BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014874
(416 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8DMG9|RF1_THEEB Peptide chain release factor 1 OS=Thermosynechococcus elongatus
(strain BP-1) GN=prfA PE=3 SV=1
Length = 364
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/360 (65%), Positives = 295/360 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL + +T+ +L+ +LADP+V NP+E+QK+A+S A L+E V+ Y +++
Sbjct: 1 MAEAYLLEKLRTVEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLN 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+QL ++R L KE N+ E+ +M EI LS+ + +LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 QQLVDARQLHKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEAGIWAGDLVRMY +Y++ W+ TL+S S AE GGFK ++EIKG+RVYSKL
Sbjct: 121 RAGAGGDEAGIWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYESGVHRVQRVP TEA GR+HTSTATVA+MPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KYESGVHRVQRVPATEASGRIHTSTATVAVMPEVDEVEVEIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL+HKPTGIRIFCTEER+QL+NK RA Q+LRAKLYEIK+REQQE I + R S
Sbjct: 241 VNKVETAVDLYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQEAITSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKD+RVTDHRL NF L+S L+G+++ +Q+C + +Q+E L +LA
Sbjct: 301 QVGTGDRSEKIRTYNYKDDRVTDHRLGQNFSLSSVLEGDLEPIIQACISRDQQEQLAQLA 360
>sp|Q110D7|RF1_TRIEI Peptide chain release factor 1 OS=Trichodesmium erythraeum (strain
IMS101) GN=prfA PE=3 SV=1
Length = 369
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 230/366 (62%), Positives = 296/366 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+++LADP+V +PSE+QKLA++ + L+EVV+ Y ++K+ +
Sbjct: 1 MAETYLLDKLKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +++ + KE D EM EM E++ L +L LE ++K+ LLP DP D +NIMLE+
Sbjct: 61 EELADAKEILKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +YSE SWK +L+S S A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV ID KDIEL+TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVEIDQKDIELSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCT+ER+QLQN+ RA+Q+LRAKLYEIK++EQQ ++ + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQEQQAEVSSIRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+I+N +Q+C +Q+E L+ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLNQNFSLVPLLEGDIENVIQACITQDQQERLQELA 360
Query: 409 ESVGAP 414
S P
Sbjct: 361 ASSSTP 366
>sp|B0JYC5|RF1_MICAN Peptide chain release factor 1 OS=Microcystis aeruginosa (strain
NIES-843) GN=prfA PE=3 SV=1
Length = 366
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 291/360 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP+V NP E +LA+S A L+E V+TY ++ +
Sbjct: 1 MAESYLLDKLQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L ++ + KE+ +D E+ EM A E+ L ++ LE++L +LLLP DPLD +NIMLE+
Sbjct: 61 EDLIGAKQIFKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y KY+E +WK +L+S S+A+ GGFK ++EIKG+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPLTEASGRVHTSTATVAIMPEVDDVEVHIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLY++K++EQQE + + R S
Sbjct: 241 VNKVETAVDLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR+TDHRL NF L LDG+I+ +QSC A +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRLTDHRLNQNFSLDRILDGDIEEVIQSCIAKDQQEKLAELA 360
>sp|B8HXV0|RF1_CYAP4 Peptide chain release factor 1 OS=Cyanothece sp. (strain PCC 7425 /
ATCC 29141) GN=prfA PE=3 SV=1
Length = 364
Score = 490 bits (1261), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/360 (63%), Positives = 287/360 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S T+ +L+ +LADPEV ++P E+Q++A++ A L+E V TY +K +
Sbjct: 1 MAESYLLDKLKSVELTFHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L E+R +A+E +D E+ EM E+ L+ + LE++LK+LLLP DP D +NIMLE+
Sbjct: 61 QHLAEARQIAREAASDPELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVR+Y +Y+E W+ L+S S E GGFK ++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATEASGRVHTSTATVAIMPEVDEVEVKIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE+K++EQQ +I ++R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLQEQQSEITSRRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL NF L L+G+I+ +Q+C +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNFPLNQVLEGDIEGIIQACITQDQQEQLAELA 360
>sp|Q5N0T6|RF1_SYNP6 Peptide chain release factor 1 OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=prfA PE=3 SV=1
Length = 368
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 223/361 (61%), Positives = 291/361 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAEPYLI KL+S +T++DL+ +LADPE+ ++P E+Q++A+ + ++E+V+TY ++K +
Sbjct: 1 MAEPYLIEKLQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRD 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L+ +R + +E+ D E+ EM A E+ L L+ LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 AELKGAREILRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA +WAGDL+RMY +Y+E W+ L+S S E GG+K ++EI+G VYSKL
Sbjct: 121 RAGTGGDEASLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEVSIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL +NF L L+G I+ +Q+C + +Q E L ++A
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGLNFSLNPVLEGEIEEVIQACISKDQTEQLAQMA 360
Query: 409 E 409
+
Sbjct: 361 Q 361
>sp|Q31L36|RF1_SYNE7 Peptide chain release factor 1 OS=Synechococcus elongatus (strain
PCC 7942) GN=prfA PE=3 SV=1
Length = 368
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 223/361 (61%), Positives = 291/361 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAEPYLI KL+S +T++DL+ +LADPE+ ++P E+Q++A+ + ++E+V+TY ++K +
Sbjct: 1 MAEPYLIEKLQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRD 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+L+ +R + +E+ D E+ EM A E+ L L+ LEE+LK+LLLP DP D +NIMLE+
Sbjct: 61 AELKGAREILRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA +WAGDL+RMY +Y+E W+ L+S S E GG+K ++EI+G VYSKL
Sbjct: 121 RAGTGGDEASLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIELTTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEVSIDPKDIELTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL +NF L L+G I+ +Q+C + +Q E L ++A
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGLNFSLNPVLEGEIEEVIQACISKDQTEQLAQMA 360
Query: 409 E 409
+
Sbjct: 361 Q 361
>sp|P74707|RF1_SYNY3 Peptide chain release factor 1 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=prfA PE=3 SV=1
Length = 365
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 225/362 (62%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL S +T+++L+ LADP++ +NP E Q++A++ + L+E V TY +K +
Sbjct: 1 MAETYLLDKLASVEQTYQELTRMLADPDIATNPDELQRVAKARSSLEETVDTYETWKRSQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+ +R + KE+GND EM EM E++ L N + ELE++L +LLLP DP D +NIMLE+
Sbjct: 61 EDLKGARQIVKESGNDPEMREMAQLEVEELENAIGELEKRLTILLLPKDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E WK +L+S S A+ GGFK ++E+KG+RVYS+L
Sbjct: 121 RAGTGGDEASIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEVKGDRVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVKIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLY++ ++EQ + I + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQNDAISSNRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF+L + L+G I ++SC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGRNFDLNTALEGEIHTIIESCISQDQQERLAELA 360
Query: 409 ES 410
E+
Sbjct: 361 EA 362
>sp|Q3MF91|RF1_ANAVT Peptide chain release factor 1 OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=prfA PE=3 SV=1
Length = 366
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/365 (62%), Positives = 291/365 (79%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +LADP+ NP EYQK+A+S + L+EVV+TY +K +
Sbjct: 1 MAESYLLEKLKSVEQTFNELTRRLADPDTARNPDEYQKIAKSRSSLEEVVNTYETWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE+ +D E+ E+ A E+ L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELIGARQVLKESNSDPELQEIAALEVNELEEKIKYLETRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ W+ L+S S E GGFK V++EI+G+ VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGDSVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R TDHRL NF L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRATDHRLGQNFSLNPVLEGDLETVIQSCISQDQQERLAELA 360
Query: 409 ESVGA 413
S A
Sbjct: 361 TSSAA 365
>sp|Q8YPK9|RF1_NOSS1 Peptide chain release factor 1 OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=prfA PE=3 SV=1
Length = 366
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 288/365 (78%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ NP EYQK+A+S + L+EVV TY +K +
Sbjct: 1 MAESYLLEKLKSVEQTFNELTRRLGDPDTAKNPDEYQKIAKSRSSLEEVVETYDNWKIAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +R + KE +D +M EM A E+K L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EELIGARQVLKEANSDPDMHEMAALEVKELEEKIDYLETRLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y++ W+ L+S S E GGFK V++EI+G VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATEAGGRVHTSTATVAIMPEVDEVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYEIK+REQQE++ + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEEVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKD+R TDHRL NF L L+G+++ +QSC + +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDSRATDHRLGQNFSLNPVLEGDLETVIQSCISQDQQERLAELA 360
Query: 409 ESVGA 413
S A
Sbjct: 361 TSSAA 365
>sp|B2ITM5|RF1_NOSP7 Peptide chain release factor 1 OS=Nostoc punctiforme (strain ATCC
29133 / PCC 73102) GN=prfA PE=3 SV=1
Length = 365
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 225/362 (62%), Positives = 290/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DP+ SNP EYQ++A+S + L+EVV+TY +K +
Sbjct: 1 MAESYLLDKLKSVEQTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTYEIWKTAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L +R + KE+ +D E+ EM + E+K L ++ LE +LKVLLLP DP D +NIMLE+
Sbjct: 61 EDLIGAREVYKESASDPELQEMASLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL++MY +Y++ WK +L+S S E GG+K V++EIKGN VYS+L
Sbjct: 121 RAGTGGDEASIWAGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+ GRVHTSTATVAIMPE D+VE+ IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESGGRVHTSTATVAIMPEVDDVEIHIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLY+IK+ EQQ + + R S
Sbjct: 241 VNKVETAVDLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLGEQQAAVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNR TDHRL N+ LT LDG+++ +QSC +++Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRATDHRLGQNYSLTPVLDGDLETLIQSCISLDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 TS 362
>sp|B1XJH8|RF1_SYNP2 Peptide chain release factor 1 OS=Synechococcus sp. (strain ATCC
27264 / PCC 7002 / PR-6) GN=prfA PE=3 SV=1
Length = 363
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 219/360 (60%), Positives = 295/360 (81%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++++ +LADP++ +NP E Q++A+ + L+E V+T+ ++K+ +
Sbjct: 1 MAEAYLLDKLKSVEQTFQEMTRRLADPDIATNPDELQRVAKIRSSLEETVNTFNQWKEAQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L ++ + KE+ D EM EM A E++ L N + LE +LK+LLLP DP D +NIMLE+
Sbjct: 61 EELRGAKEILKESAGDPEMKEMAALEVEELENTIDTLENRLKILLLPKDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDL+RMY +Y+E +W+ L+S S A+ GGFK V++EI+G +VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEIQGEQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTAT+A+MPE D+VEV IDPKDIE+TTARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPVTEAGGRVHTSTATIAVMPEVDDVEVEIDPKDIEMTTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE++++ QQE++ + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEEVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L L+G+I++ +Q+C + +Q+ LE+LA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFSLAPALEGDIEDMLQACISQDQQAQLEQLA 360
>sp|B7KI17|RF1_CYAP7 Peptide chain release factor 1 OS=Cyanothece sp. (strain PCC 7424)
GN=prfA PE=3 SV=1
Length = 370
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/362 (64%), Positives = 293/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+K+L+ +LADP++ +NP E Q++A++ + L+E V+TY ++ +
Sbjct: 1 MAEAYLLEKLKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTK 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+++ +R + KE G D EM EM A E++ L +L +LE KLKVLLLP DP D +NIMLE+
Sbjct: 61 EEITGARQILKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E +W L+S S A+ GGFK ++EIKG++VYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE DEVEV IDPKDIE++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDEVEVQIDPKDIEVSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLFHKPTGIRIFCTEER+QLQN+ RA+Q+LRAKLYE+K+REQQE + + R S
Sbjct: 241 VNKVETAVDLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQEAVSSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G+I+ +QSC +Q+E L ELA
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLGQNFSLVGALEGDIEVIIQSCIGKDQQERLAELA 360
Query: 409 ES 410
S
Sbjct: 361 NS 362
>sp|B0C424|RF1_ACAM1 Peptide chain release factor 1 OS=Acaryochloris marina (strain MBIC
11017) GN=prfA PE=3 SV=1
Length = 363
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 218/347 (62%), Positives = 278/347 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+ +L+ +L DPEV +NP+E+Q++A++ A L+E V+T+ +K +
Sbjct: 1 MAEAYLLEKLKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKATQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L +++ +AK+ D E+ EM A E L+ +L LE KLKVLLLP DP D +NIMLE+
Sbjct: 61 QELADAQQMAKDGDEDPELKEMAAMEAAELTEKLDGLETKLKVLLLPRDPNDEKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDLVR+Y KY+E W+ L+S S E GGFK ++EI+G RVYSKL
Sbjct: 121 RAGAGGDEASIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TEA GRVHTSTATVA+MPE D+VE+ IDPKDIE++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATEASGRVHTSTATVAVMPEVDDVEIEIDPKDIEMSTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIRIFCTEER+QLQNK RA+Q+LRAKLYE++++EQQ + + R S
Sbjct: 241 VNKVETAVDLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQEQQASVTSMRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSC 395
QVGTGAR+EKIRTYNYKDNR TDHRL NF L L G+I+ +++C
Sbjct: 301 QVGTGARSEKIRTYNYKDNRATDHRLNQNFPLEKVLVGDIELILETC 347
>sp|B7K205|RF1_CYAP8 Peptide chain release factor 1 OS=Cyanothece sp. (strain PCC 8801)
GN=prfA PE=3 SV=1
Length = 370
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/362 (62%), Positives = 292/362 (80%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MAE YL+ KL+S +T+++L+ +LADP++ +NP E Q++A+ + L+E V TY +K +
Sbjct: 1 MAESYLLEKLQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L ++ + K+ G D EM EM A E++ L+ +L ELE+KLK+LLLP DP D +NIMLE+
Sbjct: 61 EELIGAKQILKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GGDEA IWAGDLVRMY +Y+E W L+S S A+ GGFK ++EI+G+RVYSKL
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEA GRVHTSTATVAIMPE D+VEV ID KDIE+TTARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAGGRVHTSTATVAIMPEVDDVEVQIDAKDIEITTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DLF+KP GIRIFCTEER+QLQN+ RA+Q+LRAKLY++K+REQQ+ + + R S
Sbjct: 241 VNKVETAVDLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKLREQQDAVSSMRKS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTGAR+EKIRTYNYKDNRVTDHRL NF L L+G+I+ +QSC + +Q+E LEELA
Sbjct: 301 QVGTGARSEKIRTYNYKDNRVTDHRLGQNFSLAGTLEGDIEEIIQSCISQDQQERLEELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>sp|A3PF19|RF1_PROM0 Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
MIT 9301) GN=prfA PE=3 SV=1
Length = 364
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 280/358 (78%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ +L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEVGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ + V
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVINACIAQEQKRMMEDFNKGV 363
>sp|A8G733|RF1_PROM2 Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
MIT 9215) GN=prfA PE=3 SV=1
Length = 364
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/358 (56%), Positives = 277/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A+ ++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASVSFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GSEACIWAGDLARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEIGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK +LE+ A +
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVINACIAQEQKRMLEDFANEI 363
>sp|Q2JL68|RF1_SYNJB Peptide chain release factor 1 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=prfA PE=3 SV=1
Length = 360
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 281/360 (78%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA LI +L++ T+++L+V+LADP+V ++P+E Q++A++ + L+ V + ++
Sbjct: 1 MASAQLIDQLKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQAFHDWQKLN 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ L+++ L +E+ +D E+ M +E++ L +LEEKL +LLLP DP D +NIMLE+
Sbjct: 61 RDLQQTEELLRESASDPELEAMARAELEQLRARQEQLEEKLTLLLLPRDPNDDKNIMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA +WA DL RMY +Y+E+ W L S SE E GG+K ++EI+G++VYSKL
Sbjct: 121 RAGTGGEEAALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEIQGDQVYSKL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TEAQGRVHTSTATVA+MPE DEVEVVIDPKDIE+ TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDEVEVVIDPKDIEIKTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQ I + R
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQASISSARRM 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L LDG +D+ +Q+C + QKELL EL+
Sbjct: 301 QVGTGSRSEKIRTYNYKDNRVTDHRLNQNFPLQPILDGELDDLIQACIGLYQKELLAELS 360
>sp|A2BTA9|RF1_PROMS Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
AS9601) GN=prfA PE=3 SV=1
Length = 364
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 279/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ +L EL +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPIDLEVGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ V
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVIDACIAQEQKRMMEDFNNEV 363
>sp|Q318L3|RF1_PROM9 Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
MIT 9312) GN=prfA PE=3 SV=1
Length = 364
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 278/358 (77%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++++L V+LADP++ ++P + + +A+ ++L+ +V + K D +K++E+
Sbjct: 6 LIARLKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIED 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND+EM +I E+ +L +L +K + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKNLLKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G EA IWAGDL RMY++Y ++ W +S+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GSEACIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTDLEVGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRLSQVGTG
Sbjct: 246 TAIDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAESV 411
R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ V
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFSLEPILAGQLDEVIDACIAQEQKRMMEDFNNDV 363
>sp|Q7UZX1|RF1_PROMP Peptide chain release factor 1 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=prfA PE=3 SV=1
Length = 364
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/357 (56%), Positives = 280/357 (78%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A++++ +L ++LADP++ +NP + + +A+ A+L+ +V + + D +K++ +
Sbjct: 6 LIARLKNASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGD 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ L KEN ND++M +I E+ SL + +L EKL + LLP DP D R++MLE+RAGAG
Sbjct: 66 SKQLLKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA IWAGDL RMY++Y ++ W IS+SE++ GGFK +V+ +KG+ VYS+LK+E+G
Sbjct: 126 GNEACIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP +IE+ TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPTEIEIGTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E K R+QRL QVG+G
Sbjct: 246 TAIDLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANAKERSQRLMQVGSG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+EKIRTYN+KDNR TDHRL NF L L G +D+ + +C A EQK +LE+ E+
Sbjct: 306 DRSEKIRTYNFKDNRTTDHRLGSNFALEPILAGQLDDVIYACLAQEQKRMLEDFNEN 362
>sp|A2BYQ7|RF1_PROM5 Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
MIT 9515) GN=prfA PE=3 SV=1
Length = 364
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 281/360 (78%), Gaps = 6/360 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI +L++A+K++ +L ++LADP++ +NP + + +A+ A+L+ +V + + D +K++++
Sbjct: 6 LIARLKTASKSFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDD 65
Query: 114 SRALAKENGNDEEMAEMIASEI---KSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRA 170
SR L K+N ND++M +I E+ + L N LI+ K+ + LLP DP D R++MLE+RA
Sbjct: 66 SRQLLKDNRNDKDMELLINEELCNLEVLKNSLIQ---KVTIALLPKDPRDERSVMLEIRA 122
Query: 171 GAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKY 230
GAGG+EA IWAGDL RMY++Y ++ W IS+SE++ GGFK +V+ IKG+ VYS+LK+
Sbjct: 123 GAGGNEACIWAGDLARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKF 182
Query: 231 ESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVN 290
E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP D+E+ TARSGGAGGQNVN
Sbjct: 183 EAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKIDPSDLEIGTARSGGAGGQNVN 242
Query: 291 KVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQV 350
KVETAIDL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKLYEI+++E +K R+QRL QV
Sbjct: 243 KVETAIDLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLKEANDKERSQRLMQV 302
Query: 351 GTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
GTG R+EKIRTYN+KDNR TDHRL NF L L G +D + +C A EQK ++E+ E+
Sbjct: 303 GTGDRSEKIRTYNFKDNRTTDHRLGSNFALEPILAGQLDEVIDACIAQEQKRIMEDFNEN 362
>sp|Q2JUK1|RF1_SYNJA Peptide chain release factor 1 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=prfA PE=3 SV=1
Length = 361
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/361 (58%), Positives = 283/361 (78%), Gaps = 1/361 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
MA LI +L++ T+++L+V+LADP+V ++P+E Q++A++ + L+ V T+ +++
Sbjct: 1 MASAQLIEQLKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQTFHEWQKLT 60
Query: 109 KQLEESRALAKENGNDE-EMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
++L+++ L +E +D+ E+ M +E++ L +LEEKL +LLLP DP D +NIMLE
Sbjct: 61 RELKQTEELLREVASDDPELEAMARAELEQLRVRQEQLEEKLTLLLLPRDPNDEKNIMLE 120
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAG GG+EA +WA DL RMY +Y+E+ W L S SE E GG+K ++EI+G++VYSK
Sbjct: 121 IRAGTGGEEAALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEIRGDQVYSK 180
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LK+E+GVHRVQRVP TEAQGRVHTSTATVA+MPE DEVEVVIDPKDIE+ TARSGGAGGQ
Sbjct: 181 LKFEAGVHRVQRVPVTEAQGRVHTSTATVAVMPEVDEVEVVIDPKDIEIKTARSGGAGGQ 240
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVETA+DL HKPTGIR+FCTEER+QLQN+ RA+Q+LRAKLYE+K++EQQ I + R
Sbjct: 241 NVNKVETAVDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQASISSARR 300
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG+R+EKIRTYNYKDNRVTDHRL NF L L+G +D +Q+C + QKELL EL
Sbjct: 301 MQVGTGSRSEKIRTYNYKDNRVTDHRLNQNFLLEPILEGELDELIQACIGLYQKELLAEL 360
Query: 408 A 408
+
Sbjct: 361 S 361
>sp|A2C4X1|RF1_PROM1 Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
NATL1A) GN=prfA PE=3 SV=1
Length = 365
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 276/360 (76%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI +LE+A ++++L ++LADP+V S+P + + +A+ + L+ +V+ Y K + E
Sbjct: 1 MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E++ L KE+ +D+EM + E+++L EL +KL + LLP DP D R++MLE+
Sbjct: 61 KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGG+EA +WAGDL RMY++Y ++ W ISS+EA+ GGF+ +++ +KG VYS+L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+ D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVKIESTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETAIDLFHKP+GIR+FCT+ER+Q+QN+ RA+++LRAKL E+++ E K R+ RLS
Sbjct: 241 VNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIAEANAKERSARLS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L L G +++ + +C A EQK +EEL+
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIAEEQKRQMEELS 360
>sp|Q7U4H2|RF1_SYNPX Peptide chain release factor 1 OS=Synechococcus sp. (strain WH8102)
GN=prfA PE=3 SV=1
Length = 365
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/361 (54%), Positives = 273/361 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L+ +LE+A ++++L +LADP+V ++P+ +K+A+ A L+ +V + + + E
Sbjct: 1 MDASTLLARLEAATASFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ ++SR L KE D M E+ ++ SL+ EL EKL V LLP DP D R++MLE+
Sbjct: 61 GEQKQSRELLKECRGDAAMEELAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++YS++ W ISS+EA+ GGF+ +++ +KG+ V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKP+GIR+FCT+ER+QLQN+ RAL++LRAKL E + RE + + R +
Sbjct: 241 VNKVETAVDLLHKPSGIRVFCTQERSQLQNRERALEILRAKLLEQEQREAAARESSDRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L LDG +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFSLDPVLDGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 E 409
+
Sbjct: 361 Q 361
>sp|Q46IT8|RF1_PROMT Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
NATL2A) GN=prfA PE=3 SV=1
Length = 365
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 276/360 (76%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI +LE+A ++++L ++LADP+V S+P + + +A+ + L+ +V+ Y K + E
Sbjct: 1 MDSSTLIKRLETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E++ L KE+ +D+EM + E+++L EL +KL + LLP DP D R++MLE+
Sbjct: 61 KECLEAKGLVKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGG+EA +WAGDL RMY++Y ++ W ISS+EA+ GGF+ +++ +KG VYS+L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+ D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVKIESTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETAIDLFHKP+GIR+FCT+ER+Q+QN+ RA+++LRAKL E+++ E K R+ RLS
Sbjct: 241 VNKVETAIDLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELAEANAKERSARLS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L L G +++ + +C A EQK +EEL+
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGVNFPLEQVLSGQLEDVIGACIAEEQKRQMEELS 360
>sp|Q0ID34|RF1_SYNS3 Peptide chain release factor 1 OS=Synechococcus sp. (strain CC9311)
GN=prfA PE=3 SV=1
Length = 364
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 270/356 (75%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
LI++LE+A+ ++ +L +LADP+V ++P + +A+ + L+ +V Y + E + +
Sbjct: 6 LISRLEAASSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQ 65
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+++L KE+ D M E+ E++ L +L +++ + LLP DP D R++MLE+RAGAG
Sbjct: 66 AKSLLKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAG 125
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA +WAGDL RMY+++S + W T +S++EA+ GG+K +++ +KG+ V+S+LK+E+G
Sbjct: 126 GDEACLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAG 185
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP+D++++TARSGGAGGQNVNKVE
Sbjct: 186 VHRVQRVPSTESQGRVHTSTATVAVMPEADPVEVQIDPRDLDISTARSGGAGGQNVNKVE 245
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
TA+DL HKPTGIR+FCT+ER+Q+QN+ RAL++LRAKLYE ++ E R+ R SQVGTG
Sbjct: 246 TAVDLMHKPTGIRVFCTQERSQMQNRERALEILRAKLYERQLAEANASERSARRSQVGTG 305
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELAE 409
R+EKIRTYN KDNR+TDHRL NF L L+G +D+ + +C A EQ+ L +L+E
Sbjct: 306 DRSEKIRTYNAKDNRMTDHRLGRNFSLDPVLEGQMDDVIDACIAEEQRGKLADLSE 361
>sp|Q7ND15|RF1_GLOVI Peptide chain release factor 1 OS=Gloeobacter violaceus (strain PCC
7421) GN=prfA PE=3 SV=1
Length = 364
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/365 (55%), Positives = 258/365 (70%), Gaps = 2/365 (0%)
Query: 49 MAEPYL-ITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDC 107
MA P L + KL +T+ DL+ +L DP + SNP E ++ + A L+ V Y ++
Sbjct: 1 MASPDLMVQKLNDIERTYNDLTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQRL 60
Query: 108 EKQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLE 167
+ R + ++ D E+ E+ E L + LE+++ +LLLP DP D +N+MLE
Sbjct: 61 CAERNAVRQMIRDE-QDPELRELAEEEHTGLEERIARLEDEITLLLLPRDPNDDKNVMLE 119
Query: 168 VRAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSK 227
+RAG GGDEA I+AGDL+RMY +Y+E W L S S AE GGFK V++EI+G VYSK
Sbjct: 120 IRAGTGGDEAAIFAGDLMRMYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSK 179
Query: 228 LKYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQ 287
LK+E+GVHRVQRVP TE QGRVHTSTATVAIMPE +EV+V I+P DIE+TT RSGGAGGQ
Sbjct: 180 LKFEAGVHRVQRVPVTETQGRVHTSTATVAIMPEVEEVDVEINPNDIEITTTRSGGAGGQ 239
Query: 288 NVNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRL 347
NVNKVETA+ L HKP+GI I C EER+QLQNK+RA+Q+LR KLY+IK REQ E++ R
Sbjct: 240 NVNKVETAVHLVHKPSGIHIHCQEERSQLQNKARAMQILRVKLYDIKQREQHEQVSGLRR 299
Query: 348 SQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
SQVGTG R+EKIRTYNYKDNRVTDHRL NF L + ++G I+ +QS A Q+E L EL
Sbjct: 300 SQVGTGDRSEKIRTYNYKDNRVTDHRLSQNFTLNTAIEGEIETLIQSAIAAAQREQLAEL 359
Query: 408 AESVG 412
A S G
Sbjct: 360 ARSSG 364
>sp|Q3AMQ9|RF1_SYNSC Peptide chain release factor 1 OS=Synechococcus sp. (strain CC9605)
GN=prfA PE=3 SV=1
Length = 365
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 269/365 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L T+LE+A ++++L +LADP+V ++P + +A+ + L+ +V + + + E
Sbjct: 1 MDASTLFTRLETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ + +R L K++ D M E+ E+ SL + L E+L + LLP DP D R++MLE+
Sbjct: 61 SERDSARQLLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY++YS++ W IS +EA+ GGF+ +++ ++G+ VYS+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD++++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLDISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E + E+ + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L+G +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 ESVGA 413
+ A
Sbjct: 361 DQAEA 365
>sp|A9BCL8|RF1_PROM4 Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
MIT 9211) GN=prfA PE=3 SV=1
Length = 365
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/361 (54%), Positives = 275/361 (76%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L +LE+A ++++L ++LADP+V S+P + +A+ A L+ +V Y K + E
Sbjct: 1 MDTSTLKIRLETARSSFQNLELQLADPDVASDPKRLETIARERARLEPLVLDYEKLLEIE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++L E + + +E+ +D+++ E+ E++ L L +L + LLP DP D R++MLE+
Sbjct: 61 EELLEVKDVLRESKSDKDLEELAQDEMRKLELFKTNLINQLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y ++ W ISS++A+ GGF+ +++ +KG+ V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISVKGDSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DP D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQLDPGDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKL E+++ E K R+ RL+
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLEMEIAEANAKERSARLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L + L+G +DN + +C A EQ+ ++EEL
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGINFPLENVLEGELDNLIGACIAEEQRLMIEELG 360
Query: 409 E 409
E
Sbjct: 361 E 361
>sp|A5GIR6|RF1_SYNPW Peptide chain release factor 1 OS=Synechococcus sp. (strain WH7803)
GN=prfA PE=3 SV=1
Length = 365
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 191/360 (53%), Positives = 267/360 (74%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LI++LE+A ++ +L +LADP+V S+P+ Q +A+ + L+ +V+ Y + +
Sbjct: 1 MDPSTLISRLEAARSSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYASLQAVQ 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ E++R L +++ DEEMA + E+ L L E+L + LLP DP D R++MLE+
Sbjct: 61 SEREQARELLRDSRGDEEMAHLAQLELDELDIRHEALIERLTLALLPRDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY+++S + W +S+SEA+ GGFK +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGESVFSEL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV I+P D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVQIEPADLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL H+P+GIR+FCT+ER+QLQN+ RA+++LRAKLYE ++ E + + R +
Sbjct: 241 VNKVETAVDLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLYERQLAEANARESSARRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYN KDNRVTDHRL NF L L G +++ + +C A EQ+ LE L+
Sbjct: 301 QVGTGDRSEKIRTYNAKDNRVTDHRLGRNFSLDPVLQGQMEDVIGACIAEEQRSKLEALS 360
>sp|Q7V9Z0|RF1_PROMA Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
SARG / CCMP1375 / SS120) GN=prfA PE=3 SV=1
Length = 365
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/360 (52%), Positives = 271/360 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L +LE+A+ T+ +L ++LADP+V S+P + + +A+ A L+ +V Y++ + +
Sbjct: 1 MDTSTLKARLETASATFNNLELQLADPDVASDPKKLETIARERARLEPLVLDYKELQAID 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ +E++ L +++ +D+EM + E+ L +L +L + LLP DP D R++MLE+
Sbjct: 61 LEYKEAKELLRQSKSDKEMEALAQEELIRLEELEKDLVNRLTLALLPKDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y + W +S++EA+ GGF+ +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISVKGKAVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV ++P D+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVEVKLEPTDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RAL++LRAKL E ++ E K R+ RL+
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIEEANAKERSARLA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL +NF L + L+G +D+ + +C A EQ+ +E+L
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGVNFPLETVLEGELDDLIGACIAEEQRLKMEKLG 360
>sp|A5GVY9|RF1_SYNR3 Peptide chain release factor 1 OS=Synechococcus sp. (strain RCC307)
GN=prfA PE=3 SV=1
Length = 364
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 272/362 (75%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + ++ +LE+ +T+ L +LADP V ++P + LA+ + L+ +V Y++ +
Sbjct: 1 MDQSFVTERLEATCRTFNALERQLADPSVAADPEQLLTLAKERSRLEPLVLDYQRLQQLH 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
+ ++++ L KE+ D E+ + E++ LS+E +L ++LKV LLPSDP D R++MLE+
Sbjct: 61 AEHQQAQQLLKESKGDAELEALAQEELQQLSSEQEQLNQRLKVALLPSDPRDERSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA +WAGDL RMY+++++ W+ +S+SEAE GGFK +++ I+G+ V+S+L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFKELILAIRGDAVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
KYE+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD V+V IDPKD++++TARSGGAGGQN
Sbjct: 181 KYEAGVHRVQRVPATESQGRVHTSTATVAVMPEADPVDVQIDPKDLDISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT+ER+QLQN+ RA+++LRAKL + E + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLLAKEEEEAAAAESSARRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L + L+G + + +++C +Q++ LEELA
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGKNFPLETVLNGQLSDLIEACTHADQQQKLEELA 360
Query: 409 ES 410
S
Sbjct: 361 AS 362
>sp|Q7V518|RF1_PROMM Peptide chain release factor 1 OS=Prochlorococcus marinus (strain
MIT 9313) GN=prfA PE=3 SV=1
Length = 365
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/360 (51%), Positives = 265/360 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M LIT+LE+A +++ L +LADP+V ++P + +A+ A L+ +V + + E
Sbjct: 1 MDSSTLITRLETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++ +E++ L +E+ D+ M + E++ L L +L + LLPSDP D R++MLE+
Sbjct: 61 QEWQETKQLLRESRGDDAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGG+EA +WAGDL RMY++Y ++ W +S++EA+ GGF+ +++ IKG+ V+S+L
Sbjct: 121 RAGAGGNEACLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV IDP ++E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQIDPSELEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT++R+QLQN+ RA+++LRAKL E ++ E + + R +
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKLLERQIAEANARESSTRRA 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVGTG R+EKIRTYNYKDNR TDHRL NF L L G ++ + +C A EQ+ LEEL+
Sbjct: 301 QVGTGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLTGQLEELIGACIAEEQRHQLEELS 360
>sp|Q3AW64|RF1_SYNS9 Peptide chain release factor 1 OS=Synechococcus sp. (strain CC9902)
GN=prfA PE=3 SV=1
Length = 365
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 265/361 (73%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M L ++L++A +++ L +LADP+V ++P + +A+ + L+ +V + + E
Sbjct: 1 MDASTLTSRLQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLE 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
++ ++R L +E+ +D M E+ E+ L + L ++L + LLP DP D R++MLE+
Sbjct: 61 QEQADARELLRESRSDAAMQELAQDELSELEAQHTALLQRLTLALLPRDPRDDRSVMLEI 120
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAGAGGDEA IWAGDL RMY++Y ++ W +S +EA+ GG++ +++ +KG V+S+L
Sbjct: 121 RAGAGGDEACIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGTSVFSQL 180
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+E+GVHRVQRVP TE+QGRVHTSTATVA+MPEAD VEV +DPKD+E++TARSGGAGGQN
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVELDPKDLEISTARSGGAGGQN 240
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNKVETA+DL HKPTGIR+FCT++R+QLQN+ RAL++LRAKL E ++ E+ + R S
Sbjct: 241 VNKVETAVDLLHKPTGIRVFCTQQRSQLQNRERALEILRAKLLERELAAAAERESSHRRS 300
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
QVG+G R+EKIRTYNYKDNR TDHRL NF L L G +++ + +C A EQ++ LE L+
Sbjct: 301 QVGSGDRSEKIRTYNYKDNRTTDHRLGRNFSLEPVLQGQLEDLIGACIAEEQRQKLEALS 360
Query: 409 E 409
E
Sbjct: 361 E 361
>sp|A0Q312|RF1_CLONN Peptide chain release factor 1 OS=Clostridium novyi (strain NT)
GN=prfA PE=3 SV=1
Length = 357
Score = 355 bits (911), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 258/356 (72%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE +++LS+K++DP V++N +E++KL + AEL+ +V+ YR++K +++LE
Sbjct: 1 MLDKLEFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E D++M EMI EIK+L +++ +E+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 NKEMLSEE-TDKDMKEMIQEEIKTLEESIVKDQEELKILLLPKDPNDDKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY +Y+E++ WK L+S++E + GGFK VV ++G+ YSK+K+ESG
Sbjct: 120 GDEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE D+V++ IDP DI + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E++QL+NK +A+++L+A+LYE E+ I R SQVGTG
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAERSASISADRKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYNY RVT+HR+ + ++L +FLDG+++ + + EQ E ++ +
Sbjct: 300 DRSERIRTYNYPQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQAEKMKAMG 355
>sp|Q0SQY1|RF1_CLOPS Peptide chain release factor 1 OS=Clostridium perfringens (strain
SM101 / Type A) GN=prfA PE=3 SV=1
Length = 360
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 255/358 (71%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L + +LSVK++DP +++N E++KL + A+L+ +V+ Y+++K+ ++LE
Sbjct: 2 ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E +D+EM EMI SEIK L+ ELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSEE-SDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY KY+E+N WK L+S++E + GGFK VV IKG YSKLKYESG
Sbjct: 121 GDEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PE D+VE+ I+ KDI++ R+ G GGQ VN +
Sbjct: 181 AHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LRA+L+E E+ I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLFEQAEAERLAGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ M ++L SFL+G+ID + + +Q + ++ + +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQAQKMKAMGNT 358
>sp|Q8XIB9|RF1_CLOPE Peptide chain release factor 1 OS=Clostridium perfringens (strain
13 / Type A) GN=prfA PE=3 SV=1
Length = 360
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 255/358 (71%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L + +LSVK++DP +++N E++KL + A+L+ +V+ Y+++K+ ++LE
Sbjct: 2 ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E +D+EM EMI SEIK L+ ELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSEE-SDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY KY+E+N WK L+S++E + GGFK VV IKG YSKLKYESG
Sbjct: 121 GDEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PE D+VE+ I+ KDI++ R+ G GGQ VN +
Sbjct: 181 AHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LRA+L+E E+ I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLFEQAEAERLAGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ M ++L SFL+G+ID + + +Q + ++ + +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQAQKMKAMGNT 358
>sp|Q0TNB0|RF1_CLOP1 Peptide chain release factor 1 OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=prfA PE=3 SV=1
Length = 360
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 255/358 (71%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +L + +LSVK++DP +++N E++KL + A+L+ +V+ Y+++K+ ++LE
Sbjct: 2 ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E +D+EM EMI SEIK L+ ELE+++++LLLP DP D +N+ +E+R GAG
Sbjct: 62 NKEMLSEE-SDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++A +L RMY KY+E+N WK L+S++E + GGFK VV IKG YSKLKYESG
Sbjct: 121 GDEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTSTATVA++PE D+VE+ I+ KDI++ R+ G GGQ VN +
Sbjct: 181 AHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++QL+NK +A+++LRA+L+E E+ I R SQVGTG
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLFEQAEAERLAGIAEDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYNY RVTDHR+ M ++L SFL+G+ID + + +Q + ++ + +
Sbjct: 301 DRSERIRTYNYPQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQAQKMKAMGNT 358
>sp|B3EE55|RF1_CHLL2 Peptide chain release factor 1 OS=Chlorobium limicola (strain DSM
245 / NBRC 103803) GN=prfA PE=3 SV=1
Length = 357
Score = 348 bits (892), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/354 (48%), Positives = 242/354 (68%), Gaps = 3/354 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KL+S + DL +LADP S+ + ++KL + ++L E+V + ++ KQLEE
Sbjct: 1 MFDKLQSIKEKHLDLEQQLADPSAASDQNRFRKLNKEYSDLKEIVHAFDRYSLARKQLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
SR L D +M E++ EI+ L +L ELE++LKVLLLP D D+RN+++E+RAG G
Sbjct: 61 SRELLGSE-KDPQMRELVQMEIEDLQEKLPELEQQLKVLLLPKDEADSRNVIMEIRAGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAE-KGGFKTVVMEIKGNRVYSKLKYES 232
GDEA ++A DL+RMYQ+Y+E+ WKC L+ +E+ GGF+ V +E+ G+ V++ +KYES
Sbjct: 120 GDEAALFAADLLRMYQRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYES 179
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TE QGR+HTS A+VA++PEA+EV+V I D+ T RSGG GGQNVNKV
Sbjct: 180 GVHRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
ETA+ + H PTGI C EER+QLQNK RA+ +LR KLY+I++ EQQ++ R S V T
Sbjct: 240 ETAVRITHLPTGIVAACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADLRRSMVST 299
Query: 353 GARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLE 405
G R+ KIRTYNY +RVTDHR+ + L + G I + +++ +Q L+
Sbjct: 300 GDRSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGEIGDVIEALKLHDQTARLQ 353
>sp|C4XIQ1|RF1_DESMR Peptide chain release factor 1 OS=Desulfovibrio magneticus (strain
ATCC 700980 / DSM 13731 / RS-1) GN=prfA PE=3 SV=1
Length = 357
Score = 347 bits (890), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 254/358 (70%), Gaps = 3/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ KLES + ++DL +L+ P+VVS+ ++KL+++ ++L +VV+ +R++K + LE+
Sbjct: 1 MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ +A++ D E+ E+ +E K+L +ELE +LKVLLLP DP+D +NI+LE+RAG G
Sbjct: 61 NQEMAQDP--DPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E WK ++S SE GGFK V+ I G++VYS+LKYESG
Sbjct: 119 GDEAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESG 178
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+QGR+HTS TVAIMPEA+EV+V IDP ++ + RS G GGQ+VN +
Sbjct: 179 AHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTD 238
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H P+G+ + C +E++Q +NK++AL++LR++L +++ +Q+ + R SQVGTG
Sbjct: 239 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAARRSQVGTG 298
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ RVTDHR+ + + L + L+G++D + Q E L+ A++
Sbjct: 299 DRSERIRTYNFPQGRVTDHRINLTLYRLDAVLEGDLDELCGALIGHYQAEALKAQADA 356
>sp|Q97F68|RF1_CLOAB Peptide chain release factor 1 OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=prfA PE=3 SV=1
Length = 359
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 247/358 (68%), Gaps = 2/358 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ +LE + +LSVK++DP V++N SE+QKL + +E++ +V YR++K ++ LE
Sbjct: 1 MLERLEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEA 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ + ++ D E+ EM+ EIK L +++ EE+L+V+LLP DP D++N+ +E+R G G
Sbjct: 61 DKEMLRDK-IDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A DL RMY +Y+E+ W ++S++E + GGFK +V +KGN YS++KYESG
Sbjct: 120 GEEAALFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
HRVQRVP TE+ GR+HTS ATVA++PE D+V++ I+P DI + R+ G GGQ VN +
Sbjct: 180 THRVQRVPNTESSGRIHTSAATVAVLPEVDDVDIEINPNDIRIDVFRASGHGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTGI + C +E+ QL+NK +A+++LRA+LYE E+ I R +QVG+G
Sbjct: 240 SAVRITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERNAGIAENRRNQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELAES 410
R+E+IRTYN+ R+TDHR+ + ++L FLDG+ID + EQ E ++E+ +
Sbjct: 300 DRSERIRTYNFPQGRITDHRIGLTIYKLEQFLDGDIDEVINGLITAEQAEKMKEMGNT 357
>sp|B0S2B6|RF1_FINM2 Peptide chain release factor 1 OS=Finegoldia magna (strain ATCC
29328) GN=prfA PE=3 SV=1
Length = 355
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 163/352 (46%), Positives = 246/352 (69%), Gaps = 2/352 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ L+S +KDL VK+ADPEV+++ + KL + A+L+ VV+ Y +KD K LEE
Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L G D EM E++ EI +L ++ + +E+LK+LLLP DP D +N+ +E+RAGAG
Sbjct: 61 DKELLGTTG-DSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++AG+L+RMYQ YS++ W ++ + GG K VVM +KG YS+LKYESG
Sbjct: 120 GDEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVPQTE+ GR+HTSTATVA++PEA++V+V I+ KD+ + R+ G GGQ VN +
Sbjct: 180 VHRVQRVPQTESSGRIHTSTATVAVLPEAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++Q++NK +A+++L+++LY++ E+ + R SQVGTG
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKNKDRADARKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRL-KMNFELTSFLDGNIDNAVQSCAAMEQKELL 404
R+E+IRTYN+ R+TDHR+ K F+L +FLDG+I+ + + +Q E L
Sbjct: 300 DRSERIRTYNFPQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQAEKL 351
>sp|B8E003|RF1_DICTD Peptide chain release factor 1 OS=Dictyoglomus turgidum (strain
Z-1310 / DSM 6724) GN=prfA PE=3 SV=1
Length = 367
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 256/368 (69%), Gaps = 2/368 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M + +I KLE K ++++ LA +V+S+ ++YQ L + A+++E+V +R++K
Sbjct: 1 MLQKLVIDKLEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K+ E+ + KE DE++ + +E++ + +L ++E +LK LLLP DP D +NI++E+
Sbjct: 61 KEKEDLEEMVKEE-QDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEI 119
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
RAG GG+EA ++A DL RMY Y+++ WK ++SS+ GGFK ++ ++G YS+L
Sbjct: 120 RAGTGGEEAALFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRL 179
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP TE+ GR+HTSTATVA++PE +E+EV IDPKD+ + T RSGGAGGQ+
Sbjct: 180 KFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEIEVEIDPKDLRIETFRSGGAGGQH 239
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VNK E+ + + H P+GI + C +ER+Q QN+ +A+++LRA+LYE RE++ +I +QR
Sbjct: 240 VNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQ 299
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG R+EKIRTYN+ RVTDHR+ +F+L L G +D + E++E +++L
Sbjct: 300 QVGTGERSEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEKEEQIKKL 359
Query: 408 AESVGAPS 415
E VGA S
Sbjct: 360 FEEVGATS 367
>sp|A8MJX9|RF1_ALKOO Peptide chain release factor 1 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=prfA PE=3 SV=1
Length = 357
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 252/355 (70%), Gaps = 1/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KL + ++DLS K+++PE++++ +++KL + ++L+E+V YR++K E+ L +
Sbjct: 1 MLDKLAFLEEKYEDLSEKISEPEIINDQPQWKKLVKEHSDLEEIVMKYREYKKTEQGLND 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + ++ DEE EM EI L ++ LE +LK+LLLP DP D +++++E+RAGAG
Sbjct: 61 AKEILRDKTADEEFREMAKMEIAELEEKIEVLEGELKILLLPKDPNDDKDVIVEIRAGAG 120
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEAG++A DL RMY +Y+E WK ++S+++ GG+K V+ IKG+ YS+LKYESG
Sbjct: 121 GDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMIKGHGAYSRLKYESG 180
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTST TVA++PEAD+V+ +D DI + RS G GGQ+VN +
Sbjct: 181 VHRVQRIPSTESGGRIHTSTITVAVLPEADDVDFELDMNDIRVDVFRSSGNGGQSVNTTD 240
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C +E++QL+NK +AL++LRA+L ++ ++EQQ +I R SQVGTG
Sbjct: 241 SAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQEQQAEIAQDRKSQVGTG 300
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ R+TDHR+ + + L SFL+G+I + + +Q E L+E+
Sbjct: 301 DRSERIRTYNFPQGRITDHRINVTLYRLDSFLNGDIQEMIDALITTDQAEKLKEV 355
>sp|Q2LWU9|RF1_SYNAS Peptide chain release factor 1 OS=Syntrophus aciditrophicus (strain
SB) GN=prfA PE=3 SV=1
Length = 357
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/355 (47%), Positives = 242/355 (68%), Gaps = 4/355 (1%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ +KL+ + +L L+DP VV+ S YQK A+ A+L ++V +RK++ +EE
Sbjct: 1 MFSKLKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ L + G+DEE+ E+ E+ L L LEE+LKVLLLP D D RN+ LE+RAG G
Sbjct: 61 AQQLLR--GDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTG 118
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEK-GGFKTVVMEIKGNRVYSKLKYES 232
GDEAG++ GDL RMY +Y+E WK +ISS+ + GGFK ++ I G YS+LKYES
Sbjct: 119 GDEAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYES 178
Query: 233 GVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKV 292
GVHRVQRVP TEAQGR+HTS TVAIMPEADEVEV IDP D+ + S G GGQ+VN
Sbjct: 179 GVHRVQRVPVTEAQGRIHTSAVTVAIMPEADEVEVTIDPNDLRIDVFHSSGHGGQSVNTT 238
Query: 293 ETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGT 352
++A+ + H PTG+ + C +E++QL+NK++AL++LRA+L +I V++Q ++I R SQVG+
Sbjct: 239 DSAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDEISEARKSQVGS 298
Query: 353 GARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEE 406
G R+E+IRTYN+ RVTDHR+ + + L + L G+I + + A Q E L++
Sbjct: 299 GDRSERIRTYNFPQGRVTDHRVGLTLYSLENILGGDIQEFIDALTAYFQAESLKQ 353
>sp|C0QTI3|RF1_PERMH Peptide chain release factor 1 OS=Persephonella marina (strain DSM
14350 / EX-H1) GN=prfA PE=3 SV=1
Length = 361
Score = 342 bits (877), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 165/362 (45%), Positives = 255/362 (70%), Gaps = 3/362 (0%)
Query: 49 MAEPYLITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCE 108
M YL+ KLE+ + K L L+DPEV+ + + Q++A+ E +++ Y+++K
Sbjct: 1 MLNKYLLQKLENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVL 60
Query: 109 KQLEESRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEV 168
K +EE+++L N DEEM + E+K+L+ ELE+++++ LLP DP D +N++LE+
Sbjct: 61 KDIEETKSLL--NNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEI 118
Query: 169 RAGAGGDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKL 228
R GAGG+EA ++AG+L RMYQ+Y+E+ WK ++S ++GG K V+ IKG YS+L
Sbjct: 119 RQGAGGEEAALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRL 178
Query: 229 KYESGVHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQN 288
K+ESGVHRVQRVP+TE+ GR+HTSTATVA++PEA+EV++ I P+++++ T R+ GAGGQ+
Sbjct: 179 KFESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEELKIETMRASGAGGQH 238
Query: 289 VNKVETAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLS 348
VN ++A+ + H PTGI + C +ER+QLQN+++A+Q+LRA+L + R ++EKI +R
Sbjct: 239 VNTTDSAVRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLEREKIEKERRM 298
Query: 349 QVGTGARAEKIRTYNYKDNRVTDHRLKM-NFELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
QVGTG R+EKIRTYN+ NRVTDHR+ + L LDG++D + A EQ++ L +
Sbjct: 299 QVGTGDRSEKIRTYNFPQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQEQKLLAI 358
Query: 408 AE 409
+E
Sbjct: 359 SE 360
>sp|Q180Y2|RF1_CLOD6 Peptide chain release factor 1 OS=Clostridium difficile (strain
630) GN=prfA PE=3 SV=1
Length = 354
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 248/350 (70%), Gaps = 2/350 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE T+KDLS K+ DP+V+++ +QK + A+L+ +V YR++K ++E
Sbjct: 1 MLKKLEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
S+ + +E +DEE+ E+ E+ + ++ LEE++K+LLLP DP D +N+++E+R GAG
Sbjct: 61 SKEILQEE-SDEELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+ WK L+S+S+ GG+K V IKG YS+LKYESG
Sbjct: 120 GDEAALFAGDLFRMYSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTST+TVA++PE ++VEV I+P D+ + RS G GGQ+VN +
Sbjct: 180 VHRVQRIPSTESGGRIHTSTSTVAVLPEVEDVEVEINPNDLRIDVFRSSGNGGQSVNTTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG + C + ++QL+NK +AL++L+A+LY+ + EQ + I +R SQVGTG
Sbjct: 240 SAVRVTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKALAEQHKDIAAERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKE 402
R+E+IRTYN+ R++DHR+ + ++L +FLDG+ID + + ++Q E
Sbjct: 300 DRSERIRTYNFPQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQTE 349
>sp|A4XJN1|RF1_CALS8 Peptide chain release factor 1 OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=prfA
PE=3 SV=1
Length = 355
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 250/356 (70%), Gaps = 2/356 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+I KL+ + + +L K++DPE+++N E+QKL + + L +V +R++K K +EE
Sbjct: 1 MIEKLQVIEEKYLELEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYKRIIKTIEE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+ L N DE+ +++ E+ + +E +LK+LLLP DP D +N+++E+RAGAG
Sbjct: 61 AEELLDTN-LDEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++A +L RMY +Y+E+ +WK ++S+SE++ GFK V+ I G YS+LKYESG
Sbjct: 120 GEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TE+ GR+HTSTATVA++PE ++VEV I +D+E+ T R+GGAGGQ+VNK E
Sbjct: 180 VHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIETFRAGGAGGQHVNKTE 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + HKPTGI + C +ER+Q N+ RA+++LRA+LY+ QQ++I +QR SQVGTG
Sbjct: 240 SAVRITHKPTGIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMN-FELTSFLDGNIDNAVQSCAAMEQKELLEELA 408
R+E+IRTYN+ RVTDHR+ + ++L LDG++D + + Q E L+E+
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALITHFQTERLKEVG 355
>sp|A3DIL4|RF1_CLOTH Peptide chain release factor 1 OS=Clostridium thermocellum (strain
ATCC 27405 / DSM 1237) GN=prfA PE=3 SV=1
Length = 360
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 237/325 (72%), Gaps = 1/325 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
+ K ++A + +++ +L+DP V++N EY+KL + AEL+ +V+ Y ++K K++ +
Sbjct: 1 MFEKFQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIAD 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
++ + E D+E EM+ +E+K +L L++++K+LLLP DP D RN+++E+R GAG
Sbjct: 61 AKEMLNEKL-DKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
GDEA ++AGDL RMY +Y+E+N WK ++ S+ E GGFK VV I+GN YS+LK+ESG
Sbjct: 120 GDEAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQRVP TEA GRVHTST TVA++PEA+E++V I+P D+ + T R+ GAGGQ++NK +
Sbjct: 180 VHRVQRVPVTEANGRVHTSTVTVAVLPEAEEIDVEINPNDLRIDTYRASGAGGQHINKTD 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+AI + H PTG+ + C ++R+Q +NK +A+++LR+KLYE+ +Q +I +R SQVGTG
Sbjct: 240 SAIRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQHNEIAQERKSQVGTG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF 378
R+E+IRTYN+ RVTDHR+ +
Sbjct: 300 DRSERIRTYNFPQGRVTDHRIGLTL 324
>sp|Q2RFW0|RF1_MOOTA Peptide chain release factor 1 OS=Moorella thermoacetica (strain
ATCC 39073) GN=prfA PE=3 SV=1
Length = 356
Score = 338 bits (867), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 252/355 (70%), Gaps = 2/355 (0%)
Query: 54 LITKLESAAKTWKDLSVKLADPEVVSNPSEYQKLAQSMAELDEVVSTYRKFKDCEKQLEE 113
++ KLE +++L + DPEV+++P + QK A++ A L+++V+T+R+++ +L E
Sbjct: 1 MLEKLEQIEARYEELGRLMGDPEVIADPEQLQKHARAHAALEDIVTTFRRYRQVSNELAE 60
Query: 114 SRALAKENGNDEEMAEMIASEIKSLSNELIELEEKLKVLLLPSDPLDARNIMLEVRAGAG 173
+A+ +E D E E++ +EI+ L+ E LE++LK+LLLP DP D ++I++E+RAGAG
Sbjct: 61 DKAMLEEE-KDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRAGAG 119
Query: 174 GDEAGIWAGDLVRMYQKYSEQNSWKCTLISSSEAEKGGFKTVVMEIKGNRVYSKLKYESG 233
G+EA ++AGDL RMYQ+Y+E+ W+ +ISS E GGFK ++ +++G VYS+LK+ESG
Sbjct: 120 GEEAALFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKFESG 179
Query: 234 VHRVQRVPQTEAQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVE 293
VHRVQR+P TE+ GR+HTSTATVA++PEA+EV+V I P+D+ + S G GGQ+VN
Sbjct: 180 VHRVQRIPTTESGGRIHTSTATVAVLPEAEEVDVEIKPEDLRVDIFCSSGPGGQSVNTTY 239
Query: 294 TAIDLFHKPTGIRIFCTEERTQLQNKSRALQLLRAKLYEIKVREQQEKIRTQRLSQVGTG 353
+A+ + H PTG+ + C +E++QL+NK +A+++LRA+L ++ E++ ++ +R SQVG+G
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGELAEERRSQVGSG 299
Query: 354 ARAEKIRTYNYKDNRVTDHRLKMNF-ELTSFLDGNIDNAVQSCAAMEQKELLEEL 407
R+E+IRTYN+ NRVTDHR+ + L L G +D + + +Q E L+ +
Sbjct: 300 DRSERIRTYNFPQNRVTDHRIGLTLHHLDQVLAGELDEIIDALVTTDQAERLKNM 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,125,385
Number of Sequences: 539616
Number of extensions: 5848939
Number of successful extensions: 20633
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 18268
Number of HSP's gapped (non-prelim): 1226
length of query: 416
length of database: 191,569,459
effective HSP length: 120
effective length of query: 296
effective length of database: 126,815,539
effective search space: 37537399544
effective search space used: 37537399544
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)