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K++ + + KLA ++ + Y+ L++ + EL + Y+ + K +E+
Sbjct: 6 FLEKIQDIEQKYAQTEEKLASLDITKDADTYKALSKDLKELSYIHELYKDYNKILKDIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L K D+++ E+ E+++L+ +L++ E++L +L P D D++N++LE+RAGAG
Sbjct: 66 TKELLK----DKDLRELAEKELENLNTKLLQKEKELINVLTPKDANDSKNVILEIRAGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL+RMYQ+Y+E+ WK ++ +++ GG+K V++ I+G VYS LKYESG
Sbjct: 122 GEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHLKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PEADE +VVI+P+D+ + T R+ GAGGQ VN E
Sbjct: 182 VHRVQRVPITESGGRIHTSTITVAVLPEADETDVVINPQDLRIETFRASGAGGQYVNTTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I C +ER+QLQNK +A+++L A+L + ++++E+ +R QVGTG
Sbjct: 242 SAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETDKERKEQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+EKIRTYN+ NRVTDHR+ + +L LDG++D+ + S A KEL E+LA
Sbjct: 302 ERSEKIRTYNFSQNRVTDHRINLTLHKLQDVLDGDLDDIISSLQA---KELEEKLA 354
>gi|398876015|ref|ZP_10631175.1| peptide chain release factor 1 [Pseudomonas sp. GM67]
gi|398882394|ref|ZP_10637362.1| peptide chain release factor 1 [Pseudomonas sp. GM60]
gi|398198936|gb|EJM85886.1| peptide chain release factor 1 [Pseudomonas sp. GM60]
gi|398205307|gb|EJM92091.1| peptide chain release factor 1 [Pseudomonas sp. GM67]
Length = 360
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V Y++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVDAYKQLLKVQSDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K+N D +M EM E++ +LIE+E L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDN--DPDMREMAVEEVREAKEQLIEIEASLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + +
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGD 360
>gi|398904470|ref|ZP_10652313.1| peptide chain release factor 1 [Pseudomonas sp. GM50]
gi|398175849|gb|EJM63589.1| peptide chain release factor 1 [Pseudomonas sp. GM50]
Length = 360
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVGTYKQLLKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +LIE+E +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLIEIEARLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|335357008|ref|ZP_08548878.1| peptide chain release factor 1 [Lactobacillus animalis KCTC 3501]
Length = 361
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+ +++L L+DP+V+++ + +L++ MA+L E V Y K+K +Q+++
Sbjct: 4 LFDRLQMLEDRYEELGELLSDPDVIADTKRFMELSKEMADLRETVEKYNKYKQVIQQIKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +D+EM M+ E+ S E +LEE++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLSAGLDDDEMTTMVKEELASSKTEKEQLEEEIKILLLPKDPNDDKNIIMEIRGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MY KY+E W +I + E GGFK + + I G VYSKLKYESG
Sbjct: 124 GDEASLFAGDLFTMYSKYAEHQGWNIEVIDKTMTEVGGFKEIALLINGRSVYSKLKYESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATV +MPE ++VE+ IDPKDI + R+ GAGGQ++NK
Sbjct: 184 AHRVQRIPVTESQGRVHTSTATVVVMPEEEDVEIEIDPKDIRVDVYRASGAGGQHINKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++LRA++Y+ ++Q R S VGTG
Sbjct: 244 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILRARVYDYYAAQEQSAYDENRKSAVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + +Q + LEEL
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLYDQTKALEEL 358
>gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 359
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 239/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G+ VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGHSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
B728a]
gi|422675092|ref|ZP_16734440.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
str. M302273]
gi|440744588|ref|ZP_20923891.1| peptide chain release factor 1 [Pseudomonas syringae BRIP39023]
gi|75503325|sp|Q4ZXW7.1|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|63254909|gb|AAY36005.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
syringae pv. syringae B728a]
gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
str. M302273]
gi|440374006|gb|ELQ10749.1| peptide chain release factor 1 [Pseudomonas syringae BRIP39023]
Length = 360
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y + + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|422619385|ref|ZP_16688075.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
str. M301072]
gi|422631822|ref|ZP_16697002.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
1704B]
gi|443645394|ref|ZP_21129244.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
B64]
gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
1704B]
gi|443285411|gb|ELS44416.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
B64]
Length = 360
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y + + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
BAA-613]
gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
BAA-613]
Length = 358
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 241/359 (67%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L + L DP+V + + +L + A+L +V Y+++K ++ +E+
Sbjct: 1 MFDKLDDMLIHYEELMLMLGDPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E + EEM EM E+ + +LE +LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLALLEEESD-EEMREMAKEELSDARKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y++ WK ++S +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFAAELYRMYSNYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+EV+V ID D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY+I++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + + A +Q L + E+V
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLARMNEAV 358
>gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5]
gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5]
Length = 357
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 244/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++++ +L +P+V ++P ++KL + ++L+ +V YR++K ++ +E+
Sbjct: 1 MFDRLEDLLIRYEEVMGELQEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ +E + EEM EM E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLAMLEEESD-EEMREMAKEELNDSKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y+E WK +IS +E GGFK V I G YS+LKYESG
Sbjct: 120 GDEAALFAAEIYRMYVHYAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+EV+VVI+ KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAIMPEAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KL+++++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDLELEKQQASEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+K+ +L + L+G++D + S A +Q L + E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQAAKLANMNED 357
>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
gi|421894487|ref|ZP_16324975.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
pentosaceus ATCC 25745]
gi|385272577|emb|CCG90347.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
Length = 359
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I K+++ A +++LS LADPEV+ + YQ+L++ E+ E V YR+++ + E
Sbjct: 3 IIEKVQAVADRYEELSELLADPEVLGDSQRYQELSKEEGEIRETVEKYREYRKTVDAIAE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E D EM ++ +E+ L LEE++K+L+LP+DP D +NI++E+ AG
Sbjct: 63 NEELQREKL-DPEMDSLVKAELAELRETKATLEEEIKILMLPTDPNDDKNIIMEIHGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E WK ++ + + GGFK +V+ I GN+VYSKLKYE+G
Sbjct: 122 GDEASLFAADLYNMYTRYAETQGWKVEVVDENATDVGGFKEIVLMISGNKVYSKLKYENG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTST+TV +MPEA++V++ ID KDI RS GAGGQ++NK
Sbjct: 182 AHRVQRVPVTESAGRVHTSTSTVGVMPEAEDVDIEIDQKDIRTDVYRSSGAGGQHINKTS 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+ +A+++L+A++Y+ ++++ +R S VGTG
Sbjct: 242 SAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYYQTQEEDAYNAERKSAVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + +L ++G +D+ + + +Q + +E+L
Sbjct: 302 DRSERIRTYNFPQNRVTDHRIGLTLNKLDRVMNGELDDIIDALILDDQAKKVEQL 356
>gi|387825191|ref|YP_005824662.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
Length = 361
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 251/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++LLLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANETIEKLESELQILLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|363899902|ref|ZP_09326408.1| peptide chain release factor 1 [Oribacterium sp. ACB1]
gi|395210304|ref|ZP_10399224.1| peptide chain release factor 1 [Oribacterium sp. ACB8]
gi|361956756|gb|EHL10068.1| peptide chain release factor 1 [Oribacterium sp. ACB1]
gi|394704594|gb|EJF12132.1| peptide chain release factor 1 [Oribacterium sp. ACB8]
Length = 358
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 239/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE K ++++ L PEVVS+ ++Y+KL + L+ V Y F+ E+ E+
Sbjct: 1 MFENLEEVKKHYEEIMENLTIPEVVSDINQYKKLILEQSNLEPVYKAYIAFRKAEES-EK 59
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
L +N D+++ EM E+ + + L +++++LLLP D D +NI++E+R GAG
Sbjct: 60 DALLILDNEKDKDLIEMAKEELSTAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+E+ WK L+S +E GG K VV + G YS+LKYESG
Sbjct: 120 GEEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVNGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPE ++VEV I+P D+++ RS GAGGQ++NK
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEVEDVEVEINPADVKMEVFRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ C EER+Q+QN+ +A++LLRA+LYEI++ +QQ++ ++ SQ+GTG
Sbjct: 240 SAVRLIHVPTGMVAECQEERSQVQNREKAMRLLRARLYEIELEKQQKENAEEKRSQLGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+K+ + + + L G++D + +Q E L L E+
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYNMDAVLGGDLDLVIDPLITEDQAEKLARLEEN 357
>gi|358061930|ref|ZP_09148580.1| peptide chain release factor 1 [Clostridium hathewayi WAL-18680]
gi|356699770|gb|EHI61280.1| peptide chain release factor 1 [Clostridium hathewayi WAL-18680]
Length = 357
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/357 (45%), Positives = 245/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L +L +P V + + ++KL + A+L +V TY ++K ++ +E+
Sbjct: 1 MFDRLDDILIHYEELMQELNNPSVAEDQNRFRKLMKEQADLTPLVETYTEYKKAKQVVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E + EEM EM+ E+ + ELE++LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLALLEEESD-EEMREMLKEELSDARKRIEELEQELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y++ + WK L+S +E GGFK VV I G YSKLKYESG
Sbjct: 120 GDEAALFASELYRMYCNYADSHRWKVELVSVNENGIGGFKEVVAMITGQGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA++V+VVI+ KD + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEDVDVVIEDKDCRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQNSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+ + ++L ++G+I + +C A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQAAKLAKMNE 356
>gi|422654390|ref|ZP_16717133.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 360
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y + + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|395500681|ref|ZP_10432260.1| peptide chain release factor 1 [Pseudomonas sp. PAMC 25886]
Length = 360
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+ Y + + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRTYSKEYAEVEPIVAAYTQLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ ++LIELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKDKLIELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 VHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|422665159|ref|ZP_16725031.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|424066162|ref|ZP_17803634.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|424070808|ref|ZP_17808240.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|440720020|ref|ZP_20900441.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34876]
gi|440726145|ref|ZP_20906402.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34881]
gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|407999891|gb|EKG40261.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|408002594|gb|EKG42837.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440366742|gb|ELQ03819.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34876]
gi|440367292|gb|ELQ04358.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34881]
Length = 360
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y + + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
Length = 361
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 251/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++LLLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N]
gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N]
Length = 356
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 238/360 (66%), Gaps = 6/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE A ++ LADP+ + +++L++ AEL+ VV + F+ + L
Sbjct: 1 MLGRLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADL-- 58
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A A+E D EM M EIK+ + LE +L+VLLLP DP D R++ LE+RAG G
Sbjct: 59 --ATAQEMLADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ +++GDL+RMY +Y+E W+ ++S S +E GG+K V+ I G+ Y +LK+ESG
Sbjct: 117 GDESALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TEAQGR+HTS TVA+MPEADE+ ++VI+P D+ + T R+ GAGGQ++NK
Sbjct: 177 AHRVQRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKT 236
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C ++R+Q +NK RA+Q+L A+L + ++RE+Q K +R S VG+
Sbjct: 237 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGS 296
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
G R+E+IRTYNY RVTDHR+ + ++L L+G+++ + A Q E L L E +
Sbjct: 297 GDRSERIRTYNYPQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQAEQLAALGEDI 356
>gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 364
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 254/362 (70%), Gaps = 1/362 (0%)
Query: 46 LICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFK 105
++ E ++ KL+ + ++ L+ +++DP V+++ +++Q L + A ++ ++ Y+ ++
Sbjct: 1 MLTEKENKMLEKLDFLEEKYQKLNQEISDPAVIADQAKWQDLMKEHAHMEPIIQKYKAYR 60
Query: 106 DCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIM 165
+ ++ + +S+ + + D E M E+ + +L LEE+LK+LLLP DP D RN++
Sbjct: 61 EADQAIADSKEMLADKSIDPEFKAMCEDELAEQTAQLATLEEELKILLLPKDPNDERNVI 120
Query: 166 LEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVY 225
+E+RAGAGGDEA ++AGDL RMY +Y+E+ SWK ++SS+ + GG K + I+G Y
Sbjct: 121 VEIRAGAGGDEAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAIQGQGAY 180
Query: 226 SKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAG 285
S+LKYESGVHRVQRVP+TE+ GR+HTSTATVA++PEAD+VEV ++P DI + RS G G
Sbjct: 181 SRLKYESGVHRVQRVPETESGGRIHTSTATVAVLPEADDVEVDLNPNDIRVDVYRSSGNG 240
Query: 286 GQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ 345
GQ VN ++A+ L H P+G+ + C +E++Q++NK++A+++L+A+LY++++++QQ I +
Sbjct: 241 GQCVNTTDSAVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQQSAISEE 300
Query: 346 RLSQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R SQVGTG R+E+IRTYN+ R+TDHR+ +L +FLDG ID + + +Q + L
Sbjct: 301 RKSQVGTGDRSERIRTYNFPQGRITDHRIGQTVHQLEAFLDGEIDEMINALITTDQAKKL 360
Query: 405 EE 406
E+
Sbjct: 361 EQ 362
>gi|398308672|ref|ZP_10512146.1| peptide chain release factor 1 [Bacillus mojavensis RO-H-1]
Length = 356
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 242/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM +M+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAML-EDKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ +S GG+K ++ I G+ YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQ 353
>gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
Length = 359
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDVDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
Length = 358
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 4 VLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M EM+ E+ L + EL E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDADMREMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEISIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438107|ref|ZP_08617748.1| peptide chain release factor 1 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848773|gb|EDK25691.1| peptide chain release factor 1 [Ruminococcus torques ATCC 27756]
gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336015151|gb|EGN44975.1| peptide chain release factor 1 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 356
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 237/348 (68%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++++ +L +P V +P ++KL + ++L +V Y ++K C + +E+
Sbjct: 1 MFDRLEDLLIRYEEVMGELQEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ +E + EEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLAMLEEESD-EEMRELAKEELSDSRKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y++ WK +IS +E GGFK V I G YS+LKYESG
Sbjct: 120 GDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAIMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQASEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+K+ +L + L+G++D + S A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347
>gi|339485721|ref|YP_004700249.1| peptide chain release factor 1 [Pseudomonas putida S16]
gi|431800788|ref|YP_007227691.1| peptide chain release factor 1 [Pseudomonas putida HB3267]
gi|338836564|gb|AEJ11369.1| peptide chain release factor 1 [Pseudomonas putida S16]
gi|430791553|gb|AGA71748.1| peptide chain release factor 1 [Pseudomonas putida HB3267]
Length = 360
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE +++L+ L D EV+S+ + ++ ++ AE++ V + Y++++ + LE
Sbjct: 5 LLNKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGESVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I T+R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIATERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G ++ ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAGGVEAVIEPLLAEYQADQLAALGD 360
>gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
Length = 362
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K+ + +++
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ EM E+ +L+++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DTEMLREE-SDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ W ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPEA++V+V +DPKDI + RS GAGGQ++NK
Sbjct: 185 AHRVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+Q+L+A++Y+ +++Q + QR + +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G+++ ++S +Q + LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQAQKLEQL 359
>gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
gi|238692951|sp|B2GAT1.1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
Length = 360
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K+ + +++
Sbjct: 4 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ EM E+ +L+++L+VLL+P DP D +NI++E+R AG
Sbjct: 64 DTEMLREE-SDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ W ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 123 GDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPEA++V+V +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+Q+L+A++Y+ +++Q + QR + +GTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G+++ ++S +Q + LE+L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQAQKLEQL 357
>gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
14931]
gi|385812049|ref|YP_005848440.1| peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT
5716]
gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
14931]
gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT
5716]
Length = 362
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K+ + +++
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ EM E+ +L+++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DTEMLREE-SDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ W ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GRVHTSTATV +MPEA++V+V +DPKDI + RS GAGGQ++NK
Sbjct: 185 AHRVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+Q+L+A++Y+ +++Q + QR + +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G+++ ++S +Q + LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQAQKLEQL 359
>gi|422659504|ref|ZP_16721929.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M302278]
gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
str. M302278]
Length = 360
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y++ + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|32171519|sp|Q888C1.1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 360
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y++ + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAASAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|399002460|ref|ZP_10705146.1| peptide chain release factor 1 [Pseudomonas sp. GM18]
gi|398124900|gb|EJM14396.1| peptide chain release factor 1 [Pseudomonas sp. GM18]
Length = 360
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVDTYKQLLKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ LIELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKERLIELEASLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|408357422|ref|YP_006845953.1| peptide chain release factor 1 [Amphibacillus xylanus NBRC 15112]
gi|407728193|dbj|BAM48191.1| peptide chain release factor 1 [Amphibacillus xylanus NBRC 15112]
Length = 356
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 241/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + ++ L+ L+DP+V+S+ ++ ++ ++ ++L ++V YR++K+ +QLE
Sbjct: 1 MLDKLAGLEERYEKLNELLSDPDVISDTNKLREYSKEQSDLQDIVDAYREYKNINEQLEG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E D EM EMI E+ L ++ E++EKLK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKEMLQEE-TDPEMKEMIQQELDELEPQIPEIKEKLKILLLPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++ +S GG+K ++ I G YSKLKYE+G
Sbjct: 120 GDEAALFAGDLFRMYHRYAEAEGWKIDVMEASSTGVGGYKEIIFMINGKGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATV +PEA++VEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVVCLPEAEDVEVDIQEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +E++Q++NK +A+++LRA++Y++ +E Q ++ R S VGTG
Sbjct: 240 SAVRLTHVPTGIVVSMQDEKSQIKNKEKAMKILRARIYDMYQQEAQAELDQTRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ NRVTDHR+ + + L L+G + + + EQ +E + +
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLSEIIDALIMEEQAHKMEHVGD 356
>gi|419766759|ref|ZP_14292936.1| peptide chain release factor 1 [Streptococcus mitis SK579]
gi|419780291|ref|ZP_14306141.1| peptide chain release factor 1 [Streptococcus oralis SK100]
gi|383185450|gb|EIC77946.1| peptide chain release factor 1 [Streptococcus oralis SK100]
gi|383353799|gb|EID31402.1| peptide chain release factor 1 [Streptococcus mitis SK579]
Length = 359
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQTVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|347537871|ref|YP_004845295.1| peptide chain release factor 1 [Pseudogulbenkiania sp. NH8B]
gi|345641048|dbj|BAK74881.1| peptide chain release factor 1 [Pseudogulbenkiania sp. NH8B]
Length = 358
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 238/361 (65%), Gaps = 6/361 (1%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
+P + TKL A ++++ LA + ++KL + AEL VV TY+ ++ CE
Sbjct: 2 KPSIATKLSQLADRLEEVTHLLASEAATRDMDSFRKLTREHAELTPVVETYQAYRLCESD 61
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
L A A E D +M E +EI + L+ +L+ LLLP DP D +NI LE+RA
Sbjct: 62 L----ATATEMLADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRA 117
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA ++AGDL+RMY +++E+N W+ ++SSSE++ GG+K V++ + G +S+LK+
Sbjct: 118 GTGGDEAALFAGDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKF 177
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNV 289
ESG HRVQRVP TE QGR+HTS TVA+MPEA+E+ EVV++P D+ + T R+ GAGGQ++
Sbjct: 178 ESGGHRVQRVPATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHI 237
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
NK ++A+ + H PTGI C + R+Q NK+ A+Q+L A++Y+I++R QQ+ + +R S
Sbjct: 238 NKTDSAVRITHLPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLRAQQQSVAAERKSL 297
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+G+G R+E+IRTYNY R+TDHR+ + ++L +DG++ + A Q ELL +
Sbjct: 298 IGSGDRSERIRTYNYPQGRITDHRINLTLYKLDQVMDGDLFELTDALIAEHQAELLAAMG 357
Query: 409 E 409
+
Sbjct: 358 D 358
>gi|119361511|sp|Q2KZZ3.2|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
Length = 360
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 238/360 (66%), Gaps = 6/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE A ++ LADP+ + +++L++ AEL+ VV + F+ + L
Sbjct: 5 MLGRLEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADL-- 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A A+E D EM M EIK+ + LE +L+VLLLP DP D R++ LE+RAG G
Sbjct: 63 --ATAQEMLADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ +++GDL+RMY +Y+E W+ ++S S +E GG+K V+ I G+ Y +LK+ESG
Sbjct: 121 GDESALFSGDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TEAQGR+HTS TVA+MPEADE+ ++VI+P D+ + T R+ GAGGQ++NK
Sbjct: 181 AHRVQRVPATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKT 240
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C ++R+Q +NK RA+Q+L A+L + ++RE+Q K +R S VG+
Sbjct: 241 DSAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQSKEAAERKSLVGS 300
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
G R+E+IRTYNY RVTDHR+ + ++L L+G+++ + A Q E L L E +
Sbjct: 301 GDRSERIRTYNYPQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQAEQLAALGEDI 360
>gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 356
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 242/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ +S GG+K ++ I G+ YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQ 353
>gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300]
gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300]
gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
Length = 359
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEDMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
Length = 364
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 244/360 (67%), Gaps = 2/360 (0%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE + ++++S L+D V++N +++++L++ AE++ VV ++ ++ +
Sbjct: 3 PSIQSRLEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLVDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E+R L+K+ D +M EM E+ + EL+ +L+ L+LP DP D +N+ LEVRAG
Sbjct: 63 NEARELSKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVRAG 122
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA I+AGDL RMY +++E+ W+ ++S+SE E GG+K V+ + G+ VY LK+E
Sbjct: 123 TGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLKFE 182
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SGVHRVQRVP+TE+QGR+HTS TVA+MPEADE E V I+ D+ + T R+ GAGGQ+VN
Sbjct: 183 SGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQHVN 242
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H P+G+ + C EER+Q +N+++A+ LL ++L I+ + + R S V
Sbjct: 243 KTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKSLV 302
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYN+ +RVTDHR+ + ++L + G++D+ V+ Q ELL LA+
Sbjct: 303 GSGDRSERIRTYNFPQSRVTDHRINLTLYKLDEVIAGDLDSVVKPLLQEHQAELLAALAD 362
>gi|387886341|ref|YP_006316640.1| peptide chain release factor 1 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871157|gb|AFJ43164.1| peptide chain release factor 1 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 361
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 251/358 (70%), Gaps = 8/358 (2%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
TKL+S + +++S L + ++S+ ++++ L++ + L+ +V + FK+ + LE+
Sbjct: 7 TKLQSLIERHEEVSALLGEANIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKE 63
Query: 116 ALAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A + N D E+ EM E+K L+NE IE LE++L++LLLP DP D NI LE+RAG G
Sbjct: 64 AAYEMLNEKDVELVEMAKEELK-LANEAIERLEDELQILLLPRDPNDDANIFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL +MY KY+EQ WK ++S+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 123 GDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R + VG+
Sbjct: 243 DSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATMSD 360
>gi|398866181|ref|ZP_10621681.1| peptide chain release factor 1 [Pseudomonas sp. GM78]
gi|398241518|gb|EJN27168.1| peptide chain release factor 1 [Pseudomonas sp. GM78]
Length = 360
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 235/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V Y++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRAYSKEYAEVEPIVEAYKQLLKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ L+ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKERLVELEANLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNYAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|421277310|ref|ZP_15728130.1| peptide chain release factor 1 [Streptococcus mitis SPAR10]
gi|395876591|gb|EJG87667.1| peptide chain release factor 1 [Streptococcus mitis SPAR10]
Length = 359
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV IMPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|392531968|ref|ZP_10279105.1| peptide chain release factor 1 [Carnobacterium maltaromaticum ATCC
35586]
gi|414082884|ref|YP_006991590.1| peptide chain release factor 1 [Carnobacterium maltaromaticum
LMA28]
gi|412996466|emb|CCO10275.1| peptide chain release factor 1 [Carnobacterium maltaromaticum
LMA28]
Length = 358
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 229/355 (64%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L L+DPEV+S+ L + A L E VS YR++K + +
Sbjct: 1 MYDKLQGVEGRYEELGELLSDPEVISDTKRLMALTKEEANLRETVSVYRRYKVVVDDIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + EN D +MAEM E+ +L E LEE +K+LLLP D D +NI++E+R AG
Sbjct: 61 TEEMLGEN-LDSDMAEMAKEELSALKKEKEALEETIKILLLPKDENDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL MYQKY+E WK ++ ++ GG+K ++ I GN V+SKLKYESG
Sbjct: 120 GDEAALFAGDLFGMYQKYAEGQGWKTEVLEANITGIGGYKEIIFMITGNNVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ I KDI + GAGGQ+VNK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEINIADKDIRTDIYHASGAGGQHVNKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+Q++N+ +A+++LRA++Y+ E Q + R S +GTG
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKILRARVYDQIRNEAQSEYDANRKSAIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D V + +Q E LE++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIVYDQTEKLEQM 354
>gi|417940326|ref|ZP_12583614.1| peptide chain release factor 1 [Streptococcus oralis SK313]
gi|343389207|gb|EGV01792.1| peptide chain release factor 1 [Streptococcus oralis SK313]
Length = 359
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVIQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|404378163|ref|ZP_10983261.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
Length = 358
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 242/360 (67%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P L+ KL++ A ++++ L PE +N Y+KL Q AEL +V TY++++ E L
Sbjct: 3 PSLLDKLQNLAHRLEEVTALLGSPEATANMDNYRKLNQEHAELTPIVETYQQYRQAESDL 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
A A+E +D EM + A EI+ ++ +L+ +L+ LLLP D D +NI +E+RAG
Sbjct: 63 ----ADAQEMLSDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA ++AGDL+RMY +++E+N W+ ++S+SE++ GG+K V++ + G YSKLK+E
Sbjct: 119 TGGDEAALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE+QGR+HTS TVA+MPEADE+ E+ ++P D+ + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H PTG+ + C + R+Q NK++A+++L A+L + + RE Q K +R S +
Sbjct: 239 KTDSAIRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSF-LDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY RVTDHR+ + F +DG+++ + A Q ELL + +
Sbjct: 299 GSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQAELLAAMGD 358
>gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
49296]
gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334]
gi|401683572|ref|ZP_10815458.1| peptide chain release factor 1 [Streptococcus sp. BS35b]
gi|406577039|ref|ZP_11052659.1| peptide chain release factor 1 [Streptococcus sp. GMD6S]
gi|406586537|ref|ZP_11061466.1| peptide chain release factor 1 [Streptococcus sp. GMD1S]
gi|417848437|ref|ZP_12494382.1| peptide chain release factor 1 [Streptococcus mitis SK1073]
gi|417849183|ref|ZP_12495108.1| peptide chain release factor 1 [Streptococcus mitis SK1080]
gi|417934591|ref|ZP_12577911.1| peptide chain release factor 1 [Streptococcus mitis bv. 2 str.
F0392]
gi|418975326|ref|ZP_13523235.1| peptide chain release factor 1 [Streptococcus oralis SK1074]
gi|419778425|ref|ZP_14304316.1| peptide chain release factor 1 [Streptococcus oralis SK10]
gi|419782709|ref|ZP_14308507.1| peptide chain release factor 1 [Streptococcus oralis SK610]
gi|419814906|ref|ZP_14339635.1| peptide chain release factor 1 [Streptococcus sp. GMD2S]
gi|419819508|ref|ZP_14343222.1| peptide chain release factor 1 [Streptococcus sp. GMD4S]
gi|421289646|ref|ZP_15740397.1| peptide chain release factor 1 [Streptococcus pneumoniae GA54354]
gi|421304964|ref|ZP_15755620.1| peptide chain release factor 1 [Streptococcus pneumoniae GA62331]
gi|421488484|ref|ZP_15935872.1| peptide chain release factor 1 [Streptococcus oralis SK304]
gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
49296]
gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334]
gi|339452651|gb|EGP65274.1| peptide chain release factor 1 [Streptococcus mitis SK1073]
gi|339456810|gb|EGP69392.1| peptide chain release factor 1 [Streptococcus mitis SK1080]
gi|340771161|gb|EGR93676.1| peptide chain release factor 1 [Streptococcus mitis bv. 2 str.
F0392]
gi|383182922|gb|EIC75470.1| peptide chain release factor 1 [Streptococcus oralis SK610]
gi|383187264|gb|EIC79719.1| peptide chain release factor 1 [Streptococcus oralis SK10]
gi|383348697|gb|EID26656.1| peptide chain release factor 1 [Streptococcus oralis SK1074]
gi|395888887|gb|EJG99897.1| peptide chain release factor 1 [Streptococcus pneumoniae GA54354]
gi|395905626|gb|EJH16531.1| peptide chain release factor 1 [Streptococcus pneumoniae GA62331]
gi|400187650|gb|EJO21844.1| peptide chain release factor 1 [Streptococcus sp. BS35b]
gi|400367701|gb|EJP20716.1| peptide chain release factor 1 [Streptococcus oralis SK304]
gi|404454961|gb|EKA01846.1| peptide chain release factor 1 [Streptococcus sp. GMD4S]
gi|404460399|gb|EKA06665.1| peptide chain release factor 1 [Streptococcus sp. GMD6S]
gi|404470599|gb|EKA15213.1| peptide chain release factor 1 [Streptococcus sp. GMD2S]
gi|404473995|gb|EKA18317.1| peptide chain release factor 1 [Streptococcus sp. GMD1S]
Length = 359
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|423097283|ref|ZP_17085079.1| peptide chain release factor 1 [Pseudomonas fluorescens Q2-87]
gi|397884652|gb|EJL01135.1| peptide chain release factor 1 [Pseudomonas fluorescens Q2-87]
Length = 360
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+ Y++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVAAYKQLLKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLVELESSLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
Length = 356
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M EM+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAML-EDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ +S GG+K ++ I G YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQNRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQ 353
>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC198]
gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379716536|ref|YP_005304872.1| Peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725219|ref|YP_005317405.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TI0902]
gi|385793928|ref|YP_005830334.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis NE061598]
gi|421754782|ref|ZP_16191747.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700075]
gi|61214577|sp|Q5NIA8.1|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361541|sp|Q14JR1.1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC198]
gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis NE061598]
gi|377826668|gb|AFB79916.1| Peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TI0902]
gi|377828213|gb|AFB78292.1| Peptide chain release factor 1 [Francisella tularensis subsp.
tularensis TIGB03]
gi|409090449|gb|EKM90467.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700075]
Length = 361
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 249/357 (69%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V ++K+ LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKKYTQA---LEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++ LLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564]
gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564]
Length = 359
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKVEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|384161320|ref|YP_005543393.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208]
gi|384166224|ref|YP_005547603.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3]
gi|384170418|ref|YP_005551796.1| peptide chain release factor 1 [Bacillus amyloliquefaciens XH7]
gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208]
gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3]
gi|341829697|gb|AEK90948.1| peptide chain release factor 1 [Bacillus amyloliquefaciens XH7]
Length = 356
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M EM+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAML-EDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ +S GG+K ++ I G YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQNRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQ 353
>gi|383788519|ref|YP_005473088.1| peptide chain release factor 1 [Caldisericum exile AZM16c01]
gi|381364156|dbj|BAL80985.1| peptide chain release factor 1 [Caldisericum exile AZM16c01]
Length = 357
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 242/354 (68%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I +LE + + +LS L+D V+SNP ++K + EL+ +V+ Y K+K E +++
Sbjct: 1 MIDRLEKTVERYNELSRLLSDSSVISNPELFKKYSIEYKELEPIVNLYIKYKKVELEIKG 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L + D E+ E+ +E++ L E + ++K+LL+P DP + +NI++E+RAG G
Sbjct: 61 VQELLE--TEDPELQELSQTELEHLEEEKERILNEIKILLIPKDPYEGKNIIMEIRAGVG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL +MY Y+++ W+ ++ S E + GGFK V+ + G VY LKYESG
Sbjct: 119 GEEAALFAKDLYKMYLGYADKMGWRVEILDSHETDLGGFKEVIFSVSGKDVYKHLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TEA GR+HTSTATVA++PEA+EV+V I+P D+ + + G GGQNV KV
Sbjct: 179 VHRVQRVPETEASGRIHTSTATVAVLPEAEEVDVQINPDDLRIDIFHASGHGGQNVQKVA 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAI + HKPTGI + C +ER+QLQNK +A+++LRA+L ++ ++++++I + R +Q+G G
Sbjct: 239 TAIRIIHKPTGIMVTCQDERSQLQNKIKAMRILRARLLDLYEQQKEQEITSTRRAQIGRG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R E+IRTYN+ RVTDHR+ ++ + L ++GN+D V + E+ +LLEE
Sbjct: 299 NRNERIRTYNFPQGRVTDHRINLSLYNLPEIMEGNLDELVNALMENERAQLLEE 352
>gi|385793515|ref|YP_005826491.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
Length = 361
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 250/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR- 115
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQT 64
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
A N D E+ EM E+K L+NE IE LE +L++LLLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|419448662|ref|ZP_13988659.1| peptide chain release factor 1 [Streptococcus pneumoniae 4075-00]
gi|379623720|gb|EHZ88353.1| peptide chain release factor 1 [Streptococcus pneumoniae 4075-00]
Length = 359
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|354558869|ref|ZP_08978122.1| Peptide chain release factor 1 [Desulfitobacterium metallireducens
DSM 15288]
gi|353545193|gb|EHC14645.1| Peptide chain release factor 1 [Desulfitobacterium metallireducens
DSM 15288]
Length = 356
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + +L+ L+DPEV+SN E+QK A++ A + +V +R+++ K LE+
Sbjct: 1 MLEKLTEIEQRYDELTQLLSDPEVISNQEEWQKHAKAQAGMTGIVEAFREYQGVLKGLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +L E D E EM E + L+++ ELE ++KVLLLP DP D +N+++E+RAGAG
Sbjct: 61 TESLLSEK-LDPEFKEMAELEREELASKREELEARMKVLLLPKDPNDDKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL +MY KY+E+ W+ L+++S + GGFK +V ++G YSKLK+ESG
Sbjct: 120 GEEAALFAGDLYKMYTKYAERQGWRTELMNASYTDIGGFKEIVFLVEGQGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTST TVA++PEA+EVEV I P DI + + G GGQ VN +
Sbjct: 180 VHRVQRIPATESGGRIHTSTTTVAVLPEAEEVEVDIKPNDIRIDLFCASGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C +E++QL+NK +A+++LRA+L E E ++ + R SQVGTG
Sbjct: 240 SAVRITHLPTGTVVSCQDEKSQLKNKDKAMRVLRARLLEKAQEEAHGEMASARKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ + + S L G++D +++ +Q E L+ AE
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHRIDSILLGDLDEIIETLITTDQAERLKTEAE 356
>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
gi|259585227|sp|C3KDC6.1|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
Length = 360
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLTKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
Length = 361
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 251/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEVGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++LLLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
Length = 361
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 248/356 (69%), Gaps = 6/356 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V ++++ K ++ A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALK--DKQAA 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
N D E+ EM E+K L+NE IE LE +L++LLLP DP D N+ LE+RAG GGD
Sbjct: 66 YEMLNEKDAELVEMAKEELK-LANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGD 124
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG H
Sbjct: 125 EASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAH 184
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK ++
Sbjct: 185 RVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDS 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 245 AIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 305 RSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|419493314|ref|ZP_14033040.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47210]
gi|379593489|gb|EHZ58301.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47210]
Length = 359
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDTDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|338997725|ref|ZP_08636417.1| peptide chain release factor 1 [Halomonas sp. TD01]
gi|338765354|gb|EGP20294.1| peptide chain release factor 1 [Halomonas sp. TD01]
Length = 362
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 247/360 (68%), Gaps = 5/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+S A +++L++ L+DPEV++N ++ ++ AEL+E+V+ ++++ + EK +EE
Sbjct: 5 LRQRLDSFADRFEELAMLLSDPEVINNQQRFRDYSREYAELEELVAAWQRYGEVEKSIEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L++++ D EM E+ EI +L L+ +LK LL+P DP D R + LEVRAG G
Sbjct: 65 AVQLSRDS--DPEMRELAEMEINDGREQLEALDIELKRLLVPKDPDDGRGVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ W+ ++S+S E+GG+K V+ +KG+ VY++LK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAEKRGWRVEVVSASHGEQGGYKEVISRVKGDGVYARLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+MPE ++V ++ I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMPEVEDVGDIDINPSDLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG+ + C EER+Q +N+++A+ LL AKL V Q+++ R S VG+
Sbjct: 243 DSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQEQADARRSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDG-NIDNAVQSCAAMEQKELLEELAES 410
G R+E+IRTYN+ R+TDHR+ + ++LT + G +D+ ++ Q E L L ++
Sbjct: 303 GDRSERIRTYNFPQGRITDHRINLTLYKLTEIITGEQLDDVIEPLIHEYQAEQLSALQDA 362
>gi|422648190|ref|ZP_16711314.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 360
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y++ + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L++LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143]
gi|417916081|ref|ZP_12559673.1| peptide chain release factor 1 [Streptococcus mitis bv. 2 str.
SK95]
gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143]
gi|342831388|gb|EGU65705.1| peptide chain release factor 1 [Streptococcus mitis bv. 2 str.
SK95]
Length = 359
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 239/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIID 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K +E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
gi|156866495|gb|EDO59867.1| peptide chain release factor 1 [Clostridium leptum DSM 753]
Length = 358
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 243/358 (67%), Gaps = 1/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE K +++ + KL DP VVS+P Y L + + L+ VV Y+++K + EE
Sbjct: 1 MFDRLEVFEKKYEECNQKLYDPAVVSDPEAYAALMKEVKGLEPVVEKYKEYKKQKNNEEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E G +++ EM+ E++ L ++ E+LK+LLLP DP D RN+++E+R GAG
Sbjct: 61 AKQLLAEGGLEKDFREMVELELEEARESLEKISEELKILLLPKDPNDDRNVIVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA +++ L RMY Y+E WK +++++E E GG+K + I G YS++KYESG
Sbjct: 121 GEEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE QGR+HTST TVA++PEA++VEV I+P D+++ T RSGGAGGQ++NK +
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLPEAEDVEVEINPSDLKIDTFRSGGAGGQHINKTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +ER+Q +NK +A+++L+++L E + +QQ ++ +R SQVGTG
Sbjct: 241 SAIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQNEVAQERKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + + L ++GN+D + + ++ LE E
Sbjct: 301 DRSERIRTYNFPQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALITADRAAKLESTIEG 358
>gi|410664416|ref|YP_006916787.1| peptide chain release factor 1 [Simiduia agarivorans SA1 = DSM
21679]
gi|409026773|gb|AFU99057.1| peptide chain release factor 1 [Simiduia agarivorans SA1 = DSM
21679]
Length = 362
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 234/354 (66%), Gaps = 4/354 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLES A ++++S L+DP+++ + + ++ L++ AEL+ V+ +RK+ E++
Sbjct: 8 KLESLADRYEEVSALLSDPDIIGDQNRFRDLSREYAELEPVIQCFRKYLSLTADRNEAKE 67
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L K++ D EM EM I +L L +L+VLLLP DP D +N+ LE+RAG GGDE
Sbjct: 68 LLKDS--DPEMREMAQMTIDECDEQLEPLAAELQVLLLPKDPNDHKNVYLEIRAGTGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I++GDL RMY KY+E W+ ++S S E GG+K ++ + G VYS+LK+ESG HR
Sbjct: 126 AAIFSGDLFRMYSKYAESRGWRIEIMSESAGEHGGYKEIITRVVGQGVYSQLKFESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP+TE+QGR+HTS TVA+MPEADE EV ++ D+ + T RS GAGGQ+VN ++A
Sbjct: 186 VQRVPETESQGRIHTSACTVAVMPEADEQEEVNLNKNDLRIDTFRSSGAGGQHVNTTDSA 245
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
I + H PTGI + C +ER+Q +NK+RA+ LL AK+ + + I ++R S VG+G R
Sbjct: 246 IRIVHIPTGIVVECQDERSQHKNKARAMSLLAAKIASSQQEQAAAAIASERRSLVGSGDR 305
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+E+IRTYNY RVTDHR+ + ++L+ ++G +D VQ Q +LL LA
Sbjct: 306 SERIRTYNYPQGRVTDHRINLTLYKLSEIMEGKLDEVVQPLVQEHQADLLASLA 359
>gi|313206514|ref|YP_004045691.1| peptide chain release factor 1 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|383485816|ref|YP_005394728.1| bacterial peptide chain release factor 1 (brfgene) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386321495|ref|YP_006017657.1| Protein chain release factor A [Riemerella anatipestifer RA-GD]
gi|407451640|ref|YP_006723364.1| protein chain release factor A [Riemerella anatipestifer RA-CH-1]
gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD]
gi|380460501|gb|AFD56185.1| bacterial peptide chain release factor 1 (brfgene) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403312624|gb|AFR35465.1| Protein chain release factor A [Riemerella anatipestifer RA-CH-1]
Length = 362
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 243/360 (67%), Gaps = 3/360 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KLE+ + + +++ + P+V+S+ Y L + ++L ++V + ++ ++E
Sbjct: 5 LIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVKVFDEYSTALNAIKE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +G+D+++ ++ E + + + +EE+LK LL+P DP D +N+M+E+RAG G
Sbjct: 65 ADEIIA-DGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ I+ D+ RMY Y + WK + S+EA KG +K ++M ++G+ VY +K+ESG
Sbjct: 124 GDESAIFVEDVYRMYTMYFKSKGWKHEVTDSNEASKG-YKELIMRVEGDGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKPTGI + C + R+QL N+ A+++LR KLY+I++++ Q I QR + V TG
Sbjct: 243 TKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R+ KIRTYNY RVTDHR+ K + L +F++G+I + + E E ++ E++G
Sbjct: 303 DRSAKIRTYNYPQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAENAEKMKGEEENIG 362
>gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 360
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 241/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ ++++ + K L L DPEV+ +PS+ Q +A+ +L E++S Y +++ Q+EE
Sbjct: 5 ILDQIKNIEEKVKKLEQLLTDPEVLKDPSKIQSIAKEHKDLSEILSLYNQYEKVNFQIEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L D+ + ELE+K+++ LP DP D +N++LE+R G G
Sbjct: 65 VKQLINSTTEDDLRELAELELEELKQELS-ELEKKIELAFLPKDPNDEKNVILEIRQGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMYQ+Y+E++ WK ++S ++GG K V+ IKG YS+LKYESG
Sbjct: 124 GEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALIKGKGAYSRLKYESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA++PEA+EV++ I P+D+++ T R+GGAGGQ+VN +
Sbjct: 184 VHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEDLKIETMRAGGAGGQHVNTTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +ER+QLQNK +A+Q+LRA+L + R ++EKI +R QVGTG
Sbjct: 244 SAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLKDYYDRLEREKIAKERKEQVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+ NRVTDHR+ ++ + LDG++D ++ A E +E L +L
Sbjct: 304 ERSEKIRTYNFPQNRVTDHRVNYTSYRINDILDGDLDEIIEVLIAKENEEKLAKL 358
>gi|365134366|ref|ZP_09343245.1| peptide chain release factor 1 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363614327|gb|EHL65824.1| peptide chain release factor 1 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 360
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 232/352 (65%), Gaps = 1/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+IT+L + + +++ +L DP V++N Y+ L + L +V Y + + +E
Sbjct: 3 MITQLRAVRNRYDEINNQLQDPTVINNNELYRSLMKDYKNLTPIVEAYDAYDAAKGAFDE 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E G D E E+ +E + ++ LEE+LK+LLLP D D R++++E+R GAG
Sbjct: 63 AKEMLDEGGLDAEFKELAQAEYEENKEKMAFLEERLKILLLPKDENDDRSVIVEIRGGAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A L RMY Y+E WK +++++E E GG K V I+G YS+LK+ESG
Sbjct: 123 GEEAALFAHSLFRMYTMYAETRGWKYEVLNANETELGGVKEVSFSIEGEGAYSRLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE QGRVHTST TVA+MPEA+EVE+ I+P D+++ T RS GAGGQ++NK
Sbjct: 183 VHRVQRVPETETQGRVHTSTVTVAVMPEAEEVEIDINPADLKIDTFRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C +ER+Q +NK +AL++LR++L K E KI +R SQVGTG
Sbjct: 243 SAIRVTHLPTGVVVECQDERSQYKNKDKALKVLRSRLLAQKQAEHDSKIAAERRSQVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYNY R+TDHR+ + ++L + L+G +D V + +Q E L
Sbjct: 303 DRSERIRTYNYPQGRLTDHRIGLTLYKLDTILNGVLDEVVDALVTADQAEKL 354
>gi|402300805|ref|ZP_10820255.1| peptide chain release factor 1 [Bacillus alcalophilus ATCC 27647]
gi|401724072|gb|EJS97472.1| peptide chain release factor 1 [Bacillus alcalophilus ATCC 27647]
Length = 356
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 237/352 (67%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + L+ L+DP+V+S+ + ++ ++ + ++E V YR++K+ +QL++
Sbjct: 1 MLERLQSVEDRYNRLNELLSDPDVISDSKKLREYSKEQSNIEETVQVYREYKEVAEQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E D EM EM+ EI LS ELEE L++LLLP DP D +N+++E+R AG
Sbjct: 61 AKQMLEEK-LDNEMYEMVKEEINELSPRQKELEESLRILLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY +++E W+ +I ++ E GG+K ++ + G YSKLKYE+G
Sbjct: 120 GDEAQLFAGDLYKMYSRFAEAQGWRTEVIEATSTELGGYKEIIFMVNGAGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+ GR+HTSTATVA++PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPQTESGGRIHTSTATVAVLPEAEEVEVEIHDKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG + C +E++Q++NK +A+++LRA++Y+ RE Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKIQREVQAEYDETRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ +RVTDHR+ + + L L G ID + + EQ E +
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLQKLDQILQGKIDEIIDALIVEEQAEQM 351
>gi|418976733|ref|ZP_13524589.1| peptide chain release factor 1 [Streptococcus mitis SK575]
gi|383351066|gb|EID28897.1| peptide chain release factor 1 [Streptococcus mitis SK575]
Length = 359
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGEDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|438118391|ref|ZP_20871368.1| peptide chain release factor 1 [Spiroplasma melliferum IPMB4A]
gi|434155818|gb|ELL44736.1| peptide chain release factor 1 [Spiroplasma melliferum IPMB4A]
Length = 358
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 233/348 (66%), Gaps = 2/348 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
I +LE+ K W ++ +L PE+V++ + LA+ A+L+E V+ Y +K+ + E+
Sbjct: 6 IERLETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLNNINEA 65
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ L E D E+ E+ E+K+ +L +LKV+LLP DP D +N++ E+R AGG
Sbjct: 66 K-LILETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGG 124
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DE I+AGDL RMY KY+EQ WK LI ++E+E GGF T+ +KG+RVYSK+K+ESG
Sbjct: 125 DEGNIFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGA 184
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQR+P+TE++GRVHTSTATVA++PE +EV+ I D+++ T R+ GAGGQ+VN ++
Sbjct: 185 HRVQRIPKTESKGRVHTSTATVAVLPEIEEVDFEIKTADLKIDTYRASGAGGQHVNTTDS 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTG+ + + R+Q NK+ A+Q LR+KLYE + R+ E+ T R VGTG
Sbjct: 245 AVRITHLPTGVVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERGTLRKDAVGTGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQK 401
R+EKIRTYNY NRVTDHR+ + + L ++GN+D V + EQ+
Sbjct: 305 RSEKIRTYNYPQNRVTDHRINLTLQKLDQIMEGNLDEIVVALINEEQR 352
>gi|325105445|ref|YP_004275099.1| peptide chain release factor 1 (bRF-1) [Pedobacter saltans DSM
12145]
gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
saltans DSM 12145]
Length = 358
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 234/356 (65%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE+ D+ +L++PE + + +L + +L +V Y K+K+ +
Sbjct: 1 MLDKLEAIKLRRDDVERELSNPEATQDMKRFAQLNKEYKDLGLIVDEYYKYKNVVSNIAT 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + N D+E+ EM E+ L E E+E K++++L+P DP D ++ ++E+R G G
Sbjct: 61 NKDILA-NEKDQELREMAKEELDVLIPEKEEMEAKIRLMLVPKDPGDEKDAIVEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y E W+ ++ ++ GG+K VV ++ G VY LKYESG
Sbjct: 120 GDEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGTNGGYKEVVFKVSGEDVYGTLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGRVHTS A+VA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 180 VHRVQRVPDTETQGRVHTSAASVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKPTGI + C ER+QL N+ RA+++LR+KLYE ++ + E+I ++R + V TG
Sbjct: 240 TKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLRSKLYERELAKYNEEIASKRKTMVSTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+ KIRTYNY RVT+HR+ + + L + ++G I + + E E L+E A
Sbjct: 300 DRSAKIRTYNYPQGRVTEHRIGLTLYNLPAVMNGEIQEILDALQFAENAEKLKEGA 355
>gi|395650290|ref|ZP_10438140.1| peptide chain release factor 1 [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 360
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ VV+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPVVATYKNLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella novicida U112]
gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella novicida FTE]
gi|166223559|sp|A0Q844.1|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
novicida FTE]
Length = 361
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 251/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++LLLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|452944167|ref|YP_007500332.1| peptide chain release factor 1 [Hydrogenobaculum sp. HO]
gi|452882585|gb|AGG15289.1| peptide chain release factor 1 [Hydrogenobaculum sp. HO]
Length = 356
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 247/356 (69%), Gaps = 8/356 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K++ + + KLA ++ + Y+ L++ + EL + Y+ + K +E+
Sbjct: 6 FLEKIQDIEQKYLQTEEKLASLDITKDADTYKALSKDLKELSYIHELYKDYNKILKDIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L K D+++ E+ E+++L+ +L++ E++L +L P D D++N++LE+RAGAG
Sbjct: 66 TKELLK----DKDLRELAEKELENLNIKLLQKEKELINVLTPKDANDSKNVILEIRAGAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL+RMYQ+Y+E+ WK ++ +++ GG+K V++ I+G VYS LKYESG
Sbjct: 122 GEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHLKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA++PEADE EV+I+P+D+ + T R+ GAGGQ VN E
Sbjct: 182 VHRVQRVPITESGGRIHTSTITVAVLPEADETEVIINPQDLRIETFRASGAGGQYVNTTE 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI I C +ER+QLQNK +A+++L A+L + ++++E+ +R QVGTG
Sbjct: 242 SAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETDKERKEQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+EKIRTYN+ NRVTDHR+ + +L LDG++D+ + +A++ KEL E+LA
Sbjct: 302 ERSEKIRTYNFSQNRVTDHRINLTLHKLQDVLDGDLDDII---SALQAKELEEKLA 354
>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
642]
Length = 360
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y + + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|374607102|ref|ZP_09679907.1| peptide chain release factor 1 [Paenibacillus dendritiformis C454]
gi|374387321|gb|EHQ58838.1| peptide chain release factor 1 [Paenibacillus dendritiformis C454]
Length = 357
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 242/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S A + LS L DP+V ++P + + ++ ++L Y ++K+ +L+
Sbjct: 1 MLDRLQSLADRYDKLSELLCDPDVANDPKKLRDYSKEQSDLQPAYEAYMEYKNVISELDA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E +D+ M EM+ EI+ L ++LEE+++VLLLP DP D +N+++E+R AG
Sbjct: 61 AKAMLQEKLDDD-MREMVKMEIEELEERKVKLEERIRVLLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y++ W+ L+ ++ ++ GGFK V+ + G YSKLKYESG
Sbjct: 120 GDEAALFASDLYRMYTRYADAQGWRTELMEANISDLGGFKEVIFLVSGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTST+TVA+MPE DEVEV I KDI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPATESGGRIHTSTSTVAVMPEIDEVEVEILDKDIRVDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C + ++Q NK +ALQ+LRA++++IK +E++ K +R S+VGTG
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNDNKVKALQVLRARIFDIKRQEEEAKYAGERKSKVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ +RVTDHR+ + +L ++G+++ +Q+ EQ EL+E
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDQVMNGDMEEIIQALTLTEQAELME 352
>gi|421858743|ref|ZP_16291003.1| protein chain release factor A [Paenibacillus popilliae ATCC 14706]
gi|410831713|dbj|GAC41440.1| protein chain release factor A [Paenibacillus popilliae ATCC 14706]
Length = 357
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S A + LS L DP+V S+P + + ++ ++L Y ++K+ + +L+
Sbjct: 1 MLDRLQSLADRYDKLSELLCDPDVASDPKKLRDYSKEQSDLQPAYEAYMEYKNVKSELDT 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E +D+ M EM+ EI+ L ++LEE +++LLLP DP D +N+++E+R AG
Sbjct: 61 AKAMLQEKLDDD-MREMVKMEIEELEERKVKLEEHIRLLLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL RMY +Y++ W+ L+ ++ ++ GGFK V+ + G YSKLKYESG
Sbjct: 120 GDEAALFAADLYRMYTRYADAQGWRTVLMEANISDLGGFKEVIFLVSGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTST+TVA+MPE DEV+V I KDI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPATESGGRIHTSTSTVAVMPEIDEVDVEILDKDIRVDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C + ++Q NK +ALQ+LRA++Y+IK +E++ K +R S+VGTG
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNDNKEKALQVLRARIYDIKRQEEEAKYAGERKSKVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ +RVTDHR+ + +L ++G+++ +Q+ EQ E +E
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHKLDQVMNGDVEEIIQALTLTEQAERME 352
>gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
gi|358464983|ref|ZP_09174941.1| peptide chain release factor 1 [Streptococcus sp. oral taxon 058
str. F0407]
gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
gi|357066512|gb|EHI76662.1| peptide chain release factor 1 [Streptococcus sp. oral taxon 058
str. F0407]
Length = 359
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIID 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|417924285|ref|ZP_12567731.1| peptide chain release factor 1 [Streptococcus mitis SK569]
gi|418968115|ref|ZP_13519742.1| peptide chain release factor 1 [Streptococcus mitis SK616]
gi|342836072|gb|EGU70295.1| peptide chain release factor 1 [Streptococcus mitis SK569]
gi|383341241|gb|EID19505.1| peptide chain release factor 1 [Streptococcus mitis SK616]
Length = 359
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASSRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|443631133|ref|ZP_21115314.1| peptide chain release factor 1 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348938|gb|ELS62994.1| peptide chain release factor 1 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 356
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY +Y+E WK ++ +S GG+K ++ I G+ YSKLKYE+G
Sbjct: 120 GEEAALFAGSLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQ 353
>gi|423399829|ref|ZP_17377002.1| peptide chain release factor 1 [Bacillus cereus BAG2X1-2]
gi|423461887|ref|ZP_17438683.1| peptide chain release factor 1 [Bacillus cereus BAG5X2-1]
gi|423479479|ref|ZP_17456194.1| peptide chain release factor 1 [Bacillus cereus BAG6X1-1]
gi|401134064|gb|EJQ41683.1| peptide chain release factor 1 [Bacillus cereus BAG5X2-1]
gi|401656890|gb|EJS74403.1| peptide chain release factor 1 [Bacillus cereus BAG2X1-2]
gi|402425783|gb|EJV57929.1| peptide chain release factor 1 [Bacillus cereus BAG6X1-1]
Length = 355
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M +M+ E+ L + EL E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDADMRDMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEISIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
700779]
gi|419843979|ref|ZP_14367284.1| peptide chain release factor 1 [Streptococcus infantis ATCC 700779]
gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
700779]
gi|385702403|gb|EIG39548.1| peptide chain release factor 1 [Streptococcus infantis ATCC 700779]
Length = 359
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|399517412|ref|ZP_10758963.1| Peptide chain release factor 1 [Leuconostoc pseudomesenteroides
4882]
gi|398647691|emb|CCJ66990.1| Peptide chain release factor 1 [Leuconostoc pseudomesenteroides
4882]
Length = 356
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 236/355 (66%), Gaps = 5/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + +L+ +LADPEV+++ Y L++ + E V Y +++ + +++
Sbjct: 4 IFQQLQTVVDRYDELNEQLADPEVMNDGQHYMALSKEAGSIRETVEVYHRYQQVIQDIQD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L +D EMA + ++ SL E ELE+KLKVL+LP DP D +NI++E+R AG
Sbjct: 64 AQDLL----DDPEMAPLAKEDLNSLKPEQEELEDKLKVLMLPQDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ +W ++I S E GG+K V + I G+ VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAERQNWSLSIIDESTTEVGGYKEVAVMITGDSVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTS ATV +MPE ++++ ++ D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPATETQGRVHTSIATVGVMPEFEDIDFELNESDLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + + +R S VGTG
Sbjct: 240 TAVRLIHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G++ + + +Q L EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGDLGEVIDALVIADQTAKLAEL 354
>gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
gi|158449450|gb|EDP26445.1| peptide chain release factor 1 [Coprococcus eutactus ATCC 27759]
Length = 358
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 247/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++ +L DP+VV++ ++++KL + ++L +V Y+++KD + +E+
Sbjct: 1 MFDRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E + EE+ EM E+ + L +E++LK+LLLP DP D++N+++E+RAGAG
Sbjct: 61 SLEILEEEND-EELREMAKEEMNDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMYQKY +Q WK L+S +E GGFK V I G+ YSK+KYESG
Sbjct: 120 GDEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P+TE+ GR+HTST TVA+MPEA+EV+V I+ DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRIPKTESGGRIHTSTVTVAVMPEAEEVDVEINDNDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK++A LLR+KLY++++++Q + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRKSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ + RVTDHR+K+ ++L ++G+++ + S A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQTAKLAQVNE 356
>gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
51100]
gi|417921893|ref|ZP_12565383.1| peptide chain release factor 1 [Streptococcus cristatus ATCC 51100]
gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
51100]
gi|342833778|gb|EGU68058.1| peptide chain release factor 1 [Streptococcus cristatus ATCC 51100]
Length = 359
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|419800036|ref|ZP_14325347.1| peptide chain release factor 1 [Streptococcus parasanguinis F0449]
gi|385696405|gb|EIG26893.1| peptide chain release factor 1 [Streptococcus parasanguinis F0449]
Length = 359
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
Length = 355
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 243/347 (70%), Gaps = 4/347 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLES + WK+L ++ DP ++ N + Y++ + A L +++ Y ++ E+++ ++RA
Sbjct: 4 KLESLSVRWKELEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQTRA 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ +E D E+ EM E+ +L +L + E LKVLL+P DPL+ +NI++E+R G GG+E
Sbjct: 64 MMQEE-TDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTGGEE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL++MY Y+E +WK ++SS+E E GGFK V + I G VY L+YESGVHR
Sbjct: 123 AALFAADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE GR+HTS TVA++PEA+E E+VI +D+ + R+GG GGQ VN ++A+
Sbjct: 183 VQRVPETEGSGRIHTSAVTVAVLPEAEETEIVIKQEDLRIDVMRAGGPGGQCVNTTDSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +E++Q++NK++A+++LR++LY+++ ++Q + R +QVG+G R+
Sbjct: 243 RITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQSERAEDRKNQVGSGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQS-C-AAMEQ 400
E+IRTYNY NRVTDHR+ + ++L + + G+++ V++ C AA EQ
Sbjct: 303 ERIRTYNYPQNRVTDHRINLTLYKLDTIMQGDLNEIVEALCIAAREQ 349
>gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 358
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 242/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAMLEEKL-DAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G R ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRXHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 355
>gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822]
gi|46576758|sp|Q7WCE3.1|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis]
Length = 360
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 240/362 (66%), Gaps = 6/362 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE A ++ LA+PE ++ ++KL++ AEL+ VV + F E +
Sbjct: 3 PSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADV 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
A A+E +D +M M EIK+ + E+E L++LLLP DP D R++ LE+RAG
Sbjct: 63 ----ATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ +++GDL+RMY +Y+E W+ ++S SE+E GG+K V++ I G+ Y +LK+E
Sbjct: 119 TGGDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TEAQGR+HTS TVA+MPEAD + ++VI+P D+ + T R+ GAGGQ++N
Sbjct: 179 SGAHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTG+ + C ++R+Q +NK +A+Q+L A+L + ++RE+Q K +R S +
Sbjct: 239 KTDSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY RVTDHR+ + ++L ++G++D + A Q E L L
Sbjct: 299 GSGDRSERIRTYNYPQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQAEQLAALGH 358
Query: 410 SV 411
+
Sbjct: 359 DL 360
>gi|416109751|ref|ZP_11591631.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM]
gi|442314285|ref|YP_007355588.1| Protein chain release factor [Riemerella anatipestifer RA-CH-2]
gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM]
gi|441483208|gb|AGC39894.1| Protein chain release factor [Riemerella anatipestifer RA-CH-2]
Length = 362
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 243/360 (67%), Gaps = 3/360 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KLE+ + + +++ + P+V+S+ Y L + ++L ++V + ++ ++E
Sbjct: 5 LIPKLEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVFDEYSTALNAIKE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +G+D+++ ++ E + + + +EE+LK LL+P DP D +N+M+E+RAG G
Sbjct: 65 ADEIIA-DGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ I+ D+ RMY Y + WK + S+EA KG +K ++M ++G+ VY +K+ESG
Sbjct: 124 GDESAIFVEDVYRMYTMYFKSKGWKHEVTDSNEASKG-YKELIMRVEGDGVYGIMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+QGRVHTS TVA++PEA+EV+V I+P DIE+ T+RSGGAGGQNVNKVE
Sbjct: 183 VHRVQRVPETESQGRVHTSAITVAVLPEAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
T + L HKPTGI + C + R+QL N+ A+++LR KLY+I++++ Q I QR + V TG
Sbjct: 243 TKVQLTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQGDIAAQRKTMVSTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESVG 412
R+ KIRTYNY RVTDHR+ K + L +F++G+I + + E E ++ E++G
Sbjct: 303 DRSAKIRTYNYPQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAENAEKMKGEEENIG 362
>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
Length = 358
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 242/353 (68%), Gaps = 6/353 (1%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
KLE+ +++L+ KL+ + S+ ++K+++ A+L ++ TY +K K +EE
Sbjct: 7 NKLENLILKYEELNNKLSSEGITSDLDLFKKISKEHADLTPIIETYSGYKKLVKNIEE-- 64
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
AKE +D EM E EI + +E+I E KL+ LL+P DP D +NI LE+RAG GGD
Sbjct: 65 --AKEMLSDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFLEIRAGTGGD 122
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
E+ ++A DL RMY +Y+E+N+W +ISS+E+ GG+K ++ +I G+ YSKLK+ESG H
Sbjct: 123 ESALFAADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYSKLKFESGGH 182
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVP TE QGR+HTS TVA++PEADE+E V I+P DI + T R+ GAGGQ++NK ++
Sbjct: 183 RVQRVPDTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAGGQHINKTDS 242
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H+PTGI + C ++R+Q +NK++A+ +L AK+ + +++ QQ + ++R S +G+G
Sbjct: 243 AVRITHEPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQAQQSQRASERKSLIGSGD 302
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ R+TDHR+ + +++ +DG+++ + + + Q LL E
Sbjct: 303 RSERIRTYNFPQGRITDHRINLTLYKIDFIMDGDLEEMINALSLEHQASLLAE 355
>gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241]
gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241]
gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 358
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 242/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 355
>gi|389686011|ref|ZP_10177334.1| peptide chain release factor 1 [Pseudomonas chlororaphis O6]
gi|399008556|ref|ZP_10711026.1| peptide chain release factor 1 [Pseudomonas sp. GM17]
gi|425901493|ref|ZP_18878084.1| peptide chain release factor 1 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388550353|gb|EIM13623.1| peptide chain release factor 1 [Pseudomonas chlororaphis O6]
gi|397883269|gb|EJK99755.1| peptide chain release factor 1 [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398115992|gb|EJM05763.1| peptide chain release factor 1 [Pseudomonas sp. GM17]
Length = 360
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVETYKQVLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLVELESTLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G ++ ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQADQLAALGE 360
>gi|399519470|ref|ZP_10760265.1| peptide chain release factor 1 [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112566|emb|CCH36823.1| peptide chain release factor 1 [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 360
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 240/358 (67%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ + +++L+ L D EV+S ++++ ++ AE++ V++T+R+ + + LE
Sbjct: 5 LLNKLDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQSDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E+ L+ LE+KL+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DADMREMAEEEVAQAKEALVTLEDKLQRMLLPKDPNDGRNVYLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S++E E GGFK V+ ++G+ VY+KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG + C EER+Q +N+++A+ L AKL + + ++I R VG+
Sbjct: 243 DSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKEISETRKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L + G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRINLTLYSLNDVIAGGVDAIIEPLLAEYQADQLAALGD 360
>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
Length = 361
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 234/354 (66%), Gaps = 3/354 (0%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P L +LE + + +LADP +V+N + K ++ AEL ++V +R + E++L
Sbjct: 5 PDLKARLEEVEARFNAVERELADPNIVANQENFMKRSKEHAELSQLVECFRSYNKYEQEL 64
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E++R L ++ DEE+A + E++ L++LE+++++LLLP DP D +N++LE+RAG
Sbjct: 65 EQNRLLMADD--DEELAALAGVEVEQAETALVDLEQRMRLLLLPQDPRDEKNVVLEIRAG 122
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA ++A +L+RMY +Y+E WK ++S GGFK V+ I G YS+LKYE
Sbjct: 123 TGGDEAALFAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALITGRGAYSQLKYE 182
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SG HRVQRVP TE+QGRVHTS TVA++PEADEVEV I P+++ + RS G GGQ+VN
Sbjct: 183 SGAHRVQRVPATESQGRVHTSAVTVAVLPEADEVEVDIKPEELRIDYFRSSGPGGQHVNT 242
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
++A+ + H PTG+ + C +E++Q +NK++AL++L A+L E +EQQ + R SQVG
Sbjct: 243 TDSAVRITHLPTGLVVSCQDEKSQHKNKAKALKVLAARLLEKMEQEQQAALAANRRSQVG 302
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
+G R+E+IRTYN+ RVTDHR+ + ++L L G ++ + A Q E L
Sbjct: 303 SGDRSERIRTYNFPQGRVTDHRIGLTIYKLEEVLVGELELIIPHLVAYFQAEAL 356
>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 360
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ + +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y++ + LE
Sbjct: 5 LLNKLDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLIKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M +M E++ +L++LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
Length = 364
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 247/362 (68%), Gaps = 4/362 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + +I KL+ +++S L DP+V+ + ++++ L++ ++L+EVV+T++++++ E
Sbjct: 1 MLQDSIIEKLQGLVDRHEEISALLGDPDVIGDQNKFRDLSKEYSQLEEVVNTFQRYEEAE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+ + + K+ D +M EM E+K ++ LE +++ LLLP DP D +N LE+
Sbjct: 61 ESLKAAEEMLKDE--DPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA I+AGDL RMY KY+E+ W+ +IS S+ E GG+K +++ I G+ VYS L
Sbjct: 119 RAGTGGDEAAIFAGDLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQ 287
K+ESG HRVQRVP+TE+QGR+HTS TVA+MPEADE++ + I+P D+++ T R+ GAGGQ
Sbjct: 179 KFESGAHRVQRVPETESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQ 238
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
+VNK ++AI + H PTG+ + C +ER+Q +NK++A+ +L+A+L + + Q + R
Sbjct: 239 HVNKTDSAIRITHLPTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAKAQSEQTEMRR 298
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
+ VGTG R+++IRTYN+ R+TDHR+ + ++L ++G+ID V Q + L
Sbjct: 299 NLVGTGDRSDRIRTYNFPQGRMTDHRINLTLYKLDEIMEGDIDQIVGPLIQEHQADQLAA 358
Query: 407 LA 408
L+
Sbjct: 359 LS 360
>gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
Length = 359
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 240/348 (68%), Gaps = 5/348 (1%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + L KL A K + L ++ DP++V + ++ ++++ + EL+E+ +++++
Sbjct: 1 MLQKELEDKLNLAEKRYLQLQAEVLDPDIVKDRLKFAQISKELKELEELHRLHQEYRKIL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+LEE++ L K + E+ + EIK L EL E+++K+ LLP D D++N++LE+
Sbjct: 61 KELEETKELLK----NPELEPLAKEEIKRLEKELESTEKRIKIHLLPKDERDSKNVILEI 116
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA ++A DL+ MYQ+Y+E+ WK +++S+ + GG+K V+ ++G YS+L
Sbjct: 117 RAGVGGEEAALFARDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRL 176
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TEA GR+HTSTATVA++PEADE EV IDPKD+++ T R+ AGGQ
Sbjct: 177 KYESGVHRVQRVPVTEAGGRIHTSTATVAVLPEADETEVHIDPKDLKIETFRASSAGGQY 236
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ETA+ + H PTGI + C +ER+Q QN+ +AL++L A+L + R+++E++ ++
Sbjct: 237 VNTTETAVRITHLPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAKEKRE 296
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSC 395
Q+GTG R+EKIRTYN+ NRVTDHR+ + + L L+G +D + +
Sbjct: 297 QIGTGERSEKIRTYNFIQNRVTDHRINLTIYRLQDVLEGKLDEIIDAL 344
>gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
Length = 358
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD QL +
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQLRD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D +M EM+ E+ L + EL E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAMLEEK-LDADMREMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
16795]
gi|164602099|gb|EDQ95564.1| peptide chain release factor 1 [Clostridium bartlettii DSM 16795]
Length = 354
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 245/350 (70%), Gaps = 6/350 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ +K+L+ K++D EV+++ +QK + A+L+ +V YR++K+ ++E
Sbjct: 1 MLNKLQVLEDKYKELTEKISDIEVINDQKTWQKYMKEHADLEPIVMKYREYKEVVDNIKE 60
Query: 114 SRALAKENGNDEEM--AEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
S+ + +E ++E A+M E+ L + + +E++LK+LLLP DP D +N+++E+R G
Sbjct: 61 SKEILEEESDEELRELAKM---ELSDLESRVEPIEDELKILLLPKDPNDEKNVIVEIRGG 117
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
AGGDEA ++AGDL RMY +Y+E+ WK L+S+S+ GG+K V IKG YS+LKYE
Sbjct: 118 AGGDEAALFAGDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMIKGKGAYSRLKYE 177
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SGVHRVQR+P TE+ GR+HTSTATVA++PE ++VE+ I+P D+ + R+ G GGQ VN
Sbjct: 178 SGVHRVQRIPSTESGGRIHTSTATVAVLPEVEDVEIEINPNDLRIDVFRASGNGGQCVNT 237
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
++A+ + H PTG + C +E++QL+NK +A+++L+A+LY+ + EQ + I +R SQVG
Sbjct: 238 TDSAVRITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQHDDIAAERRSQVG 297
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
TG R+E+IRTYN+ RV+DHR+ + ++L SFLDG++D + + +Q
Sbjct: 298 TGDRSERIRTYNFPQGRVSDHRINLTLYKLESFLDGDLDEMIDALITEDQ 347
>gi|417937652|ref|ZP_12580952.1| peptide chain release factor 1 [Streptococcus infantis SK970]
gi|343391916|gb|EGV04489.1| peptide chain release factor 1 [Streptococcus infantis SK970]
Length = 359
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIID 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|423388374|ref|ZP_17365600.1| peptide chain release factor 1 [Bacillus cereus BAG1X1-3]
gi|423416760|ref|ZP_17393849.1| peptide chain release factor 1 [Bacillus cereus BAG3X2-1]
gi|401109322|gb|EJQ17247.1| peptide chain release factor 1 [Bacillus cereus BAG3X2-1]
gi|401643562|gb|EJS61259.1| peptide chain release factor 1 [Bacillus cereus BAG1X1-3]
Length = 355
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L + L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDAEMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3]
gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3]
Length = 358
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 4 VLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M +M+ E+ L + EL E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDADMRDMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEISIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|363898293|ref|ZP_09324827.1| peptide chain release factor 1 [Oribacterium sp. ACB7]
gi|361956029|gb|EHL09348.1| peptide chain release factor 1 [Oribacterium sp. ACB7]
Length = 358
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 238/358 (66%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ LE K ++++ L PEVVS+ ++Y+KL + L+ V Y F+ E+ E+
Sbjct: 1 MFENLEEVKKHYEEIMENLTIPEVVSDINQYKKLILEQSNLEPVYKAYIAFRKAEES-EK 59
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+N D+++ EM E+ + + L +++++LLLP D D +NI++E+R GAG
Sbjct: 60 DALFILDNEKDKDLIEMAKEELSTAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG L RMY Y+E+ WK L+S +E GG K VV + G YS+LKYESG
Sbjct: 120 GEEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVNGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPE ++VEV I+P D+++ RS GAGGQ++NK
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEVEDVEVEINPADVKMEVFRSSGAGGQHINKTS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ C EER+Q+QN+ +A++LLRA+LYEI++ +QQ++ ++ SQ+GTG
Sbjct: 240 SAVRLIHVPTGMVAECQEERSQVQNREKAMRLLRARLYEIELEKQQKENAEEKRSQLGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+ RVTDHR+K+ + + + L G++D + +Q E L L E+
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYNIDAVLGGDLDLVIDPLITEDQAEKLARLEEN 357
>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica LVS]
gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica OSU18]
gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica 257]
gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica URFT1]
gi|421751108|ref|ZP_16188166.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis AS_713]
gi|421752963|ref|ZP_16189972.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 831]
gi|421756695|ref|ZP_16193597.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700103]
gi|421758565|ref|ZP_16195410.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70102010]
gi|422939253|ref|YP_007012400.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC200]
gi|423051366|ref|YP_007009800.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica F92]
gi|424673831|ref|ZP_18110762.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70001275]
gi|119361542|sp|Q2A1Q0.1|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361543|sp|Q0BKE8.1|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223558|sp|A7NE96.1|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223560|sp|A4IWC1.1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica LVS]
gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica OSU18]
gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica 257]
gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407294404|gb|AFT93310.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC200]
gi|409088776|gb|EKM88835.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 831]
gi|409089094|gb|EKM89148.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis AS_713]
gi|409092122|gb|EKM92102.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70102010]
gi|409093356|gb|EKM93303.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 80700103]
gi|417435606|gb|EKT90496.1| peptide chain release factor 1 [Francisella tularensis subsp.
tularensis 70001275]
gi|421952088|gb|AFX71337.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica F92]
Length = 361
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 250/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++ LLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|386586102|ref|YP_006082504.1| peptide chain release factor 1 [Streptococcus suis D12]
gi|353738248|gb|AER19256.1| peptide chain release factor 1 [Streptococcus suis D12]
Length = 359
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 225/336 (66%), Gaps = 1/336 (0%)
Query: 73 ADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIA 132
+DP+VVS+ + +L++ A + V+ YR++K + + ++ + KE+ D ++ EM
Sbjct: 22 SDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNIIDAEEMIKESSGDADLEEMAK 81
Query: 133 SEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYS 192
E+K + EEKLK+LLLP DP D +NI+LE+R AGGDEA ++AGDL+ MYQKY+
Sbjct: 82 EELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYA 141
Query: 193 EQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTS 252
E W+ ++ +S GG K VV + G VYSKLKYESG HRVQRVP TE+QGRVHTS
Sbjct: 142 EGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTS 201
Query: 253 TATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEE 312
TATV IMPE +EVE IDPKD+ + + GAGGQNVNKV TA+ + H PT I++ EE
Sbjct: 202 TATVLIMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEE 261
Query: 313 RTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDH 372
RTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+E+IRTYN+ NRVTDH
Sbjct: 262 RTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRSERIRTYNFPQNRVTDH 321
Query: 373 RLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+ + + L + L G +D V + +Q + LEEL
Sbjct: 322 RIGLTLQKLDTILSGKMDEVVDALVLYDQTQKLEEL 357
>gi|335046352|ref|ZP_08539375.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 108
str. F0425]
gi|333760138|gb|EGL37695.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 108
str. F0425]
Length = 369
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 239/361 (66%), Gaps = 2/361 (0%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
E + LE K ++++ L PEVVS+ ++Y+KL + L+ + Y F+ E+
Sbjct: 9 EDKMFENLEEVKKHYEEIMENLTIPEVVSDINQYKKLILEQSNLEPIYKAYIAFRKAEES 68
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
E+ +N D+++ EM E+ + + L +++++LLLP D D +NI++E+R
Sbjct: 69 -EKDALFILDNEKDKDLIEMAKEELSTAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRG 127
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGG+EA ++AG L RMY Y+E+ WK L+S +E GG K VV + G YS+LKY
Sbjct: 128 GAGGEEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVNGQGAYSRLKY 187
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP+TE+ GR+HTSTATVA+MPE ++VEV I+P D+++ RS GAGGQ++N
Sbjct: 188 ESGVHRVQRVPETESGGRIHTSTATVAVMPEVEDVEVEINPADVKMEVFRSSGAGGQHIN 247
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K +A+ L H PTG+ C EER+Q+QN+ +A++LLRA+LYEI++ +QQ++ ++ SQ+
Sbjct: 248 KTSSAVRLIHVPTGMVAECQEERSQVQNREKAMRLLRARLYEIELEKQQKENAEEKRSQL 307
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
GTG R+EKIRTYN+ RVTDHR+K+ + + + L G++D + +Q E L L E
Sbjct: 308 GTGDRSEKIRTYNFPQGRVTDHRIKLTLYNIDAVLGGDLDLVIDPLITEDQAEKLARLEE 367
Query: 410 S 410
+
Sbjct: 368 N 368
>gi|387891957|ref|YP_006322254.1| peptide chain release factor 1 [Pseudomonas fluorescens A506]
gi|387160126|gb|AFJ55325.1| peptide chain release factor 1 [Pseudomonas fluorescens A506]
Length = 360
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVATYKNLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ ++L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKDKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + +
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGD 360
>gi|418962626|ref|ZP_13514480.1| peptide chain release factor 1 [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345161|gb|EID23294.1| peptide chain release factor 1 [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 359
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 235/352 (66%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A + V+TYR +K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYRDYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM EIK E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDASGDADLEEMAKQEIKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
gi|153796765|gb|EDN79185.1| peptide chain release factor 1 [Ruminococcus gnavus ATCC 29149]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ +L +P V ++P ++KL + ++L +V Y ++K C++ +E+
Sbjct: 1 MFDKLEDLLIRYEEVMGELQEPGVANDPERFRKLMKEQSDLAPIVEAYNEYKQCKQNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E +DEEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLMMLEEE-SDEEMRELAKEELNESKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y+E W+ +IS +E GGFK V I G YS++KYESG
Sbjct: 120 GDEAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMITGQGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA++V+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEDVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +L + L+G++D + S A +Q L + E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEVIDSLIAADQSAKLANMNE 356
>gi|20139347|sp|Q9AG29.1|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae]
Length = 359
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 230/355 (64%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L L+DP VVS+ + +L++ A E V+ YR++K + + +
Sbjct: 3 IYDQLQPVEDRYEELGELLSDPYVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K+ D E+ EM E+K E EE+LK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ SS GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE ID KD+ + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRADIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PTGI++ EERTQ +N+ +A++++RA++ + + Q++ +R S VGTG
Sbjct: 243 TAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LE L
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEAL 357
>gi|336431245|ref|ZP_08611099.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336020167|gb|EGN49884.1| peptide chain release factor 1 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ +L +P V ++P ++KL + ++L +V Y ++K C++ +E+
Sbjct: 1 MFDKLEDLLIRYEEVMGELQEPGVANDPERFRKLMKEQSDLAPIVEAYNEYKQCKQNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E +DEEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLMMLEEE-SDEEMRELAKEELNESKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y+E W+ +IS +E GGFK V I G YS++KYESG
Sbjct: 120 GDEAALFAAEVYRMYVHYAESRRWRTEMISLNENGIGGFKECVFMITGQGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA++V+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEDVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLYE+++ +QQ R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQSAEAEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +L + L+G++D + S A +Q L + E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDTILNGDLDEVIDSLIAADQSAKLANMNE 356
>gi|334143701|ref|YP_004536857.1| peptide chain release factor 1 [Thioalkalimicrobium cyclicum ALM1]
gi|333964612|gb|AEG31378.1| Peptide chain release factor 1 [Thioalkalimicrobium cyclicum ALM1]
Length = 362
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 237/354 (66%), Gaps = 4/354 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL++ + +++ V L+DP+VV+N +E++ L++ A+L+ VV++Y+ + E L+E+R
Sbjct: 8 KLQALVERLEEVGVLLSDPQVVNNQTEFRNLSKEHAQLEPVVTSYQAYLHAESDLQEARD 67
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ D E+ EM E +L +L LE L+ +LLP DP D NI LE+RAG GGDE
Sbjct: 68 MIA--SGDRELKEMAQEEYPALEQQLETLEIALQKMLLPRDPNDDANIFLEIRAGTGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I+AGDL +MY +Y+E W+ +I++S+ E GG+K ++ I G+ YSKLK+ESG HR
Sbjct: 126 AAIFAGDLFKMYARYAETQRWQIEIINTSDGEHGGYKEIIARIIGDGAYSKLKFESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP TE QGRVHTS AT+AIMPEA +VE V ++P D+++ T R+ GAGGQ+VNK ++A
Sbjct: 186 VQRVPATETQGRVHTSAATIAIMPEAADVEQVELNPADLKVDTFRASGAGGQHVNKTDSA 245
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
I + H PTG + C +ER+Q +N++RA+ LL A++ + K + ++I R S VG+G R
Sbjct: 246 IRITHLPTGTIVECQDERSQHKNRARAMSLLAARIMDAKRQAHNQEIAQTRKSLVGSGDR 305
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+E+IRTYNY RVTDHR+ + ++L ++G + + Q E L EL+
Sbjct: 306 SERIRTYNYPQGRVTDHRINLTLYKLDDVMNGGLAQVIDPLIHEYQAEQLAELS 359
>gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
gi|61214582|sp|Q5WB55.1|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ +L+DP V+SN ++ ++ ++ A+++E V TYR++K +QL +
Sbjct: 1 MLERLQAVEDRYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E +D+ M +M+ E+ LS ELEE+LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKAMLEEKLDDD-MYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL +MY +Y+E WK +I + E GG+K ++ + G+ YSKLKYE+G
Sbjct: 120 GDEAQLFAADLYKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+ GR+HTSTATVA++PEA+EVE+ I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPQTESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PT + C +E++Q++NK +A+++LRA++++ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARIFDKVQQEAQAEYAESRKLAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ +RVTDHR+ + + L L G +D + + +Q E +++ E
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLQKLEQVLQGKLDEIIDALVVADQSEAMKKAEE 356
>gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1
BON]
gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella
australiensis 50-1 BON]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/356 (44%), Positives = 248/356 (69%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+S + ++ LSVK++DPEV+S ++KL + ++L+ +V+ YR++K+ +Q ++
Sbjct: 1 MLDKLDSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A+ KE G D E+ E+ E+ L +LEE+LK LLLP DP D RN+++E+RAGAG
Sbjct: 61 VLAMIKETG-DAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY Y+E WK ++ S+ + GG K +V ++G YS+LKYESG
Sbjct: 120 GEEAALFAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GR+HTSTATVA++PEA+EVEV I+P D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPVTEAGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVYRSTGHGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++L+++L I EQ ++ R SQVGTG
Sbjct: 240 SAVRITHIPTGMVVTCQDEKSQLKNKDKAMRVLKSRLLAIAQAEQDAQLAQTRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L +FL+G++D + + +Q E L + A
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALITADQAERLSQAA 355
>gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 361
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 247/356 (69%), Gaps = 6/356 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L + V+S+ ++++ L++ + L+ +V + FK+ + LE+ A
Sbjct: 8 KLQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKEA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
+ N D E+ EM E+KS + + LE++L++LLLP DP D NI LE+RAG GGD
Sbjct: 65 AYEMLNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGD 124
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA I++GDL +MY KY+EQ WK ++S+SE E GG+K ++ I G+ VYS+LK+ESG H
Sbjct: 125 EASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAH 184
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK ++
Sbjct: 185 RVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDS 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R + VG+G
Sbjct: 245 AIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVGSGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 305 RSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATMSD 360
>gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
gi|404491120|ref|YP_006715226.1| peptide chain release factor 1 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423684246|ref|ZP_17659085.1| peptide chain release factor 1 [Bacillus licheniformis WX-02]
gi|81608865|sp|Q65DV1.1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52350129|gb|AAU42763.1| peptide chain release factor 1 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
gi|383441020|gb|EID48795.1| peptide chain release factor 1 [Bacillus licheniformis WX-02]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 243/358 (67%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S ++ L+ L+DPEVV++P + ++ ++ ++L E V YR+++ +QL +
Sbjct: 1 MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D +M EM+ EI L E+ L ++LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDSDMREMVKEEISELQEEIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I GN YS+LKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQNRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ NRVTDHR+ + + L L+G +D + + +Q L++ AES
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQASKLQQ-AES 356
>gi|387813305|ref|YP_005428787.1| peptide chain release factor RF-1 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338317|emb|CCG94364.1| peptide chain release factor RF-1 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 363
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 241/359 (67%), Gaps = 4/359 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE + +++++ L+D V++N +++ L++ AE++ VV ++ ++ + +
Sbjct: 3 PSIQSRLEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLEDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ + LAK+ D +M EM E+ S EL+E+L+ L+LP DP D +N+ LE+RAG
Sbjct: 63 DAATELAKDG--DADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA I+AGDL RMY +Y+E+ W+ ++S +E E GGFK ++ + G+ VY LK+E
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TE+QGR+HTS TVA+MPEADE E V I+ D+ + T RS GAGGQ+VN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H PTGI + C EER+Q +N+++AL LL ++L ++ +QQ+ + R S V
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQKSVAETRKSLV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G+G R+E+IRTYN+ RVTDHR+ + ++L + G++D V Q ELL ++A
Sbjct: 301 GSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGDLDAVVVPLQQEHQAELLADMA 359
>gi|402574907|ref|YP_006624250.1| peptide chain release factor 1 (bRF-1) [Desulfosporosinus meridiei
DSM 13257]
gi|402256104|gb|AFQ46379.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfosporosinus
meridiei DSM 13257]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 248/352 (70%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + + +L+ L+DPE++SN SE+QK A++ A + +V+ +R++++ +++L+E
Sbjct: 1 MLEKLYEIERKYDELTELLSDPEIISNQSEWQKYAKAQAGMTNLVTVFREYQEVKRELDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +E D EM EM E ++L + ELEE++++LLLP DPLD +N+++E+RAGAG
Sbjct: 61 TETLLREK-LDPEMQEMAEQEKENLLLKSEELEEQIRILLLPKDPLDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++S S ++ GG+K ++ I+G+ YSKLK+ESG
Sbjct: 120 GDEASLFAGDLHRMYTRYAEGQGWKVEVLSVSYSDAGGYKEIIFLIEGHGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA+EVEV I+P D+ + S G GGQ VN +
Sbjct: 180 VHRVQRIPATESSGRIHTSTATVAVLPEAEEVEVSINPNDLRIDVYCSSGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI C +E++QL+NK +AL++LRA++ E E + ++R +QVGTG
Sbjct: 240 SAVRVTHIPTGIIASCQDEKSQLKNKEKALRVLRARILEKAQEEAMGEQASERKNQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRT+N+ RVTDHR+ + L + L G++ +++ + +Q E L
Sbjct: 300 DRSERIRTFNFPQGRVTDHRINLTLHRLDTILTGDLGEIIEALNSSDQAERL 351
>gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
Length = 360
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ VV+TY ++ LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPVVTTYGQWLKTHADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ ++LI LE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKDKLIALEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|423376875|ref|ZP_17354159.1| peptide chain release factor 1 [Bacillus cereus BAG1O-2]
gi|423439972|ref|ZP_17416878.1| peptide chain release factor 1 [Bacillus cereus BAG4X2-1]
gi|423449868|ref|ZP_17426747.1| peptide chain release factor 1 [Bacillus cereus BAG5O-1]
gi|423463043|ref|ZP_17439811.1| peptide chain release factor 1 [Bacillus cereus BAG6O-1]
gi|423532399|ref|ZP_17508817.1| peptide chain release factor 1 [Bacillus cereus HuB2-9]
gi|423542333|ref|ZP_17518723.1| peptide chain release factor 1 [Bacillus cereus HuB4-10]
gi|423548563|ref|ZP_17524921.1| peptide chain release factor 1 [Bacillus cereus HuB5-5]
gi|423618969|ref|ZP_17594802.1| peptide chain release factor 1 [Bacillus cereus VD115]
gi|423621630|ref|ZP_17597408.1| peptide chain release factor 1 [Bacillus cereus VD148]
gi|401127557|gb|EJQ35276.1| peptide chain release factor 1 [Bacillus cereus BAG5O-1]
gi|401168780|gb|EJQ76035.1| peptide chain release factor 1 [Bacillus cereus HuB4-10]
gi|401174936|gb|EJQ82140.1| peptide chain release factor 1 [Bacillus cereus HuB5-5]
gi|401252445|gb|EJR58706.1| peptide chain release factor 1 [Bacillus cereus VD115]
gi|401262928|gb|EJR69062.1| peptide chain release factor 1 [Bacillus cereus VD148]
gi|401639969|gb|EJS57702.1| peptide chain release factor 1 [Bacillus cereus BAG1O-2]
gi|402421135|gb|EJV53400.1| peptide chain release factor 1 [Bacillus cereus BAG4X2-1]
gi|402422374|gb|EJV54612.1| peptide chain release factor 1 [Bacillus cereus BAG6O-1]
gi|402464968|gb|EJV96655.1| peptide chain release factor 1 [Bacillus cereus HuB2-9]
Length = 355
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M EM+ E+ L + L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDADMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEITIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|386288624|ref|ZP_10065764.1| peptide chain release factor 1 [gamma proteobacterium BDW918]
gi|385278179|gb|EIF42151.1| peptide chain release factor 1 [gamma proteobacterium BDW918]
Length = 360
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L++KL++ ++++ L+DPE++ N ++ L+Q AE++ VV +Y ++ + L E
Sbjct: 5 LVSKLDNLLDRYEEIGALLSDPEIIGNQDRFRGLSQEYAEIESVVQSYGHYRQVAEDLAE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ E+ D +M EM E+K+ +L LE +L+ LLLP DP D+ N+ LE+RAG G
Sbjct: 65 ATAMLSED--DADMREMAEEEVKAAKAKLETLEVELQTLLLPKDPNDSHNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ W+ ++S + E GG+K ++ + G VY LK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAERKGWRVEVLSERQGEHGGYKEIISRVAGQEVYGHLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA+M E +E E++I+ D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVMAEPEEADEILINKGDLRIDTFRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTGI + C +ER+Q +NK+RA+ LL AK+ + + + T+R + VG+
Sbjct: 243 DSAVRIVHIPTGIVVECQDERSQHKNKARAMSLLTAKVNDAASSKNLAEQATERRNLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + ++L F+ G++D+ + Q +LL LAE
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRINLTLYKLDEFVQGDVDHIISPLRQEYQADLLAALAE 360
>gi|386760354|ref|YP_006233571.1| peptide chain release factor 1 [Bacillus sp. JS]
gi|384933637|gb|AFI30315.1| peptide chain release factor 1 [Bacillus sp. JS]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 242/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I G+ YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEIMEANVTGTGGYKEIIFMITGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQ 353
>gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
gi|384203174|ref|YP_005588913.1| peptide chain release factor 1 [Bordetella pertussis CS]
gi|408416813|ref|YP_006627520.1| peptide chain release factor 1 [Bordetella pertussis 18323]
gi|410418180|ref|YP_006898629.1| peptide chain release factor 1 [Bordetella bronchiseptica MO149]
gi|412340322|ref|YP_006969077.1| peptide chain release factor 1 [Bordetella bronchiseptica 253]
gi|427812637|ref|ZP_18979701.1| peptide chain release factor 1 [Bordetella bronchiseptica 1289]
gi|427817662|ref|ZP_18984725.1| peptide chain release factor 1 [Bordetella bronchiseptica D445]
gi|427823817|ref|ZP_18990879.1| peptide chain release factor 1 [Bordetella bronchiseptica Bbr77]
gi|46576754|sp|Q7W023.1|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|46576762|sp|Q7WQE9.1|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS]
gi|401778983|emb|CCJ64453.1| peptide chain release factor 1 [Bordetella pertussis 18323]
gi|408445475|emb|CCJ57125.1| peptide chain release factor 1 [Bordetella bronchiseptica MO149]
gi|408770156|emb|CCJ54946.1| peptide chain release factor 1 [Bordetella bronchiseptica 253]
gi|410563637|emb|CCN21172.1| peptide chain release factor 1 [Bordetella bronchiseptica 1289]
gi|410568662|emb|CCN16714.1| peptide chain release factor 1 [Bordetella bronchiseptica D445]
gi|410589082|emb|CCN04147.1| peptide chain release factor 1 [Bordetella bronchiseptica Bbr77]
Length = 360
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 239/362 (66%), Gaps = 6/362 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE A ++ LA+PE ++ ++KL++ AEL+ VV + F E +
Sbjct: 3 PSMRSRLEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADV 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
A A+E +D +M M EIK+ + E+E L++LLLP DP D R++ LE+RAG
Sbjct: 63 ----ATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ +++GDL+RMY +Y+E W+ ++S SE+E GG+K V+ I G+ Y +LK+E
Sbjct: 119 TGGDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TEAQGR+HTS TVA+MPEAD + ++VI+P D+ + T R+ GAGGQ++N
Sbjct: 179 SGAHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTG+ + C ++R+Q +NK +A+Q+L A+L + ++RE+Q K +R S +
Sbjct: 239 KTDSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY RVTDHR+ + ++L ++G++D + A Q E L L
Sbjct: 299 GSGDRSERIRTYNYPQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQAEQLAALGH 358
Query: 410 SV 411
+
Sbjct: 359 DL 360
>gi|383753168|ref|YP_005432071.1| putative peptide chain release factor 1 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381365220|dbj|BAL82048.1| putative peptide chain release factor 1 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 355
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 239/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + +L ++DP+V+++ S +QK ++ A L +V +R++KD K +EE
Sbjct: 1 MLDKLQAVEDKFLELESLISDPDVIADMSRWQKYSKEHASLAPIVEKFREYKDVTKGIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E+ D+EM + + E+ L + L+ +L +LLLP DP D +N+++E+R G G
Sbjct: 61 AKAMFEES-LDDEMRKFVEEELAELKAQKEVLDAELPILLLPKDPNDDKNVIVEIRGGVG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y E+ WK +I S E GG+K + + G YSKLKYESG
Sbjct: 120 GEEAALFAGDLFRMYGRYVEKQGWKMEIIDGSPTELGGYKEISFMVTGFGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTS TVA++PEA++V+V IDPKD+ + + GAGGQ+VN+ E
Sbjct: 180 THRVQRVPATESGGRIHTSAVTVAVLPEAEDVDVDIDPKDLHIDLYCASGAGGQHVNRTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTGI + C +ER+QL+NK +A+++LRA+L + +EQ I R SQVG+G
Sbjct: 240 SAIRITHIPTGIVVQCQDERSQLKNKDKAMKVLRARLLDKAQQEQMASISADRRSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + + + L G++D + + +Q E L+++
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLHRIDAVLAGDLDEILNALITADQAERLKQV 354
>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
gi|119361504|sp|Q0VS77.1|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
Length = 361
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KL+ A +++L+ L+DP+V+SN ++++ L++ AE+D VV YR+++ + +
Sbjct: 5 LQGKLDKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVE--DH 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A A ++ +D +M EM A E + + L +L+ L+LP DP D N+ LEVRAG G
Sbjct: 63 GAAKAMQDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY KY++Q WK ++S+SE E GG+K V+ + G+ VYS++K+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVAIM EA+++ ++ I +D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C +ER+Q +NK+RA+ LL AKLY+ + + +R S VG+
Sbjct: 243 DSAVRITHLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L ++G++D + + A Q + L L E
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYRLNEIVEGDLDEILGALLAEYQADQLAALGE 360
>gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98]
gi|189039958|sp|A7GV79.1|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98]
Length = 355
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP V+++ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L + EL ++LK+LL+P DP D +N+++E+R AG
Sbjct: 61 AKAML-EDKLDAEMREMVKEEVSDLEVQEKELSDRLKILLVPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G Y+KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAKKME 352
>gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp.
ART55/1]
Length = 358
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 245/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE ++ +L DP+VVS+ ++++KL + ++L +V Y ++KD + +E+
Sbjct: 1 MFDRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S + +E + EE+ EM E+ L +E++LK+LLLP DP D++N+++E+RAGAG
Sbjct: 61 SLEILEEESD-EELREMAKEEMNEAKANLETIEQELKILLLPKDPNDSKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMYQKY +Q WK L+S +E GGFK V I G+ YSK+KYESG
Sbjct: 120 GDEAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P+TE+ GR+HTST TVA+MPEA+EV+V I+ DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRIPKTESGGRIHTSTITVAVMPEAEEVDVEINENDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK++A LLR+KLY++++++Q + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHDAEAADRRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ + RVTDHR+K+ ++L ++G+++ + S A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQTAKLAQVNE 356
>gi|406979948|gb|EKE01634.1| hypothetical protein ACD_21C00086G0001 [uncultured bacterium]
Length = 361
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 244/359 (67%), Gaps = 5/359 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I+KL A +++S LA PE++++ + Y++L++ A L+ +V+ +++ D ++++ +
Sbjct: 5 IISKLNLLATRHQEISDLLASPEIINDQNRYRELSKEYAHLEPIVTALKEYNDNQQKIAD 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + +E D ++ + E+ SL+NE +E KL LLLP DP D RN+ LE+R GAG
Sbjct: 65 AETILQEE-QDADLKALAQEELVSLANEHQAIEAKLHTLLLPQDPNDERNVFLEIRGGAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+ GDL RMY Y E W+ LI+SS+ E GG+K +++ I G YS+LK+ESG
Sbjct: 124 GDEAAIFVGDLFRMYSHYVEDAGWRIELINSSQGEHGGYKEIIVRIIGKGAYSRLKFESG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TEAQGR+HTST TVA++ EADE+ ++ I+P D++ T RS GAGGQ+VN
Sbjct: 184 THRVQRVPETEAQGRIHTSTCTVAVIAEADEIDDITINPADLKTDTYRSSGAGGQHVNVT 243
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIR-TQRLSQVG 351
++A+ + H PTG+ + C +ER+Q +N++RA+ LL+AKL + RE+QEK + R S VG
Sbjct: 244 DSAVRITHLPTGVVVECQDERSQHKNRARAMSLLKAKLLAAE-REKQEKEQAATRRSMVG 302
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
TG R+E+IRTYN+ R+TDHR+ + ++L ++G++ ++ Q +LL ++ E
Sbjct: 303 TGDRSERIRTYNFPQGRLTDHRINLTLYQLDKIMEGDLAPVIEPLIREHQADLLAQIGE 361
>gi|375364141|ref|YP_005132180.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384267236|ref|YP_005422943.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385266610|ref|ZP_10044697.1| peptide chain release factor 1 [Bacillus sp. 5B6]
gi|387900350|ref|YP_006330646.1| peptide chain release factor RF-1 [Bacillus amyloliquefaciens Y2]
gi|394991247|ref|ZP_10384054.1| peptide chain release factor 1 [Bacillus sp. 916]
gi|421729894|ref|ZP_16169023.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429506994|ref|YP_007188178.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451345142|ref|YP_007443773.1| peptide chain release factor 1 [Bacillus amyloliquefaciens IT-45]
gi|452857325|ref|YP_007499008.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|371570135|emb|CCF06985.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380500589|emb|CCG51627.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385151106|gb|EIF15043.1| peptide chain release factor 1 [Bacillus sp. 5B6]
gi|387174460|gb|AFJ63921.1| peptide chain release factor RF-1 [Bacillus amyloliquefaciens Y2]
gi|393808019|gb|EJD69331.1| peptide chain release factor 1 [Bacillus sp. 916]
gi|407075860|gb|EKE48844.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429488584|gb|AFZ92508.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449848900|gb|AGF25892.1| peptide chain release factor 1 [Bacillus amyloliquefaciens IT-45]
gi|452081585|emb|CCP23355.1| peptide chain release factor 1 [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 356
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D +M EM+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDADMREMVKEEISELQGETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I G YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQ 353
>gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
gi|407707802|ref|YP_006831387.1| chromosome segregation ATPase [Bacillus thuringiensis MC28]
gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
gi|407385487|gb|AFU15988.1| Peptide chain release factor 1 [Bacillus thuringiensis MC28]
Length = 358
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 4 VLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M EM+ E+ L + L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDADMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEITIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803]
gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803]
Length = 358
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L + EL +LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDAEMREMVKEEVSELEGQDKELSARLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|402563073|ref|YP_006605797.1| peptide chain release factor 1 [Bacillus thuringiensis HD-771]
gi|410677747|ref|YP_006930118.1| peptide chain release factor 1 [Bacillus thuringiensis Bt407]
gi|423362828|ref|ZP_17340328.1| peptide chain release factor 1 [Bacillus cereus VD022]
gi|423386818|ref|ZP_17364073.1| peptide chain release factor 1 [Bacillus cereus BAG1X1-2]
gi|423526850|ref|ZP_17503295.1| peptide chain release factor 1 [Bacillus cereus HuB1-1]
gi|423565780|ref|ZP_17542055.1| peptide chain release factor 1 [Bacillus cereus MSX-A1]
gi|434378448|ref|YP_006613092.1| peptide chain release factor 1 [Bacillus thuringiensis HD-789]
gi|401077102|gb|EJP85447.1| peptide chain release factor 1 [Bacillus cereus VD022]
gi|401193462|gb|EJR00468.1| peptide chain release factor 1 [Bacillus cereus MSX-A1]
gi|401630670|gb|EJS48468.1| peptide chain release factor 1 [Bacillus cereus BAG1X1-2]
gi|401791725|gb|AFQ17764.1| peptide chain release factor 1 [Bacillus thuringiensis HD-771]
gi|401877005|gb|AFQ29172.1| peptide chain release factor 1 [Bacillus thuringiensis HD-789]
gi|402454722|gb|EJV86512.1| peptide chain release factor 1 [Bacillus cereus HuB1-1]
gi|409176876|gb|AFV21181.1| peptide chain release factor 1 [Bacillus thuringiensis Bt407]
Length = 355
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 242/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAMLEEK-LDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 352
>gi|340756651|ref|ZP_08693256.1| peptide chain release factor 1 [Fusobacterium varium ATCC 27725]
gi|251833914|gb|EES62477.1| peptide chain release factor 1 [Fusobacterium varium ATCC 27725]
Length = 358
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 250/361 (69%), Gaps = 9/361 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE K + +L+ L PEV+++P + + +S++++ +V Y+++K ++ E
Sbjct: 1 MFGKLEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSDITPIVEKYKEYK----RVIE 56
Query: 114 SRALAKEN---GNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
KEN D+EM EM+ E+K L + ELE++LKVLLLP D D +N+++E+R
Sbjct: 57 DFDFIKENLKTEKDQEMKEMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRG 116
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGGDEA ++AG+L RMY +Y+E+ WK +I E GG K VV I G YS+LK+
Sbjct: 117 GAGGDEAALFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVFSINGFGAYSRLKF 176
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNV 289
ESGVHRVQRVP+TE+ GRVHTSTATVA++PE ++V EV IDP+D+++ T RSGGAGGQ+V
Sbjct: 177 ESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHV 236
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N ++A+ + H PTGI + C +ER+QL+N+ +A++ L +KL+E++ +Q+ ++ ++R Q
Sbjct: 237 NMTDSAVRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQRSQVESERRLQ 296
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+EKIRTYN+ R+TDHR+K ++L +FLDG++D + + Q E+L ++
Sbjct: 297 VGTGDRSEKIRTYNFPQGRITDHRIKFTVYQLEAFLDGDLDEMIDALITFSQAEMLSSVS 356
Query: 409 E 409
E
Sbjct: 357 E 357
>gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
Length = 358
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 4 VLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L + L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDAEMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
Length = 362
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 236/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + KL++ L E V Y ++K + +++
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++A M E+ +LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEEMLRET-DDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY Y+E+ WK ++ SE E GGFK + + I G VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++V+V IDPKDI + RS GAGGQ+VNK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L++++Y+ +++Q +R + +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQNAYDKKRKNAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G +D +++ +Q E LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMSGELDEIIEALIVADQTEKLEQL 359
>gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
27755]
gi|346306711|ref|ZP_08848865.1| peptide chain release factor 1 [Dorea formicigenerans 4_6_53AFAA]
gi|166027103|gb|EDR45860.1| peptide chain release factor 1 [Dorea formicigenerans ATCC 27755]
gi|345908069|gb|EGX77737.1| peptide chain release factor 1 [Dorea formicigenerans 4_6_53AFAA]
Length = 376
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 236/357 (66%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++ +L +P+V S+P+ ++KL + +EL +V Y+++K C++ +EE
Sbjct: 21 MFDKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEYKACKQNIEE 80
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S L E +DE+M E+ E+ + ELE +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 81 SLELLNEE-SDEDMRELAKEELNESKARVEELEHELKILLLPKDPNDDKNVVVEIRAGAG 139
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y+E WK L+ E GG K V I G YS +KYESG
Sbjct: 140 GDEAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGAYSMMKYESG 199
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA++V+V ID KDI + R+ G GGQ VN +
Sbjct: 200 VHRVQRVPETESGGRIHTSTITVAVMPEAEDVDVHIDEKDIRIDVMRASGNGGQCVNTTD 259
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A LLRAKLY+++ ++Q + R SQ+GTG
Sbjct: 260 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHDAEAEARKSQIGTG 319
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+ + ++L ++G+I + +C A +Q + L + E
Sbjct: 320 DRSEKIRTYNFPQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQAKKLANMDE 376
>gi|421185629|ref|ZP_15643028.1| peptide chain release factor 1 [Oenococcus oeni AWRIB418]
gi|399968892|gb|EJO03323.1| peptide chain release factor 1 [Oenococcus oeni AWRIB418]
Length = 357
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 235/357 (65%), Gaps = 7/357 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ ++++ + +L+ LADP+V S+ + + A+ + E+ +V YR+++ ++ +
Sbjct: 4 IFAQIQNVVDRYDELNELLADPDVASDSGKCTRYAKELGEITPIVENYRRYQQLTNEIND 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L ND+EMA + E+ L E EL EKLKVL++P DP D +NI++E+R G
Sbjct: 64 DKELL----NDKEMASLAKKELSELEPEQSELSEKLKVLMIPKDPNDDKNIIMEIRGAVG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MY Y++ +W ++ + E GGFK V+ I G VYSKLK+ESG
Sbjct: 120 GDEANLFAGDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINISGENVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEV--VIDPKDIELTTARSGGAGGQNVNK 291
HRVQRVP TE QGRVHTSTATV +MPE ++++ +IDPKD+ RS GAGGQ++NK
Sbjct: 180 AHRVQRVPVTETQGRVHTSTATVGVMPEFEDIDTEGLIDPKDVREDVYRSSGAGGQHINK 239
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
+A+ L H PTGI++ E+R+Q QN+S+A Q+LR+++Y+ +E +E+ QR +++G
Sbjct: 240 TSSAVRLVHVPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQENREQYDQQRRTKIG 299
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+G R+E+IRTYN+ NRVTDHR+ +L ++G+++ + + +Q + LEE+
Sbjct: 300 SGDRSERIRTYNFPQNRVTDHRINFTLNKLDKVINGDLEEIIDALIIADQTKRLEEM 356
>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691540|sp|B2SFF6.1|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 361
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 250/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++ LLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATMSD 360
>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
holarctica FSC022]
Length = 361
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 250/357 (70%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L++ ++S+ ++++ L++ + L+ +V + FK+ + LE+ +A
Sbjct: 8 KLQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIV---KAFKEYTQALEDKQA 64
Query: 117 LAKE-NGNDEEMAEMIASEIKSLSNELIE-LEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ N D E+ EM E+K L+NE IE LE +L++ LLP DP D N+ LE+RAG GG
Sbjct: 65 AYEMLNEKDAELVEMAKEELK-LANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK +IS+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRIPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R S VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQADLLATMSD 360
>gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
gi|350267971|ref|YP_004879278.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|384177347|ref|YP_005558732.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|418031070|ref|ZP_12669555.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428281328|ref|YP_005563063.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto
BEST195]
gi|449096154|ref|YP_007428645.1| peptide chain release factor 1 [Bacillus subtilis XF-1]
gi|452912459|ref|ZP_21961087.1| peptide chain release factor 1 [Bacillus subtilis MB73/2]
gi|1172909|sp|P45872.1|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. 168]
gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. 168]
gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto
BEST195]
gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
gi|349596571|gb|AEP92758.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349600858|gb|AEP88646.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|351472129|gb|EHA32242.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|407962544|dbj|BAM55784.1| peptide chain release factor 1 [Bacillus subtilis BEST7613]
gi|407966557|dbj|BAM59796.1| peptide chain release factor 1 [Bacillus subtilis BEST7003]
gi|449030069|gb|AGE65308.1| peptide chain release factor 1 [Bacillus subtilis XF-1]
gi|452117487|gb|EME07881.1| peptide chain release factor 1 [Bacillus subtilis MB73/2]
Length = 356
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 242/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I G+ YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQ 353
>gi|409427036|ref|ZP_11261567.1| peptide chain release factor 1 [Pseudomonas sp. HYS]
Length = 360
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ +++L+ L D EV+S+ + ++ ++ AE++ V Y +++ + L
Sbjct: 5 LLNKLDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVAVAYAQWRKVQDDLAG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMAVEEVREAKEQLAVLENQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T R+ GAGGQ++NK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHINKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +I+ Q + ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDIQTSAAQNAMASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDVLAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri]
Length = 358
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 232/348 (66%), Gaps = 2/348 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
I +LE+ K W ++ +L PE+V++ + LA+ A+L+E V+ Y +K+ + E+
Sbjct: 6 IERLETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLNNINEA 65
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ L E D E+ E+ E+K+ +L +LKV+LLP DP D +N++ E+R AGG
Sbjct: 66 K-LILETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGG 124
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DE I+AGDL RMY KY+EQ WK LI ++E+E GGF T+ +KG+RVYSK+K+ESG
Sbjct: 125 DEGNIFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGA 184
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQR+P+TE++GRVHTSTATVA++PE +EV+ I D+++ T R+ GAGGQ+VN ++
Sbjct: 185 HRVQRIPKTESKGRVHTSTATVAVLPEIEEVDFEIKTADLKIDTYRASGAGGQHVNTTDS 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTG + + R+Q NK+ A+Q LR+KLYE + R+ E+ T R VGTG
Sbjct: 245 AVRITHLPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTLRKDAVGTGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQK 401
R+EKIRTYNY NRVTDHR+ + + L ++GN+D V + EQ+
Sbjct: 305 RSEKIRTYNYPQNRVTDHRINLTLQKLDQIMEGNLDEIVVALINEEQR 352
>gi|414158445|ref|ZP_11414739.1| peptide chain release factor 1 [Streptococcus sp. F0441]
gi|410870990|gb|EKS18947.1| peptide chain release factor 1 [Streptococcus sp. F0441]
Length = 359
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + K++G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKDSGGDADLEEMAKQELKDAKVEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862]
Length = 361
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K+++ + ++S ++DP+V+S+ + L++ L E V T++++KD +E
Sbjct: 4 IFEKVQAVVDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKDVVDGIEG 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + E D E+ EM E+K L E LEE++K+LLLP DP D +NI++E+ AG
Sbjct: 64 NEEMLNEGLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAG 123
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE ++A DL MYQ+Y+E+ W +I ++ E GG+K +V+ I GN VYSKLK+E+G
Sbjct: 124 GDEGALFAADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENG 183
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GRVHTSTATV +MPE ++V++ I+ KD+ + RS GAGGQ+VNK
Sbjct: 184 AHRVQRVPETESAGRVHTSTATVGVMPEYEDVDIEIEDKDLRVDVYRSSGAGGQHVNKTS 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + ++R+Q QN+++AL++L+A++Y+ + + + QR + VGTG
Sbjct: 244 SAVRMTHLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNEAEYAEQRKTAVGTG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ ++ +L ++G +++ + + +Q LEEL
Sbjct: 304 DRSERIRTYNYPQNRVTDHRIGLSLNKLDRIMNGELEDVIDALIIADQTAKLEEL 358
>gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6]
gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6]
Length = 359
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSETKRFMELSKEEASSRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
Length = 355
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 235/349 (67%), Gaps = 2/349 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE + DL KLADP VVS+P EY ++A+ A+ E+V R + D +E ++
Sbjct: 4 KLEKILSAYADLEKKLADPAVVSDPKEYARIAKEHADQAELVELSRSYIDALDDIEAAKE 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L +D E EM+ ++I +L ELE+++K+ L+P DP D ++ ++E+RAG GGDE
Sbjct: 64 LLS-GSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I+AGDL +MY++++E WK ++SSS +E GGFKT+ ++ G +VYS +K+ESGVHR
Sbjct: 123 AAIFAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE+QGR+ TSTATVA++PEAD++++ I+ +D+ + T + G GGQ VN +A+
Sbjct: 183 VQRVPKTESQGRIQTSTATVAVLPEADDIDIQINQEDLRIDTYCASGPGGQGVNTTYSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT + ++R+Q+QN+ +Q+LRA+LYE ++ QQ + RLSQ+G GAR+
Sbjct: 243 RITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQAEQGADRLSQIGHGARS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMNFELTSFLDGN-IDNAVQSCAAMEQKELL 404
EKIRTYN +RVTDHR+ N L G+ + + ++S AA E+ E L
Sbjct: 303 EKIRTYNQPQDRVTDHRIGFNGTYNGVLLGDTLPSVIESLAAAERAEKL 351
>gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597]
gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597]
Length = 359
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ + + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSSRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42]
gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42]
Length = 359
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 4 VLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D +M EM+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 64 AKAMLEEK-LDADMREMVKEEISELQGETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I G YSKLKYE+G
Sbjct: 123 GEEAALFAGNLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQSSKLQQ 356
>gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8]
gi|166223568|sp|A1U367.1|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter
aquaeolei VT8]
Length = 363
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 241/359 (67%), Gaps = 4/359 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE + +++++ L+D V++N +++ L++ AE++ VV ++ ++ + +
Sbjct: 3 PSIQSRLEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLEDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ + LAK+ D +M EM E+ S EL+E+L+ L+LP DP D +N+ LE+RAG
Sbjct: 63 DAATELAKDG--DADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA I+AGDL RMY +Y+E+ W+ ++S +E E GGFK ++ + G+ VY LK+E
Sbjct: 121 TGGDEAAIFAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TE+QGR+HTS TVA+MPEADE E V I+ D+ + T RS GAGGQ+VN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H PTGI + C EER+Q +N+++AL LL ++L ++ +QQ+ + R S V
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQKSMAETRKSLV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G+G R+E+IRTYN+ RVTDHR+ + ++L + G++D V Q ELL ++A
Sbjct: 301 GSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGDLDAVVVPLQQEHQAELLADMA 359
>gi|452973694|gb|EME73516.1| peptide chain release factor 1 [Bacillus sonorensis L12]
Length = 356
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 243/358 (67%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S ++ L+ L+DPEVV++P + ++ ++ ++L E V YR+++ +QL +
Sbjct: 1 MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLND 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ EI L E+ L ++LKVLL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEKL-DPEMRDMVKEEISELQEEIETLTDQLKVLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I GN YS+LKYE+G
Sbjct: 120 GEEAALFAGNLYRMYTRYAELQGWKTEVMEANTTGTGGYKEIIFMINGNGAYSRLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVEIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQNRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ NRVTDHR+ + + L L+G +D + + +Q L++ AES
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQASKLQQ-AES 356
>gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
Length = 362
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES +++L ++DPEV+++ +Y ++++ A+L EVV Y+ F + + ++
Sbjct: 4 VMAQLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIAN 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D ++ +M E +L E+ +LEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISHE-SDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMYQKY+E W+ ++I S E E GGFK V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q +R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +++ + + Q + LE++A+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359
>gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
Length = 362
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES +++L ++DPEV+++ +Y ++++ A+L EVV Y+ F + + ++
Sbjct: 4 VMAQLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIAN 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D ++ +M E +L E+ +LEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISHE-SDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMYQKY+E W+ ++I S E E GGFK V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q +R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +++ + + Q + LE++A+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359
>gi|423394476|ref|ZP_17371677.1| peptide chain release factor 1 [Bacillus cereus BAG2X1-1]
gi|423405348|ref|ZP_17382497.1| peptide chain release factor 1 [Bacillus cereus BAG2X1-3]
gi|401658163|gb|EJS75662.1| peptide chain release factor 1 [Bacillus cereus BAG2X1-1]
gi|401661250|gb|EJS78719.1| peptide chain release factor 1 [Bacillus cereus BAG2X1-3]
Length = 355
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDTREQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M +M+ E+ L + L E+LKVLL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDADMRDMVKEEVSELEGQEKTLSERLKVLLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEITIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|357053565|ref|ZP_09114657.1| peptide chain release factor 1 [Clostridium clostridioforme
2_1_49FAA]
gi|355385191|gb|EHG32243.1| peptide chain release factor 1 [Clostridium clostridioforme
2_1_49FAA]
Length = 357
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 240/357 (67%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ +++L + L DP+V + + +L + A+L +V Y+++K ++ +E+
Sbjct: 1 MFDKLDDMLIHYEELMLMLGDPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E + EEM EM E+ + +LE +LK+LLLP DP D +NI+LE+RAGAG
Sbjct: 61 SLALLEEEND-EEMREMAKEELSGARKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY Y++ WK ++S +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFAAELYRMYSNYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+EV+V ID D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY+I++ ++Q +R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQSSEAEERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +++ S ++G+I + + A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQAAKLAKMNE 356
>gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
Length = 366
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 243/358 (67%), Gaps = 11/358 (3%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE + ++ L+ L++P+V+++ ++ QK+++ A L+++V T+R ++ L E
Sbjct: 1 MIDKLEEVERRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGDLAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A +G D + + L + E E++LK+LLLP DP D ++++LE+RAGAG
Sbjct: 61 VEAWL--DGGDADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A ++++MY +Y+ + WK ++ S GG K V + + G V+S +KYESG
Sbjct: 119 GDEAGLFAEEVMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGR+HTST TV++MPEA++V+V I+P DIE+ RS G+GGQ+VN +
Sbjct: 179 VHRVQRVPATETQGRIHTSTITVSVMPEAEDVDVQINPADIEMQVMRSTGSGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS----Q 349
+A+ L HKP+GI + C +E++Q +N+++A+++LRAKLYEI +QE+IR++R S Q
Sbjct: 239 SAVRLIHKPSGIVVKCQQEKSQTKNRAQAMRMLRAKLYEI----EQERIRSERDSMRRGQ 294
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
VGTG R+EKIRTYN+ +R+TDHR+ + L + G ID+ + +C Q E L++
Sbjct: 295 VGTGDRSEKIRTYNFPQDRLTDHRISLTVHNLPGIMAGGIDDVITACRTHYQAEALKQ 352
>gi|350563206|ref|ZP_08932028.1| peptide chain release factor 1 [Thioalkalimicrobium aerophilum AL3]
gi|349779070|gb|EGZ33417.1| peptide chain release factor 1 [Thioalkalimicrobium aerophilum AL3]
Length = 362
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 236/354 (66%), Gaps = 4/354 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL++ + +++ L+DP+VV+N +E++ L++ A+L+ VVS+Y+ + E L+E+R
Sbjct: 8 KLQALVERLEEVGALLSDPQVVNNQTEFRNLSKEHAQLEPVVSSYKAYLSAEADLQEARD 67
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ D ++ EM E +L +L LE L+ +LLP DP D NI LE+RAG GGDE
Sbjct: 68 MIA--SGDRDLKEMAQEEYPALEQQLETLEIALQKMLLPRDPNDDANIFLEIRAGTGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I+AGDL +MY +Y+E W+ +I++S+ E GG+K ++ I G+ YSKLK+ESG HR
Sbjct: 126 AAIFAGDLFKMYARYAETQRWQIEIINTSDGEHGGYKEIIARIIGDGAYSKLKFESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP TE QGRVHTS ATVAIMPEA +VE V ++P D+++ T R+ GAGGQ+VNK ++A
Sbjct: 186 VQRVPATETQGRVHTSAATVAIMPEAADVEQVELNPADLKVDTFRASGAGGQHVNKTDSA 245
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
I + H PTG + C +ER+Q +N++RA+ LL A++ + K + ++I R S VG+G R
Sbjct: 246 IRITHIPTGTIVECQDERSQHKNRARAMSLLAARIMDAKRQAHNQEIAQTRKSLVGSGDR 305
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
+E+IRTYNY RVTDHR+ + ++L ++G + + Q E L EL+
Sbjct: 306 SERIRTYNYPQGRVTDHRINLTLYKLDDVMNGGLAQVIDPLNHEYQAEQLAELS 359
>gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
14600]
gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
14600]
Length = 357
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 231/348 (66%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ ++A+P++ S+ +++ +L + +EL +V T+R ++ ++ +E+
Sbjct: 1 MFDKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S L +DEEM ++ E+ ELE +LKVLLLP D D RN+++E+R GAG
Sbjct: 61 SLELLDAE-SDEEMRQLAKEELAEARASAEELENQLKVLLLPKDSNDDRNVIIEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY+ Y+E W C ++ E GG K + ++G YS LKYESG
Sbjct: 120 GDEAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTST TVA+MPEA EV+VVIDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPATESGGRIHTSTVTVAVMPEAQEVDVVIDPADIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK++A LLRAKLY +++ QQE+ +RL+Q+G+G
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASARRLAQIGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+ + ++L L+G++ + + A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRINLTLYKLDKILNGDLQELLDALMAADQ 347
>gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
12809]
gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
12809]
Length = 356
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 242/353 (68%), Gaps = 1/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ K + +L+ KL DPE++ + +QK A+ AEL VV Y ++ ++ ++E
Sbjct: 1 MFDKLDEVRKKYYELTDKLVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ ++ K +D+++ E+ E++ L ELE++LK LL DP D +NI LE+RAG G
Sbjct: 61 AHSIIK-TSDDKDLVELAEMELEEKKGVLDELEDELKKSLLTKDPYDDKNIFLEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MY KY+E N WK ++ +E GG+K VV +KG+ YSKLK+E+G
Sbjct: 120 GDEASLFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTS TVA++PEA++V+V I+ KD+ + R+ GAGGQ+VN +
Sbjct: 180 GHRVQRVPETESGGRIHTSACTVAVLPEAEDVDVHIEQKDLRIDVFRASGAGGQHVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +ER+Q++N+ +A++LL++K+ E +++++Q R QVG+G
Sbjct: 240 SAVRMTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQSAEAASRKLQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+K + L FL G +++ + + A +Q E L+E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIKESANLDRFLLGEMEDMIDATIAFDQAERLQE 352
>gi|403236587|ref|ZP_10915173.1| peptide chain release factor 1 [Bacillus sp. 10403023]
Length = 355
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 240/354 (67%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LE+ ++ L+ L+DP++VS+ ++ ++ ++ +++ E V YR++K+ ++QL +
Sbjct: 1 MFDRLEAVEARYEKLNELLSDPDIVSDTTKLREYSKEQSDIQETVEKYREYKEVKEQLTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM EM+ EI L +++ ELEE L VLLLP DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMREMVKEEINELEDQMEELEEILHVLLLPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +++E WK ++ ++ GG+K ++ I G +SKLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRFAEHQGWKTEVMEANTTGVGGYKEIIFMINGKGAFSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q +E+
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILTGKLDEVIDALIMEDQARKMEQ 353
>gi|399923811|ref|ZP_10781169.1| peptide chain release factor 1 [Peptoniphilus rhinitidis 1-13]
Length = 355
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 238/342 (69%), Gaps = 2/342 (0%)
Query: 67 DLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGNDEE 126
+L L+D ++++ YQ+ A AE++ +V+ YR++K + L E++ L KE +DE
Sbjct: 14 ELEKDLSDVNIINDSKLYQQKAIEHAEIEPIVAKYREYKKTLEVLNENKELIKEKLDDE- 72
Query: 127 MAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVR 186
+++ EI + ++ +LE LK+LL+P D D++N+M+E+RAGAGGDEA ++AG L R
Sbjct: 73 FKDLVREEINEGNKKVEDLENDLKILLIPKDKNDSKNVMVEIRAGAGGDEAALFAGVLYR 132
Query: 187 MYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQ 246
Y +Y+E+ +K ISS+E GGFK VV I G YS+LKYESGVHRVQRVP+TE+
Sbjct: 133 QYVRYAERCGFKVETISSNEIGIGGFKEVVFMIIGRGAYSRLKYESGVHRVQRVPETESG 192
Query: 247 GRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIR 306
GR+HTSTATVA++PEA++V++ IDP +I+ R+ G GGQ VN ++A+ L H PTGI
Sbjct: 193 GRIHTSTATVAVLPEAEDVDIEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHIPTGIV 252
Query: 307 IFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKD 366
I C +E++QL+NK +A++LLR+KLY++K++EQ EK +R SQ+G+G R+E+IRTYNY
Sbjct: 253 ISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQNEKESMERSSQIGSGDRSERIRTYNYPQ 312
Query: 367 NRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
RVTDHR+ + + + DG++D + + +Q + +E +
Sbjct: 313 GRVTDHRINFTSHRIDAINDGDLDEIIDALITYDQTQKIENI 354
>gi|423689826|ref|ZP_17664346.1| peptide chain release factor 1 [Pseudomonas fluorescens SS101]
gi|388002153|gb|EIK63482.1| peptide chain release factor 1 [Pseudomonas fluorescens SS101]
Length = 360
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYAEVEPIVATYKNLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + +
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGD 360
>gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
15176]
gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
15176]
Length = 359
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 235/354 (66%), Gaps = 2/354 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L + +++L+ +++ P+ + P Y ++ + EL +V YR++ ++Q E+
Sbjct: 6 QLHEVERRYEELAYRMSAPDAAAQPDVYARMMKDYKELTPLVEEYRRYTSLQQQQTETNE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L ++ D M+ E+ ++ L + EE L++LLLP D D +N++LE+RAGAGG+E
Sbjct: 66 LVQQE-TDPAFKAMVQQELCEIARNLAQSEENLRLLLLPKDADDEKNVILEIRAGAGGEE 124
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A L RMY Y+ + W C IS++E E GG K VV ++G VYS+LK+ESGVHR
Sbjct: 125 AALFAHSLWRMYTMYASKRGWSCQTISANETELGGVKEVVFSVEGADVYSRLKFESGVHR 184
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE QGR+HTST TVA+MPEA+EVE+ +DPKD+ + T RS GAGGQ++NK +AI
Sbjct: 185 VQRVPETETQGRIHTSTVTVAVMPEAEEVELELDPKDLRIDTFRSSGAGGQHINKTSSAI 244
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C ++R+Q +NK RAL +LR++L + K + E +R SQVGTG R+
Sbjct: 245 RVTHLPTGMVVECQDQRSQRENKERALTVLRSRLLQQKQQAYDEAYNEKRQSQVGTGDRS 304
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
EKIRTYN+ +RVTDHR+ + L LDG++D ++ +++E L++ +E
Sbjct: 305 EKIRTYNFPQDRVTDHRIGLTLRNLQGVLDGDLDRVLEPLILADREEKLKQHSE 358
>gi|374812548|ref|ZP_09716285.1| peptide chain release factor 1 [Treponema primitia ZAS-1]
Length = 361
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 240/360 (66%), Gaps = 3/360 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+LES + + +LS + DPE+V + +Y+ + ++LD + T R+ ++ QL +++
Sbjct: 4 RLESLLRRYDELSGLIQDPELVKDQKKYRDTMREYSQLDTIAGTQREIEEISAQLADTKT 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L ++ D +M EM E + L L + E++LK LL+P DPLD +NI++E+RAG GGDE
Sbjct: 64 LIQDE-KDPDMREMAKEESRELETHLKDAEDRLKFLLIPKDPLDEKNIIMEIRAGTGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY +++E WK ++SS+E E GGFK +V I GN VY L+YESGVHR
Sbjct: 123 AALFASDLYRMYSRFAETKGWKFEIMSSNETELGGFKEIVFSISGNNVYENLRYESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS TVA++PEADE E+ I +D+ + R+GG GGQ VN ++A+
Sbjct: 183 VQRVPATEASGRIHTSAVTVAVLPEADETEIDIRTEDLRIDVMRAGGPGGQCVNTTDSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H P+G+ + C +E++Q++NK++A+++LRA++YE++ + R +QVG+G R+
Sbjct: 243 RITHIPSGVVVQCQDEKSQIKNKAKAMRVLRARIYEMEEAKAAASRSEARKNQVGSGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESVGAPS 415
E+IRTYN+ NR+TDHR+ + ++L + G+++ + ++ELL+ A SV A S
Sbjct: 303 ERIRTYNFPQNRLTDHRINLTLYKLDLIMQGDVEELFDALKLSAREELLQTTA-SVTAAS 361
>gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
gi|419821407|ref|ZP_14345001.1| peptide chain release factor 1 [Bacillus atrophaeus C89]
gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
gi|388474380|gb|EIM11109.1| peptide chain release factor 1 [Bacillus atrophaeus C89]
Length = 356
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 244/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P++ ++ ++ +++ E V YR+++D +QL +
Sbjct: 1 MLDRLKSIEERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ EI L +E + ++LK+LL+P DP D +N+++E+R AG
Sbjct: 61 AKAML-EDKLDAEMREMVKEEISELQDETEAMTDQLKLLLVPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ +S GG+K +++ I G YSKLKYE+G
Sbjct: 120 GEEAALFAGNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFTSSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQTRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V + +Q L++ E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEFVDALIMEDQSSKLQKAEE 356
>gi|385260269|ref|ZP_10038417.1| peptide chain release factor 1 [Streptococcus sp. SK140]
gi|385191533|gb|EIF38946.1| peptide chain release factor 1 [Streptococcus sp. SK140]
Length = 359
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIID 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGLSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842]
gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
gi|384189418|ref|YP_005575314.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|452201834|ref|YP_007481915.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842]
gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|452107227|gb|AGG04167.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 358
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 242/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAMLEEKL-DAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 355
>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189039973|sp|B0TX37.1|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 361
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 246/357 (68%), Gaps = 8/357 (2%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL+S + +++S L + V+S+ ++++ L++ + L+ +V ++++ Q E +
Sbjct: 8 KLQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVMAFKEYT----QALEDKE 63
Query: 117 LAKE--NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
A E N D E+ EM E+KS + + LE++L++LLLP DP D NI LE+RAG GG
Sbjct: 64 AAYEMLNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGG 123
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DEA I++GDL +MY KY+EQ WK ++S+SE E GG+K ++ I G+ VYS+LK+ESG
Sbjct: 124 DEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGA 183
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVA+MPEADEVE + I+P DI++ T R+ GAGGQ+VNK +
Sbjct: 184 HRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTD 243
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +N++ A+ +L++KL + ++ +QQ++ R + VG+G
Sbjct: 244 SAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVGSG 303
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY RVTDHR+ + ++L ++G++D+ +Q Q +LL +++
Sbjct: 304 DRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQADLLATMSD 360
>gi|402777864|ref|YP_006631808.1| peptide chain release factor 1 [Bacillus subtilis QB928]
gi|430756502|ref|YP_007207781.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|402483043|gb|AFQ59552.1| Peptide chain release factor 1 [Bacillus subtilis QB928]
gi|430021022|gb|AGA21628.1| Peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 359
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 242/354 (68%), Gaps = 2/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + ++ L+ L+DPEVV++P + ++ ++ +++ E V YR+++D +QL +
Sbjct: 4 VLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ EI L E L E+LKVLL+P DP D +N+++E+R AG
Sbjct: 64 AKAMLEEK-LDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AG+L RMY +Y+E WK ++ ++ GG+K ++ I G+ YSKLKYE+G
Sbjct: 123 GEEAALFAGNLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R S VG+G
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ NRVTDHR+ + + L L+G +D V++ +Q L++
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASKLQQ 356
>gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
20745]
gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
20745]
Length = 361
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 246/352 (69%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +KL+ +++L LADPEVV+NP + + + A+L+EVV+TYR K + ++ E
Sbjct: 4 LTSKLDQLEARFEELDRLLADPEVVTNPEKLAEYGRERADLEEVVTTYRTRKRVDAEIAE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +L + D ++ E+ E+K L E L+ ++++LL+P DP D +N+++E+RAG G
Sbjct: 64 AESLLR--SGDPDLEELAEEELKRLREERERLDNEIRMLLVPKDPNDEKNVIVEIRAGTG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ WK ++S++E GGFK ++ E++G YS+LKYESG
Sbjct: 122 GEEAALFAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEVRGRGAYSELKYESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PEA+EV++ I+ +D+ + RS G GGQ+VN +
Sbjct: 182 VHRVQRVPVTESGGRIHTSTATVAVLPEAEEVDIQINEEDLRIDVFRSTGHGGQSVNTTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q++N+++A+ +LRA+LY+++ R E+ R SQVGTG
Sbjct: 242 SAVRITHLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLEQRRLHEERSGMRRSQVGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
RAEKIRTYN+ +RVTDHRLK++ L L+G ID ++ A +Q E L
Sbjct: 302 ERAEKIRTYNFPQDRVTDHRLKLSLGNLPEILNGEIDTFIRELRAADQAERL 353
>gi|421490890|ref|ZP_15938257.1| peptide chain release factor 1 [Streptococcus anginosus SK1138]
gi|400371887|gb|EJP24836.1| peptide chain release factor 1 [Streptococcus anginosus SK1138]
Length = 359
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 237/352 (67%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A ++V+TYR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDMVATYREYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDASGDVDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6]
gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae
CDC0288-04]
gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae
CDC3059-06]
gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
700669]
gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974]
gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI
1974M2]
gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae
SP14-BS292]
gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200]
gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
gi|383939133|ref|ZP_09992320.1| peptide chain release factor 1 [Streptococcus pseudopneumoniae
SK674]
gi|387626371|ref|YP_006062546.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104]
gi|387759265|ref|YP_006066243.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200]
gi|405761137|ref|YP_006701733.1| peptide chain release factor 1 [Streptococcus pneumoniae SPNA45]
gi|410476571|ref|YP_006743330.1| peptide chain release factor 1 [Streptococcus pneumoniae
gamPNI0373]
gi|415698363|ref|ZP_11457136.1| peptide chain release factor 1 [Streptococcus pneumoniae 459-5]
gi|415749420|ref|ZP_11477364.1| peptide chain release factor 1 [Streptococcus pneumoniae SV35]
gi|415752104|ref|ZP_11479215.1| peptide chain release factor 1 [Streptococcus pneumoniae SV36]
gi|417676774|ref|ZP_12326185.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545]
gi|417678973|ref|ZP_12328370.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570]
gi|417686516|ref|ZP_12335793.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301]
gi|417693945|ref|ZP_12343133.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901]
gi|418073806|ref|ZP_12711064.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11184]
gi|418076126|ref|ZP_12713365.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47502]
gi|418078511|ref|ZP_12715734.1| peptide chain release factor 1 [Streptococcus pneumoniae 4027-06]
gi|418080476|ref|ZP_12717688.1| peptide chain release factor 1 [Streptococcus pneumoniae 6735-05]
gi|418086748|ref|ZP_12723918.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47033]
gi|418089414|ref|ZP_12726571.1| peptide chain release factor 1 [Streptococcus pneumoniae GA43265]
gi|418096141|ref|ZP_12733256.1| peptide chain release factor 1 [Streptococcus pneumoniae GA16531]
gi|418098389|ref|ZP_12735488.1| peptide chain release factor 1 [Streptococcus pneumoniae 6901-05]
gi|418105088|ref|ZP_12742146.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44500]
gi|418112383|ref|ZP_12749385.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41538]
gi|418114517|ref|ZP_12751507.1| peptide chain release factor 1 [Streptococcus pneumoniae 5787-06]
gi|418116755|ref|ZP_12753726.1| peptide chain release factor 1 [Streptococcus pneumoniae 6963-05]
gi|418121085|ref|ZP_12758031.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44194]
gi|418123292|ref|ZP_12760226.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44378]
gi|418125644|ref|ZP_12762554.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44511]
gi|418127879|ref|ZP_12764775.1| peptide chain release factor 1 [Streptococcus pneumoniae NP170]
gi|418132862|ref|ZP_12769735.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11304]
gi|418135081|ref|ZP_12771938.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11426]
gi|418137056|ref|ZP_12773898.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11663]
gi|418139372|ref|ZP_12776202.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13338]
gi|418146240|ref|ZP_12783022.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13637]
gi|418148444|ref|ZP_12785209.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13856]
gi|418155055|ref|ZP_12791786.1| peptide chain release factor 1 [Streptococcus pneumoniae GA16242]
gi|418166797|ref|ZP_12803453.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17971]
gi|418173392|ref|ZP_12810006.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41277]
gi|418178056|ref|ZP_12814640.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41565]
gi|418180193|ref|ZP_12816765.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41688]
gi|418182775|ref|ZP_12819335.1| peptide chain release factor 1 [Streptococcus pneumoniae GA43380]
gi|418191564|ref|ZP_12828068.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47388]
gi|418193654|ref|ZP_12830146.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47439]
gi|418202288|ref|ZP_12838718.1| peptide chain release factor 1 [Streptococcus pneumoniae GA52306]
gi|418214193|ref|ZP_12840928.1| peptide chain release factor 1 [Streptococcus pneumoniae GA54644]
gi|418216470|ref|ZP_12843194.1| peptide chain release factor 1 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418225446|ref|ZP_12852075.1| peptide chain release factor 1 [Streptococcus pneumoniae NP112]
gi|418234214|ref|ZP_12860793.1| peptide chain release factor 1 [Streptococcus pneumoniae GA08780]
gi|418972460|ref|ZP_13520585.1| peptide chain release factor 1 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|419431548|ref|ZP_13971688.1| peptide chain release factor 1 [Streptococcus pneumoniae EU-NP05]
gi|419433523|ref|ZP_13973641.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40183]
gi|419440299|ref|ZP_13980350.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40410]
gi|419455418|ref|ZP_13995378.1| peptide chain release factor 1 [Streptococcus pneumoniae EU-NP04]
gi|419457402|ref|ZP_13997347.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02254]
gi|419464130|ref|ZP_14004023.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04175]
gi|419468886|ref|ZP_14008757.1| peptide chain release factor 1 [Streptococcus pneumoniae GA06083]
gi|419470971|ref|ZP_14010830.1| peptide chain release factor 1 [Streptococcus pneumoniae GA07914]
gi|419473086|ref|ZP_14012937.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13430]
gi|419482040|ref|ZP_14021833.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40563]
gi|419484117|ref|ZP_14023893.1| peptide chain release factor 1 [Streptococcus pneumoniae GA43257]
gi|419490932|ref|ZP_14030672.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47179]
gi|419497204|ref|ZP_14036914.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47522]
gi|419503829|ref|ZP_14043498.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47760]
gi|419508087|ref|ZP_14047740.1| peptide chain release factor 1 [Streptococcus pneumoniae GA49542]
gi|419514575|ref|ZP_14054202.1| peptide chain release factor 1 [Streptococcus pneumoniae
England14-9]
gi|419532358|ref|ZP_14071874.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47794]
gi|419534490|ref|ZP_14073993.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17457]
gi|421217566|ref|ZP_15674467.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070335]
gi|421220166|ref|ZP_15677015.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070425]
gi|421223490|ref|ZP_15680267.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070531]
gi|421227188|ref|ZP_15683896.1| peptide chain release factor 1 [Streptococcus pneumoniae 2072047]
gi|421231790|ref|ZP_15688434.1| peptide chain release factor 1 [Streptococcus pneumoniae 2080076]
gi|421236161|ref|ZP_15692762.1| peptide chain release factor 1 [Streptococcus pneumoniae 2071004]
gi|421238772|ref|ZP_15695339.1| peptide chain release factor 1 [Streptococcus pneumoniae 2071247]
gi|421244838|ref|ZP_15701339.1| peptide chain release factor 1 [Streptococcus pneumoniae 2081685]
gi|421266042|ref|ZP_15716925.1| peptide chain release factor 1 [Streptococcus pneumoniae SPAR27]
gi|421268596|ref|ZP_15719466.1| peptide chain release factor 1 [Streptococcus pneumoniae SPAR95]
gi|421275785|ref|ZP_15726612.1| peptide chain release factor 1 [Streptococcus pneumoniae GA52612]
gi|421278792|ref|ZP_15729600.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17301]
gi|421281004|ref|ZP_15731802.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04672]
gi|421285281|ref|ZP_15736058.1| peptide chain release factor 1 [Streptococcus pneumoniae GA60190]
gi|421294299|ref|ZP_15745022.1| peptide chain release factor 1 [Streptococcus pneumoniae GA56113]
gi|421295988|ref|ZP_15746700.1| peptide chain release factor 1 [Streptococcus pneumoniae GA58581]
gi|421300883|ref|ZP_15751553.1| peptide chain release factor 1 [Streptococcus pneumoniae GA19998]
gi|421307288|ref|ZP_15757932.1| peptide chain release factor 1 [Streptococcus pneumoniae GA60132]
gi|421309456|ref|ZP_15760083.1| peptide chain release factor 1 [Streptococcus pneumoniae GA62681]
gi|421314191|ref|ZP_15764781.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47562]
gi|444383770|ref|ZP_21181952.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS8106]
gi|444386414|ref|ZP_21184471.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS8203]
gi|444388290|ref|ZP_21186277.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS125219]
gi|444389848|ref|ZP_21187763.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS70012]
gi|444392409|ref|ZP_21190140.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS81218]
gi|444395458|ref|ZP_21193002.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0002]
gi|444397480|ref|ZP_21194963.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0006]
gi|444400073|ref|ZP_21197495.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0007]
gi|444403307|ref|ZP_21200411.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0008]
gi|444405127|ref|ZP_21202049.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0009]
gi|444408695|ref|ZP_21205328.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0010]
gi|444411187|ref|ZP_21207647.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0076]
gi|444413195|ref|ZP_21209511.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0153]
gi|444414341|ref|ZP_21210622.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0199]
gi|444417324|ref|ZP_21213369.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0360]
gi|444419494|ref|ZP_21215353.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0427]
gi|444422687|ref|ZP_21218334.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0446]
gi|32171541|sp|Q8DPZ4.1|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|122278730|sp|Q04KR4.1|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238691157|sp|B2IPH6.1|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790899|sp|C1C6Z5.1|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790900|sp|B8ZPH1.1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790902|sp|C1CE12.1|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790903|sp|C1CK98.1|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6]
gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae
CDC0288-04]
gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae
CDC3059-06]
gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
700669]
gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104]
gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200]
gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae
SP14-BS292]
gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200]
gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570]
gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301]
gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545]
gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901]
gi|353747702|gb|EHD28358.1| peptide chain release factor 1 [Streptococcus pneumoniae 4027-06]
gi|353749915|gb|EHD30558.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47502]
gi|353750653|gb|EHD31291.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11184]
gi|353753016|gb|EHD33640.1| peptide chain release factor 1 [Streptococcus pneumoniae 6735-05]
gi|353759009|gb|EHD39595.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47033]
gi|353762100|gb|EHD42663.1| peptide chain release factor 1 [Streptococcus pneumoniae GA43265]
gi|353769749|gb|EHD50265.1| peptide chain release factor 1 [Streptococcus pneumoniae 6901-05]
gi|353771128|gb|EHD51639.1| peptide chain release factor 1 [Streptococcus pneumoniae GA16531]
gi|353777153|gb|EHD57626.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44500]
gi|353784249|gb|EHD64670.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41538]
gi|353787259|gb|EHD67666.1| peptide chain release factor 1 [Streptococcus pneumoniae 5787-06]
gi|353789732|gb|EHD70124.1| peptide chain release factor 1 [Streptococcus pneumoniae 6963-05]
gi|353793912|gb|EHD74271.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44194]
gi|353797379|gb|EHD77714.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44378]
gi|353797610|gb|EHD77943.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44511]
gi|353800340|gb|EHD80654.1| peptide chain release factor 1 [Streptococcus pneumoniae NP170]
gi|353806818|gb|EHD87091.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11304]
gi|353813119|gb|EHD93352.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13856]
gi|353815036|gb|EHD95258.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13637]
gi|353823347|gb|EHE03522.1| peptide chain release factor 1 [Streptococcus pneumoniae GA16242]
gi|353830393|gb|EHE10523.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17971]
gi|353840091|gb|EHE20165.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41277]
gi|353844830|gb|EHE24873.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41565]
gi|353846159|gb|EHE26194.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41688]
gi|353848916|gb|EHE28926.1| peptide chain release factor 1 [Streptococcus pneumoniae GA43380]
gi|353857465|gb|EHE37428.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47388]
gi|353859634|gb|EHE39584.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47439]
gi|353868091|gb|EHE47981.1| peptide chain release factor 1 [Streptococcus pneumoniae GA52306]
gi|353871476|gb|EHE51347.1| peptide chain release factor 1 [Streptococcus pneumoniae GA54644]
gi|353873521|gb|EHE53382.1| peptide chain release factor 1 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353882754|gb|EHE62565.1| peptide chain release factor 1 [Streptococcus pneumoniae NP112]
gi|353888459|gb|EHE68233.1| peptide chain release factor 1 [Streptococcus pneumoniae GA08780]
gi|353901683|gb|EHE77215.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11663]
gi|353902318|gb|EHE77848.1| peptide chain release factor 1 [Streptococcus pneumoniae GA11426]
gi|353905615|gb|EHE81038.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13338]
gi|379532400|gb|EHY97629.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02254]
gi|379539349|gb|EHZ04528.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04175]
gi|379545687|gb|EHZ10826.1| peptide chain release factor 1 [Streptococcus pneumoniae GA07914]
gi|379546989|gb|EHZ12127.1| peptide chain release factor 1 [Streptococcus pneumoniae GA06083]
gi|379552593|gb|EHZ17682.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13430]
gi|379565224|gb|EHZ30217.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17457]
gi|379576524|gb|EHZ41448.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40183]
gi|379579731|gb|EHZ44630.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40410]
gi|379580914|gb|EHZ45803.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40563]
gi|379583628|gb|EHZ48505.1| peptide chain release factor 1 [Streptococcus pneumoniae GA43257]
gi|379594511|gb|EHZ59321.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47179]
gi|379601197|gb|EHZ65973.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47522]
gi|379606142|gb|EHZ70891.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47794]
gi|379606506|gb|EHZ71253.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47760]
gi|379611805|gb|EHZ76527.1| peptide chain release factor 1 [Streptococcus pneumoniae GA49542]
gi|379629875|gb|EHZ94469.1| peptide chain release factor 1 [Streptococcus pneumoniae EU-NP04]
gi|379630115|gb|EHZ94705.1| peptide chain release factor 1 [Streptococcus pneumoniae EU-NP05]
gi|379637671|gb|EIA02224.1| peptide chain release factor 1 [Streptococcus pneumoniae
England14-9]
gi|381309800|gb|EIC50633.1| peptide chain release factor 1 [Streptococcus pneumoniae SV36]
gi|381317015|gb|EIC57751.1| peptide chain release factor 1 [Streptococcus pneumoniae 459-5]
gi|381317714|gb|EIC58439.1| peptide chain release factor 1 [Streptococcus pneumoniae SV35]
gi|383351977|gb|EID29731.1| peptide chain release factor 1 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383713979|gb|EID69998.1| peptide chain release factor 1 [Streptococcus pseudopneumoniae
SK674]
gi|395585052|gb|EJG45444.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070335]
gi|395585949|gb|EJG46327.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070531]
gi|395588170|gb|EJG48503.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070425]
gi|395595819|gb|EJG56045.1| peptide chain release factor 1 [Streptococcus pneumoniae 2080076]
gi|395596015|gb|EJG56239.1| peptide chain release factor 1 [Streptococcus pneumoniae 2072047]
gi|395602035|gb|EJG62180.1| peptide chain release factor 1 [Streptococcus pneumoniae 2071247]
gi|395605080|gb|EJG65212.1| peptide chain release factor 1 [Streptococcus pneumoniae 2071004]
gi|395609338|gb|EJG69425.1| peptide chain release factor 1 [Streptococcus pneumoniae 2081685]
gi|395868778|gb|EJG79895.1| peptide chain release factor 1 [Streptococcus pneumoniae SPAR27]
gi|395870091|gb|EJG81205.1| peptide chain release factor 1 [Streptococcus pneumoniae SPAR95]
gi|395872205|gb|EJG83304.1| peptide chain release factor 1 [Streptococcus pneumoniae GA52612]
gi|395880225|gb|EJG91278.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17301]
gi|395882165|gb|EJG93212.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04672]
gi|395887260|gb|EJG98275.1| peptide chain release factor 1 [Streptococcus pneumoniae GA60190]
gi|395894589|gb|EJH05569.1| peptide chain release factor 1 [Streptococcus pneumoniae GA56113]
gi|395897201|gb|EJH08165.1| peptide chain release factor 1 [Streptococcus pneumoniae GA58581]
gi|395898443|gb|EJH09387.1| peptide chain release factor 1 [Streptococcus pneumoniae GA19998]
gi|395907895|gb|EJH18780.1| peptide chain release factor 1 [Streptococcus pneumoniae GA60132]
gi|395910877|gb|EJH21746.1| peptide chain release factor 1 [Streptococcus pneumoniae GA62681]
gi|395914691|gb|EJH25535.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47562]
gi|404278026|emb|CCM08600.1| peptide chain release factor 1 [Streptococcus pneumoniae SPNA45]
gi|406369516|gb|AFS43206.1| peptide chain release factor 1 [Streptococcus pneumoniae
gamPNI0373]
gi|444247757|gb|ELU54288.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS8203]
gi|444248424|gb|ELU54932.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS8106]
gi|444249904|gb|ELU56389.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS125219]
gi|444256311|gb|ELU62649.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS70012]
gi|444258101|gb|ELU64431.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0002]
gi|444260137|gb|ELU66445.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0006]
gi|444263458|gb|ELU69626.1| peptide chain release factor 1 [Streptococcus pneumoniae PCS81218]
gi|444264691|gb|ELU70748.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0008]
gi|444267333|gb|ELU73239.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0007]
gi|444269522|gb|ELU75329.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0010]
gi|444273354|gb|ELU79027.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0153]
gi|444275067|gb|ELU80695.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0076]
gi|444275486|gb|ELU81112.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0009]
gi|444282527|gb|ELU87783.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0199]
gi|444283975|gb|ELU89143.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0360]
gi|444286723|gb|ELU91686.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0427]
gi|444287970|gb|ELU92875.1| peptide chain release factor 1 [Streptococcus pneumoniae PNI0446]
Length = 359
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|418143838|ref|ZP_12780638.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13494]
gi|353809579|gb|EHD89839.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13494]
Length = 359
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVAALVLYDQTQKLEEL 357
>gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321]
gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321]
Length = 359
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASSRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE +DPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDLDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|339443178|ref|YP_004709183.1| hypothetical protein CXIVA_21140 [Clostridium sp. SY8519]
gi|338902579|dbj|BAK48081.1| hypothetical protein CXIVA_21140 [Clostridium sp. SY8519]
Length = 357
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 235/348 (67%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE + ++++ L +P+VV++ +Q L + +EL +V Y+++K+C++ E+
Sbjct: 1 MFDKLEDTLRRFEEILHLLTEPDVVNDQKRFQALMKEQSELSPIVEAYKEYKNCQETAED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A+ +E DEEM E+ E N + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 ALAILQEE-KDEEMRELAKEEKAEAENRIGELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y+E WK + E GG K V I G YSK+KYESG
Sbjct: 120 GDEAALFAAEVYRMYVHYAESQHWKVETMDVEEIGIGGMKYVSFMISGQGAYSKMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA++V+V ++ D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAIMPEAEDVDVELNMNDCKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++QL+NK +AL++LRAKLY++++++ + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKEKALKVLRAKLYDMELQKAHDAEADARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+K+ ++L + L+G++ + + A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLYKLDAILNGDLQEIIDNLIAADQ 347
>gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
Length = 358
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPE++S+ ++ ++ ++ +++ + V YR++KD +QL +
Sbjct: 4 VLDRLQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM +M+ E+ L + EL E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAMLEEK-LDAEMRDMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|339006937|ref|ZP_08639512.1| peptide chain release factor 1 [Brevibacillus laterosporus LMG
15441]
gi|421873345|ref|ZP_16304959.1| peptide chain release factor 1 [Brevibacillus laterosporus GI-9]
gi|338776146|gb|EGP35674.1| peptide chain release factor 1 [Brevibacillus laterosporus LMG
15441]
gi|372457671|emb|CCF14508.1| peptide chain release factor 1 [Brevibacillus laterosporus GI-9]
Length = 357
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 240/352 (68%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L + + +++++ L DP+V+S+ + ++L++ + L+++V+ YR++K QL++
Sbjct: 1 MFKRLSAVEERYEEVTNLLCDPDVISDTKKLRELSKEQSSLEDMVTAYREYKSVLTQLDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+A+ +E +DE M EM+ EI LS ELE +LK+LLLP DP D +N+++E+R AG
Sbjct: 61 SKAMFEEKLDDE-MREMVKMEIAELSKSKEELENRLKILLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A L RMY +++E++ +K ++ ++E + GGFK +V + G YSKLK+ESG
Sbjct: 120 GDEAALFASSLYRMYTRFAERHGFKIDVMEANETDIGGFKEIVFAVNGRGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+ GR+HTSTATV ++PE +EV+V I KDI + T S GAGGQ+VN +
Sbjct: 180 AHRVQRIPSTESGGRIHTSTATVLVLPEVEEVDVEISDKDIRIDTFCSSGAGGQSVNTTK 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q NK +AL++LRA+L + ++ +I R S VGTG
Sbjct: 240 SAVRVTHLPTGIMVSCQDEKSQHSNKDKALKILRARLSDFYRQQANAEIDANRKSLVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ +RVTDHR+ + L LDG++D + + EQ EL+
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTLHRLEGILDGDMDEIIDNLIMHEQTELM 351
>gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
Length = 359
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 236/352 (67%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A + V+TYR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYREYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1]
gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1]
gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf.
saccharolyticum K10]
gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1)
[butyrate-producing bacterium SM4/1]
Length = 358
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 242/359 (67%), Gaps = 2/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ +++L +L +P VV + +++KL + A+L +V Y+ +K + +E+
Sbjct: 1 MFDRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S AL +E + EEM E+ E+ + ELE++LK+LLLP DP D +N+M+E+RAGAG
Sbjct: 61 SVALLEEESD-EEMRELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVMVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E+ WK ++S +E GGFK VV + G YSKLKYESG
Sbjct: 120 GDEAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTSTATVA+MPEA+E ++ ID D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTATVAVMPEAEEFDIEIDMNDCRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ +Q + R SQ+GTG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQSEESEARRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+ RVT+HR+K+ +++ S +DG +D + S A +Q L +L E V
Sbjct: 300 DRSEKIRTYNFPQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIAADQAAKLAKLNEEV 358
>gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
Length = 359
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 235/352 (66%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A + V+TYR +K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYRDYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|340355729|ref|ZP_08678405.1| peptide chain release factor RF1 [Sporosarcina newyorkensis 2681]
gi|339622137|gb|EGQ26668.1| peptide chain release factor RF1 [Sporosarcina newyorkensis 2681]
Length = 358
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 240/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ + L+ L+DPE+V++ + + ++ ++L E V YR++K+ + Q +
Sbjct: 1 MFDRLQAVEDRYDRLNELLSDPEIVNDLEKLRNYSKEQSDLQETVEVYREYKEVQAQYKN 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E +DE M E++ EI L + LEE+LK+LL+P DP D +++++E+R AG
Sbjct: 61 AKEMLEEPLDDE-MKELVKMEIDELEERIEPLEERLKILLVPKDPNDNKSVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AG L RMY +++E N WK +I SS E GGFK ++ I GN YSKLKYE+G
Sbjct: 120 GDEAALFAGSLYRMYTRFAEMNHWKVEVIDSSPTELGGFKEIIFMIDGNGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PEA+EVE+ I KD+ T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEAEEVEIEIHDKDVRTDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + C +E++Q++NK +A+++LRA++Y+ ++E + + +R S VG+G
Sbjct: 240 SAVRLTHLPTGITVSCQDEKSQIKNKEKAMKVLRARVYDKFMQEARAEYDEKRKSAVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ NR+TDHR+ + + L ++G +D + + EQ LE L ++
Sbjct: 300 DRSERIRTYNFPQNRITDHRIGLTIQKLDQIIEGKLDEVIDALIIEEQAHRLESLDQN 357
>gi|421211122|ref|ZP_15668105.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070035]
gi|395573080|gb|EJG33671.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070035]
Length = 359
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
Length = 362
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES +++L ++DPEV+++ +Y ++++ A+L EVV Y+ F + + ++
Sbjct: 4 VMAQLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIAN 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D ++ +M E +L E+ +LEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISHE-SDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMYQKY+E W+ ++I + E E GGFK V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q +R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +++ + + Q + LE++A+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359
>gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1]
gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
gi|349611646|ref|ZP_08890879.1| peptide chain release factor 1 [Lactobacillus sp. 7_1_47FAA]
gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
gi|348608493|gb|EGY58475.1| peptide chain release factor 1 [Lactobacillus sp. 7_1_47FAA]
Length = 362
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 248/357 (69%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LES +++L ++DPEV+++ +Y ++++ A+L EVV Y+ F + + ++
Sbjct: 4 VMAQLESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIAN 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D ++ +M E +L E+ +LEE++K+L+LP DP D ++I++E+R AG
Sbjct: 64 NKEIISHE-SDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+RMYQKY+E W+ ++I + E E GGFK V + I G++VYSKLKYE+G
Sbjct: 123 GDEASLFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQR+P TE+QGRVHTSTATVA+MPE ++V++ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+Q+L++++Y+ + Q +R VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQASYDAKRKESVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYNY NRVTDHR+ + +L ++G +++ + + Q + LE++A+
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDIISALVLYYQTKQLEKMAD 359
>gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804]
gi|229470349|sp|A9IER8.1|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii]
Length = 360
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 239/358 (66%), Gaps = 6/358 (1%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
++LE + ++ LA+P+ ++ ++KL++ AEL+ VV + +F E L
Sbjct: 7 SRLEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTEDDL---- 62
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
A A+E D +M M EIK+ L +LE +L+VLLLP DP D R++ LE+RAG GGD
Sbjct: 63 ATAQEMLADPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIRAGTGGD 122
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
E+ +++GDL+RMY +Y+EQ W+ L+S S +E GG+K V+ I G+ Y +LK+ESG H
Sbjct: 123 ESALFSGDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESGAH 182
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVP TEAQGR+HTS TVA+MPEAD + ++VI+P D+ + T R+ GAGGQ++NK ++
Sbjct: 183 RVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKTDS 242
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTG+ + C ++R+Q +NK +A+Q+L A+L + ++RE+Q K +R S VG+G
Sbjct: 243 AVRITHLPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQSKEAAERKSLVGSGD 302
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+E+IRTYN+ RVTDHR+ + ++L ++G+++ + A Q E L L + V
Sbjct: 303 RSERIRTYNFPQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQAEQLAALGDDV 360
>gi|398942263|ref|ZP_10670201.1| peptide chain release factor 1 [Pseudomonas sp. GM41(2012)]
gi|398160815|gb|EJM49070.1| peptide chain release factor 1 [Pseudomonas sp. GM41(2012)]
Length = 360
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQAKFRTYSKEYAEVEPIVETYKQLLKVQSDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +LI++E L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLIDIEASLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S + E GGFK V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENIGEHGGFKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T +S GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPSDLRIDTYKSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
Ancestor']
gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1]
gi|375287353|ref|YP_005107792.1| peptide chain release factor 1 [Bacillus cereus NC7401]
gi|402554579|ref|YP_006595850.1| peptide chain release factor 1 [Bacillus cereus FRI-35]
gi|421509506|ref|ZP_15956411.1| peptide chain release factor 1 [Bacillus anthracis str. UR-1]
gi|421640600|ref|ZP_16081181.1| peptide chain release factor 1 [Bacillus anthracis str. BF1]
gi|423355810|ref|ZP_17333434.1| peptide chain release factor 1 [Bacillus cereus IS075]
gi|423375118|ref|ZP_17352455.1| peptide chain release factor 1 [Bacillus cereus AND1407]
gi|423554217|ref|ZP_17530543.1| peptide chain release factor 1 [Bacillus cereus ISP3191]
gi|423571878|ref|ZP_17548115.1| peptide chain release factor 1 [Bacillus cereus MSX-A12]
gi|423573019|ref|ZP_17549138.1| peptide chain release factor 1 [Bacillus cereus MSX-D12]
gi|423608327|ref|ZP_17584219.1| peptide chain release factor 1 [Bacillus cereus VD102]
gi|46576768|sp|Q81JX1.1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|61214595|sp|Q630R9.2|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|61214623|sp|Q6HAV4.2|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|61214641|sp|Q72XC2.1|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790861|sp|B9IRW2.1|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
Ancestor']
gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1]
gi|358355880|dbj|BAL21052.1| peptide chain release factor 1 [Bacillus cereus NC7401]
gi|401081835|gb|EJP90108.1| peptide chain release factor 1 [Bacillus cereus IS075]
gi|401092995|gb|EJQ01116.1| peptide chain release factor 1 [Bacillus cereus AND1407]
gi|401181356|gb|EJQ88507.1| peptide chain release factor 1 [Bacillus cereus ISP3191]
gi|401199302|gb|EJR06206.1| peptide chain release factor 1 [Bacillus cereus MSX-A12]
gi|401216488|gb|EJR23200.1| peptide chain release factor 1 [Bacillus cereus MSX-D12]
gi|401238336|gb|EJR44777.1| peptide chain release factor 1 [Bacillus cereus VD102]
gi|401795789|gb|AFQ09648.1| peptide chain release factor 1 [Bacillus cereus FRI-35]
gi|401820483|gb|EJT19648.1| peptide chain release factor 1 [Bacillus anthracis str. UR-1]
gi|403392279|gb|EJY89534.1| peptide chain release factor 1 [Bacillus anthracis str. BF1]
Length = 355
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP ++S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 352
>gi|377831957|ref|ZP_09814921.1| peptide chain release factor RF1 [Lactobacillus mucosae LM1]
gi|377553964|gb|EHT15679.1| peptide chain release factor RF1 [Lactobacillus mucosae LM1]
Length = 362
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 238/355 (67%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ A + +L+ ++DPEV+++ + + KL++ L E V Y ++K + +++
Sbjct: 6 IFDKLQAVADRYDELNELISDPEVIADTARFMKLSKEEGSLRETVEKYNEYKQVTQTIKD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +E +D ++ M EI S LE++L+VLL+P DP D +NI++E+R AG
Sbjct: 66 DEEMLREI-DDPDLTAMTKDEIASSKERQATLEKELEVLLIPKDPNDDKNIIMEIRGAAG 124
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY +Y+E+ WK ++ +E E GGFK + + I G++VYSKLK+E+G
Sbjct: 125 GDEASLFAADLYDMYLRYAEKQGWKVEVVDKNETEVGGFKEISLLITGDKVYSKLKFENG 184
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPEA++VE+ IDPKDI RS GAGGQ++NK
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVGVMPEAEDVEIDIDPKDIRTDVYRSSGAGGQHINKTS 244
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +ER+Q QN+++A+++L+A++Y+ +++Q +R +GTG
Sbjct: 245 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQKEQNAYDQKRKDAIGTG 304
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L + G++D +++ +Q + LE+L
Sbjct: 305 DRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIIADQTKKLEQL 359
>gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
16841]
gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
16841]
Length = 358
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 238/348 (68%), Gaps = 2/348 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE +++L +L++P+V +NP ++KL + +++ +V Y+++K C++ +E+
Sbjct: 1 MFDKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S A+ +E + EEM E+ E+ N + ELE +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLAMLEEESD-EEMRELAKEELNDAKNRVAELENELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMYQ Y+E +WK ++ + GG K+V I G YS +KYESG
Sbjct: 120 GDEAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA++V+V ID KDI + R+ GAGGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEDVDVQIDEKDIRIDVCRASGAGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++Q+QNK++A LLR KL++++ ++ + R SQ+GTG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQKAHDAEAELRKSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQ 400
R+EKIRTYN+ RVTDHR+ + ++L ++G+I + +C A +Q
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347
>gi|365925059|ref|ZP_09447822.1| peptide chain release factor 1 [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420266224|ref|ZP_14768711.1| peptide chain release factor 1 [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394426081|gb|EJE98976.1| peptide chain release factor 1 [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 360
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 237/355 (66%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+S +++L L+DP+++S+ ++ L++ MA+L E V Y ++K+ + +++
Sbjct: 4 LFDRLQSLEDRYEELGELLSDPDIISDTRKFTSLSKEMADLRETVEKYNQYKEVVQTIKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ E +DE MA M+ E+ + ++ LE ++K+LLLP DP D +NI++E+R AG
Sbjct: 64 DEEMLGEKLDDE-MASMVKEELATAKSDKEALESEIKILLLPKDPNDDKNIIMEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A DL MY K++E+ W ++ + E GGFK + + I G+ VYSKLKYESG
Sbjct: 123 GDEASLFAADLFGMYSKFAEKEGWTIEVLDKNVTEVGGFKEIALLINGDSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GRVHTSTATV +MPE ++VE+ +DPKDI + RS GAGGQ++NK
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVVVMPEEEDVEIDLDPKDIRVDVYRSSGAGGQHINKTS 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + ++R+Q QN+ +A+++L+A++Y+ ++Q + R S VGTG
Sbjct: 243 SAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYSSKEQSEYDQNRKSAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G +++ + + +Q + LE L
Sbjct: 303 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELEDVIDALILFDQTKALESL 357
>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
Length = 356
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 240/360 (66%), Gaps = 6/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ + +L+V L + SN Y+K+ + AEL +V+ Y + + +++
Sbjct: 1 MLAKLDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +D +M E E+ + + +LE L+ +LLP DP D RNI LE+RAG G
Sbjct: 61 AQGML----SDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTG 116
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++AGDL+RMY +++E+N W+ ++S S +E GG+K V++ I GN YSKLK+ESG
Sbjct: 117 GDESALFAGDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESG 176
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE QGR+HTS TVA+MPEADEVE V I+P D+ + T R+ GAGGQ++NK
Sbjct: 177 GHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKT 236
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTGI + C ++R+Q +NK+ AL++L A++ ++++REQQ + R S +G+
Sbjct: 237 DSAVRITHIPTGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKSLIGS 296
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
G R+E+IRTYN+ R+TDHR+ + ++L +DG++ + AA Q +LL L ++V
Sbjct: 297 GDRSERIRTYNFPQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQADLLAALGDAV 356
>gi|343524931|ref|ZP_08761887.1| peptide chain release factor 1 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|423068533|ref|ZP_17057321.1| peptide chain release factor 1 [Streptococcus intermedius F0395]
gi|343396803|gb|EGV09339.1| peptide chain release factor 1 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|355366788|gb|EHG14505.1| peptide chain release factor 1 [Streptococcus intermedius F0395]
Length = 359
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 236/352 (67%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + + ++ A + + V+TYR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMEFSKEEASIRDTVTTYREYKKVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDASGDVDLEEMAKQELKDAKTEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|419466462|ref|ZP_14006345.1| peptide chain release factor 1 [Streptococcus pneumoniae GA05248]
gi|419512413|ref|ZP_14052047.1| peptide chain release factor 1 [Streptococcus pneumoniae GA05578]
gi|419516692|ref|ZP_14056310.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02506]
gi|421283208|ref|ZP_15733995.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04216]
gi|379544585|gb|EHZ09729.1| peptide chain release factor 1 [Streptococcus pneumoniae GA05248]
gi|379636883|gb|EIA01441.1| peptide chain release factor 1 [Streptococcus pneumoniae GA05578]
gi|379640695|gb|EIA05234.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02506]
gi|395881171|gb|EJG92220.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04216]
Length = 359
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D + EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDANLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 355
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 245/344 (71%), Gaps = 2/344 (0%)
Query: 65 WKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRALAKENGND 124
+ +L L + +V++N + YQK A AEL+ +V YR++K E+ L ++ L E+ +D
Sbjct: 12 YVELEKDLVNVDVINNSALYQKTAIEHAELEPIVHKYREYKKLEEDLSGNKELLTEDLDD 71
Query: 125 EEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDL 184
+ M +++ +IK++ EL ++ E+LK LL+P DP D +N+++E+RAGAGGDEA ++AG L
Sbjct: 72 D-MLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGGDEAALFAGVL 130
Query: 185 VRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTE 244
+R Y Y+E+ +K ++S++E GG+K VV I+G YSKLKYESGVHRVQRVP+TE
Sbjct: 131 LRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGVHRVQRVPETE 190
Query: 245 AQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTG 304
+ GR+HTSTATVA++PEA++VE+ IDP DI + RS G GGQ+VN ++A+ + H PTG
Sbjct: 191 SSGRIHTSTATVAVLPEAEDVEIEIDPSDIRVDVFRSSGNGGQSVNTTDSAVRITHLPTG 250
Query: 305 IRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNY 364
I I C +E++QL+NK +A+++L+ KLY++++++Q +++ ++ SQ+G+G R+E+IRTYNY
Sbjct: 251 IVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQELSAEKRSQIGSGDRSERIRTYNY 310
Query: 365 KDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
RVTDHR+ + + + + +G++D + + + + +E +
Sbjct: 311 PQGRVTDHRIGLTSHRIDAINNGDLDEIIDALTQYYEAKKIENM 354
>gi|337281977|ref|YP_004621448.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
15912]
gi|335369570|gb|AEH55520.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
15912]
Length = 359
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G+D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGDDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|358451346|ref|ZP_09161780.1| peptide chain release factor 1 [Marinobacter manganoxydans MnI7-9]
gi|385330453|ref|YP_005884404.1| peptide chain release factor 1 [Marinobacter adhaerens HP15]
gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [Marinobacter adhaerens HP15]
gi|357224579|gb|EHJ03110.1| peptide chain release factor 1 [Marinobacter manganoxydans MnI7-9]
Length = 362
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 239/360 (66%), Gaps = 4/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE + ++++S L+D ++S +++ L++ AE++ +V ++ ++ +
Sbjct: 3 PSIQSRLEQLSDRFEEVSALLSDSSIISQQDKFRDLSREFAEIEPIVHCFQAWQHSLDDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E +R LAK+ D +M EM E++ + EL+E+L+ L+LP DP D +N+ LE+RAG
Sbjct: 63 EAARELAKDG--DADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA I+AGDL RMY +Y+E+ W+ ++S SE E GGFK ++ + G+ VY LK+E
Sbjct: 121 TGGDEAAIFAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP+TE+QGR+HTS TVA+MPEADE E + ++ D+ + T R+ GAGGQ+VN
Sbjct: 181 SGAHRVQRVPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H PTGI + C EER+Q +N+++AL LL ++L + QQ+ + R S V
Sbjct: 241 KTDSAIRITHLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQKSMAETRKSLV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYN+ RVTDHR+ + ++L + G++D V Q ELL LA+
Sbjct: 301 GSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGDLDAVVVPLQQEHQAELLASLAD 360
>gi|418964908|ref|ZP_13516696.1| peptide chain release factor 1 [Streptococcus constellatus subsp.
constellatus SK53]
gi|383344309|gb|EID22478.1| peptide chain release factor 1 [Streptococcus constellatus subsp.
constellatus SK53]
Length = 359
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 236/352 (67%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + + ++ A + + V+TYR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMEFSKEEASMRDTVTTYREYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDATGDADLEEMAKQELKDAKTEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204]
gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204]
Length = 358
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 233/352 (66%), Gaps = 3/352 (0%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
TKL K +K++ KL D +V+S+P KL++ A L + V Y + + + ++ ++
Sbjct: 6 TKLSEIEKQYKEIVEKLMDEKVMSDPKLLTKLSKEQARLTQPVEAYHQLLELDSRIAQAD 65
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
+ KEN D E+ EM E E L E+++ LL+P DP D ++++E+R GAGGD
Sbjct: 66 EMLKEN--DPELKEMARMEKDECEPEREVLLERIQHLLVPRDPDDDHDVIMEIRGGAGGD 123
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
E I+AGDL RMY KY+E WK ++ +S +E GG+ ++ +KG VY +LK+ESGVH
Sbjct: 124 EGNIFAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSVKGTDVYKELKFESGVH 183
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA 295
RVQRVP+TE QGR+HTSTATV PEA++ ++ IDPKD+ + T R+ GAGGQ++NK ++A
Sbjct: 184 RVQRVPKTETQGRIHTSTATVLCQPEAEDTDIEIDPKDLTIETHRASGAGGQHINKTDSA 243
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+ + H PTGI + C + R+Q++N+ A++L+RA++YE R Q+E+ R +++GTG R
Sbjct: 244 VRIVHVPTGITVNCQDGRSQIENRETAMRLIRARVYEELKRIQEEEAGKIRRAKIGTGDR 303
Query: 356 AEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEE 406
+EKIRTYNY NRVTDHR+ + +L ++G +D ++ A E+K LEE
Sbjct: 304 SEKIRTYNYPQNRVTDHRISLTITQLDRIMEGKLDGVIEGLLAEEEKRKLEE 355
>gi|379727080|ref|YP_005319265.1| peptide chain release factor 1 [Melissococcus plutonius DAT561]
gi|376317983|dbj|BAL61770.1| peptide chain release factor 1 [Melissococcus plutonius DAT561]
Length = 358
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 234/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DPE++S+ + + KL++ A L E V YR++K + +++
Sbjct: 1 MYDQLQAIEDRYEELGELLSDPEIISDTNRFLKLSKEEANLRETVEVYRRYKQVIQGIKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L E+ + EM EM E+ L E LE+++K+LLLP DP D +NI++E+R AG
Sbjct: 61 TEELLGES-LESEMLEMAKEELSELKQEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AG+L MYQKY+E WK ++ ++ GG+K V+M I G V+SKLKYESG
Sbjct: 120 GDEAALFAGNLFSMYQKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTSTATV +MPEA+EVE+ ++ KDI + GAGGQ++NK
Sbjct: 180 AHRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIDLEDKDIRTDIYHASGAGGQHINKTA 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI + +ER+QL+N+ +A+++LR ++Y+ +E Q R S VGTG
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKILRTRVYDQLQQEAQSAYDADRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + +Q LEEL
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTLQKLDKVLSGKLDEIIDALVLYDQTSKLEEL 354
>gi|342163679|ref|YP_004768318.1| peptide chain release factor 1 [Streptococcus pseudopneumoniae
IS7493]
gi|341933561|gb|AEL10458.1| peptide chain release factor 1 [Streptococcus pseudopneumoniae
IS7493]
Length = 359
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
Length = 359
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 237/352 (67%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG HR
Sbjct: 126 AQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
Length = 356
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 238/357 (66%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + L+ L+DP+++S+ + ++ ++ ++++E V YR++K+ Q ++
Sbjct: 1 MLDRLQSVEDRYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D+EM M+ E+ LS ELE +LK+LLLP DP D +N+++E+R AG
Sbjct: 61 AKAML-EDKLDDEMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL +MY +++E WK +I ++ E GG+K ++ + G YSKLKYE+G
Sbjct: 120 GDEAQLFAGDLYKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVPQTE+ GR+HTSTATVA++PEA+EVEV I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPQTESGGRIHTSTATVAVLPEAEEVEVEIHEKDIRVDTFTSSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG + C +E++Q++NK +A+++LRA++Y+ RE Q + R VGTG
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKVQREVQAEYDQNRKLAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ +RVTDHR+ + + L L G +D + + EQ E ++ E
Sbjct: 300 DRSERIRTYNFPQSRVTDHRIGLTIQKLEQILQGKLDEVIDALIVEEQAEAMQNAEE 356
>gi|392968693|ref|ZP_10334109.1| peptide chain release factor 1 [Fibrisoma limi BUZ 3]
gi|387843055|emb|CCH56163.1| peptide chain release factor 1 [Fibrisoma limi BUZ 3]
Length = 357
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 242/356 (67%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE+ + + +++ ++ PEVVS+ + KL++ +L+++V YR + ++++
Sbjct: 1 MLDQLEAIRERFDEVAQQIVQPEVVSDQKRFMKLSKEYKDLEKIVVQYRAYTQLLEEIDN 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + DE+ E+ +E+ L LEE LK +L+P DP D++N++LE+R G G
Sbjct: 61 AKKIIATE-KDEDFRELAKAELDELVPRRETLEETLKEMLIPKDPNDSKNVILEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMYQ++ ++ W+ +L+ +E GG+K ++ E++G VY KLK+ESG
Sbjct: 120 GDEAAIFAGDLFRMYQRFCDRMGWRMSLVDYTEGTSGGYKEIIAEVEGEDVYGKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGR+HTS A+VA++PEA+EV+V ++ DI T S GAGGQ+VN
Sbjct: 180 VHRVQRVPATETQGRIHTSAASVAVLPEAEEVDVDLNMNDIRKDTFCSSGAGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +ER+QL+N +AL +LR++LYEI++++ + I +QR + VG+G
Sbjct: 240 SAVRLTHLPTGLVVQCQDERSQLKNLEKALTVLRSRLYEIELQKHNDAIASQRKTMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R++KIRTYNY +RVTDHR+ + + L + +DG+ID ++ E E L+E A
Sbjct: 300 DRSDKIRTYNYPQSRVTDHRIGLTVYNLPAVMDGDIDEFIEQLRIAENAERLKEGA 355
>gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
12042]
gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
12042]
Length = 359
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 233/352 (66%), Gaps = 3/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L+S + + +++ ++ PE+VS+P KL + A L + V Y + K +E+
Sbjct: 4 MMKRLQSIEERYNEINEEMMSPEIVSDPKRLAKLGKEQASLKQSVEAYEELKSLNSHIEQ 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ +AKE+ D E+ EM E++ L + L K++VLL+P DP D + ++E+R AG
Sbjct: 64 AEEMAKEH--DPELKEMAQMELEELLPKKEALIAKIEVLLIPKDPNDDHDCIVEIRGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE I+AGDL RMY +Y+E WK ++ SE+E GGF + +KG VY +LK+ESG
Sbjct: 122 GDEGNIFAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLVKGGEVYRQLKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE QGR+HTSTATV ++P+A+E ++ IDP D+ T R+ GAGGQ++NK +
Sbjct: 182 AHRVQRVPKTETQGRIHTSTATVLVLPDAEEADIEIDPADLTFETHRASGAGGQHINKTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C E R+Q +N+ AL+L+RA++YE R+++E+ R +++GTG
Sbjct: 242 SAVRIVHVPTGITVNCQEGRSQHENRETALRLIRARVYEELTRQKEEEEGAVRRAKIGTG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELL 404
R+EKIRTYNY NRVTDHR+ +L ++G +D+ + + A EQ++ L
Sbjct: 302 DRSEKIRTYNYPQNRVTDHRIGFTINQLDRIMEGKLDDVIAALLAEEQRQKL 353
>gi|388547180|ref|ZP_10150448.1| peptide chain release factor 1 [Pseudomonas sp. M47T1]
gi|388274755|gb|EIK94349.1| peptide chain release factor 1 [Pseudomonas sp. M47T1]
Length = 360
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 236/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ +++L+ L D E++S+ + ++ ++ AEL+ VV+ Y+++ + LE
Sbjct: 5 LLNKLDTIQDRFEELTALLGDGEIISDQTRFRAFSREYAELEPVVAGYQEWCKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L+ LE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEQLVVLEGNLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDERVAIEINPADLRVDTFRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG + C EER+Q +N++RA+ L AKL +++ I ++R VG+
Sbjct: 243 DSAIRITHLPTGTVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L + G +D ++ A Q + L L E
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVMAGGVDAVIEPLLAEYQADQLAALGE 360
>gi|379012358|ref|YP_005270170.1| peptide chain release factor RF-1 [Acetobacterium woodii DSM 1030]
gi|375303147|gb|AFA49281.1| peptide chain release factor RF-1 [Acetobacterium woodii DSM 1030]
Length = 356
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 253/354 (71%), Gaps = 1/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ A+ + +L+ K++DPE++ + ++++KL + A ++ ++ Y +F +++
Sbjct: 1 MLGKLDFLAEKYAELNEKISDPEIIGDQNQWKKLVKEHAHIEPIIQKYNEFSSTLSAIDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + ++ +++ EM +E+ L+ + I LEE+L+VLLLP D D +N+++E+RAGAG
Sbjct: 61 TKEMLEDKQLEKDFKEMAETELDELTKKKIALEEELRVLLLPKDANDDKNVIVEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA ++AGDL RM+ +Y+E+ WK ++SSS + GG K ++ I+G VYS+LKYESG
Sbjct: 121 GSEAALFAGDLFRMFTRYAERQGWKSEIMSSSIPDIGGIKEIIFAIEGTGVYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA++VE+ I D+ + RS G GGQ+VN +
Sbjct: 181 VHRVQRIPSTESGGRIHTSTATVAVLPEAEDVEIEIGANDLRVDVYRSSGNGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +AL++L+A+LYEI+ ++QQ +I R SQVGTG
Sbjct: 241 SAVRITHIPTGMVVTCQDEKSQLKNKDKALKILKARLYEIEQQKQQSEIAENRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+E+IRTYN+ R++DHR+ + ++L +FLDG+ID + + +Q E L++
Sbjct: 301 DRSERIRTYNFPQGRISDHRINVTVYQLEAFLDGDIDEMINALITNDQAEKLKQ 354
>gi|429335284|ref|ZP_19215921.1| peptide chain release factor 1 [Pseudomonas putida CSV86]
gi|428760086|gb|EKX82363.1| peptide chain release factor 1 [Pseudomonas putida CSV86]
Length = 360
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KLE +++L+ L D EV+S+ + ++ ++ AE++ V + Y +++ + LE
Sbjct: 5 LLKKLEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVAAGYVQWRKLQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L LE++L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMAIEEVREAKEQLQALEDQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGEAVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE V + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q + ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAMASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDEVLAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|408483921|ref|ZP_11190140.1| peptide chain release factor 1 [Pseudomonas sp. R81]
Length = 360
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 235/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ A+++ VV+TY+ + LE
Sbjct: 5 LLNKLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYADVEPVVATYKNLLKVQADLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ +L LE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKEKLAALEGDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G +D ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQADQLAAIGE 360
>gi|410471166|ref|YP_006894447.1| peptide chain release factor 1 [Bordetella parapertussis Bpp5]
gi|408441276|emb|CCJ47712.1| peptide chain release factor 1 [Bordetella parapertussis Bpp5]
Length = 360
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 238/362 (65%), Gaps = 6/362 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE A ++ LA+PE ++ + KL++ AEL+ VV + F E +
Sbjct: 3 PSMRSRLEQLAHRLIEVDALLAEPETAADMDRFCKLSRERAELEPVVEAFNAFLGVEADV 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
A A+E +D +M M EIK+ + E+E L++LLLP DP D R++ LE+RAG
Sbjct: 63 ----ATAQEMLSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ +++GDL+RMY +Y+E W+ ++S SE+E GG+K V+ I G+ Y +LK+E
Sbjct: 119 TGGDESALFSGDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TEAQGR+HTS TVA+MPEAD + ++VI+P D+ + T R+ GAGGQ++N
Sbjct: 179 SGAHRVQRVPATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++A+ + H PTG+ + C ++R+Q +NK +A+Q+L A+L + ++RE+Q K +R S +
Sbjct: 239 KTDSAVRITHVPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQSKEAAERKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYNY RVTDHR+ + ++L ++G++D + A Q E L L
Sbjct: 299 GSGDRSERIRTYNYPQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQAEQLAALGH 358
Query: 410 SV 411
+
Sbjct: 359 DL 360
>gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
gi|365162712|ref|ZP_09358837.1| peptide chain release factor 1 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410921|ref|ZP_17388041.1| peptide chain release factor 1 [Bacillus cereus BAG3O-2]
gi|423427420|ref|ZP_17404451.1| peptide chain release factor 1 [Bacillus cereus BAG3X2-2]
gi|423433294|ref|ZP_17410298.1| peptide chain release factor 1 [Bacillus cereus BAG4O-1]
gi|423438734|ref|ZP_17415715.1| peptide chain release factor 1 [Bacillus cereus BAG4X12-1]
gi|423506787|ref|ZP_17483376.1| peptide chain release factor 1 [Bacillus cereus HD73]
gi|423583501|ref|ZP_17559612.1| peptide chain release factor 1 [Bacillus cereus VD014]
gi|423589151|ref|ZP_17565237.1| peptide chain release factor 1 [Bacillus cereus VD045]
gi|423632650|ref|ZP_17608395.1| peptide chain release factor 1 [Bacillus cereus VD154]
gi|423633826|ref|ZP_17609479.1| peptide chain release factor 1 [Bacillus cereus VD156]
gi|423644492|ref|ZP_17620109.1| peptide chain release factor 1 [Bacillus cereus VD166]
gi|423651171|ref|ZP_17626741.1| peptide chain release factor 1 [Bacillus cereus VD169]
gi|423658245|ref|ZP_17633544.1| peptide chain release factor 1 [Bacillus cereus VD200]
gi|46576766|sp|Q812I4.2|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
gi|363617877|gb|EHL69247.1| peptide chain release factor 1 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108759|gb|EJQ16689.1| peptide chain release factor 1 [Bacillus cereus BAG3X2-2]
gi|401109259|gb|EJQ17185.1| peptide chain release factor 1 [Bacillus cereus BAG3O-2]
gi|401112345|gb|EJQ20224.1| peptide chain release factor 1 [Bacillus cereus BAG4O-1]
gi|401115861|gb|EJQ23707.1| peptide chain release factor 1 [Bacillus cereus BAG4X12-1]
gi|401209561|gb|EJR16320.1| peptide chain release factor 1 [Bacillus cereus VD014]
gi|401224390|gb|EJR30944.1| peptide chain release factor 1 [Bacillus cereus VD045]
gi|401259296|gb|EJR65472.1| peptide chain release factor 1 [Bacillus cereus VD154]
gi|401270616|gb|EJR76636.1| peptide chain release factor 1 [Bacillus cereus VD166]
gi|401279449|gb|EJR85375.1| peptide chain release factor 1 [Bacillus cereus VD169]
gi|401282426|gb|EJR88326.1| peptide chain release factor 1 [Bacillus cereus VD156]
gi|401287975|gb|EJR93737.1| peptide chain release factor 1 [Bacillus cereus VD200]
gi|402446285|gb|EJV78147.1| peptide chain release factor 1 [Bacillus cereus HD73]
Length = 355
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP ++S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|424924881|ref|ZP_18348242.1| peptide chain release factor 1 [Pseudomonas fluorescens R124]
gi|404306041|gb|EJZ60003.1| peptide chain release factor 1 [Pseudomonas fluorescens R124]
Length = 360
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ + ++ ++ AE++ VV+ Y+K + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDAEVISDQARFRAYSKEYAEVEPVVAAYKKLLGVQNDLES 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ LI LE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G ++ ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQADQLAAIGE 360
>gi|399543904|ref|YP_006557212.1| peptide chain release factor 1 [Marinobacter sp. BSs20148]
gi|399159236|gb|AFP29799.1| Peptide chain release factor 1 [Marinobacter sp. BSs20148]
Length = 362
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 245/360 (68%), Gaps = 4/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + ++LE + ++++S L+D V++N +++++L++ AE++ VV ++ ++ +
Sbjct: 3 PSIQSRLEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLVDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E+R L K+ D +M EM E+++ EL+ +L+ L+LP DP D +N+ LEVRAG
Sbjct: 63 NEARELCKDG--DADMREMAEEELRTAQQSSEELDAELQGLMLPKDPNDGKNVFLEVRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
AGGDEA I+AGDL RMY +++E+ W+ ++S+S+ E GG+K V+ + G+ VY LK+E
Sbjct: 121 AGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASDGEHGGYKEVIARVAGSGVYGTLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SGVHRVQRVP+TE+QGR+HTS TVA+MPEADE E V I+ D+ + T R+ GAGGQ+VN
Sbjct: 181 SGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K ++AI + H P+G+ + C EER+Q +N+++A+ LL ++L I+ + + R S V
Sbjct: 241 KTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKSLV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYN+ +RVTDHR+ + ++L + G++D+ ++ Q ELL LA+
Sbjct: 301 GSGDRSERIRTYNFPQSRVTDHRINLTLYKLDEVIAGDLDSVIKPLLQEHQAELLAALAD 360
>gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
700780]
gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
700780]
Length = 359
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 238/355 (67%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQTVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K +E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.]
Length = 363
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 241/361 (66%), Gaps = 4/361 (1%)
Query: 51 EPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQ 110
E + K+E A + +L + L+DP+ + + YQK + + L ++V+ YR +K+ +Q
Sbjct: 2 EGIMFEKIEGAEVRFMELEMLLSDPDTIRDREAYQKYVREHSALSKIVAIYRSYKNINEQ 61
Query: 111 LEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
+EES +L K D E+ E+ EI+ L+ + +LE++L++LL+P D D +N++LE+RA
Sbjct: 62 IEESISLLK--NEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRA 119
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GGDEA ++A DL RMY +Y+E +WK +++ S GG K +V I+G YS KY
Sbjct: 120 GTGGDEAALFATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKY 179
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESG HRVQRVP TEAQGR+HTS TVA++PEA+EVE+ IDP +I++ RS G GGQ+VN
Sbjct: 180 ESGTHRVQRVPVTEAQGRIHTSAVTVAVLPEAEEVELDIDPGEIKVDVYRSTGPGGQSVN 239
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
++A+ + H PTG+ + C +E++Q +NKS+A+++LRA+L + EQ +K +R Q+
Sbjct: 240 TTDSAVRITHLPTGLVVTCQDEKSQFKNKSKAMKVLRARLLDNITMEQNQKRSAERKHQI 299
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+E+IRTYN+ +RVTDHR+ + ++L L+GNID + + Q + L+ AE
Sbjct: 300 GSGDRSERIRTYNFPQSRVTDHRIGLTLYKLEYILEGNIDEIISELTSHYQAQALQH-AE 358
Query: 410 S 410
S
Sbjct: 359 S 359
>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
gi|189039985|sp|B0KNE4.1|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
Length = 360
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 237/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ + ++ ++ AE++ V + Y+++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D ++ EM E++ +L+ LE +L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K ++ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGRVHTS TVA++PE DE + I+P D+ + T R+ GAGGQ+VNK
Sbjct: 183 AHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTGI + C EER+Q +N++RA+ L AKL +++ Q I ++R VG+
Sbjct: 243 DSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYNY RVTDHR+ + + L L G ++ ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLAEYQADQLAALGD 360
>gi|339450797|ref|ZP_08654167.1| peptide chain release factor 1 [Leuconostoc lactis KCTC 3528]
Length = 357
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 232/355 (65%), Gaps = 5/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L++ + +L+ +LADPEV S+ +Y L++ E+ E V Y +++ ++++E
Sbjct: 4 IFQSLQTVVDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +D EMA + ++ L E +L+++LK+L+LP DP D +NI++E+R AG
Sbjct: 64 AEELL----DDAEMAPLAKEDLADLKPEKAQLKDQLKILMLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ W ++I S E GG+K V + I G+ VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAEKQRWTLSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE ++++ + D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPSTETQGRVHTSTATVGVMPEFEDIDFELAESDLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + QR S VGTG
Sbjct: 240 TAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAAYAEQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G + + + +Q L EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELGEVIDALIIADQTAKLAEL 354
>gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB]
gi|166977370|sp|A0LIZ8.1|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter
fumaroxidans MPOB]
Length = 355
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 231/352 (65%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +LES A+ ++ L L++PE+++N EYQK+A+ AE+ +V Y +K +QL +
Sbjct: 1 MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L E D EM E+ EI L ++ + E LK++L P DP D +N++LE+RAG G
Sbjct: 61 NQQLL-EQETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++ DL RMY +Y+E WK ++ S + GG K V+ + G YS+LK+E G
Sbjct: 120 GEEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFERG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGR+HTS TVA++PEA+EV+V IDP D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRVPVTESQGRIHTSAVTVAVLPEAEEVDVYIDPNDLRVDVFRSSGPGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++Q +NK++AL++LRA+L + EQ+ +I R SQVGTG
Sbjct: 240 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARLLDQMQSEQEARIARDRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ NRV+DHR+ + ++L L G +D + + Q E L
Sbjct: 300 DRSERIRTYNFPQNRVSDHRINLTLYKLDIILGGALDEIIDPLSTHFQAEAL 351
>gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L]
gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al
Hakam]
gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187]
gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820]
gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293]
gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066]
gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055]
gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western
North America USA6153]
gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B]
gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum]
gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia
94]
gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis
str. CI]
gi|376269243|ref|YP_005121955.1| Peptide chain release factor 1 [Bacillus cereus F837/76]
gi|384183194|ref|YP_005568956.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|386739187|ref|YP_006212368.1| Peptide chain release factor 1 [Bacillus anthracis str. H9401]
gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L]
gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus
thuringiensis str. Al Hakam]
gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187]
gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820]
gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293]
gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis
str. CI]
gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|364515043|gb|AEW58442.1| Peptide chain release factor 1 [Bacillus cereus F837/76]
gi|384389038|gb|AFH86699.1| Peptide chain release factor 1 [Bacillus anthracis str. H9401]
Length = 358
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP ++S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 355
>gi|359403155|ref|ZP_09196062.1| peptide chain release factor 1 [Spiroplasma melliferum KC3]
gi|357968372|gb|EHJ90881.1| peptide chain release factor 1 [Spiroplasma melliferum KC3]
Length = 358
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 232/348 (66%), Gaps = 2/348 (0%)
Query: 55 ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEES 114
I +LE+ K W ++ +L PE+V++ + LA+ A+L+E V+ Y +K+ + E+
Sbjct: 6 IERLETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLNNINEA 65
Query: 115 RALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGG 174
+ L E D E+ E+ E+K+ +L +LKV+LLP DP D +N++ E+R AGG
Sbjct: 66 K-LILETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGG 124
Query: 175 DEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGV 234
DE I+AGDL RMY KY+EQ WK LI ++E+E GGF T+ +KG+RVYSK+K+ESG
Sbjct: 125 DEGNIFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGA 184
Query: 235 HRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVET 294
HRVQR+P+TE++GRVHTSTATVA++PE +EV+ I D+++ T R+ GAGGQ+VN ++
Sbjct: 185 HRVQRIPKTESKGRVHTSTATVAVLPEIEEVDFEIKTADLKIDTYRASGAGGQHVNTTDS 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
A+ + H PTG+ + + R+Q NK+ A+Q LR+KLYE + R+ E+ T R VGTG
Sbjct: 245 AVRITHLPTGVVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERGTLRKDAVGTGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQK 401
R+EKIRTYNY NRVTDH + + + L ++GN+D V + EQ+
Sbjct: 305 RSEKIRTYNYPQNRVTDHLINLTLQKLDQIMEGNLDEIVVALINEEQR 352
>gi|445494095|ref|ZP_21461139.1| peptide chain release factor 1 [Janthinobacterium sp. HH01]
gi|444790256|gb|ELX11803.1| peptide chain release factor 1 [Janthinobacterium sp. HH01]
Length = 371
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 244/380 (64%), Gaps = 12/380 (3%)
Query: 32 RNVVFPSLSFRTPKLICMAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSM 91
R + F S + K P ++ KL+ A +L L +N Y+K+ +
Sbjct: 2 RGICFNSFTEYAMK------PSMLAKLDQLANRLVELDELLMSEGATNNMDAYRKMTREH 55
Query: 92 AELDEVVSTYRKFKDCEKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKV 151
AEL +V+ Y+ +++ L A A+E D EM + EI++ L ELE +L+
Sbjct: 56 AELGPLVALYKSYQEAIGDL----AAAQEMLGDPEMKDFAQDEIEAAKTRLAELELELQK 111
Query: 152 LLLPSDPLDARNIMLEVRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGG 211
+LLP D D RNI LE+RAG GGDE+ ++AGDL+RMY +++E+N W+ ++S S ++ GG
Sbjct: 112 MLLPKDANDERNIFLEIRAGTGGDESALFAGDLLRMYTRFAERNRWQVEVVSESASDLGG 171
Query: 212 FKTVVMEIKGNRVYSKLKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVE-VVID 270
++ V++ + GN VYSKLK+ESG HRVQRVP TE QGR+HTS TVA+MPEADEVE V I+
Sbjct: 172 YREVIVRLIGNSVYSKLKFESGGHRVQRVPATETQGRIHTSACTVAVMPEADEVEDVNIN 231
Query: 271 PKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKL 330
P D+ + T R+ GAGGQ++NK ++A+ + H PTGI + C ++R+Q +NK++A+++L ++
Sbjct: 232 PADLRIDTYRASGAGGQHINKTDSAVRITHLPTGIVVECQDDRSQHKNKAQAMRVLATRI 291
Query: 331 YEIKVREQQEKIRTQRLSQVGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNID 389
++++REQQ K R S +G+G R+E+IRTYNY R+TDHR+ + ++L +DG++
Sbjct: 292 KDVQLREQQSKEAATRKSLIGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDFIMDGDLT 351
Query: 390 NAVQSCAAMEQKELLEELAE 409
+ AA Q ELL L +
Sbjct: 352 ELTNALAAEHQAELLAALGD 371
>gi|421234007|ref|ZP_15690628.1| peptide chain release factor 1 [Streptococcus pneumoniae 2061617]
gi|421249316|ref|ZP_15705777.1| peptide chain release factor 1 [Streptococcus pneumoniae 2082239]
gi|395601763|gb|EJG61909.1| peptide chain release factor 1 [Streptococcus pneumoniae 2061617]
gi|395614428|gb|EJG74448.1| peptide chain release factor 1 [Streptococcus pneumoniae 2082239]
Length = 359
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVY 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
Length = 359
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 231/355 (65%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+S + L+ L+DP++VS+ ++ + ++ ++L E V TYR++KD QL E
Sbjct: 1 MFDRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E D +M EM+ E+ L ++ +EE+L LL+P DP D +N+++E+R AG
Sbjct: 61 AKAMFDEK-MDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +++E N WK ++ S+ GGFK +V I G YSK+KYE+G
Sbjct: 120 GDEAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA +PE +EVEV I DI T S GAGGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVACLPEVEEVEVDIHENDIRTDTYASSGAGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PT + C +E++Q++NK+ A+++LRA++YE +E Q + R S VGTG
Sbjct: 240 SAVRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVYEKFQQEAQAEYDAVRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L L G +D V + EQ +E L
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKMDEIVDALIVEEQSARMESL 354
>gi|423613469|ref|ZP_17589329.1| peptide chain release factor 1 [Bacillus cereus VD107]
gi|401241759|gb|EJR48139.1| peptide chain release factor 1 [Bacillus cereus VD107]
Length = 355
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ E V YR++KD +QL +
Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M +M+ E+ L + L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|414154192|ref|ZP_11410512.1| Peptide chain release factor 1 [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411454377|emb|CCO08416.1| Peptide chain release factor 1 [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 355
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 240/352 (68%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL++ + L +++DP V+++ + +Q+L +S +EL EVV +R++K + L++
Sbjct: 1 MLAKLQALEDKYLQLESQISDPAVMADRARWQQLVKSHSELGEVVDVFRRYKKARQDLQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + +E + + EM+ EI+ L +++ ELE+KLK+LLLP DP D +N+++E+R G G
Sbjct: 61 NKQMLEEK-LEPDFREMVELEIEELESKIEELEQKLKILLLPKDPNDEKNVIMEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +Y+E+ W+ +I ++E + GGFK V I+G YS LK+ESG
Sbjct: 120 GEEAALFAGDLFRMYCRYAEKKGWRTEVIDANETDLGGFKEVTFVIEGKGAYSTLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PEA+EV++ I+P D+ + + G GGQ VN +
Sbjct: 180 VHRVQRVPATESGGRIHTSAATVAVLPEAEEVDIEINPNDLRIDLFCASGPGGQCVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C +E++Q +NK +A+++LRA+L + EQQ+ I R S VG+G
Sbjct: 240 SAVRITHLPTGTVVSCQDEKSQHKNKEKAMRVLRARLLDKAQEEQQKAIAGARKSMVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ NRVTDHR+ + L S L G +D +++ +Q E L
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTLHRLESVLQGELDELIEALITTDQAERL 351
>gi|373496654|ref|ZP_09587200.1| peptide chain release factor 1 [Fusobacterium sp. 12_1B]
gi|404368527|ref|ZP_10973877.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185]
gi|313687822|gb|EFS24657.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185]
gi|371965543|gb|EHO83043.1| peptide chain release factor 1 [Fusobacterium sp. 12_1B]
Length = 358
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 249/361 (68%), Gaps = 9/361 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE K + +L+ L PEV+++P + + +S++E+ +V Y+++K ++ E
Sbjct: 1 MFGKLEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSEITPIVEKYKEYK----RVVE 56
Query: 114 SRALAKEN---GNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
KEN D++M EM+ E+K L + ELE++LKVLLLP D D +N+++E+R
Sbjct: 57 DFDFIKENLKTEKDQDMREMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRG 116
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGGDEA ++AG+L RMY +Y+E+ WK +I E GG K V I G YS+LK+
Sbjct: 117 GAGGDEAALFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVFSINGFGAYSRLKF 176
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNV 289
ESGVHRVQRVP+TE+ GRVHTSTATVA++PE ++V EV IDP+D+++ T RSGGAGGQ+V
Sbjct: 177 ESGVHRVQRVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHV 236
Query: 290 NKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
N ++A+ + H PTGI + C +ER+QL+N+ +A++ L +KL+E++ +Q+ ++ ++R Q
Sbjct: 237 NMTDSAVRITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQRSQVESERRLQ 296
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+EKIRTYNY R+TDHR+K ++L ++LDG++D + + Q E+L ++
Sbjct: 297 VGTGDRSEKIRTYNYPQGRITDHRIKFTVYQLEAYLDGDLDEMIDALITFSQAEMLSSVS 356
Query: 409 E 409
E
Sbjct: 357 E 357
>gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
12680]
gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
12680]
Length = 355
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 251/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL+ + +++++ L+ PEV+++ + +QK A++ AEL E+V TYR++K + +
Sbjct: 1 MLEKLDKLEEKFEEITALLSQPEVIADQARFQKYAKAHAELSELVDTYREYKRVRQDKTD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+RA+ +E D+++ M+ EI+ LS++ +LE++LK+LLLP DP D +N+++E+RAG G
Sbjct: 61 ARAMLEEE-EDDDLRNMLVEEIRVLSDKEEKLEQRLKLLLLPKDPNDEKNVIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ WK ++ +S ++ GGFK ++ ++G YSKLK+ESG
Sbjct: 120 GEEAALFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIVEGRGAYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTS ATVA++PEA+EVEV I+P D+ + S G GGQ+VN +
Sbjct: 180 VHRVQRIPVTESGGRIHTSAATVAVLPEAEEVEVDINPNDLRIDVFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++Q +NK +A+++LR++L E+K E + +I R SQVG+G
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRLLELKRAEHEAEIADARRSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RVTDHR+ + +L L+G +D +++ +Q E + ++
Sbjct: 300 DRSERIRTYNFPQGRVTDHRINLTLHKLDVVLEGELDEIIEALITHDQAEKMRQV 354
>gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
Length = 356
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 249/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL++ + + +L ++DPEV++ E++KL + + L EVV+ YR+++ E+ L E
Sbjct: 1 MFDKLKATEERFDELEKLISDPEVIARQDEWRKLTKEHSRLSEVVNAYREYQQVEQDLAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + + +G DEEM+ + EI + + + EL EKL++LLLP DP D +N+++EVRAG G
Sbjct: 61 AKEMLR-DGGDEEMSRFLKDEITANTEKKEELTEKLRLLLLPRDPNDDKNVIVEVRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK ++ ++E + GGFK VV I+G+ YS+LK+ESG
Sbjct: 120 GDEAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAIEGDGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTS ATVA++PEA++VEV I+ D+ + S G GGQ+VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSAATVAVLPEAEDVEVDINQNDLRIDVFCSSGPGGQSVNTTQ 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+GI + C +E++Q +NK +A+++LRA+L+E E + R +QVG+G
Sbjct: 240 SAVRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLFEKAQEEAAAEQAAARKTQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ RV+DHR+ M ++L FLDG++D V + EQ ELL+++
Sbjct: 300 DRSERIRTYNFPQGRVSDHRIGMTLYKLDQFLDGDLDEMVDALITSEQAELLKQV 354
>gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
substr. CH1]
gi|172046863|sp|P47850.2|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
substr. CH1]
Length = 359
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 237/352 (67%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG HR
Sbjct: 126 AQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQTQKLEEL 357
>gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes
bacterium SGP1]
Length = 357
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 235/354 (66%), Gaps = 3/354 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KL++ K + D+ ++ DP S+P Q L + A+L+ VV YR ++ + E+R
Sbjct: 6 KLQAIEKEFLDIEERMGDPATASDPRALQDLGKKRAQLEPVVEKYRAYRAAVASIAEARD 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
L K G D E+AE+ E+ L ++ E++L +LLLP DP D +++++E+RAG GGDE
Sbjct: 66 LLK--GGDPEIAELAREELSELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAGVGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++A DL RMY ++ E+ WK +I SS GG+K V+ I + YS +KYESG HR
Sbjct: 124 AALFAADLYRMYTRFCERQRWKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYESGGHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TEA GR+HTS+ATVA+MPE +++E+ I P+D+++ T RS GAGGQ+VN ++A+
Sbjct: 184 VQRVPVTEASGRIHTSSATVAVMPEVEDIEIEIRPEDLKVDTYRSSGAGGQHVNMTDSAV 243
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTGI C +ER+Q++N++RA+ L+A+LY ++ +Q + ++R +G+G R+
Sbjct: 244 RITHLPTGIVATCQDERSQIKNRARAMAYLKARLYALEQEKQNAEQASERRGMIGSGDRS 303
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
E+IRTYN+ NR+TDHR+ + ++L ++LDG++ + + EQ + LE L E
Sbjct: 304 ERIRTYNFPQNRITDHRINLTLYKLDNYLDGDLFEMIDAMILAEQTQKLEHLEE 357
>gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579]
gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134]
gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264]
gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676]
gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185]
gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550]
gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
gi|449092393|ref|YP_007424834.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus
ATCC 14579]
gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134]
gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264]
gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550]
gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185]
gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676]
gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|449026150|gb|AGE81313.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 358
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP ++S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM EM+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 355
>gi|414155519|ref|ZP_11411831.1| peptide chain release factor 1 [Streptococcus sp. F0442]
gi|410873492|gb|EKS21427.1| peptide chain release factor 1 [Streptococcus sp. F0442]
Length = 359
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQDWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|423070377|ref|ZP_17059153.1| peptide chain release factor 1 [Streptococcus intermedius F0413]
gi|355365738|gb|EHG13458.1| peptide chain release factor 1 [Streptococcus intermedius F0413]
Length = 359
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 235/352 (66%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVSN + +L++ A + V+ YR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSNTKRFMELSKEEASTRDTVAAYREYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDATGDADLEEMAKQELKDAKTEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEIMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +E+E IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEIEEIEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|387879534|ref|YP_006309837.1| Protein chain release factor A [Streptococcus parasanguinis FW213]
gi|386792987|gb|AFJ26022.1| Protein chain release factor A [Streptococcus parasanguinis FW213]
Length = 359
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDADLEEMAKQELKDAKTEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|359395824|ref|ZP_09188876.1| Peptide chain release factor 1 [Halomonas boliviensis LC1]
gi|357970089|gb|EHJ92536.1| Peptide chain release factor 1 [Halomonas boliviensis LC1]
Length = 362
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 242/359 (67%), Gaps = 5/359 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+S + +++LS+ L+DP+V++N ++ ++ AEL+E+V+ +++++D E + E
Sbjct: 5 LRQRLDSFTERFEELSMLLSDPDVINNQQRFRDYSREYAELEELVAAWQRYRDIETNMHE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L++++ D +M E+ E+ L EL+ +LK LL+P DP D R + LEVRAG G
Sbjct: 65 AEQLSRDS--DADMRELAEMELSEGRERLAELDIELKRLLVPKDPDDGRGVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ W+ ++S+S E+GG+K ++ +KG+ VY++LK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAEKRGWRVEVVSASHGEQGGYKEIISRVKGDGVYAQLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+MPE D+V ++ I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINPADLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG+ + C EER+Q +N+++A+ LL AKL V Q++ R S VG+
Sbjct: 243 DSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQTQADARRSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDG-NIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ R+TDHR+ + ++L + G +D+ + Q E L L +
Sbjct: 303 GDRSERIRTYNFPQGRITDHRINLTLYKLNEVVSGEQLDDVISPLIHEYQAEQLSALQD 361
>gi|418189257|ref|ZP_12825772.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47373]
gi|419495434|ref|ZP_14035152.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47461]
gi|421303232|ref|ZP_15753896.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17484]
gi|353856399|gb|EHE36368.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47373]
gi|379595516|gb|EHZ60324.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47461]
gi|395901854|gb|EJH12790.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17484]
Length = 359
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + L+EL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLKEL 357
>gi|392428749|ref|YP_006469760.1| protein chain release factor A [Streptococcus intermedius JTH08]
gi|419776390|ref|ZP_14302312.1| peptide chain release factor 1 [Streptococcus intermedius SK54]
gi|424787741|ref|ZP_18214505.1| peptide chain release factor 1 [Streptococcus intermedius BA1]
gi|383845801|gb|EID83201.1| peptide chain release factor 1 [Streptococcus intermedius SK54]
gi|391757895|dbj|BAM23512.1| protein chain release factor A [Streptococcus intermedius JTH08]
gi|422113495|gb|EKU17233.1| peptide chain release factor 1 [Streptococcus intermedius BA1]
Length = 359
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/352 (45%), Positives = 235/352 (66%), Gaps = 1/352 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
+L++ +++L L+DP+VVSN + +L++ A + V+ YR++K + + ++
Sbjct: 6 QLQAVEDRYEELGELLSDPDVVSNTKRFMELSKEEASTRDTVAAYREYKRVLQNITDAEE 65
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ K+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AGGDE
Sbjct: 66 MIKDATGDADLEEMAKQELKDAKTEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDE 125
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+ MYQKY+E WK ++ +S GGFK VV + G VYSKLKYESG HR
Sbjct: 126 ASLFAGDLLTMYQKYAESQGWKFEIMEASMNGVGGFKEVVAMVSGQAVYSKLKYESGAHR 185
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP TE+QGRVHTSTATV +MPE +E+E IDPKD+ + + GAGGQNVNKV TA+
Sbjct: 186 VQRVPVTESQGRVHTSTATVLVMPEIEEIEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG R+
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTIGTGDRS 305
Query: 357 EKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 306 ERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQTQKLEEL 357
>gi|302392966|ref|YP_003828786.1| peptide chain release factor 1 (bRF-1) [Acetohalobium arabaticum
DSM 5501]
gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
arabaticum DSM 5501]
Length = 359
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 249/353 (70%), Gaps = 6/353 (1%)
Query: 58 LESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRAL 117
L+ A ++ L L+DPEV++N S++QKL++ AEL ++V YRK+K+ ++EE++ L
Sbjct: 8 LDDAEARYEKLQKMLSDPEVINNQSKFQKLSKEHAELKKLVKKYRKYKEIMAEIEEAKEL 67
Query: 118 AKENGNDE--EMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
+ ++E E+A+M E+ L + +LEE+L ++L+P DP D +N+++E+RAG GGD
Sbjct: 68 LEMEDDEEAVELAKM---ELAELEPKQEKLEEELPLMLIPEDPNDEKNVIVEIRAGTGGD 124
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA ++AG+L RMY +Y+E+ W ++SSS +E GGFK ++ ++G YS+LKYESGVH
Sbjct: 125 EAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVVEGKGAYSRLKYESGVH 184
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETA 295
RVQRVP+TE+ GR+HTSTATVA++PEA++V++ I+ D+ + T RS G GGQ+VN ++A
Sbjct: 185 RVQRVPETESSGRIHTSTATVAVLPEAEDVDIEINQNDLTIETYRSSGPGGQSVNTTDSA 244
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+ + H+PTG+ + C +E++Q +NK +A+++LR+++ E E+Q + +R Q+G+G R
Sbjct: 245 VRITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRIQEKIEAEKQAEEAEKRKMQIGSGGR 304
Query: 356 AEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
+E+IRTYN+ R+TDHR+ + ++ S LDG ID V +Q E LE++
Sbjct: 305 SERIRTYNFPQGRITDHRINLTTHQMESILDGEIDELVDELVTADQTEKLEQM 357
>gi|423369293|ref|ZP_17346724.1| peptide chain release factor 1 [Bacillus cereus VD142]
gi|401078178|gb|EJP86496.1| peptide chain release factor 1 [Bacillus cereus VD142]
Length = 355
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 240/353 (67%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DPEV+S+ ++ ++ ++ +++ + V YR++KD +QL +
Sbjct: 1 MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D EM +M+ E+ L + L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 61 AKAML-EDKLDAEMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQKME 352
>gi|404399170|ref|ZP_10990754.1| peptide chain release factor 1 [Pseudomonas fuscovaginae UPB0736]
Length = 360
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 234/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V+ Y + + LE
Sbjct: 5 LLKKLDILQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVAAYLQVLKVQSDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E + +L+ELE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEAREAKEQLVELESSLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S SE E GG+K V+ ++G VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAEKRGWRVEILSESEGEHGGYKEVIARVEGESVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L + G +D ++ A Q + L L +
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRVNLTLYSLDEIMAGGVDAVIEPLLAEYQADQLAALGD 360
>gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
903]
gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
903]
Length = 359
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
gi|404397646|ref|ZP_10989436.1| peptide chain release factor 1 [Ralstonia sp. 5_2_56FAA]
gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
gi|348612583|gb|EGY62197.1| peptide chain release factor 1 [Ralstonia sp. 5_2_56FAA]
Length = 360
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 240/360 (66%), Gaps = 6/360 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P +++KL+ A+ +++ LA + +N +Y+KL + AEL+ VV+ + +K Q
Sbjct: 3 PSMLSKLDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWK----QA 58
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
EE A A+E D +M E+++ + LE +L+ LLLP DP D RNI +E+RAG
Sbjct: 59 EEDIATAQELAADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAG 118
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDE+ ++AGDL+RMY +Y+E+ W+ ++S S ++ GG+K V+ + G YS+LK+E
Sbjct: 119 TGGDESALFAGDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFE 178
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TEAQGR+HTS TVAIMPEAD + ++ I+P D+ + T R+ GAGGQ++N
Sbjct: 179 SGGHRVQRVPATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHIN 238
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
K E+A+ + H PTG+ + C ++R+Q +NK RA+Q+L A+L + + RE Q K + R S +
Sbjct: 239 KTESAVRITHLPTGLVVECQDDRSQHRNKDRAMQVLAARLKDRQEREAQAKEASARKSLI 298
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G+G R+++IRTYN+ RVTDHR+ + +++ + +DG+ID V + AA Q E L L E
Sbjct: 299 GSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQAEQLAALGE 358
>gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
gi|238687991|sp|B0TI71.1|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
Length = 354
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 232/325 (71%), Gaps = 2/325 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE + + +L+ L+DPE++ + + +Q+ A+ A + E+V T+R +K + +++
Sbjct: 1 MIDKLEIIEQKYDELTQLLSDPEIIQDQTRWQRHAKQQAGMTEIVDTFRAYKGVLQGIDD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+RA+ E+ D E+ EM + E+ L ELE++LKVLLLP DP D +N+++E+RAG G
Sbjct: 61 ARAMLAES--DPELQEMASLELDELLARKEELEQRLKVLLLPKDPNDDKNVIIEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMY +++++ W+ L+S++ + GGFK V++ I+G +SKLK+ESG
Sbjct: 119 GEEAALFAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLIEGQGAFSKLKFESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTS ATVA++PEA+EVE+ ++P ++ + S GAGGQ+VNK E
Sbjct: 179 VHRVQRVPATESSGRIHTSAATVAVLPEAEEVEIEVNPNELRIDVFCSSGAGGQHVNKTE 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+N+ +A+++LRA+L E EQ ++ + R S VG+G
Sbjct: 239 SAVRITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLLEKAREEQHGEMASARKSMVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF 378
R+E+IRTYN+ RVTDHR+ +
Sbjct: 299 DRSERIRTYNFPQGRVTDHRIGLTL 323
>gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae
CDC1873-00]
gi|387757397|ref|YP_006064376.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141]
gi|417698564|ref|ZP_12347736.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317]
gi|418102875|ref|ZP_12739949.1| peptide chain release factor 1 [Streptococcus pneumoniae NP070]
gi|418162073|ref|ZP_12798760.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17328]
gi|418175838|ref|ZP_12812435.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41437]
gi|418218764|ref|ZP_12845431.1| peptide chain release factor 1 [Streptococcus pneumoniae NP127]
gi|418232087|ref|ZP_12858674.1| peptide chain release factor 1 [Streptococcus pneumoniae GA07228]
gi|418236527|ref|ZP_12863095.1| peptide chain release factor 1 [Streptococcus pneumoniae GA19690]
gi|418238592|ref|ZP_12865147.1| peptide chain release factor 1 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419442506|ref|ZP_13982537.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13224]
gi|419453178|ref|ZP_13993151.1| peptide chain release factor 1 [Streptococcus pneumoniae EU-NP03]
gi|419459863|ref|ZP_13999796.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02270]
gi|419462181|ref|ZP_14002091.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02714]
gi|419475413|ref|ZP_14015253.1| peptide chain release factor 1 [Streptococcus pneumoniae GA14688]
gi|419479846|ref|ZP_14019653.1| peptide chain release factor 1 [Streptococcus pneumoniae GA19101]
gi|419486570|ref|ZP_14026335.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44128]
gi|419499540|ref|ZP_14039237.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47597]
gi|419505952|ref|ZP_14045613.1| peptide chain release factor 1 [Streptococcus pneumoniae GA49194]
gi|419525768|ref|ZP_14065331.1| peptide chain release factor 1 [Streptococcus pneumoniae GA14373]
gi|421206475|ref|ZP_15663535.1| peptide chain release factor 1 [Streptococcus pneumoniae 2090008]
gi|421208841|ref|ZP_15665862.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070005]
gi|421224890|ref|ZP_15681633.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070768]
gi|421229667|ref|ZP_15686338.1| peptide chain release factor 1 [Streptococcus pneumoniae 2061376]
gi|421240577|ref|ZP_15697123.1| peptide chain release factor 1 [Streptococcus pneumoniae 2080913]
gi|421291893|ref|ZP_15742631.1| peptide chain release factor 1 [Streptococcus pneumoniae GA56348]
gi|421298482|ref|ZP_15749170.1| peptide chain release factor 1 [Streptococcus pneumoniae GA60080]
gi|421311828|ref|ZP_15762433.1| peptide chain release factor 1 [Streptococcus pneumoniae GA58981]
gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae
CDC1873-00]
gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141]
gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317]
gi|353775508|gb|EHD55988.1| peptide chain release factor 1 [Streptococcus pneumoniae NP070]
gi|353828456|gb|EHE08596.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17328]
gi|353842406|gb|EHE22453.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41437]
gi|353875419|gb|EHE55271.1| peptide chain release factor 1 [Streptococcus pneumoniae NP127]
gi|353886814|gb|EHE66594.1| peptide chain release factor 1 [Streptococcus pneumoniae GA07228]
gi|353892759|gb|EHE72507.1| peptide chain release factor 1 [Streptococcus pneumoniae GA19690]
gi|353894342|gb|EHE74084.1| peptide chain release factor 1 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379532889|gb|EHY98113.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02270]
gi|379533027|gb|EHY98250.1| peptide chain release factor 1 [Streptococcus pneumoniae GA02714]
gi|379554473|gb|EHZ19553.1| peptide chain release factor 1 [Streptococcus pneumoniae GA13224]
gi|379558461|gb|EHZ23495.1| peptide chain release factor 1 [Streptococcus pneumoniae GA14373]
gi|379560958|gb|EHZ25979.1| peptide chain release factor 1 [Streptococcus pneumoniae GA14688]
gi|379571012|gb|EHZ35971.1| peptide chain release factor 1 [Streptococcus pneumoniae GA19101]
gi|379587203|gb|EHZ52052.1| peptide chain release factor 1 [Streptococcus pneumoniae GA44128]
gi|379601310|gb|EHZ66085.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47597]
gi|379607866|gb|EHZ72612.1| peptide chain release factor 1 [Streptococcus pneumoniae GA49194]
gi|379626887|gb|EHZ91503.1| peptide chain release factor 1 [Streptococcus pneumoniae EU-NP03]
gi|395575179|gb|EJG35749.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070005]
gi|395576114|gb|EJG36672.1| peptide chain release factor 1 [Streptococcus pneumoniae 2090008]
gi|395590368|gb|EJG50675.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070768]
gi|395596075|gb|EJG56298.1| peptide chain release factor 1 [Streptococcus pneumoniae 2061376]
gi|395608368|gb|EJG68462.1| peptide chain release factor 1 [Streptococcus pneumoniae 2080913]
gi|395894110|gb|EJH05091.1| peptide chain release factor 1 [Streptococcus pneumoniae GA56348]
gi|395902438|gb|EJH13371.1| peptide chain release factor 1 [Streptococcus pneumoniae GA60080]
gi|395911217|gb|EJH22085.1| peptide chain release factor 1 [Streptococcus pneumoniae GA58981]
gi|429316022|emb|CCP35675.1| peptide chain release factor 1 [Streptococcus pneumoniae SPN034156]
gi|429319366|emb|CCP32628.1| peptide chain release factor 1 [Streptococcus pneumoniae SPN034183]
gi|429321182|emb|CCP34602.1| peptide chain release factor 1 [Streptococcus pneumoniae SPN994039]
gi|429323002|emb|CCP30643.1| peptide chain release factor 1 [Streptococcus pneumoniae SPN994038]
Length = 359
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ E+ E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
10507]
gi|225037724|gb|EEG47970.1| peptide chain release factor 1 [Blautia hydrogenotrophica DSM
10507]
Length = 357
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 242/355 (68%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE ++++ +L +P V N +QKL + +EL +V TY+++K+ ++ +++
Sbjct: 1 MFDKLEDLLIRFEEVLSELGEPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S ++ +E +DEEM EM+ E+ + ELE +LK+LLLP DP D++N+++E+RAGAG
Sbjct: 61 SVSMLEEE-SDEEMREMLKEELSDAKRRVGELENELKILLLPKDPNDSKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY KY+E WK ++S +E GGFK V I+G YS+LKYESG
Sbjct: 120 GDEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVAIMPEA+E++ +D D + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAIMPEAEEIDFHLDLNDCKFDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I C +E++QL+NK +AL++LR++LYE+++++Q + R SQVGTG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELQKQHDAEAEARRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+EKIRTYN+ RVTDHR+K+ L L+G++D + S A +Q L L
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHRLEGTLNGDLDEVIDSLIAADQAAKLSNL 354
>gi|407803832|ref|ZP_11150664.1| peptide chain release factor 1 [Alcanivorax sp. W11-5]
gi|407022242|gb|EKE33997.1| peptide chain release factor 1 [Alcanivorax sp. W11-5]
Length = 362
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 233/346 (67%), Gaps = 4/346 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KLE + ++L+ LA PEV+S ++ L++ AEL++VVS + + C Q +
Sbjct: 5 LKHKLERLVERHQELAGLLATPEVISEQGRFRDLSREYAELEDVVSCFNDY--CRTQEDL 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A A + ND ++ EM EI+ EL + L+ L+LP DP D N+ LE+RAG G
Sbjct: 63 AAARAMQQDNDPDVREMAGEEIRDAEARADELAQTLQRLMLPRDPRDGSNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL+RMY +Y+++ W+ +IS+ E E GGFK V+ + G+ VYS+LK+ESG
Sbjct: 123 GDEAAIFAGDLLRMYSRYADRTGWRVEIISAHEGEHGGFKEVICRVAGDGVYSRLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+M EA+E+ EVVI +D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMAEAEEIGEVVIRTEDLRIDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H P+G+ + C EER+Q +NK++A+ L+A+LY+ ++QQ+++ R S VG+
Sbjct: 243 DSAVRITHLPSGLVVECQEERSQHKNKAKAMSWLKARLYDSMQQKQQQEMAATRKSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAA 397
G R+E+IRTYN+ R+TDHR+ + + L ++G++D + + A
Sbjct: 303 GDRSERIRTYNFPQGRLTDHRINLTLYRLGEVMEGDLDEVIGALLA 348
>gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae
Hungary19A-6]
gi|238688292|sp|B1IBH9.1|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae
Hungary19A-6]
Length = 359
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTRRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D + + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVMDALVLYDQTQKLEEL 357
>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
gi|345891915|ref|ZP_08842743.1| peptide chain release factor 1 [Desulfovibrio sp. 6_1_46AFAA]
gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
gi|345047775|gb|EGW51634.1| peptide chain release factor 1 [Desulfovibrio sp. 6_1_46AFAA]
Length = 356
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 236/357 (66%), Gaps = 3/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLE K + +L LA P+V ++ Y+KL ++ A+L E+V +R+ + ++++ E
Sbjct: 1 MFAKLEGLEKKYMELEEALAQPDVFNDQEHYRKLTKAHADLREIVDLFRRHRALQQEMAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + D ++ +M EI+ +EL +E+ LKV LLP+DPLD +N +LE+RAG G
Sbjct: 61 NKQLLHDE--DPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNTILEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E WK ++S S +E GG+K ++ I G+RVYS+LK+E+G
Sbjct: 119 GEEAALFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRVYSRLKFEAG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGR+HTS ATVA+MPEA+EV+V I P+D+ + R+ GAGGQ+VNK E
Sbjct: 179 THRVQRVPATETQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTE 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PT + C +ER+Q +NK+RA+++L +++ + Q ++ R +QVG+G
Sbjct: 239 SAVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSADRKAQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ R TDHR+ + + L ++G + + + Q E L+ AE
Sbjct: 299 DRSERIRTYNFPQGRCTDHRINLTLYSLDRIMEGELTPLFDALSTAAQTEALKAQAE 355
>gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773]
Length = 357
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 231/355 (65%), Gaps = 5/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L++ + +L+ +LADPEV S+ +Y L++ E+ E V Y +++ ++++E
Sbjct: 4 IFQSLQTVVDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L +D EMA + ++ L E +LE++LK+L+LP DP D +NI++E+R G
Sbjct: 64 AEELL----DDAEMAPLAKEDLADLKPEKAQLEDQLKILMLPKDPNDDKNIIMEIRGAVG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ W ++I S E GG+K V + I G+ VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE ++++ + D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPSTETQGRVHTSTATVGVMPEFEDIDFELAESDLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + QR S VGTG
Sbjct: 240 TAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAAYAEQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYNY NRVTDHR+ + +L ++G + + + +Q L EL
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELGEVIDALIIADQTAKLAEL 354
>gi|385262428|ref|ZP_10040532.1| peptide chain release factor 1 [Streptococcus sp. SK643]
gi|385190329|gb|EIF37776.1| peptide chain release factor 1 [Streptococcus sp. SK643]
Length = 359
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ + + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+ D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESSGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|398952330|ref|ZP_10674719.1| peptide chain release factor 1 [Pseudomonas sp. GM33]
gi|426411475|ref|YP_007031574.1| peptide chain release factor 1 [Pseudomonas sp. UW4]
gi|398155258|gb|EJM43708.1| peptide chain release factor 1 [Pseudomonas sp. GM33]
gi|426269692|gb|AFY21769.1| peptide chain release factor 1 [Pseudomonas sp. UW4]
Length = 360
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 235/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL+ +++L+ L D EV+S+ ++++ ++ AE++ +V TY++ + LE
Sbjct: 5 LLNKLDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVGTYKELLKVQDDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ L+ LE L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKERLVTLEADLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ ++G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VNK
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H P+GI + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G ++ ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQADQLAAIGE 360
>gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
29176]
gi|197299511|gb|EDY34030.1| peptide chain release factor 1 [Ruminococcus lactaris ATCC 29176]
Length = 356
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 246/357 (68%), Gaps = 2/357 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ ++++ +L +P+V ++P +++L + ++L +V Y+++K+C++ +EE
Sbjct: 1 MFDRLDDLLIRYEEVMGELQEPDVANDPERFRRLMKEQSDLAPIVEAYKEYKNCKQNIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S L +E + EEM E+ E+ + ELE++LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 SLQLLEEESD-EEMRELAKEELSGSRARIEELEQELKILLLPKDPNDDKNVIVEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++ RMY Y++ WK +IS +E GGFK V + G YS++KYESG
Sbjct: 120 GDEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMVTGQGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP+TE+ GR+HTST TVA+MPEA+EV+VVID KDI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPETESGGRIHTSTITVAVMPEAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTGI I+ E++QLQNK +A +LLR+KLY++++ +QQ +R SQ+GTG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQASEAAERRSQIGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN+ RVTDHR+K+ +L S L+G++D + S A +Q L ++ E
Sbjct: 300 DRSEKIRTYNFPQGRVTDHRIKLTLHKLDSILNGDLDEIIDSLIAADQTAKLAKMEE 356
>gi|417917573|ref|ZP_12561132.1| peptide chain release factor 1 [Streptococcus parasanguinis SK236]
gi|342830210|gb|EGU64549.1| peptide chain release factor 1 [Streptococcus parasanguinis SK236]
Length = 359
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 236/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
Length = 360
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 235/355 (66%), Gaps = 6/355 (1%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
KLE A ++L LA E + + +++L++ AE++ VV+ YR+ + E A
Sbjct: 8 KLEHLANRLEELDRTLASEEGARDMNAFRELSRERAEIEPVVALYREHRLAEADC----A 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
A+E D EM E+ E+ + LE +L+ LLP DP DARN+ LE+RAG GGDE
Sbjct: 64 TARELLADPEMRELGELELAEGEARIEALEAELQRALLPRDPNDARNLFLEIRAGTGGDE 123
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A ++AGDL+RMY +Y+E+ WK ++S+SE++ GG+K V+ + GN YSKLK+ESG HR
Sbjct: 124 AALFAGDLLRMYTRYAERQRWKVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESGGHR 183
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKVETA 295
VQRVP TE QGR+HTS TVA++PEADEVE V I+P D+ + T R+ GAGGQ++NK ++A
Sbjct: 184 VQRVPVTETQGRIHTSACTVAVLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSA 243
Query: 296 IDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGAR 355
+ + H PTGI + C ++R+Q +NK++A+ +L A+LY+ +VR QQ QR S VG+G R
Sbjct: 244 VRITHIPTGIVVECQDDRSQHRNKAQAMAVLAARLYDARVRAQQSAEAAQRKSLVGSGDR 303
Query: 356 AEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
+E+IRTYN+ RVTDHR+ + ++L + + G +D V + Q +LL L E
Sbjct: 304 SERIRTYNFPQGRVTDHRINLTLYKLDAVMQGELDEIVDALTLEHQADLLAALGE 358
>gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
Length = 359
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 250/359 (69%), Gaps = 3/359 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ K ++L+ L DP V S+P + + +++ +++VV Y+ +KD +++L
Sbjct: 1 MFQKLDDVVKKHEELTQLLMDPVVTSDPKKIMEYNKALNSINDVVEKYKYYKDKKEELAS 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ K N D EM EMI EIK++ E+ +EE+LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 LKEDLK-NEKDNEMKEMILEEIKNVEEEIPNIEEELKILLLPQDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A D+ RM+ +Y+E+N WK +I ++ GG K +V IKG YSKLKYESG
Sbjct: 120 GDEAALFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLIKGKGAYSKLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
VHRVQRVP TE+ GR+HTST TVA++PE D+V +V I+P D+++ T R+ GAGGQ+VN
Sbjct: 180 VHRVQRVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDTYRASGAGGQHVNTT 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTGI + +ER+QL+N+ RA+++L +K+YE++V EQ++ + ++R QVG+
Sbjct: 240 DSAVRITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEVEEQRKTVESERRLQVGS 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
G R+EKIRTYN+ RVTDHR+K+ +L LDG++ + + A Q ELL+ + E+
Sbjct: 300 GDRSEKIRTYNFPQGRVTDHRIKLTLHKLDQVLDGDLVELIDALTAYAQAELLKAVGEN 358
>gi|418184846|ref|ZP_12821393.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47283]
gi|419510646|ref|ZP_14050289.1| peptide chain release factor 1 [Streptococcus pneumoniae NP141]
gi|419530287|ref|ZP_14069816.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40028]
gi|421212884|ref|ZP_15669845.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070108]
gi|421215251|ref|ZP_15672179.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070109]
gi|353851382|gb|EHE31378.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47283]
gi|379573806|gb|EHZ38753.1| peptide chain release factor 1 [Streptococcus pneumoniae GA40028]
gi|379632699|gb|EHZ97271.1| peptide chain release factor 1 [Streptococcus pneumoniae NP141]
gi|395580471|gb|EJG40952.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070108]
gi|395581384|gb|EJG41856.1| peptide chain release factor 1 [Streptococcus pneumoniae 2070109]
Length = 359
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP+VVS+ + +L++ A + V YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE+G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL+ MYQKY+E W+ ++ +S GGFK VV + G VYSKLKYESG
Sbjct: 123 GDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV ++PE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVIPEVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|374620511|ref|ZP_09693045.1| bacterial peptide chain release factor 1 (bRF-1) [gamma
proteobacterium HIMB55]
gi|374303738|gb|EHQ57922.1| bacterial peptide chain release factor 1 (bRF-1) [gamma
proteobacterium HIMB55]
Length = 361
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 233/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+TKLES + +++S LAD E S+P++++ L+Q A+LDEVV Y ++ + LEE
Sbjct: 5 LVTKLESLSDRHEEVSALLADAETASDPNKFRTLSQEYAQLDEVVKVYDGYRRAQDDLEE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+R + ++ D ++ EM E+ + + + E L++L+LP DP D N+ LE+RAG G
Sbjct: 65 ARLMLTDS--DPDVREMAEEEVTTAESFMATAEADLQILMLPKDPKDKSNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E W +IS E GG+K ++ + G VY+ LK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAESKRWAIEVISERAGEHGGYKEIITRVAGESVYAHLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA+M E DEV E+ I +D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVMAEPDEVEEIEIRKEDLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ L H PTGI + C +ER+Q +N++RA+ LL+AKL ++ + +R + VGT
Sbjct: 243 DSAVRLTHIPTGIVVECQDERSQHKNRARAMSLLQAKLASASEQQLAAEQAEERRNLVGT 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+++IRTYNY RVTDHR+ + ++L + G++D VQ Q +LL L +
Sbjct: 303 GDRSDRIRTYNYPQGRVTDHRINLTLYKLDEVVQGDLDAVVQPLRQEHQADLLAALGD 360
>gi|338536127|ref|YP_004669461.1| peptide chain release factor 1 [Myxococcus fulvus HW-1]
gi|337262223|gb|AEI68383.1| peptide chain release factor 1 [Myxococcus fulvus HW-1]
Length = 362
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 241/366 (65%), Gaps = 13/366 (3%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE + ++ L+ L++P+V+++ + QK+++ A L+++V +R ++ L+E
Sbjct: 1 MIDKLEDVERRFERLTADLSNPDVLADSARLQKVSKERASLEKLVEAFRTYRKVLADLDE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
G D + + L + ELE LK+LLLP DP D +N++LE+RAGAG
Sbjct: 61 VETWL--GGGDADEKAFAREALPGLKQQREELEASLKILLLPKDPNDEKNVILEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++++MY +Y+++ WK ++ S GG K + + G+ V+S +KYESG
Sbjct: 119 GDEAALFAEEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGR+HTST TV++MPEA++V+V I+P DIE+ RS G+GGQ+VN +
Sbjct: 179 VHRVQRVPATETQGRIHTSTITVSVMPEAEDVDVHINPADIEMQVMRSTGSGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS----Q 349
+A+ L H PTGI + C +E++QL+N++ A+++LRAKLYEI +QE+IR +R S Q
Sbjct: 239 SAVRLIHHPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYEI----EQERIRNERDSARRAQ 294
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+EKIRTYN+ +R+TDHR+ + L + G+++ + +C Q E L+ A
Sbjct: 295 VGTGDRSEKIRTYNFPQDRLTDHRISLTVHNLPGVMAGDVEEVITACRTYYQAEALK--A 352
Query: 409 ESVGAP 414
++ G P
Sbjct: 353 QTAGGP 358
>gi|406915166|gb|EKD54274.1| hypothetical protein ACD_60C00100G0011 [uncultured bacterium]
Length = 360
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 243/361 (67%), Gaps = 6/361 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P + KL+S + +++L+ LADP V+ + ++ ++ AEL VV +++F+ C + +
Sbjct: 3 PSIEKKLQSLTERFEELNALLADPHVIQQQNRFRDYSKEYAELRPVVDVFQRFQTCLQDI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
++ L KE D+E+ E+ E+K+ LE +L++LLLP DP D NI LE+RAG
Sbjct: 63 AGAKELLKEE--DKELQELAKQELKNAEELQNSLEHELQILLLPRDPHDDSNIFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
AGGDEA I+AGDL RMY +Y+E W+ LIS + +E+GG+K +++ I G YS+ K+E
Sbjct: 121 AGGDEAAIFAGDLSRMYTRYAETQGWQVELISRNASEQGGYKEIILRIIGQGAYSRFKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SGVHRVQRVP+TEAQGR+HTST T+A+MPE DEVE + I+P+D+ + T R+ GAGGQ+V
Sbjct: 181 SGVHRVQRVPETEAQGRIHTSTCTIAVMPEVDEVEAIDINPQDLRIDTFRASGAGGQHVQ 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSR-ALQLLRAKLYEIKVREQQEKIRTQRLSQ 349
K ++AI + H P+G + C +ER+Q +N++R L L E + ++QQ++ T+R
Sbjct: 241 KTDSAIRITHIPSGTVVECQDERSQHKNRARALSLLKAKLLAEERNKQQQQQAETRR-HL 299
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+E+IRTYN+ R+TDHR+ + ++L + ++G++D +Q+ Q +LL +L
Sbjct: 300 VGTGDRSERIRTYNFPQGRLTDHRINLTLYQLPAIMNGDLDEIIQALIHEHQTDLLSQLG 359
Query: 409 E 409
+
Sbjct: 360 D 360
>gi|373493931|ref|ZP_09584537.1| peptide chain release factor 1 [Eubacterium infirmum F0142]
gi|371969065|gb|EHO86516.1| peptide chain release factor 1 [Eubacterium infirmum F0142]
Length = 354
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 245/353 (69%), Gaps = 8/353 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+ + +KD+S+K++DP+V+++ +Q+ + M E++ +V Y ++K +++L
Sbjct: 1 MFDKLDFIVEKYKDMSLKVSDPDVIADQPTWQRYIKDMGEMEPIVKKYEEYKKAKEEL-- 58
Query: 114 SRALAKE---NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
A+AKE NDEE+ ++ E+ ++ L E+L++LL+P DP D +N++LEVRA
Sbjct: 59 --AMAKEILETENDEELRDLAKLEVNDNEEKIEGLSEELRILLIPKDPNDDKNVILEVRA 116
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
G GG+EA ++ +L+RMY +Y+E++ WK +I ++ GG K VM IKG YS+LKY
Sbjct: 117 GTGGEEAALFGQNLLRMYTRYAERHRWKTEIIEINDTGMGGIKEAVMLIKGKGAYSRLKY 176
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
ESGVHRVQRVP+TE+ GR+HTS ATVA++PE ++V+V +DP D+ + R+ G GGQ VN
Sbjct: 177 ESGVHRVQRVPETESSGRIHTSAATVAVLPEVEDVDVALDPNDVRVDVYRASGNGGQCVN 236
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
++A+ L H PTG+ + C +E++Q++NK +A ++L+++LY++K++EQQ +I +R SQ+
Sbjct: 237 TTDSAVRLTHVPTGLVVTCQDEKSQIKNKEKAFKVLKSRLYDLKLQEQQSEIAAERRSQI 296
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
G+G R+E+IRTYN+ R T+HR+ M ++L + LDG+ID + +Q E
Sbjct: 297 GSGDRSERIRTYNFPQGRCTEHRIGMTLYKLDAILDGDIDEIIDGLITNDQAE 349
>gi|373458107|ref|ZP_09549874.1| Peptide chain release factor 1 [Caldithrix abyssi DSM 13497]
gi|371719771|gb|EHO41542.1| Peptide chain release factor 1 [Caldithrix abyssi DSM 13497]
Length = 359
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 246/355 (69%), Gaps = 2/355 (0%)
Query: 57 KLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESRA 116
K+++ K +L+ +L+DP V ++ Y++L++ +E+ +++ + + EE++A
Sbjct: 4 KIQALQKRLDELNKELSDPSVFNDQGRYKQLSREHSEISKILEIGAPYLKALEAYEENKA 63
Query: 117 LAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGDE 176
+ +E+ +D E+A + E + L ++ + EEKLK+LL+P DP DA+N ++E+RAG GGDE
Sbjct: 64 IIEED-SDPELAALAKEENEDLEKKIADYEEKLKLLLIPKDPDDAKNAIVEIRAGTGGDE 122
Query: 177 AGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVHR 236
A I+AGDL RMY +Y E + +K ++SS+ +E+GGFK ++ ++G Y LKYESGVHR
Sbjct: 123 AAIFAGDLYRMYTRYCEDHGFKIDVMSSTPSERGGFKEIIFMVEGPDAYGTLKYESGVHR 182
Query: 237 VQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 296
VQRVP+TE QGRVHTS A+VA++PEA+EV+V IDP ++ + RS G GGQ+VN ++A+
Sbjct: 183 VQRVPETETQGRVHTSAASVAVLPEAEEVDVEIDPNELRIDVFRSSGPGGQSVNTTDSAV 242
Query: 297 DLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGARA 356
+ H PTG+ + C +E++Q +NK++AL++LR +L ++ ++EQ+ I QR S VG+G R+
Sbjct: 243 RITHIPTGLVVTCQDEKSQHKNKAKALKVLRTRLLDMAMQEQRSAIDAQRKSMVGSGDRS 302
Query: 357 EKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
KIRTYN+ RVTDHR+ + ++L ++G++D +++ + E L+E E+
Sbjct: 303 AKIRTYNFPQGRVTDHRIGLTLYKLDRIMEGDLDELIEALHLAARNEKLQEEYEA 357
>gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
15897]
gi|224525621|gb|EEF94726.1| peptide chain release factor 1 [Catenibacterium mitsuokai DSM
15897]
Length = 358
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 236/349 (67%), Gaps = 3/349 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ +L++ K +++L+ L DP + ++ + + ++ A L++ + Y+++K +EE
Sbjct: 4 LLERLQTVEKRYEELTQILMDPSIANDIQKMTQASKEQASLEKAYNLYKEYKALLDGIEE 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L EN D E+ EM E++ L + +E +++ L+P DP D +N+++E+R AG
Sbjct: 64 AKELLNEN--DPEIKEMAKMELEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAG 121
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE I+AGDL RMY KY+E WK + + +E GG+ + IKGN VYSK+K+ESG
Sbjct: 122 GDEGNIFAGDLFRMYSKYAESQGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESG 181
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE QGRVHTSTATV +MPEA+EV++ IDPKD+ + T RS GAGGQ++NK +
Sbjct: 182 SHRVQRVPKTETQGRVHTSTATVLVMPEAEEVDIDIDPKDLRIDTYRSSGAGGQHINKTD 241
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + R+Q N+++A+Q LR ++YE K+RE++EK+ +R +++G+G
Sbjct: 242 SAVRITHIPTGIVATSQDGRSQHDNRAKAMQSLRTRVYEAKLREEEEKLGNERRNKIGSG 301
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQK 401
RAEKIRTYNY NRVTDHR+ + +L ++G ++ + + +Q+
Sbjct: 302 DRAEKIRTYNYPQNRVTDHRIGLTIQQLDRIMEGKLEPIIDALINEDQR 350
>gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1]
gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1]
Length = 358
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 241/353 (68%), Gaps = 2/353 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L++ ++ L+ L+DP ++S+ ++ ++ ++ +++ E V YR++KD +QL++
Sbjct: 4 VLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 63
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ E+ D +M EM+ E+ L ++ L E+LK+LL+P DP D +N+++EVR AG
Sbjct: 64 AKAML-EDKLDADMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK +I +S E GG+K ++ I G ++KLK+E+G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KD+ + T S G GGQ+VN
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++Q++NK +A+++LRA++Y+ +E Q + R VGTG
Sbjct: 243 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEYDQNRKQAVGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYN+ NRVTDHR+ + + L L G +D+ + + +Q + +E
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQAQRME 355
>gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493]
gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111]
gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii Q321]
gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154]
gi|30581025|sp|P47849.2|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039967|sp|A9KGY3.1|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|189039968|sp|A9N9K2.1|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238058710|sp|B6J625.1|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
RSA 493]
gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
Dugway 5J108-111]
gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii Q321]
gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii
CbuK_Q154]
Length = 361
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 243/359 (67%), Gaps = 4/359 (1%)
Query: 52 PYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQL 111
P LI KL++ + ++ L+D V+++ Y++L + A+L+ +V +++F+ EK +
Sbjct: 3 PSLIEKLKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAI 62
Query: 112 EESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
E + + +E D E+ ++ E++ L+ + ELE++LK+LL+P DP D RN+ LE+RAG
Sbjct: 63 ESAEEMQQEK--DPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAG 120
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GG+EA I+AGDL RMY +Y+E W+ ++S+ E E GGFK V+ + G VYS+LK+E
Sbjct: 121 TGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFE 180
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVN 290
SG HRVQRVP TE+QGR+HTS TVAIMPE DE++ + I+P ++ + T R+ GAGGQ+VN
Sbjct: 181 SGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVN 240
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
+ ++AI + H PTG+ + C +ER+Q +NK+RA+ LL++KL + +Q ++ +R S V
Sbjct: 241 RTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLV 300
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
G+G R+E+IRTYN+ RVTDHR+ + ++L ++G++D + Q E L EL+
Sbjct: 301 GSGDRSERIRTYNFPQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIRELQAEQLAELS 359
>gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
Length = 357
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 240/358 (67%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ ++ L+ L+DPE+V++ + ++ ++ + + E V YR++K+ Q ++
Sbjct: 1 MYDRLQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++A+ +E D EM EM+ EI L + + LE +LK+LL+P DP D +N+++E+R AG
Sbjct: 61 AKAMLEEK-LDAEMREMVKEEIGELEDRVEALEARLKILLIPKDPNDDKNVIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +++E WK +I +S GG+K ++ I GN +SKLK+E+G
Sbjct: 120 GDEAALFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKFENG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+ GR+HTSTATVA++PEA+EVE+ I KDI + T S G GGQ+VN
Sbjct: 180 AHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG + C +E++Q++NK +A+++LRA++Y+ +E Q + QR S VGTG
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKFQQEAQAEYDQQRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ NRVTDHR+ + + L L G +D + + EQ L+E +++
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIMEEQSAKLKEASDA 357
>gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
Length = 354
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 7/352 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL + ++ +S+ L +PE+VS+ ++ KL++ +L+++V Y D + +
Sbjct: 1 MIDKLYAIKGRFEQVSLALTNPEIVSDNKQFSKLSKEYRQLEKIVKVY----DAYMKTLD 56
Query: 114 SRALAKE--NGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAG 171
+ A KE DEEM E+ E ++L E E ++ LL+P DP D +N MLE+R G
Sbjct: 57 NIAFNKEVLESGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLEIRGG 116
Query: 172 AGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYE 231
GGDEA ++AGDL+RMY +Y E W ++++ + GG+K VV+E+ G+ VY LK+E
Sbjct: 117 TGGDEASLFAGDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGTLKFE 176
Query: 232 SGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNK 291
SGVHRVQRVP TE QGRVHTS ATVAI+PEA+EV+V I DI++ T RS GAGGQ+VNK
Sbjct: 177 SGVHRVQRVPATETQGRVHTSAATVAILPEAEEVDVEIRDADIKMDTFRSSGAGGQHVNK 236
Query: 292 VETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVG 351
E+A+ L H P+G+ + C E R+Q N+ A+++LR+++YE VR+ +E I +QR S V
Sbjct: 237 TESAVRLTHIPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEEAIASQRKSLVS 296
Query: 352 TGARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
TG R+ KIRTYNY RVTDHR+ M + L +F++G+I VQ+ E E
Sbjct: 297 TGDRSAKIRTYNYPQGRVTDHRIGMTMYNLDAFMNGDIQEMVQALQFAENAE 348
>gi|333899125|ref|YP_004472998.1| peptide chain release factor 1 [Pseudomonas fulva 12-X]
gi|333114390|gb|AEF20904.1| Peptide chain release factor 1 [Pseudomonas fulva 12-X]
Length = 360
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 238/358 (66%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI KL+ +++++ L D EV+SN ++++ ++ AE++ V++ +R+F+ + LE
Sbjct: 5 LINKLDLLQDRFEEVTALLGDAEVISNQTQFRAYSKEYAEIEPVIAAFREFRKVQGDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ AL K++ D ++ EM E+ + L ELE+ L+ +LLP DP D RN+ LEVRAG G
Sbjct: 65 ALALLKDS--DPDLREMAEEEVDTARARLAELEDSLQRMLLPKDPNDGRNVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ W+ ++S++E E GGFK V+ ++G+ V+ KLK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVFGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADE-VEVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP+TE+QGR+HTS TVA++PE DE + + I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPETESQGRIHTSACTVAVLPEPDEQMAIEINPADLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG + C EER+Q +N+++A+ L AKL + + ++I R VG+
Sbjct: 243 DSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLKDQQDAAAHKEISDTRKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L + G +D ++ A Q + L L++
Sbjct: 303 GDRSERIRTYNFPQGRVTDHRINLTLYSLGEVIAGGVDAVIEPLLAEYQADQLAALSD 360
>gi|333397786|ref|ZP_08479599.1| peptide chain release factor 1 [Leuconostoc gelidum KCTC 3527]
gi|406599366|ref|YP_006744712.1| peptide chain release factor 1 [Leuconostoc gelidum JB7]
gi|406370901|gb|AFS39826.1| peptide chain release factor 1 [Leuconostoc gelidum JB7]
Length = 357
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 234/358 (65%), Gaps = 5/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L++ + +L+ +LADP+V + +Y L + E+ E V+ Y +K Q+ +
Sbjct: 4 IFQSLQTVVDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVAVYTHYK----QVMQ 59
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ A++ +D EMA + ++ +L E IELE++LK+L+LP DP D +NI++E+R AG
Sbjct: 60 GISDAEDMLDDAEMAPLAKEDLNTLKPEKIELEDQLKILMLPKDPNDDKNIIMEIRGAAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDE+ ++A DL+ MY++Y+E+ W ++I + E GG+K V + I G+ VYSKLK+ESG
Sbjct: 120 GDESSLFAADLLDMYRRYAEKQRWAVSIIDETITEVGGYKEVAIMITGDNVYSKLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE QGRVHTSTATV +MPE +E++ + D+E RSGGAGGQNVNKV
Sbjct: 180 AHRVQRVPSTETQGRVHTSTATVGVMPEFEEIDFELAESDLEEEFFRSGGAGGQNVNKVS 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ L HKPTGI + EERTQ++N+ +A +LL +++Y+ ++ + + +R S VGTG
Sbjct: 240 TAVRLVHKPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAEYAEKRKSAVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY NRVTDHR+ + +L ++G + V + Q L EL ++
Sbjct: 300 DRSERIRTYNYPQNRVTDHRIGLTLNKLDRIMNGELGEIVDALVIANQTAKLAELNQA 357
>gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
Length = 360
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 238/356 (66%), Gaps = 4/356 (1%)
Query: 56 TKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEESR 115
+KLE+ A+ ++L+ LA+PE+ S ++++L+Q A+L+ V+S +R F+ + L+ES+
Sbjct: 7 SKLETLAERQQELTALLAEPEIASAQKQFRELSQEYAQLEPVISCFRDFEQAQNVLDESK 66
Query: 116 ALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAGGD 175
AL ++ D E+ + EI + +L L+ +L LLLP+DP D RNI LE+RAG GGD
Sbjct: 67 ALLQDQ--DPELRVLAQEEIAATEKKLERLDRELHTLLLPTDPNDKRNIFLEIRAGTGGD 124
Query: 176 EAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESGVH 235
EA ++A DL+RMY +Y EQ W+ ++ S E GG K +++ I G YS+LK+ESG H
Sbjct: 125 EAALFASDLLRMYLRYVEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGH 184
Query: 236 RVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKVET 294
RVQRVPQTE+QGR+HTS TVAIMPEA+E+ E+ I+P D+ + T R+ GAGGQ+VNK ++
Sbjct: 185 RVQRVPQTESQGRIHTSACTVAIMPEAEEIDEIDINPADLRVDTFRASGAGGQHVNKTDS 244
Query: 295 AIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTGA 354
AI + H P+GI + C +ER+Q +N++RA+ LLR KL + + + R S +G+G
Sbjct: 245 AIRITHLPSGIVVECQDERSQHKNRARAMSLLRTKLKLEEEEKLVAEETATRRSLIGSGD 304
Query: 355 RAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+E+IRTYN+ RVTDHR+ + ++L L GN+D + A Q + L L++
Sbjct: 305 RSERIRTYNFPQGRVTDHRINLTLYKLDEILQGNLDAIIDLLVAEYQADQLAALSD 360
>gi|398969075|ref|ZP_10682688.1| peptide chain release factor 1 [Pseudomonas sp. GM30]
gi|398142769|gb|EJM31660.1| peptide chain release factor 1 [Pseudomonas sp. GM30]
Length = 360
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L+ KL++ +++L+ L D EV+S+ ++++ ++ AEL+ VV Y+K + LE
Sbjct: 5 LLNKLDTLQDRFEELTALLGDGEVISDQAKFRAYSKEYAELEPVVQGYKKLLGVQSDLEG 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL K++ D +M EM E++ LI LE+ L+ +LLP DP D RN+ LE+RAG G
Sbjct: 65 AQALLKDS--DPDMREMAVEEVREAKELLIRLEDDLQRMLLPKDPNDGRNVFLEIRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I++GDL RMY +Y+E+ W+ ++S +E E GG+K V+ I+G+ VY KLK+ESG
Sbjct: 123 GDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVV-IDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA++PE DE E + I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG + C EER+Q +N++RA+ L AKL + + I ++R VG+
Sbjct: 243 DSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASERKLLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ RVTDHR+ + + L L G ++ ++ A Q + L + E
Sbjct: 303 GDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQADQLAAIGE 360
>gi|442322337|ref|YP_007362358.1| peptide chain release factor 1 [Myxococcus stipitatus DSM 14675]
gi|441489979|gb|AGC46674.1| peptide chain release factor 1 [Myxococcus stipitatus DSM 14675]
Length = 364
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 246/366 (67%), Gaps = 13/366 (3%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KLE + ++ L+ L++P+V+++ + QK+++ A ++++V T+R ++ L+E
Sbjct: 1 MIDKLEDVERRFERLTADLSNPDVLADSARLQKVSKERAGIEKLVETFRTYRQVLADLKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
A + G DE+ A + L + LE +LKVLLLP DP D +N++LE+RAGAG
Sbjct: 61 VEAWLESGGPDEKSYAREA--LPGLKEQRDTLESQLKVLLLPKDPNDDKNVILEIRAGAG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A ++++MY +Y++ WK +I S GG K + + G+ V+S LKYESG
Sbjct: 119 GDEAALFAEEVMQMYLRYADTRGWKSDIIDMSPGNAGGVKDATVTLSGDAVFSNLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE QGR+HTST TVA+MPEA+EV+V I+ DI+ RS G+GGQ+VN +
Sbjct: 179 VHRVQRVPATETQGRIHTSTITVAVMPEAEEVDVKINEADIDRQAMRSTGSGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQ----RLSQ 349
+A+ L H+PTGI + C +E++QL+N + AL++LRAK+YEI +QE+IR++ R SQ
Sbjct: 239 SAVRLTHRPTGIVVKCQQEKSQLKNYNMALRMLRAKIYEI----EQERIRSERDSTRRSQ 294
Query: 350 VGTGARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEELA 408
VGTG R+EKIRTYN+ +R+TDHR+ + L + + G+I++ + +C Q E L+ A
Sbjct: 295 VGTGDRSEKIRTYNFPQDRLTDHRIGLTVHNLPAVMTGDIEDIITACRTFYQAEALK--A 352
Query: 409 ESVGAP 414
++ G P
Sbjct: 353 QTGGGP 358
>gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC
700641]
gi|417920711|ref|ZP_12564211.1| peptide chain release factor 1 [Streptococcus australis ATCC
700641]
gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC
700641]
gi|342828139|gb|EGU62515.1| peptide chain release factor 1 [Streptococcus australis ATCC
700641]
Length = 359
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 237/355 (66%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L++ +++L L+DP++VS+ + +L++ A + V+ YR++K + + +
Sbjct: 3 IYDQLQAVEDRYEELGELLSDPDMVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVD 62
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + KE G D ++ EM E+K E E EEKLK+LLLP DP D +NI+LE+R AG
Sbjct: 63 AEEMIKEAGGDSDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL++MYQKY+E W+ ++ +S GG K VV + G VYSKLKYESG
Sbjct: 123 GDEAQLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGRVHTSTATV +MPE +EVE IDPKD+ + + GAGGQNVNKV
Sbjct: 183 AHRVQRVPVTESQGRVHTSTATVLVMPEIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVA 242
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+ + H PT I++ EERTQ +N+ +A++++RA++ + + Q++ +R S +GTG
Sbjct: 243 TAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQDAERKSTIGTG 302
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFE-LTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + + L + L G +D V + +Q + LEEL
Sbjct: 303 DRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQTQKLEEL 357
>gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
gi|238686878|sp|A8ZTL8.1|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
Length = 356
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 235/354 (66%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +L+ + + +L +ADP +V++ YQK ++ AEL ++V YR++K ++E+
Sbjct: 1 MFDRLQDVERRFGELEGLMADPSIVNDREAYQKHSREHAELADIVDAYRRYKAVSDEIEK 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L ++ D E+ E+ EI L +E L+ +L+ LL P DP D +N+++E+RAG G
Sbjct: 61 SRDLLEDR--DPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E WK ++SSS GGFK V+ + G YS LK+ESG
Sbjct: 119 GEEASLFAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
+HRVQRVP+TEAQGR+HTS TVA++ EA+EVE+ IDP +I+ RS G GGQ+VN +
Sbjct: 179 IHRVQRVPETEAQGRIHTSAVTVAVLAEAEEVELHIDPSEIKTDVFRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ L H PTG+ + C +E++QL+NK++A+++LRA+L + +++Q EKI R QVG+G
Sbjct: 239 SAVRLTHLPTGVVVICQDEKSQLKNKNKAMKVLRARLLDRMIQDQNEKIAQNRKDQVGSG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
R+ +IRTYN+ RVTDHR + ++L S L G++ V A Q E L++
Sbjct: 299 DRSGRIRTYNFPQGRVTDHRAGITLYKLESVLQGDLSELVNGLATYFQAERLKQ 352
>gi|448747308|ref|ZP_21728968.1| Peptide chain release factor 1 [Halomonas titanicae BH1]
gi|445565000|gb|ELY21113.1| Peptide chain release factor 1 [Halomonas titanicae BH1]
Length = 362
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 242/359 (67%), Gaps = 5/359 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L +L+S + +++L++ L+DP+V++N ++ ++ AEL+E+V+ +++++D E + E
Sbjct: 5 LRQRLDSFTERFEELAMLLSDPDVINNQQRFRDYSREYAELEELVAAWQRYRDIETNMHE 64
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L++++ D +M E+ E+ L EL+ +LK LL+P DP D R + LEVRAG G
Sbjct: 65 AEQLSRDS--DADMRELAEMELSEGRERLAELDIELKRLLVPKDPDDGRGVFLEVRAGTG 122
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA I+AGDL RMY +Y+E+ W+ ++S+S E+GG+K ++ +KG+ VY++LK+ESG
Sbjct: 123 GDEAAIFAGDLFRMYSRYAEKRGWRVEVVSASHGEQGGYKEIISRVKGDGVYAQLKFESG 182
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEV-EVVIDPKDIELTTARSGGAGGQNVNKV 292
HRVQRVP TE+QGR+HTS TVA+MPE D+V ++ I+P D+ + T RS GAGGQ+VN
Sbjct: 183 AHRVQRVPATESQGRIHTSACTVAVMPEVDDVGDIDINPSDLRVDTYRSSGAGGQHVNTT 242
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++AI + H PTG+ + C EER+Q +N+++A+ LL AKL V Q++ R S VG+
Sbjct: 243 DSAIRITHLPTGVVVECQEERSQHKNRAKAMSLLAAKLKRNAVDSQRQTQADARRSLVGS 302
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDG-NIDNAVQSCAAMEQKELLEELAE 409
G R+E+IRTYN+ R+TDHR+ + ++L + G +D+ + Q E L L +
Sbjct: 303 GDRSERIRTYNFPQGRITDHRINLTLYKLNEVVSGEQLDDVISPLIHEYQAEQLSALQD 361
>gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1]
gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5]
gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5]
gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1]
Length = 352
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 237/356 (66%), Gaps = 10/356 (2%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
L KL+ + L++ L PEV+++ +L++ A L+E+ +++ Q++E
Sbjct: 2 LSQKLKEVVARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQIQE 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++AL + D+E+ E+ E+KSL + L + +K+LL+P DP D++NI LE+RAG G
Sbjct: 62 NKALLE----DKELGELAKEELKSLEEQSKNLGDHIKILLIPKDPNDSKNIYLELRAGTG 117
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAGI+ GDL R Y +Y++ WK ++SSSE GG+K ++ IKG VYS+LK+E+G
Sbjct: 118 GDEAGIFVGDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAG 177
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP+TE+QGR+HTS TVAIMPEAD+VE+ I+P D+ + R+GG GGQ VN +
Sbjct: 178 THRVQRVPETESQGRIHTSAITVAIMPEADDVEININPSDLRIEVFRAGGHGGQCVNTTD 237
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + +E++Q +N+ +AL++L+A+LYE ++ EQQ+ +R QVG+G
Sbjct: 238 SAVRITHIPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQAHSAERKMQVGSG 297
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSF----LDGNIDNAVQSCAAMEQKELLE 405
R+E+IRTYNY NR++DHR+ N L S L GN+D ++ A Q + LE
Sbjct: 298 DRSERIRTYNYPQNRLSDHRI--NLTLYSLEELMLSGNLDPVIEPLIAHAQAQGLE 351
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,012,510,739
Number of Sequences: 23463169
Number of extensions: 236089073
Number of successful extensions: 707693
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8741
Number of HSP's successfully gapped in prelim test: 494
Number of HSP's that attempted gapping in prelim test: 687169
Number of HSP's gapped (non-prelim): 9926
length of query: 416
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 271
effective length of database: 8,957,035,862
effective search space: 2427356718602
effective search space used: 2427356718602
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)