Your job contains 1 sequence.
>014875
MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL
LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF
FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV
HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI
SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV
LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW
GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014875
(416 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 1082 1.6e-109 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 379 5.1e-35 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 369 1.2e-32 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 373 2.9e-32 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 371 4.7e-32 1
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 371 4.7e-32 1
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 371 4.7e-32 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 357 1.4e-30 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 328 1.3e-29 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 329 1.8e-28 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 313 5.0e-28 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 324 6.3e-28 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 324 6.5e-28 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 323 8.0e-28 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 322 1.0e-27 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 324 2.3e-27 2
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 313 9.4e-27 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 298 1.9e-26 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 309 2.0e-26 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 310 2.0e-26 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 309 2.5e-26 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 309 2.5e-26 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 316 2.7e-26 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 308 3.1e-26 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 308 3.2e-26 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 311 7.8e-26 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 311 7.9e-26 1
ZFIN|ZDB-GENE-061220-11 - symbol:sergef "secretion regula... 292 8.4e-26 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 311 1.1e-25 1
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 311 1.1e-25 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 303 1.1e-25 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 306 3.7e-25 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 298 3.8e-25 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 285 4.6e-25 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 305 4.7e-25 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 305 4.7e-25 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 305 4.7e-25 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 297 4.8e-25 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 297 4.9e-25 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 297 4.9e-25 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 304 5.9e-25 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 304 6.0e-25 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 296 6.2e-25 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 303 7.6e-25 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 295 8.0e-25 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 285 9.9e-25 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 293 1.3e-24 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 289 3.7e-24 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 279 5.1e-24 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 286 6.2e-24 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 271 1.4e-23 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 269 5.7e-21 1
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 269 6.2e-21 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 263 7.0e-21 1
WB|WBGene00017195 - symbol:glo-4 species:6239 "Caenorhabd... 222 9.1e-21 2
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 267 1.2e-20 1
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 195 1.3e-20 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 267 1.3e-20 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 266 1.6e-20 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 262 1.7e-20 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 198 4.0e-20 2
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 194 4.3e-20 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 263 4.4e-20 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 256 5.0e-20 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 258 5.9e-20 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 261 7.8e-20 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 261 7.9e-20 1
UNIPROTKB|F1NXI5 - symbol:SERGEF "Uncharacterized protein... 194 9.3e-20 2
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 258 1.1e-19 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 243 1.7e-19 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 258 4.0e-19 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 255 4.7e-19 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 249 2.4e-18 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 248 3.3e-18 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 240 3.3e-18 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 240 3.3e-18 1
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 167 6.7e-18 3
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 246 9.2e-18 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 246 1.5e-17 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 241 2.2e-17 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 240 2.9e-17 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 235 3.5e-17 1
SGD|S000003065 - symbol:SRM1 "Nucleotide exchange factor ... 156 4.2e-17 3
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 234 4.6e-17 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 235 1.2e-16 1
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 187 1.4e-16 2
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 228 1.9e-16 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 232 2.6e-16 1
UNIPROTKB|E1BIS5 - symbol:WBSCR16 "Uncharacterized protei... 223 3.6e-16 2
DICTYBASE|DDB_G0276527 - symbol:DDB_G0276527 "putative bi... 233 4.5e-16 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 226 4.5e-16 1
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 205 4.8e-16 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 225 5.3e-16 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 225 5.3e-16 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 229 5.8e-16 1
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 229 5.8e-16 1
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 196 6.4e-16 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 224 6.9e-16 1
FB|FBgn0031769 - symbol:CG9135 species:7227 "Drosophila m... 146 7.1e-16 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 223 9.0e-16 1
WARNING: Descriptions of 122 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 218/376 (57%), Positives = 260/376 (69%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+VWSWGAGTDGQLGT +L DE ACGGAHV+ALTS GGKVF
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTS-----GGKVF 70
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGRGSSGQLGHG++++ PK V+FFD IT +AGW+HSGFVSDSGC+FTCG+G+
Sbjct: 71 TWGRGSSGQLGHGDILNITLPKLVSFFDDS--VITQAAAGWSHSGFVSDSGCIFTCGNGS 128
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLGHGD S S+P KVS F N +V +ACGMRHSLVL GNQV GFGSGKRGQLG
Sbjct: 129 FGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFA---GNQVCGFGSGKRGQLG 185
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXX 274
S DRI+SV+LP V GL D+E+V ISANGD SAA+SA+G ++WGRGF DV+
Sbjct: 186 FSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQS 245
Query: 275 XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL-EKVSNL 333
+GWNH L+LT DGEV LG + + PE+ S AL EKV +
Sbjct: 246 LPSPLSFREVAVGWNHALLLTVDGEVFKLGST---LNKQPEKQQLQIDSSEALFEKVPDF 302
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 393
DGVKV+QIAAGAEHSA VTEN + TWGWGEHGQLGLGNT DQ P++V+LG R
Sbjct: 303 DGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGS-IDLRTK 361
Query: 394 QLEVFCGSGFTYAISR 409
+++V+CGSGFTYA+ R
Sbjct: 362 EIKVYCGSGFTYAVKR 377
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 102/354 (28%), Positives = 150/354 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D CG H +A + G +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVT-IGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD-- 268
DR + +VT G + +V S + S + Y W + G D
Sbjct: 207 G-DRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL 265
Query: 269 VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ GW H + LT DG++ G + G + + P+ V
Sbjct: 266 IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP 325
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 326 -----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 105/345 (30%), Positives = 163/345 (47%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I ++
Sbjct: 21 SAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--IVSVT 73
Query: 133 AGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG H L
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ + +V +G + GQLG+ D S+ +PQ I I ++A + +AA++
Sbjct: 134 AVTME---GEVQSWGRNQNGQLGLG-DTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVT 188
Query: 252 AEGHLYTWG--R----GFNSTSD--VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
+G LY WG R G +D V GW H + ++ G +
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 248
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S +G L + P LE +SN + QI+ G H+ +T + + WGW
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHK--LEALSNSF---ISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQ+G+GN DQ P V D+ ++V CG T A++
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDD----QKVVQVSCGWRHTLAVT 344
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 77/230 (33%), Positives = 113/230 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D A G H A+T G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV D ++V +S + A++ +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRFP-DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 269 (99.8 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 78/267 (29%), Positives = 119/267 (44%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
ISAG +HS + + + G G GQLGHGD SP ++S+ + + CG H+
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ + G +VY +G G G+LG LP LH I I I+ A+
Sbjct: 80 VAYSQS--GMEVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIACGDSHCLAV 135
Query: 251 SAEGHLYTWGR------GFNSTSD--VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
+ EG + +WGR G T D V G H +T DG++
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYG 195
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G +G L +R P E+V++ G K+ +A G H+ V+ + A+ T+GW
Sbjct: 196 WGWGRYGNLGLGDRTDRLVP-----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 250
Query: 363 GEHGQLGLGNTCDQIHP-KVVNLGDEF 388
++GQLG G+ D + P K+ L + F
Sbjct: 251 SKYGQLGHGDLEDHLIPHKLEALSNSF 277
Score = 240 (89.5 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 74/244 (30%), Positives = 119/244 (48%)
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
I+ G HS+ LL G+ V +G G+ GQLG R S Q++ L +IV ++
Sbjct: 20 ISAGASHSVALLS---GDIVCSWGRGEDGQLGHGDAEDRP-SPTQLS-ALDGHQIVSVTC 74
Query: 243 NGDRSAALSAEG-HLYTWG------RGFNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLV 293
D + A S G +Y+WG G ++SD+ + G +H L
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+A VTE
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHTAAVTE 189
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGSGFTYA 406
+ + WGWG +G LGLG+ D++ P +V + G E + R T + G+ +TY
Sbjct: 190 DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYG 249
Query: 407 ISRH 410
S++
Sbjct: 250 WSKY 253
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 41/156 (26%), Positives = 63/156 (40%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNST---SDVN-----CXXXXXXXXXXXXXXLG 287
+++ ISA S AL + + +WGRG + D G
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 288 WNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
+H + + G EV G G L PL + L G+++ QIA G
Sbjct: 76 ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-----LHGIRIKQIACGDS 130
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
H VT + +WG ++GQLGLG+T D + P+ +
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 369 (135.0 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 108/335 (32%), Positives = 157/335 (46%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GA--HVLALTSPSSVIGGKVFSW 96
G G+ G+LG G +++ + G+ H LA T+ G+VFSW
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GEVFSW 482
Query: 97 GRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G G G+LGHG YPK + G + +SAG+ HS V++ G L+T G+G F
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G+LG
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNGKLGH 596
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNCX 272
D R V P+V L + I + A S AL++ G +Y WG G +S+
Sbjct: 597 G-DTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654
Query: 273 X----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+G +H L L+ D EV G + G +ST P++ +
Sbjct: 655 RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG---NSTGPITKP-K 710
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTW 360
KVS LDG+ + QI+AG HS T +R ++ W
Sbjct: 711 KVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 235 (87.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 76/300 (25%), Positives = 131/300 (43%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G++G+LG GD + S+ K++ ++++ +++ L +V+ +G G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FN 264
+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 489 KLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTRPL 323
++ N G +H + L+ DG V GG +G L + +P
Sbjct: 547 DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKP- 605
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
+ + L G+ + ++ AG++ S +T + WG G LG G++ + PK++
Sbjct: 606 ----KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 222 (83.2 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 84/309 (27%), Positives = 138/309 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGCL 147
G V + G+GS G+LG G+ + K +TF + HR +I +S+ G + G +
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTF-EPHR-SIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F+ GDG +G+LGHG+ + P + K V ++ G RHS + +D ++Y +G
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED---GELYTWG 536
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN 264
G G+LG R++ P + + DI VG +S + ALS +G ++++G G N
Sbjct: 537 EGDFGRLGHGDSNSRNI--PTL---VKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 265 ST---SDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLG-GSHHGMLSDPE 315
D N + G L LT G+V G G+ G S
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS-- 649
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++ RP + + L +++ I+ G H ++ + + WG GQ G GN+
Sbjct: 650 EATALRP-----KLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 376 QI-HPKVVN 383
I PK V+
Sbjct: 705 PITKPKKVS 713
Score = 185 (70.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 60/228 (26%), Positives = 94/228 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED-----GEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD P + + + ++ G + SL L QVY +G G
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG ++ P++ L IV IS +LS + +Y WG
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWG 690
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L SST+ ++ L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGN--SSTQKYPKLIQ--GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VTE+ + TWG G+ G+LG G++ + P +V + N EV CGS T A+S+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVG---EVSCGSSHTIALSK 578
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/157 (30%), Positives = 67/157 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G +G+LG G + G LALTS G+V++
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST-----GQVYA 637
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+ G E AL PK + R I IS G +H +S ++ G+ +
Sbjct: 638 WGCGACLGCGSSEAT-ALRPKLIEELAATR--IVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G G+ + P KVS + QI+ G HSL
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 373 (136.4 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 109/335 (32%), Positives = 157/335 (46%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GA--HVLALTSPSSVIGGKVFSW 96
G G+ G+LG G +++ + G+ H LA T+ G+VFSW
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GEVFSW 482
Query: 97 GRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G G G+LGHG YPK + G + +SAG+ HS V++ G L+T G+G F
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G+LG
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNGKLGH 596
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNCX 272
D R V P+V L + I + A S AL++ G +Y WG G +S+
Sbjct: 597 G-DTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654
Query: 273 X----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+G +H L L+ D EV G + G +ST P++ +
Sbjct: 655 RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG---NSTGPITKP-K 710
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTW 360
KVS LDGV + QI+AG HS T +R ++ W
Sbjct: 711 KVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 306 (112.8 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 95/330 (28%), Positives = 142/330 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHD--EXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGK 92
V + G G+ G+LG G D +CG H +ALT G+
Sbjct: 4048 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGE 4102
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + +S G+ HS V+ G LFT G+
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGN 4160
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G+ + P +V++ + Q+ACG+ H++ + D G+ V+ FG G G+
Sbjct: 4161 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTD--GSMVWAFGDGDYGK 4218
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ +S PQ L I I ++ S AL+ +GH+YT+G+ G
Sbjct: 4219 LGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEG 4276
Query: 267 SDVNCXXXXX----XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N +G H L L+ G+V G + G L P
Sbjct: 4277 RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREP 4336
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ + L G + QI+AG HSA T
Sbjct: 4337 TLITV-----LQGKNIRQISAGRCHSAAWT 4361
Score = 290 (107.1 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 97/362 (26%), Positives = 156/362 (43%)
Query: 36 VWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR----NVMVPVAAPSFSQAQQVVCGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL-YTWGRG-FNSTSDVNC 271
G+ + LP+ L +I ++ + + A+S +G + + +G G + N
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4224
Query: 272 XXXXXXXXXXXXXXLGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPE-RVSS-TRP 322
+G V + LT DG V G ++ PE R + RP
Sbjct: 4225 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRP 4284
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++V L GV + IA GAEH+ ++ + WG GQLGLG+T P ++
Sbjct: 4285 -----QQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLI 4339
Query: 383 NL 384
+
Sbjct: 4340 TV 4341
Score = 284 (105.0 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 72/227 (31%), Positives = 111/227 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + +CG H +T+ GK+F
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD-----GKLF 4156
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS G + + GDG
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTVAVSTDGSMVWAFGDG 4214
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD VY FG +
Sbjct: 4215 DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKD---GHVYTFGQVSDRLI 4271
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I I+ + + ALS+ G +Y WG
Sbjct: 4272 GLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWG 4318
Score = 235 (87.8 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 76/300 (25%), Positives = 131/300 (43%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G++G+LG GD + S+ K++ ++++ +++ L +V+ +G G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FN 264
+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 489 KLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTRPL 323
++ N G +H + L+ DG V GG +G L + +P
Sbjct: 547 DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKP- 605
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
+ + L G+ + ++ AG++ S +T + WG G LG G++ + PK++
Sbjct: 606 ----KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 84/309 (27%), Positives = 138/309 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGCL 147
G V + G+GS G+LG G+ + K +TF + HR +I +S+ G + G +
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTF-EPHR-SIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F+ GDG +G+LGHG+ + P + K V ++ G RHS + +D ++Y +G
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED---GELYTWG 536
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN 264
G G+LG R++ P + + DI VG +S + ALS +G ++++G G N
Sbjct: 537 EGDFGRLGHGDSNSRNI--PTL---VKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 265 ST---SDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLG-GSHHGMLSDPE 315
D N + G L LT G+V G G+ G S
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS-- 649
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++ RP + + L +++ I+ G H ++ + + WG GQ G GN+
Sbjct: 650 EATALRP-----KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 376 QI-HPKVVN 383
I PK V+
Sbjct: 705 PITKPKKVS 713
Score = 188 (71.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 61/228 (26%), Positives = 94/228 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED-----GEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD P + + + ++ G + SL L QVY +G G
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG ++ P++ L IV IS ALS + +Y WG
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Score = 173 (66.0 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 68/219 (31%), Positives = 102/219 (46%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLP------QVTIGLHDIEIVGISANGDRSAALSAEG 254
VY +G+G+ GQL ++ + V+ P QV G + V I ANG A EG
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPVAAPSFSQAQQVVCG-QNCTFV-IQANGTVLAC--GEG 4054
Query: 255 HLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL----GWN-HVLVLTGDGEVLMLGGSHHG 309
G+G NS D++ L G + H + LT GEV G +G
Sbjct: 4055 SYGRLGQG-NS-DDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L RP ++ L G +V+Q++ G +HSAVVT + + T+G G++G+LG
Sbjct: 4113 KLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLG 4167
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
LGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4168 LGNTSNKKLPERVTALEGYQIG----QVACGLNHTVAVS 4202
Score = 170 (64.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 64/222 (28%), Positives = 101/222 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ ACG H +A+++ S+ V+
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSM----VW 4209
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--- 151
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKVDILCG--IGIKKVACGTQFSVALTKDGHVYTFGQVS 4267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
D G L G R+H+ P +V + IA G H+L L G+ VY +GS G
Sbjct: 4268 DRLIG-LPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL--SSTGD-VYAWGSNSEG 4323
Query: 212 QLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
QLG+ + +R +L +T+ L I ISA SAA +A
Sbjct: 4324 QLGLGHTNHVREPTL--ITV-LQGKNIRQISAGRCHSAAWTA 4362
Score = 150 (57.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L SST+ ++ L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGN--SSTQKYPKLIQ--GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VTE+ + TWG G+ G+LG G++ + P +V + N EV CGS T A+S+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVG---EVSCGSSHTIALSK 578
Score = 148 (57.2 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 48/157 (30%), Positives = 68/157 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G +G+LG G + G LALTS G+V++
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST-----GQVYA 637
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+ G E AL PK + R I IS G +H +S ++ G+ +
Sbjct: 638 WGCGACLGCGSSEAT-ALRPKLIEELAATR--IVDISIGDSHCLALSHDNEVYAWGNNSM 694
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G G+ + P KVS ++ QI+ G HSL
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSL 731
Score = 90 (36.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
L G +V + G HG L++ R + P VA S Q+ G + V+
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGR-NVMVP--VAAPSFSQAQ-----QVVCGQNCTFVIQA 4044
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD-TQLEVFCGS-GFTYAIS 408
N ++ G G +G+LG GN+ D +H V+ + Q TQL CGS G + A++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNS-DDLH--VLTVISALQGFVVTQLVTSCGSDGHSMALT 4098
Score = 42 (19.8 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 35 KVWSWGAGTDGQLGTG 50
+V++WG + GQ G G
Sbjct: 685 EVYAWGNNSMGQCGQG 700
Score = 38 (18.4 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI-SAGWNHSGFVSDSGCL 147
W + +SGQ G+ + V+A K V GH IT + + ++ G SG L
Sbjct: 3721 WDQETSGQDGYRKAVEA---KCVFQLRGH---ITPVRTVAFSPDGLALVSGGL 3767
Score = 37 (18.1 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 23 KIXXXXXXQQVVKVWSWGAGT 43
KI +++VK+W++ G+
Sbjct: 3636 KILLTCAKEEMVKLWAYMGGS 3656
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 371 (135.7 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 108/335 (32%), Positives = 157/335 (46%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GA--HVLALTSPSSVIGGKVFSW 96
G G+ G+LG G +++ + G+ H LA T+ G+VFSW
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GEVFSW 482
Query: 97 GRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G G G+LGHG YPK + G + +SAG+ HS V++ G L+T G+G F
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G+LG
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNGKLGH 596
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNCX 272
D R V P+V L + I + A S AL++ G +Y WG G +S+
Sbjct: 597 G-DTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654
Query: 273 X----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+G +H L L+ D EV G + G +ST P++ +
Sbjct: 655 RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG---NSTGPITKP-K 710
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTW 360
KVS LDG+ + QI+AG HS T +R ++ W
Sbjct: 711 KVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 317 (116.6 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 98/328 (29%), Positives = 141/328 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHD--EXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGK 92
V + G G+ G+LG G D +CG H +ALT G+
Sbjct: 4043 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGE 4097
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + +S G+ HS V+ G LFT G+
Sbjct: 4098 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGN 4155
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G+ + P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+
Sbjct: 4156 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGK 4213
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD 268
LG+ +S PQ L I I ++ S AL+ +GH+YT+G+ G
Sbjct: 4214 LGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4271
Query: 269 VNCXXXXX----XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N +G H L L G+V G + G L P
Sbjct: 4272 RNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTL 4331
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V + L G V QI+AG HSA T
Sbjct: 4332 VTV-----LQGKNVRQISAGRCHSAAWT 4354
Score = 287 (106.1 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 95/360 (26%), Positives = 153/360 (42%)
Query: 36 VWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR CG + + G V
Sbjct: 3994 VYLWGAGRHGQLAEAGR----NVMVPAAAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4044
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4045 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4105 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4161
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL-YTWGRG-FNSTSDVNC 271
G+ + LP+ L +I ++ + + A+SA+G + + +G G + N
Sbjct: 4162 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219
Query: 272 XXXXXXXXXXXXXXLGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+G V + LT DG V G L + + RP
Sbjct: 4220 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4277
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4278 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Score = 278 (102.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 72/227 (31%), Positives = 114/227 (50%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + +CG H +TS GK+F
Sbjct: 4097 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-----GKLF 4151
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS D ++ GDG
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4209
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD G+ VY FG + +
Sbjct: 4210 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD--GH-VYTFGQDRL--I 4264
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I ++ + + AL++ G +Y WG
Sbjct: 4265 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4311
Score = 235 (87.8 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 76/300 (25%), Positives = 131/300 (43%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G++G+LG GD + S+ K++ ++++ +++ L +V+ +G G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FN 264
+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 489 KLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTRPL 323
++ N G +H + L+ DG V GG +G L + +P
Sbjct: 547 DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKP- 605
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
+ + L G+ + ++ AG++ S +T + WG G LG G++ + PK++
Sbjct: 606 ----KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 84/309 (27%), Positives = 138/309 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGCL 147
G V + G+GS G+LG G+ + K +TF + HR +I +S+ G + G +
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTF-EPHR-SIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F+ GDG +G+LGHG+ + P + K V ++ G RHS + +D ++Y +G
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED---GELYTWG 536
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN 264
G G+LG R++ P + + DI VG +S + ALS +G ++++G G N
Sbjct: 537 EGDFGRLGHGDSNSRNI--PTL---VKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 265 ST---SDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLG-GSHHGMLSDPE 315
D N + G L LT G+V G G+ G S
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS-- 649
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++ RP + + L +++ I+ G H ++ + + WG GQ G GN+
Sbjct: 650 EATALRP-----KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 376 QI-HPKVVN 383
I PK V+
Sbjct: 705 PITKPKKVS 713
Score = 213 (80.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 77/291 (26%), Positives = 132/291 (45%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3988 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4039
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES---G 4096
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V +S SA ++++G L+T+
Sbjct: 4097 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4153
Query: 260 GRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLM-LGGSHHGM 310
G G +TS+ + G NH L ++ DG ++ G +G
Sbjct: 4154 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4213
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L + + P +KV L G+ + ++A G + S +T++ + T+G
Sbjct: 4214 LGLGNSTAKSSP-----QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4259
Score = 188 (71.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 61/228 (26%), Positives = 94/228 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED-----GEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD P + + + ++ G + SL L QVY +G G
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG ++ P++ L IV IS ALS + +Y WG
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Score = 186 (70.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 69/285 (24%), Positives = 121/285 (42%)
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
W H G D ++ G G GQL R+ P SF Q+ CG + V+
Sbjct: 3986 W-HLGGKCD---VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQ 4038
Query: 195 KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ V G G G+LG + D + +++ G ++V + S AL+
Sbjct: 4039 AN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4095
Query: 254 GHLYTWGRG-FNSTSDVNCXXX-------XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G +++WG G + N G+ H V+T DG++ G
Sbjct: 4096 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4155
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGE 364
+G L + P E+V+ L+G ++ Q+A G H+ AV + + +G G+
Sbjct: 4156 GDYGRLGLGNTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4210
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+G+LGLGN+ + P+ V++ + +V CG+ F+ A+++
Sbjct: 4211 YGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4251
Score = 177 (67.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 61/219 (27%), Positives = 99/219 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ ACG H LA+++ S+ V+
Sbjct: 4149 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM----VW 4204
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 4205 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4262
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P ++ + +A G H+L L G+ VY +GS GQLG
Sbjct: 4263 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST--GD-VYAWGSNSEGQLG 4319
Query: 215 VSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ + +R +L VT+ L + ISA SAA +A
Sbjct: 4320 LGHTNHVREPTL--VTV-LQGKNVRQISAGRCHSAAWTA 4355
Score = 150 (57.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L SST+ ++ L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGN--SSTQKYPKLIQ--GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VTE+ + TWG G+ G+LG G++ + P +V + N EV CGS T A+S+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVG---EVSCGSSHTIALSK 578
Score = 144 (55.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/157 (30%), Positives = 67/157 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G +G+LG G + G LALTS G+V++
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST-----GQVYA 637
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+ G E AL PK + R I IS G +H +S ++ G+ +
Sbjct: 638 WGCGACLGCGSSEAT-ALRPKLIEELAATR--IVDISIGDSHCLALSHDNEVYAWGNNSM 694
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G G+ + P KVS + QI+ G HSL
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 42 (19.8 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 35 KVWSWGAGTDGQLGTG 50
+V++WG + GQ G G
Sbjct: 685 EVYAWGNNSMGQCGQG 700
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 371 (135.7 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 108/335 (32%), Positives = 157/335 (46%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GA--HVLALTSPSSVIGGKVFSW 96
G G+ G+LG G +++ + G+ H LA T+ G+VFSW
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GEVFSW 482
Query: 97 GRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G G G+LGHG YPK + G + +SAG+ HS V++ G L+T G+G F
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G+LG
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNGKLGH 596
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNCX 272
D R V P+V L + I + A S AL++ G +Y WG G +S+
Sbjct: 597 G-DTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654
Query: 273 X----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+G +H L L+ D EV G + G +ST P++ +
Sbjct: 655 RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG---NSTGPITKP-K 710
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTW 360
KVS LDG+ + QI+AG HS T +R ++ W
Sbjct: 711 KVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 317 (116.6 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 98/328 (29%), Positives = 141/328 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHD--EXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGK 92
V + G G+ G+LG G D +CG H +ALT G+
Sbjct: 4046 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGE 4100
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + +S G+ HS V+ G LFT G+
Sbjct: 4101 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGN 4158
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G+ + P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+
Sbjct: 4159 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGK 4216
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD 268
LG+ +S PQ L I I ++ S AL+ +GH+YT+G+ G
Sbjct: 4217 LGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4274
Query: 269 VNCXXXXX----XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N +G H L L G+V G + G L P
Sbjct: 4275 RNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTL 4334
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V + L G V QI+AG HSA T
Sbjct: 4335 VTV-----LQGKNVRQISAGRCHSAAWT 4357
Score = 287 (106.1 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 95/360 (26%), Positives = 153/360 (42%)
Query: 36 VWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR CG + + G V
Sbjct: 3997 VYLWGAGRHGQLAEAGR----NVMVPAAAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL-YTWGRG-FNSTSDVNC 271
G+ + LP+ L +I ++ + + A+SA+G + + +G G + N
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 272 XXXXXXXXXXXXXXLGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+G V + LT DG V G L + + RP
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 278 (102.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 72/227 (31%), Positives = 114/227 (50%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + +CG H +TS GK+F
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-----GKLF 4154
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS D ++ GDG
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4212
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD G+ VY FG + +
Sbjct: 4213 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD--GH-VYTFGQDRL--I 4267
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I ++ + + AL++ G +Y WG
Sbjct: 4268 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4314
Score = 235 (87.8 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 76/300 (25%), Positives = 131/300 (43%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G++G+LG GD + S+ K++ ++++ +++ L +V+ +G G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FN 264
+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 489 KLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTRPL 323
++ N G +H + L+ DG V GG +G L + +P
Sbjct: 547 DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKP- 605
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
+ + L G+ + ++ AG++ S +T + WG G LG G++ + PK++
Sbjct: 606 ----KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 224 (83.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 84/309 (27%), Positives = 138/309 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGCL 147
G V + G+GS G+LG G+ + K +TF + HR +I +S+ G + G +
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTF-EPHR-SIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F+ GDG +G+LGHG+ + P + K V ++ G RHS + +D ++Y +G
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED---GELYTWG 536
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN 264
G G+LG R++ P + + DI VG +S + ALS +G ++++G G N
Sbjct: 537 EGDFGRLGHGDSNSRNI--PTL---VKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 265 ST---SDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLG-GSHHGMLSDPE 315
D N + G L LT G+V G G+ G S
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS-- 649
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++ RP + + L +++ I+ G H ++ + + WG GQ G GN+
Sbjct: 650 EATALRP-----KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 376 QI-HPKVVN 383
I PK V+
Sbjct: 705 PITKPKKVS 713
Score = 213 (80.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 77/291 (26%), Positives = 132/291 (45%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3991 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4042
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES---G 4099
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V +S SA ++++G L+T+
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4156
Query: 260 GRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLM-LGGSHHGM 310
G G +TS+ + G NH L ++ DG ++ G +G
Sbjct: 4157 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L + + P +KV L G+ + ++A G + S +T++ + T+G
Sbjct: 4217 LGLGNSTAKSSP-----QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Score = 188 (71.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 61/228 (26%), Positives = 94/228 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED-----GEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD P + + + ++ G + SL L QVY +G G
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG ++ P++ L IV IS ALS + +Y WG
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWG 690
Score = 186 (70.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 69/285 (24%), Positives = 121/285 (42%)
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
W H G D ++ G G GQL R+ P SF Q+ CG + V+
Sbjct: 3989 W-HLGGKCD---VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQ 4041
Query: 195 KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ V G G G+LG + D + +++ G ++V + S AL+
Sbjct: 4042 AN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4098
Query: 254 GHLYTWGRG-FNSTSDVNCXXX-------XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G +++WG G + N G+ H V+T DG++ G
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4158
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGE 364
+G L + P E+V+ L+G ++ Q+A G H+ AV + + +G G+
Sbjct: 4159 GDYGRLGLGNTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4213
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+G+LGLGN+ + P+ V++ + +V CG+ F+ A+++
Sbjct: 4214 YGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4254
Score = 177 (67.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 61/219 (27%), Positives = 99/219 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ ACG H LA+++ S+ V+
Sbjct: 4152 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM----VW 4207
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4265
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P ++ + +A G H+L L G+ VY +GS GQLG
Sbjct: 4266 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST--GD-VYAWGSNSEGQLG 4322
Query: 215 VSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ + +R +L VT+ L + ISA SAA +A
Sbjct: 4323 LGHTNHVREPTL--VTV-LQGKNVRQISAGRCHSAAWTA 4358
Score = 150 (57.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L SST+ ++ L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGN--SSTQKYPKLIQ--GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VTE+ + TWG G+ G+LG G++ + P +V + N EV CGS T A+S+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVG---EVSCGSSHTIALSK 578
Score = 144 (55.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/157 (30%), Positives = 67/157 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G +G+LG G + G LALTS G+V++
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST-----GQVYA 637
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+ G E AL PK + R I IS G +H +S ++ G+ +
Sbjct: 638 WGCGACLGCGSSEAT-ALRPKLIEELAATR--IVDISIGDSHCLALSHDNEVYAWGNNSM 694
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G G+ + P KVS + QI+ G HSL
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 42 (19.8 bits), Expect = 4.6e-27, Sum P(2) = 4.6e-27
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 35 KVWSWGAGTDGQLGTG 50
+V++WG + GQ G G
Sbjct: 685 EVYAWGNNSMGQCGQG 700
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 371 (135.7 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 108/335 (32%), Positives = 157/335 (46%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GA--HVLALTSPSSVIGGKVFSW 96
G G+ G+LG G +++ + G+ H LA T+ G+VFSW
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GEVFSW 482
Query: 97 GRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G G G+LGHG YPK + G + +SAG+ HS V++ G L+T G+G F
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G+LG
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNGKLGH 596
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNCX 272
D R V P+V L + I + A S AL++ G +Y WG G +S+
Sbjct: 597 G-DTNR-VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL 654
Query: 273 X----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+G +H L L+ D EV G + G +ST P++ +
Sbjct: 655 RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG---NSTGPITKP-K 710
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTW 360
KVS LDG+ + QI+AG HS T +R ++ W
Sbjct: 711 KVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 319 (117.4 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 98/328 (29%), Positives = 145/328 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHD--EXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGK 92
V + G G+ G+LG G D +CG H +ALT G+
Sbjct: 4048 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGE 4102
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + +S G+ HS V+ G LFT G+
Sbjct: 4103 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGN 4160
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G+ + P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+
Sbjct: 4161 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGK 4218
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD 268
LG+ +S PQ L I I ++ S AL+ +GH+YT+G+ G
Sbjct: 4219 LGLGNSTAKSS--PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276
Query: 269 VNCXXXXX----XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N +G H L L +G+V G + G L + R +
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLG-LGHTNHVREPT 4335
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ V+ L G V QI+AG HSA T
Sbjct: 4336 L----VTGLQGKNVRQISAGRCHSAAWT 4359
Score = 291 (107.5 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 96/358 (26%), Positives = 153/358 (42%)
Query: 36 VWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR----NVMVPAAAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL-YTWGRG-FNSTSDVNC 271
G+ + LP+ L +I ++ + + A+SA+G + + +G G + N
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 272 XXXXXXXXXXXXXXLGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+G V + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 277 (102.6 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 71/227 (31%), Positives = 114/227 (50%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + +CG H +TS GK+F
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-----GKLF 4156
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS D ++ GDG
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4214
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP K+ + ++ACG + S+ L KD G+ VY FG + +
Sbjct: 4215 DYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD--GH-VYTFGQDRL--I 4269
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I ++ + + AL++ G +Y WG
Sbjct: 4270 GLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWG 4316
Score = 235 (87.8 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 76/300 (25%), Positives = 131/300 (43%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G++G+LG GD + S+ K++ ++++ +++ L +V+ +G G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FN 264
+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 489 KLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTRPL 323
++ N G +H + L+ DG V GG +G L + +P
Sbjct: 547 DSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKP- 605
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
+ + L G+ + ++ AG++ S +T + WG G LG G++ + PK++
Sbjct: 606 ----KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 223 (83.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 83/309 (26%), Positives = 138/309 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGCL 147
G V + G+GS G+LG G+ + K +TF + HR +I +S+ G + G +
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTF-EPHR-SIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F+ GDG +G+LGHG+ + P + K V ++ G RHS + +D ++Y +G
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED---GELYTWG 536
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN 264
G G+LG R++ P + + DI VG +S + ALS +G ++++G G N
Sbjct: 537 EGDFGRLGHGDSNSRNI--PTL---VKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 265 ST---SDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLG-GSHHGMLSDPE 315
D N + G L LT G+V G G+ G S
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS-- 649
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++ RP + + L +++ ++ G H ++ + + WG GQ G GN+
Sbjct: 650 EATALRP-----KLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 376 QI-HPKVVN 383
I PK V+
Sbjct: 705 PITKPKKVS 713
Score = 212 (79.7 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 76/291 (26%), Positives = 132/291 (45%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES---G 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V +S SA ++++G L+T+
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4158
Query: 260 GRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLM-LGGSHHGM 310
G G +TS+ + G NH L ++ DG ++ G +G
Sbjct: 4159 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L + + P +K+ L G+ + ++A G + S +T++ + T+G
Sbjct: 4219 LGLGNSTAKSSP-----QKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 187 (70.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 60/228 (26%), Positives = 94/228 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED-----GEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD P + + + ++ G + SL L QVY +G G
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--AC 643
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG ++ P++ L IV +S ALS + +Y WG
Sbjct: 644 LGCGSSEATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWG 690
Score = 185 (70.2 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 68/285 (23%), Positives = 121/285 (42%)
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
W H G D ++ G G GQL R+ P SF Q+ CG + V+
Sbjct: 3991 W-HLGGKCD---VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQ 4043
Query: 195 KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ V G G G+LG + D + +++ G ++V + S AL+
Sbjct: 4044 AN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4100
Query: 254 GHLYTWGRG-FNSTSDVNCXXX-------XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G +++WG G + N G+ H V+T DG++ G
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4160
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGE 364
+G L + P E+V+ L+G ++ Q+A G H+ AV + + +G G+
Sbjct: 4161 GDYGRLGLGNTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4215
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+G+LGLGN+ + P+ +++ + +V CG+ F+ A+++
Sbjct: 4216 YGKLGLGNSTAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 183 (69.5 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 59/218 (27%), Positives = 96/218 (44%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ ACG H LA+++ S+ V+
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM----VW 4209
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ + G I ++ G S ++ G ++T G
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKIDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4267
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P ++ + +A G H+L L + G+ VY +GS GQLG
Sbjct: 4268 LIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASN--GD-VYAWGSNSEGQLG 4324
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ V P + GL + ISA SAA +A
Sbjct: 4325 LG--HTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 150 (57.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L SST+ ++ L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGN--SSTQKYPKLIQ--GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VTE+ + TWG G+ G+LG G++ + P +V + N EV CGS T A+S+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVG---EVSCGSSHTIALSK 578
Score = 143 (55.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/157 (29%), Positives = 67/157 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G +G+LG G + G LALTS G+V++
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTST-----GQVYA 637
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+ G E AL PK + R I +S G +H +S ++ G+ +
Sbjct: 638 WGCGACLGCGSSEAT-ALRPKLIEELAATR--IVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G G+ + P KVS + QI+ G HSL
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 42 (19.8 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 35 KVWSWGAGTDGQLGTG 50
+V++WG + GQ G G
Sbjct: 685 EVYAWGNNSMGQCGQG 700
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 357 (130.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 107/336 (31%), Positives = 156/336 (46%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GA--HVLALTSPSSVIGGKVFSW 96
G G+ G+LG G +++ + G+ H LA T+ G+VFSW
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GEVFSW 482
Query: 97 GRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G G G+LGHG YPK + G + +SAG+ HS V++ G L+T G+G F
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR-GQLG 214
G+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G+LG
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNVGKLG 596
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNC 271
D R V P+V L + I + A S AL++ G +Y WG G +S+
Sbjct: 597 HG-DTNR-VYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATA 654
Query: 272 XX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+G +HV + D EV G + G +ST P++
Sbjct: 655 LRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQG---NSTGPITKP- 710
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTW 360
+KVS LDG+ + QI+AG HS T +R ++ W
Sbjct: 711 KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 746
Score = 316 (116.3 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 97/328 (29%), Positives = 141/328 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHD--EXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGK 92
V + G G+ G+LG G D +CG H +ALT G+
Sbjct: 4049 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGE 4103
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + +S G+ HS V+ G LFT G+
Sbjct: 4104 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGN 4161
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G+ + P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+
Sbjct: 4162 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGK 4219
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD 268
LG+ +S PQ L I I ++ S AL+ +GH+YT+G+ G
Sbjct: 4220 LGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4277
Query: 269 VNCXXXXX----XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N +G H L L G+V G + G L P
Sbjct: 4278 RNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTL 4337
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V + L G + QI+AG HSA T
Sbjct: 4338 VTV-----LQGKNIRQISAGRCHSAAWT 4360
Score = 278 (102.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 72/227 (31%), Positives = 114/227 (50%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + +CG H +TS GK+F
Sbjct: 4103 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-----GKLF 4157
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS D ++ GDG
Sbjct: 4158 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 4215
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD G+ VY FG + +
Sbjct: 4216 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD--GH-VYTFGQDRL--I 4270
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I ++ + + AL++ G +Y WG
Sbjct: 4271 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4317
Score = 232 (86.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 77/302 (25%), Positives = 133/302 (44%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+V+ WG SS QL G L PK ++F D I AG + +S G + C
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQT-----IEAGQYCTFVISTDGSVRAC 427
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G++G+LG GD + S+ K++ ++++ +++ L +V+ +G G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDY 487
Query: 211 GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------F 263
G+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 488 GKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 264 NSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML--GGSHHGMLSDPERVSSTR 321
++ N G +H + L+ DG + GG + G L + +
Sbjct: 546 GDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYK 605
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPK 380
P + V L G+ + ++ AG++ S +T + WG G LG G++ + PK
Sbjct: 606 P-----KVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPK 658
Query: 381 VV 382
++
Sbjct: 659 LI 660
Score = 214 (80.4 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 84/310 (27%), Positives = 137/310 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGCL 147
G V + G+GS G+LG G+ + K +TF + HR +I +S+ G + G +
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTF-EPHR-SIKKVSSSKGSDGHTLAFTTEGEV 479
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F+ GDG +G+LGHG+ + P + K V ++ G RHS + +D ++Y +G
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED---GELYTWG 536
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN 264
G G+LG R++ P + + DI VG +S + ALS +G ++++G G N
Sbjct: 537 EGDFGRLGHGDSNSRNI--PTL---VKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 265 ----STSDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLG-GSHHGMLSDP 314
D N + G L LT G+V G G+ G S
Sbjct: 592 VGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS- 650
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
++ RP + + L +++ I+ G H + + + WG GQ G GN+
Sbjct: 651 -EATALRP-----KLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNST 704
Query: 375 DQI-HPKVVN 383
I PK V+
Sbjct: 705 GPITKPKKVS 714
Score = 213 (80.0 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 77/291 (26%), Positives = 132/291 (45%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3994 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4045
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4046 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES---G 4102
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V +S SA ++++G L+T+
Sbjct: 4103 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 4159
Query: 260 GRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLM-LGGSHHGM 310
G G +TS+ + G NH L ++ DG ++ G +G
Sbjct: 4160 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4219
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L + + P +KV L G+ + ++A G + S +T++ + T+G
Sbjct: 4220 LGLGNSTAKSSP-----QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4265
Score = 186 (70.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 69/285 (24%), Positives = 121/285 (42%)
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
W H G D ++ G G GQL R+ P SF Q+ CG + V+
Sbjct: 3992 W-HLGGKCD---VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQ 4044
Query: 195 KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ V G G G+LG + D + +++ G ++V + S AL+
Sbjct: 4045 AN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 4101
Query: 254 GHLYTWGRG-FNSTSDVNCXXX-------XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G +++WG G + N G+ H V+T DG++ G
Sbjct: 4102 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4161
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGE 364
+G L + P E+V+ L+G ++ Q+A G H+ AV + + +G G+
Sbjct: 4162 GDYGRLGLGNTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 4216
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+G+LGLGN+ + P+ V++ + +V CG+ F+ A+++
Sbjct: 4217 YGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 4257
Score = 178 (67.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 62/219 (28%), Positives = 99/219 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ ACG H LA+++ S+ V+
Sbjct: 4155 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM----VW 4210
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 4211 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4268
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P ++ + +A G H+L L G+ VY +GS GQLG
Sbjct: 4269 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST--GD-VYAWGSNSEGQLG 4325
Query: 215 VSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ + +R +L VT+ L I ISA SAA +A
Sbjct: 4326 LGHTNHVREPTL--VTV-LQGKNIRQISAGRCHSAAWTA 4361
Score = 167 (63.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 62/230 (26%), Positives = 94/230 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTED-----GEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDISN----VGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 G-TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G G+LGHGD P V + + ++ G + SL L QVY +G G
Sbjct: 589 GDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTST---GQVYAWGCG--A 643
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA-EGHLYTWG 260
LG ++ P++ L IV IS GD L + +Y WG
Sbjct: 644 CLGCGSSEATALR-PKLIEELAATRIVDISI-GDSHVWLFVMDNEVYAWG 691
Score = 150 (57.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L SST+ ++ L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGN--SSTQKYPKLIQ--GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VTE+ + TWG G+ G+LG G++ + P +V + N EV CGS T A+S+
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVG---EVSCGSSHTIALSK 578
Score = 42 (19.8 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 35 KVWSWGAGTDGQLGTG 50
+V++WG + GQ G G
Sbjct: 686 EVYAWGNNSMGQCGQG 701
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 113/400 (28%), Positives = 167/400 (41%)
Query: 39 WGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGR 98
WG+G G+LG G L + ACGGAH L LT +VF+ G
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETR-----RVFATGL 108
Query: 99 GSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG ++ A+ P V+ D I HISAG+ HS ++ G L+ G + GQ
Sbjct: 109 NDCGQLGVSDVKSHAMDPLEVSGLDKD---ILHISAGYYHSAAITVDGELYMWGKNSSGQ 165
Query: 158 LGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
LG G + P KV + + +A G HS V + D G +V +G G G+LG
Sbjct: 166 LGLGKKAARVVRVPTKVEALHGITIQSVALGSEHS-VAVTD--GGEVLSWGGGGSGRLGH 222
Query: 216 SKDR-----IRSVS--LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
+RS S P++ L I++ ++A SA G + +G G
Sbjct: 223 GHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMG 282
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
F + G H V+T GE+ G + +G L S P
Sbjct: 283 FGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSP 342
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG-EHG-----------QLGL 370
+ V + L+ V Q++ G +H+A +++N + TWGWG HG QLG
Sbjct: 343 VRV---EGPFLEST-VSQVSCGWKHTAAISDNN-VFTWGWGGSHGTFSVDGHSSGGQLGH 397
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G+ D P +V+LG + + + CG T A+ H
Sbjct: 398 GSDVDYARPAMVDLGKNVR----AVHISCGFNHTAAVLEH 433
Score = 222 (83.2 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 55/175 (31%), Positives = 90/175 (51%)
Query: 91 GKVFS--WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
GK F+ WG G G+LG G + P + H +IT ++ G H+ F++++ +F
Sbjct: 47 GKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDH--SITAVACGGAHTLFLTETRRVF 104
Query: 149 TCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G GQLG D +SH+ P++VS ++K++ I+ G HS + D ++Y +G
Sbjct: 105 ATGLNDCGQLGVSDVKSHAMDPLEVSG-LDKDILHISAGYYHSAAITVD---GELYMWGK 160
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
GQLG+ K R V +P LH I I ++ + S A++ G + +WG G
Sbjct: 161 NSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGG 215
Score = 188 (71.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 73/297 (24%), Positives = 113/297 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G GQLG + + G H A+T + G+++
Sbjct: 102 RVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAIT-----VDGELY 156
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG+ SSGQLG G+ + P H TI ++ G HS V+D G + + G G
Sbjct: 157 MWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGG 216
Query: 155 FGQLGHGDY-------RSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
G+LGHG RS+S +P + V +A G+ HS D G+ + F
Sbjct: 217 SGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT--DENGS-AFMF 273
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G ++G +R+ + P + + E V + G + ++ G LYTWG N
Sbjct: 274 GEKSINKMGFGG--VRNATTPSIISEVPYAEEV--ACGGYHTCVVTRGGELYTWGSNENG 329
Query: 266 TSDVNCXXXXXX---------XXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHHGMLS 312
+ GW H ++ D V G G HG S
Sbjct: 330 CLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFS 385
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 329 (120.9 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 115/360 (31%), Positives = 165/360 (45%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG HV +T G+VF+WG G+LGHG VD PK V F I ++
Sbjct: 258 CGVRHVALVTRQ-----GEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA--LTNIDFVAC 310
Query: 134 GWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHS 190
G H+ VS SG LF+ GDG G LGHG SH P +VS V +ACG HS
Sbjct: 311 GEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHS 370
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN------- 243
+ + +++ FG G G LG +R SVS P+ L+ ++ V ++ +
Sbjct: 371 ALATAN---GKLFTFGDGAFGVLGHG-NR-ESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425
Query: 244 ----GDRSAALSAEGHLYTWGRGF-NSTSDVN--------CXXXXXXXXXXXXXXLGWNH 290
G + ++S+ L+TWG G N N C G
Sbjct: 426 VEVMGQTATSMSSR-KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIA-CGHTF 483
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT G V +GG+ HG L + +S + L ++ L G V +IA GA H AV
Sbjct: 484 TVALTTSGHVFTMGGTAHGQLGNS--ISDGK-LPCLVQ--DRLVGEFVEEIACGAHHVAV 538
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T + TWG G +G+LG G+T D+ P +V + ++R + + CGS FT +I H
Sbjct: 539 LTSRSEVFTWGKGANGRLGHGDTEDKRTPTLV---EALRDRHVK-SLSCGSNFTSSICIH 594
Score = 245 (91.3 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 85/309 (27%), Positives = 128/309 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D ACG H +++ G +F
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVST-----SGDLF 325
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
SWG G + G LGHG + PK V+ +G + + ++ G HS + +G LFT G
Sbjct: 326 SWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQ--VLSVACGTWHSALATANGKLFTFG 383
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DG FG LGHG+ S S P +V S ++AC + H+ +++ +++
Sbjct: 384 DGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFT 443
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---R 261
+G G + +LG + LP L D I+ + AL+ GH++T G
Sbjct: 444 WGDGDKNRLGHGNKE--TYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAH 501
Query: 262 GF--NSTSD--VNCXXXXXXXXXXXXX-XLGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G NS SD + C G +HV VLT EV G +G L +
Sbjct: 502 GQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDT 561
Query: 317 VSSTRPLSV 325
P V
Sbjct: 562 EDKRTPTLV 570
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 53/182 (29%), Positives = 80/182 (43%)
Query: 91 GKVFSWGR-GSSGQLGHG----EMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
G V+ WG + G L G E V D L P+P+ + I G H V+
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLE--SNVVLDVHQIVCGVRHVALVTR 268
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G +FT G+ G+LGHG S P V N+ +ACG H+ V+ ++
Sbjct: 269 QGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVV---STSGDLF 325
Query: 204 GFGSGKR--GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
+G G G LG D S +P+ G L ++++ ++ SA +A G L+T+G
Sbjct: 326 SWGDGIHNVGLLGHGSDI--SHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFG 383
Query: 261 RG 262
G
Sbjct: 384 DG 385
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 95/334 (28%), Positives = 155/334 (46%)
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
V + +WG G GQLG G + + V + Y++ + +G +S + D G +
Sbjct: 2 VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEP--YSVRSVVSGSRNSLAICDDGTM 59
Query: 148 FTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
FT G G LGH + ++ + P +V + N + Q A G H L + D G + Y +G
Sbjct: 60 FTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAV--DDQG-RAYAWG 116
Query: 207 SGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+ GQ G KD + R + +P+ + + ++A G S L+ EGH++TW
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAP--KLTVRQVAAGGTHSVVLTREGHVWTW 174
Query: 260 GRGF--NSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G+ + ++ +G H L L DG +L G + +G L
Sbjct: 175 GQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLG----T 230
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT--CD 375
T+P S + V LD + ++ IAAG HS +T+ + WG GEHG+LGLG+
Sbjct: 231 GDTQPTSHPVP-VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL E D ++V CG + A++R
Sbjct: 290 KMVPQKVNLLAE---EDI-IQVSCGGTHSVALTR 319
Score = 258 (95.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 96/351 (27%), Positives = 141/351 (40%)
Query: 38 SWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ G + LA+ G +F+WG
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDD-----GTMFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + T I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHQPETKTENIPSRVKALANVKITQAAIG-GW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSHSS-PVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE---GHVWTWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
Q D I+ +S+P GL ++ ++ + A + AL +G L WG G T
Sbjct: 176 --QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALEEDGRLLAWGNNEYGQLGT 230
Query: 267 SDVNCXXXXXXXXXXXXXXL------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
D L GW H LT GEV G HG L + S+
Sbjct: 231 GDTQPTSHPVPVQGLDDLTLVDIAAGGW-HSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ + +KV+ L +IQ++ G HS +T + I ++G G+HG+LG G
Sbjct: 290 KMVP---QKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 225 (84.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 83/311 (26%), Positives = 130/311 (41%)
Query: 36 VWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++WG G LG E A GG H LA+ G+ +
Sbjct: 59 MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ-----GRAY 113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFD-------GHRYTITHISAGWNHSGFVSDSGCL 147
+WG GQ G + D + +PV D + T+ ++AG HS ++ G +
Sbjct: 114 AWGGNEYGQCGEEPLKDEM-GRPVRR-DIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GD + S PV+V +NV IA G H+L L +D ++ +G+
Sbjct: 172 WTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALEED---GRLLAWGN 222
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
+ GQLG + S +P GL D+ +V I+A G S AL+ +G +Y WGRG +
Sbjct: 223 NEYGQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRL 280
Query: 265 -------STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
S+ V G H + LT DG + G HG L +V
Sbjct: 281 GLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKV 340
Query: 318 SSTRPLSVALE 328
++ +PL + ++
Sbjct: 341 TTGQPLELPIK 351
Score = 202 (76.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 66/235 (28%), Positives = 102/235 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXX-------XXXXXXACGGAHVLALTSPSS 87
+ ++WG GQ G L DE A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V++WG+ G++ P V + R I+ G H+ + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRL 217
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ +GQLG GD + S PV V + + IA G HS L +VYG+G
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ G+LG+ + S +PQ L + +I+ +S G S AL+ +G ++++GRG
Sbjct: 275 GEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329
Score = 151 (58.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 51/179 (28%), Positives = 77/179 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
++ +WG GQLGTG A GG H ALT G+V+
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK-----GEVY 270
Query: 95 SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGRG G+LG G+ + P+ V I +S G HS ++ G +F+ G
Sbjct: 271 GWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEE--DIIQVSCGGTHSVALTRDGRIFSFGR 328
Query: 153 GTFGQLGHGDYRSHSSP----VKV----SSFVNKNVHQ--------IACGMRHSLVLLK 195
G G+LG+G + P +K+ SF + + + IACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 324 (119.1 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 109/361 (30%), Positives = 153/361 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX--XXXXXXXXXACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTAT-----GK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P+ + Y I I G HS +SD G + + GD
Sbjct: 61 VYACGSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH D P V V K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS-C--GELYSWGSNIYG 173
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV S + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ + + G + LT +G V G +G L SS
Sbjct: 234 DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG--HGFSSNEM 291
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
L V L G + Q+A G H+ + +R + +G G GQLG +T + P+V
Sbjct: 292 LP---RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 298 (110.0 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 97/331 (29%), Positives = 155/331 (46%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G +++ WG S GQLG G + D L P + + + ++ G H+ F++ +G +
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT--AVQQVACGHRHTLFLTATGKV 61
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ CG + QLGH D + P+ + + + QI CG RHSL L D QV +G
Sbjct: 62 YACGSNDYSQLGH-DLPT-KRPLLIPELQDYVIIQICCGSRHSLAL-SDW--GQVLSWGD 116
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
GQLG + D+ V LP+V L +V I+ + S AL++ G LY+WG
Sbjct: 117 NDCGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 262 GFNSTSDV-NCXXXXXXXXXX----XXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G NS +D+ +C G NH +++ G V G ++ G L +
Sbjct: 176 GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE 235
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+ + P L+ + L GV+ + A G E S +T + T G G +GQLG G + ++
Sbjct: 236 TNRSYPTQ--LKTLRTL-GVRFV--ACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 290
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ P++V E T +V CG+ T A+
Sbjct: 291 MLPRMVM---ELMG-STITQVACGNRHTLAL 317
Score = 272 (100.8 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 69/200 (34%), Positives = 95/200 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXX---XXXACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D ACGG H L S S G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSF-LISKS----G 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG + S+ LPQV IG
Sbjct: 334 QLGTRSTK--SLMLPQVVIG 351
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 324 (119.1 bits), Expect = 6.5e-28, P = 6.5e-28
Identities = 111/361 (30%), Positives = 163/361 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-ITHI 131
ACGG H + +T G+ FSWG S G+LGHG VD+ +P D T I +
Sbjct: 314 ACGGQHAVLVTKQ-----GESFSWGEESEGRLGHG--VDSNIQQP-KLIDALNTTNIELV 365
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRH 189
+ G HS V+ SG L+T G G FG LGHG+ SH P +V+ F+ + +H IACG H
Sbjct: 366 ACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVN-FLLEGIHVSSIACGPYH 424
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLG--------VSK--DRIRSVSLPQVTIGL-HDIEIV 238
+ V+ Q++ FG G G LG + + D ++ + + G+ H +V
Sbjct: 425 TAVVTS---AGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 481
Query: 239 GISANGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNH 290
+ G S++ + G L+TWG G V G +
Sbjct: 482 EVMV-GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSL 540
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT G V +G +G L + T P V L V +IA GA H AV
Sbjct: 541 TVALTTSGHVYTMGSPVYGQLGNSHADGKT-PNRVE----GKLHKSFVEEIACGAYHVAV 595
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISR 409
+T + TWG G +G+LG G+ D+ P +V +D Q++ + CG+ FT A+
Sbjct: 596 LTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVE-----SLKDKQVKSIACGTNFTAAVCI 650
Query: 410 H 410
H
Sbjct: 651 H 651
Score = 292 (107.8 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 96/337 (28%), Positives = 145/337 (43%)
Query: 37 WSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + ACG H A+T + G +++W
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 384
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 385 GKGDFGVLGHGNEVSHWVPKRVNFLLEGIH--VSSIACGPYHTAVVTSAGQLFTFGDGTF 442
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK---------DCLGNQVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +C +++ +G
Sbjct: 443 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G +G+LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 503 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 262 GFNSTSD---VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D N G HV VLT EV G +G L +
Sbjct: 561 LGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V +L +V IA G +A V +R
Sbjct: 621 RNSPTLV-----ESLKDKQVKSIACGTNFTAAVCIHR 652
Score = 239 (89.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 76/241 (31%), Positives = 108/241 (44%)
Query: 36 VWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++WG G G LG G + ACG H +TS G++F
Sbjct: 381 LYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTS-----AGQLF 435
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV-------SDSGC- 146
++G G+ G LGHG+ P+ V G R T+ W+ + V S S C
Sbjct: 436 TFGDGTFGVLGHGDKKSVFIPREVDSLKGLR-TVRAACGVWHTAAVVEVMVGSSSSSNCS 494
Query: 147 ---LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
LFT GDG G+LGHG+ P V++ V N Q+ACG HSL + G+ VY
Sbjct: 495 SGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACG--HSLTVALTTSGH-VY 551
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
GS GQLG S ++ + +V LH + I+ A L++ +YTWG+G
Sbjct: 552 TMGSPVYGQLGNSHADGKTPN--RVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 609
Query: 264 N 264
N
Sbjct: 610 N 610
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 48/154 (31%), Positives = 71/154 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G + ACG + +ALT+ G V+
Sbjct: 497 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 551
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P V +G H+ + I+ G H ++ ++T G
Sbjct: 552 TMGSPVYGQLGNSH-ADGKTPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 608 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 51/182 (28%), Positives = 81/182 (44%)
Query: 91 GKVFSWGRG-SSGQLGHGEM---------VDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
G VF WG G G LG G +D+L PK + + +I+ G H+
Sbjct: 265 GDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALE--STIVLDVQNIACGGQHAVL 322
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
V+ G F+ G+ + G+LGHG + P + + N+ +ACG HS + L
Sbjct: 323 VTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT---LSG 379
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+Y +G G G LG + V +V L I + I+ +A +++ G L+T+G
Sbjct: 380 DLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFG 438
Query: 261 RG 262
G
Sbjct: 439 DG 440
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 323 (118.8 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 100/328 (30%), Positives = 151/328 (46%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQ G G + + P+P + H + ++ G NHS F+ + G ++TCG T
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH S P V + +++ +ACG HS V L D QV+ +G+G GQLG+
Sbjct: 64 GQLGHES--EGSKPAWVGTLAGQHIVHVACGESHS-VALSD--QGQVFSWGAGSDGQLGL 118
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----C 271
+ +V++P++ L+ I+ IS AL+A+G +TWG+ NS + C
Sbjct: 119 TTIE-DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ--NSYGQLGLGKEC 175
Query: 272 XXXXXXXXXXXXXXL-------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ G H L+ G V G + G L + P
Sbjct: 176 PSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCH 235
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVN 383
V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+
Sbjct: 236 VKL-----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290
Query: 384 L-GDEFQN----RDTQLEVFCGSGFTYA 406
L G E R L SG YA
Sbjct: 291 LMGSEVSQIACGRHHTLAFVPSSGMIYA 318
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 99/320 (30%), Positives = 136/320 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACGG H + L G+V++ G + GQLGH + P V G I H++
Sbjct: 40 ACGGNHSVFLLED-----GEVYTCGLNTKGQLGHES--EGSKPAWVGTLAGQH--IVHVA 90
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSL 191
G +HS +SD G +F+ G G+ GQLG + P + + + QI+CG H L
Sbjct: 91 CGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCL 150
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L D Q + +G GQLG+ K+ S + PQ L I + ++A G S ALS
Sbjct: 151 ALAAD---GQFFTWGQNSYGQLGLGKE-CPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 252 AEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
G ++ WG+ G + D C G H VLT G V
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGW 362
G G L P +V L G +V QIA G H+ A V + I +G
Sbjct: 267 GAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 363 GEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 322 GTRGQLGTGHTCNVKCPSPV 341
Score = 260 (96.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 62/179 (34%), Positives = 85/179 (47%)
Query: 37 WSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + A GGAH AL+ + G VF
Sbjct: 159 FTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ SSGQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH +P +V + V QIACG H+L + +Y FG G RGQLG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQLG 328
Score = 252 (93.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 79/233 (33%), Positives = 115/233 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXX--XXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
+V++ G T GQLG H+ ACG +H +AL+ G+
Sbjct: 54 EVYTCGLNTKGQLG----HESEGSKPAWVGTLAGQHIVHVACGESHSVALSDQ-----GQ 104
Query: 93 VFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTC 150
VFSWG GS GQLG + DA+ P+ + + + TI IS G W+ +D G FT
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLN--QQTILQISCGNWHCLALAAD-GQFFTW 161
Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G ++GQLG G + S +SP +V S + Q+A G HS L L V+G+G
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---SLSGAVFGWGKNS 218
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
GQLG+S +R R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 219 SGQLGLSDERDRE-SPCHVKL-LRSQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH + L DGEV G + G L S +P V L G ++ +A G
Sbjct: 42 GGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPAWVG-----TLAGQHIVHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL D + P+++ N+ T L++ CG+
Sbjct: 95 HSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK----LNQQTILQISCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 120 (47.3 bits), Expect = 0.00081, P = 0.00081
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV-PSS---GMIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G+ GQLG G + P PV
Sbjct: 319 FGCGTRGQLGTGHTCNVKCPSPV 341
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 322 (118.4 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 99/328 (30%), Positives = 151/328 (46%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQ G G + + P+P + H + ++ G NHS F+ + G ++TCG T
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH S P + + +++ +ACG HS V L D QV+ +G+G GQLG+
Sbjct: 64 GQLGHES--EGSKPEPIGALAGQHIVHVACGESHS-VALSD--QGQVFSWGAGSDGQLGL 118
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----C 271
+ +V++P++ L+ I+ IS AL+A+G +TWG+ NS + C
Sbjct: 119 TTIE-DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ--NSYGQLGLGKEC 175
Query: 272 XXXXXXXXXXXXXXL-------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ G H L+ G V G + G L + P
Sbjct: 176 PSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCH 235
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVN 383
V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+
Sbjct: 236 VKL-----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290
Query: 384 L-GDEFQN----RDTQLEVFCGSGFTYA 406
L G E R L SG YA
Sbjct: 291 LMGSEVSQIACGRHHTLAFVPSSGMIYA 318
Score = 315 (115.9 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 99/320 (30%), Positives = 138/320 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACGG H + L G+V++ G + GQLGH + P+P+ G I H++
Sbjct: 40 ACGGNHSVFLLED-----GEVYTCGLNTKGQLGHES--EGSKPEPIGALAGQH--IVHVA 90
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSL 191
G +HS +SD G +F+ G G+ GQLG + P + + + QI+CG H L
Sbjct: 91 CGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCL 150
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L D Q + +G GQLG+ K+ S + PQ L I + ++A G S ALS
Sbjct: 151 ALAAD---GQFFTWGQNSYGQLGLGKE-CPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 252 AEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
G ++ WG+ G + D C G H VLT G V
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGW 362
G G L P +V L G +V QIA G H+ A V + I +G
Sbjct: 267 GAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGC 321
Query: 363 GEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 322 GTRGQLGTGHTCNVKCPSPV 341
Score = 260 (96.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 62/179 (34%), Positives = 85/179 (47%)
Query: 37 WSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + A GGAH AL+ + G VF
Sbjct: 159 FTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ SSGQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH +P +V + V QIACG H+L + +Y FG G RGQLG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQLG 328
Score = 251 (93.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 79/233 (33%), Positives = 115/233 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXX--XXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
+V++ G T GQLG H+ ACG +H +AL+ G+
Sbjct: 54 EVYTCGLNTKGQLG----HESEGSKPEPIGALAGQHIVHVACGESHSVALSDQ-----GQ 104
Query: 93 VFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTC 150
VFSWG GS GQLG + DA+ P+ + + + TI IS G W+ +D G FT
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLN--QQTILQISCGNWHCLALAAD-GQFFTW 161
Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G ++GQLG G + S +SP +V S + Q+A G HS L L V+G+G
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---SLSGAVFGWGKNS 218
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
GQLG+S +R R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 219 SGQLGLSDERDRE-SPCHVKL-LRSQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 35/123 (28%), Positives = 56/123 (45%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH + L DGEV G + G L S P+ L G ++ +A G
Sbjct: 42 GGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEPIGA-------LAGQHIVHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL D + P+++ N+ T L++ CG+
Sbjct: 95 HSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK----LNQQTILQISCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 120 (47.3 bits), Expect = 0.00081, P = 0.00081
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV-PSS---GMIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G+ GQLG G + P PV
Sbjct: 319 FGCGTRGQLGTGHTCNVKCPSPV 341
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 324 (119.1 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 101/326 (30%), Positives = 143/326 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ A GG H LALT + GK
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT-----LDGK 3093
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3151
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3208
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + P L I +V I S AL+ G ++TWG+G
Sbjct: 3209 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Query: 267 SDVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
D + +G H L +T G+V G + HG + +P
Sbjct: 3267 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3326
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
AL V LD V V ++A G+ HS
Sbjct: 3327 ---AL--VIGLDAVFVNRVACGSSHS 3347
Score = 290 (107.1 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 91/333 (27%), Positives = 142/333 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G+ G+LG G A GG H LALT+ G+
Sbjct: 4102 KLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE-----GE 4156
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG G G+LGHG + PK V +G ++ I+ G HS ++ SG + T G
Sbjct: 4157 VYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACGSAHSAAITASGHVLTWGK 4214
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--GNQVYGFGSGKR 210
G +G+LGHGD P V + + IACG + L C+ + V+ +G G
Sbjct: 4215 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTL---CITDDDNVWSWGDGDY 4271
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN----- 264
G+LG + LP L + +V + S AL+ G +YTWG+G F+
Sbjct: 4272 GKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4329
Query: 265 STSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
S V + G H + + GEV G + G L D + RP
Sbjct: 4330 SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
VA L G ++++ G+ H+ ++ ++
Sbjct: 4390 RLVAA-----LQGKHIVKVTCGSAHTLALSTSQ 4417
Score = 280 (103.6 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 103/385 (26%), Positives = 159/385 (41%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V WG QLG G + GG+ L + S GKV++
Sbjct: 2988 VMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQD----GKVYA 3042
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLFTCGDG 153
G G++G+LG G + P + +Y + ++ +G H+ ++ G +F+ G+G
Sbjct: 3043 CGEGTNGRLGLGVTHNVPLPHQLPVL--RQYVVKKVAVHSGGKHALALTLDGKVFSWGEG 3100
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + P V + K + +ACG HS + ++Y +G G+ G+L
Sbjct: 3101 EDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLGEYGRL 3157
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG--------RG 262
G D + P++ L +V ++ G R A AL+ +G +++WG RG
Sbjct: 3158 GHG-DNTTQLK-PKLVTALAGRRVVQVAC-GSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3214
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ SD G L LT GEV G + L +P
Sbjct: 3215 GSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3274
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-V 381
+ + L G +VI +A GA H VT+ + WG +HGQ G GNT P V
Sbjct: 3275 -----QPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALV 3329
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYA 406
+ L F NR V CGS + A
Sbjct: 3330 IGLDAVFVNR-----VACGSSHSIA 3349
Score = 279 (103.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 85/295 (28%), Positives = 123/295 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G ACG AH A+T+ G V
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4210
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS---GAVYTWGKGDFHRLG 4327
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXX 273
S D +R P+ L +I+ I+ A S G +YTWG N +
Sbjct: 4328 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGD--NDEGQLGDGT 4382
Query: 274 XXXXXXXXXXXXLGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
L H++ +T G L L S LS+ R PL L
Sbjct: 4383 VTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQ---LSERLRPLPNPPLEYDL 4434
Score = 260 (96.6 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 101/385 (26%), Positives = 159/385 (41%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG G GG L +P GK+F+
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPD----GKLFA 4105
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHG+ S+ P V +V IACG HS + G+ V +G G+ G+LG
Sbjct: 4166 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITAS--GH-VLTWGKGRYGRLGH 4222
Query: 216 --SKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWG--------RGFN 264
S+D++R L + +G I+I +GD ++ ++ + ++++WG RG +
Sbjct: 4223 GDSEDQLRP-KLVEALLGYRAIDIA--CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSSTRPL 323
+ G + LT G V G G H L RP
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH-RLGHGSVDHVRRP- 4337
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 4338 ----KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA 4393
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4394 A---LQGKHI-VKVTCGSAHTLALS 4414
Score = 248 (92.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 91/314 (28%), Positives = 133/314 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHI 131
A +H A +P + V WG QLG G + K TF R HI
Sbjct: 2968 AVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-G--LKGSKVKVPTFSQTISRLRPIHI 3024
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS----HSSPVKVSSFVNKNVHQIACGM 187
+ G VS G ++ CG+GT G+LG G + H PV + +V K V + G
Sbjct: 3025 AGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPV-LRQYVVKKV-AVHSGG 3082
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
+H+L L D +V+ +G G+ G+LG +R ++ P++ L +I ++ S
Sbjct: 3083 KHALALTLD---GKVFSWGEGEDGKLGHG-NRT-TLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 248 AALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWN--HVLVLTGD 297
AA+S++G LYTWG G N+T G L LT D
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED 3197
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G V G G L S P ++ L G+ V+QI GA+ S +T +
Sbjct: 3198 GAVFSWGDGDFGKLGRGGSEGSDTP-----HEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 358 MTWGWGEHGQLGLG 371
TWG G++ +LG G
Sbjct: 3253 WTWGKGDYYRLGHG 3266
Score = 246 (91.7 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 63/226 (27%), Positives = 101/226 (44%)
Query: 37 WSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G D +LG G H CG ++ A+T GG + +W
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITC-----GGNLLTW 692
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G +F GDG +G
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK-RGQLGV 215
+LG+G+ P+ V S V ++ G + S+ L + Q+Y +G G V
Sbjct: 753 KLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQLV 807
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ ++ S+P++ L IV ++ + ALS+ G ++ WGR
Sbjct: 808 ERS-VQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR 852
Score = 174 (66.3 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 63/259 (24%), Positives = 120/259 (46%)
Query: 168 SPVKVSSFVN-----KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
S VKV +F + +H IA G + ++ +D +VY G G G+LG+ +
Sbjct: 3005 SKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQD---GKVYACGEGTNGRLGLGVTH--N 3058
Query: 223 VSLP-QVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--------STSDVNCX 272
V LP Q+ + + ++ V + + G + AL+ +G +++WG G + +T D
Sbjct: 3059 VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRL 3118
Query: 273 XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
G +H ++ GE+ G +G L + + +P + V+
Sbjct: 3119 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP-----KLVTA 3173
Query: 333 LDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L G +V+Q+A G+ + +TE+ A+ +WG G+ G+LG G + P + E +
Sbjct: 3174 LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI----ERLS 3229
Query: 391 RDTQLEVFCGSGFTYAISR 409
+++ CG+ F+ A++R
Sbjct: 3230 GIGVVQIECGAQFSLALTR 3248
Score = 168 (64.2 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 59/233 (25%), Positives = 106/233 (45%)
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV-YGFG 206
++ G G +LGHGD + + P K+++ V + CG +S + C GN + +G G
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT--CGGNLLTWGRG 695
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS-ANGD-RSAALSAEGHLYTWGRG-F 263
+ R G S DR SLP + + L D +V ++ +GD S AL++EG ++ WG G +
Sbjct: 696 TYARLGHGNSDDR----SLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 264 NSTSDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLGGSH---HGMLSDPE 315
+ NC + G + L+ +G++ G + H ++ E
Sbjct: 752 GKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLV---E 808
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
R S + SV VS+L +++ +A H ++ + + WG + Q+
Sbjct: 809 R--SVQGCSVP-RLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 156 (60.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 70/279 (25%), Positives = 119/279 (42%)
Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
++ G GQLG G +P + S + + V Q+A G + + D +++
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLL-RPV-QLAGGEQSLFAVTPD---GKLFA 4105
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGRG 262
G G G+LGV S ++P + L + + V +++ G AL+ EG +Y WG G
Sbjct: 4106 TGYGSGGRLGVGGSD--SWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG 4163
Query: 263 F-------NSTS-DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
N S D G H +T G VL G +G L
Sbjct: 4164 EDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHG 4223
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ RP + V L G + I IA G+ + +T++ + +WG G++G+LG G
Sbjct: 4224 DSEDQLRP-----KLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4278
Query: 373 T--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ C ++ K+ +L ++V CGS F+ A+++
Sbjct: 4279 SDGC-KLPYKIESLAGL-----GVVKVECGSQFSVALTK 4311
Score = 63 (27.2 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 40/165 (24%), Positives = 64/165 (38%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + G +AL+S G++++
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA--GSQFSVALSSE-----GQLYT 795
Query: 96 WGRGSSGQLGHGEMVD-----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
WG+ + LGH ++V+ P+ V+ R I ++ H +S SG +F
Sbjct: 796 WGKATC--LGH-QLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGW 850
Query: 151 GDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLV 192
G Q+ S +P+ VS IAC SLV
Sbjct: 851 GRNDSQQICPASVSSEPLLRTPILVS-LPTFPASGIACTSAQSLV 894
Score = 57 (25.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/53 (24%), Positives = 21/53 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSS 87
+V++WG GQ G+G ACG +H +A P++
Sbjct: 3303 QVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIAWGLPNA 3355
Score = 40 (19.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
G + GH M D L + +G + + H+ + S C CGDG
Sbjct: 1033 GQASSAGHRFMTDLLVSSLMA--EGG------LESALQHAIRLESSSCSADCGDG 1079
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
+V+G + G G++G HGE+ LY V
Sbjct: 1876 TVLGLLAQTGGEGATGGQVHGEL-SILYEDSV 1906
Score = 38 (18.4 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 37 WSWGAGTDGQLGTGRLHDE 55
W WG G GR+ E
Sbjct: 1937 WKWGDQDGNPPGEGRIISE 1955
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 313 (115.2 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 100/321 (31%), Positives = 139/321 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHI 131
ACGG H + L G+V++ G + GQLGH + P+ + D H I H+
Sbjct: 40 ACGGDHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQIGALADEH---IVHV 89
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G +HS +SD G LF+ G G+ GQLG S + P + + + Q++CG H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D Q + +G GQLG+ K+ S + PQ L I + ++A G S AL
Sbjct: 150 LALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 251 SAEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
S G ++ WG G + D C G H VLT G V
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWG 361
G G L P +V L G +V QIA G +H+ A V + I +G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 321 CGARGQLGTGHTCNVKCPSPV 341
Score = 301 (111.0 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 96/323 (29%), Positives = 153/323 (47%)
Query: 96 WGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ G + + +P V F R ++ ++ G +HS F+ + G ++TCG T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGDHSVFLLEDGEVYTCGLNT 62
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH R + P ++ + ++++ +ACG HSL L D Q++ +G+G GQLG
Sbjct: 63 KGQLGHE--REGNKPEQIGALADEHIVHVACGESHSLAL-SD--RGQLFSWGAGSDGQLG 117
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNST 266
+ SV++P++ L+ I+ +S AL+A+G +TWG+ G
Sbjct: 118 LMTTE-ESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176
Query: 267 SDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S + G H L+ G V G ++ G L + P V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNL 384
L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+ L
Sbjct: 237 KL-----LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 385 -GDEFQNRDTQLEVFCGSGFTYA 406
G E TQ+ CG T A
Sbjct: 292 MGSEV----TQIA--CGRQHTLA 308
Score = 258 (95.9 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 67/211 (31%), Positives = 94/211 (44%)
Query: 37 WSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + A GGAH AL+ + G VF
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH +P +V + V QIACG +H+L + +Y FG G RGQLG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQLGT 329
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+V P G +SA DR
Sbjct: 330 G--HTCNVKCPSPVKGYWAAHSGQLSARADR 358
Score = 236 (88.1 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 75/231 (32%), Positives = 113/231 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G T GQLG R + ACG +H LAL+ G++F
Sbjct: 54 EVYTCGLNTKGQLGHER--EGNKPEQIGALADEHIVHVACGESHSLALSDR-----GQLF 106
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGD 152
SWG GS GQLG +++ P+ + + + TI +S G W+ +D G FT G
Sbjct: 107 SWGAGSDGQLGLMTTEESVAVPRLIQKLN--QQTILQVSCGNWHCLALAAD-GQFFTWGK 163
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L V+G+G G
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG+S + R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 221 QLGLSDEEDRE-SPCHVKL-LRAQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H + L DGEV G + G L ER +P E++ L ++ +A G
Sbjct: 42 GGDHSVFLLEDGEVYTCGLNTKGQLGH-ER-EGNKP-----EQIGALADEHIVHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL T + + P+++ + N+ T L+V CG+
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLI----QKLNQQTILQVSCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-PSS---GLIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G G+ GQLG G + P PV ++ H ++ + + + V +F+ GD T
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH-IVKQ---IFSGGDQT 374
Query: 155 F 155
F
Sbjct: 375 F 375
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/329 (28%), Positives = 147/329 (44%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V +WG G GQLG G + V + + + + G +S + D G LFT G
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEP--FNVRSVVGGSRNSLAICDDGKLFTWGW 64
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G LGH + ++ S+P V S N + Q A G H L + D G + Y +G + G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAV--DDQG-RAYAWGGNEYG 121
Query: 212 QLGV--SKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
Q G SKD R + +P+ + + ++A G S L+ EG+++TWG+ +
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREGYVWTWGQPWP 179
Query: 264 -NSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ +G H L L DG + G + +G L T+P
Sbjct: 180 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG----TGDTQP 235
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT--CDQIHPK 380
S + V LD + ++ IAAG HS +T + WG GEHG+LG G+ ++ P+
Sbjct: 236 RSYPIP-VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQ 294
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
VNL D ++V CG + A++R
Sbjct: 295 KVNL---LAGEDI-IQVSCGGTHSVALTR 319
Score = 274 (101.5 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 99/353 (28%), Positives = 146/353 (41%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V +WG+G DGQLG G ++ G + LA+ GK+F+
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDD-----GKLFT 61
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G LGH E P V + I GW H V D G + G
Sbjct: 62 WGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIG-GW-HCLAVDDQGRAYAWGGNE 119
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+GQ G + + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWTWG- 175
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFN 264
Q D I+ +S+P GL ++ ++ + A + AL +G L+ WG G
Sbjct: 176 ----QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQL 228
Query: 265 STSDVNCXXXXXXXXXXXXXXL------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T D L GW H LT +GEV G HG L +
Sbjct: 229 GTGDTQPRSYPIPVQGLDDLTLVDIAAGGW-HSTALTNEGEVYGWGRGEHGRLGFGDNDK 287
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
S++ L +KV+ L G +IQ++ G HS +T + I ++G G+HG+LG G
Sbjct: 288 SSKMLP---QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 87/313 (27%), Positives = 130/313 (41%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
K+++WG G LG E A GG H LA+ G+
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQ-----GRA 112
Query: 94 FSWGRGSSGQLGH-------GEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
++WG GQ G G V D + PK + T+ ++AG HS ++
Sbjct: 113 YAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA----QQLTVRQVAAGGTHSVVLTRE 168
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++T G GD + S PV+V +NV IA G H+L L +D ++
Sbjct: 169 GYVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKED---GTLWA 219
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
+G+ + GQLG + RS +P GL D+ +V I+A G S AL+ EG +Y WGRG
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEH 277
Query: 263 ----FN----STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
F S+ + G H + LT DG + G HG L
Sbjct: 278 GRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Query: 315 ERVSSTRPLSVAL 327
+V++ +PL + +
Sbjct: 338 RKVTTGQPLELPI 350
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/178 (28%), Positives = 77/178 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLGTG A GG H ALT+ G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNE-----GEVYG 271
Query: 96 WGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WGRG G+LG G+ + P+ V G I +S G HS ++ G +F+ G G
Sbjct: 272 WGRGEHGRLGFGDNDKSSKMLPQKVNLLAGE--DIIQVSCGGTHSVALTRDGRIFSFGRG 329
Query: 154 TFGQLGHGDYRSHSSPVKVSSFV----NKNVH------------QIACGMRHSLVLLK 195
G+LG+G + P+++ + + H +ACG RH+L +++
Sbjct: 330 DHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 309 (113.8 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 97/327 (29%), Positives = 153/327 (46%)
Query: 96 WGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG T
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH R + P ++ + ++++ +ACG HSL L D Q++ +G+G GQLG
Sbjct: 63 KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLAL-SD--RGQLFSWGAGSDGQLG 117
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNST 266
+ SV++P++ L+ I+ +S AL+A+G +TWG+ G
Sbjct: 118 LMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176
Query: 267 SDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S + G H L+ G V G ++ G L + P V
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNL 384
L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+ L
Sbjct: 237 KLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL 291
Query: 385 -GDEFQN----RDTQLEVFCGSGFTYA 406
G E R L + SG YA
Sbjct: 292 MGSEVTQIACGRQHTLALVPSSGLIYA 318
Score = 308 (113.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 100/321 (31%), Positives = 140/321 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHI 131
ACGG H + L G+V++ G + GQLGH + P+ + D H I H+
Sbjct: 40 ACGGNHSVFLLED-----GEVYTCGVNTKGQLGHER--EGNKPEQIGALADQH---IIHV 89
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G +HS +SD G LF+ G G+ GQLG S + P + + + Q++CG H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D Q + +G GQLG+ K+ S + PQ L I + ++A G S AL
Sbjct: 150 LALAAD---GQFFTWGKNSHGQLGLGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 251 SAEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
S G ++ WG G + D C G H VLT G V
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWG 361
G G L P +V L G +V QIA G +H+ A+V + I +G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNP-----RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFG 320
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPV 341
Score = 255 (94.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 67/211 (31%), Positives = 95/211 (45%)
Query: 37 WSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + A GGAH AL+ + G VF
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQLG
Sbjct: 272 GQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQLGT 329
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+V P G +SA DR
Sbjct: 330 G--HTCNVKCPSPVKGHWAAHSGQLSARADR 358
Score = 244 (91.0 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 76/231 (32%), Positives = 114/231 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G T GQLG R + ACG +H LAL+ G++F
Sbjct: 54 EVYTCGVNTKGQLGHER--EGNKPEQIGALADQHIIHVACGESHSLALSDR-----GQLF 106
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGD 152
SWG GS GQLG D++ P+ + + + TI +S G W+ +D G FT G
Sbjct: 107 SWGAGSDGQLGLMTTEDSVAVPRLIQKLN--QQTILQVSCGNWHCLALAAD-GQFFTWGK 163
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L V+G+G G
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG+S ++ R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 221 QLGLSDEKDRE-SPCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 138 (53.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH + L DGEV G + G L ER +P E++ L +I +A G
Sbjct: 42 GGNHSVFLLEDGEVYTCGVNTKGQLGH-ER-EGNKP-----EQIGALADQHIIHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL T D + P+++ + N+ T L+V CG+
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLI----QKLNQQTILQVSCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LAL PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV-PSS---GLIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G+ GQLG G + P PV
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPV 341
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 310 (114.2 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 100/321 (31%), Positives = 139/321 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHI 131
ACGG H + L G+V++ G + GQLGH + P+ + D H I H+
Sbjct: 40 ACGGNHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQIGALADQH---IIHV 89
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G +HS +SD G LF+ G G+ GQLG S + P + + + Q++CG H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D Q + +G GQLG+ K+ S + PQ L I + ++A G S AL
Sbjct: 150 LALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 251 SAEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
S G ++ WG G + D C G H VLT G V
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWG 361
G G L P +V L G +V QIA G +H+ A V + I +G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 321 CGARGQLGTGHTCNVKCPSPV 341
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 96/323 (29%), Positives = 153/323 (47%)
Query: 96 WGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH R + P ++ + ++++ +ACG HSL L D Q++ +G+G GQLG
Sbjct: 63 KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLAL-SD--RGQLFSWGAGSDGQLG 117
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNST 266
+ SV++P++ L+ I+ +S AL+A+G +TWG+ G
Sbjct: 118 LMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176
Query: 267 SDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S + G H L+ G V G ++ G L + P V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNL 384
L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+ L
Sbjct: 237 KLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 385 -GDEFQNRDTQLEVFCGSGFTYA 406
G E TQ+ CG T A
Sbjct: 292 MGSEV----TQIA--CGRQHTLA 308
Score = 256 (95.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 67/211 (31%), Positives = 94/211 (44%)
Query: 37 WSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + A GGAH AL+ + G VF
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH +P +V + V QIACG +H+L + +Y FG G RGQLG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQLGT 329
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+V P G +SA DR
Sbjct: 330 G--HTCNVKCPSPVKGYWAAHSGQLSARADR 358
Score = 243 (90.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 76/231 (32%), Positives = 114/231 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G T GQLG R + ACG +H LAL+ G++F
Sbjct: 54 EVYTCGLNTKGQLGHER--EGNKPEQIGALADQHIIHVACGESHSLALSDR-----GQLF 106
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGD 152
SWG GS GQLG D++ P+ + + + TI +S G W+ +D G FT G
Sbjct: 107 SWGAGSDGQLGLMTTEDSVAVPRLIQKLN--QQTILQVSCGNWHCLALAAD-GQFFTWGK 163
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L V+G+G G
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG+S ++ R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 221 QLGLSDEKDRE-SPCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH + L DGEV G + G L ER +P E++ L +I +A G
Sbjct: 42 GGNHSVFLLEDGEVYTCGLNTKGQLGH-ER-EGNKP-----EQIGALADQHIIHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL T D + P+++ + N+ T L+V CG+
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLI----QKLNQQTILQVSCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-PSS---GLIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G G+ GQLG G + P PV ++ H ++ + + + V +F+ GD T
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH-IVKQ---IFSGGDQT 374
Query: 155 F 155
F
Sbjct: 375 F 375
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 309 (113.8 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 105/344 (30%), Positives = 137/344 (39%)
Query: 39 WGAGTDGQLGTGRLHDEXXXXXXX-XXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
WG+ GQLG G ACG H L L G V++ G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHD-----GSVYTCG 59
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLGH + P+ V D + I+ +S G HS V++ G +F G G GQ
Sbjct: 60 SNSCGQLGHDK--GGSRPELVGALDAQK--ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115
Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LG G P + + Q+ CG H + L KD Q++ +G GQLG+
Sbjct: 116 LGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKD---GQLFVWGENSSGQLGLG 172
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD-- 268
K ++S PQ L I + ISA GD S ALS G ++ WG+ G N D
Sbjct: 173 KGEPSTLS-PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231
Query: 269 VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
V C G H LT +G + G G L + PL
Sbjct: 232 VPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS--TRNEPLP---R 286
Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG 371
+V L G +V QIA G H+ A V I +G GQLG G
Sbjct: 287 RVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 276 (102.2 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 86/323 (26%), Positives = 139/323 (43%)
Query: 96 WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG +GQLG G +++ P+ FDG + ++ G HS F+ G ++TCG +
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRG--LKEVACGNQHSLFLLHDGSVYTCGSNS 62
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH + S P V + + + ++CG HSL + + QV+ +G+G GQLG
Sbjct: 63 CGQLGHD--KGGSRPELVGALDAQKISGVSCGQAHSLAVNEQ---GQVFAWGAGDGGQLG 117
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXX 274
+ +V +P++ L + I + ALS +G L+ WG NS+ +
Sbjct: 118 LGTAE-EAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGE--NSSGQLGLGKG 174
Query: 275 XXXXXX-----------XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
G +H L+ G V G + G L + P
Sbjct: 175 EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPC 234
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ L KV+ I+ G EH+A +T+ + T+G G GQLG +T ++ P+ V
Sbjct: 235 HIKF-----LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM 289
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
E + ++ CG T A
Sbjct: 290 ---ELMGTEVS-QIACGRNHTLA 308
Score = 265 (98.3 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 74/229 (32%), Positives = 113/229 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXA-CGGAHVLALTSPSSVIGGKV 93
+V++WGAG GQLG G + CG H +AL+ G++
Sbjct: 104 QVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKD-----GQL 158
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG SSGQLG G+ L P+P+ G +T ISAG +HS +S SG +F G
Sbjct: 159 FVWGENSSGQLGLGKGEPSTLSPQPLKSLCG--IPLTQISAGGDHSFALSFSGAVFGWGK 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG D + + P + ++ V I+CG H+ L K+ G ++ FG+G +GQ
Sbjct: 217 NSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKE--GG-LFTFGNGSKGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWG 260
LG D R+ LP+ + L E+ I+ + + A + + G +Y +G
Sbjct: 274 LG--HDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFG 320
Score = 242 (90.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 58/181 (32%), Positives = 84/181 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
+++ WG + GQLG G+ + GG H AL+ G V
Sbjct: 157 QLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS-----FSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ S+GQLG + D P + F + + +IS G H+ ++ G LFT G+G
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK--VVYISCGEEHTAALTKEGGLFTFGNG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH R+ P +V + V QIACG H+L + +Y FG +GQL
Sbjct: 270 SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPST--GLIYAFGCNTQGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 240 (89.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 93/334 (27%), Positives = 144/334 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
V++ G+ + GQLG HD+ +CG AH LA+ G+V
Sbjct: 55 VYTCGSNSCGQLG----HDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQ-----GQV 105
Query: 94 FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG G GQLG G +A+ P+ + HR I+ + G +H +S G LF G+
Sbjct: 106 FAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR--ISQVMCGNHHCIALSKDGQLFVWGE 163
Query: 153 GTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G S SP + S + QI+ G HS L V+G+G G
Sbjct: 164 NSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL---SFSGAVFGWGKNSAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
QLG++ ++ R+V P L ++V IS + +AAL+ EG L+T+G G +S
Sbjct: 221 QLGLNDEQDRAV--PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS 278
Query: 266 TSDVNCXXXXXXXXXXXXXXL--GWNHVLVLT-GDGEVLMLGGSHHGMLS--------DP 314
T + + G NH L G + G + G L P
Sbjct: 279 TRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSP 338
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
VS+ +PL + + + + +I +G +H+
Sbjct: 339 VPVSNIQPLCIG-NAYTRTEHCTIAKIHSGGDHN 371
Score = 223 (83.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 74/274 (27%), Positives = 122/274 (44%)
Query: 147 LFTC-GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+ C G GQLG G S P F + + ++ACG +HSL LL D VY
Sbjct: 1 MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHD---GSVYT 57
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS GQLG K R P++ L +I G+S S A++ +G ++ WG G
Sbjct: 58 CGSNSCGQLGHDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDG 113
Query: 265 S-----TSD----VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
T++ V G +H + L+ DG++ + G + G L
Sbjct: 114 GQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLG--- 170
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ P +++ + + +L G+ + QI+AG +HS ++ + A+ WG GQLGL + D
Sbjct: 171 -LGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQD 229
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P + +F + + CG T A+++
Sbjct: 230 RAVPCHI----KFLRSQKVVYISCGEEHTAALTK 259
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 309 (113.8 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 100/321 (31%), Positives = 138/321 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHI 131
ACGG H + L G+V++ G + GQLGH + P+ + D H I H+
Sbjct: 40 ACGGNHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQIGALADQH---IVHV 89
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G +HS +SD G LF+ G G+ GQLG S + P + + + Q++CG H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D Q + +G GQLG+ K+ S PQ L I + ++A G S AL
Sbjct: 150 LALAAD---GQFFTWGKNSHGQLGLGKEYPSQAS-PQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 251 SAEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
S G ++ WG G + D C G H VLT G V
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWG 361
G G L P +V L G +V QIA G +H+ A V + I +G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 321 CGAKGQLGTGHTCNVKCPSPV 341
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 96/323 (29%), Positives = 153/323 (47%)
Query: 96 WGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG T
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH R + P ++ + ++++ +ACG HSL L D Q++ +G+G GQLG
Sbjct: 63 KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLAL-SD--RGQLFSWGAGSDGQLG 117
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNST 266
+ SV++P++ L+ I+ +S AL+A+G +TWG+ G
Sbjct: 118 LMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP 176
Query: 267 SDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S + G H L+ G V G ++ G L + P V
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV 236
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNL 384
L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+ L
Sbjct: 237 KLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 385 -GDEFQNRDTQLEVFCGSGFTYA 406
G E TQ+ CG T A
Sbjct: 292 MGSEV----TQIA--CGRQHTLA 308
Score = 254 (94.5 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 66/211 (31%), Positives = 95/211 (45%)
Query: 37 WSWGAGTDGQLGTGRLH-DEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + + A GGAH AL+ + G VF
Sbjct: 159 FTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH +P +V + V QIACG +H+L + +Y FG G +GQLG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGAKGQLGT 329
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+V P G +SA DR
Sbjct: 330 G--HTCNVKCPSPVKGYWAAHSGQLSARADR 358
Score = 245 (91.3 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G T GQLG R + ACG +H LAL+ G++F
Sbjct: 54 EVYTCGLNTKGQLGHER--EGNKPEQIGALADQHIVHVACGESHSLALSDR-----GQLF 106
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGD 152
SWG GS GQLG D++ P+ + + + TI +S G W+ +D G FT G
Sbjct: 107 SWGAGSDGQLGLMTTEDSVAVPRLIQKLN--QQTILQVSCGNWHCLALAAD-GQFFTWGK 163
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G +Y S +SP +V S + Q+A G HS L L V+G+G G
Sbjct: 164 NSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLSGAVFGWGMNNAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG+S + R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 221 QLGLSDEEDRE-SPCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/123 (30%), Positives = 61/123 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH + L DGEV G + G L ER +P E++ L ++ +A G
Sbjct: 42 GGNHSVFLLEDGEVYTCGLNTKGQLGH-ER-EGNKP-----EQIGALADQHIVHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL T D + P+++ + N+ T L+V CG+
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLI----QKLNQQTILQVSCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 122 (48.0 bits), Expect = 0.00049, P = 0.00049
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-PSS---GLIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G G+ GQLG G + P PV ++ H ++ + + + V +F+ GD T
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH-IVKQ---IFSGGDQT 374
Query: 155 F 155
F
Sbjct: 375 F 375
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 316 (116.3 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 97/328 (29%), Positives = 141/328 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHD--EXXXXXXXXXXXXXXXXXACGG-AHVLALTSPSSVIGGK 92
V + G G+ G+LG G D +CG H +ALT G+
Sbjct: 3305 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGE 3359
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + +S G+ HS V+ G LFT G+
Sbjct: 3360 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGN 3417
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G+ + P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+
Sbjct: 3418 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGK 3475
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD 268
LG+ +S PQ L I I ++ S AL+ +GH+YT+G+ G
Sbjct: 3476 LGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3533
Query: 269 VNCXXXXX----XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N +G H L L G+V G + G L P
Sbjct: 3534 RNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTL 3593
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V + L G + QI+AG HSA T
Sbjct: 3594 VTV-----LQGKNIRQISAGRCHSAAWT 3616
Score = 278 (102.9 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 72/227 (31%), Positives = 114/227 (50%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + +CG H +TS GK+F
Sbjct: 3359 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD-----GKLF 3413
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS D ++ GDG
Sbjct: 3414 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 3471
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD G+ VY FG + +
Sbjct: 3472 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD--GH-VYTFGQDRL--I 3526
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I ++ + + AL++ G +Y WG
Sbjct: 3527 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 3573
Score = 213 (80.0 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 77/291 (26%), Positives = 132/291 (45%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3250 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 3301
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 3302 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES---G 3358
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V +S SA ++++G L+T+
Sbjct: 3359 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTF 3415
Query: 260 GRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLM-LGGSHHGM 310
G G +TS+ + G NH L ++ DG ++ G +G
Sbjct: 3416 GNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 3475
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L + + P +KV L G+ + ++A G + S +T++ + T+G
Sbjct: 3476 LGLGNSTAKSSP-----QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3521
Score = 186 (70.5 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 69/285 (24%), Positives = 121/285 (42%)
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
W H G D ++ G G GQL R+ P SF Q+ CG + V+
Sbjct: 3248 W-HLGGKCD---VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQ 3300
Query: 195 KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ V G G G+LG + D + +++ G ++V + S AL+
Sbjct: 3301 AN---GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTES 3357
Query: 254 GHLYTWGRG-FNSTSDVNCXXX-------XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G +++WG G + N G+ H V+T DG++ G
Sbjct: 3358 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN 3417
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGE 364
+G L + P E+V+ L+G ++ Q+A G H+ AV + + +G G+
Sbjct: 3418 GDYGRLGLGNTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGD 3472
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+G+LGLGN+ + P+ V++ + +V CG+ F+ A+++
Sbjct: 3473 YGKLGLGNSTAKSSPQKVDVLCGIGIK----KVACGTQFSVALTK 3513
Score = 178 (67.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 62/219 (28%), Positives = 99/219 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ ACG H LA+++ S+ V+
Sbjct: 3411 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM----VW 3466
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 3467 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 3524
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P ++ + +A G H+L L G+ VY +GS GQLG
Sbjct: 3525 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALAST--GD-VYAWGSNSEGQLG 3581
Query: 215 VSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ + +R +L VT+ L I ISA SAA +A
Sbjct: 3582 LGHTNHVREPTL--VTV-LQGKNIRQISAGRCHSAAWTA 3617
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 308 (113.5 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 88/287 (30%), Positives = 134/287 (46%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 235 (87.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 71/229 (31%), Positives = 109/229 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V++ G +GQLG G + G++ TS + G++F
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSN----TSAALTEDGRLFM 163
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQ+G + + P+ VT G ++ IS G+ HS FV+ G L+ G+
Sbjct: 164 WGDNSEGQIGLKNVSNVCVPQQVTI--GK--PVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 156 GQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LG + +H +P VS K V Q+ACG H++VL + N VY FG G+ GQL
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEK-VIQVACGGEHTVVLTE----NAVYTFGLGQFGQL 274
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ + S P+V + D I IS + +A ++ G +YT+G G
Sbjct: 275 GLGTFLFET-SEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDG 322
Score = 202 (76.2 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 77/310 (24%), Positives = 131/310 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H +T K++ +G + GQLG G P V + + +
Sbjct: 41 SCGDEHSAVVTG-----NNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLA--A 93
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSL 191
G NH+ ++ G ++ G GQLG GD ++ +S F +++ + Q++ G S
Sbjct: 94 CGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVGISANGDRSAAL 250
L +D +++ +G GQ+G+ + +V +PQ VTIG + IS SA +
Sbjct: 154 ALTED---GRLFMWGDNSEGQIGLKN--VSNVCVPQQVTIGK---PVSWISCGYYHSAFV 205
Query: 251 SAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL---------GWNHVLVLTGDGEVL 301
+ +G LY +G N + + G H +VLT + V
Sbjct: 206 TTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLT-ENAVY 264
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + T V + N+ + I+ G H+A++T+ + T+G
Sbjct: 265 TFGLGQFGQLGLGTFLFETSEPKV----IENIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 362 WGEHGQLGLG 371
G HG+LGLG
Sbjct: 321 DGRHGKLGLG 330
Score = 178 (67.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHI 131
ACGG H + LT + V+++G G GQLG G + + PK + TI++I
Sbjct: 249 ACGGEHTVVLTENA------VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYI 300
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRH 189
S G NH+ ++D G ++T GDG G+LG G ++ +H P S+F+ V +ACG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 190 SLV 192
+V
Sbjct: 361 MVV 363
Score = 153 (58.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 75/281 (26%), Positives = 113/281 (40%)
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
DSG +FT G F + G + F N ++CG HS V+ + N++
Sbjct: 10 DSGAVFTFGKSKFAENNPGKFW----------FKNDVPVHLSCGDEHSAVVTGN---NKL 56
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG-HLYTWGR 261
Y FGS GQLG+ ++S P L E V ++A G +S EG ++Y G
Sbjct: 57 YMFGSNNWGQLGLGSKS--AISKPTCVKALKP-EKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 262 ------GFNSTSDVNCXXXXXXXXXXXXX---XLGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G T + N G N LT DG + M G + G +
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIG 173
Query: 313 DPERVSSTR-PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ VS+ P V + G V I+ G HSA VT + + +G E+G+LGL
Sbjct: 174 -LKNVSNVCVPQQVTI-------GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLP 225
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
N H + L E + ++V CG T ++ + +
Sbjct: 226 NQLLGNH-RTPQLVSEIPEK--VIQVACGGEHTVVLTENAV 263
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 93 VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
DG G+LG G ++ +H P S+F+ V +ACG H +V F +
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVV------------FAAPH 368
Query: 210 RGQLG-VSKDRIRSVSLPQVT 229
RG + D I L T
Sbjct: 369 RGVAKEIEFDEINDTCLSVAT 389
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/193 (23%), Positives = 91/193 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + +CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSN--VCVPQQVTIGKPVSWISCGYYHSAFVTTD-----GELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S KV + ++ + I+CG H+ L+ D +G +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHT-ALITD-IG-LMYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLP 226
G+ + + +P
Sbjct: 328 GLGLENFTNHFIP 340
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 308 (113.5 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 100/321 (31%), Positives = 138/321 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHI 131
ACGG H + L G+V++ G + GQLGH + P+ + D H I H+
Sbjct: 40 ACGGNHSVFLLED-----GEVYTCGVNTKGQLGHER--EGNKPEQIGALADQH---IVHV 89
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G +HS +SD G LF+ G G+ GQLG S + P + + + Q++CG H
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D Q + +G GQLG+ K+ S + PQ L I + + A G S AL
Sbjct: 150 LALAAD---GQFFTWGRNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205
Query: 251 SAEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
S G ++ WG G + D C G H VLT G V
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWG 361
G G L P +V L G +V QIA G +H+ A V + I +G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 321 CGARGQLGTGHTCNVKCPSPV 341
Score = 305 (112.4 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 96/323 (29%), Positives = 153/323 (47%)
Query: 96 WGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG T
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCGVNT 62
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G GQLG
Sbjct: 63 KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDQ---GQLFSWGAGSDGQLG 117
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNST 266
+ SV++P++ L+ I+ +S AL+A+G +TWGR G
Sbjct: 118 LMTIE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP 176
Query: 267 SDVNCXXXXXXXXXXXXXXL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S + + G H L+ G V G ++ G L + P V
Sbjct: 177 SQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNL 384
L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+ V+ L
Sbjct: 237 KLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 385 -GDEFQNRDTQLEVFCGSGFTYA 406
G E TQ+ CG T A
Sbjct: 292 MGSEV----TQIA--CGRQHTLA 308
Score = 252 (93.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 66/211 (31%), Positives = 93/211 (44%)
Query: 37 WSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++WG + GQLG G+ + GGAH AL+ + G VF
Sbjct: 159 FTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS-----LSGAVFG 213
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G+
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGH +P +V + V QIACG +H+L + +Y FG G RGQLG
Sbjct: 272 GQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQLGT 329
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+V P G +SA DR
Sbjct: 330 G--HTCNVKCPSPVKGYWAAHSGQLSARADR 358
Score = 242 (90.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 75/231 (32%), Positives = 114/231 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G T GQLG R + ACG +H LAL+ G++F
Sbjct: 54 EVYTCGVNTKGQLGHER--EGNKPEQIGALADQHIVHVACGESHSLALSDQ-----GQLF 106
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGD 152
SWG GS GQLG + D++ P+ + + + TI +S G W+ +D G FT G
Sbjct: 107 SWGAGSDGQLGLMTIEDSVAVPRLIQKLN--QQTILQVSCGNWHCLALAAD-GQFFTWGR 163
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+ G HS L L V+G+G G
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL---SLSGAVFGWGMNNAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG+S ++ R S V + L ++V IS + +A L+ G ++T+G G
Sbjct: 221 QLGLSDEKDRE-SPCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH + L DGEV G + G L ER +P E++ L ++ +A G
Sbjct: 42 GGNHSVFLLEDGEVYTCGVNTKGQLGH-ER-EGNKP-----EQIGALADQHIVHVACGES 94
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HS +++ + +WG G GQLGL D + P+++ + N+ T L+V CG+
Sbjct: 95 HSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLI----QKLNQQTILQVSCGNWHCL 150
Query: 406 AIS 408
A++
Sbjct: 151 ALA 153
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 263 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-PSS---GLIYA 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G G+ GQLG G + P PV ++ H ++ + + + V +F+ GD T
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH-IVKQ---IFSGGDQT 374
Query: 155 F 155
F
Sbjct: 375 F 375
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 311 (114.5 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 96/329 (29%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV+S G T+G+LG G GG H ALT + G
Sbjct: 1821 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 1875
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 1876 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 1933
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 1934 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 1992
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 1993 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2050
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 2051 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 2110
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 2111 LV-----QGLEGQKITRVACGSSHSVAWT 2134
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 107/412 (25%), Positives = 173/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE +KG + +LI P + + KV+ WG QLG G +
Sbjct: 1742 EEDDKGSTGSLIRKKTPGLESTATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 1798
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV+S G ++G+LG G + P+ +T
Sbjct: 1799 SALNVVQVAGGSKSLFAVT-----VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSS 1853
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 1854 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 1913
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 1914 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 1969
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 1970 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT++
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDS 2084
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 2085 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 2132
Score = 289 (106.8 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 94/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 2779 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 2833
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 2834 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGK 2891
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V IACG + L CL + V+ +G G
Sbjct: 2892 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL---CLTDDDTVWSWGDGDY 2948
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 2949 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3006
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 3007 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3066
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 3067 RLVAA-----LQGKKVNRVACGSAHT 3087
Score = 244 (91.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 85/305 (27%), Positives = 131/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 2726 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 2783
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 2840
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 2841 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2897
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 2898 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 2957
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 2958 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3012
Query: 378 HPKVV 382
P+ V
Sbjct: 3013 RPRQV 3017
Score = 230 (86.0 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 102/389 (26%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 2728 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 2781
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 2782 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2841
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 2842 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 2898
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L ++ I+ +GD ++ L+ + +++WG RG
Sbjct: 2899 HSDSEDQLK----PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2954
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 2955 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 3012
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T P
Sbjct: 3013 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3066
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 3067 RLVAA---LQGKKVN-RVACGSAHTLAWS 3091
Score = 173 (66.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 69/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 2725 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 2781
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 2782 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 2839
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 2840 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 2899
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI IA G+ + +T++ + +WG G++G+LG G
Sbjct: 2900 SDSEDQLKP-----KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2954
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 2955 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 2988
Score = 54 (24.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 2086 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2135
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 311 (114.5 bits), Expect = 7.9e-26, P = 7.9e-26
Identities = 96/329 (29%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV+S G T+G+LG G GG H ALT + G
Sbjct: 1821 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 1875
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 1876 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 1933
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 1934 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 1992
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 1993 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2050
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 2051 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 2110
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 2111 LV-----QGLEGQKITRVACGSSHSVAWT 2134
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 107/412 (25%), Positives = 173/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE +KG + +LI P + + KV+ WG QLG G +
Sbjct: 1742 EEDDKGSTGSLIRKKTPGLESTATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 1798
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV+S G ++G+LG G + P+ +T
Sbjct: 1799 SALNVVQVAGGSKSLFAVT-----VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSS 1853
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 1854 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 1913
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 1914 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 1969
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 1970 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT++
Sbjct: 2030 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDS 2084
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 2085 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 2132
Score = 289 (106.8 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 94/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 2815 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 2869
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 2870 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGK 2927
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V IACG + L CL + V+ +G G
Sbjct: 2928 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL---CLTDDDTVWSWGDGDY 2984
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 2985 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3042
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 3043 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3102
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 3103 RLVAA-----LQGKKVNRVACGSAHT 3123
Score = 244 (91.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 85/305 (27%), Positives = 131/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 2762 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 2819
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 2876
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 2877 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2933
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 2934 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 2993
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 2994 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3048
Query: 378 HPKVV 382
P+ V
Sbjct: 3049 RPRQV 3053
Score = 230 (86.0 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 102/389 (26%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 2764 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 2817
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 2818 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2877
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 2878 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 2934
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L ++ I+ +GD ++ L+ + +++WG RG
Sbjct: 2935 HSDSEDQLK----PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2990
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 2991 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 3048
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T P
Sbjct: 3049 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3102
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 3103 RLVAA---LQGKKVN-RVACGSAHTLAWS 3127
Score = 173 (66.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 69/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 2761 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 2817
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 2818 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 2875
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 2876 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 2935
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI IA G+ + +T++ + +WG G++G+LG G
Sbjct: 2936 SDSEDQLKP-----KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2990
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 2991 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 3024
Score = 54 (24.1 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 2086 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2135
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 104/391 (26%), Positives = 161/391 (41%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+++WGA + GQLG G D+ GG AL S S G++
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDS----GELLV 94
Query: 96 WGRGSSGQLGHGEMVDALYPK--PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
G+ GQLG G ++ + + P+ F G + +S GW+ + ++ G + CG
Sbjct: 95 CGQNHKGQLGLGHTLEIMTFQTCPLPGF-GR---VQQVSCGWDFTIILTGDGLVLACGSN 150
Query: 154 TFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLV-LLKDCLGNQVYGFGSGKRG 211
FGQLG ++HS+ P+ + SF ++ V +A G+RH+L C+ G S +
Sbjct: 151 AFGQLGVSAEKTHSAEPLLLKSF-HEPVTSVAAGLRHALASTASGCVYQWGTGLSSHAKR 209
Query: 212 QLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN----ST 266
L S P + G + + A A L+ G L+ WG + S
Sbjct: 210 MLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISG 269
Query: 267 S-----DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP----ERV 317
S V GW H++ T G V G S++G L E+
Sbjct: 270 SLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQ 329
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
S L + +V L G QI+ G+EH+ V R + +WGW EHG G G+ D
Sbjct: 330 SCDEHLVRSPVEVKALFGAT--QISCGSEHNLAVVGGR-VFSWGWNEHGMCGDGSLQDIT 386
Query: 378 HPKVVN-LGDEFQNRDTQLEVFCGSGFTYAI 407
P+ + L D L + CG+G + A+
Sbjct: 387 QPQPIPALADA-----VALLIGCGAGHSMAL 412
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 311 (114.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 96/329 (29%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV+S G T+G+LG G GG H ALT + G
Sbjct: 2956 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 3010
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3011 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 3068
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3069 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3127
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 3128 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3185
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3186 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 3245
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3246 LV-----QGLEGQKITRVACGSSHSVAWT 3269
Score = 297 (109.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 107/412 (25%), Positives = 173/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE +KG + +LI P + + KV+ WG QLG G +
Sbjct: 2877 EEDDKGSTGSLIRKKTPGLESTATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 2933
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV+S G ++G+LG G + P+ +T
Sbjct: 2934 SALNVVQVAGGSKSLFAVT-----VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSS 2988
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 2989 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3048
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 3049 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 3104
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3105 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3164
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT++
Sbjct: 3165 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDS 3219
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3220 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3267
Score = 289 (106.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 94/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 3950 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4004
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 4005 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGK 4062
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V IACG + L CL + V+ +G G
Sbjct: 4063 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL---CLTDDDTVWSWGDGDY 4119
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4120 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4177
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 4178 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4237
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 4238 RLVAA-----LQGKKVNRVACGSAHT 4258
Score = 286 (105.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 86/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL + G+V+SWG G G+LGHG+ V PK ++ F G + + HI+
Sbjct: 450 GHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 504
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V +ACG + L
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D++++ + S AL+ +
Sbjct: 565 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD 621
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +Y+WG+G N T + V + G H L LT D EV G
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 681
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D RV T+P AL LD ++ IA G S
Sbjct: 682 NDQCQHFDTLRV--TKPEPTALP---GLDTKHIVGIACGPAQS 719
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 461 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 515
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 576 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 632
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 633 QRLGHGTEE--HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 244 (91.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 85/305 (27%), Positives = 131/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3954
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4011
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4012 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4068
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 4069 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4128
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4129 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4183
Query: 378 HPKVV 382
P+ V
Sbjct: 4184 RPRQV 4188
Score = 230 (86.0 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 102/389 (26%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3899 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 3952
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 4069
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L ++ I+ +GD ++ L+ + +++WG RG
Sbjct: 4070 HSDSEDQLK----PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4125
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4126 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4183
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T P
Sbjct: 4184 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4237
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 4238 RLVAA---LQGKKVN-RVACGSAHTLAWS 4262
Score = 193 (73.0 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CGDG G+LGHGD P +S+F K+V IACG +S + + ++Y +
Sbjct: 467 CGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE---GELYTW 521
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRGF 263
G G G+LG ++ P + GL ++++ ++ +GD ++ A++ G +++WG G
Sbjct: 522 GRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579
Query: 264 -----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
SD C + G + LT DG+V G D
Sbjct: 580 YGKLGRGGSD-GCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG------DN 632
Query: 315 ERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+R+ V K+ L G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 633 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 186 (70.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 68/271 (25%), Positives = 118/271 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ +VY
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN---GRVY--------TQA 422
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRG---------- 262
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 423 YNSDMLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 478
Query: 263 --FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L
Sbjct: 479 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 538
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 539 IPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 593
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 594 PKLI---EKLQDLDV-IKVRCGSQFSIALTK 620
Score = 173 (66.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 69/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 3952
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 3953 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4010
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4011 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4070
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI IA G+ + +T++ + +WG G++G+LG G
Sbjct: 4071 SDSEDQLKP-----KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4125
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4126 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4159
Score = 158 (60.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 66/257 (25%), Positives = 112/257 (43%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 429 APQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLGHG-DTV-PLEE 483
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD--VNCXX 273
P+V + +V I+ SAA++AEG LYTWGRG S+ D +
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Query: 274 XXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
G L +T +G+V G +G L P + EK+
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI--EKLQ 601
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++ + Q +
Sbjct: 602 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL---EGLQGK 655
Query: 392 DTQLEVFCGSGFTYAIS 408
++V GS A++
Sbjct: 656 KV-IDVAAGSTHCLALT 671
Score = 54 (24.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3221 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3270
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 311 (114.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 96/329 (29%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV+S G T+G+LG G GG H ALT + G
Sbjct: 3013 KVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 3067
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 3125
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3184
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 3185 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 3302
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3303 LV-----QGLEGQKITRVACGSSHSVAWT 3326
Score = 297 (109.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 107/412 (25%), Positives = 173/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE +KG + +LI P + + KV+ WG QLG G +
Sbjct: 2934 EEDDKGSTGSLIRKKTPGLESTATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 2990
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV+S G ++G+LG G + P+ +T
Sbjct: 2991 SALNVVQVAGGSKSLFAVT-----VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSS 3045
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 3046 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3105
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 3106 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 3161
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3162 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT++
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDS 3276
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3324
Score = 289 (106.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 94/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4007 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4061
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 4062 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGK 4119
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V IACG + L CL + V+ +G G
Sbjct: 4120 GRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTL---CLTDDDTVWSWGDGDY 4176
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4177 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 4235 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 4295 RLVAA-----LQGKKVNRVACGSAHT 4315
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 86/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL + G+V+SWG G G+LGHG+ V PK ++ F G + + HI+
Sbjct: 505 GHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V +ACG + L
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D++++ + S AL+ +
Sbjct: 620 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD 676
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +Y+WG+G N T + V + G H L LT D EV G
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D RV T+P AL LD ++ IA G S
Sbjct: 737 NDQCQHFDTLRV--TKPEPTALP---GLDSKHIVGIACGPAQS 774
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTEE--HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 244 (91.0 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 85/305 (27%), Positives = 131/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4185
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4186 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4240
Query: 378 HPKVV 382
P+ V
Sbjct: 4241 RPRQV 4245
Score = 230 (86.0 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 102/389 (26%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3956 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 4009
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 4126
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L ++ I+ +GD ++ L+ + +++WG RG
Sbjct: 4127 HSDSEDQLK----PKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4183 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4240
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T P
Sbjct: 4241 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 4295 RLVAA---LQGKKVN-RVACGSAHTLAWS 4319
Score = 193 (73.0 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CGDG G+LGHGD P +S+F K+V IACG +S + + ++Y +
Sbjct: 522 CGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE---GELYTW 576
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRGF 263
G G G+LG ++ P + GL ++++ ++ +GD ++ A++ G +++WG G
Sbjct: 577 GRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 264 -----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
SD C + G + LT DG+V G D
Sbjct: 635 YGKLGRGGSD-GCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG------DN 687
Query: 315 ERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+R+ V K+ L G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 186 (70.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 68/271 (25%), Positives = 118/271 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ +VY
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN---GRVY--------TQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRG---------- 262
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 478 YNSDMLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 263 --FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 593
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 594 IPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 649 PKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 173 (66.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 69/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 4009
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 4010 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4067
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4068 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4127
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI IA G+ + +T++ + +WG G++G+LG G
Sbjct: 4128 SDSEDQLKP-----KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4183 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4216
Score = 158 (60.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 66/257 (25%), Positives = 112/257 (43%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLGHG-DTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD--VNCXX 273
P+V + +V I+ SAA++AEG LYTWGRG S+ D +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 274 XXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
G L +T +G+V G +G L P + EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI--EKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++ + Q +
Sbjct: 657 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL---EGLQGK 710
Query: 392 DTQLEVFCGSGFTYAIS 408
++V GS A++
Sbjct: 711 KV-IDVAAGSTHCLALT 726
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3278 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 113/360 (31%), Positives = 164/360 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG H AL S G+VF+WG S G+LGHG D P+ + +I ++
Sbjct: 278 ACGVKHA-ALVSRQ----GEVFTWGEASGGRLGHGMGKDVTGPQLIESLAAT--SIDFVA 330
Query: 133 AGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRH 189
G H+ V+ +G ++T GDGT G LGHG SH P ++S + ++CG H
Sbjct: 331 CGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWH 390
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRI---RSV-SLPQV-TIGL-----HDIEIV 238
+ ++ Q++ FG G G LG K+ + R V SL + TI + H IV
Sbjct: 391 TALITST---GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIV 447
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNST---SDVNCXXX---XXXXXXXXXXXLGWNHVL 292
+ S+ S G L+TWG G S D + H L
Sbjct: 448 EVIVTHSSSSVSS--GKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSL 505
Query: 293 V--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
LT G+V +G + +G L +P P V +K++ D V+ +IA GA H AV
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPCLVE-DKLTK-DCVE--EIACGAYHVAV 560
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T + TWG G +G+LG G+ D+ P +V D + R + + CGS FT AI H
Sbjct: 561 LTSRNEVFTWGKGANGRLGHGDVEDRKAPTLV---DALKERHVK-NIACGSNFTAAICLH 616
Score = 246 (91.7 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 90/337 (26%), Positives = 142/337 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D ACG H A+T + G+++
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT-----MTGEIY 346
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAG-WNHSGFVSDSGCLFTC 150
+WG G+ +G LGHG V PK ++ +G + I +S G W H+ ++ +G LFT
Sbjct: 347 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQ--IASVSCGPW-HTALITSTGQLFTF 403
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--------GNQV 202
GDGTFG LGHGD + P +V S +ACG+ H+ +++ + ++
Sbjct: 404 GDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKL 463
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G + +LG R P L D ++ + L+ G +YT
Sbjct: 464 FTWGDGDKSRLGHGDKEPRLK--PTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGST 521
Query: 259 -WGRGFNSTSD--VNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ N +D + C G HV VLT EV G +G L
Sbjct: 522 VYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 581
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V K + VK IA G+ +A +
Sbjct: 582 DVEDRKAPTLVDALKERH---VK--NIACGSNFTAAI 613
Score = 174 (66.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 52/185 (28%), Positives = 87/185 (47%)
Query: 91 GKVFSWGR---------GSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
G V+ WG G+ +G+ G D L PKP+ + HI+ G H+
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLE--SNVVLDVHHIACGVKHAAL 286
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
VS G +FT G+ + G+LGHG + + P + S ++ +ACG H+ + +
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT---MTG 343
Query: 201 QVYGFGSGKR--GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLY 257
++Y +G G G LG D S +P+ G L ++I +S +A +++ G L+
Sbjct: 344 EIYTWGDGTHNAGLLGHGTDV--SHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLF 401
Query: 258 TWGRG 262
T+G G
Sbjct: 402 TFGDG 406
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 95/329 (28%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H ALT + G
Sbjct: 3012 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 3066
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 3124
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3183
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 3184 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 3301
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3302 LV-----QGLEGQKITRVACGSSHSVAWT 3325
Score = 291 (107.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 107/412 (25%), Positives = 172/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE EKG S +LI + + KV+ WG QLG G +
Sbjct: 2933 EEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 2989
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV++ G ++G+LG G + P+ +T
Sbjct: 2990 SALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSS 3044
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 3045 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3104
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 3105 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 3160
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3161 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3220
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT++
Sbjct: 3221 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDS 3275
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3323
Score = 289 (106.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 94/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4005 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4059
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 4060 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGK 4117
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V IACG + L CL + V+ +G G
Sbjct: 4118 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL---CLTDDDTVWSWGDGDY 4174
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4175 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 4233 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 4293 RLVAA-----LQGKKVNRVACGSAHT 4313
Score = 287 (106.1 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 87/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL + G+V+SWG G G+LGHG+ V PK ++ F G + + HI+
Sbjct: 504 GHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 558
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V +ACG + L
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D+++V + S AL+ +
Sbjct: 619 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD 675
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +Y+WG+G N T + V + G H L LT D EV G
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D RV T+P AL LD ++ IA G S
Sbjct: 736 NDQCQHFDTLRV--TKPEPAALP---GLDTKHIVGIACGPAQS 773
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTEE--HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 244 (91.0 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 85/305 (27%), Positives = 131/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4183
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4184 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4238
Query: 378 HPKVV 382
P+ V
Sbjct: 4239 RPRQV 4243
Score = 231 (86.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 103/389 (26%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3954 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 4007
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 4124
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L +V I+ +GD ++ L+ + +++WG RG
Sbjct: 4125 HSDSEDQLK----PKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4181 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4238
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T P
Sbjct: 4239 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 4293 RLVAA---LQGKKVN-RVACGSAHTLAWS 4317
Score = 192 (72.6 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CGDG G+LGHGD P +S+F K+V IACG +S + + ++Y +
Sbjct: 521 CGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE---GELYTW 575
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRGF 263
G G G+LG ++ P + GL ++++ ++ +GD ++ A++ G +++WG G
Sbjct: 576 GRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 264 -----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
SD C + G + LT DG+V G D
Sbjct: 634 YGKLGRGGSD-GCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG------DN 686
Query: 315 ERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+R+ V K+ L G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 687 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 191 (72.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 70/271 (25%), Positives = 118/271 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ +VY
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVY--------TQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRG---------- 262
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 477 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 263 --FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 592
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 IPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 647
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 PKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 172 (65.6 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 68/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 4007
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 4008 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4065
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4066 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4125
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +V+ IA G+ + +T++ + +WG G++G+LG G
Sbjct: 4126 SDSEDQLKP-----KLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4181 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4214
Score = 159 (61.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 67/263 (25%), Positives = 115/263 (43%)
Query: 163 YRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
Y S + +P V ++N+ +IA H L L +VY +G G G+LG D
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLGHG-DT 532
Query: 220 IRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD- 268
+ + P+V + +V I+ SAA++AEG LYTWGRG S+ D
Sbjct: 533 V-PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 269 -VNCXXXXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ G L +T +G+V G +G L P +
Sbjct: 592 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
EK+ +LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 652 --EKLQDLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL--- 703
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
+ Q + ++V GS A++
Sbjct: 704 EGLQGKKV-IDVAAGSTHCLALT 725
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3277 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 298 (110.0 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 107/362 (29%), Positives = 152/362 (41%)
Query: 39 WGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD-----GTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 269 -VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V G+
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GN 344
Query: 387 EF 388
F
Sbjct: 345 WF 346
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 58/181 (32%), Positives = 80/181 (44%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 204 (76.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 69/233 (29%), Positives = 104/233 (44%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG +DGQLG G ACG H LAL+ S +V
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----EV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG+ GQLG G + P+ + G + I+AG HS ++ SG +F G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFM--QIAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S + + I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + I+ ++A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/138 (33%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 94/304 (30%), Positives = 135/304 (44%)
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
S ++ +F+WG S GQLG G D L P+ + F R ++ I+ G HS V+D
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTD 66
Query: 144 SGCLFTCG---DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
G LF CG DG G LGH + + +P K S + Q+ACG +++L ++
Sbjct: 67 GGDLFVCGLNKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---G 120
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
QV GS GQLGV R V +PQ I LH ++V I+A + A +A G ++ WG
Sbjct: 121 QVLSCGSNSFGQLGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Query: 261 RGFNSTSDVNC---------------XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G S C G +H LT GEV + G
Sbjct: 179 TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ HG L++ ++ P+ +E KV I +G H TE + TWG ++
Sbjct: 239 NKHGQLANE---AAFLPVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 366 GQLG 369
GQLG
Sbjct: 295 GQLG 298
Score = 200 (75.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 75/291 (25%), Positives = 116/291 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGA-HVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G D Y P G I ++ GW+ + ++++G + +CG +
Sbjct: 72 VCGLNKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V IA G+RH++ + Q +G G G+
Sbjct: 130 FGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ-WGTGLASCGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
R G + + P GL + + + + A D SA+L+ G +Y WG N
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN 246
Query: 265 STSDV----NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGML 311
+ + GW H++ T G++ G + +G L
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 305 (112.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 95/329 (28%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H ALT + G
Sbjct: 3013 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 3067
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 3125
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3184
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 3185 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT 3302
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3303 LV-----QGLEGQKITRVACGSSHSVAWT 3326
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 93/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4008 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4062
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 4063 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAGGAHSACVTAAGDLYTWGK 4120
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V +ACG + L CL + V+ +G G
Sbjct: 4121 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL---CLTDDDTVWSWGDGDY 4177
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4178 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 4236 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 4296 RLVAA-----LQGKKVNRVACGSAHT 4316
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 107/412 (25%), Positives = 171/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE EKG S +LI + + KV+ WG QLG G +
Sbjct: 2934 EEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 2990
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV++ G ++G+LG G + P+ +T
Sbjct: 2991 SALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSS 3045
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 3046 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3105
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 3106 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 3161
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3162 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT+
Sbjct: 3222 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDA 3276
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3324
Score = 287 (106.1 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 87/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL + G+V+SWG G G+LGHG+ V PK ++ F G + + HI+
Sbjct: 505 GHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V +ACG + L
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D+++V + S AL+ +
Sbjct: 620 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD 676
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +Y+WG+G N T + V + G H L LT D EV G
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D RV T+P AL LD ++ IA G S
Sbjct: 737 NDQCQHFDTLRV--TKPEPAALP---GLDTKHIVGIACGPAQS 774
Score = 256 (95.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTEE--HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 244 (91.0 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 85/305 (27%), Positives = 131/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4012
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4070 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241
Query: 378 HPKVV 382
P+ V
Sbjct: 4242 RPRQV 4246
Score = 230 (86.0 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 102/389 (26%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3957 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 4010
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 4127
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L +V ++ +GD ++ L+ + +++WG RG
Sbjct: 4128 HSDSEDQLK----PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4184 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4241
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T P
Sbjct: 4242 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 4296 RLVAA---LQGKKVN-RVACGSAHTLAWS 4320
Score = 192 (72.6 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CGDG G+LGHGD P +S+F K+V IACG +S + + ++Y +
Sbjct: 522 CGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE---GELYTW 576
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRGF 263
G G G+LG ++ P + GL ++++ ++ +GD ++ A++ G +++WG G
Sbjct: 577 GRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 264 -----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
SD C + G + LT DG+V G D
Sbjct: 635 YGKLGRGGSD-GCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG------DN 687
Query: 315 ERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+R+ V K+ L G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 191 (72.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 70/271 (25%), Positives = 118/271 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ +VY
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVY--------TQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRG---------- 262
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 478 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 263 --FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 593
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 594 IPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 649 PKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 171 (65.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 67/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 4010
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 4011 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4068
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4069 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4128
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +V+ +A G+ + +T++ + +WG G++G+LG G
Sbjct: 4129 SDSEDQLKP-----KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4184 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4217
Score = 159 (61.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 67/263 (25%), Positives = 115/263 (43%)
Query: 163 YRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
Y S + +P V ++N+ +IA H L L +VY +G G G+LG D
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLGHG-DT 533
Query: 220 IRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD- 268
+ + P+V + +V I+ SAA++AEG LYTWGRG S+ D
Sbjct: 534 V-PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 269 -VNCXXXXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ G L +T +G+V G +G L P +
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
EK+ +LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 653 --EKLQDLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL--- 704
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
+ Q + ++V GS A++
Sbjct: 705 EGLQGKKV-IDVAAGSTHCLALT 726
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3278 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 305 (112.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 93/329 (28%), Positives = 142/329 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H +ALT + G
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VDG 3070
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K+FSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTWG 3128
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3187
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G +
Sbjct: 3188 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPT 3305
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3306 LV-----QGLEGQKITRVACGSSHSVAWT 3329
Score = 292 (107.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 96/328 (29%), Positives = 137/328 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4064
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + I+AG HS ++ +G LFT G
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAGGAHSACITAAGDLFTWGK 4122
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGHGD P V + V IACG + L CL + V+ +G G
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTL---CLTDDDTVWSWGDGDY 4179
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L D+ +V + S AL+ G +YTWG+G
Sbjct: 4180 GKLG--RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDG--EVLMLGGSHHGMLSDPERVSST 320
SD + + G H + T DG EV G + G L D +
Sbjct: 4238 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
RP VA L G K+ ++A G+ H+
Sbjct: 4298 RPRLVAA-----LQGKKINRVACGSAHT 4320
Score = 286 (105.7 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 87/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL++ G+VFSWG G G+LGHG+ V PK ++ G + + HI+
Sbjct: 505 GHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIAC 559
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V ++CG + L
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D++IV + S AL+ +
Sbjct: 620 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +YTWG+G N T + V + G H L LT D EV G
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D R+ T+P AL LD ++ IA G S
Sbjct: 737 NDQCQHFDTLRI--TKPEPAALP---GLDTKHIVGIACGPAQS 774
Score = 273 (101.2 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 98/383 (25%), Positives = 160/383 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKV 93
KV+ WG QLG G + GG+ L A+T + GKV
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----VEGKV 3017
Query: 94 FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++ G ++G+LG G + P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 3018 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3077
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS---GELYTWGLGEYGR 3134
Query: 213 LGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGF 263
LG + + + +V +G H + V + ++ AL+ EG +++WG RG
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 264 NSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ ++ G L LT G V G + L V +P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3252
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3253 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q + T+ V CGS + A
Sbjct: 3309 -GLEGQ-KITR--VACGSSHSVA 3327
Score = 257 (95.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 63/230 (27%), Positives = 112/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P VT G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTEE--HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 233 (87.1 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 83/305 (27%), Positives = 129/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V I+A G SA ++A G L+TWG+G
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 264 ---NSTSDVN---CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S + G L LT D V G +G L
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L + V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4189 GCKVPM-----KIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243
Query: 378 HPKVV 382
P+ V
Sbjct: 4244 RPRQV 4248
Score = 218 (81.8 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 102/391 (26%), Positives = 159/391 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3959 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 4012
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V IA G HS + ++ +G G+ G+LG
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA---AGDLFTWGKGRYGRLG 4129
Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S+D+++ P++ L ++ I+ +GD ++ L+ + +++WG RG
Sbjct: 4130 HGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4186 GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4243
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA--IMTWGWGEHGQLGLGNTCDQI 377
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T
Sbjct: 4244 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V Q + V CGS T A S
Sbjct: 4298 RPRLVAA---LQGKKIN-RVACGSAHTLAWS 4324
Score = 212 (79.7 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 83/312 (26%), Positives = 133/312 (42%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDS 144
++ I KVF WG QLG G + K +F + + ++ G V+
Sbjct: 2958 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGN 200
G ++ CG+ T G+LG G S + P+ ++++ N V ++A G RH++ L D
Sbjct: 3015 GKVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD---G 3070
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+++ +G G G+LG R+ + P++ L I I+ SAA+++ G LYTWG
Sbjct: 3071 KIFSWGEGDDGKLG-HFSRM-NCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 261 --------RGFNSTSDVNCXXXXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGM 310
G N+T G L LT +G V G G
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3188
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L P + + L+G V QI GA+ S +T++ + TWG G++ +LG
Sbjct: 3189 LGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Query: 371 GNTCDQIHPKVV 382
G P+VV
Sbjct: 3244 GTDVHVRKPQVV 3255
Score = 193 (73.0 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 68/250 (27%), Positives = 114/250 (45%)
Query: 136 NHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRH 189
+H +S +G +F+ CGDG G+LGHGD P +S+ K+V IACG +
Sbjct: 506 HHYLALSANGEVFSWGCGDG--GRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RS 247
S + + ++Y +G G G+LG +++ P + GL ++++ +S +GD ++
Sbjct: 564 SAAITAE---GELYTWGRGNYGRLGHGSSEDQTI--PMLVTGLKGLKVIDVSCGSGDAQT 618
Query: 248 AALSAEGHLYTWGRGF-----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDG 298
A++ G +++WG G SD C + G + LT DG
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGRGGSD-GCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAI 357
+V G D +R+ V K+ L G KVI +AAG+ H +TE+ +
Sbjct: 678 QVYTWGKG------DNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Query: 358 MTWGWGEHGQ 367
+WG + Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 186 (70.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 70/271 (25%), Positives = 120/271 (44%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + S P++ N V QIAC + L+L ++ +VY
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRN---GRVY--------TQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRGFNST---SD- 268
+ D + PQ+ L IV I+A+ D ALSA G +++WG G D
Sbjct: 478 YNSDTLG----PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDT 533
Query: 269 --------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L T
Sbjct: 534 VPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ V + L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 594 IPMLV-----TGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 649 PKLI---EKLQDLDI-VKVRCGSQFSIALTK 675
Score = 180 (68.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 69/280 (24%), Positives = 118/280 (42%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 4012
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 4013 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4070
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH 4130
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI IA G+ + +T++ + +WG G++G+LG G
Sbjct: 4131 GDSEDQLKP-----KLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 372 NT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ C ++ K+ +L D ++V CGS F+ A+++
Sbjct: 4186 GSDGC-KVPMKIDSLTDL-----GVVKVECGSQFSVALTK 4219
Score = 165 (63.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 64/238 (26%), Positives = 106/238 (44%)
Query: 163 YRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLG----V 215
Y S + P V S ++N+ +IA H L L + +V+ +G G G+LG V
Sbjct: 478 YNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSAN---GEVFSWGCGDGGRLGHGDTV 534
Query: 216 SKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSD 268
+ + +S L G H +V I+ SAA++AEG LYTWGRG S+ D
Sbjct: 535 PLEEPKLISALSGKQAGKH---VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSED 591
Query: 269 VNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ G L +T +G+V G +G L P
Sbjct: 592 QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ EK+ +LD ++++ G++ S +T++ + TWG G++ +LG G +PK++
Sbjct: 652 I--EKLQDLD---IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLL 704
Score = 54 (24.1 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3281 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 46 (21.3 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
G V + AAG E +A + + WG + QLG
Sbjct: 2945 GSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLG 2977
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 305 (112.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 93/329 (28%), Positives = 142/329 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H +ALT + G
Sbjct: 3016 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VDG 3070
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K+FSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTWG 3128
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3187
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G +
Sbjct: 3188 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPT 3305
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3306 LV-----QGLEGQKITRVACGSSHSVAWT 3329
Score = 292 (107.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 96/328 (29%), Positives = 137/328 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4010 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4064
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + I+AG HS ++ +G LFT G
Sbjct: 4065 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAGGAHSACITAAGDLFTWGK 4122
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGHGD P V + V IACG + L CL + V+ +G G
Sbjct: 4123 GRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTL---CLTDDDTVWSWGDGDY 4179
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L D+ +V + S AL+ G +YTWG+G
Sbjct: 4180 GKLG--RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDG--EVLMLGGSHHGMLSDPERVSST 320
SD + + G H + T DG EV G + G L D +
Sbjct: 4238 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
RP VA L G K+ ++A G+ H+
Sbjct: 4298 RPRLVAA-----LQGKKINRVACGSAHT 4320
Score = 286 (105.7 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 87/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL++ G+VFSWG G G+LGHG+ V PK ++ G + + HI+
Sbjct: 505 GHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIAC 559
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V ++CG + L
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D++IV + S AL+ +
Sbjct: 620 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +YTWG+G N T + V + G H L LT D EV G
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D R+ T+P AL LD ++ IA G S
Sbjct: 737 NDQCQHFDTLRI--TKPEPAALP---GLDTKHIVGIACGPAQS 774
Score = 273 (101.2 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 98/383 (25%), Positives = 160/383 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKV 93
KV+ WG QLG G + GG+ L A+T + GKV
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----VEGKV 3017
Query: 94 FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++ G ++G+LG G + P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 3018 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3077
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS---GELYTWGLGEYGR 3134
Query: 213 LGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGF 263
LG + + + +V +G H + V + ++ AL+ EG +++WG RG
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 264 NSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ ++ G L LT G V G + L V +P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3252
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3253 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q + T+ V CGS + A
Sbjct: 3309 -GLEGQ-KITR--VACGSSHSVA 3327
Score = 257 (95.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 63/230 (27%), Positives = 112/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P VT G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTEE--HVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 233 (87.1 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 83/305 (27%), Positives = 129/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4014
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V I+A G SA ++A G L+TWG+G
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 264 ---NSTSDVN---CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S + G L LT D V G +G L
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L + V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4189 GCKVPM-----KIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243
Query: 378 HPKVV 382
P+ V
Sbjct: 4244 RPRQV 4248
Score = 218 (81.8 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 102/391 (26%), Positives = 159/391 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3959 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD-----GKLY 4012
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V IA G HS + ++ +G G+ G+LG
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA---AGDLFTWGKGRYGRLG 4129
Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S+D+++ P++ L ++ I+ +GD ++ L+ + +++WG RG
Sbjct: 4130 HGDSEDQLK----PKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4186 GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4243
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA--IMTWGWGEHGQLGLGNTCDQI 377
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T
Sbjct: 4244 -RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V Q + V CGS T A S
Sbjct: 4298 RPRLVAA---LQGKKIN-RVACGSAHTLAWS 4324
Score = 212 (79.7 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 83/312 (26%), Positives = 133/312 (42%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDS 144
++ I KVF WG QLG G + K +F + + ++ G V+
Sbjct: 2958 AATIRTKVFVWGLNDKDQLG-GLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGN 200
G ++ CG+ T G+LG G S + P+ ++++ N V ++A G RH++ L D
Sbjct: 3015 GKVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVD---G 3070
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+++ +G G G+LG R+ + P++ L I I+ SAA+++ G LYTWG
Sbjct: 3071 KIFSWGEGDDGKLG-HFSRM-NCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 261 --------RGFNSTSDVNCXXXXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGM 310
G N+T G L LT +G V G G
Sbjct: 3129 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3188
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L P + + L+G V QI GA+ S +T++ + TWG G++ +LG
Sbjct: 3189 LGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243
Query: 371 GNTCDQIHPKVV 382
G P+VV
Sbjct: 3244 GTDVHVRKPQVV 3255
Score = 193 (73.0 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 68/250 (27%), Positives = 114/250 (45%)
Query: 136 NHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRH 189
+H +S +G +F+ CGDG G+LGHGD P +S+ K+V IACG +
Sbjct: 506 HHYLALSANGEVFSWGCGDG--GRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RS 247
S + + ++Y +G G G+LG +++ P + GL ++++ +S +GD ++
Sbjct: 564 SAAITAE---GELYTWGRGNYGRLGHGSSEDQTI--PMLVTGLKGLKVIDVSCGSGDAQT 618
Query: 248 AALSAEGHLYTWGRGF-----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDG 298
A++ G +++WG G SD C + G + LT DG
Sbjct: 619 LAVTENGQVWSWGDGDYGKLGRGGSD-GCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAI 357
+V G D +R+ V K+ L G KVI +AAG+ H +TE+ +
Sbjct: 678 QVYTWGKG------DNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEV 731
Query: 358 MTWGWGEHGQ 367
+WG + Q
Sbjct: 732 HSWGSNDQCQ 741
Score = 186 (70.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 70/271 (25%), Positives = 120/271 (44%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + S P++ N V QIAC + L+L ++ +VY
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRN---GRVY--------TQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRGFNST---SD- 268
+ D + PQ+ L IV I+A+ D ALSA G +++WG G D
Sbjct: 478 YNSDTLG----PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDT 533
Query: 269 --------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L T
Sbjct: 534 VPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQT 593
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ V + L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 594 IPMLV-----TGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 649 PKLI---EKLQDLDI-VKVRCGSQFSIALTK 675
Score = 180 (68.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 69/280 (24%), Positives = 118/280 (42%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD---GKLY 4012
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 4013 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4070
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4071 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGH 4130
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI IA G+ + +T++ + +WG G++G+LG G
Sbjct: 4131 GDSEDQLKP-----KLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 372 NT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ C ++ K+ +L D ++V CGS F+ A+++
Sbjct: 4186 GSDGC-KVPMKIDSLTDL-----GVVKVECGSQFSVALTK 4219
Score = 165 (63.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 64/238 (26%), Positives = 106/238 (44%)
Query: 163 YRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLG----V 215
Y S + P V S ++N+ +IA H L L + +V+ +G G G+LG V
Sbjct: 478 YNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSAN---GEVFSWGCGDGGRLGHGDTV 534
Query: 216 SKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSD 268
+ + +S L G H +V I+ SAA++AEG LYTWGRG S+ D
Sbjct: 535 PLEEPKLISALSGKQAGKH---VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSED 591
Query: 269 VNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ G L +T +G+V G +G L P
Sbjct: 592 QTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ EK+ +LD ++++ G++ S +T++ + TWG G++ +LG G +PK++
Sbjct: 652 I--EKLQDLD---IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLL 704
Score = 54 (24.1 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3281 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 46 (21.3 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
G V + AAG E +A + + WG + QLG
Sbjct: 2945 GSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLG 2977
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 297 (109.6 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 106/362 (29%), Positives = 152/362 (41%)
Query: 39 WGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD-----GTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 269 -VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V G+
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GN 344
Query: 387 EF 388
F
Sbjct: 345 WF 346
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 58/181 (32%), Positives = 80/181 (44%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 203 (76.5 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 68/233 (29%), Positives = 104/233 (44%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG +DGQLG G ACG H LAL+ S +V
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----EV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG+ GQLG G + P+ + G + ++AG HS ++ SG +F G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFM--QVAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S + + I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + I+ ++A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/138 (33%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 297 (109.6 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 86/298 (28%), Positives = 135/298 (45%)
Query: 96 WGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TCG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH +S P +V + +N+ +ACG H+L L D QVY +G GQL
Sbjct: 62 DLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLAL-ND--KGQVYAWGLDSDGQL 116
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS-DVNC 271
G+ + +P+ L DI+IV ++ S ALS ++ WG+ + ++C
Sbjct: 117 GLQGSE-ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 272 XXXXXXXXXXXXXXL-------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ G H VLT G + G + G L + P
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP-- 233
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P+ V
Sbjct: 234 ---NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288
Score = 239 (89.2 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 71/207 (34%), Positives = 104/207 (50%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHI 131
ACG AH LAL G+V++WG S GQLG G P+ + + I +
Sbjct: 90 ACGEAHTLALNDK-----GQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQ--IVQV 142
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G+ HS +S + +F G +GQLG G D + +SP + S + Q+A G HS
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
VL L ++G+G K GQLG++ + R V P + L +IV I D +AAL
Sbjct: 203 FVLT---LSGAIFGWGRNKFGQLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAAL 257
Query: 251 SAEGHLYTWGRG------FNSTS-DVN 270
+ EG ++T+G G NSTS ++N
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Score = 228 (85.3 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 57/181 (31%), Positives = 80/181 (44%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V Q+ACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 203 (76.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 67/233 (28%), Positives = 105/233 (45%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG +DGQLG G ACG H LAL+ S +V
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----EV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG+ GQLG G + P+ + G + ++AG HS ++ SG +F G
Sbjct: 159 FCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFM--QVAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S ++ + I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + ++ ++A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 45/138 (32%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 297 (109.6 bits), Expect = 4.9e-25, P = 4.9e-25
Identities = 106/362 (29%), Positives = 152/362 (41%)
Query: 39 WGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD-----GTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 269 -VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V G+
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GN 344
Query: 387 EF 388
F
Sbjct: 345 WF 346
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 58/181 (32%), Positives = 80/181 (44%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 203 (76.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 68/233 (29%), Positives = 104/233 (44%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG +DGQLG G ACG H LAL+ S +V
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----EV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG+ GQLG G + P+ + G + ++AG HS ++ SG +F G
Sbjct: 159 FCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFM--QVAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S + + I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + I+ ++A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/138 (33%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 304 (112.1 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 95/329 (28%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H ALT + G
Sbjct: 2933 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 2987
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 2988 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 3045
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3046 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3104
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 3105 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3162
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3163 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT 3222
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3223 LV-----QGLEGQKITRVACGSSHSVAWT 3246
Score = 288 (106.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 107/412 (25%), Positives = 171/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE EKG S +LI + + KV+ WG QLG G +
Sbjct: 2854 EEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 2910
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV++ G ++G+LG G + P+ +T
Sbjct: 2911 SALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSS 2965
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 2966 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3025
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 3026 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 3081
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3082 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3141
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT+
Sbjct: 3142 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDA 3196
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3197 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3244
Score = 286 (105.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 87/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL + G+V+SWG G G+LGHG+ V PK ++ F G + + HI+
Sbjct: 415 GHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 469
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V +ACG + L
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D+++V + S AL+ +
Sbjct: 530 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 586
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +Y+WG+G N T + V + G H L LT D EV G
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 646
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D RV T+P AL LD ++ IA G S
Sbjct: 647 NDQCQHFDTLRV--TKPEPSALP---GLDTKHIVGIACGPAQS 684
Score = 285 (105.4 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 92/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 3928 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 3982
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 3983 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAGGAHSACVTAAGDLYTWGK 4040
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V +ACG + L CL + V+ +G G
Sbjct: 4041 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL---CLTDDDTVWSWGDGDY 4097
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4098 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4155
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + + DGEV G + G L D + RP
Sbjct: 4156 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4215
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 4216 RLVAA-----LQGKKVNRVACGSAHT 4236
Score = 255 (94.8 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 426 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 480
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 481 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 540
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 541 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 597
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 598 QRLGHGTEE--HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 645
Score = 241 (89.9 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 84/305 (27%), Positives = 130/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3875 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 3932
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3989
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L E+V ++A G SA ++A G LYTWG+G
Sbjct: 3990 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4046
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 4047 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4106
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4107 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4161
Query: 378 HPKVV 382
P+ V
Sbjct: 4162 RPRQV 4166
Score = 228 (85.3 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 101/389 (25%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3877 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD-----GKLY 3930
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 3931 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3990
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 3991 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 4047
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L +V ++ +GD ++ L+ + +++WG RG
Sbjct: 4048 HSDSEDQLK----PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4103
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4104 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4161
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H +E+ + TWG + GQLG G T P
Sbjct: 4162 -RP-----RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4215
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 4216 RLVAA---LQGKKVN-RVACGSAHTLAWS 4240
Score = 191 (72.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CGDG G+LGHGD P +S+F K+V IACG +S + + ++Y +
Sbjct: 432 CGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE---GELYTW 486
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRGF 263
G G G+LG ++ P + GL ++++ ++ +GD ++ A++ G +++WG G
Sbjct: 487 GRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 544
Query: 264 -----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
SD C + G + LT DG+V G D
Sbjct: 545 YGKLGRGGSD-GCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG------DN 597
Query: 315 ERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+R+ V K+ L G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 598 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 651
Score = 191 (72.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 70/271 (25%), Positives = 118/271 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ +VY
Sbjct: 339 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVY--------TQA 387
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRG---------- 262
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 388 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 443
Query: 263 --FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L
Sbjct: 444 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 503
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 504 IPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 558
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 559 PKLI---EKLQDLDV-VKVRCGSQFSVALTK 585
Score = 171 (65.3 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 68/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3874 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD---GKLY 3930
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LGV SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 3931 ATGYGAGGRLGVGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 3988
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 3989 AEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4048
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +V+ +A G+ + +T++ + +WG G++G+LG G
Sbjct: 4049 SDSEDQLKP-----KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4103
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4104 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4137
Score = 160 (61.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 67/263 (25%), Positives = 115/263 (43%)
Query: 163 YRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
Y S + +P V ++N+ +IA H L L +VY +G G G+LG D
Sbjct: 388 YNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLGHG-DT 443
Query: 220 IRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD- 268
+ + P+V + +V I+ SAA++AEG LYTWGRG S+ D
Sbjct: 444 V-PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 502
Query: 269 -VNCXXXXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ G L +T +G+V G +G L P +
Sbjct: 503 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 562
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
EK+ +LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 563 --EKLQDLD---VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL--- 614
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
+ Q + ++V GS A++
Sbjct: 615 EGLQGKKV-IDVAAGSTHCLALT 636
Score = 54 (24.1 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3198 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3247
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 304 (112.1 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 95/329 (28%), Positives = 141/329 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H ALT + G
Sbjct: 3023 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VDG 3077
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T G
Sbjct: 3078 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTWG 3135
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3136 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFG 3194
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G S
Sbjct: 3195 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3252
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3253 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT 3312
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3313 LV-----QGLEGQKITRVACGSSHSVAWT 3336
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 107/412 (25%), Positives = 171/412 (41%)
Query: 7 EETEKGKS-ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE EKG S +LI + + KV+ WG QLG G +
Sbjct: 2944 EEDEKGNSGSLIRKKAAGLESAATIR--TKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 3000
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T + GKV++ G ++G+LG G + P+ +T
Sbjct: 3001 SALNVVQVAGGSKSLFAVT-----VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSS 3055
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 3056 YVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3115
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS L ++Y +G G+ G+LG + + + +V +G H + V +
Sbjct: 3116 ACGSSHSAALTSS---GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG-HRVIQVACGS 3171
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3172 RDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3231
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VT+
Sbjct: 3232 TKSGVVWTWGKGDYFRLGHGSDVHVRKP-----QVVEGLRGKKIVHVAVGALHCLAVTDA 3286
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3287 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3334
Score = 286 (105.7 bits), Expect = 4.9e-23, P = 4.9e-23
Identities = 87/283 (30%), Positives = 129/283 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISA 133
G H LAL + G+V+SWG G G+LGHG+ V PK ++ F G + + HI+
Sbjct: 505 GHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L+T G G +G+LGHG + P+ V+ V +ACG + L
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D+++V + S AL+ +
Sbjct: 620 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 676
Query: 254 GHLYTWGRGFNS-----TSD-VNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
G +Y+WG+G N T + V + G H L LT D EV G
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ D RV T+P AL LD ++ IA G S
Sbjct: 737 NDQCQHFDTLRV--TKPEPSALP---GLDTKHIVGIACGPAQS 774
Score = 285 (105.4 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 92/326 (28%), Positives = 135/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4018 KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GE 4072
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G+LGHG P+ + G + ++AG HS V+ +G L+T G
Sbjct: 4073 VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAGGAHSACVTAAGDLYTWGK 4130
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGH D P V + V +ACG + L CL + V+ +G G
Sbjct: 4131 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTL---CLTDDDTVWSWGDGDY 4187
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4188 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4245
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + + DGEV G + G L D + RP
Sbjct: 4246 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4305
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G KV ++A G+ H+
Sbjct: 4306 RLVAA-----LQGKKVNRVACGSAHT 4326
Score = 255 (94.8 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 63/230 (27%), Positives = 111/230 (48%)
Query: 35 KVWSWGAGTDGQLGTGR---LHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + + ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTEE--HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 241 (89.9 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 84/305 (27%), Positives = 130/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 4022
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4079
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L E+V ++A G SA ++A G LYTWG+G
Sbjct: 4080 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4136
Query: 264 -NSTSDVNCX-----XXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ G L LT D V G +G L
Sbjct: 4137 GHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4196
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4197 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4251
Query: 378 HPKVV 382
P+ V
Sbjct: 4252 RPRQV 4256
Score = 228 (85.3 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 101/389 (25%), Positives = 159/389 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3967 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD-----GKLY 4020
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G P + +++G H +S G +++ G+
Sbjct: 4021 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S V +A G HS + +Y +G G+ G+LG
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA---AGDLYTWGKGRYGRLG 4137
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S +D+++ P++ L +V ++ +GD ++ L+ + +++WG RG
Sbjct: 4138 HSDSEDQLK----PKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4193
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSS 319
+ V G + LT G V G G +H G SD + V
Sbjct: 4194 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVR- 4251
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP +V L G KVI IA G+ H +E+ + TWG + GQLG G T P
Sbjct: 4252 -RP-----RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP 4305
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++V Q + V CGS T A S
Sbjct: 4306 RLVAA---LQGKKVN-RVACGSAHTLAWS 4330
Score = 191 (72.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 64/234 (27%), Positives = 105/234 (44%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CGDG G+LGHGD P +S+F K+V IACG +S + + ++Y +
Sbjct: 522 CGDG--GRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE---GELYTW 576
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRGF 263
G G G+LG ++ P + GL ++++ ++ +GD ++ A++ G +++WG G
Sbjct: 577 GRGNYGRLGHGSSEDEAI--PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 264 -----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
SD C + G + LT DG+V G D
Sbjct: 635 YGKLGRGGSD-GCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG------DN 687
Query: 315 ERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+R+ V K+ L G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 191 (72.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 70/271 (25%), Positives = 118/271 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ +VY
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVY--------TQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWGRG---------- 262
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 478 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 263 --FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEA 593
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 594 IPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 649 PKLI---EKLQDLDV-VKVRCGSQFSVALTK 675
Score = 171 (65.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 68/278 (24%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD---GKLY 4020
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LGV SVS P + + + I V +++ G ALS+EG +Y+WG
Sbjct: 4021 ATGYGAGGRLGVGGTE--SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 4078
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T G++ G +G L
Sbjct: 4079 AEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGH 4138
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +V+ +A G+ + +T++ + +WG G++G+LG G
Sbjct: 4139 SDSEDQLKP-----KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4193
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4194 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4227
Score = 160 (61.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 67/263 (25%), Positives = 115/263 (43%)
Query: 163 YRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
Y S + +P V ++N+ +IA H L L +VY +G G G+LG D
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLGHG-DT 533
Query: 220 IRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD- 268
+ + P+V + +V I+ SAA++AEG LYTWGRG S+ D
Sbjct: 534 V-PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 269 -VNCXXXXXXXXXXXXXXLGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ G L +T +G+V G +G L P +
Sbjct: 593 AIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
EK+ +LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 653 --EKLQDLD---VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLL--- 704
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
+ Q + ++V GS A++
Sbjct: 705 EGLQGKKV-IDVAAGSTHCLALT 726
Score = 54 (24.1 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTS 84
+V++WG GQ G G ACG +H +A T+
Sbjct: 3288 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3337
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 296 (109.3 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 105/362 (29%), Positives = 152/362 (41%)
Query: 39 WGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD-----GTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 269 -VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V G+
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GN 344
Query: 387 EF 388
F
Sbjct: 345 WF 346
Score = 231 (86.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 58/181 (32%), Positives = 80/181 (44%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 207 (77.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 69/233 (29%), Positives = 105/233 (45%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG +DGQLG G ACG H LAL+ S +V
Sbjct: 104 QVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----EV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG+ GQLG G E P+ + G + ++AG HS ++ SG +F G
Sbjct: 159 FCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFM--QVAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S ++ + I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + I+ ++A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/138 (33%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 303 (111.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 93/329 (28%), Positives = 142/329 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC---GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G GG H +ALT + G
Sbjct: 3008 KVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALT-----VDG 3062
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++ G
Sbjct: 3063 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSWG 3120
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + V Q+ACG R + L G V+ +G G G
Sbjct: 3121 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEG-MVFSWGDGDFG 3179
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
+LG + ++PQ L+ + I S AL+ G ++TWG+G +
Sbjct: 3180 KLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3237
Query: 268 DVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
DV+ +G H L +T G+V G + HG + + +P
Sbjct: 3238 DVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPT 3297
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V L+G K+ ++A G+ HS T
Sbjct: 3298 LV-----QGLEGQKITRVACGSSHSVAWT 3321
Score = 293 (108.2 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 93/326 (28%), Positives = 136/326 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G A GG H LAL+S G+
Sbjct: 4003 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE-----GE 4057
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++SWG G+LGHG P+ + G + I+AG HS ++ SG L+T G
Sbjct: 4058 LYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAGGAHSACITASGELYTWGK 4115
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--GNQVYGFGSGKR 210
G +G+LGHGD P V + V +ACG + L CL + V+ +G G
Sbjct: 4116 GRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTL---CLTDDDMVWSWGDGDY 4172
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNST 266
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4173 GKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4230
Query: 267 SDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD + + G H + T DGEV G + G L D + RP
Sbjct: 4231 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4290
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
VA L G K+ ++A G+ H+
Sbjct: 4291 RLVAA-----LQGKKINRVACGSAHT 4311
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 104/412 (25%), Positives = 172/412 (41%)
Query: 7 EETEKGKSALINNAKPKIXXXXXXQQV-VKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX 65
EE E K+A + ++ ++ + KV+ WG QLG G +
Sbjct: 2927 EEEEDEKTATGSMSRKRLSGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETL 2985
Query: 66 XXXXXXXACGGAHVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDG 123
GG+ L A+T+ GKV++ G ++G+LG G + P+ ++
Sbjct: 2986 SALNVVQVAGGSKSLFAVTAE-----GKVYACGEATNGRLGLGLSSGTIPIPRQISALSN 3040
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + +G H+ ++ G +F+ G+G G+LGH + P + + K + I
Sbjct: 3041 YVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDI 3100
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISA 242
ACG HS + ++Y +G G+ G+LG + + L +V +G H + V +
Sbjct: 3101 ACGSSHSAAITSS---GELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLG-HRVVQVACGS 3156
Query: 243 NGDRSAALSAEGHLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ AL+ EG +++WG RG + ++ G L L
Sbjct: 3157 RDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3216
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G V G + L V +P + V L G K++ +A GA H VTE
Sbjct: 3217 TKSGVVWTWGKGDYFRLGHGTDVHVRKP-----QMVEGLRGKKIVHVAVGALHCLAVTET 3271
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q + T+ V CGS + A
Sbjct: 3272 GQVFAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ-KITR--VACGSSHSVA 3319
Score = 278 (102.9 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 74/241 (30%), Positives = 113/241 (46%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISA 133
G H LAL+ + G+VFSWG G G+LGHG+ P ++ F G + HI+
Sbjct: 494 GQHYLALS-----VNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIAC 548
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +S ++ G L T G G +G+LGHG ++P+ V++ V +ACG + L
Sbjct: 549 GSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTL 608
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G QV+ +G G G+LG + P++ L D++IV + S AL+ +
Sbjct: 609 AVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 665
Query: 254 GHLYTWGRGFNST----SDVNCXX----XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G +YTWG+G N +D + +G H L LT +GEV G
Sbjct: 666 GQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGS 725
Query: 306 S 306
+
Sbjct: 726 N 726
Score = 255 (94.8 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 67/230 (29%), Positives = 108/230 (46%)
Query: 35 KVWSWGAGTDGQLGTGR---LHDEXXXXXXXXX-XXXXXXXXACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G L + ACG + A+T+
Sbjct: 505 EVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITAD----- 559
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++ +WGRG+ G+LGHG D P VT G + +G + V+++G +++
Sbjct: 560 GELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSW 619
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P V + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 620 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 676
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG D V P++ L +V I+ AL+ EG +++WG
Sbjct: 677 QRLGHGTDE--HVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Score = 243 (90.6 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 83/305 (27%), Positives = 130/305 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3950 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV--QLIGGEQTLFAVTADGKLYAT 4007
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + ++Y +G
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GELYSWGEA 4064
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L +E+V I+A G SA ++A G LYTWG+G
Sbjct: 4065 EDGKLGHGN---RSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRL 4121
Query: 264 ---NSTSDVN---CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S + G L LT D V G +G L
Sbjct: 4122 GHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD 4181
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4182 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4236
Query: 378 HPKVV 382
P+ V
Sbjct: 4237 RPRQV 4241
Score = 239 (89.2 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 104/392 (26%), Positives = 163/392 (41%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL-ALTSPSSVIGGKVF 94
++ WG GQLG G + GG L A+T+ GK++
Sbjct: 3952 IYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTAD-----GKLY 4005
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH---ISAGWNHSGFVSDSGCLFTCG 151
+ G G+ G+LG G P T + ++ +++G H +S G L++ G
Sbjct: 4006 ATGYGAGGRLGIGGTESVSTP---TLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG 4062
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ G+LGHG+ P + S V IA G HS + ++Y +G G+ G
Sbjct: 4063 EAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITAS---GELYTWGKGRYG 4119
Query: 212 QLGV--SKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG------- 260
+LG S+D+++ P++ L ++ ++ +GD ++ L+ + +++WG
Sbjct: 4120 RLGHGDSEDQLK----PKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKL 4175
Query: 261 -RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPER 316
RG + V G + LT G V G G +H G SD +
Sbjct: 4176 GRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD-DH 4234
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
V RP +V L G KVI IA G+ H TE+ + TWG + GQLG G T
Sbjct: 4235 VR--RP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI 4287
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V Q + V CGS T A S
Sbjct: 4288 QRPRLVAA---LQGKKIN-RVACGSAHTLAWS 4315
Score = 183 (69.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 65/218 (29%), Positives = 91/218 (41%)
Query: 38 SWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGG--AHVLALTSPSSVIGGKVFS 95
+WG G G+LG G D+ ACG A LA+T G+V+S
Sbjct: 564 TWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTE-----NGQVWS 618
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LG G PK V I + G S ++ G ++T G G
Sbjct: 619 WGDGDYGKLGRGGSDGCKTPKLVEKLQD--LDIVKVCCGSQFSVALTKDGQVYTWGKGDN 676
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
+LGHG P + S K V IA G H L L ++ +V+ +GS + Q
Sbjct: 677 QRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEE---GEVHSWGSNDKLQ--- 730
Query: 216 SKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSA 252
D + S P+ GL+ IVGIS +S + S+
Sbjct: 731 HFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFSWSS 768
Score = 180 (68.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 70/278 (25%), Positives = 114/278 (41%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG ++ G GQLG + P + Q+ G + + D ++Y
Sbjct: 3949 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTAD---GKLY 4005
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR 261
G G G+LG+ SVS P + + + I V +++ G ALS+EG LY+WG
Sbjct: 4006 ATGYGAGGRLGIGGTE--SVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGE 4063
Query: 262 --------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G S D G H +T GE+ G +G L
Sbjct: 4064 AEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGH 4123
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P + V L G +VI +A G+ + +T++ + +WG G++G+LG G
Sbjct: 4124 GDSEDQLKP-----KLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 4178
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D KV D ++V CGS F+ A+++
Sbjct: 4179 GS-DGC--KVPMKIDSLTGLGV-VKVECGSQFSVALTK 4212
Score = 179 (68.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 64/239 (26%), Positives = 107/239 (44%)
Query: 141 VSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLL 194
+S +G +F+ CGDG G+LGHGD P +S F V K V IACG +S +
Sbjct: 500 LSVNGEVFSWGCGDG--GRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAIT 557
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSA 252
D +++ +G G G+LG ++ P + L ++++ ++ +GD ++ A++
Sbjct: 558 AD---GELHTWGRGNYGRLGHGSSEDQTT--PMLVTALKGLKVIDVACGSGDAQTLAVTE 612
Query: 253 EGHLYTWGRGF-----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLML 303
G +++WG G SD C + G + LT DG+V
Sbjct: 613 NGQVWSWGDGDYGKLGRGGSD-GCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTW 671
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G D +R+ V K+ +L G +V+ IA G+ H +TE + +WG
Sbjct: 672 GKG------DNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Score = 173 (66.0 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 68/272 (25%), Positives = 117/272 (43%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G LG Y + + P++ + N V QI C + L+L + VY
Sbjct: 418 WGLLGWKPYANVNGPIQCKALSNLGVTQIVCSEKGFLILT---ITGAVY----------- 463
Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRG--------- 262
+S +L P + L +I+ ++A+ G ALS G +++WG G
Sbjct: 464 --TQNYKSTTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGD 521
Query: 263 ---FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ ++ G + +T DGE+ G ++G L
Sbjct: 522 TTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQ 581
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T P+ V L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 582 TTPMLVTA-----LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 636
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK+V ++ Q+ D ++V CGS F+ A+++
Sbjct: 637 TPKLV---EKLQDLDI-VKVCCGSQFSVALTK 664
Score = 160 (61.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 63/262 (24%), Positives = 119/262 (45%)
Query: 162 DYRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
+Y+S + +P+ V + ++ + ++A +H L L + +V+ +G G G+LG
Sbjct: 466 NYKSTTLAPMLVHALTSRKIMKLAAHPDGQHYLAL---SVNGEVFSWGCGDGGRLGHGDT 522
Query: 219 R-IRSVSLPQVTIGLH-DIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVN 270
+ ++ V G ++V I+ SAA++A+G L+TWGRG S+ D
Sbjct: 523 TYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQT 582
Query: 271 CXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ G L +T +G+V G +G L P V
Sbjct: 583 TPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV- 641
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
EK+ +LD ++++ G++ S +T++ + TWG G++ +LG G D+ H + L D
Sbjct: 642 -EKLQDLD---IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT--DE-HVRYPKLLD 694
Query: 387 EFQNRDTQLEVFCGSGFTYAIS 408
Q + +++ GS A++
Sbjct: 695 SLQGKRV-VDIAVGSTHCLALT 715
Score = 54 (24.1 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 19/81 (23%), Positives = 31/81 (38%)
Query: 4 PLMEETEKGKSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXX 63
P M E +GK +++ A + + +V++WG GQ G G
Sbjct: 3244 PQMVEGLRGKK-IVHVAVGALHCLAVTE-TGQVFAWGDNDHGQQGNGTTTVNRKPTLVQG 3301
Query: 64 XXXXXXXXXACGGAHVLALTS 84
ACG +H +A T+
Sbjct: 3302 LEGQKITRVACGSSHSVAWTT 3322
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 295 (108.9 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 103/356 (28%), Positives = 149/356 (41%)
Query: 39 WGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD-----GTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 269 -VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/181 (31%), Positives = 80/181 (44%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V +IACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 203 (76.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 68/233 (29%), Positives = 105/233 (45%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG +DGQLG G ACG H LAL+ S +V
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----EV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG+ GQLG G + P+ + G + ++AG HS ++ SG +F G
Sbjct: 159 FCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFM--QVAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S ++ + I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + I+ ++A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/138 (33%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 285 (105.4 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 94/304 (30%), Positives = 135/304 (44%)
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
S ++ +F+WG S GQLG G D L P+ + F R ++ I+ G HS V+D
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTD 66
Query: 144 SGCLFTCG---DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
G LF CG DG G LGH + + +P K S + Q+ACG +++L ++
Sbjct: 67 GGDLFVCGLNKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---G 120
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
QV GS GQLGV R V +PQ I LH ++V I+A + A +A G ++ WG
Sbjct: 121 QVLSCGSNSFGQLGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Query: 261 RGFNSTSDVNC---------------XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G S C G +H LT GEV + G
Sbjct: 179 TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ HG L++ ++ P+ +E KV I +G H TE + TWG ++
Sbjct: 239 NKHGQLANE---AAFLPVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 366 GQLG 369
GQLG
Sbjct: 295 GQLG 298
Score = 247 (92.0 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 101/405 (24%), Positives = 160/405 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGA-HVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G D Y P G I ++ GW+ + ++++G + +CG +
Sbjct: 72 VCGLNKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V IA G+RH++ + Q +G G G+
Sbjct: 130 FGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ-WGTGLASCGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
R G + + P GL + + + + A D SA+L+ G +Y WG N
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN 246
Query: 265 STSDV----NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP------ 314
+ + GW H++ T G++ G + +G L
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEG 306
Query: 315 ---ERVSSTRPLSVALEKVSNLDG--VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
E+ S P S + + +++ G+EH+ + +WGW EHG G
Sbjct: 307 WKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
G + PK V + + L V CG+G + A+ + LP+
Sbjct: 366 DGTEANVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ--LPA 404
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 293 (108.2 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 104/356 (29%), Positives = 145/356 (40%)
Query: 39 WGAGTDGQLGTGRLHDEXXXX--XXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDD-----GTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKARKR--PEHVGALDAQN--IVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD- 268
+ + S P V L I I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230
Query: 269 -VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V G +H LT +G V G +G L P
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV L G V QI G +H+ A V + I ++G G +GQLG G T ++ P V
Sbjct: 286 RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341
Score = 234 (87.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 60/182 (32%), Positives = 80/182 (43%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G + A GGAH LT + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGD 152
F WGR GQLG + D P T R + HI G +H+ ++ G +FT G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVP---TLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGA 268
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QI CG +H+ + ++Y FG G GQ
Sbjct: 269 GGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQ 326
Query: 213 LG 214
LG
Sbjct: 327 LG 328
Score = 221 (82.9 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 73/233 (31%), Positives = 103/233 (44%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG TDGQLG G ACG H LAL+ G +V
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK-----GSEV 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FSWG+ GQLG G E P + G + I+AG HS ++ SG +F G
Sbjct: 159 FSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFA--QIAAGGAHSFVLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG D P + S + V I CG H+ L K+ G V+ FG+G GQ
Sbjct: 217 NKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE--GG-VFTFGAGGYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG + ++ P+ L + I+ + A + + G +Y++G G N
Sbjct: 274 LGHNSTS-HEIN-PRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324
Score = 157 (60.3 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 45/138 (32%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D CG H ALT GG VF+
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE----GG-VFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H+ FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGTTSNRKSPFTV 341
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 289 (106.8 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 105/360 (29%), Positives = 166/360 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG H +T G++F+WG S G+LGHG D +P+ V ++ ++
Sbjct: 287 ACGVRHAAFVTRQ-----GEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATS-SVDFVA 340
Query: 133 AGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRH 189
G H+ V+ +G L+T GDGT G LGHG SH P +++ S +V ++CG H
Sbjct: 341 CGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWH 400
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRI---RSV-SLP-----QVTIGL-HDIEIV 238
+ ++ G +++ FG G G LG K+ + R V SL V+ G+ H +V
Sbjct: 401 TALITS--YG-RLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNST-----SDVNCXXXXX-XXXXXXXXXLGWNHVL 292
I S+++S+ G L+TWG G + D + H L
Sbjct: 458 EIIVTQSNSSSVSS-GKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSL 516
Query: 293 V--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
LT G+V +G + +G L + + P V + S V +I+ GA H A
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQ-TDGKLPCLVEDKLASEF----VEEISCGAYHVAA 571
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T + TWG G +G+LG G+ D+ P +V + ++R + + CGS +T AI H
Sbjct: 572 LTSRNEVYTWGKGANGRLGHGDLEDRKVPTIV---EALKDRHVKY-IACGSNYTAAICLH 627
Score = 225 (84.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 86/341 (25%), Positives = 145/341 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXX-XXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
++++WG + G+LG G D ACG H A+T + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355
Query: 94 FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAG-WNHSGFVSDSGCLFT 149
++WG G+ G LGHG + PK + +G + +S G W H+ ++ G LFT
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLH--VASVSCGPW-HTALITSYGRLFT 412
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL---------GN 200
GDGTFG LGHGD + P +V S ++CG+ H+ +++ +
Sbjct: 413 FGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSG 472
Query: 201 QVYGFGSGKRGQLGVS-KD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
+++ +G G + +LG KD R++ +P L D I+ + L+ G ++T
Sbjct: 473 KLFTWGDGDKNRLGHGDKDPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGQVFT 528
Query: 259 -----WGRGFNSTSD--VNCXXXXXXXXXXXXX-XLGWNHVLVLTGDGEVLMLGGSHHGM 310
+G+ N +D + C G HV LT EV G +G
Sbjct: 529 MGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGR 588
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
L + R + +E + + VK I A G+ ++A +
Sbjct: 589 LGHGDL--EDRKVPTIVEALKDRH-VKYI--ACGSNYTAAI 624
Score = 148 (57.2 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 46/156 (29%), Positives = 74/156 (47%)
Query: 111 DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
D L PKP+ + I+ G H+ FV+ G +FT G+ + G+LGHG + P
Sbjct: 268 DVLVPKPLE--SNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPR 325
Query: 171 KVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVSLPQ 227
V S +V +ACG H+ + L ++Y +G G G LG D S +P+
Sbjct: 326 LVESLTATSSVDFVACGEFHTCAVT---LAGELYTWGDGTHNVGLLGHGSDI--SHWIPK 380
Query: 228 VTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G L + + +S +A +++ G L+T+G G
Sbjct: 381 RIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDG 416
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 279 (103.3 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 110/405 (27%), Positives = 163/405 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGA-HVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D GG H +T G +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDE-----GSLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + LY P G I ++ GW+ + ++++G + +CG +
Sbjct: 72 VCGLNKDGQLGLGHTEEVLYFTPCKSLLG--CAIQQVACGWDFTIILTENGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + + + V IA G+RH+L Q +G G SG+
Sbjct: 130 FGQLGVPHGPRRC-VIPQAIE-LLREKVVSIAAGLRHALAATASGTVFQ-WGTGLASSGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS--TS 267
R G + + P GL + + V + A D SA+L+ G LY WG + S
Sbjct: 187 RLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLAS 246
Query: 268 DV-------NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLS-------- 312
GW H++ T G+V G + +G L
Sbjct: 247 QAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREG 306
Query: 313 -DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ E+ + P S + S L + +I+ G+EH+ V +WGW EHG G
Sbjct: 307 WESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGG-VCHSWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
G D PK V G F L V CG+G + A+ + LP+
Sbjct: 366 DGTEADVWAPKPVP-GLRFF---LGLHVGCGAGHSLALCQ--LPA 404
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 67/250 (26%), Positives = 104/250 (41%)
Query: 137 HSG-FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLL 194
HS V + LF G ++GQLG G S ++S F + +I G HS V+
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVT 65
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDR-------IRSV---SLPQVTIGLHDIEIVGISANG 244
+ G+ ++ G K GQLG+ +S+ ++ QV G D I+ ++ NG
Sbjct: 66 DE--GS-LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW-DFTII-LTENG 120
Query: 245 D-RSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
S ++ G L G V G H L T G V
Sbjct: 121 QVLSCGSNSFGQL---GVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQW 177
Query: 304 GGSHHGMLSDPERV--SSTRPLSVALEKVSNLDGVKVIQ---IAAGAEHSAVVTENRAIM 358
G G+ S R+ T PL + ++ S + G++ Q + AG++HSA +T+ +
Sbjct: 178 GT---GLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELY 234
Query: 359 TWGWGEHGQL 368
WG +HGQL
Sbjct: 235 VWGSNKHGQL 244
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 286 (105.7 bits), Expect = 6.2e-24, P = 6.2e-24
Identities = 65/203 (32%), Positives = 100/203 (49%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
++++WG DGQLG GR+ + G AH +AL+ + G V
Sbjct: 168 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALS-----MSGNV 222
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G + P + D + + ++ G H+ ++ SG +FT GDG
Sbjct: 223 YSWGRNDCGQLGLGHTYNKESPSCIEALDDQK--VEFLACGGCHTALLTKSGLVFTFGDG 280
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH ++ P V+ V V QIACG +H+L + D +V+ FGSGK GQL
Sbjct: 281 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQL 338
Query: 214 GVSKDRIRSVSLPQVTIGLHDIE 236
G R + + P + +++
Sbjct: 339 GNGGTRNQLIPRPMKLLSSEELK 361
Score = 243 (90.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 71/216 (32%), Positives = 102/216 (47%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV + S S P++ L + +
Sbjct: 148 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 203
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXL--GWN 289
V ISA S ALS G++Y+WGR G T + L G
Sbjct: 204 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 263
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS- 348
H +LT G V G +G L + RP V+ L G +V QIA G +H+
Sbjct: 264 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHTL 318
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T +Q+ P+ + L
Sbjct: 319 AYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKL 354
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 62/191 (32%), Positives = 96/191 (50%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHIS 132
CG H LAL+ GG++F+WG+ GQLG G + P+ V G + IS
Sbjct: 155 CGDYHSLALSK-----GGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSG--VPLVQIS 207
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG HS +S SG +++ G GQLG G + SP + + ++ V +ACG H+ +
Sbjct: 208 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTAL 267
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LS 251
L K L V+ FG GK GQLG + ++ P++ GL + I+ + A +S
Sbjct: 268 LTKSGL---VFTFGDGKYGQLG--HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVS 322
Query: 252 AEGHLYTWGRG 262
G ++++G G
Sbjct: 323 DTGKVFSFGSG 333
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 64/239 (26%), Positives = 96/239 (40%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACG 186
I I+ G HS +S G LF G GQLG G + S S+P V + + QI+ G
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 209
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS+ L GN VY +G GQLG+ + P L D ++ ++ G
Sbjct: 210 EAHSMALSMS--GN-VYSWGRNDCGQLGLG--HTYNKESPSCIEALDDQKVEFLACGGCH 264
Query: 247 SAALSAEGHLYTWGRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGD- 297
+A L+ G ++T+G G NST + + G H L D
Sbjct: 265 TALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT 324
Query: 298 GEVLMLGGSHHGMLSDPERVSST--RPLSVALE---KVSNLDGVKVIQIAAGAEHSAVV 351
G+V G G L + + RP+ + K + VK + + AG S ++
Sbjct: 325 GKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKSESSTSVKELIMVAGGNQSILI 383
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L L+ GE+ G + G L +ST + V NL GV ++QI+AG HS
Sbjct: 159 HSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEI----VENLSGVPLVQISAGEAHSM 214
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF-CGSGFTYAIS 408
++ + + +WG + GQLGLG+T ++ P + D D ++E CG T ++
Sbjct: 215 ALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD-----DQKVEFLACGGCHTALLT 269
Query: 409 R 409
+
Sbjct: 270 K 270
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 52/185 (28%), Positives = 79/185 (42%)
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FNSTSDVNCXXXXXXXXXX 281
L + I+ I+ S ALS G L+ WG+ F STS
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 204
Query: 282 XXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
G H + L+ G V G + G L + P + LD KV +
Sbjct: 205 QISA-GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-----LDDQKVEFL 258
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
A G H+A++T++ + T+G G++GQLG +T +++ P++V G NR TQ+ CG
Sbjct: 259 ACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVT-G-LVGNRVTQIA--CGR 314
Query: 402 GFTYA 406
T A
Sbjct: 315 QHTLA 319
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 59/219 (26%), Positives = 96/219 (43%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQV-YGFG-SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+H + G H LVL D G Y + R Q + +++ ++ Q+T G D
Sbjct: 110 IHSMDQGEEHMLVLSSD--GKPFEYKYSIEHARFQC-ILQEK----NIIQITCG--DYHS 160
Query: 238 VGISANGDRSA-ALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTG 296
+ +S G+ A + +G L GR F STS G H + L+
Sbjct: 161 LALSKGGELFAWGQNLDGQLGV-GRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALSM 218
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G V G + G L + P + LD KV +A G H+A++T++
Sbjct: 219 SGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-----LDDQKVEFLACGGCHTALLTKSGL 273
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
+ T+G G++GQLG +T +++ P++V G NR TQ+
Sbjct: 274 VFTFGDGKYGQLGHNSTQNELRPRLVT-G-LVGNRVTQI 310
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 87/293 (29%), Positives = 124/293 (42%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG S GQLG G D L P+ ++ F + I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPG-CVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G S + + Q+ACG +++L K+ QV GS GQ
Sbjct: 76 NKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKN---GQVLSCGSNSFGQ 132
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC- 271
LGV R V +PQ I + ++V I+A + A +A G ++ WG G S+ C
Sbjct: 133 LGVPHGPRRCV-VPQA-IEVQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCP 190
Query: 272 ---------------XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G H LT GE+ + G + HG L+
Sbjct: 191 GQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQ-- 248
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ PL +E KV + +G H TE + TWG ++GQLG
Sbjct: 249 -AAFLPLPQKIE-AHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 210 (79.0 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 79/291 (27%), Positives = 117/291 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+++WGA + GQLG G D GG A+ + G +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQ----GSLFV 72
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GQLG G D LY G I ++ GW+ + ++ +G + +CG +F
Sbjct: 73 CGLNKDGQLGLGHTEDVLYFTLCKSLLG--CPIQQVACGWDFTIILTKNGQVLSCGSNSF 130
Query: 156 GQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKR 210
GQLG HG R P + + V IA G+RH+L L Q +G G SG+R
Sbjct: 131 GQLGVPHGPRRC-VVPQAIE-VQREKVVSIAAGLRHALAATASGLVFQ-WGTGLASSGRR 187
Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS--TS 267
G + + P +VT+GL + + V + A SA+L+ G LY WG + S
Sbjct: 188 LCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLAS 247
Query: 268 DV-------NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGML 311
GW H++ T G+V G + +G L
Sbjct: 248 QAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQL 298
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 269 (99.8 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 99/356 (27%), Positives = 152/356 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG + + +T G+++SWG S G+LGHG +PK + F+G T+
Sbjct: 305 SCGTNYAVLVTKQ-----GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGS--TVELAD 357
Query: 133 AGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRH 189
G H+ V+ SG L+ GDG G LG G SH PV++ V I+CG H
Sbjct: 358 CGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWH 417
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+ + + +++ FG G G LG DRI S ++P+ L+ + + SAA
Sbjct: 418 TAFVTSE---GKLFTFGDGTFGALGHG-DRI-STNIPREVEALNGCRTIKAACGVWHSAA 472
Query: 250 L-------SAEGHLYTWGRGFNST---SDVNCXX-----XXXXXXXXXXXXLGWNHVLVL 294
+ ++ G L+TWG G + D+ C G + + L
Sbjct: 473 VVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVAL 532
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ G+V +G +DP P + L V ++A G H AV+
Sbjct: 533 SMSGQVYAMG------TADPSHDIVRAPSCIE----GGLGKSFVQEVACGFHHIAVLNSK 582
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ TWG G +GQLG G+T + P +V Q R +V CGS +T I H
Sbjct: 583 AEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVR----KVVCGSNYTATICLH 634
Score = 252 (93.8 bits), Expect = 9.9e-19, P = 9.9e-19
Identities = 89/334 (26%), Positives = 138/334 (41%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G CG H A+T+ G ++
Sbjct: 319 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTA-----SGDLY 373
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAG-WNHSGFVSDSGCLFTC 150
+WG G ++G LG G A + KPV + IS G W H+ FV+ G LFT
Sbjct: 374 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGIYVKAISCGPW-HTAFVTSEGKLFTF 430
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFG 206
GDGTFG LGHGD S + P +V + + ACG+ HS ++ + +++ +G
Sbjct: 431 GDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWG 490
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
G G+LG R + P L ++ + ALS G +Y G S
Sbjct: 491 DGDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSH 548
Query: 267 SDV---NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
V +C G++H+ VL EV G +G L + P
Sbjct: 549 DIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMP- 607
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
L K L G +V ++ G+ ++A + ++ I
Sbjct: 608 --TLVKA--LKGKQVRKVVCGSNYTATICLHKPI 637
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 53/186 (28%), Positives = 80/186 (43%)
Query: 93 VFSWGRG-SSGQLGHGE---------MVDALYPKPVTFFDGH-RYTITHISAGWNHSGFV 141
VF WG G LG G M D+ PK + H IS G N++ V
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLK---SHVALDAQSISCGTNYAVLV 314
Query: 142 SDSGCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
+ G +++ G+ + G+LGHG Y H P + F V CG H+ + G
Sbjct: 315 TKQGQMYSWGEESGGRLGHGVCSYVPH--PKLIDEFNGSTVELADCGEFHTCAVTAS--G 370
Query: 200 NQVYGFGSGKR--GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHL 256
+ +Y +G G G LG+ S P +G + I + IS +A +++EG L
Sbjct: 371 D-LYAWGDGDHNAGLLGLGSGA--SHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKL 427
Query: 257 YTWGRG 262
+T+G G
Sbjct: 428 FTFGDG 433
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 269 (99.8 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 111/402 (27%), Positives = 168/402 (41%)
Query: 33 VVK-VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGG 91
V+K + WGA T G+ +D + G H +T G
Sbjct: 257 VLKDIMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQ-----G 311
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF WG G+SG+LG +D +PK V + + ++ + + V++SG L+ G
Sbjct: 312 EVFCWGNGNSGKLGLKVNIDIDHPKRVESLED--VAVRSVACSDHQTCAVTESGELYLWG 369
Query: 152 -DG-TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
DG T Q G S V S V +ACG H+ ++ Q++ +GSG
Sbjct: 370 IDGGTIEQSGSQFLTRKISDVLGGSLT---VLSVACGAWHTAIVTSS---GQLFTYGSGT 423
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------SAE--GHLY 257
G LG + SV+ P+ L ++++ +S +AA+ +A+ G L+
Sbjct: 424 FGVLGHGS--LESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLF 481
Query: 258 TWGRGFNST---SD-----VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHG 309
TWG G +D V GW + L+ G V +G S HG
Sbjct: 482 TWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHG 541
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L P + + ++V L NL V IA+G+ H AV+T + TWG G +GQLG
Sbjct: 542 QLGCPR--AKDKSVNVVL---GNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLG 596
Query: 370 LGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAISRH 410
LG+ D+ P +V LGD + CG T AI H
Sbjct: 597 LGDVRDRNSPVLVEPLGDRLVE-----SIACGLNLTAAICLH 633
Score = 212 (79.7 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 65/226 (28%), Positives = 97/226 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSS------- 87
+++++G+GT G LG G L +CG H A+ ++
Sbjct: 415 QLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNA 474
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
GK+F+WG G G+LGH + L P VT H + +S GW + +S SG +
Sbjct: 475 KSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFI--KVSCGWTLTVALSISGTV 532
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG + S V + + + V IA G H VL GN VY +G
Sbjct: 533 YTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTS--FGN-VYTWGK 589
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G GQLG+ R R+ + +G +E + N + L E
Sbjct: 590 GMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKE 635
Score = 157 (60.3 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG + +CG +AL+ I G V+
Sbjct: 479 KLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALS-----ISGTVY 533
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG D K V G+ R + I++G +H ++ G ++T G
Sbjct: 534 TMGSSIHGQLGCPRAKD----KSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGK 589
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G GQLG GD R +SPV V ++ V IACG+ + + CL ++
Sbjct: 590 GMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAI---CLHKEI 636
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 263 (97.6 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 110/409 (26%), Positives = 164/409 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGA-HVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + L G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLRG--CPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V +A G+RH+L Q +G G SG+
Sbjct: 130 FGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALATTATGSVFQ-WGTGLASSGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
R G + + P GL + V A D SA+L+ G LY WGR G ++
Sbjct: 187 RLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS 246
Query: 267 SDV------NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP-ERVSS 319
V GW H++ T G+V G + +G L E +
Sbjct: 247 RAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEA 306
Query: 320 TRPL----SVALEKVSN-----LDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P+ S+A + N L + +I+ G+EH+ V ++ +WGW EHG G
Sbjct: 307 QKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCC-SWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR---HCLPSQ 415
G + P V +R L V CG+G + A+ + H +P Q
Sbjct: 366 DGTESNVWTPTPVQALPPSPSR--LLLVGCGAGHSLAVCQLPAHPVPCQ 412
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 59/242 (24%), Positives = 93/242 (38%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLLKDCLG 199
VS + LF G ++GQLG G P ++S F + + G HS V+ G
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD---G 67
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
++ G K GQLG+ V + L I ++ D + L+ +G + +
Sbjct: 68 GDLFVCGLNKDGQLGLG--HTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSC 125
Query: 260 GRGFNSTSDV-----NCXXXXXXXXXXXXX---XLGWNHVLVLTGDGEVLMLGGSHHGML 311
G V C G H L T G V G G+
Sbjct: 126 GSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGT---GLA 182
Query: 312 SDPERV--SSTRPLSVALEKVSNLDGVK---VIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
S R+ PL + ++ S + G++ + AG++HSA +T+ + WG +HG
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 367 QL 368
QL
Sbjct: 243 QL 244
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 222 (83.2 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 63/192 (32%), Positives = 95/192 (49%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG H+L L+S G++ +WG GQ G G V DG I I+
Sbjct: 782 ACGAEHILVLSS-----SGQLSAWGGNRFGQCGVGHSFRIANLHQV---DGDWPAIEKIA 833
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACGMRH 189
G HS F+ G L+T G G +GQLGHG R++S+ P +V+ + K V QIACG H
Sbjct: 834 CGQFHSAFICSDGSLWTFGWGVWGQLGHGG-RNNSNQLVPTRVNGLICK-VTQIACGRAH 891
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
++VL +V GSG GQ+GV D + + + +G + + I+ + S
Sbjct: 892 TVVLTDT---GRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG--PLRVRDIATHYYHSIC 946
Query: 250 LSAEGHLYTWGR 261
++ + ++ WGR
Sbjct: 947 ITEDNRVFEWGR 958
Score = 132 (51.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 51/191 (26%), Positives = 80/191 (41%)
Query: 38 SWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQ G G ACG H + S G ++++G
Sbjct: 799 AWGGNRFGQCGVGHSF-RIANLHQVDGDWPAIEKIACGQFHSAFICSD-----GSLWTFG 852
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G GQLGHG ++ P T +G +T I+ G H+ ++D+G + CG G++GQ
Sbjct: 853 WGVWGQLGHGGRNNSNQLVP-TRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQ 911
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG---QLG 214
+G D V IA HS+ + +D N+V+ +G + ++
Sbjct: 912 MGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITED---NRVFEWGRNPQELKMRMF 968
Query: 215 VSKDRIRSVSL 225
V K +IRS L
Sbjct: 969 VMK-KIRSAQL 978
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 54/191 (28%), Positives = 80/191 (41%)
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
IACG H LVL Q+ +G + GQ GV R +L QV IE I+
Sbjct: 781 IACGAEHILVLSSS---GQLSAWGGNRFGQCGVGHS-FRIANLHQVDGDWPAIE--KIAC 834
Query: 243 NGDRSAALSAEGHLYT-----WGR----GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLV 293
SA + ++G L+T WG+ G N+++ + G H +V
Sbjct: 835 GQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVV 894
Query: 294 LTGDGEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
LT G VL+ G +G + D ++V + PL L ++V IA HS
Sbjct: 895 LTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLP--------LGPLRVRDIATHYYHSIC 946
Query: 351 VTENRAIMTWG 361
+TE+ + WG
Sbjct: 947 ITEDNRVFEWG 957
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG +H +TS G +++WG+G QLGHG + + P V +G ++ ++S
Sbjct: 1028 ACGLSHSALITSE-----GTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWV--NVS 1080
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLG 159
G NH+ +D G +F G FGQ G
Sbjct: 1081 LGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 101 (40.6 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 325 VALEKVSN-LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ L +V + LDG ++ +A G HSA++T + TWG G QLG GN +++ P V
Sbjct: 1011 LGLREVKHFLDG-NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQV 1068
Score = 93 (37.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 38/135 (28%), Positives = 56/135 (41%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN---VHQIACGM 187
I+ G H +S SG L G FGQ G G HS + V+ + + +IACG
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVG----HSFRIANLHQVDGDWPAIEKIACGQ 836
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
HS + C ++ FG G GQLG + +P GL ++ I+ +
Sbjct: 837 FHSAFI---CSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIACGRAHT 892
Query: 248 AALSAEGHLYTWGRG 262
L+ G + G G
Sbjct: 893 VVLTDTGRVLVCGSG 907
Score = 90 (36.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+V F++ N+ +ACG+ HS ++ + G +Y +G G QLG R P
Sbjct: 1015 EVKHFLDGNIVSVACGLSHSALITSE--GT-LYTWGKGLDYQLGHGNKNERME--PHQVF 1069
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ + V +S + + A + +G ++ WG+
Sbjct: 1070 EPNGAKWVNVSLGNNHTIASTDDGSVFAWGK 1100
Score = 83 (34.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 31/118 (26%), Positives = 50/118 (42%)
Query: 36 VWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+W++G G GQLG G R + ACG AH + LT G+V
Sbjct: 848 LWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDT-----GRVL 902
Query: 95 SWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
G GS GQ+G + + ++ P+ G + I+ + HS +++ +F G
Sbjct: 903 VCGSGSYGQMGVDDDIKKVFAFTPLPL--GP-LRVRDIATHYYHSICITEDNRVFEWG 957
Score = 80 (33.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/99 (26%), Positives = 41/99 (41%)
Query: 225 LPQVTIGLHDIE------IVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNC 271
+P+ +GL +++ IV ++ SA +++EG LYTWG+G N +
Sbjct: 1006 IPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP 1065
Query: 272 XXXXXXXXXX-XXXXLGWNHVLVLTGDGEVLMLGGSHHG 309
LG NH + T DG V G + G
Sbjct: 1066 HQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFG 1104
Score = 76 (31.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H ++T +G + G L + P +V +G K + ++ G
Sbjct: 1030 GLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP-----HQVFEPNGAKWVNVSLGNN 1084
Query: 347 HSAVVTENRAIMTWGWGEHGQLGL-----GNTCD 375
H+ T++ ++ WG + GQ G+ GN+ D
Sbjct: 1085 HTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSAD 1118
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 267 (99.0 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 81/288 (28%), Positives = 131/288 (45%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T +S G H+ V+ + L+ G +GQLG G + S P V + + V ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV + G +VY G GQLG+ RS + ++ +I +SA + SA
Sbjct: 98 HTLVSTE---GGKVYAAGGNNEGQLGLGDTEERS-TFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM 302
AL+ +G L+ WG G + ++V G+ H +T +G++
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L P ++ + + V + G KV+Q+A G H+ V+TE +A+ T+G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMP---QPVPGIPG-KVVQVACGGGHTVVLTE-KAVYTFGL 268
Query: 363 GEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
G+ GQLGLG + PK + +D ++ + CG T I+
Sbjct: 269 GQFGQLGLGTFLFETSVPKAIE-----HIKDQKISFIACGENHTALIT 311
Score = 233 (87.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 95/345 (27%), Positives = 149/345 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H +T K++ +G + GQLG G P V + + +
Sbjct: 41 SCGDEHTAVVTG-----NNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEK--VKFAA 93
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSL 191
G NH+ ++ G ++ G GQLG GD S+ +S F + + + Q++ G S
Sbjct: 94 CGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVGISANGDRSAAL 250
L +D +++ +G GQ+G+ + + +V +PQ VT+G I IS SA +
Sbjct: 154 ALTED---GELFMWGDNSEGQIGL--ENVTNVCVPQQVTVGK---PISWISCGYYHSAFV 205
Query: 251 SAEGHLYTWGR------GFNSTSDVNCXXXX---XXXXXXXXXXLGWNHVLVLTGDGEVL 301
+ EG LYT+G G + VN G H +VLT + V
Sbjct: 206 TTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLT-EKAVY 264
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + T + A+E + + K+ IA G H+A++T+ + T+G
Sbjct: 265 TFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQ---KISFIACGENHTALITDMGLMYTFG 320
Query: 362 WGEHGQLGLG--NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
G HG+LGLG N+ +Q P L F QL V CG T
Sbjct: 321 DGRHGKLGLGLENSTNQFIP---TLCSNFLRFIVQL-VSCGGCHT 361
Score = 231 (86.4 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 70/230 (30%), Positives = 109/230 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
KV++ G +GQLG G + G++ TS + G++F
Sbjct: 107 KVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSN----TSAALTEDGELF 162
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQ+G + + P+ VT G I+ IS G+ HS FV+ G L+T G+
Sbjct: 163 MWGDNSEGQIGLENVTNVCVPQQVTV--GK--PISWISCGYYHSAFVTTEGQLYTFGEPE 218
Query: 155 FGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G+LG + +H P V K V Q+ACG H++VL + VY FG G+ GQ
Sbjct: 219 CGKLGLPNQLLVNHRMPQPVPGIPGKVV-QVACGGGHTVVLTEKA----VYTFGLGQFGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
LG+ + S+P+ + D +I I+ + +A ++ G +YT+G G
Sbjct: 274 LGLGTFLFET-SVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHI 131
ACGG H + LT + V+++G G GQLG G + + PK + + I+ I
Sbjct: 249 ACGGGHTVVLTEKA------VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK--ISFI 300
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRH 189
+ G NH+ ++D G ++T GDG G+LG G S + P S+F+ V ++CG H
Sbjct: 301 ACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCH 360
Query: 190 SLVLLKDCLG 199
+LV LG
Sbjct: 361 TLVFATPRLG 370
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 195 (73.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 49/143 (34%), Positives = 77/143 (53%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ PK + G I + G N
Sbjct: 133 AHSLIITTE-----GKLWSWGRNDKGQLGHGDTKRLEAPKLIEGL-GEE-VIVAAACGRN 185
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++++G ++T G+ GQLG G+ SP + + + + ++ACG S+++
Sbjct: 186 HTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIV-- 242
Query: 196 DCLGNQVYGFGSGKRGQLGVSKD 218
DC GN +Y FG + GQLG + D
Sbjct: 243 DCKGN-LYSFGCPEYGQLGHNSD 264
Score = 181 (68.8 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 90/346 (26%), Positives = 133/346 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G ACG H LALT G V+
Sbjct: 143 KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE-----NGTVY 197
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++G GQLG G DA+ P T ++G I ++ G S V G L++ G
Sbjct: 198 TFGENKLGQLGQGNQTDAVL-SPATIQYNGQ--PIVKVACGAEFSMIVDCKGNLYSFGCP 254
Query: 154 TFGQLGH---GDYRSHSS---------PVKVSSFVNKNVHQIACGMRHSLVLLKD--CLG 199
+GQLGH G + + + P +V+ F+ K + + V+ +D C
Sbjct: 255 EYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPN--VVARDVACGA 312
Query: 200 N---------QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
N +V+ +G G G+LG ++ + V P++ + L D G I S
Sbjct: 313 NHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYCGYQCS 369
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
ALS G L+ WG S L G + ++V D +
Sbjct: 370 FALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGPS 429
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
G L + + S ++V LDGV Q+ G HS V+
Sbjct: 430 PTFGELGYGDNKPKS---STTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 150 (57.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + + ACG H+L L ++
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G VY FG K GQLG ++ +V P TI + IV ++ + S + +G+L
Sbjct: 194 --GT-VYTFGENKLGQLGQG-NQTDAVLSP-ATIQYNGQPIVKVACGAEFSMIVDCKGNL 248
Query: 257 YTWG 260
Y++G
Sbjct: 249 YSFG 252
Score = 117 (46.2 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 321 RPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
R +++ +EK + + V +A GA H+ V+ + + +WG+G +G+LG D
Sbjct: 283 RRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 342
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++ P++V L D F R +++CG ++A+S
Sbjct: 343 EMVPRLVKLFD-FPGRGAT-QIYCGYQCSFALS 373
Score = 68 (29.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 22/75 (29%), Positives = 30/75 (40%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH LVL V G +G L E+ P L K+ + G QI G +
Sbjct: 311 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP---RLVKLFDFPGRGATQIYCGYQ 367
Query: 347 HSAVVTENRAIMTWG 361
S ++E + WG
Sbjct: 368 CSFALSEMGGLFFWG 382
Score = 56 (24.8 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE-HGQLGLGNTCDQ 376
+++R ++ + V +L G K+ +A G + S +V + + ++WG G+LG G+
Sbjct: 385 NTSRESTMYPKAVQDLCGWKIRSLACG-KSSIIVAADDSTISWGPSPTFGELGYGDN--- 440
Query: 377 IHPKVVNLGDEFQNRDTQL--EVFCGSGFTYAISR 409
PK E + D +V G + I+R
Sbjct: 441 -KPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIAR 474
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 267 (99.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 71/234 (30%), Positives = 109/234 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR + G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH--LYTWGRGFNS 265
G R + + LP ++++ S ++ + A G+ + W + NS
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLE--SHTSEKELIMIAGGNQSILLWIKKENS 380
Score = 247 (92.0 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 73/234 (31%), Positives = 109/234 (46%)
Query: 162 DYRSHSSP-VKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
+Y ++S ++ S + K + QI CG HSL L K G +++ +G GQLGV + +
Sbjct: 120 EYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-K 175
Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNC 271
S + PQ+ L + + ISA S ALS G++Y+WG+ G + D
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235
Query: 272 XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
G +H +LT DG + G HG L + RP VA
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA----- 290
Query: 332 NLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L G +V QIA G H+ A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 291 ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 62/192 (32%), Positives = 96/192 (50%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHIS 132
CG H LAL+ GG++F+WG+ GQLG G + P+ V G + IS
Sbjct: 145 CGDYHSLALSK-----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG--VPLAQIS 197
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG HS +S SG +++ G GQLG G S P + N+ V +ACG HS +
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSAL 257
Query: 193 LLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L +D L ++ FG+GK GQLG +++ +R + ++ +G +I A +
Sbjct: 258 LTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGYRVTQIA--CGRWHTLAYV 311
Query: 251 SAEGHLYTWGRG 262
S G ++++G G
Sbjct: 312 SDLGKVFSFGSG 323
Score = 193 (73.0 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 73/265 (27%), Positives = 111/265 (41%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACG 186
I I+ G HS +S G LF G GQLG G + S ++P V + QI+ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS+ L GN +Y +G + GQLG+ S P + GL + ++ ++ G
Sbjct: 200 EAHSMALSMS--GN-IYSWGKNECGQLGLG--HTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 247 SAALSAEGHLYTWGRG------FNSTSDV--NCXXXXXXXXXXXXXXLGWNHVLVLTGD- 297
SA L+ +G L+T+G G NST + C G H L D
Sbjct: 255 SALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL 314
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G+V G G L + PL V KVS+ + +K+ + E + N++I
Sbjct: 315 GKVFSFGSGKDGQLGNGGTRDQLMPLPV---KVSSSEELKLESHTSEKELIMIAGGNQSI 371
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVV 382
+ W E+ + L T ++ V
Sbjct: 372 LLWIKKENSYVNLKRTIPTLNEGTV 396
Score = 148 (57.2 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L D + + + + L + ++ + Q+T G D
Sbjct: 96 NMKIHSVDQGAEHMLILSSD---GKPFEYDNYSMKHLRF-ESILQEKKIIQITCG--DYH 149
Query: 237 IVGISANGDRSA-ALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLT 295
+ +S G+ A + G L GR F ST+ G H + L+
Sbjct: 150 SLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISA-GEAHSMALS 207
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G + G + G L S P + LD KV +A G HSA++T++
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDP-----SLIEGLDNQKVEFVACGGSHSALLTQDG 262
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ T+G G+HGQLG +T +++ P +V + R TQ+ CG T A
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGYRVTQIA--CGRWHTLA 309
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 266 (98.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 66/193 (34%), Positives = 91/193 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
+++ WG GQLG + + GG H L+ + G V
Sbjct: 138 QLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLS-----LSGVV 192
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S+GQLG G+ D P V G + T++ IS G H+ +S G +FT G G
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK-TVS-ISCGGEHTATLSKGGTVFTFGSG 250
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLGH + P V+ V Q+ CG H+LVL+ L N++Y FG G +GQL
Sbjct: 251 GFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV--ALTNRIYSFGCGMQGQL 308
Query: 214 GVSKDRIRSVSLP 226
G + +SV LP
Sbjct: 309 GNGEQVKQSVPLP 321
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 62/191 (32%), Positives = 89/191 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG H +AL++ G++F WG + GQLG + AL P + IS
Sbjct: 124 ACGDQHSVALSND-----GQLFVWGENAHGQLGLRKE-QALIQSPQHLQSLCGIPVAQIS 177
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG NHS +S SG +F G + GQLG GD P V S K I+CG H+
Sbjct: 178 AGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTAT 237
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L K G V+ FGSG GQLG + ++ P++ L ++ ++ + L A
Sbjct: 238 LSK---GGTVFTFGSGGFGQLG--HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVA 292
Query: 253 -EGHLYTWGRG 262
+Y++G G
Sbjct: 293 LTNRIYSFGCG 303
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 72/241 (29%), Positives = 98/241 (40%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N V QIACG +HS+ L D Q++ +G GQLG+ K++ + PQ L I
Sbjct: 117 NTKVIQIACGDQHSVALSND---GQLFVWGENAHGQLGLRKEQAL-IQSPQHLQSLCGIP 172
Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSD--VNCXXXXXXXXXXXXXXLGW 288
+ ISA G+ S LS G ++ WG G T+D V G
Sbjct: 173 VAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGG 232
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H L+ G V G G L P VA L G KV Q+ G H+
Sbjct: 233 EHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVA-----ELWGSKVSQVTCGRHHT 287
Query: 349 AVVTE--NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
V+ NR I ++G G GQLG G Q P V L + T ++ G ++A
Sbjct: 288 LVLVALTNR-IYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFA 346
Query: 407 I 407
+
Sbjct: 347 L 347
Score = 203 (76.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 74/243 (30%), Positives = 106/243 (43%)
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSS 174
+P+ D + + I+ G HS +S+ G LF G+ GQLG + SP + S
Sbjct: 110 RPLKGLDNTK--VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQS 167
Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
V QI+ G HS VL L V+G+GS GQLG+ R V P + L
Sbjct: 168 LCGIPVAQISAGGNHSFVL---SLSGVVFGWGSNSAGQLGLGDTTDRFV--PTIVKSLSG 222
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRG-F-----NSTSDVNCXXXXXXXXXXXXXXL-- 286
+ V IS G+ +A LS G ++T+G G F NS D + +
Sbjct: 223 KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTC 282
Query: 287 GWNHVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H LVL + G G L + E+V + PL V L N + + +I AG
Sbjct: 283 GRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCE-FTMEKIIAGE 341
Query: 346 EHS 348
+HS
Sbjct: 342 KHS 344
Score = 187 (70.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG+ + GQLG G D +CGG H L+ GG VF+
Sbjct: 192 VFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSK-----GGTVFT 246
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + D +P+ V G + ++ ++ G +H+ V+ + +++ G G
Sbjct: 247 FGSGGFGQLGHNSLKDEHHPRLVAELWGSK--VSQVTCGRHHTLVLVALTNRIYSFGCGM 304
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKN----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GQLG+G+ S P+ V + N + +I G +HS L GN+ S
Sbjct: 305 QGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFALFFKNPGNESTKPKSSMN 364
Query: 211 GQLGVSKDRI 220
G + DR+
Sbjct: 365 GGILTLNDRM 374
Score = 153 (58.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ DG++ + G + HG L + + L + + + +L G+ V QI+AG
Sbjct: 126 GDQHSVALSNDGQLFVWGENAHGQLG----LRKEQALIQSPQHLQSLCGIPVAQISAGGN 181
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HS V++ + + WG GQLGLG+T D+ P +V + T + + CG T
Sbjct: 182 HSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVK---SLSGKKT-VSISCGGEHTAT 237
Query: 407 ISR 409
+S+
Sbjct: 238 LSK 240
Score = 143 (55.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/186 (25%), Positives = 78/186 (41%)
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXX------ 284
GL + +++ I+ S ALS +G L+ WG + +
Sbjct: 114 GLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPV 173
Query: 285 ---XLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
G NH VL+ G V G + G L + P V +L G K + I
Sbjct: 174 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIV-----KSLSGKKTVSI 228
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
+ G EH+A +++ + T+G G GQLG + D+ HP++V + + ++ +Q V CG
Sbjct: 229 SCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLV--AELWGSKVSQ--VTCGR 284
Query: 402 GFTYAI 407
T +
Sbjct: 285 HHTLVL 290
Score = 38 (18.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 208 GKRGQLGVSKDRIRSV 223
GK QL + +++IRS+
Sbjct: 69 GKLKQLDLKREKIRSI 84
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 262 (97.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 73/228 (32%), Positives = 108/228 (47%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG QLG G H ACG H L LTS G+V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD-----GEV 173
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGYN 232
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQL
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQL 289
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 290 GTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 69/287 (24%), Positives = 120/287 (41%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG N + + + +F G G LG GD +S P ++ S K + ++ G +
Sbjct: 53 SAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHI 111
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
VL +V+ +G QLG V ++ L + +++ ++ S L+
Sbjct: 112 VLATT--EGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLT 168
Query: 252 AEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLV-----------LTGDGEV 300
++G ++ WG +N++ V N V+V + GEV
Sbjct: 169 SDGEVFAWG--YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+ G + +G L + P VA L G++V ++A G H+ V+T+ + W
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAA-----LQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF-CGSGFTYA 406
G +GQLG GN +Q +P V + +D +E+ C S T A
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTV-----EKDRIIEIAACHSTHTSA 323
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H++ T+ G+VF+WG + QLG+G L P ++ ++ I ++ G
Sbjct: 108 GPHIVLATTE-----GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVI-EVACGS 161
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLL 194
HS ++ G +F G GQ+G G + P +V+ + NK V IACG + ++
Sbjct: 162 YHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVV 221
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+VY +G GQLG+ + P L I + ++ + L+ EG
Sbjct: 222 DT---GEVYVWGYNGNGQLGLGNSGNQPT--PCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 255 HLYTWG 260
+Y WG
Sbjct: 277 QVYAWG 282
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/179 (26%), Positives = 79/179 (44%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ ACG +A+ G+V
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT-----GEV 226
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + P V G R + ++ G+ H+ ++D G ++ G
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR--VQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
++GQLG G+ + S P V+ ++ + AC H+ G VY +G RGQ
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQ--GGHVYMWGQC-RGQ 340
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 198 (74.8 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 91/349 (26%), Positives = 135/349 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G ACG H LALT G VF
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 222
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++G GQLG G DA+ P P ++G IT ++ G S + G L++ G
Sbjct: 223 AFGENKMGQLGLGNQTDAV-PSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCP 279
Query: 154 TFGQLGHG------------DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN- 200
+GQLGH +Y P +V+ F+ K + + +V C N
Sbjct: 280 EYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANH 339
Query: 201 --------QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRSAA 249
+V+ +G G G+LG ++ + V P++ + L D G I A S A
Sbjct: 340 TLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCSFA 396
Query: 250 LSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHV-LVLTGDGEVLMLGGSH- 307
+S G L+ WG S L +++ D + G S
Sbjct: 397 VSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPT 456
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G L + + S A ++V LDG+ Q+A G HS V+ + +
Sbjct: 457 FGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 502
Score = 195 (73.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 50/147 (34%), Positives = 79/147 (53%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+C AH L +T+ GK++SWGR GQLGHG+ P+ + H I +
Sbjct: 155 SCA-AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALS-HE-AIVLAA 206
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
G NH+ ++D+G +F G+ GQLG G+ SP ++ + + + ++ACG S+
Sbjct: 207 CGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIM-YNGQPITKMACGAEFSM 265
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKD 218
++ DC GN +Y FG + GQLG + D
Sbjct: 266 LM--DCKGN-LYSFGCPEYGQLGHNSD 289
Score = 140 (54.3 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 37/124 (29%), Positives = 64/124 (51%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + ++ + ACG H+L L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G+ V+ FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 219 --GS-VFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 257 YTWG 260
Y++G
Sbjct: 274 YSFG 277
Score = 113 (44.8 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 321 RPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
R +++ +EK + + V V +A GA H+ V+ + + +WG+G +G+LG D
Sbjct: 308 RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 367
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++ P++V L D F R +++ G ++A+S
Sbjct: 368 EMVPRLVKLFD-FPGRGAT-QIYAGYTCSFAVS 398
Score = 71 (30.1 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 24/75 (32%), Positives = 30/75 (40%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH LVL V G +G L E+ P L K+ + G QI AG
Sbjct: 336 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP---RLVKLFDFPGRGATQIYAGYT 392
Query: 347 HSAVVTENRAIMTWG 361
S V+E + WG
Sbjct: 393 CSFAVSEVGGLFFWG 407
Score = 55 (24.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 19/91 (20%), Positives = 43/91 (47%)
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE-HGQLGLGNTCDQ 376
+++R ++ + V +L G ++ +A G + S +V + + ++WG G+LG G+
Sbjct: 410 NTSRESTMYPKAVQDLCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDH--- 465
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
PK E + D G+++++
Sbjct: 466 -KPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 495
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 194 (73.4 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 49/147 (33%), Positives = 79/147 (53%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+C AH L +T+ GK++SWGR GQLGHG+ P+ + H I +
Sbjct: 157 SCA-AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLS-HE-VIVSAA 208
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
G NH+ ++++G +F G+ GQLG G+ SP ++ + + + ++ACG S+
Sbjct: 209 CGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIM-YNGQPITKMACGAEFSM 267
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKD 218
++ DC GN +Y FG + GQLG + D
Sbjct: 268 IM--DCKGN-LYSFGCPEYGQLGHNSD 291
Score = 161 (61.7 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 85/344 (24%), Positives = 127/344 (36%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG---G 91
K+WSWG GQLG G ACG H LALT SV
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 229
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTC 150
K+ G G+ +P+T G +++ G +S + G L
Sbjct: 230 KMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN 289
Query: 151 GDGTF-GQLGHGDYRSHSSPVKVSSFVNKN------------VHQIACGMRHSLVLLKDC 197
DG F + +Y P +V+ F+ K V +ACG H+LVL
Sbjct: 290 SDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQ- 348
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS---ANGDRSAALSAEG 254
+V+ +G G G+LG ++ + V P++ + L D G S A S A+S G
Sbjct: 349 --KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCSFAVSEVG 403
Query: 255 HLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHV-LVLTGDGEVLMLGGSH-HGMLS 312
L+ WG S L +++ D + G S G L
Sbjct: 404 GLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELG 463
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ + S A ++V LDG+ Q+A G HS V+ + +
Sbjct: 464 YGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 504
Score = 142 (55.0 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 37/124 (29%), Positives = 64/124 (51%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + ++ + ACG H+L L +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G+ V+ FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 221 --GS-VFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 257 YTWG 260
Y++G
Sbjct: 276 YSFG 279
Score = 114 (45.2 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 321 RPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
R +++ +EK + + V V +A GA H+ V+ + + +WG+G +G+LG D
Sbjct: 310 RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 369
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++ P++V L D F R +++ G ++A+S
Sbjct: 370 EMVPRLVKLFD-FPGRGAS-QIYAGYTCSFAVS 400
Score = 70 (29.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 24/75 (32%), Positives = 30/75 (40%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G NH LVL V G +G L E+ P L K+ + G QI AG
Sbjct: 338 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP---RLVKLFDFPGRGASQIYAGYT 394
Query: 347 HSAVVTENRAIMTWG 361
S V+E + WG
Sbjct: 395 CSFAVSEVGGLFFWG 409
Score = 55 (24.4 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 19/91 (20%), Positives = 43/91 (47%)
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE-HGQLGLGNTCDQ 376
+++R ++ + V +L G ++ +A G + S +V + + ++WG G+LG G+
Sbjct: 412 NTSRESTMYPKAVQDLCGWRIRSLACG-KSSIIVAADESTISWGPSPTFGELGYGDH--- 467
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
PK E + D G+++++
Sbjct: 468 -KPKSSTAAQEVKTLDGIFSEQVAMGYSHSL 497
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 263 (97.6 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 63/194 (32%), Positives = 95/194 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GRL + G AH +AL+ + G +
Sbjct: 157 ELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALS-----MSGNI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G +P + D + + ++ G +H+ ++ G +FT G G
Sbjct: 212 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK--VEFLACGGSHTALLTKDGLVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLGH ++ P V+ V Q+ACG R H+L + D LG +V+ FGSGK GQ
Sbjct: 270 KYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSD-LG-KVFSFGSGKEGQ 327
Query: 213 LGVSKDRIRSVSLP 226
LG + + LP
Sbjct: 328 LGNGGTHNQLIPLP 341
Score = 247 (92.0 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 76/244 (31%), Positives = 117/244 (47%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K++ QI CG HSL L K G +++ +G GQLGV + S+ PQ+ L + +
Sbjct: 135 KSIIQITCGDYHSLALSKG-QGGELFAWGQNLHGQLGVGR-LFTSIPTPQLVEHLSGVPL 192
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTS--DVNCXXXXXXXXXXXXXXLGWN 289
V ISA S ALS G++Y+WGR G T+ D G +
Sbjct: 193 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGS 252
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE-HS 348
H +LT DG V G +G L + RP V+ L G +V Q+A G+ H+
Sbjct: 253 HTALLTKDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQVACGSRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL--GDE--FQNRDTQLEVFCGSGF 403
A V++ + ++G G+ GQLG G T +Q+ P + L +E F++R ++ E+ +G
Sbjct: 308 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAGG 367
Query: 404 TYAI 407
+I
Sbjct: 368 NQSI 371
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 63/193 (32%), Positives = 98/193 (50%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHIS 132
CG H LAL+ GG++F+WG+ GQLG G + ++ P+ V G + IS
Sbjct: 142 CGDYHSLALSKGQ---GGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSG--VPLVQIS 196
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG HS +S SG +++ G GQLG G P + + N+ V +ACG H+ +
Sbjct: 197 AGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTAL 256
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR---SAA 249
L KD L V+ FG+GK GQLG + ++ P++ L + ++ G R A
Sbjct: 257 LTKDGL---VFTFGAGKYGQLG--HNSTQNELRPRLVTELAGNRVTQVAC-GSRWHTLAY 310
Query: 250 LSAEGHLYTWGRG 262
+S G ++++G G
Sbjct: 311 VSDLGKVFSFGSG 323
Score = 205 (77.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 58/200 (29%), Positives = 89/200 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++SWG GQLG G + E ACGG+H LT G VF+
Sbjct: 211 IYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKD-----GLVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G GQLGH + L P+ VT G+R T + W+ +VSD G +F+ G G
Sbjct: 266 FGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKE 325
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G + P+ + N+ + + L+++ GNQ GK+
Sbjct: 326 GQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAG--GNQSILLWMGKKNPYVN 383
Query: 216 SKDRIRSVSLPQVTIGLHDI 235
+ RI +++ V + D+
Sbjct: 384 LRRRIPTLNEGTVKRWIADV 403
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 49/189 (25%), Positives = 84/189 (44%)
Query: 224 SLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXX 282
S P+ I L ++I + + LS++G + + S C
Sbjct: 82 SKPKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHASRFQCILQEKSIIQIT 141
Query: 283 XXXLGWNHVLVLT-GDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
G H L L+ G G E+ G + HG L R+ ++ P + V +L GV ++Q
Sbjct: 142 ---CGDYHSLALSKGQGGELFAWGQNLHGQLG-VGRLFTSIPTP---QLVEHLSGVPLVQ 194
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
I+AG HS ++ + I +WG + GQLGLG+T + P ++ D N+ + + CG
Sbjct: 195 ISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALD---NQKVEF-LACG 250
Query: 401 SGFTYAISR 409
T +++
Sbjct: 251 GSHTALLTK 259
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 60/238 (25%), Positives = 96/238 (40%)
Query: 167 SSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQV-YGFGSGKRGQLGVSKDRIRSVS 224
S P K K +H + G H L+L D + Y R Q + +++ S
Sbjct: 82 SKPKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHASRFQC-ILQEK----S 136
Query: 225 LPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXX 283
+ Q+T G + + G+ A + G L GR F S
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGV-GRLFTSIPTPQLVEHLSGVPLVQI 195
Query: 284 XXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
G H + L+ G + G + G L P + LD KV +A
Sbjct: 196 SA-GKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFP-----SLIEALDNQKVEFLAC 249
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G H+A++T++ + T+G G++GQLG +T +++ P++V + NR TQ V CGS
Sbjct: 250 GGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVT--ELAGNRVTQ--VACGS 303
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 256 (95.2 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 106/411 (25%), Positives = 162/411 (39%)
Query: 34 VKVWSWGAGTDGQLGTG----RLHDEXXXXXXXXXXXXXXXXXACGGAHV---------- 79
++++SWG G GQLG G R++ G
Sbjct: 48 LQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGIS 107
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
L I G ++ WG+G G+LG G+ P F+ H +I I+ G HS
Sbjct: 108 CGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEH--SIRCIALGGLHSV 165
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
++ G +FT G G FG LGH Y P +V + + IA H+ + +
Sbjct: 166 ALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITES--- 222
Query: 200 NQVYGFGSGKR-GQLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
++Y +G + G+LG+ R + +S+P L + + +S G + AL+ EG
Sbjct: 223 GELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKAL-TVPVASVSCGGFFTMALTKEG 281
Query: 255 HLYTWG--------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
L+ WG RG N G H L LT +G+VL G
Sbjct: 282 QLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHG 341
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
HG L SS R V E + L K++ IA+G SA +T+ + WG +
Sbjct: 342 GHGQLGS----SSLRNQKVPTE-IEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDF 396
Query: 367 QLGLGNTCD-QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
QLG+ + Q P VN E + G ++A+ CL S++
Sbjct: 397 QLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHAL---CLVSRS 444
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 65/207 (31%), Positives = 89/207 (42%)
Query: 75 GGAHV---LALTSP---SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT---FFDGHR 125
GGA+ + TSP S + ++FSWGRG+SGQLG G +YP PV F
Sbjct: 26 GGANTKVPILYTSPDIDSDPVTLQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQS 85
Query: 126 YTITHISA--GWNHSGFVSDSGC-LFTCG---DGTFGQLGHGDYRSHSSPVKVSSFV-NK 178
+++ + S F C LF G DG G GD + S FV N
Sbjct: 86 FSLAQTPGRIDADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNL 145
Query: 179 NV----HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
N H I C L + V+ +G G G LG K R + +P+ D
Sbjct: 146 NPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALG-HKVYTREL-VPRRVDDSWD 203
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR 261
+I I+ +G +AA++ G LY WGR
Sbjct: 204 CKISAIATSGTHTAAITESGELYMWGR 230
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 258 (95.9 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 72/228 (31%), Positives = 106/228 (46%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG QLG G H ACG H L LTS G+V
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD-----GEV 173
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG +SGQ+G G + P+ VT ++ + +I+ G S V D+G ++ G
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGYN 232
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + +P +V++ V ++ACG H+LVL + Q+Y +G+ GQL
Sbjct: 233 GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQL 289
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G +S P V IEI + SAA + GH+Y WG+
Sbjct: 290 GTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336
Score = 184 (69.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 69/287 (24%), Positives = 120/287 (41%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG N + + + +F G G LG GD +S P ++ S K + ++ G +
Sbjct: 53 SAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHI 111
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
VL +V+ +G QLG V ++ L + +++ ++ S L+
Sbjct: 112 VLATT--DGEVFTWGHNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLT 168
Query: 252 AEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLV-----------LTGDGEV 300
++G ++ WG +N++ V N V++ + GEV
Sbjct: 169 SDGEVFAWG--YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+ G + +G L + P VA L G++V ++A G H+ V+T+ I W
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAA-----LQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF-CGSGFTYA 406
G +GQLG GN +Q +P V + +D +E+ C S T A
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVVV-----EKDRIIEIAACHSAHTSA 323
Score = 183 (69.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 57/228 (25%), Positives = 96/228 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GAHVLALTSPSSVIGGKV 93
+++ G G LG G + + G G H++ T+ G+V
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTD-----GEV 120
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG + QLG+G L P ++ ++ I ++ G HS ++ G +F G
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVI-EVACGSYHSLVLTSDGEVFAWGYN 179
Query: 154 TFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQ+G G + P +V+ + NK V IACG S+ ++ +VY +G GQ
Sbjct: 180 NSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT---GEVYVWGYNGNGQ 236
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG+ + P L I + ++ + L+ EG +Y WG
Sbjct: 237 LGLGSSGNQPT--PCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 261 (96.9 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 66/193 (34%), Positives = 90/193 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
+++ WG GQLG + + GG H L+ + G V
Sbjct: 136 QLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLS-----LSGVV 190
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S+GQLG G+ D P V G + T++ IS G H+ +S G +FT G G
Sbjct: 191 FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK-TVS-ISCGGEHTATLSKGGTVFTFGSG 248
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLGH + P V+ V Q+ CG H+LV +D NQ+Y FG G +GQL
Sbjct: 249 GFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVF-EDS-SNQIYSFGCGMQGQL 306
Query: 214 GVSKDRIRSVSLP 226
G + +SV LP
Sbjct: 307 GNGEQVKQSVPLP 319
Score = 212 (79.7 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 70/195 (35%), Positives = 90/195 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHI 131
ACG H +ALT+ G++F WG + GQLG E P+ + G + I
Sbjct: 122 ACGDQHSMALTND-----GQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCG--IPVAQI 174
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG NHS +S SG +F G + GQLG GD P V S K I+CG H+
Sbjct: 175 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTA 234
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVS--KDRI--RSVS------LPQVTIGLHDIEIVGIS 241
L K G V+ FGSG GQLG + KD R V+ + QVT G H + S
Sbjct: 235 TLSK---GGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDS 291
Query: 242 ANGDRSAALSAEGHL 256
+N S +G L
Sbjct: 292 SNQIYSFGCGMQGQL 306
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 77/274 (28%), Positives = 111/274 (40%)
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
++G + DG + D + P+K N+ V QIACG +HS+ L D Q+
Sbjct: 86 EAGAVLLADDGKVLVM---DQSTVCRPLK--GLENRQVIQIACGDQHSMALTND---GQL 137
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
+ +G GQLG+ K++ + S PQ L I + ISA G+ S LS G ++ WG
Sbjct: 138 FVWGENALGQLGLRKEQAGTQS-PQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSN 196
Query: 262 -----GFNSTSD--VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G T+D + G H L+ G V G G L
Sbjct: 197 SAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHN 256
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLGNT 373
P VA L G KV Q+ G H+ V ++ I ++G G GQLG G
Sbjct: 257 SLKDEHHPRLVA-----ELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQ 311
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
Q P V L E T ++ G ++A+
Sbjct: 312 VKQSVPLPVLLPTEC-TEFTMEKLIAGENHSFAL 344
Score = 203 (76.5 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 55/189 (29%), Positives = 84/189 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG+ + GQLG G D +CGG H L+ GG VF+
Sbjct: 190 VFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSK-----GGTVFT 244
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + D +P+ V G + ++ ++ G +H+ F S +++ G G
Sbjct: 245 FGSGGFGQLGHNSLKDEHHPRLVAELWGSK--VSQVTCGRHHTLVFEDSSNQIYSFGCGM 302
Query: 155 FGQLGHGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG+G+ S P+ V + + ++ G HS L GN+ SG G
Sbjct: 303 QGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGENHSFALFFKSPGNESEKPKSGSNG 362
Query: 212 QLGVSKDRI 220
+ DRI
Sbjct: 363 GILTLNDRI 371
Score = 190 (71.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 67/231 (29%), Positives = 99/231 (42%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ I+ G HS +++ G LF G+ GQLG + SP + S V QI+ G
Sbjct: 118 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAG 177
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS VL L V+G+GS GQLG+ R + P + L + V IS G+
Sbjct: 178 GNHSFVL---SLSGVVFGWGSNSAGQLGLGDTTDRFI--PTIVKSLSGKKTVSISCGGEH 232
Query: 247 SAALSAEGHLYTWGRG-F-----NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLT-GD 297
+A LS G ++T+G G F NS D + + G +H LV
Sbjct: 233 TATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSS 292
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
++ G G L + E+V + PL V L + + ++ AG HS
Sbjct: 293 NQIYSFGCGMQGQLGNGEQVKQSVPLPVLLP--TECTEFTMEKLIAGENHS 341
Score = 148 (57.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + LT DG++ + G + G L + + T+ + + + +L G+ V QI+AG
Sbjct: 124 GDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ----SPQHLQSLCGIPVAQISAGGN 179
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HS V++ + + WG GQLGLG+T D+ P +V + T + + CG T
Sbjct: 180 HSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVK---SLSGKKT-VSISCGGEHTAT 235
Query: 407 ISR 409
+S+
Sbjct: 236 LSK 238
Score = 40 (19.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ IS G ++ GF+ + G +L + D P+++ N+ + I CG
Sbjct: 37 VQDISTGKSYVGFIRE-------GTAWILRLHNEDADEKLEPLQLQ---NERIRSIVCGE 86
Query: 188 RHSLVLLKD 196
+++L D
Sbjct: 87 AGAVLLADD 95
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 261 (96.9 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 99/345 (28%), Positives = 154/345 (44%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+S G + GQLG R +CG H +A+ GKVF
Sbjct: 42 RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHK-----GKVF 96
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GS GQLG GE + + P + G + I +S G HS +S+ G +F+ G
Sbjct: 97 AWGAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRN 154
Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G + RS + P KV S + Q+A G HS L L +G+GS + GQ
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQ 211
Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
L +S ++++ +IG L ++ ++ IS + +A L+ EG ++T+G G NS+ +
Sbjct: 212 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG-G-NSSGQLQP 269
Query: 272 XXXXXXXXXXXXXXLG----------WNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSST 320
+G ++ + + G+V+ LG G H S+P +
Sbjct: 270 SPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLGRGPSH--TSNPTHQEAP 327
Query: 321 RPLS--VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
S L +L ++V I AGA H+ VT R T G
Sbjct: 328 AENSDITCLLAAEDLVDIEVKDIFAGA-HANFVTTRRVSHTRSTG 371
Score = 248 (92.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 81/288 (28%), Positives = 134/288 (46%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G +HS + + +++CGD ++GQLG +S P + + + +V ++CG HS+
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAAL 250
+ C +V+ +G+G GQLG+ + + +S +P L I+I+ +S S AL
Sbjct: 88 AV---CHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLAL 142
Query: 251 SAEGHLYTWGR--------GFNSTSD-VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
S +GH+++WGR G NS S + G H L+ G
Sbjct: 143 SEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSF 202
Query: 302 MLGGSHHGMLS-DPERVSST--RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
G + G L+ +V +P S+ K NL VI I+ G EH+AV+TE +
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPHSIGALK--NLS---VIYISCGYEHTAVLTEEGQVF 257
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
T+G GQL Q P+++ + R +Q+E C S T A
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLI---EGIGGRVSQIE--CASYHTIA 300
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 194 (73.4 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 87/312 (27%), Positives = 129/312 (41%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G S GQLG G D L P+ + I I+ G HS ++ +G LF CG G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 157 QLG--HG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
QLG H D + +S F V ++ACG +++L + L V GS GQL
Sbjct: 61 QLGLNHTEDVLCFTLCTALSGFC---VQEVACGWDFTIILGRAGL---VLSCGSNAFGQL 114
Query: 214 GVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD-VN- 270
GV + I L PQ L + + VGI+A + A + G ++ WG G S + V+
Sbjct: 115 GVPQ--ISGPCLIPQKIKSLKE-KAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQ 171
Query: 271 -------------CXXXXXXXXXXXXXXLG-WNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
C L + L G+G + + G + HG L E
Sbjct: 172 GKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKE- 230
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
V P + + S+ K+ + +G H TE + TWG ++GQLG +
Sbjct: 231 VFLVEPKKIDTQFFSH---EKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGR-HAAVY 286
Query: 377 IHPKVVNLGDEF 388
+ +V+ L D F
Sbjct: 287 VADRVIKL-DSF 297
Score = 179 (68.1 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 74/290 (25%), Positives = 111/290 (38%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXX--XXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
GA + GQLG G D A GG H +T G++F G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITG-----AGELFVCG 55
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+GQLG D L T G + + ++ GW+ + + +G + +CG FGQ
Sbjct: 56 HNKAGQLGLNHTEDVLCFTLCTALSG--FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQ 113
Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
LG P K+ S K V IA G+RH+L + L V+ +G+G KR
Sbjct: 114 LGVPQISGPCLIPQKIKSLKEKAVG-IAAGLRHALAATESGL---VFQWGTGMASRAKRV 169
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWG---RGFNSTS 267
G + + P G + + +S + S + + EGHLY WG G +
Sbjct: 170 HQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSK 229
Query: 268 DV------NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGML 311
+V GW H++ T G+V G + +G L
Sbjct: 230 EVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQL 279
Score = 141 (54.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 53/171 (30%), Positives = 79/171 (46%)
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGF 140
LTS S+ G ++ WG GQL E V + PK + T F H I + +GW H
Sbjct: 204 LTSLSTAGEGHLYVWGSNKHGQLVSKE-VFLVEPKKIDTQFFSHE-KIGAVWSGWTHLVA 261
Query: 141 VSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFV--------NKN------VHQIAC 185
+++G +FT G +GQLG H +K+ SF+ KN + QIAC
Sbjct: 262 QTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIAC 321
Query: 186 GMRHSLVLLKDCL---GNQVYGF-GSGKRGQLGVSKDRIRSVSLP-QVTIG 231
G H+L ++ DC G +G G G + V K ++++ Q+ IG
Sbjct: 322 GSEHNLAVVGDCCLSWGWNEHGMCGDGTEANVHVPKP-VKALGYAKQILIG 371
Score = 122 (48.0 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 41/133 (30%), Positives = 62/133 (46%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSD------PERV---SSTRPLSVALEKVSNLDG-V 336
GW H++ T G+V G + +G L +RV S P E N + +
Sbjct: 255 GWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTI 314
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVN-LGDEFQNRDTQ 394
+ QIA G+EH+ V + ++WGW EHG G G + +H PK V LG Q
Sbjct: 315 LLFQIACGSEHNLAVVGD-CCLSWGWNEHGMCGDGTEAN-VHVPKPVKALGYA-----KQ 367
Query: 395 LEVFCGSGFTYAI 407
+ + CG+G + A+
Sbjct: 368 ILIGCGAGHSLAL 380
Score = 71 (30.1 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 39/186 (20%), Positives = 66/186 (35%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V S G+ GQLG ++ A G H LA T G VF
Sbjct: 103 VLSCGSNAFGQLGVPQISGPCLIPQKIKSLKEKAVGIAAGLRHALAATE-----SGLVFQ 157
Query: 96 WGRGSSGQ---LGHGEMVDALYP--KPVTFFDGHRYTITHIS-AGWNHSGFVSDSGCLFT 149
WG G + + + G+ + + +P + +S + + S + G L+
Sbjct: 158 WGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYV 217
Query: 150 CGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G GQL + + + F ++ + + G H L+ +V+ +G
Sbjct: 218 WGSNKHGQLVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTH---LVAQTETGKVFTWGRA 274
Query: 209 KRGQLG 214
GQLG
Sbjct: 275 DYGQLG 280
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 258 (95.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 83/290 (28%), Positives = 130/290 (44%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
HIS G H+ V+ +G L+ G +GQLG G + P V + + CG H
Sbjct: 41 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNH 100
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + GN VY G GQLG+ R+ + ++ + +I ++A SAA
Sbjct: 101 TLVYTEK--GN-VYAAGGNSEGQLGLGDTEERT-TFHLISFFTNQHKIKQLAAGSYTSAA 156
Query: 250 LSAEGHLYTWG---RGFNSTSDVNCXXX---XXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
++ +G L+ WG G +D C G+ H +TGDGE+
Sbjct: 157 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTF 216
Query: 304 GGSHHGMLSD-PERVSSTR---PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G +G L PE++ ++R P+ +EKV+ ++A G EH+ V+TE + T
Sbjct: 217 GEPENGKLGLLPEQLKNSRVPQPVLGIMEKVN--------KVACGGEHTVVLTET-GVYT 267
Query: 360 WGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+G G++GQLG G + PK V ++ V CG T I+
Sbjct: 268 FGLGQYGQLGHGTLLFKTSVPKSVK---HLRSHKIH-NVTCGESHTAVIA 313
Score = 244 (91.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 97/343 (28%), Positives = 149/343 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H +T GK++ +G GQLG G P V + +
Sbjct: 43 SCGDEHTAVVTG-----NGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLA--V 95
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSL 191
G NH+ ++ G ++ G + GQLG GD ++ +S F N++ + Q+A G S
Sbjct: 96 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 155
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAAL 250
+ +D Q++ +G GQ+G++ D+ VS+P QV +G + IS SA +
Sbjct: 156 AVTED---GQLFVWGDNSEGQIGLA-DKT-CVSVPCQVDVGK---PVSSISCGYYHSAFI 207
Query: 251 SAEGHLYTWGRGFNSTSDV------NCXX---XXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
+ +G LYT+G N + N G H +VLT G V
Sbjct: 208 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VY 266
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV--TENRAIMT 359
G +G L + T SV + V +L K+ + G H+AV+ TEN + T
Sbjct: 267 TFGLGQYGQLGHGTLLFKT---SVP-KSVKHLRSHKIHNVTCGESHTAVIADTENGLMFT 322
Query: 360 WGWGEHGQLGLG--NTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
+G G HG+LGLG N +Q P + + F T L V CG
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSF----TVLLVACG 361
Score = 241 (89.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 87/332 (26%), Positives = 142/332 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G + CG H L T G V+
Sbjct: 57 KLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEK-----GNVY 111
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G S GQLG G+ + ++FF +++ I ++AG S V++ G LF GD +
Sbjct: 112 AAGGNSEGQLGLGDTEERTTFHLISFFT-NQHKIKQLAAGSYTSAAVTEDGQLFVWGDNS 170
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G D S P +V V K V I+CG HS + D ++Y FG + G+LG
Sbjct: 171 EGQIGLADKTCVSVPCQVD--VGKPVSSISCGYYHSAFITGD---GELYTFGEPENGKLG 225
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NST--- 266
+ +++++ +PQ +G+ + ++ ++ G+ + L+ G +YT+G G + T
Sbjct: 226 LLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 283
Query: 267 -SDVNCXXXXXXXXXXXXXXLGWNHVLVL--TGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ V G +H V+ T +G + G HG L E +
Sbjct: 284 KTSVPKSVKHLRSHKIHNVTCGESHTAVIADTENGLMFTFGDGRHGKLGLGEE-NFANQF 342
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
AL SN V+ +A G H V R
Sbjct: 343 DPAL--CSNFLSFTVLLVACGGCHMLVFATPR 372
Score = 121 (47.7 bits), Expect = 0.00040, P = 0.00040
Identities = 62/242 (25%), Positives = 102/242 (42%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
V +SG +FT G F + + P K +K VH I+CG H+ V+ GN
Sbjct: 10 VPESGAVFTFGKSNFAE---------NIPSKFWFKNDKPVH-ISCGDEHTAVVT----GN 55
Query: 201 -QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANG-DRSAALSAEGHLY 257
++Y FGS GQLG+ SK+ +R P L E ++ G + + + +G++Y
Sbjct: 56 GKLYMFGSNDWGQLGLGSKNTVRK---PTCVKALKP-EKTKLAVCGRNHTLVYTEKGNVY 111
Query: 258 TWGR------GFNSTSD---VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHH 308
G G T + + G +T DG++ + G +
Sbjct: 112 AAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSE 171
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G + ++ + P V + G V I+ G HSA +T + + T+G E+G+L
Sbjct: 172 GQIGLADKTCVSVPCQVDV-------GKPVSSISCGYYHSAFITGDGELYTFGEPENGKL 224
Query: 369 GL 370
GL
Sbjct: 225 GL 226
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 243 (90.6 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 86/303 (28%), Positives = 127/303 (41%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG S GQLG G D L P+ ++ F I ++ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSG-CIKSVTGGGGHSVVVTDGGGLFVCGL 75
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + + Q+ACG +++L + QV GS GQ
Sbjct: 76 NKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEK---GQVLSCGSNAFGQ 132
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC- 271
LGV + V +PQ L + ++V ++A + A + G + WG G S+ C
Sbjct: 133 LGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTDTGSTFQWGTGLASSGRRLCP 190
Query: 272 --------------XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G +H LT GE+ + G + HG L+ +
Sbjct: 191 GQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS---L 247
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG--LGNTCD 375
++ PL +E KV + +G H TE + TWG ++GQLG LG+
Sbjct: 248 ATFLPLPQRVE-AHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPEA 306
Query: 376 QIH 378
Q H
Sbjct: 307 QKH 309
Score = 207 (77.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 85/320 (26%), Positives = 127/320 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGA-HVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D GG H + +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTD-----GGGLF 71
Query: 95 SWGRGSSGQLGHGEMVDAL---YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
G GQLG G + L KP+ G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLL---G--CPIRQVACGWDFTIMLTEKGQVLSCG 126
Query: 152 DGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG--- 206
FGQLG HG R P + K V +A G+RH+L D +G G
Sbjct: 127 SNAFGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALATT-DTGSTFQWGTGLAS 183
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-- 264
SG+R G + + P GL +V A D SA+L+ G LY WGR +
Sbjct: 184 SGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQ 243
Query: 265 --STSDV-----NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLS----D 313
S + GW H++ T G+V G + +G L
Sbjct: 244 LASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGS 303
Query: 314 PE-RVSSTRPLSVALEKVSN 332
PE + + S+A +++ N
Sbjct: 304 PEAQKHGEQDSSLAFQRLQN 323
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/243 (23%), Positives = 98/243 (40%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLLKDCLG 199
VS + LF G ++GQLG G P ++S F + + G HS+V+ G
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTD---G 67
Query: 200 NQVYGFGSGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
++ G K GQLG+ + + ++ + +G I ++ D + L+ +G + +
Sbjct: 68 GGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGC---PIRQVACGWDFTIMLTEKGQVLS 124
Query: 259 WGRGFNSTSDV-----NCXXXXXXXXXXXXX---XLGWNHVLVLTGDGEVLMLGGSHHGM 310
G V C G H L T G G G+
Sbjct: 125 CGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTDTGSTFQWGT---GL 181
Query: 311 LSDPERV--SSTRPLSVALEKVSNLDGVK---VIQIAAGAEHSAVVTENRAIMTWGWGEH 365
S R+ PL + ++ S + G++ V+ AG++HSA +T+ + WG +H
Sbjct: 182 ASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKH 241
Query: 366 GQL 368
GQL
Sbjct: 242 GQL 244
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 258 (95.9 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 73/226 (32%), Positives = 111/226 (49%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGRG 99
G +DGQLG G +D G H TS + G++F WG
Sbjct: 111 GGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDH----TSAALTEDGRLFLWGDN 166
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
S+GQLG G AL PK + G +I +S G+ HS V+DSG +++ G+ G+LG
Sbjct: 167 SAGQLGFGNDSHALLPKELNM--GQ--SIHWVSCGYRHSALVTDSGDVYSFGESADGRLG 222
Query: 160 HGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
++ +HS P +V S +V Q+ACG +H+L L +D ++Y FG G+ GQLG+
Sbjct: 223 LSAHQLANHSYPQRVESL--HSVLQVACGGKHTLALTED----ELYCFGGGEFGQLGLGT 276
Query: 218 DRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ V+ V +G + ++ SA ++ G LYT+G G
Sbjct: 277 --LVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDG 320
Score = 246 (91.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 84/279 (30%), Positives = 123/279 (44%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
HIS G +HS FV++ G LF GD GQLG + PV V + +ACG H
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV ++ G GQLG+ S+S ++ I +SA SAA
Sbjct: 98 TLVSTSQ---GEILAAGGNSDGQLGLGHCN-DSISFQRLRPFCDYAPIKLLSAGDHTSAA 153
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
L+ +G L+ WG GF + S G+ H ++T G+V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSF 213
Query: 304 GGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G S G L S + + + P ++V +L V +Q+A G +H+ +TE+ + +G
Sbjct: 214 GESADGRLGLSAHQLANHSYP-----QRVESLHSV--LQVACGGKHTLALTEDE-LYCFG 265
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
GE GQLGLG T + V +G + R T V CG
Sbjct: 266 GGEFGQLGLG-TLVFVADSPVAVGHFRKGRVTH--VTCG 301
Score = 225 (84.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 54/162 (33%), Positives = 77/162 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+S+G DG+LG ACGG H LALT +++
Sbjct: 210 VYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTED------ELYC 263
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G GQLG G +V + PV + +TH++ G HS ++DSG L+T GDG
Sbjct: 264 FGGGEFGQLGLGTLV-FVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRH 322
Query: 156 GQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
G+LGHGD + + +P F +V +ACG H LV +
Sbjct: 323 GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLVFAR 364
Score = 188 (71.2 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 85/350 (24%), Positives = 142/350 (40%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG +H +T G++F +G + GQLG P V G R ++
Sbjct: 40 SCGQSHSAFVTEQ-----GRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGER--AQSVA 92
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSL 191
G +H+ + G + G + GQLG G S ++ F + + ++ G S
Sbjct: 93 CGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSA 152
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAAL 250
L +D +++ +G GQLG D LP ++ +G I +S SA +
Sbjct: 153 ALTED---GRLFLWGDNSAGQLGFGNDS--HALLPKELNMGQ---SIHWVSCGYRHSALV 204
Query: 251 SAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL--------GWNHVLVLTGDGEVLM 302
+ G +Y++G + ++ L G H L LT D E+
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTED-ELYC 263
Query: 303 LGGSHHGMLSDPERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
GG G L V + P++V + +V + G +HSA++T++ + T+G
Sbjct: 264 FGGGEFGQLGLGTLVFVADSPVAVGHFRKG-----RVTHVTCGEQHSALITDSGLLYTFG 318
Query: 362 WGEHGQLGLG--NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G HG+LG G N +Q P V E+ + + V CGS +R
Sbjct: 319 DGRHGKLGHGDENFTNQFTPTVCQRFFEY----SVMTVACGSSHMLVFAR 364
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 56/197 (28%), Positives = 90/197 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++ WG + GQLG G +D +CG H AL + S G V+
Sbjct: 159 RLFLWGDNSAGQLGFG--NDSHALLPKELNMGQSIHWVSCGYRHS-ALVTDS----GDVY 211
Query: 95 SWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
S+G + G+LG ++ + YP+ V +++ ++ G H+ +++ L+ G
Sbjct: 212 SFGESADGRLGLSAHQLANHSYPQRVESL----HSVLQVACGGKHTLALTEDE-LYCFGG 266
Query: 153 GTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G FGQLG G + SPV V F V + CG +HS L+ D +Y FG G+ G
Sbjct: 267 GEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHS-ALITD--SGLLYTFGDGRHG 323
Query: 212 QLGVSKDRIRSVSLPQV 228
+LG + + P V
Sbjct: 324 KLGHGDENFTNQFTPTV 340
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 255 (94.8 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 88/303 (29%), Positives = 136/303 (44%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHI 131
A G H L L S G+V S G GQLG G A + + + + +
Sbjct: 29 ASGERHSLLLLS-----NGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDL--V 81
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHS 190
S G HS V G +F G G+ GQLG G+++ ++ P+K+ + + + Q++CG HS
Sbjct: 82 SCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHS 141
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L + G QV+ +GS GQLG+ K + S + PQ L I + ++A G S AL
Sbjct: 142 LALSE---GGQVFSWGSNSDGQLGLGK-KFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL 197
Query: 251 SAEGHLYTWGRGF--------NSTSDVNC---XXXXXXXXXXXXXXLGWNHVLVLTGDGE 299
S G + WGR N+ S + G+ H +VLT +G+
Sbjct: 198 SLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGK 257
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIM 358
V G + +G L + P + V +DG+ V QI G+ H+ A V ++
Sbjct: 258 VFTFGDNTYGQLGHSPTAEKSGP-----QLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVV 311
Query: 359 TWG 361
++G
Sbjct: 312 SFG 314
Score = 241 (89.9 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 76/233 (32%), Positives = 112/233 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXX-XXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WGAG++GQLGTG + +CG H LAL+ GG+V
Sbjct: 96 RVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSE-----GGQV 150
Query: 94 FSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FSWG S GQLG G+ + P+ V DG + ++AG HS +S SG F G
Sbjct: 151 FSWGSNSDGQLGLGKKFPSQASPQRVRSLDG--IPLAQVAAGGAHSFALSLSGTSFGWGR 208
Query: 153 GTFGQLG-HGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
GQL H + S S P +S+ N V I+CG H++VL ++ +V+ FG
Sbjct: 209 NNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQN---GKVFTFGDNT 265
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGR 261
GQLG S +S PQ+ G+ + + I + A + G + ++GR
Sbjct: 266 YGQLGHSPTAEKSG--PQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFGR 315
Score = 223 (83.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 81/290 (27%), Positives = 132/290 (45%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++G HS + +G + +CGD GQLG G S ++ + +V ++CG HS
Sbjct: 29 ASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVSCGKEHS 88
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L + C +V+ +G+G GQLG + + ++ +P L+DI+I +S S AL
Sbjct: 89 LAV---CHKGRVFAWGAGSEGQLGTGEFKETNL-IPMKIKTLNDIKIKQVSCGHYHSLAL 144
Query: 251 SAEGHLYTWGRGFNSTSDVNCXXXXXXXXX-----------XXXXXLGWNHVLVLTGDGE 299
S G +++WG NS + G H L+ G
Sbjct: 145 SEGGQVFSWGS--NSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGT 202
Query: 300 VLMLGGSHHGMLS-DPERVS--STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G ++ G L+ VS S +P S++ K NL VI I+ G EH+ V+T+N
Sbjct: 203 SFGWGRNNAGQLALHKNNVSGQSYKPYSISALK--NLG---VIYISCGYEHTVVLTQNGK 257
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ T+G +GQLG T ++ P++V + +Q++ CGS T A
Sbjct: 258 VFTFGDNTYGQLGHSPTAEKSGPQLV---EGIDGLVSQID--CGSYHTLA 302
Score = 177 (67.4 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 55/200 (27%), Positives = 85/200 (42%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
+ Q A G RHSL+LL + QV+ G RGQLG + S L + L + +
Sbjct: 25 LRQAASGERHSLLLLSN---GQVHSCGDNGRGQLG-QRGAPCSAQLKERIRALETLHVDL 80
Query: 240 ISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCXXXXXXXXXXXXXXLGWNH 290
+S + S A+ +G ++ WG G F T+ + G H
Sbjct: 81 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYH 140
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L L+ G+V G + G L + P + ++V +LDG+ + Q+AAG HS
Sbjct: 141 SLALSEGGQVFSWGSNSDGQLG----LGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFA 196
Query: 351 VTENRAIMTWGWGEHGQLGL 370
++ + WG GQL L
Sbjct: 197 LSLSGTSFGWGRNNAGQLAL 216
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 249 (92.7 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 63/193 (32%), Positives = 88/193 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
+++ WG T GQLG + + GG H L+ + G V
Sbjct: 135 QLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLS-----LSGVV 189
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S+GQLG G+ D P V G + T++ IS G H+ +S G +FT G G
Sbjct: 190 FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK-TVS-ISCGGEHTATLSKGGTVFTFGSG 247
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLGH + P ++ V Q+ CG H+LV + +Y FG G +GQL
Sbjct: 248 GFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEES--SKLIYSFGCGMQGQL 305
Query: 214 GVSKDRIRSVSLP 226
G + +SV LP
Sbjct: 306 GNGEQVKQSVPLP 318
Score = 213 (80.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 75/248 (30%), Positives = 104/248 (41%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P+K S N+ V QIACG +HS+ L D Q++ +G GQLG+ K++ + S PQ
Sbjct: 108 PLK--SLENRQVIQIACGDQHSMALSND---GQLFVWGENTHGQLGLRKEQAGTQS-PQH 161
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD--VNCXXXXXXXXX 280
L +I + ISA G+ S LS G ++ WG G T D V
Sbjct: 162 LQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK 221
Query: 281 XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
G H L+ G V G G L P +A L G KV Q
Sbjct: 222 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIA-----ELWGSKVSQ 276
Query: 341 IAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399
+ G H+ V E+ + I ++G G GQLG G Q P V L E T ++
Sbjct: 277 VTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTEC-TEFTMEKLIT 335
Query: 400 GSGFTYAI 407
G ++A+
Sbjct: 336 GEHHSFAL 343
Score = 203 (76.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 60/192 (31%), Positives = 88/192 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHI 131
ACG H +AL++ G++F WG + GQLG E P+ + + I
Sbjct: 121 ACGDQHSMALSND-----GQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLC--EIPVAQI 173
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG NHS +S SG +F G + GQLG GD + P V S K I+CG H+
Sbjct: 174 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTA 233
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L K G V+ FGSG GQLG + ++ P++ L ++ ++ +
Sbjct: 234 TLSK---GGTVFTFGSGGFGQLG--HNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFE 288
Query: 252 AEGHL-YTWGRG 262
L Y++G G
Sbjct: 289 ESSKLIYSFGCG 300
Score = 195 (73.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 53/189 (28%), Positives = 84/189 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG+ + GQLG G D +CGG H L+ GG VF+
Sbjct: 189 VFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSK-----GGTVFT 243
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + D +P+ + G + ++ ++ G +H+ F S +++ G G
Sbjct: 244 FGSGGFGQLGHNSLKDEHHPRLIAELWGSK--VSQVTCGRHHTLVFEESSKLIYSFGCGM 301
Query: 155 FGQLGHGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG+G+ S P+ V + + ++ G HS L GN+ SG G
Sbjct: 302 QGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLITGEHHSFALFFKNPGNESEKPKSGSNG 361
Query: 212 QLGVSKDRI 220
+ DR+
Sbjct: 362 GILTLNDRM 370
Score = 193 (73.0 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 66/210 (31%), Positives = 94/210 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ I+ G HS +S+ G LF G+ T GQLG + SP + S V QI+ G
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAG 176
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS VL L V+G+GS GQLG+ + R V P + L + V IS G+
Sbjct: 177 GNHSFVL---SLSGVVFGWGSNSAGQLGLGDTKDRFV--PTIVKSLCGKKTVSISCGGEH 231
Query: 247 SAALSAEGHLYTWGRG-F-----NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDG 298
+A LS G ++T+G G F NS D + + G +H LV
Sbjct: 232 TATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESS 291
Query: 299 EVLM-LGGSHHGMLSDPERVSSTRPLSVAL 327
+++ G G L + E+V + PL V L
Sbjct: 292 KLIYSFGCGMQGQLGNGEQVKQSVPLPVLL 321
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ISAG + GF+ + G + +L + D P+++ N+ + I CG
Sbjct: 36 VQDISAGKSCIGFIRE-------GKVSVLRLHNEDADEKLEPLQLQ---NERIRSIVCGE 85
Query: 188 RHSLVLLKD 196
+++L D
Sbjct: 86 AGAVLLADD 94
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 248 (92.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 86/304 (28%), Positives = 130/304 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
A G H L L S G V S G S GQLG P+ + + + +S
Sbjct: 29 ASGEHHSLLLLSD-----GTVQSCGDNSRGQLGRKGTPRGEQPERIPALE--TLNVALVS 81
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSL 191
G HS V G +F G + GQLG G+++ + P K+ + + Q+ACG HS+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSV 141
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L +D QV+ +G+ GQLG+ K+ S + PQ L I + ++A G S ALS
Sbjct: 142 ALSED---GQVFSWGTNSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAAGGHHSFALS 197
Query: 252 AEGHLYTWGR---GFNSTSDVNC--------XXXXXXXXXXXXXXLGWNHVLVLTGDGEV 300
G + WG G + S N G+ H VLT DG+V
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKV 257
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMT 359
G + +G L P + V ++G+ V QI G++H+ A + +++
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGP-----QLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVS 311
Query: 360 WGWG 363
+G G
Sbjct: 312 FGRG 315
Score = 237 (88.5 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 73/292 (25%), Positives = 134/292 (45%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T+ ++G +HS + G + +CGD + GQLG P ++ + NV ++CG
Sbjct: 24 TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCG 83
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HSL + C +V+ +G+ GQLG+ + + + +P+ L I+I+ ++
Sbjct: 84 KEHSLAV---CHKGRVFAWGAASEGQLGIGEFK-ETTFIPKKIKTLAGIKIIQVACGHYH 139
Query: 247 SAALSAEGHLYTWGR--------GFNSTSDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGD 297
S ALS +G +++WG G S + G +H L+
Sbjct: 140 SVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLS 199
Query: 298 GEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G G + G L+ + V +P+S+ K + V+ I+ G +H+AV+T++
Sbjct: 200 GTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKT-----LGVVSISCGYKHTAVLTQD 254
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ T+G +GQLG T ++ P++V + + +Q++ CGS T A
Sbjct: 255 GKVFTFGDNSYGQLGHDPTAEKRGPQLV---ERIEGLVSQID--CGSDHTLA 301
Score = 232 (86.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 71/234 (30%), Positives = 106/234 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXX-XXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WGA ++GQLG G + ACG H +AL+ G+V
Sbjct: 95 RVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSED-----GQV 149
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FSWG S GQLG G E P+ V +G + ++AG +HS +S SG F G
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEG--IPLAQVAAGGHHSFALSLSGTSFGWGS 207
Query: 153 GTFGQL---GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQL G+ PV + + V I+CG +H+ VL +D +V+ FG
Sbjct: 208 NSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQD---GKVFTFGDNS 264
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRG 262
GQLG D PQ+ + + + I D + A + G + ++GRG
Sbjct: 265 YGQLG--HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 240 (89.5 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 90/324 (27%), Positives = 129/324 (39%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS----GFVSDSGCLFTCG 151
WG SGQLG G A PK + G + + G +H+ F + SG + G
Sbjct: 55 WGNNESGQLGDGTTTSAATPKRLRL--GFATYSSGFATGASHTLAIARFDNVSG-VRAWG 111
Query: 152 DGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQ+G + S+PVK+ F V Q+A G HS+ L G V+ +GS
Sbjct: 112 SNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALA----GGTVWAWGSNS 166
Query: 210 RGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQL ++ + P QV I I A G S A ++ Y WG
Sbjct: 167 AGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLG 225
Query: 264 NSTSDVNCXXXXX---XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N T+ N G +H L L G + G + +G L + + +
Sbjct: 226 NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQS 285
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P+ + L + + G I + AG HS V N + TWG+ G L +G T DQ+ P
Sbjct: 286 TPVQLTLP--AGVTGF--IDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPA 341
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFT 404
V D + V GS FT
Sbjct: 342 QVRDASNVPFTDVERVVLLGSFFT 365
Score = 197 (74.4 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 90/379 (23%), Positives = 140/379 (36%)
Query: 20 AKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHV 79
+ P Q + + WG GQLG G A G +H
Sbjct: 36 SSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHT 95
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
LA+ +V G V +WG S+GQ+G PV G + ++AG HS
Sbjct: 96 LAIARFDNVSG--VRAWGSNSAGQIGRDPATVPTSSTPVKI-GGFGGAVQQVAAGGLHSM 152
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSF-VNKNVHQIACGMRHSLVLLKD 196
++ G ++ G + GQL S + +P +V + + I G HS+
Sbjct: 153 ALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS- 210
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+ Y +G+ GQLG S +PQ I I ISA G + AL + G +
Sbjct: 211 ---TEAYAWGNNASGQLG--NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAI 265
Query: 257 YTWGR------GFNSTSDVNC---XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSH 307
+ WG G +T++ + G +H + + + V G +
Sbjct: 266 WAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT 325
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE--H 365
G+LS P V SN+ V ++ +V +N + W WG +
Sbjct: 326 LGLLSVGTTGDQLSPAQV--RDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGY 383
Query: 366 GQLGLGNTCDQIHPKVVNL 384
GQLG G T ++ P V L
Sbjct: 384 GQLGDGTTSNRTAPVQVAL 402
Score = 169 (64.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 71/292 (24%), Positives = 115/292 (39%)
Query: 129 THISA-GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
T IS+ ++HS + L G+ GQLG G S ++P ++ A G
Sbjct: 33 TSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGA 92
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+L + + + V +GS GQ+G + + S P V IG + ++A G S
Sbjct: 93 SHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTP-VKIGGFGGAVQQVAAGGLHS 151
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCXXXXXXXX-----------XXXXXXLGWNHVLVLTG 296
AL A G ++ WG +N G +H + T
Sbjct: 152 MAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
E G + G L + +S+ P +KV + + +I+AG H+ + A
Sbjct: 211 T-EAYAWGNNASGQLGNGTTLSNHMP-----QKVQLPSSITIRKISAGGSHNLALDSTGA 264
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
I WG +GQLG G T +Q P + L ++VF G + A++
Sbjct: 265 IWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGF---IDVFAGPSHSVAVA 313
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/199 (27%), Positives = 84/199 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+ ++WG GQLG G + GG+H LAL S G ++
Sbjct: 212 EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDST-----GAIW 266
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG+G + P +T G I + AG +HS V+ + ++T G T
Sbjct: 267 AWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFID-VFAGPSHSVAVASNFTVYTWGFNT 325
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN---KNVHQIAC-GMRHSLVLLKDCLGNQVYGF-GSGK 209
G L G SP +V N +V ++ G ++V G +G+ G G+
Sbjct: 326 LGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQ 385
Query: 210 RGQLGVSKDRIR--SVSLP 226
G G + +R V+LP
Sbjct: 386 LGD-GTTSNRTAPVQVALP 403
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 240 (89.5 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 90/324 (27%), Positives = 129/324 (39%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS----GFVSDSGCLFTCG 151
WG SGQLG G A PK + G + + G +H+ F + SG + G
Sbjct: 55 WGNNESGQLGDGTTTSAATPKRLRL--GFATYSSGFATGASHTLAIARFDNVSG-VRAWG 111
Query: 152 DGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQ+G + S+PVK+ F V Q+A G HS+ L G V+ +GS
Sbjct: 112 SNSAGQIGRDPATVPTSSTPVKIGGFGGA-VQQVAAGGLHSMALA----GGTVWAWGSNS 166
Query: 210 RGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQL ++ + P QV I I A G S A ++ Y WG
Sbjct: 167 AGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLG 225
Query: 264 NSTSDVNCXXXXX---XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N T+ N G +H L L G + G + +G L + + +
Sbjct: 226 NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQS 285
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P+ + L + + G I + AG HS V N + TWG+ G L +G T DQ+ P
Sbjct: 286 TPVQLTLP--AGVTGF--IDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPA 341
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFT 404
V D + V GS FT
Sbjct: 342 QVRDASNVPFTDVERVVLLGSFFT 365
Score = 197 (74.4 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 90/379 (23%), Positives = 140/379 (36%)
Query: 20 AKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHV 79
+ P Q + + WG GQLG G A G +H
Sbjct: 36 SSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHT 95
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
LA+ +V G V +WG S+GQ+G PV G + ++AG HS
Sbjct: 96 LAIARFDNVSG--VRAWGSNSAGQIGRDPATVPTSSTPVKI-GGFGGAVQQVAAGGLHSM 152
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSF-VNKNVHQIACGMRHSLVLLKD 196
++ G ++ G + GQL S + +P +V + + I G HS+
Sbjct: 153 ALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS- 210
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+ Y +G+ GQLG S +PQ I I ISA G + AL + G +
Sbjct: 211 ---TEAYAWGNNASGQLG--NGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAI 265
Query: 257 YTWGR------GFNSTSDVNC---XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSH 307
+ WG G +T++ + G +H + + + V G +
Sbjct: 266 WAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT 325
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE--H 365
G+LS P V SN+ V ++ +V +N + W WG +
Sbjct: 326 LGLLSVGTTGDQLSPAQV--RDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGY 383
Query: 366 GQLGLGNTCDQIHPKVVNL 384
GQLG G T ++ P V L
Sbjct: 384 GQLGDGTTSNRTAPVQVAL 402
Score = 169 (64.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 71/292 (24%), Positives = 115/292 (39%)
Query: 129 THISA-GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
T IS+ ++HS + L G+ GQLG G S ++P ++ A G
Sbjct: 33 TSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGA 92
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+L + + + V +GS GQ+G + + S P V IG + ++A G S
Sbjct: 93 SHTLAIARFDNVSGVRAWGSNSAGQIGRDPATVPTSSTP-VKIGGFGGAVQQVAAGGLHS 151
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCXXXXXXXX-----------XXXXXXLGWNHVLVLTG 296
AL A G ++ WG +N G +H + T
Sbjct: 152 MAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTS 210
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
E G + G L + +S+ P +KV + + +I+AG H+ + A
Sbjct: 211 T-EAYAWGNNASGQLGNGTTLSNHMP-----QKVQLPSSITIRKISAGGSHNLALDSTGA 264
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
I WG +GQLG G T +Q P + L ++VF G + A++
Sbjct: 265 IWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGF---IDVFAGPSHSVAVA 313
Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/199 (27%), Positives = 84/199 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+ ++WG GQLG G + GG+H LAL S G ++
Sbjct: 212 EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDST-----GAIW 266
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG+G + P +T G I + AG +HS V+ + ++T G T
Sbjct: 267 AWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFID-VFAGPSHSVAVASNFTVYTWGFNT 325
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN---KNVHQIAC-GMRHSLVLLKDCLGNQVYGF-GSGK 209
G L G SP +V N +V ++ G ++V G +G+ G G+
Sbjct: 326 LGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQ 385
Query: 210 RGQLGVSKDRIR--SVSLP 226
G G + +R V+LP
Sbjct: 386 LGD-GTTSNRTAPVQVALP 403
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 167 (63.8 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 49/158 (31%), Positives = 79/158 (50%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--- 179
G + + + G H D L++ G+ GQLG GD S + P V +F K+
Sbjct: 205 GDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLT 264
Query: 180 VHQIACGMRHSLVLL--KDC-LGNQV-YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD- 234
V+ IACG H+ +L K+ G + + FG G+ GQLG ++ S SLP+ L +
Sbjct: 265 VYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNK--SSSLPEPVSDLPEH 322
Query: 235 IEIVGISANGDRSAALSAEGHLYTWG--RGFNSTSDVN 270
+V + ++ +S+EG++++WG RG DVN
Sbjct: 323 AYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVN 360
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 55/195 (28%), Positives = 83/195 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEX---XXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G ACG H LT G
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 93 VFSW--GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT- 149
W G G +GQLGH + P+PV+ H Y ++ + G H+ VS G +++
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVS-VDCGLFHTSVVSSEGYVWSW 347
Query: 150 --------CGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLG 199
C D F ++ GD S P K+S ++ + Q++CG H+ VL+ D G
Sbjct: 348 GMERGLGLCPDVNFTEVEAGD---DSVPRKISGGSSRFRDPVQVSCGAAHT-VLVVDG-G 402
Query: 200 NQVYGFGSGKRGQLG 214
+++ +G G+ G LG
Sbjct: 403 YKLWSWGRGRNGVLG 417
Score = 150 (57.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF---FDGHRYTIT 129
A G AH +ALT G V+SWGRG G+LG G+ D L P V F +G R I
Sbjct: 22 AAGEAHTIALTGD-----GCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIV 76
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
++AG HS VSD G ++ G +GQLG D + +P + + +
Sbjct: 77 GVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFER 124
Score = 140 (54.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGK------VFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHR 125
ACG HV+AL P + ++SWG GQLG G+ P+ V TF
Sbjct: 203 ACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSG 262
Query: 126 YTITHISAGWNHSGFVS--------DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV- 176
T+ I+ G +H+ ++ S C +T G G GQLGH +S S P VS
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSIC-WTFGFGENGQLGHRSNKSSSLPEPVSDLPE 321
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
+ + + CG+ H+ V+ + V+ +G +RG LG+ D
Sbjct: 322 HAYLVSVDCGLFHTSVVSSE---GYVWSWGM-ERG-LGLCPD 358
Score = 129 (50.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + LTGDG V G G L + P+ V + D ++++ +AAGA
Sbjct: 24 GEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAY 83
Query: 347 HSAVVTENRAIMTWGWGEHGQLG 369
HS V+++ ++ WG+ +GQLG
Sbjct: 84 HSLAVSDDGSVWCWGYNIYGQLG 106
Score = 128 (50.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 55/191 (28%), Positives = 89/191 (46%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVS--------D 143
++SWG GQLG G+ P+ V TF T+ I+ G +H+ ++
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQV 202
S C +T G G GQLGH +S S P VS + + + CG+ H+ V+ + V
Sbjct: 289 SIC-WTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSE---GYV 344
Query: 203 YGFGSGKRGQLGVSKD-RIRSV-----SLPQ-VTIGLHDI-EIVGISANGDRSAALSAEG 254
+ +G +RG LG+ D V S+P+ ++ G + V +S + + G
Sbjct: 345 WSWGM-ERG-LGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGG 402
Query: 255 H-LYTWGRGFN 264
+ L++WGRG N
Sbjct: 403 YKLWSWGRGRN 413
Score = 108 (43.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 42/140 (30%), Positives = 63/140 (45%)
Query: 287 GWNHVLVLTGDGE--------VLML---GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
G HV+ L G G+ V +L G +HHG L + S RP +V E + G
Sbjct: 205 GDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTV--ETFNQKSG 262
Query: 336 VKVIQIAAGAEHSAVVTENRAI-------MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
+ V IA GA H+A++T + T+G+GE+GQLG + P+ V+ +
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVS---DL 319
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
+ V CG T +S
Sbjct: 320 PEHAYLVSVDCGLFHTSVVS 339
Score = 103 (41.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 168 SP-VKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRGQLGVSK--DRIRSV 223
SP + +S +++ + +A G H++ L D C VY +G G G+LG K D + V
Sbjct: 5 SPTLLISEDLSRKIISLAAGEAHTIALTGDGC----VYSWGRGMFGRLGTGKESDELVPV 60
Query: 224 --SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
P G I IVG++A S A+S +G ++ WG
Sbjct: 61 LVEFPNQAEG-DRIRIVGVAAGAYHSLAVSDDGSVWCWG 98
Score = 96 (38.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK------NVH 181
I ++AG H+ ++ GC+++ G G FG+LG G PV V F N+ +
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVE-FPNQAEGDRIRIV 76
Query: 182 QIACGMRHSLVLLKD----CLGNQVYG 204
+A G HSL + D C G +YG
Sbjct: 77 GVAAGAYHSLAVSDDGSVWCWGYNIYG 103
Score = 82 (33.9 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 339 IQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+Q++ GA H+ +V + + +WG G +G LG GN D P +V
Sbjct: 386 VQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 80 (33.2 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 25/74 (33%), Positives = 30/74 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LGTG+ DE G A S + G V+
Sbjct: 37 VYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWC 96
Query: 96 WGRGSSGQLGH-GE 108
WG GQLG GE
Sbjct: 97 WGYNIYGQLGFDGE 110
Score = 77 (32.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 312 SDPE-RVSSTRPLSVALE-KVSNLDGVKVIQIAAGAEHSAVVT-------ENR----AIM 358
S+P+ R+S T S+ + + + G V+++A G EH + +N +
Sbjct: 174 SEPDPRLSFT---SIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLY 230
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
+WG HGQLGLG+ + P+ V ++ ++ T ++ CG+ T
Sbjct: 231 SWGNNHHGQLGLGDGESRARPQTVETFNQ-KSGLTVYDIACGAHHT 275
Score = 71 (30.1 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNL-DGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G +G L SS+ P E VS+L + ++ + G H++VV+ + W W
Sbjct: 295 GFGENGQLGHRSNKSSSLP-----EPVSDLPEHAYLVSVDCGLFHTSVVSSEGYV--WSW 347
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDE 387
G LGL C ++ V GD+
Sbjct: 348 GMERGLGL---CPDVNFTEVEAGDD 369
Score = 55 (24.4 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLL------KDCLGNQ--VYGFGSGKRGQLGVSKDRI 220
P + F + V ++ACG H + L+ KD + +Y +G+ GQLG+
Sbjct: 188 PFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGES 247
Query: 221 RS 222
R+
Sbjct: 248 RA 249
Score = 39 (18.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
ER +S+ L+ + +V + +KV + AG+ S + + WG
Sbjct: 123 ERETSSSSLNDSGREVGS--DLKVCTVKAGSMMSLAIDNVGGLWMWG 167
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 246 (91.7 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 87/320 (27%), Positives = 136/320 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H +T GK+F +G + GQLG G P V R +T +
Sbjct: 42 SCGDEHTALVTE-----NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLT--A 94
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHS 190
G H+ + G L+ CG GQLG GD +S + F NK + +A G S
Sbjct: 95 CGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTS-FHLVEFFNKQGPIKMLAAGSNTS 153
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L +D ++Y +G GQ+G+ K+ +++ +V++G + +S SA +
Sbjct: 154 AALTQD---GRLYMWGDNSEGQIGLGKES-NALTPQEVSVGKR---VFWVSCGYYHSAFV 206
Query: 251 SAEGHLYTWGR------GFNSTSDVNCXXXXXXXXX---XXXXXLGWNHVLVLTGDGEVL 301
+ +G LYT+G G ++ N G H + LT + EV
Sbjct: 207 TVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT-ENEVY 265
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + +R V V + +V A G H+A++T+N + T+G
Sbjct: 266 SFGLGQFGQLGHGTFIFESRLPRV----VEHFRKGRVKHAACGENHTALITDNGLLYTFG 321
Query: 362 WGEHGQLGLG--NTCDQIHP 379
G HG+LGLG N +Q P
Sbjct: 322 DGRHGKLGLGEENFTNQFKP 341
Score = 239 (89.2 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 80/286 (27%), Positives = 128/286 (44%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
IS G H+ V+++G LF G +GQLG G + + P V + ++ V ACG H+
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LV GN +Y G GQLG+ R+ S V I ++A + SAAL
Sbjct: 101 LVFTSR--GN-LYACGGNNEGQLGLGDCNDRT-SFHLVEFFNKQGPIKMLAAGSNTSAAL 156
Query: 251 SAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG 304
+ +G LY WG G S+ G+ H +T DG + G
Sbjct: 157 TQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWVSCGYYHSAFVTVDGALYTFG 216
Query: 305 GSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G L E++++ + ++V+++ +V+Q+A G H+ +TEN + ++G G
Sbjct: 217 EKDSGKLGLSTEKLANHK----VPQQVTDIPD-RVVQVACGGGHTVALTENE-VYSFGLG 270
Query: 364 EHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLG G + P+VV + F+ + CG T I+
Sbjct: 271 QFGQLGHGTFIFESRLPRVV---EHFRKGRVK-HAACGENHTALIT 312
Score = 238 (88.8 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 78/286 (27%), Positives = 124/286 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G ACG H L TS G ++
Sbjct: 56 KLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSR-----GNLY 110
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ D V FF+ + I ++AG N S ++ G L+ GD +
Sbjct: 111 ACGGNNEGQLGLGDCNDRTSFHLVEFFN-KQGPIKMLAAGSNTSAALTQDGRLYMWGDNS 169
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G G + +P +VS V K V ++CG HS + D +Y FG G+LG
Sbjct: 170 EGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYHSAFVTVD---GALYTFGEKDSGKLG 224
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FNS 265
+S +++ + +PQ + D +V ++ G + AL+ E +Y++G G F
Sbjct: 225 LSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALT-ENEVYSFGLGQFGQLGHGTFIF 282
Query: 266 TSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGML 311
S + G NH ++T +G + G HG L
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKL 328
Score = 218 (81.8 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 48/126 (38%), Positives = 71/126 (56%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHI 131
ACGG H +ALT +V+S+G G GQLGHG + ++ P+ V F R + H
Sbjct: 250 ACGGGHTVALTE------NEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGR--VKHA 301
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRH 189
+ G NH+ ++D+G L+T GDG G+LG G+ + + P F++ +VH + CG H
Sbjct: 302 ACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361
Query: 190 SLVLLK 195
LVL K
Sbjct: 362 MLVLAK 367
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 50/213 (23%), Positives = 97/213 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G G+ + +CG H +T + G ++
Sbjct: 161 RLYMWGDNSEGQIGLGK--ESNALTPQEVSVGKRVFWVSCGYYHSAFVT-----VDGALY 213
Query: 95 SWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++G SG+LG ++ + P+ VT + ++ G H+ ++++ +++ G
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVALTENE-VYSFGL 269
Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G FGQLGHG + S P V F V ACG H+ ++ + L +Y FG G+ G
Sbjct: 270 GQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGL---LYTFGDGRHG 326
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
+LG+ ++ + P + D + ++ G
Sbjct: 327 KLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGG 359
Score = 147 (56.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 71/281 (25%), Positives = 121/281 (43%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACGMRHSLVLLKDCLG 199
+ +SG +FT G F ++P K ++ +V +I+CG H+ ++ ++
Sbjct: 9 IPESGAVFTFGKSKFAD---------NAPSKF--WLKNDVPLRISCGDEHTALVTEN--- 54
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG-DRSAALSAEGHLYT 258
+++ FGS GQLG+ +V+ P L E V ++A G + ++ G+LY
Sbjct: 55 GKLFMFGSNNWGQLGLGTKT--TVNKPTCVKALKS-ERVKLTACGRTHTLVFTSRGNLYA 111
Query: 259 WG---RGFNSTSDVNCXXXXXXXXXXXXX------XLGWNHVLVLTGDGEVLMLGGSHHG 309
G G D N G N LT DG + M G + G
Sbjct: 112 CGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEG 171
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ + ++ P V++ G +V ++ G HSA VT + A+ T+G + G+LG
Sbjct: 172 QIGLGKESNALTPQEVSV-------GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLG 224
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
L +T + KV + +R Q V CG G T A++ +
Sbjct: 225 L-STEKLANHKVPQQVTDIPDRVVQ--VACGGGHTVALTEN 262
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 246 (91.7 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 73/267 (27%), Positives = 116/267 (43%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++ +WG G +GQLGHG+ + + PK + + IT + G H+ ++ +G +++
Sbjct: 823 GELLTWGVGENGQLGHGDTNNQIEPKIIQSLTS--FWITQVQCGEKHTICLTKNGKVYSW 880
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLG GD HSSP++VS+ NV QIA G H VL +V FG+G
Sbjct: 881 GASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTS---KEVLVFGNG-- 935
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
+G + VSLP + L + I + +AA++ G +YTWG G N
Sbjct: 936 AAMGAAS----VVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGN 991
Query: 265 STSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
ST G H LT G + G G L +P
Sbjct: 992 STETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG-DQNKP-- 1048
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
+++ +L I ++ G ++ +
Sbjct: 1049 ---KRIESLTKTTFISVSCGENYNVAL 1072
Score = 172 (65.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 53/202 (26%), Positives = 88/202 (43%)
Query: 38 SWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
+WG G +GQLG G +++ CG H + LT GKV+SWG
Sbjct: 827 TWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK-----NGKVYSWG 881
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G++ P V+ + +Y + I++G H ++ S + G+G
Sbjct: 882 ASEYGQLGLGDVTQHSSPMQVSALE--KYNVLQIASGSTHCAVLTTSKEVLVFGNGA--- 936
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR-GQLGVS 216
G S P V S ++ ++ CG +S + +C VY +G+G+ G G S
Sbjct: 937 -AMGAASVVSLPTLVPSLKYLHIDRLCCG-HYSTAAITEC--GDVYTWGTGQELGHGGNS 992
Query: 217 KDR-------IRSVSLPQVTIG 231
+ +R+ S+ Q++ G
Sbjct: 993 TETSPKLIEALRNQSIRQISCG 1014
Score = 167 (63.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 55/197 (27%), Positives = 89/197 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
KV+SWGA GQLG G + A G H LT+ V+ VF
Sbjct: 876 KVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVL---VF 932
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDG 153
G G++ +G +V P T +Y I + G + +++ G ++T G G
Sbjct: 933 --GNGAA--MGAASVVSL----P-TLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG 983
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+LGHG + +SP + + N+++ QI+CG RH+ L D +++ G GQL
Sbjct: 984 Q--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHT-AFLTD--SGRIFTCGKDSFGQL 1038
Query: 214 G-VSKDRIRSVSLPQVT 229
G +S D+ + + +T
Sbjct: 1039 GQMSGDQNKPKRIESLT 1055
Score = 150 (57.9 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 63/231 (27%), Positives = 104/231 (45%)
Query: 147 LFTCGDGTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN-QV 202
L T G + +LG +S +P ++ +F ++ I+ G +S VL ++ G+ +
Sbjct: 715 LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTEN--GDVYL 772
Query: 203 YGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+G G+ K + + +I LP L D+ V +S AA+ A G L TWG
Sbjct: 773 WGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFCHGAAVRANGELLTWGV 830
Query: 262 GFNST---SDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G N D N + G H + LT +G+V G S +G L
Sbjct: 831 GENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGL 890
Query: 314 PERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ + P+ V ALEK + V+QIA+G+ H AV+T ++ ++ +G G
Sbjct: 891 GDVTQHSSPMQVSALEKYN------VLQIASGSTHCAVLTTSKEVLVFGNG 935
Score = 143 (55.4 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 53/228 (23%), Positives = 91/228 (39%)
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-KRGQLGVSKDRIRSVSLPQVTIG 231
SS N ++ S + L G +G S K G +KD+ S P+
Sbjct: 688 SSPPNGQSPSLSSTAHRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQ--SQPTPERLPN 745
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST-----------SDVNCXXXXXXXXX 280
+ +I IS+ S+ L+ G +Y WGRG T D
Sbjct: 746 FNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD 805
Query: 281 XXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+G+ H + +GE+L G +G L + + P + + +L + Q
Sbjct: 806 VVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEP-----KIIQSLTSFWITQ 860
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
+ G +H+ +T+N + +WG E+GQLGLG+ P V+ +++
Sbjct: 861 VQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY 908
Score = 127 (49.8 bits), Expect = 0.00030, P = 0.00030
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 293 VLTGDGEVLMLG-GSHHG----MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
VLT +G+V + G G+ +L P+ P LE +S+ V+ ++ G H
Sbjct: 763 VLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFK--LESLSD-----VVSVSIGFCH 815
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
A V N ++TWG GE+GQLG G+T +QI PK++ F TQ++ CG T +
Sbjct: 816 GAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWI--TQVQ--CGEKHTICL 871
Query: 408 SRH 410
+++
Sbjct: 872 TKN 874
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 241 (89.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 62/193 (32%), Positives = 84/193 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKV 93
+++ WG GQLG + + GG H L+ + G V
Sbjct: 138 QLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLS-----LSGVV 192
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S+GQLG G+ D P V R I IS G H+ ++ G +FT G G
Sbjct: 193 FGWGGNSAGQLGLGDTTDRFVPTVVNSLK--RKKIVSISCGGEHTAALAKGGTVFTFGSG 250
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLGH ++ P V+ V Q+ CG H+LV +Y FG G +GQL
Sbjct: 251 GFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLV--STASPKLIYSFGCGMQGQL 308
Query: 214 GVSKDRIRSVSLP 226
G + +SV LP
Sbjct: 309 GNGEQVKQSVPLP 321
Score = 219 (82.2 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 75/255 (29%), Positives = 107/255 (41%)
Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
D + SP+K N+ V QIACG +HS+ L D Q++ +G GQLG+ K++
Sbjct: 104 DKSTECSPLK--GLENRQVIQIACGDQHSMALTND---GQLFVWGENALGQLGLRKEQAG 158
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD--VNCXX 273
+ S P+ L I + ISA G+ S LS G ++ WG G T+D V
Sbjct: 159 TQS-PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVV 217
Query: 274 XXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
G H L G V G G L P VA L
Sbjct: 218 NSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVA-----EL 272
Query: 334 DGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
G KV Q+ G H+ V T + + I ++G G GQLG G Q P V+ E+ +
Sbjct: 273 WGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEY 332
Query: 393 TQLEVFCGSGFTYAI 407
T ++ G ++A+
Sbjct: 333 TIQKLVAGENHSFAL 347
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 63/192 (32%), Positives = 92/192 (47%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHI 131
ACG H +ALT+ G++F WG + GQLG E P+ + G + I
Sbjct: 124 ACGDQHSMALTND-----GQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCG--IPVAQI 176
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG NHS +S SG +F G + GQLG GD P V+S K + I+CG H+
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTA 236
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L K G V+ FGSG GQLG + + P++ L ++ ++ + + +
Sbjct: 237 ALAK---GGTVFTFGSGGFGQLG--HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVST 291
Query: 252 AEGHL-YTWGRG 262
A L Y++G G
Sbjct: 292 ASPKLIYSFGCG 303
Score = 204 (76.9 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 72/231 (31%), Positives = 102/231 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ I+ G HS +++ G LF G+ GQLG + SP + S V QI+ G
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAG 179
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS VL L V+G+G GQLG+ R V P V L +IV IS G+
Sbjct: 180 GNHSFVL---SLSGVVFGWGGNSAGQLGLGDTTDRFV--PTVVNSLKRKKIVSISCGGEH 234
Query: 247 SAALSAEGHLYTWGRG-F-----NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDG 298
+AAL+ G ++T+G G F NS D + + G NH LV T
Sbjct: 235 TAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASP 294
Query: 299 EVLM-LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+++ G G L + E+V + PL V N D + ++ AG HS
Sbjct: 295 KLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYN-DEYTIQKLVAGENHS 344
Score = 195 (73.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 53/172 (30%), Positives = 77/172 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG + GQLG G D +CGG H AL GG VF+
Sbjct: 192 VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAK-----GGTVFT 246
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG--CLFTCGDG 153
+G G GQLGH D +P+ V G + ++ ++ G NH+ VS + +++ G G
Sbjct: 247 FGSGGFGQLGHNSFKDEHHPRLVAELWGSK--VSQVTCGRNHT-LVSTASPKLIYSFGCG 303
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKN----VHQIACGMRHSLVLLKDCLGNQ 201
GQLG+G+ S P+ V N + ++ G HS L LGN+
Sbjct: 304 MQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFALYFKELGNE 355
Score = 152 (58.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + LT DG++ + G + G L + + T+ + + +L G+ V QI+AG
Sbjct: 126 GDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ----SPRHLQSLCGIPVAQISAGGN 181
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HS V++ + + WG GQLGLG+T D+ P VVN R + + CG T A
Sbjct: 182 HSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNS----LKRKKIVSISCGGEHTAA 237
Query: 407 ISR 409
+++
Sbjct: 238 LAK 240
Score = 130 (50.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 48/155 (30%), Positives = 69/155 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++G+G GQLG DE CG H L T+ +I +S
Sbjct: 244 VFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLI----YS 299
Query: 96 WGRGSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+G G GQLG+GE V P PV T ++ YTI + AG NHS F L+
Sbjct: 300 FGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDE-YTIQKLVAGENHS-FA-----LY---- 348
Query: 153 GTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACG 186
F +LG+ ++ P + + +F N + Q CG
Sbjct: 349 --FKELGN---EANPDPTRGIMTFDNGMIEQCECG 378
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 240 (89.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 74/229 (32%), Positives = 110/229 (48%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V++ G +GQLG G D GA+ TS + GK+F
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGAN----TSAALTEDGKLFM 163
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQ+G + + P VT G I+ IS G+ HS FV+ G L+T G+
Sbjct: 164 WGDNSEGQIGLEDKSNVCIPHEVTV--GK--PISWISCGYYHSAFVTMDGELYTFGEPEN 219
Query: 156 GQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LG + +H SP +V + + V Q+ACG H++VL + VY FG G+ GQL
Sbjct: 220 GKLGLPNELLMNHRSPQRVLG-IPERVIQVACGGGHTVVLTEKV----VYAFGLGQFGQL 274
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ + S P++ + D +I IS + +A ++ G LYT+G G
Sbjct: 275 GLGTFLFET-SEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322
Score = 239 (89.2 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 78/282 (27%), Positives = 123/282 (43%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ V+ + L+ G +GQLG G + P + + + V ACG H+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LV D G VY G GQLG+ R + Q+ I +SA + SAAL
Sbjct: 100 LVST-DTGG--VYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSAGANTSAAL 155
Query: 251 SAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG 304
+ +G L+ WG G S+V G+ H +T DGE+ G
Sbjct: 156 TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFG 215
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+G L P + + ++V + +VIQ+A G H+ V+TE + + +G G+
Sbjct: 216 EPENGKLGLPNELLMNHR---SPQRVLGIPE-RVIQVACGGGHTVVLTE-KVVYAFGLGQ 270
Query: 365 HGQLGLGNTC-DQIHPKVVNLGDEFQNRDTQL-EVFCGSGFT 404
GQLGLG + PK++ + +D ++ + CG T
Sbjct: 271 FGQLGLGTFLFETSEPKIIE-----RIKDQKICHISCGENHT 307
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 87/341 (25%), Positives = 147/341 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H +T K++ +G + GQLG G + P + + + +
Sbjct: 41 SCGDEHTAIVTG-----NNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLA--A 93
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSL 191
G NH+ +D+G ++ G GQLG GD + ++ F + + Q++ G S
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAAL 250
L +D +++ +G GQ+G+ +D+ +V +P +VT+G I IS SA +
Sbjct: 154 ALTED---GKLFMWGDNSEGQIGL-EDK-SNVCIPHEVTVGK---PISWISCGYYHSAFV 205
Query: 251 SAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL---------GWNHVLVLTGDGEVL 301
+ +G LYT+G N + + G H +VLT + V
Sbjct: 206 TMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVY 264
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + T + +E++ + K+ I+ G H+A++TE + T+G
Sbjct: 265 AFGLGQFGQLGLGTFLFETSEPKI-IERIKDQ---KICHISCGENHTALMTELGLLYTFG 320
Query: 362 WGEHGQLGLG--NTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
G HG+LGLG N +Q P L F QL + CG
Sbjct: 321 DGRHGKLGLGMENFTNQFFP---TLCSNFLRFAVQL-IACG 357
Score = 210 (79.0 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 66/228 (28%), Positives = 106/228 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDT----GG-VY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ D + FF TI +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD-TIKQLSAGANTSAALTEDGKLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G D + P +V+ V K + I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMD---GELYTFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ + + + PQ +G+ + ++ ++ G + L+ E +Y +G G
Sbjct: 224 LPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLT-EKVVYAFGLG 269
Score = 176 (67.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 47/130 (36%), Positives = 66/130 (50%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHI 131
ACGG H + LT V+++G G GQLG G + + PK + + I HI
Sbjct: 249 ACGGGHTVVLTEKV------VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQK--ICHI 300
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRH 189
S G NH+ +++ G L+T GDG G+LG G ++ + P S+F+ V IACG H
Sbjct: 301 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Query: 190 SLVLLKDCLG 199
LV LG
Sbjct: 361 MLVFATPRLG 370
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/194 (23%), Positives = 90/194 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXX-XACGGAHVLALTSPSSVIGGKV 93
K++ WG ++GQ+G L D+ +CG H +T + G++
Sbjct: 160 KLFMWGDNSEGQIG---LEDKSNVCIPHEVTVGKPISWISCGYYHSAFVT-----MDGEL 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+++G +G+LG + + P G + ++ G H+ +++ ++ G G
Sbjct: 212 YTFGEPENGKLGLPNELLMNHRSPQRVL-GIPERVIQVACGGGHTVVLTEK-VVYAFGLG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG G + +S K+ + ++ + I+CG H+ ++ + LG +Y FG G+ G+
Sbjct: 270 QFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE--LG-LLYTFGDGRHGK 326
Query: 213 LGVSKDRIRSVSLP 226
LG+ + + P
Sbjct: 327 LGLGMENFTNQFFP 340
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 73/280 (26%), Positives = 115/280 (41%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
V D+G +FT G F + + P K F N ++CG H+ ++ + N
Sbjct: 8 VPDTGAVFTFGKTKFAE---------NIPSKFW-FKNDIPICLSCGDEHTAIVTGN---N 54
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTW 259
++Y FGS GQLG+ ++ P L E V ++A G +S + G +Y
Sbjct: 55 KLYMFGSNNWGQLGLGSKA--AIIKPTCIKALKP-EKVKLAACGRNHTLVSTDTGGVYAA 111
Query: 260 GR------GFNSTSDVNCXXXXXXXXXXXXX---XLGWNHVLVLTGDGEVLMLGGSHHGM 310
G G T D + G N LT DG++ M G + G
Sbjct: 112 GGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQ 171
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
+ ++ + P V + G + I+ G HSA VT + + T+G E+G+LGL
Sbjct: 172 IGLEDKSNVCIPHEVTV-------GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGL 224
Query: 371 GNTCDQIH--PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
N H P+ V LG + ++V CG G T ++
Sbjct: 225 PNELLMNHRSPQRV-LGIP----ERVIQVACGGGHTVVLT 259
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 235 (87.8 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 68/228 (29%), Positives = 108/228 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ACG H +AL + G++F
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD-----GELF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + +I+ G S V DSG ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HTKRVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
SK+ + S + Q+ + + + + SAA + GH+Y WG+
Sbjct: 267 TGSKNNLLSPT--QIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 73/281 (25%), Positives = 118/281 (41%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSG-PHVLLTTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +PV+V ++ + K V ++ACG HS+ L D +++ +G
Sbjct: 101 HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD---GELFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +VT LH +V I+ S A+ G +Y WG G
Sbjct: 158 GQVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA-GAEH-SAVVTENRAIMTWG 361
+ +EK +VI+IAA + H SA T+ + WG
Sbjct: 277 TQIMVEKE------RVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 189 (71.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 58/186 (31%), Positives = 86/186 (46%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G HVL T G V++WG QLG+G + P V + I ++ G
Sbjct: 84 GPHVLLTTED-----GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVI-EVACGS 137
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
+HS ++ G LF G GQ+G G + +P KV++ ++ K V IACG S+ +L
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVL 197
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+VYG+G GQLG+ + + P LH + + I + AL+ EG
Sbjct: 198 DS---GEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHGMCVNQIVCGYAHTLALTDEG 252
Query: 255 HLYTWG 260
LY WG
Sbjct: 253 LLYAWG 258
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 66/266 (24%), Positives = 111/266 (41%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLL 194
N + +V+D+ +F G LG GD +S P K+ + K + ++ G H L+
Sbjct: 32 NEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + VY +G QLG + ++ QV L +++ ++ S AL+A+G
Sbjct: 92 EDGV---VYAWGHNGYSQLGNGTTN-QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 255 HLYTWGR------GFNSTSD-------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
L+ WG G ST++ NC G + + GEV
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIA----CGQTSSMAVLDSGEVY 203
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + +G L + P+ VA L G+ V QI G H+ +T+ + WG
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRVAA-----LHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDE 387
+GQLG G+ + + P + + E
Sbjct: 259 ANTYGQLGTGSKNNLLSPTQIMVEKE 284
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 48/179 (26%), Positives = 76/179 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
++++WG GQ+G+G ++ ACG +A+ G+V
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLD-----SGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG G + SP ++ + + AC H+ G VY +G RGQ
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQ--GGHVYMWGQC-RGQ 316
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 56/221 (25%), Positives = 93/221 (42%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ L +I +S L+ E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYA 98
Query: 259 WGR-GF----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHG 309
WG G+ N T++ + G +H + L DGE+ G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSN-LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N L +V+ IA G S V ++ + WG+ +GQL
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHGMCVN-----QIVCGYAHTLALT 249
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 156 (60.0 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 54/177 (30%), Positives = 83/177 (46%)
Query: 91 GKVFSWG--RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G+V++WG R + G LG + + P +Y I ++ G +H F+ + G +F
Sbjct: 184 GEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVF 243
Query: 149 TCGDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+G QLG R + F ++V IA G H L KD N++ +G
Sbjct: 244 AWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKD---NKLVSWGL 300
Query: 208 GKRGQLGVSKDRIRS--VSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR 261
+ GQ GVS+D V+ P+ + L D + I I+A S LS +G LY+ GR
Sbjct: 301 NQFGQCGVSEDVEDGALVTKPK-RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGR 356
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 59/211 (27%), Positives = 93/211 (44%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM----VDALYPKPVTFFDGHRYTI 128
A G H+L L G VF+WG G QLG M + L P+P G R+ +
Sbjct: 227 APGKDHILFLDEE-----GMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF----GLRH-V 276
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG----DYRSHSSPVKVSSFVNKNVHQIA 184
+I++G NH ++ L + G FGQ G D + P +++ N + IA
Sbjct: 277 KYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIA 336
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI------------RSVSLPQVTIGL 232
G HSL+L +D +Y G ++G+ KD + R+V LP L
Sbjct: 337 AGEHHSLILSQD---GDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTK---L 390
Query: 233 HDI-EIVGISANGDRSAALSAEGHLYTWGRG 262
+++ + ++A S A++ G Y+WG G
Sbjct: 391 NNVPKFKSVAAGSHHSVAVAQNGIAYSWGFG 421
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 59/222 (26%), Positives = 87/222 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG G QLG + A G H ALT + K+
Sbjct: 242 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDN-----KLV 296
Query: 95 SWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
SWG GQ G E V+ AL KP I I+AG +HS +S G L++CG
Sbjct: 297 SWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGR 356
Query: 153 GTFGQLG--------------HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++G HG R+ P K+++ V K +A G HS+ + ++ +
Sbjct: 357 LDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNN-VPK-FKSVAAGSHHSVAVAQNGI 414
Query: 199 GNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVG 239
+GFG LG +D + H+I +VG
Sbjct: 415 AYS-WGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVG 455
Score = 100 (40.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 64/280 (22%), Positives = 105/280 (37%)
Query: 161 GDYRS-HSSPVKV--SSFV----NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK--RG 211
GD S+P K+ SF V Q+A S L + +VY +G+ + G
Sbjct: 141 GDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSN---GEVYAWGTFRCNEG 197
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
LG +D+I+ P IV ++ D L EG ++ WG G +
Sbjct: 198 ILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKV 257
Query: 272 XXXXXXXXXX---------XXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS--- 319
G NH LT D +++ G + G E V
Sbjct: 258 MERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGAL 317
Query: 320 -TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN------ 372
T+P +AL D V + IAAG HS +++++ + + G + ++G+
Sbjct: 318 VTKPKRLALP-----DNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEY 372
Query: 373 TCDQIHPKV--VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
T +H K V L + N V GS + A++++
Sbjct: 373 TYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQN 412
Score = 97 (39.2 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHH---GMLSD--PERV-SSTRPLSVALEKVSNLDGV-KVI 339
G +H L+L+ DG++ G G+ D PE + A+ + L+ V K
Sbjct: 338 GEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFK 397
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD--QIHPKVVNLGDEFQNRDTQLEV 397
+AAG+ HS V +N +WG+GE +GLG D ++ ++ N + N + V
Sbjct: 398 SVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNI---ILV 454
Query: 398 FCGSGFT 404
CG F+
Sbjct: 455 GCGGQFS 461
Score = 67 (28.6 bits), Expect = 4.2e-17, Sum P(3) = 4.2e-17
Identities = 27/104 (25%), Positives = 39/104 (37%)
Query: 7 EETEKGKSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXX-- 64
++ K ++ I NA+ Q + ++ WG G+ +LG G L
Sbjct: 19 KKMSKTHASHIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPF 78
Query: 65 ---XXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
A GG H LAL S+V +SWG G LG
Sbjct: 79 LPRDEAKIISFAVGGMHTLALDEESNV-----WSWGCNDVGALG 117
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 234 (87.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 68/228 (29%), Positives = 108/228 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ACG H +AL + G++F
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAAD-----GELF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + +I+ G S V DSG ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HTKKVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
SK+ + S + Q+ + + + + SAA + GH+Y WG+
Sbjct: 267 TGSKNNLLSPT--QIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 212 (79.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 73/281 (25%), Positives = 119/281 (42%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G R +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSG-PHVLLSTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +P++V ++ + K V ++ACG HS+ L D +++ +G
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAAD---GELFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +VT LH ++V I+ S A+ G +Y WG G
Sbjct: 158 GQVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA-GAEH-SAVVTENRAIMTWG 361
+ +EK +VI+IAA + H SA T+ + WG
Sbjct: 277 TQIMVEKE------RVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 189 (71.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 57/186 (30%), Positives = 86/186 (46%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G HVL T G V++WG QLG+G + P V + + ++ G
Sbjct: 84 GPHVLLSTED-----GVVYAWGHNGYSQLGNGTTNQGIAPIQVCT-NLLVKQVVEVACGS 137
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
+HS ++ G LF G GQ+G G + +P KV++ ++ K V IACG S+ +L
Sbjct: 138 HHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVL 197
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+VYG+G GQLG+ + + P LH + + I + AL+ EG
Sbjct: 198 DS---GEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHGVCVNQIVCGYAHTLALTDEG 252
Query: 255 HLYTWG 260
LY WG
Sbjct: 253 LLYAWG 258
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/262 (25%), Positives = 109/262 (41%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLLKDCL 198
+V+DS +F G LG GD +S P K+ + K + ++ G H L+ +D +
Sbjct: 36 YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGV 95
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
VY +G QLG + ++ QV L ++V ++ S AL+A+G L+
Sbjct: 96 ---VYAWGHNGYSQLGNGTTN-QGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFA 151
Query: 259 WGR------GFNSTSD-------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
WG G ST++ NC G + + GEV G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIA----CGQTSSMAVLDSGEVYGWGY 207
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ +G L + P+ VA L GV V QI G H+ +T+ + WG +
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAA-----LHGVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 366 GQLGLGNTCDQIHPKVVNLGDE 387
GQLG G+ + + P + + E
Sbjct: 263 GQLGTGSKNNLLSPTQIMVEKE 284
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 48/179 (26%), Positives = 76/179 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
++++WG GQ+G+G ++ ACG +A+ G+V
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLD-----SGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HGVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG G + SP ++ + + AC H+ G VY +G RGQ
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQ--GGHVYMWGQC-RGQ 316
Score = 145 (56.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ L I +S LS E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 259 WGR-GF----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHG 309
WG G+ N T++ + G +H + L DGE+ G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSN-LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N L KV+ IA G S V ++ + WG+ +GQL
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHGVCVN-----QIVCGYAHTLALT 249
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 235 (87.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/229 (30%), Positives = 109/229 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+S G + GQLG +CG H +A+ G+VF
Sbjct: 48 RVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQ-----GRVF 102
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GS GQLG GE + + P + G + I +S G HS +S+ G +F+ G
Sbjct: 103 TWGAGSEGQLGIGESKEISFMPTKINSLAGIK--IIQVSCGHYHSLALSEDGQVFSWGSN 160
Query: 154 TFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ S +SP KV S + Q+A G HS L +G +G+G+ + GQ
Sbjct: 161 RQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFAL--SLMGTS-FGWGNNRSGQ 217
Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
L +S + + +IG L + +V IS + ++ L+ +G ++T+G
Sbjct: 218 LALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 266
Score = 207 (77.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 72/288 (25%), Positives = 127/288 (44%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G HS + + +++CGD + GQLG +S P + + ++ ++CG HS+
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSV 93
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ C +V+ +G+G GQLG+ + + S +P L I+I+ +S S ALS
Sbjct: 94 AV---CHQGRVFTWGAGSEGQLGIGESKEISF-MPTKINSLAGIKIIQVSCGHYHSLALS 149
Query: 252 AEGHLYTWGR--------GFNSTSDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVLM 302
+G +++WG G N S + G H L+ G
Sbjct: 150 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 209
Query: 303 LGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G + G L+ + + +P S+ K N V+ I+ G EH++V+TE+ + T
Sbjct: 210 WGNNRSGQLALSGNSAKEQIYKPHSIGALKTLN-----VVYISCGYEHTSVLTEDGQVFT 264
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
+G QL + P+++ +G +Q+E CGS T A
Sbjct: 265 FGGSSSEQLQHSPRSGRGGPQLIEGIGGHV----SQIE--CGSYHTIA 306
Score = 188 (71.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 59/221 (26%), Positives = 97/221 (43%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P ++ + + + A G RHSL+L + ++VY G RGQLG + S P+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSN---HRVYSCGDNSRGQLGQKSPQ--STKRPEP 73
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVN---CXXXXXXXX 279
L + I +S + S A+ +G ++TWG G + +++
Sbjct: 74 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI 133
Query: 280 XXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
G H L L+ DG+V G + G L + S + +KV +L+G+ +
Sbjct: 134 KIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCS----QASPQKVKSLEGIPLA 189
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGL-GNTC-DQIH 378
Q+AAG HS ++ WG GQL L GN+ +QI+
Sbjct: 190 QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIY 230
Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 64/235 (27%), Positives = 91/235 (38%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+SWG+ GQLG G L + A GG H AL+ + G
Sbjct: 153 QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS-----LMGTS 207
Query: 94 FSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG SGQL G KP + + +IS G+ H+ +++ G +FT G
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 267
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ QL H P + + +V QI CG H++ + QV G RG
Sbjct: 268 SSSEQLQHSPRSGRGGPQLIEG-IGGHVSQIECGSYHTIAYVYTT--GQVVSLG---RGP 321
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
S + + VT L ++V I D A A + T R STS
Sbjct: 322 SCTSNATHQEAACSDVTCLLSAKDLVDIEVK-DIFAG--AHANFVTTCRHTRSTS 373
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 187 (70.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 41/133 (30%), Positives = 66/133 (49%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ I+ G HS ++D+G L T G G +GQ G G SP VSS + + ++A G+
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGL 372
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+ D G+ VY FG + GQLG D+ ++ L ++ + IS +
Sbjct: 373 WHTTCASSD--GD-VYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHT 429
Query: 248 AALSAEGHLYTWG 260
A ++ EG ++ WG
Sbjct: 430 AVITDEGRVFCWG 442
Score = 182 (69.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 49/145 (33%), Positives = 73/145 (50%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACGG H +T +++ F WG GQ G G D L P V+ G R I ++
Sbjct: 317 ACGGRHSAVITDTGALL---TFGWGL--YGQCGQGSTDDELSPTCVSSLLGIR--IEEVA 369
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHS 190
AG H+ S G ++ G FGQLG G ++ + P ++ + N NV I+CG RH+
Sbjct: 370 AGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHT 429
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGV 215
V+ + +V+ +G K GQLG+
Sbjct: 430 AVITDE---GRVFCWGWNKYGQLGI 451
Score = 180 (68.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 50/158 (31%), Positives = 70/158 (44%)
Query: 240 ISANGDRSAALSAEGHLYT--WGR----GFNSTSDV---NCXXXXXXXXXXXXXXLGWNH 290
I+ G SA ++ G L T WG G ST D C W H
Sbjct: 316 IACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLW-H 374
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ DG+V GG+ G L + T P L + NL+ V V I+ GA H+AV
Sbjct: 375 TTCASSDGDVYAFGGNQFGQLGTGCDQAETLP---KLLEAPNLENVNVKTISCGARHTAV 431
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
+T+ + WGW ++GQLG+G+ D+ P V + D F
Sbjct: 432 ITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCF 469
Score = 151 (58.2 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 50/159 (31%), Positives = 71/159 (44%)
Query: 38 SWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
++G G GQ G G DE A G H T SS G V+++G
Sbjct: 334 TFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT---TCASS--DGDVYAFG 388
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GQLG G + + L PK + + + IS G H+ ++D G +F G +G
Sbjct: 389 GNQFGQLGTGCDQAETL-PKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYG 447
Query: 157 QLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHSLVL 193
QLG GD ++P V++ KN IACG H+L+L
Sbjct: 448 QLGIGDVIDRNAPAEVRIKDCFPKN---IACGWWHTLLL 483
Score = 129 (50.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ------ 340
GW + G+G++ + GS ++S P + P S S ++ V+Q
Sbjct: 257 GWGY----GGEGQLGL--GSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLG 310
Query: 341 -----IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
IA G HSAV+T+ A++T+GWG +GQ G G+T D++ P V+
Sbjct: 311 SYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVS 358
Score = 95 (38.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 66/271 (24%), Positives = 101/271 (37%)
Query: 12 GKSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXX 71
G SA + K Q+VV +W + G Q E
Sbjct: 11 GTSAAATPKEEKEEEEVVSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSG 70
Query: 72 XACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITH 130
CG A+ + S GK+ +WG S+ LG + + + P F +
Sbjct: 71 GGCG----FAMATAES---GKLITWG--STDDLGQSYVTSGKHGETPEPFPLPPEVCVQK 121
Query: 131 ISAGWNHSGFVSDSGCLFTCG------DG-TFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
AGW H V+++ ++T G G FGQ+ GD S + SF + V
Sbjct: 122 AEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVD-GD-----SCERNISFSTEQVSSS 175
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSG---KRGQLGVSK---------DRIRSVSLPQVTIG 231
+ G + S +QV G G G K+ ++ SK D I +LP +
Sbjct: 176 SQGKKSS-----GGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSL 230
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ IV ++A G + ALS G ++ WG G
Sbjct: 231 APGVRIVSVAAGGRHTLALSDIGQVWGWGYG 261
Score = 93 (37.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 42/173 (24%), Positives = 66/173 (38%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-GKRGQLGVSKDRIRSVSL 225
SS V+ + V +IACG RHS V+ D +G+G G+ GQ G + D +
Sbjct: 300 SSVVQCGRVLGSYVKKIACGGRHSAVIT-DTGALLTFGWGLYGQCGQ-GSTDDELS---- 353
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXX 285
P L I I ++A + S++G +Y +G C
Sbjct: 354 PTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPN 413
Query: 286 L----------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
L G H V+T +G V G + +G L + + P V ++
Sbjct: 414 LENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIK 466
Score = 87 (35.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 27/70 (38%), Positives = 34/70 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHI 131
A GG H LAL S + G+V+ WG G GQLG G V + P P+ + Y
Sbjct: 240 AAGGRHTLAL---SDI--GQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA-T 293
Query: 132 SAGWNHSGFV 141
S+G N S V
Sbjct: 294 SSGVNMSSVV 303
Score = 86 (35.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P VS + +A G RH+L L D +G QV+G+G G GQLG+ R+R VS P
Sbjct: 225 PCLVSLAPGVRIVSVAAGGRHTLAL-SD-IG-QVWGWGYGGEGQLGLGS-RVRLVSSP 278
Score = 63 (27.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 35 KVWSWGAGTDGQLGTG 50
+VW WG G +GQLG G
Sbjct: 254 QVWGWGYGGEGQLGLG 269
Score = 61 (26.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSP 169
I ++AG H+ +SD G ++ G G GQLG G R SSP
Sbjct: 236 IVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSP 278
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 228 (85.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 90/308 (29%), Positives = 130/308 (42%)
Query: 77 AHVLALTSPSSVI--GGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISA 133
A V A + S+ + G+V + G SS GH + ++ PK V G ++A
Sbjct: 166 AQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGT--PCKQVAA 223
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSL 191
G + + F+S G +TCG T GQLGHGD P KV F+ V QIA G + L
Sbjct: 224 GLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVP-KVVEFLKTIGPVVQIAAGPSYVL 282
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAA 249
+ +D VY FGSG LG + + P+V I I+ +SA + + A
Sbjct: 283 AVTQD---GSVYSFGSGSNFCLGHGEQQ--DELQPRVIQAFKRKGIHILRVSAGDEHAVA 337
Query: 250 LSAEGHLYTWGRGFNST---SDVNCXXXXXXXXX-----XXXXXLGWNHVLVLTGDGEVL 301
L + G +YTWG+G+ D N VL G +
Sbjct: 338 LDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLY 397
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L P+R S + L + + L +V Q++ G H+ VVT+ I +G
Sbjct: 398 GFGWMGFGSLGFPDRGVSDKVLRPRV--LECLKPHRVSQVSTGLYHTIVVTQRGRIFGFG 455
Query: 362 WGEHGQLG 369
E QLG
Sbjct: 456 DNERAQLG 463
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 65/226 (28%), Positives = 100/226 (44%)
Query: 37 WSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXX-XXXXACGGAHVLALTSPSSVIGGKVFS 95
++ G+ T GQLG G D A G ++VLA+T G V+S
Sbjct: 238 YTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQD-----GSVYS 292
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G GS+ LGHGE D L P+ + F I +SAG H+ + +G ++T G G
Sbjct: 293 FGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC 352
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LGHGD +P + + N Q+ R + VL++ G +YGFG G LG
Sbjct: 353 GALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVE---GGLLYGFGWMGFGSLGF 409
Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ L P+V L + +S + ++ G ++ +G
Sbjct: 410 PDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFG 455
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 82/308 (26%), Positives = 126/308 (40%)
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFT 149
KV+S G SG L HG E + P+ F F + +SA NHS FV SG + T
Sbjct: 130 KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQ---VAQVSATQNHSAFVLQSGQVLT 186
Query: 150 CGDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
CGD + GH D R P V + Q+A G+ ++ L ++ G+ Y GS
Sbjct: 187 CGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSRE--GH-AYTCGSN 243
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
GQLG R V P+V L I +V I+A A++ +G +Y++G G N
Sbjct: 244 THGQLGHGDTLDRPV--PKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCL 301
Query: 265 ----STSDVN---CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
++ G H + L +G V G + G L +
Sbjct: 302 GHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEN 361
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN--TCD 375
P + + NL+ +Q+ A + V+ E + +GW G LG + D
Sbjct: 362 DKITP-----QVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSD 416
Query: 376 QI-HPKVV 382
++ P+V+
Sbjct: 417 KVLRPRVL 424
Score = 181 (68.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 69/267 (25%), Positives = 108/267 (40%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRH 189
I+ G H+ +++S +++CG G L HG + F V Q++ H
Sbjct: 116 IATGKYHTLLINNSK-VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
S +L+ QV G G D R + P++ L ++A +
Sbjct: 175 SAFVLQS---GQVLTCGDNSSHCCG-HLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVF 230
Query: 250 LSAEGHLYTWGR------GFNSTSD---VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEV 300
LS EGH YT G G T D G ++VL +T DG V
Sbjct: 231 LSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSV 290
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + L E+ +P + K G+ +++++AG EH+ + N + TW
Sbjct: 291 YSFGSGSNFCLGHGEQQDELQPRVIQAFKRK---GIHILRVSAGDEHAVALDSNGRVYTW 347
Query: 361 GWGEHGQLGLGNTCDQIHPKV-VNLGD 386
G G G LG G+ D+I P+V VNL +
Sbjct: 348 GKGYCGALGHGDENDKITPQVLVNLNN 374
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/204 (27%), Positives = 93/204 (45%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXX--XXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
V+S+G+G++ LG G DE + G H +AL S G+V
Sbjct: 290 VYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDS-----NGRV 344
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG+G G LGHG+ D + P+ + + + A + + + G L+ G
Sbjct: 345 YTWGKGYCGALGHGDENDKITPQVLVNLNN--CLAVQVCARKRKTFVLVEGGLLYGFGWM 402
Query: 154 TFGQLGHGDYRSHSSPV---KVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
FG LG D R S V +V + + V Q++ G+ H++V+ + +++GFG +
Sbjct: 403 GFGSLGFPD-RGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQR---GRIFGFGDNE 458
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLH 233
R QLG D +R P I LH
Sbjct: 459 RAQLG--HDSLRGCLEP-TEIFLH 479
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 232 (86.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 79/288 (27%), Positives = 132/288 (45%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G HS + + + +CGD + GQLG + P + + V ++CG HSL
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAAL 250
+ C +V+ +G+G GQLG+ + + +S P+ + L+DI+I+ +S S AL
Sbjct: 89 AV---CHKGRVFAWGAGSEGQLGIGE--FKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL 143
Query: 251 SAEGHLYTWGR--------GFNSTSDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVL 301
S + +++WG+ G S + G H L+ G
Sbjct: 144 SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSF 203
Query: 302 MLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
G + G L+ R V S +PLSV K NL V+ I+ G H+AV+T++ +
Sbjct: 204 GWGSNSAGQLALSGRNVPVQSNKPLSVGALK--NLG---VVYISCGDAHTAVLTQDGKVF 258
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
T+G GQLG T ++ P++V + +Q++ CGS T A
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---ERIDGLVSQID--CGSYHTLA 301
Score = 230 (86.0 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 71/229 (31%), Positives = 109/229 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V S G + GQLG +CG H LA+ G+VF
Sbjct: 43 RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHK-----GRVF 97
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GS GQLG GE + + PK + + + I +S G HS +S +F+ G
Sbjct: 98 AWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK--IIQVSCGHYHSLALSKDSQVFSWGKN 155
Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G ++ S +SP +V S + Q+A G HS L C G +G+GS GQ
Sbjct: 156 SHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL-C-GTS-FGWGSNSAGQ 212
Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
L +S + S +++G L ++ +V IS +A L+ +G ++T+G
Sbjct: 213 LALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFG 261
Score = 186 (70.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 55/176 (31%), Positives = 76/176 (43%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+SWG + GQLG G+ + A GGAH AL+ + G
Sbjct: 148 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LCGTS 202
Query: 94 FSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG S+GQL G V KP++ + +IS G H+ ++ G +FT GD
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGD 262
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
GQLG+ P V ++ V QI CG H+L + QV FG G
Sbjct: 263 NRSGQLGYSPTPEKRGPQLVER-IDGLVSQIDCGSYHTLAYVHTT--GQVVSFGHG 315
Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 61/238 (25%), Positives = 99/238 (41%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
Q A G RHSL+LL + ++V G RGQLG + + LP+ L + + +S
Sbjct: 27 QAASGERHSLLLLTN---HRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 ANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCXXXXXXXXXXXXXXLGWNHVL 292
+ S A+ +G ++ WG G F S G H L
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSL 141
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
L+ D +V G + HG L + P + ++V +L+G+ + Q+AAG HS ++
Sbjct: 142 ALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 353 ENRAIMTWGWGEHGQLGL-GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WG GQL L G K +++G +N + + CG T +++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG-ALKNLGV-VYISCGDAHTAVLTQ 253
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 223 (83.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 91/318 (28%), Positives = 133/318 (41%)
Query: 113 LYPKPVTF-FDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSH 166
L P PV D + T + +S G HS ++D +F+ G+ ++GQ G + S
Sbjct: 159 LEPSPVPLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSE 218
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S V + V Q+ACG HSL L +VY G G GQ G+ I S P
Sbjct: 219 SHRVHRMQDFDGQVVQVACGQDHSLFLTDQ---GEVYSCGWGADGQTGLGHYNITST--P 273
Query: 227 QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD---VN---CXXXX 275
G L + +V ++ GD A+SA+G L+ WG S +D VN C
Sbjct: 274 TKLGGDLAGVNVVQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFS 333
Query: 276 XXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRPLSV--ALEKVSN 332
G VL G+G V + G +G+L P + + P + L +S
Sbjct: 334 GVGQVKQAA-CGGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSE 389
Query: 333 LD-GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+ GV+V +I G H A +T + WG G LG+G DQ P V + E
Sbjct: 390 FNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE---- 445
Query: 392 DTQLEVFCGSGFTYAISR 409
++V CG ++R
Sbjct: 446 --PMDVACGVDHMVTLAR 461
Score = 197 (74.4 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX------------XXXXXXXACGGAH 78
+ + KVW G D QLG R + +CG AH
Sbjct: 126 KDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAH 185
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISA 133
L LT G VFS G S GQ G + + +Y + + FDG + ++
Sbjct: 186 SLVLTD-----GEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ---VVQVAC 237
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLV 192
G +HS F++D G +++CG G GQ G G Y S+P K+ NV Q+A L
Sbjct: 238 GQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDCCLA 297
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALS 251
+ D G ++G+G+ + QL D + V++P+ + + ++ + G A L+
Sbjct: 298 VSAD--GG-LFGWGNSEYLQLASVTDSTQ-VNVPRC-LPFSGVGQVKQAACGGTGCAVLN 352
Query: 252 AEGHLYTWGRG 262
EGH++ WG G
Sbjct: 353 GEGHVFVWGYG 363
Score = 40 (19.1 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 92 KVFSWGRGSSGQLG 105
++F WG SG LG
Sbjct: 60 RIFVWGFSFSGALG 73
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 233 (87.1 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 87/293 (29%), Positives = 132/293 (45%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIA 184
I IS G HS F++D G L+T GDG G+LGHG+ S+SSP V F K V IA
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV-SLPQV---TIGLHDIEIVGI 240
G +HSL L C +VY +G QLG+ S SLPQ+ I ++
Sbjct: 250 NGGKHSLALTI-C--GKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEV 300
+ + + + + +G + NS+S+ N G N V+T G +
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNN-------KIKIVKLSCGTNRSAVITDKGLL 359
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G HG L E+ + + + V +L G +I +++G HS V+T + ++
Sbjct: 360 FTFGRGDHGRLGLGEQ---SLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSF 416
Query: 361 GWGEHGQLGLGNTCDQ-IHPKVVNLGDEFQNRDTQ----LEVFCGSGFTYAIS 408
G + GQLG+G +Q PK + Q + Q ++V G + AIS
Sbjct: 417 GRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAIS 469
Score = 184 (69.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 57/195 (29%), Positives = 99/195 (50%)
Query: 83 TSPSSVIGGK--VFSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHS 138
T+ S+VI K +F++GRG G+LG GE ++ PK V GH I +S+G HS
Sbjct: 347 TNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGH--FIIDMSSGGGHS 404
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNK--------NVHQIACGMRH 189
+++ G +F+ G GQLG G + + + P ++ F N+ +++ G H
Sbjct: 405 LVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYH 464
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV----TIGLHDIEIVGISANGD 245
S+ + D N Y +G G LG S D +LP + ++ + +++ + +S+
Sbjct: 465 SIAI-SD--NNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQ 521
Query: 246 RSAALSAEGHLYTWG 260
+ A+S +G LY+WG
Sbjct: 522 HNVAMSIDGSLYSWG 536
Score = 174 (66.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 80/335 (23%), Positives = 137/335 (40%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYTITHISAGWNHSGFVSDSGCLFT 149
G ++++G G G+LGHG + PK V FF + I+ G HS ++ G +++
Sbjct: 207 GNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYS 266
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G QLG G+ S SS + +N N+ ++ + N G
Sbjct: 267 WGGNDSCQLGLGN-GSSSSYYSLPQLINFNISYNNNNNNNN----NNSTNNNNNNNNDGA 321
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
+ Q +S++ S S + I+IV +S +RSA ++ +G L+T+GRG + +
Sbjct: 322 QQQFSLSQN---SSS------NNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL 372
Query: 270 NCXXXXXXXXXXXXXXL----------GWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
L G H LVLT G V G + G L
Sbjct: 373 GEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQ 432
Query: 319 STRPLSVALEKVSNLDG---VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC- 374
T P + + S + +I+++AG HS +++N WG ++G LG
Sbjct: 433 QTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQ 492
Query: 375 -DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D+ P ++N + ++V SGF + ++
Sbjct: 493 GDRNLPVLINSNSVVVDNVKFIDV--SSGFQHNVA 525
Score = 147 (56.8 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 63/243 (25%), Positives = 102/243 (41%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXX---XXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
++++G G G+LG G L A GG H LALT I GK
Sbjct: 209 LYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALT-----ICGK 263
Query: 93 VFSWGRGSSGQLGHGEMVDALY---PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
V+SWG S QLG G + Y P+ + F +IS N++ ++S
Sbjct: 264 VYSWGGNDSCQLGLGNGSSSSYYSLPQLINF---------NISYNNNNNNNNNNST---- 310
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ G + S SS NK + +++CG S V+ L ++ FG G
Sbjct: 311 --NNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGL---LFTFGRG 365
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
G+LG+ + + S P++ L I+ +S+ G S L+ +G ++++GR
Sbjct: 366 DHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Query: 269 VNC 271
+ C
Sbjct: 426 IGC 428
Score = 103 (41.3 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 29/125 (23%), Positives = 61/125 (48%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL-DGVKVIQIAAGA 345
G H + ++ + + G S +G+L V R L V + S + D VK I +++G
Sbjct: 461 GGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGF 520
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF-CGSGFT 404
+H+ ++ + ++ +WG +LG + +Q+ PK + ++D++ +F CG T
Sbjct: 521 QHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFIN----SKDSKPLLFTCGEIIT 576
Query: 405 YAISR 409
+ +
Sbjct: 577 IIVEK 581
Score = 48 (22.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 35 KVWSWGAGTDGQLGTG 50
KV+SWG QLG G
Sbjct: 263 KVYSWGGNDSCQLGLG 278
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 226 (84.6 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 69/229 (30%), Positives = 107/229 (46%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ACG H +AL + G+VF
Sbjct: 125 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-----GEVF 179
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + I+ G S V D+G ++ G
Sbjct: 180 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HIKRVVSIACGQTSSMAVLDNGEVYGWGYNG 238
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ + V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 239 NGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 295
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
++ L I + +V I+A + SAA + GH+Y WG+
Sbjct: 296 TGN---KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 341
Score = 211 (79.3 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 72/281 (25%), Positives = 117/281 (41%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 71 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWG 129
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +P++V ++ + K V ++ACG HS+ L D +V+ +G
Sbjct: 130 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD---GEVFAWGYNNC 186
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +VT LH +V I+ S A+ G +Y WG G
Sbjct: 187 GQVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 245
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N G+ H L LT +G + G + +G L + + P
Sbjct: 246 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 305
Query: 323 LSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ +EK +V++IAA A SA T+ + WG
Sbjct: 306 AHIMVEKE------RVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G HVL T G V++WG QLG+G + P V + + ++ G
Sbjct: 113 GPHVLLSTED-----GVVYAWGHNGYSQLGNGTTNQGIAPIQVCT-NLLIKQVVEVACGS 166
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
+HS ++ G +F G GQ+G G + +P KV++ ++ K V IACG S+ +L
Sbjct: 167 HHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVL 226
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+ +VYG+G GQLG+ + + P LH + + I + AL+ EG
Sbjct: 227 DN---GEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQIVCGYAHTLALTDEG 281
Query: 255 HLYTWG 260
LY WG
Sbjct: 282 LLYAWG 287
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 66/258 (25%), Positives = 108/258 (41%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLL 194
N + +V+D+ +F G LG GD +S P K+ + K + ++ G H L+
Sbjct: 61 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 120
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + VY +G QLG + ++ QV L ++V ++ S AL+A+G
Sbjct: 121 EDGV---VYAWGHNGYSQLGNGTTN-QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 176
Query: 255 HLYTWGR------GFNSTSD-------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
++ WG G ST++ NC G + + +GEV
Sbjct: 177 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIA----CGQTSSMAVLDNGEVY 232
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + +G L + P+ VA L V V QI G H+ +T+ + WG
Sbjct: 233 GWGYNGNGQLGLGNNGNQLTPVRVAA-----LHSVCVNQIVCGYAHTLALTDEGLLYAWG 287
Query: 362 WGEHGQLGLGNTCDQIHP 379
+GQLG GN + + P
Sbjct: 288 ANTYGQLGTGNKNNLLSP 305
Score = 165 (63.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 50/179 (27%), Positives = 76/179 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ ACG +A+ G+V
Sbjct: 177 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLD-----NGEV 231
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIVCGYAHTLALTDEGLLYAWGAN 289
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG G+ + SP + + V AC H+ G VY +G RGQ
Sbjct: 290 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ--GGHVYMWGQC-RGQ 345
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 59/221 (26%), Positives = 93/221 (42%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ L +I +S LS E G +Y
Sbjct: 70 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 127
Query: 259 WGR-GF----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHG 309
WG G+ N T++ + G +H + L DGEV G ++ G
Sbjct: 128 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 187
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N +K V+ IA G S V +N + WG+ +GQL
Sbjct: 188 QVGSGSTANQPTP-----RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQL 242
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 243 GLGNNGNQLTPVRVAALHSVCVN-----QIVCGYAHTLALT 278
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 205 (77.2 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 64/232 (27%), Positives = 105/232 (45%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
Q+ G H+L+L D G QV+ +G G+ GQLG + + P++ L + + ++
Sbjct: 162 QLELGAEHALLL--DAAG-QVFSWGGGRHGQLG--HGTLEAELEPRLLEALQGLVMAEVA 216
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDG-EV 300
A G S +S G +Y WG +N + + L DG +V
Sbjct: 217 AGGWHSVCVSETGDIYIWG--WNESGQLALPTRNLAEDGETVA----REATELNEDGSQV 270
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
GG+ G P + +P L+ D VK + G+ H+AVVT + TW
Sbjct: 271 KRTGGAEDGA---PAPFIAVQPFPALLDLPMGSDAVKA---SCGSRHTAVVTRTGELYTW 324
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 409
GWG++GQLG +T P+ V + F ++ Q++ V CG + + YA+ +
Sbjct: 325 GWGKYGQLGHEDTTSLDRPRRV---EYFVDKQLQVKAVTCGPWNTYVYAVEK 373
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L + G+VFSWG G GQLGHG + L P+ + G + ++AG
Sbjct: 166 GAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQG--LVMAEVAAG 218
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS VS++G ++ G GQL
Sbjct: 219 GWHSVCVSETGDIYIWGWNESGQL 242
Score = 104 (41.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K V + CG
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 362
Score = 92 (37.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L E A GG H + ++ G ++
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET-----GDIY 232
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 233 IWGWNESGQL 242
Score = 55 (24.4 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 91 GKVFSWGRGSSGQ-LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G F +G GQ LG G P P+ G I +SA W+++ FV+ G L
Sbjct: 7 GAWFGFGFCGFGQELGSGRGRQVHSPSPLRA--G--VDICRVSASWSYTAFVTRGGRLEL 62
Query: 150 CGDGTFGQLG 159
G + G G
Sbjct: 63 SGSAS-GAAG 71
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 225 (84.3 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 69/229 (30%), Positives = 107/229 (46%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ACG H +AL + G+VF
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-----GEVF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + I+ G S V D+G ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HIKRVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ + V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
++ L I + +V I+A + SAA + GH+Y WG+
Sbjct: 267 TGN---KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 217 (81.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 74/281 (26%), Positives = 118/281 (41%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSG-PHVLLSTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +PV+V ++ + K V ++ACG HS+ L D +V+ +G
Sbjct: 101 HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD---GEVFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +VT LH +VGI+ S A+ G +Y WG G
Sbjct: 158 GQVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ +EK +V++IAA A SA T+ + WG
Sbjct: 277 AHIMVEKE------RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G HVL T G V++WG QLG+G + P V + + ++ G
Sbjct: 84 GPHVLLSTED-----GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGS 137
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
+HS ++ G +F G GQ+G G + +P KV++ ++ K V IACG S+ +L
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVL 197
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+ +VYG+G GQLG+ + + P LH + + I + AL+ EG
Sbjct: 198 DN---GEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQIVCGYAHTLALTDEG 252
Query: 255 HLYTWG 260
LY WG
Sbjct: 253 LLYAWG 258
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 65/254 (25%), Positives = 105/254 (41%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLLKDCL 198
+V+D+ +F G LG GD +S P K+ K + ++ G H L+ +D +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGV 95
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
VY +G QLG + ++ QV L ++V ++ S AL+A+G ++
Sbjct: 96 ---VYAWGHNGYSQLGNGTTN-QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 259 WGR------GFNSTSD-------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
WG G ST++ NC G + + +GEV G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIA----CGQTSSMAVLDNGEVYGWGY 207
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ +G L + P+ VA L V V QI G H+ +T+ + WG +
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAA-----LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262
Query: 366 GQLGLGNTCDQIHP 379
GQLG GN + + P
Sbjct: 263 GQLGTGNKNNLLSP 276
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 50/179 (27%), Positives = 76/179 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ ACG +A+ G+V
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD-----NGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG G+ + SP + + V AC H+ G VY +G RGQ
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ--GGHVYMWGQC-RGQ 316
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 60/221 (27%), Positives = 94/221 (42%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ GL +I +S LS E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 259 WGR-GF----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHG 309
WG G+ N T++ + G +H + L DGEV G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N +K V+ IA G S V +N + WG+ +GQL
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHSVCVN-----QIVCGYAHTLALT 249
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 225 (84.3 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 69/229 (30%), Positives = 107/229 (46%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ACG H +AL + G+VF
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-----GEVF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + I+ G S V D+G ++ G
Sbjct: 151 AWGYNNCGQVGSGSTTNQPTPRKVTNCL-HIKRVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ + V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
++ L I + +V I+A + SAA + GH+Y WG+
Sbjct: 267 TGN---KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 217 (81.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 73/281 (25%), Positives = 118/281 (41%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +P++V ++ + K V ++ACG HS+ L D +V+ +G
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD---GEVFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +VT LH +VGI+ S A+ G +Y WG G
Sbjct: 158 GQVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ +EK +V++IAA A SA T+ + WG
Sbjct: 277 AHIMVEKE------RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/186 (30%), Positives = 87/186 (46%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G HVL T G V++WG QLG+G + P V + + ++ G
Sbjct: 84 GPHVLLSTED-----GVVYAWGHNGYSQLGNGTTNQGIAPIQVCT-NLLIKQVVEVACGS 137
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
+HS ++ G +F G GQ+G G + +P KV++ ++ K V IACG S+ +L
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVL 197
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+ +VYG+G GQLG+ + + P LH + + I + AL+ EG
Sbjct: 198 DN---GEVYGWGYNGNGQLGLGNNGNQLT--PVRVAALHSVCVNQIVCGYAHTLALTDEG 252
Query: 255 HLYTWG 260
LY WG
Sbjct: 253 LLYAWG 258
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 66/258 (25%), Positives = 108/258 (41%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLL 194
N + +V+D+ +F G LG GD +S P K+ + K + ++ G H L+
Sbjct: 32 NEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + VY +G QLG + ++ QV L ++V ++ S AL+A+G
Sbjct: 92 EDGV---VYAWGHNGYSQLGNGTTN-QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 255 HLYTWGR------GFNSTSD-------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
++ WG G ST++ NC G + + +GEV
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIA----CGQTSSMAVLDNGEVY 203
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + +G L + P+ VA L V V QI G H+ +T+ + WG
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRVAA-----LHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 362 WGEHGQLGLGNTCDQIHP 379
+GQLG GN + + P
Sbjct: 259 ANTYGQLGTGNKNNLLSP 276
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 50/179 (27%), Positives = 76/179 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ ACG +A+ G+V
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD-----NGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG G+ + SP + + V AC H+ G VY +G RGQ
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ--GGHVYMWGQC-RGQ 316
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 59/221 (26%), Positives = 93/221 (42%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ L +I +S LS E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 259 WGR-GF----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHG 309
WG G+ N T++ + G +H + L DGEV G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N +K V+ IA G S V +N + WG+ +GQL
Sbjct: 159 QVGSGSTTNQPTP-----RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHSVCVN-----QIVCGYAHTLALT 249
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 229 (85.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 90/318 (28%), Positives = 135/318 (42%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHIS 132
CG H + LT GK++S G GQLG G + + PV++ + I IS
Sbjct: 48 CGEQHTVFLTKD-----GKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAK--IIQIS 100
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
AG +H+ V+D G +F G GQLG + +P +V +N ++ Q+A G H +
Sbjct: 101 AGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQE-IN-DIVQVASGSNHCI 158
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L + G +V+ +G G R + P+ L + IV + A ALS
Sbjct: 159 ALDE---GGRVFVWGEQADG---------RCIHRPEPVEQLSGVPIVRVLAGARHCLALS 206
Query: 252 AEGHLYTWGR---GFNSTSDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLML 303
A G ++TWG+ G D+ + G NH ++LT G
Sbjct: 207 ASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSF 266
Query: 304 GGSHHGMLSDPERVSS-TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G ++V T P +V S+L G V +IAAGA H+ + + A +G
Sbjct: 267 GSDALGQCGFGKKVEKRTNPTAV-----SDLIGSHVTRIAAGACHTIAICKG-APYPFGL 320
Query: 363 GEHGQLGLGNTCDQIHPK 380
GQLG G Q P+
Sbjct: 321 NSSGQLGNGKIMTQSTPR 338
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 61/259 (23%), Positives = 115/259 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACG 186
+T ++ G H+ F++ G +++ G GQLG G S + S+ + + QI+ G
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H++ + D +V+ +GS + GQLG+ + + P+ ++DI V +++ +
Sbjct: 103 RSHTVSVTDD---GRVFAWGSNEHGQLGM-ESKFTWQGTPRRVQEINDI--VQVASGSNH 156
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL-GWNHVLVLTGDGEVLMLGG 305
AL G ++ WG + L G H L L+ G V G
Sbjct: 157 CIALDEGGRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQ 216
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
++ G L + RP +++ V +DG+ V++ A G H+ ++T ++G
Sbjct: 217 NNSGELG----IDDLRP-QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDAL 271
Query: 366 GQLGLGNTCDQ-IHPKVVN 383
GQ G G ++ +P V+
Sbjct: 272 GQCGFGKKVEKRTNPTAVS 290
Score = 184 (69.8 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 67/235 (28%), Positives = 96/235 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG+ GQLG A G H +AL GG+VF
Sbjct: 114 RVFAWGSNEHGQLGMESKFT-WQGTPRRVQEINDIVQVASGSNHCIALDE-----GGRVF 167
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG + G+ H P+PV G I + AG H +S SG +FT G
Sbjct: 168 VWGEQADGRCIHR-------PEPVEQLSG--VPIVRVLAGARHCLALSASGAVFTWGQNN 218
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LG D R +S V V + ACG H+ VLL C + + FGS GQ G
Sbjct: 219 SGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHT-VLLTHC--GRTFSFGSDALGQCG 275
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
K ++ + P L + I+A + A+ +G Y +G NS+ +
Sbjct: 276 FGK-KVEKRTNPTAVSDLIGSHVTRIAAGACHTIAI-CKGAPYPFG--LNSSGQL 326
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 68/277 (24%), Positives = 108/277 (38%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKN----VHQIACGMRHSLVLLKDCLGNQ 201
L CG GQLG S P ++ N V + CG +H++ L KD +
Sbjct: 5 LLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKD---GK 61
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ GS GQLG S S+ V+ +I+ ISA + +++ +G ++ WG
Sbjct: 62 MWSVGSNMDGQLGRGSRTEGSFSIYPVS-WTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 262 GFNSTSDVNCXXXXXXX-------XXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ + G NH + L G V + G G
Sbjct: 121 NEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH- 179
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
RP E V L GV ++++ AGA H ++ + A+ TWG G+LG+ +
Sbjct: 180 ------RP-----EPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLR 228
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHC 411
Q + V+ D +E CG T ++ HC
Sbjct: 229 PQTSVQHVHQMDGLG----VVEAACGDNHTVLLT-HC 260
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 40/137 (29%), Positives = 60/137 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V++WG G+LG L + ACG H + LT G+ FS
Sbjct: 211 VFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHC-----GRTFS 265
Query: 96 WGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G + GQ G G+ V+ P V+ G +T I+AG H+ + G + G +
Sbjct: 266 FGSDALGQCGFGKKVEKRTNPTAVSDLIGSH--VTRIAAGACHTIAIC-KGAPYPFGLNS 322
Query: 155 FGQLGHGDYRSHSSPVK 171
GQLG+G + S+P K
Sbjct: 323 SGQLGNGKIMTQSTPRK 339
Score = 122 (48.0 bits), Expect = 0.00047, P = 0.00047
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
K+WS G+ DGQLG G R + G +H +++T G+V
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDD-----GRV 115
Query: 94 FSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GQLG + P+ V + I +++G NH + + G +F G+
Sbjct: 116 FAWGSNEHGQLGMESKFTWQGTPRRVQEIND----IVQVASGSNHCIALDEGGRVFVWGE 171
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G+ H PV+ S V + ++ G RH L L
Sbjct: 172 QADGRCIH-----RPEPVEQLSGVP--IVRVLAGARHCLAL 205
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 229 (85.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 90/318 (28%), Positives = 135/318 (42%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHIS 132
CG H + LT GK++S G GQLG G + + PV++ + I IS
Sbjct: 48 CGEQHTVFLTKD-----GKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAK--IIQIS 100
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
AG +H+ V+D G +F G GQLG + +P +V +N ++ Q+A G H +
Sbjct: 101 AGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQE-IN-DIVQVASGSNHCI 158
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L + G +V+ +G G R + P+ L + IV + A ALS
Sbjct: 159 ALDE---GGRVFVWGEQADG---------RCIHRPEPVEQLSGVPIVRVLAGARHCLALS 206
Query: 252 AEGHLYTWGR---GFNSTSDVNCXXXXXXXXXXXXXXL-----GWNHVLVLTGDGEVLML 303
A G ++TWG+ G D+ + G NH ++LT G
Sbjct: 207 ASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSF 266
Query: 304 GGSHHGMLSDPERVSS-TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G ++V T P +V S+L G V +IAAGA H+ + + A +G
Sbjct: 267 GSDALGQCGFGKKVEKRTNPTAV-----SDLIGSHVTRIAAGACHTIAICKG-APYPFGL 320
Query: 363 GEHGQLGLGNTCDQIHPK 380
GQLG G Q P+
Sbjct: 321 NSSGQLGNGKIMTQSTPR 338
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 61/259 (23%), Positives = 115/259 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACG 186
+T ++ G H+ F++ G +++ G GQLG G S + S+ + + QI+ G
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H++ + D +V+ +GS + GQLG+ + + P+ ++DI V +++ +
Sbjct: 103 RSHTVSVTDD---GRVFAWGSNEHGQLGM-ESKFTWQGTPRRVQEINDI--VQVASGSNH 156
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL-GWNHVLVLTGDGEVLMLGG 305
AL G ++ WG + L G H L L+ G V G
Sbjct: 157 CIALDEGGRVFVWGEQADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQ 216
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
++ G L + RP +++ V +DG+ V++ A G H+ ++T ++G
Sbjct: 217 NNSGELG----IDDLRP-QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDAL 271
Query: 366 GQLGLGNTCDQ-IHPKVVN 383
GQ G G ++ +P V+
Sbjct: 272 GQCGFGKKVEKRTNPTAVS 290
Score = 184 (69.8 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 67/235 (28%), Positives = 96/235 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG+ GQLG A G H +AL GG+VF
Sbjct: 114 RVFAWGSNEHGQLGMESKFT-WQGTPRRVQEINDIVQVASGSNHCIALDE-----GGRVF 167
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG + G+ H P+PV G I + AG H +S SG +FT G
Sbjct: 168 VWGEQADGRCIHR-------PEPVEQLSG--VPIVRVLAGARHCLALSASGAVFTWGQNN 218
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LG D R +S V V + ACG H+ VLL C + + FGS GQ G
Sbjct: 219 SGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHT-VLLTHC--GRTFSFGSDALGQCG 275
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
K ++ + P L + I+A + A+ +G Y +G NS+ +
Sbjct: 276 FGK-KVEKRTNPTAVSDLIGSHVTRIAAGACHTIAI-CKGAPYPFG--LNSSGQL 326
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 68/277 (24%), Positives = 108/277 (38%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKN----VHQIACGMRHSLVLLKDCLGNQ 201
L CG GQLG S P ++ N V + CG +H++ L KD +
Sbjct: 5 LLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKD---GK 61
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ GS GQLG S S+ V+ +I+ ISA + +++ +G ++ WG
Sbjct: 62 MWSVGSNMDGQLGRGSRTEGSFSIYPVS-WTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 262 GFNSTSDVNCXXXXXXX-------XXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ + G NH + L G V + G G
Sbjct: 121 NEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQADGRCIH- 179
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
RP E V L GV ++++ AGA H ++ + A+ TWG G+LG+ +
Sbjct: 180 ------RP-----EPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLR 228
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHC 411
Q + V+ D +E CG T ++ HC
Sbjct: 229 PQTSVQHVHQMDGLG----VVEAACGDNHTVLLT-HC 260
Score = 130 (50.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 40/137 (29%), Positives = 60/137 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V++WG G+LG L + ACG H + LT G+ FS
Sbjct: 211 VFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHC-----GRTFS 265
Query: 96 WGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G + GQ G G+ V+ P V+ G +T I+AG H+ + G + G +
Sbjct: 266 FGSDALGQCGFGKKVEKRTNPTAVSDLIGSH--VTRIAAGACHTIAIC-KGAPYPFGLNS 322
Query: 155 FGQLGHGDYRSHSSPVK 171
GQLG+G + S+P K
Sbjct: 323 SGQLGNGKIMTQSTPRK 339
Score = 122 (48.0 bits), Expect = 0.00047, P = 0.00047
Identities = 43/161 (26%), Positives = 67/161 (41%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
K+WS G+ DGQLG G R + G +H +++T G+V
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDD-----GRV 115
Query: 94 FSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GQLG + P+ V + I +++G NH + + G +F G+
Sbjct: 116 FAWGSNEHGQLGMESKFTWQGTPRRVQEIND----IVQVASGSNHCIALDEGGRVFVWGE 171
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G+ H PV+ S V + ++ G RH L L
Sbjct: 172 QADGRCIH-----RPEPVEQLSGVP--IVRVLAGARHCLAL 205
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 196 (74.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G D ACG +HVLA+++ +VF+
Sbjct: 418 IMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNER-----EVFA 472
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG +G+LG G + P+ V H + G + S ++ + + CG
Sbjct: 473 WGRGDNGRLGLGTLECHNSPQQVAVPPEHE--AQRVICGIDSSMVLTVNNQILACGSNRC 530
Query: 156 GQLGHGDYRSHSSP-----VKVSSFVN------KNVHQIAC---GMRHSLVLLKDCLGNQ 201
+LG S P V+ ++ N + C G HS + Q
Sbjct: 531 NKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTAS---GQ 587
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
Y FGS + GQLG + R+ +P + +GL +++ ++ + A+ A+G + TWG+
Sbjct: 588 CYTFGSNQHGQLGTNS--CRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGK 645
Query: 262 G 262
G
Sbjct: 646 G 646
Score = 185 (70.2 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 63/202 (31%), Positives = 93/202 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG LT G + ++G GS+G LGHG D PK V G Y + ++
Sbjct: 403 SCGDLFTACLTDR-----GIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLG--YEMVQVA 455
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G +H VS+ +F G G G+LG G H+SP +V+ ++ CG+ S+V
Sbjct: 456 CGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMV 515
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP----QV---TI-------GLHDIEIV 238
L + NQ+ GS + +LG+ DRI S P QV T+ L+ +V
Sbjct: 516 LT---VNNQILACGSNRCNKLGL--DRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVV 570
Query: 239 GISANGDRSAALSAEGHLYTWG 260
SAA++A G YT+G
Sbjct: 571 CADIGTAHSAAVTASGQCYTFG 592
Score = 157 (60.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDA---LYPKPVT-FFDGHR-YTITHISAGWNHSGFVSDSG 145
G++ W G G + A L P+ V+ F +G TI H+S G + ++D G
Sbjct: 357 GRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRG 416
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ T G G+ G LGHG++ S P V + + + Q+ACG H L + + +V+ +
Sbjct: 417 IIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNE---REVFAW 473
Query: 206 GSGKRGQLGV 215
G G G+LG+
Sbjct: 474 GRGDNGRLGL 483
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 51/204 (25%), Positives = 77/204 (37%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG G +G+LG G L CG + LT + ++
Sbjct: 469 EVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLT-----VNNQIL 523
Query: 95 SWGRGSSGQLGHGEMVDALYPKP------VTFFDG------HRYTITHISAGWNHSGFVS 142
+ G +LG + A P P T F ++ + G HS V+
Sbjct: 524 ACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVT 583
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
SG +T G GQLG R+ P V V +ACG ++ + D +V
Sbjct: 584 ASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGAD---GEV 640
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLP 226
+G G RG+LG KD + P
Sbjct: 641 CTWGKGARGRLG-RKDEETGMPRP 663
Score = 100 (40.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 37/142 (26%), Positives = 59/142 (41%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACG 186
+ +SAG V+ SG L G G + ++ FV++ + Q
Sbjct: 340 VVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQ-PQFVSRFLEGQSGVT 398
Query: 187 MRHSLV--LLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
++H L CL ++ + FGSG G LG VS P++ L E+V ++
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLG--HGNFTDVSQPKIVEALLGYEMVQVAC 456
Query: 243 NGDRSAALSAEGHLYTWGRGFN 264
A+S E ++ WGRG N
Sbjct: 457 GASHVLAVSNEREVFAWGRGDN 478
Score = 88 (36.0 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 24/84 (28%), Positives = 36/84 (42%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+G H +T G+ G + HG L +S R V V L +KV +A G
Sbjct: 574 IGTAHSAAVTASGQCYTFGSNQHGQLG----TNSCRNSRVP-HLVVGLRAMKVTVVACGD 628
Query: 346 EHSAVVTENRAIMTWGWGEHGQLG 369
+ + + + TWG G G+LG
Sbjct: 629 AFTVAIGADGEVCTWGKGARGRLG 652
Score = 85 (35.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEH 347
N+ ++ G LG +P +V + + L+ V+ G H
Sbjct: 519 NNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAH 578
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
SA VT + T+G +HGQLG N+C + +V +L + + V CG FT AI
Sbjct: 579 SAAVTASGQCYTFGSNQHGQLGT-NSCR--NSRVPHLVVGLRAMKVTV-VACGDAFTVAI 634
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 224 (83.9 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 68/229 (29%), Positives = 107/229 (46%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ACG H +AL + G+VF
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD-----GEVF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + I+ G S V D+G ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HIKRVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ + V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
++ L I + ++ I+A + SAA + GH+Y WG+
Sbjct: 267 TGN---KNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 217 (81.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 74/281 (26%), Positives = 118/281 (41%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSG-PHVLLSTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +P++V ++ + K V ++ACG HS+ L D +V+ +G
Sbjct: 101 HNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD---GEVFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +VT LH +VGI+ S A+ G +Y WG G
Sbjct: 158 GQVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ +EK +VI+IAA A SA T+ + WG
Sbjct: 277 AHIMVEKE------RVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 195 (73.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 65/228 (28%), Positives = 99/228 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GAHVLALTSPSSVIGGKV 93
+V+ +G LGTG H + G G HVL T G V
Sbjct: 42 EVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED-----GVV 96
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG QLG+G L P V + + ++ G +HS ++ G +F G
Sbjct: 97 YAWGHNGYSQLGNGTTNQGLAPIQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQ+G G + +P KV++ ++ K V IACG S+ +L + +VYG+G GQ
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDN---GEVYGWGYNGNGQ 212
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG+ + + P LH + + I + AL+ EG LY WG
Sbjct: 213 LGLGNNGNQLT--PVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 67/258 (25%), Positives = 107/258 (41%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLL 194
N + +V+DS +F G LG GD S P K+ + K + ++ G H L+
Sbjct: 32 NEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + VY +G QLG + ++ QV L ++V ++ S AL+A+G
Sbjct: 92 EDGV---VYAWGHNGYSQLGNGTTN-QGLAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 255 HLYTWGR------GFNSTSD-------VNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
++ WG G ST++ NC G + + +GEV
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIA----CGQTSSMAVLDNGEVY 203
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + +G L + P+ VA L V V QI G H+ +T+ + WG
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRVAA-----LHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 362 WGEHGQLGLGNTCDQIHP 379
+GQLG GN + + P
Sbjct: 259 ANTYGQLGTGNKNNLLSP 276
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 59/221 (26%), Positives = 92/221 (41%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG + S +P+ L +I +S LS E G +Y
Sbjct: 41 DEVFVFGLNYSSCLGTGDNH--STLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 259 WGR-GF----NSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGGSHHG 309
WG G+ N T++ + G +H + L DGEV G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N +K V+ IA G S V +N + WG+ +GQL
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHSVCVN-----QIVCGYAHTLALT 249
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 146 (56.5 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 39/128 (30%), Positives = 67/128 (52%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K +GR SGQLG + + L KP + I + G +H+ F++D+G ++ CG
Sbjct: 136 KALGFGRNPSGQLGLSQDIK-LAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACG 194
Query: 152 DGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ GQ G G+ ++ SP ++ + + +I CG S++L D G+ ++ FG +
Sbjct: 195 ENKSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVIL--DIKGS-LHTFGLPEY 250
Query: 211 GQLGVSKD 218
GQLG + D
Sbjct: 251 GQLGHNTD 258
Score = 144 (55.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 51/176 (28%), Positives = 81/176 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG H +A+ S +V+SWG G G+LGH E D + P+ + FFD +
Sbjct: 303 ACGNNHTVAIDSKK-----RVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVF 357
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
G S V++ G LF FGQ G+ + PV+ S N+ I C +
Sbjct: 358 CGSTFSLIVNELGLLFL-----FGQNKKTGEANMYPKPVQDLS--GWNITDIGCANTSIM 410
Query: 192 VLLKDCL----GNQVYG-FGSGK-RGQLGVSKD--RIRSVSLPQVTIGL-HDIEIV 238
+ D L + +G G G+ + V K+ ++ ++ +PQVT+G H + +V
Sbjct: 411 ISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLV 466
Score = 126 (49.4 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
V+ +DGV+++ A G H+ + + + +WG+G G+LG D++ P+++ D Q
Sbjct: 291 VTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDT-Q 349
Query: 390 NRDTQLEVFCGSGFTYAIS 408
R + VFCGS F+ ++
Sbjct: 350 GRGGR-SVFCGSTFSLIVN 367
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 47/164 (28%), Positives = 72/164 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG--GK 92
+V+SWG G G+LG DE GG V ++ S ++ G
Sbjct: 317 RVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGR-----GGRSVFCGSTFSLIVNELGL 371
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F +G+ + G M YPKPV G + IT I N S +S L G
Sbjct: 372 LFLFGQNK--KTGEANM----YPKPVQDLSG--WNITDIGCA-NTSIMISADDTLIAWGA 422
Query: 153 G-TFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLL 194
TFG+LG G+++ S+ P +V N + Q+ G H+++L+
Sbjct: 423 SPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLV 466
Score = 98 (39.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 40/138 (28%), Positives = 55/138 (39%)
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQ 182
+RY + SA H+ ++ G GQLG D + P + + N+ Q
Sbjct: 116 YRYVASGPSAA--HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQ 173
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
A G H+L L D G VY G K GQ GV S P I I+ I
Sbjct: 174 AAVGRHHTL-FLTDT-GT-VYACGENKSGQCGVGNTHANIYS-P-TPINYRGPPIIRIGC 228
Query: 243 NGDRSAALSAEGHLYTWG 260
+ S L +G L+T+G
Sbjct: 229 GAEFSVILDIKGSLHTFG 246
Score = 78 (32.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 175 FVNKNVHQIACG--MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
F + +A G H++++ D + GFG GQLG+S+D I+ P + L
Sbjct: 111 FTEEKYRYVASGPSAAHTILINMD---RKALGFGRNPSGQLGLSQD-IKLAEKPTIIPAL 166
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWG 260
+ IV + + L+ G +Y G
Sbjct: 167 EQLNIVQAAVGRHHTLFLTDTGTVYACG 194
Score = 57 (25.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/79 (26%), Positives = 27/79 (34%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V++ G GQ G G H CG + L I G + +
Sbjct: 190 VYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-----IKGSLHT 244
Query: 96 WGRGSSGQLGHGEMVDALY 114
+G GQLGH DA Y
Sbjct: 245 FGLPEYGQLGHN--TDAKY 261
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 223 (83.6 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 78/263 (29%), Positives = 117/263 (44%)
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG HS V+ G ++T G GQLGHG + V S + Q A G +++
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D +VY G G+ + V+ PQ+ L +I +V + +A LS
Sbjct: 210 ISDD---GKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSR 266
Query: 253 EGHLYT--WGR----GFNS-TSDVNCXXXXXXXXXXXXXXL--GWNHVLVLT--GDG-EV 300
EG +YT WG G + +DV + G+ ++L L +G V
Sbjct: 267 EGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSV 326
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+G G L R P + ++ NL +V+ AAGA H+AVV ++ + TW
Sbjct: 327 YSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQP-RVV--AAGAWHAAVVGQDGRVCTW 383
Query: 361 GWGEHGQLGLGNT-CDQIHPKVV 382
GWG +G LG GN C+ + PKVV
Sbjct: 384 GWGRYGCLGHGNEECESV-PKVV 405
Score = 206 (77.6 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 85/311 (27%), Positives = 136/311 (43%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +A+TS G+V+++G +SGQLGHG D +PV G R I +AG
Sbjct: 151 GPGHSVAVTSK-----GEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVR--IIQAAAG 203
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLV 192
+ +SD G ++ CG +FG+ +G + ++P V+S N V Q A G + V
Sbjct: 204 AARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAV 263
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALS 251
L ++ +VY F G G+LG + V P+ +G L ++ +V I+A AL+
Sbjct: 264 LSRE---GKVYTFSWGNDGRLG-HQTEAADVE-PRPLLGPLENVPVVQIAAGYCYLLALA 318
Query: 252 AEGH---LYTWGRGFN------STSDVN----CXXXXXXXXXXXXXXLGWNHVLVLTGDG 298
+ + +Y+ G G S +D G H V+ DG
Sbjct: 319 CQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDG 378
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V G +G L + P + V L VK + +A G + VV+++ +
Sbjct: 379 RVCTWGWGRYGCLGHGNEECESVP-----KVVEGLSHVKAVHVATGDYTTFVVSDDGDVY 433
Query: 359 TWGWGEHGQLG 369
++G GE LG
Sbjct: 434 SFGCGESASLG 444
Score = 182 (69.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 74/243 (30%), Positives = 104/243 (42%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
KV+++ G DG+LG D A G ++LAL + G V
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPN--GMSV 326
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+S G G G+LGHG D YP+ + F ++AG H+ V G + T G G
Sbjct: 327 YSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWG 386
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+G LGHG+ S P V + K VH +A G + V+ D G+ VY FG G+
Sbjct: 387 RYGCLGHGNEECESVPKVVEGLSHVKAVH-VATGDYTTFVVSDD--GD-VYSFGCGESAS 442
Query: 213 LG--VSKD----RIRSVSLPQVTIGLHDIE--IVGISANGD-----RSAALSAEGHLYTW 259
LG S D R +V P V L + +V IS + AL+ G L+ +
Sbjct: 443 LGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAF 502
Query: 260 GRG 262
G G
Sbjct: 503 GAG 505
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 56/198 (28%), Positives = 85/198 (42%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXX--XXACGGAHVLALTSPSSVIG- 90
+ V+S G G G+LG G DE A G H ++V+G
Sbjct: 324 MSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWH-------AAVVGQ 376
Query: 91 -GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV-SDSGCLF 148
G+V +WG G G LGHG PK V H + H++ G +++ FV SD G ++
Sbjct: 377 DGRVCTWGWGRYGCLGHGNEECESVPKVVEGLS-HVKAV-HVATG-DYTTFVVSDDGDVY 433
Query: 149 TCGDGTFGQLGHG---DYRS--HS---SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG- 199
+ G G LGH D + H+ SP V+S N + + +S+
Sbjct: 434 SFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFAL 493
Query: 200 ---NQVYGFGSGKRGQLG 214
+++ FG+G +GQLG
Sbjct: 494 TESGKLFAFGAGDQGQLG 511
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 69/231 (29%), Positives = 113/231 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-EXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+S G + GQLG + +CG H +A+ G+V
Sbjct: 48 RVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQ-----GRV 102
Query: 94 FSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GS GQLG GE + + P + G + I +S G HS +S+ G +F+ G
Sbjct: 103 FTWGAGSEGQLGIGESKEISFMPTKINSLAGIK--IIQVSCGHYHSLALSEDGQVFSWGS 160
Query: 153 GTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG G+ S +SP KV S + Q+A G HS L +G +G+G+ + G
Sbjct: 161 NRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFAL--SLMGTS-FGWGNNRSG 217
Query: 212 QLGVSKDRIRSVSLPQV-TIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QL +S + ++ + + +IG L + +V IS + ++ L+ +G ++T+G
Sbjct: 218 QLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 268
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 69/286 (24%), Positives = 125/286 (43%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACGMRHS 190
++G HS + + +++CGD + GQLG +S P + + + ++ ++CG HS
Sbjct: 34 ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHS 93
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ + C +V+ +G+G GQLG+ + + S +P L I+I+ +S S AL
Sbjct: 94 VAV---CHQGRVFTWGAGSEGQLGIGESKEISF-MPTKINSLAGIKIIQVSCGHYHSLAL 149
Query: 251 SAEGHLYTWGR--------GFNSTSDVNCXXXXXXXXX-XXXXXLGWNHVLVLTGDGEVL 301
S +G +++WG G N S + G H L+ G
Sbjct: 150 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSF 209
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L+ + + + L + V+ I+ G EH++V+TE+ + T+G
Sbjct: 210 GWGNNRSGQLALSGNSAKAEQIYKP-HSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 268
Query: 362 WGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
QL + P+++ +G +Q+E CGS T A
Sbjct: 269 GSSSEQLQHSPRSGRGGPQLIEGIGGHV----SQIE--CGSYHTIA 308
Score = 184 (69.8 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 60/223 (26%), Positives = 98/223 (43%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P ++ + + + A G RHSL+L + ++VY G RGQLG + S P+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSN---HRVYSCGDNSRGQLGQKSPQ--STKRPEE 73
Query: 229 TI-GLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVN---CXXXXXXX 278
I L + I +S + S A+ +G ++TWG G + +++
Sbjct: 74 PIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAG 133
Query: 279 XXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
G H L L+ DG+V G + G L + S + +KV +L+G+ +
Sbjct: 134 IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCS----QASPQKVKSLEGIPL 189
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL-GNTC--DQIH 378
Q+AAG HS ++ WG GQL L GN+ +QI+
Sbjct: 190 AQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIY 232
Score = 177 (67.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 65/237 (27%), Positives = 95/237 (40%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V+SWG+ GQLG G L + A GG H AL+ + G
Sbjct: 154 QVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS-----LMGTS 208
Query: 94 FSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
F WG SGQL G+ + +Y KP + + +IS G+ H+ +++ G +FT
Sbjct: 209 FGWGNNRSGQLALSGNSAKAEQIY-KPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTF 267
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G + QL H P + + +V QI CG H++ + QV G R
Sbjct: 268 GGSSSEQLQHSPRSGRGGPQLIEG-IGGHVSQIECGSYHTIAYVYTT--GQVVSLG---R 321
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
G S + + VT L ++V I D A A + T R STS
Sbjct: 322 GPSCTSNATHQEAACSDVTCLLSAKDLVDIEVK-DIFAG--AHANFVTTCRHTRSTS 375
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 222 (83.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 71/243 (29%), Positives = 107/243 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L D ACG +HVLAL++ G++F+
Sbjct: 418 IMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTD-----GELFA 472
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G + CG F
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPVAPGQE--AQRVVCGIDSSMILTSPGRVLACGSNRF 530
Query: 156 GQLGHGDYRSHSSPV------KVSSFV---NKNVHQ--IAC---GMRHSLVLLK--DCLG 199
+LG PV + SF + + Q + C G HS + DC
Sbjct: 531 NKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDC-- 588
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Y FGS + GQLG S R+ P GL I++V ++ + A+ AEG +Y+W
Sbjct: 589 ---YTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSW 643
Query: 260 GRG 262
G+G
Sbjct: 644 GKG 646
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 82/319 (25%), Positives = 134/319 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDAL-YPKP--VT-FFDGHR-YTITHISAGWNHSGFVSDSG 145
G++ W G G + A+ P+P V+ F +G TI H++ G + ++D G
Sbjct: 357 GRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRG 416
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ T G G+ G LGHG+ S P V + + + Q+ACG H L L D +++ +
Sbjct: 417 IIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTD---GELFAW 473
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G G G+LG+ S + PQ E + D S L++ G + G FN
Sbjct: 474 GRGDGGRLGLGTRE--SHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFN 531
Query: 265 STS-DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM---LGGSHHGMLSDP------ 314
D L + + D E L+ LG +H ++
Sbjct: 532 KLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTF 591
Query: 315 ------ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ +S+R +S A +V L+G+K++ +A G + V + +WG G G+L
Sbjct: 592 GSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRL 651
Query: 369 GLGNTCDQIHPKVVNLGDE 387
G + D P+ V L DE
Sbjct: 652 GRRDE-DAGLPRPVQL-DE 668
Score = 155 (59.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 76/302 (25%), Positives = 116/302 (38%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACG 186
+ ++AG V+ SG L G G G + + FV++ + Q
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 187 MRHSLV--LLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
++H L CL ++ + FGSG G LG + +S P + L E+V ++
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLG--HGNLTDISQPTIVEALLGYEMVQVAC 456
Query: 243 NGDRSAALSAEGHLYTWGRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVL 294
ALS +G L+ WGRG + NC + G + ++L
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMIL 516
Query: 295 TGDGEVLMLGGSHHGMLS------DPERVSSTR---PLSVALEKVSNLDGVKVIQIAAGA 345
T G VL G + L D E V + LS + LD ++ + G
Sbjct: 517 TSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGT 576
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HSA +T + T+G +HGQLG + P V G E + V CG FT
Sbjct: 577 AHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQ-GLEGIK---MVMVACGDAFTV 632
Query: 406 AI 407
A+
Sbjct: 633 AV 634
Score = 145 (56.1 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITH 130
A G +T +I + G G G L G V+ P+ V+ F +G TI H
Sbjct: 344 AAGRTQKAGVTRSGRLILWEAPPLGAGG-GTLLPGA-VELPQPQFVSRFLEGQSGVTIKH 401
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++ G + ++D G + T G G+ G LGHG+ S P V + + + Q+ACG H
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHV 461
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGV 215
L L D +++ +G G G+LG+
Sbjct: 462 LALSTD---GELFAWGRGDGGRLGL 483
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 49/214 (22%), Positives = 84/214 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
++++WG G G+LG G CG + LTSP V+ G
Sbjct: 469 ELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSN 528
Query: 93 VFS-WGRG----SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
F+ G + + ++ +AL P+ + + + G HS ++ SG
Sbjct: 529 RFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDC 588
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG R +P +V + +ACG ++ + + +VY +G
Sbjct: 589 YTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAE---GEVYSWGK 645
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
G RG+LG +D + P H + +S
Sbjct: 646 GTRGRLG-RRDEDAGLPRPVQLDETHPYMVTSVS 678
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 217 (81.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 83/292 (28%), Positives = 122/292 (41%)
Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSHSSPV 170
P P+ + +S G HS ++D +F+ G+ ++GQ G + S S V
Sbjct: 169 PVPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKV 228
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+ V Q+ACG HSL L +VY G G GQ G+ I S P
Sbjct: 229 HRMQDFDGQVVQVACGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITSA--PTKLG 283
Query: 231 G-LHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD---VN---CXXXXXXXX 279
G L + +V ++ GD A+SA+G L+ WG S +D VN C
Sbjct: 284 GDLAGVNVVQVATYGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQ 343
Query: 280 XXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRPLSV--ALEKVSNLDG- 335
G VL G+G V + G +G+L P V + P + L ++ L+
Sbjct: 344 VKQAA-CGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPE 399
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
V+V +I G H A +T+ + WG G LG+G DQ P V + E
Sbjct: 400 VRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 451
Score = 199 (75.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 70/251 (27%), Positives = 109/251 (43%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX------------XXXXXXXACGGAH 78
+ V KVW G D QLG R + +CG AH
Sbjct: 132 RDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAH 191
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISA 133
L LT G VFS G S GQ G + + +Y + + FDG + ++
Sbjct: 192 SLVLTD-----GEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQ---VVQVAC 243
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLV 192
G +HS F++D G +++CG G GQ G G Y S+P K+ NV Q+A L
Sbjct: 244 GQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCCLA 303
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALS 251
+ D G+ ++G+G+ + QL D + V++P+ + + ++ + G A L+
Sbjct: 304 VSAD--GS-LFGWGNSEYLQLASVTDSTQ-VNVPRC-LPFSGVGQVKQAACGGTGCAVLN 358
Query: 252 AEGHLYTWGRG 262
EGH++ WG G
Sbjct: 359 GEGHVFVWGYG 369
Score = 40 (19.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 92 KVFSWGRGSSGQLG 105
++F WG SG LG
Sbjct: 66 RIFVWGFSFSGALG 79
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 202 (76.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 70/199 (35%), Positives = 97/199 (48%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHIS 132
CG H L LT+ G ++S G + QLG G M AL P VT DG IT +
Sbjct: 1180 CGRQHTLILTN-----NG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDG--MNITMLE 1231
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG H+ V+D G L+ G G +GQLG G + ++P VS F K + QI+ G H+LV
Sbjct: 1232 AGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLV 1290
Query: 193 LL---------KDCLGNQVYGFGSGKRGQLGV-SKDR-IRSVSLPQVTIGLHDIEIVGIS 241
L C GN+++ FGS GQLG + D +LP V + + D + I
Sbjct: 1291 LCGAPNSHMEANHC-GNELFVFGSNHFGQLGTGNSDHGDTKTNLP-VRLEVGDCSLRLIH 1348
Query: 242 ANGDRSAALSAEGHLYTWG 260
+ A+ + L+TWG
Sbjct: 1349 TKFFTNLAVDEQDRLFTWG 1367
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK--VSNLDGVKVIQIAAG 344
G H L+LT +G + LG ++ L R + +AL+ V+ LDG+ + + AG
Sbjct: 1181 GRQHTLILTNNG-LYSLGNNNLCQLG------IGRHMQMALQPMLVTALDGMNITMLEAG 1233
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGD-----EFQNRDTQLEVF 398
H+A V + + M WGWG +GQLG G+ C+ I P++V+ + V
Sbjct: 1234 QYHNAAVADGKLYM-WGWGIYGQLGQGS-CENIATPQLVSFFKFKKILQISLGHAHTLVL 1291
Query: 399 CGSGFTYAISRHC 411
CG+ ++ + HC
Sbjct: 1292 CGAPNSHMEANHC 1304
Score = 75 (31.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
T L+ L S + G +++QI++G H +++ + + TWG QLG T D+
Sbjct: 1486 TEHLTPHLVDTSEVAG-RILQISSGLFHFCLISSSCTLYTWGKNLEHQLG---TEDKDRR 1541
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
V+ + + + V CGS FT ++
Sbjct: 1542 AVLK-PSPIDSIERPMYVDCGSDFTLVMT 1569
Score = 63 (27.2 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 326 ALEKVSNLDGV-KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG--LGNTCDQIHPKVV 382
A+ K S +D + + + + G++ + V+T + + +G +GQ G LG + +++ +VV
Sbjct: 1542 AVLKPSPIDSIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVERMRQRVV 1601
Query: 383 NL 384
L
Sbjct: 1602 CL 1603
Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 20/81 (24%), Positives = 30/81 (37%)
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFN---STSDVNCXXXXXXXXXXXXXX-----LGW 288
I+ IS+ +S+ LYTWG+ T D + G
Sbjct: 1503 ILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMYVDCGS 1562
Query: 289 NHVLVLTGDGEVLMLGGSHHG 309
+ LV+T D V GG+ +G
Sbjct: 1563 DFTLVMTTDHVVRAFGGNSNG 1583
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 209 (78.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 80/290 (27%), Positives = 121/290 (41%)
Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSHSSPV 170
P P+ + + +S G HS ++DS +FT G+ ++GQ G + S S +
Sbjct: 154 PIPLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLI 213
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+ + V Q+ CG HSL K V+ G G GQ G+ I SV P
Sbjct: 214 HQLNDFDSRVVQVVCGQDHSLFRTKK---GAVFACGWGADGQTGLGHYNITSV--PTKLG 268
Query: 231 G-LHDIEIVGISANGDRSAALSAEGHLYTWGRG-------FNSTSDVNCXXXX-XXXXXX 281
G + + IV +S+ GD A+S EG L+ WG T+ VN
Sbjct: 269 GDIAGVNIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKI 328
Query: 282 XXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR-PLSV--ALEKVSNLDG-VK 337
G +VLT +G V + G +G+L ++ T P + +L S+ V+
Sbjct: 329 KEAACGGTGNIVLTEEGAVFVWG---YGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVR 385
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
V ++ G H A +T + WG G LG+G DQ P V + E
Sbjct: 386 VARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTIPGE 435
Score = 160 (61.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 61/245 (24%), Positives = 97/245 (39%)
Query: 33 VVKVWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXX-----------XXXXXXACGGAHVL 80
+ KVW G D QLG R + D +CG AH L
Sbjct: 119 ITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKTRVLQVSCGRAHSL 178
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHS 138
LT V F+ G S GQ G + D +Y + + + + + G +HS
Sbjct: 179 VLTDSEGV-----FTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQVVCGQDHS 233
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDC 197
F + G +F CG G GQ G G Y S P K+ + N+ Q++ + + D
Sbjct: 234 LFRTKKGAVFACGWGADGQTGLGHYNITSVPTKLGGDIAGVNIVQVS-SYGDCCLAVSD- 291
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
++G+G+ + QL S V++P+ + +I + G + L+ EG ++
Sbjct: 292 -EGDLFGWGNSEYLQLA-SVTETTQVNVPR-HLPFKIGKIKEAACGGTGNIVLTEEGAVF 348
Query: 258 TWGRG 262
WG G
Sbjct: 349 VWGYG 353
Score = 48 (22.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 92 KVFSWGRGSSGQLGHGEMV--DALYPKP 117
+VF WG SG LG V DA + KP
Sbjct: 57 RVFVWGFSYSGALGVPSFVKPDAGWKKP 84
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 215 (80.7 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 88/296 (29%), Positives = 124/296 (41%)
Query: 113 LYPKPVTF-FDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG--DYRSHSS 168
L P PV D + T + +S G HS ++D +F+ G+ +GQ G + +S
Sbjct: 160 LEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSE 219
Query: 169 PVKVSSF--VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
KV+ + V Q+ CG HSL L +VY G G GQ G+ I SV P
Sbjct: 220 SHKVNRMQDFDGQVVQVVCGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYDITSV--P 274
Query: 227 QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD---VN---CXXXX 275
G L + +V ++ GD A+SAEG L+ WG S +D VN C
Sbjct: 275 TKLGGDLAGVNVVQVATYGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFS 334
Query: 276 XXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRP--LSVALEKVSN 332
G VL G+G V + G +G+L P V + P + L ++
Sbjct: 335 GVGKVKQAA-CGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETAFPEVIPPTLFGLTE 390
Query: 333 LD-GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ GV V I G H A +T + WG G LG+G DQ P V + E
Sbjct: 391 FNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 446
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 68/251 (27%), Positives = 106/251 (42%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX------------XXXXXXXACGGAH 78
+ V KVW G D QLG R H + +CG AH
Sbjct: 127 KDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAH 186
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISA 133
L LT V FS G + GQ G + + +Y + + FDG + +
Sbjct: 187 SLILTDCEGV-----FSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQ---VVQVVC 238
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLV 192
G +HS F++D G +++CG G GQ G G Y S P K+ NV Q+A L
Sbjct: 239 GQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCCLA 298
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALS 251
+ + G ++G+G+ + QL D + V++P+ + + ++ + G A L+
Sbjct: 299 VSAE--GG-LFGWGNSEYLQLASVTDSTQ-VNVPRC-LPFSGVGKVKQAACGGTGCAVLN 353
Query: 252 AEGHLYTWGRG 262
EGH++ WG G
Sbjct: 354 GEGHVFVWGYG 364
Score = 41 (19.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 92 KVFSWGRGSSGQLG 105
+VF WG SG LG
Sbjct: 61 RVFVWGFSFSGALG 74
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 214 (80.4 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 84/295 (28%), Positives = 126/295 (42%)
Query: 113 LYPKPVTF-FDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSH 166
L P PV+ D + T + +S G HS ++D +F+ G+ ++GQ G + S
Sbjct: 159 LEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSE 218
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S V + V Q+ACG HSL L +VY G G GQ G+ I S S
Sbjct: 219 SHRVHRMQDFDGQVVQVACGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITS-SPT 274
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD---VN---CXXXXX 276
++ L + ++ ++ GD A+SA+G L+ WG S +D VN C
Sbjct: 275 KLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSG 334
Query: 277 XXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRPLSV--ALEKVSNL 333
G VL G+G V + G +G+L P V S P + L ++
Sbjct: 335 VGKVRQAA-CGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEF 390
Query: 334 DG-VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ ++V +I G H A +T + WG G LG+G DQ P V + E
Sbjct: 391 NPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 445
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 73/249 (29%), Positives = 106/249 (42%)
Query: 33 VVKVWSWGAGTDGQLGTGR------------LHDEXXXXXXXXXXXXXXXXXACGGAHVL 80
V KVW G D QLG R L +CG AH L
Sbjct: 128 VTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSL 187
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISAGW 135
LT V FS G S GQ G + + +Y + + FDG + ++ G
Sbjct: 188 VLTDREGV-----FSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ---VVQVACGQ 239
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLL 194
+HS F++D G +++CG G GQ G G Y SSP K+ NV Q+A L +
Sbjct: 240 DHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVS 299
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGDRSAALSAE 253
D G ++G+G+ + QL D + V++P+ + + V +A G A L+ E
Sbjct: 300 AD--GG-LFGWGNSEYLQLASVTDSTQ-VNVPRC-LHFSGVGKVRQAACGGTGCAVLNGE 354
Query: 254 GHLYTWGRG 262
GH++ WG G
Sbjct: 355 GHVFVWGYG 363
Score = 41 (19.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 92 KVFSWGRGSSGQLG 105
+VF WG SG LG
Sbjct: 60 RVFVWGFSFSGALG 73
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 69/283 (24%), Positives = 126/283 (44%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K+FS G +GQLG +VD+ P PV ++ + I AG N S ++++G L+ G
Sbjct: 94 KIFSMGFNQTGQLGIENVVDSAVPLPVDTLS--KFNVIKIKAGNNVSAAITEAGDLYCWG 151
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG--MRHSLVLLKDCLGNQVYGFGSGK 209
+GQLG+G + ++ +N + + +L C G Q +
Sbjct: 152 SSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQ-HTIAIST 210
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
G + S S Q+ +G + ++V + + D S A GH+ + G T+D
Sbjct: 211 TGAI-FSWG---SNQYGQLGLGHCNAKLVPVPIHLDNSFERRA-GHINSLGEIV--TTDF 263
Query: 270 NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
G H +LT +G++ + G + +G L + + + P +V
Sbjct: 264 TAKTIHRIVVDIA---CGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVK--- 317
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+L+ VK+ ++A G H+ ++T+ + + T+G E QLG G+
Sbjct: 318 -GSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGS 359
Score = 169 (64.5 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG+G +G H +D YP P + + +S G NHS + ++ CL
Sbjct: 4 LYTWGKGKTGNTCHN--IDKKYPSPPSVLIS--LNLDQLSMGPNHSAAIVNNECLM---- 55
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+G++ G R H++ K+ + V ++CG H+L+L + +++ G + GQ
Sbjct: 56 --WGEV-MG--RKHTTLFKI--VWKRRVVSVSCGFNHTLLLTSEY---KIFSMGFNQTGQ 105
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG+ +V LP T L ++ I A + SAA++ G LY WG
Sbjct: 106 LGIENVVDSAVPLPVDT--LSKFNVIKIKAGNNVSAAITEAGDLYCWG 151
Score = 155 (59.6 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H L LTS K+FS G +GQLG +VD+ P PV ++ + I
Sbjct: 80 SCGFNHTLLLTSEY-----KIFSMGFNQTGQLGIENVVDSAVPLPVDTLS--KFNVIKIK 132
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--HS-SPVKVSS------------FVN 177
AG N S ++++G L+ G +GQLG+G + HS +P + + + N
Sbjct: 133 AGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQN 192
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
I G +H++ + G ++ +GS + GQLG+ + V +P
Sbjct: 193 LQYTNICFGAQHTIAI--STTG-AIFSWGSNQYGQLGLGHCNAKLVPVP 238
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/177 (27%), Positives = 72/177 (40%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+Y +G GK G + D+ + S P V I L+ + +S + SAA+ WG
Sbjct: 4 LYTWGKGKTGNTCHNIDK-KYPSPPSVLISLN---LDQLSMGPNHSAAI-VNNECLMWGE 58
Query: 262 GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
G+NH L+LT + ++ +G + G L V S
Sbjct: 59 VMGRKHTT--LFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAV 116
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
PL V L VI+I AG SA +TE + WG +GQLG G ++H
Sbjct: 117 PLPV-----DTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLH 168
Score = 122 (48.0 bits), Expect = 0.00091, P = 0.00091
Identities = 32/89 (35%), Positives = 42/89 (47%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG H LT + G +F WG GQLG G+ +D PK V I ++
Sbjct: 276 ACGNFHSALLT-----LEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKG-SLEFVKINRMA 329
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
G NH+ ++ +FT G F QLGHG
Sbjct: 330 LGNNHTILLTKEQDVFTFGSNEFYQLGHG 358
Score = 109 (43.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 43/163 (26%), Positives = 65/163 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
K++S G GQLG + D G A+T G ++
Sbjct: 94 KIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE-----AGDLY 148
Query: 95 SWGRGSSGQLGHGEMVDALYP-KPVTFF-----DGHR----YT---ITHISAGWNHSGFV 141
WG + GQLG+G+M L+ P T D + Y T+I G H+ +
Sbjct: 149 CWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAI 208
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV---SSFVNKNVH 181
S +G +F+ G +GQLG G + PV + +SF + H
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGH 251
Score = 107 (42.7 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 30/115 (26%), Positives = 57/115 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPE---RVSSTRPLSVA------LEKVSNL-DGV 336
G N +T G++ G S +G L + + ++ S P ++ EK + +
Sbjct: 134 GNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNL 193
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+ I GA+H+ ++ AI +WG ++GQLGLG+ ++ P ++L + F+ R
Sbjct: 194 QYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERR 248
Score = 102 (41.0 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
V+ IA G HSA++T + WG ++GQLG G++ DQ PK V EF
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEF 322
Score = 100 (40.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 34/143 (23%), Positives = 63/143 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ +S G+NH+ ++ +F+ G GQLG + + P+ V + NV +I G
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGN 135
Query: 188 RHSLVLLK--D--CLGNQVYG-FGSGK-RGQL-GVSKDRIRSVSLPQVTIG---LHDIEI 237
S + + D C G+ YG G+GK +L + I + +P +++
Sbjct: 136 NVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQY 195
Query: 238 VGISANGDRSAALSAEGHLYTWG 260
I + A+S G +++WG
Sbjct: 196 TNICFGAQHTIAISTTGAIFSWG 218
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 74 CGGA-HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
C GA H +A+++ G +FSWG GQLG G L P P+ + HI+
Sbjct: 199 CFGAQHTIAISTT-----GAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHIN 253
Query: 133 A 133
+
Sbjct: 254 S 254
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 215 (80.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 68/241 (28%), Positives = 102/241 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L D ACG +HVLAL++ G++F+
Sbjct: 418 IMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSAD-----GELFA 472
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G + CG F
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPMVPGQE--AQRVVCGIDCSMILTSPGRVLACGSNRF 530
Query: 156 GQLGHGDYRSHSSPV------KVSSFVNKNV-----HQIAC---GMRHSLVLLKDCLGNQ 201
+LG PV + SF + C G HS +
Sbjct: 531 NKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTAS---GA 587
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
Y FGS + GQLG S R+ P GL I++V ++ + A+ AEG +Y+WG+
Sbjct: 588 CYTFGSNQHGQLGTSSRRVSRA--PCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGK 645
Query: 262 G 262
G
Sbjct: 646 G 646
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 80/302 (26%), Positives = 120/302 (39%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACG 186
+ ++AG V+ SG L G G G + + FV++ + Q
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGT-GGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 187 MRHSLV--LLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
++H L CL ++ + FGSG G LG + +S P + L E+V ++
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS--LTDISQPTIVEALLGYEMVQVAC 456
Query: 243 NGDRSAALSAEGHLYTWGRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVL 294
ALSA+G L+ WGRG + NC + G + ++L
Sbjct: 457 GASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMIL 516
Query: 295 TGDGEVLMLGGSHH---GM--LSDPERVSSTRPLSVALEKV----SNLDGVKVIQIAAGA 345
T G VL G + G+ LS E + + AL + LD ++ + G
Sbjct: 517 TSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGT 576
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HSA VT + A T+G +HGQLG + P V G E + V CG FT
Sbjct: 577 AHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQ-GLEGIK---MVMVACGDAFTV 632
Query: 406 AI 407
AI
Sbjct: 633 AI 634
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 53/214 (24%), Positives = 85/214 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
++++WG G G+LG G CG + LTSP V+ G
Sbjct: 469 ELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSN 528
Query: 93 VFS-WGRG----SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
F+ G + H ++ +AL P+ R T+ + G HS V+ SG
Sbjct: 529 RFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGAC 588
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG R +P +V + +ACG ++ + + +VY +G
Sbjct: 589 YTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAE---GEVYSWGK 645
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
G RG+LG +D + P H + +S
Sbjct: 646 GARGRLG-RRDEDAGLPRPVQLDETHPYTVTSVS 678
Score = 151 (58.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 52/187 (27%), Positives = 84/187 (44%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDAL-YPKP--VT-FFDGHR-YTITHISAGWNHSGFVSDSG 145
G++ W G G + A+ P+P V+ F +G TI H++ G + ++D G
Sbjct: 357 GRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRG 416
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ T G G+ G LGHG S P V + + + Q+ACG H L L D +++ +
Sbjct: 417 IIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSAD---GELFAW 473
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G G G+LG+ S + PQ + E + D S L++ G + G FN
Sbjct: 474 GRGDGGRLGLGTRE--SHNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFN 531
Query: 265 STSDVNC 271
++C
Sbjct: 532 KLG-LDC 537
Score = 116 (45.9 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 36/119 (30%), Positives = 55/119 (46%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG H +T G G + HG L +S+R +S A +V L+G+K++ +A G
Sbjct: 574 LGTAHSAAVTASGACYTFGSNQHGQLG-----TSSRRVSRAPCRVQGLEGIKMVMVACGD 628
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
+ + + +WG G G+LG + D P+ V L DE + T V C G T
Sbjct: 629 AFTVAIGAEGEVYSWGKGARGRLGRRDE-DAGLPRPVQL-DE-THPYTVTSVSCCHGNT 684
Score = 45 (20.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+S+P + + + + E+V ++A + A ++ G L W
Sbjct: 327 LSIP-LRLPMPNTEVVQVAAGRTQKAGVTRSGRLILW 362
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 215 (80.7 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 73/281 (25%), Positives = 120/281 (42%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ G S LG G+ + PK + G + +G H V++ G L+ G
Sbjct: 42 EVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSG-PHVLLVTEDGELYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G SP+ VS+ + K V +++CG HSL L + +V+ +G
Sbjct: 101 HNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHE---GEVFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ+G S + +V+ L + IV I+ S A++ G +Y WG G
Sbjct: 158 GQVG-SGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLG 216
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N C G+ H L LT +G + G + +G L + + P
Sbjct: 217 NNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSP 276
Query: 323 LSVALEKVSNLDGVKVIQIAA-GAEH-SAVVTENRAIMTWG 361
+ V EK ++++IAA + H SA T++ + WG
Sbjct: 277 VQVMTEKE------RIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/187 (32%), Positives = 93/187 (49%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAG 134
G HVL +T G++++WG QLG+G + P V T G R +T +S G
Sbjct: 84 GPHVLLVTED-----GELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKR--VTEVSCG 136
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVL 193
+HS ++ G +F G GQ+G G + +P KVS+ + NK + IACG S+ +
Sbjct: 137 SHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAV 196
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ +VYG+G GQLG+ + + P I L ++ I++ S AL+ E
Sbjct: 197 TDN---GEVYGWGYNGNGQLGLGNNGNQLT--PCRLIALQGFCVLQIASGYAHSLALTDE 251
Query: 254 GHLYTWG 260
G LY WG
Sbjct: 252 GLLYAWG 258
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 68/230 (29%), Positives = 106/230 (46%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXX-XXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
++++WG QLG G + +CG H LALT G+V
Sbjct: 95 ELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHE-----GEV 149
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG + GQ+G G + P+ V+ ++ I +I+ G S V+D+G ++ G
Sbjct: 150 FAWGYNNCGQVGSGSTANQPTPRKVSNCLQNK-VIVNIACGQTSSMAVTDNGEVYGWGYN 208
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G+ + +P ++ + V QIA G HSL L + L +Y +G+ GQL
Sbjct: 209 GNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGL---LYAWGANTYGQL 265
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
G +S L V + IV I+A + SAA + G +Y WG+
Sbjct: 266 GTGN---KSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 55/179 (30%), Positives = 85/179 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ ACG +A+T G+V
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTD-----NGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P + G + + I++G+ HS ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRLIALQG--FCVLQIASGYAHSLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG G+ + SPV+V + + V AC H+ K G QVY +G RGQ
Sbjct: 261 TYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSAA-KTQSG-QVYMWGQC-RGQ 316
Score = 182 (69.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 65/259 (25%), Positives = 108/259 (41%)
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSL 191
A N + +++ ++ G LG GD +S +P K+ K + ++ G H L
Sbjct: 29 ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVL 88
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
++ +D ++Y +G QLG + VS V+ L + +S S AL+
Sbjct: 89 LVTED---GELYAWGHNGYSQLGNGTTN-QGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144
Query: 252 AEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLV-----------LTGDGEV 300
EG ++ WG +N+ V N V+V +T +GEV
Sbjct: 145 HEGEVFAWG--YNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEV 202
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + +G L + P ++ L G V+QIA+G HS +T+ + W
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPC-----RLIALQGFCVLQIASGYAHSLALTDEGLLYAW 257
Query: 361 GWGEHGQLGLGNTCDQIHP 379
G +GQLG GN +Q+ P
Sbjct: 258 GANTYGQLGTGNKSNQLSP 276
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 34/119 (28%), Positives = 63/119 (52%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
HVL++T DGE+ G + + L + P+ V+ +NL G +V +++ G+ HS
Sbjct: 86 HVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVS----TNLQGKRVTEVSCGSHHSL 141
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+T + WG+ GQ+G G+T +Q P+ V+ + QN+ + + CG + A++
Sbjct: 142 ALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVS--NCLQNK-VIVNIACGQTSSMAVT 197
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 54/162 (33%), Positives = 75/162 (46%)
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
PS G VF WG ++GQLG + D P V + + +IS G H+ ++ S
Sbjct: 18 PSQPAEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKS 75
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G +FT G G+ GQLGH +P +V + V QIACG +H+L + +Y
Sbjct: 76 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYA 133
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
FG G +GQLG +V P G +SA DR
Sbjct: 134 FGCGAKGQLGTG--HTCNVKCPSPVKGYWAAHSGQLSARADR 173
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 49/140 (35%), Positives = 61/140 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D +CG H LT GG VF+
Sbjct: 26 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS----GG-VFT 80
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 138
Query: 155 FGQLGHGDYRSHSSPVKVSS 174
GQLG G H+ VK S
Sbjct: 139 KGQLGTG----HTCNVKCPS 154
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG+ GQLG ++DE ACG H LA PSS G +++
Sbjct: 78 VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV-PSS---GLIYA 133
Query: 96 WGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G G+ GQLG G + P PV ++ H ++ + + + V +F+ GD T
Sbjct: 134 FGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH-IVKQ---IFSGGDQT 189
Query: 155 F 155
F
Sbjct: 190 F 190
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 42/140 (30%), Positives = 53/140 (37%)
Query: 252 AEGHLYTWGR------GFNSTSDVN--CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLML 303
AEG ++ WG G + D C G H VLT G V
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 81
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGW 362
G G L P +V L G +V QIA G +H+ A V + I +G
Sbjct: 82 GAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 136
Query: 363 GEHGQLGLGNTCDQIHPKVV 382
G GQLG G+TC+ P V
Sbjct: 137 GAKGQLGTGHTCNVKCPSPV 156
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 230 (86.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 90/362 (24%), Positives = 144/362 (39%)
Query: 36 VWSWGAGTDGQLGTGRL--HDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+WSWG G+LG G + A GG H LAL + G +
Sbjct: 156 LWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD-----GTL 210
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG +GQLG G + P P G T ISAG HS + G L++ G
Sbjct: 211 WAWGANLTGQLGTGGT--GILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQN 268
Query: 154 TFGQLGHG---DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
FG+LG+G + ++P +V + + IA G H++ L ++ V +G+ +
Sbjct: 269 LFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRN---GTVSAWGNNAQ 323
Query: 211 GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNST 266
G +G + + S P + + + + V I+A S ++ A G ++ WG G
Sbjct: 324 GAVG--DGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN 381
Query: 267 SDVNCXXXXXXXXXXXXXXLGWN----HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
LG L L +G + GG+ G L D +T P
Sbjct: 382 GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGD----GTTTP 437
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ + V + A G HS V + + WG GQLG+G+T P+ +
Sbjct: 438 SAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQI 495
Query: 383 NL 384
+
Sbjct: 496 TV 497
Score = 222 (83.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 96/365 (26%), Positives = 146/365 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+ G+ GQLG G A G H L + + G +++
Sbjct: 53 LWAAGSNQFGQLGDGT----GINRTSPVQVPGTWKTVAAGTTHSLGIKAD-----GSLWA 103
Query: 96 WGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG GQLG +G++ + P+ G+ + +SAG S + G L++ G
Sbjct: 104 WGSNLFGQLGQPLVNGQLATNKF-SPIRIGTGNDWVA--VSAGELTSFGLKGDGTLWSWG 160
Query: 152 DGTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ FG+LG G S PV+V + N +A G H+L L D G ++ +G+
Sbjct: 161 NNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD--GT-LWAWGANL 217
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----N 264
GQLG I P + IG D + ISA S AL A+G L++WG+ N
Sbjct: 218 TGQLGTGGTGILPNPTP-LKIGT-DRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGN 275
Query: 265 STS----DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ +V G H + L +G V G + G + D + +
Sbjct: 276 GVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRS 335
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + V+ + V + IAAG S V N + WG GQLG G P
Sbjct: 336 TPTLI----VAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPT 391
Query: 381 VVNLG 385
V++ G
Sbjct: 392 VLSAG 396
Score = 184 (69.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 87/350 (24%), Positives = 142/350 (40%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSS--GQLGHGEMVDALYPKPVTFFDGHRYTITH 130
A GG HVL L S ++ W GS+ GQLG G ++ P V G T
Sbjct: 38 AAGGNHVLTLRSDGTL-------WAAGSNQFGQLGDGTGINRTSPVQVP---G---TWKT 84
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLG----HGDYRSHS-SPVKVSSFVNKNVHQIAC 185
++AG HS + G L+ G FGQLG +G ++ SP+++ + N V ++
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTG-NDWV-AVSA 142
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G S L D ++ +G+ G+LG R + V L + V ++A G+
Sbjct: 143 GELTSFGLKGD---GTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDV-NCXXXXXXXXXX-XXXXLGWNHVLVLTGD 297
+ AL A+G L+ WG G T + N G H + L D
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKAD 259
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G + G L + + + +V G + IAAGA H+ + N +
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGANVTTPT--RVGT--GSDWVAIAAGALHTVALHRNGTV 315
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
WG G +G G ++ P ++ N + + G+G ++++
Sbjct: 316 SAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN---VAIAAGTGVSFSV 362
Score = 181 (68.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 70/258 (27%), Positives = 108/258 (41%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ H++AG NH + G L+ G FGQLG G + +SPV+V K V A G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG-TWKTV---AAGT 89
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
HSL + D G+ ++ +GS GQLG + ++ + + IG + + V +SA
Sbjct: 90 THSLGIKAD--GS-LWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGN-DWVAVSAGEL 145
Query: 246 RSAALSAEGHLYTWGRG-FNSTSD---------VNCXXXXXXXXXXXXXXLGWNHVLVLT 295
S L +G L++WG F D V G H L L
Sbjct: 146 TSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQ 205
Query: 296 GDGEVLMLGGSHHGMLSDPER--VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
DG + G + G L + + PL + ++ D I+AG HS +
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDR----DWTA---ISAGEMHSVALKA 258
Query: 354 NRAIMTWGWGEHGQLGLG 371
+ ++ +WG G+LG G
Sbjct: 259 DGSLWSWGQNLFGELGNG 276
Score = 175 (66.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 96/377 (25%), Positives = 135/377 (35%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG G GGA L L S G +++
Sbjct: 368 VFGWGGNGAGQLGNGTF-GAVTAPTVLSAGASAWLGVEPGGAFSLGLRS-----NGTLWA 421
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYTITHI--SAGWNHSGFVSDSGCLFTCGD 152
WG +SGQLG G + P PV G+ R T T S G + G
Sbjct: 422 WGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG---DNSS 478
Query: 153 GTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKD----CLGNQVYG-F 205
G G +G S + V++ + +A G HSL L D G+ +G
Sbjct: 479 GQLG-IGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQL 537
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
G G G S +R V + G D V ++A G S AL A+G ++TWG
Sbjct: 538 GDGT----GTS-NRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 261 --------------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
R + V G +H L L DG + G +
Sbjct: 593 QLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGAN 652
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L + ++ P+ V N +GV + +AAG HS + + WG G
Sbjct: 653 SVGQLGNGVTTATFTPVQVI-----NAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSG 707
Query: 367 QLGLG---NTCDQIHPK 380
QLG G D ++P+
Sbjct: 708 QLGTGPHPGDADPLNPQ 724
Score = 167 (63.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 88/358 (24%), Positives = 133/358 (37%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+WG+ GQLG ++ + A LTS G ++S
Sbjct: 101 LWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAG--ELTSFGLKGDGTLWS 158
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTF--FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG G+LG G V P V RY ++AG H+ + G L+ G
Sbjct: 159 WGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVA--VAAGGEHALALQADGTLWAWGAN 216
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G +P + +++ I+ G HS+ L D G+ ++ +G G+L
Sbjct: 217 LTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKAD--GS-LWSWGQNLFGEL 273
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-STSDVN 270
G V+ +V+ P +G + V I+A + AL G + WG + D
Sbjct: 274 GNGVALPGA-NVTTP-TRVGTGS-DWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 271 CXXXXXXXXXXXXXXLGWNHVLVLTG---------DGEVLMLGGSHHGMLSDPERVSSTR 321
L N+V + G +G V GG+ G L + + T
Sbjct: 331 VANRSTPTLIVAPVTLV-NNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTA 389
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P +V S GV+ G S + N + WG GQLG G T P
Sbjct: 390 P-TVLSAGASAWLGVE-----PGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP 441
Score = 140 (54.3 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 45/138 (32%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+WGA + GQLG G A G +H LA S G +++
Sbjct: 646 LWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSD-----GTLWA 700
Query: 96 WGRGSSGQLGHGEM---VDALYPKPVTFFDGHRYTITHISAG--W-------NHSGFVSD 143
WG +SGQLG G D L P+P T T +SA W +HS +
Sbjct: 701 WGNNTSGQLGTGPHPGDADPLNPQPHTV-PARILTSNPVSAADDWLVATAGGSHSAALKS 759
Query: 144 SGCLFTCGDGTFGQLGHG 161
+G L+T G T GQLG+G
Sbjct: 760 NGTLWTWGQNTSGQLGNG 777
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 59/219 (26%), Positives = 86/219 (39%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V +A G H L L D G ++ GS + GQLG I S QV G
Sbjct: 34 VPHVAAGGNHVLTLRSD--GT-LWAAGSNQFGQLGDGTG-INRTSPVQVP-GTWKT---- 84
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLG----WNHVLV-- 293
++A S + A+G L+ WG +G W V
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 294 -----LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
L GDG + G + G L D VS +P+ V + +SN G + + +AAG EH+
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN--G-RYVAVAAGGEHA 201
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ + + WG GQLG G T +P + +G +
Sbjct: 202 LALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTD 240
Score = 45 (20.9 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 20/87 (22%), Positives = 30/87 (34%)
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYT----WGRGFNSTSDVNCXXXXX 276
S+S V LH+ G + ++ +G+ Y +G ST VN
Sbjct: 1059 SISATFVPRELHEWSWQNPKPQGQAISRIATDGNGTYVAVGEFGTILTSTDSVNWTVRTF 1118
Query: 277 XXXXXXXXXLGWNHVLVLTGD-GEVLM 302
G NH V G G +L+
Sbjct: 1119 GSVNLNSVAYGGNHTFVAVGSYGRILL 1145
Score = 43 (20.2 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV---IQIAAGAEHSA 349
V G G + +G H ++S+ S T S + + +NL+GV +AAG +
Sbjct: 1221 VAYGGGRFVAVGMEGHVVISEDNGGSWTALPSDPVTRPTNLNGVAFGAGTFVAAG-DFGQ 1279
Query: 350 VVT 352
+VT
Sbjct: 1280 IVT 1282
Score = 39 (18.8 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 335 GVKVIQIAAGAEHSAVVTENRAI 357
G+ + AAGA SA+ + A+
Sbjct: 1850 GISITNSAAGANSSALFVVDTAV 1872
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 151 GDGTFGQLGHGD 162
G+GTF +G GD
Sbjct: 1410 GNGTFVAVGDGD 1421
Score = 37 (18.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKV 381
+ WG G +G G+ +HP +
Sbjct: 1407 IAWGNGTFVAVGDGDPGTTLHPPI 1430
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 230 (86.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 90/362 (24%), Positives = 144/362 (39%)
Query: 36 VWSWGAGTDGQLGTGRL--HDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+WSWG G+LG G + A GG H LAL + G +
Sbjct: 156 LWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD-----GTL 210
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG +GQLG G + P P G T ISAG HS + G L++ G
Sbjct: 211 WAWGANLTGQLGTGGT--GILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQN 268
Query: 154 TFGQLGHG---DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
FG+LG+G + ++P +V + + IA G H++ L ++ V +G+ +
Sbjct: 269 LFGELGNGVALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRN---GTVSAWGNNAQ 323
Query: 211 GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNST 266
G +G + + S P + + + + V I+A S ++ A G ++ WG G
Sbjct: 324 GAVG--DGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGN 381
Query: 267 SDVNCXXXXXXXXXXXXXXLGWN----HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
LG L L +G + GG+ G L D +T P
Sbjct: 382 GTFGAVTAPTVLSAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGD----GTTTP 437
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ + V + A G HS V + + WG GQLG+G+T P+ +
Sbjct: 438 SAIPVPVVGGAGNWRTT--ATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQI 495
Query: 383 NL 384
+
Sbjct: 496 TV 497
Score = 222 (83.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 96/365 (26%), Positives = 146/365 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+ G+ GQLG G A G H L + + G +++
Sbjct: 53 LWAAGSNQFGQLGDGT----GINRTSPVQVPGTWKTVAAGTTHSLGIKAD-----GSLWA 103
Query: 96 WGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG GQLG +G++ + P+ G+ + +SAG S + G L++ G
Sbjct: 104 WGSNLFGQLGQPLVNGQLATNKF-SPIRIGTGNDWVA--VSAGELTSFGLKGDGTLWSWG 160
Query: 152 DGTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ FG+LG G S PV+V + N +A G H+L L D G ++ +G+
Sbjct: 161 NNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD--GT-LWAWGANL 217
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----N 264
GQLG I P + IG D + ISA S AL A+G L++WG+ N
Sbjct: 218 TGQLGTGGTGILPNPTP-LKIGT-DRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGN 275
Query: 265 STS----DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ +V G H + L +G V G + G + D + +
Sbjct: 276 GVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRS 335
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + V+ + V + IAAG S V N + WG GQLG G P
Sbjct: 336 TPTLI----VAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPT 391
Query: 381 VVNLG 385
V++ G
Sbjct: 392 VLSAG 396
Score = 184 (69.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 87/350 (24%), Positives = 142/350 (40%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSS--GQLGHGEMVDALYPKPVTFFDGHRYTITH 130
A GG HVL L S ++ W GS+ GQLG G ++ P V G T
Sbjct: 38 AAGGNHVLTLRSDGTL-------WAAGSNQFGQLGDGTGINRTSPVQVP---G---TWKT 84
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLG----HGDYRSHS-SPVKVSSFVNKNVHQIAC 185
++AG HS + G L+ G FGQLG +G ++ SP+++ + N V ++
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTG-NDWV-AVSA 142
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G S L D ++ +G+ G+LG R + V L + V ++A G+
Sbjct: 143 GELTSFGLKGD---GTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDV-NCXXXXXXXXXX-XXXXLGWNHVLVLTGD 297
+ AL A+G L+ WG G T + N G H + L D
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKAD 259
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G + G L + + + +V G + IAAGA H+ + N +
Sbjct: 260 GSLWSWGQNLFGELGNGVALPGANVTTPT--RVGT--GSDWVAIAAGALHTVALHRNGTV 315
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
WG G +G G ++ P ++ N + + G+G ++++
Sbjct: 316 SAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN---VAIAAGTGVSFSV 362
Score = 181 (68.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 70/258 (27%), Positives = 108/258 (41%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ H++AG NH + G L+ G FGQLG G + +SPV+V K V A G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG-TWKTV---AAGT 89
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
HSL + D G+ ++ +GS GQLG + ++ + + IG + + V +SA
Sbjct: 90 THSLGIKAD--GS-LWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGN-DWVAVSAGEL 145
Query: 246 RSAALSAEGHLYTWGRG-FNSTSD---------VNCXXXXXXXXXXXXXXLGWNHVLVLT 295
S L +G L++WG F D V G H L L
Sbjct: 146 TSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQ 205
Query: 296 GDGEVLMLGGSHHGMLSDPER--VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
DG + G + G L + + PL + ++ D I+AG HS +
Sbjct: 206 ADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDR----DWTA---ISAGEMHSVALKA 258
Query: 354 NRAIMTWGWGEHGQLGLG 371
+ ++ +WG G+LG G
Sbjct: 259 DGSLWSWGQNLFGELGNG 276
Score = 175 (66.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 96/377 (25%), Positives = 135/377 (35%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG G GGA L L S G +++
Sbjct: 368 VFGWGGNGAGQLGNGTF-GAVTAPTVLSAGASAWLGVEPGGAFSLGLRS-----NGTLWA 421
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYTITHI--SAGWNHSGFVSDSGCLFTCGD 152
WG +SGQLG G + P PV G+ R T T S G + G
Sbjct: 422 WGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWG---DNSS 478
Query: 153 GTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKD----CLGNQVYG-F 205
G G +G S + V++ + +A G HSL L D G+ +G
Sbjct: 479 GQLG-IGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQL 537
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
G G G S +R V + G D V ++A G S AL A+G ++TWG
Sbjct: 538 GDGT----GTS-NRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 261 --------------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
R + V G +H L L DG + G +
Sbjct: 593 QLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGAN 652
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L + ++ P+ V N +GV + +AAG HS + + WG G
Sbjct: 653 SVGQLGNGVTTATFTPVQVI-----NAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSG 707
Query: 367 QLGLG---NTCDQIHPK 380
QLG G D ++P+
Sbjct: 708 QLGTGPHPGDADPLNPQ 724
Score = 167 (63.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 88/358 (24%), Positives = 133/358 (37%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+WG+ GQLG ++ + A LTS G ++S
Sbjct: 101 LWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAG--ELTSFGLKGDGTLWS 158
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTF--FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG G+LG G V P V RY ++AG H+ + G L+ G
Sbjct: 159 WGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVA--VAAGGEHALALQADGTLWAWGAN 216
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G +P + +++ I+ G HS+ L D G+ ++ +G G+L
Sbjct: 217 LTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKAD--GS-LWSWGQNLFGEL 273
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-STSDVN 270
G V+ +V+ P +G + V I+A + AL G + WG + D
Sbjct: 274 GNGVALPGA-NVTTP-TRVGTGS-DWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGT 330
Query: 271 CXXXXXXXXXXXXXXLGWNHVLVLTG---------DGEVLMLGGSHHGMLSDPERVSSTR 321
L N+V + G +G V GG+ G L + + T
Sbjct: 331 VANRSTPTLIVAPVTLV-NNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTA 389
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P +V S GV+ G S + N + WG GQLG G T P
Sbjct: 390 P-TVLSAGASAWLGVE-----PGGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP 441
Score = 140 (54.3 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 45/138 (32%), Positives = 60/138 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+W+WGA + GQLG G A G +H LA S G +++
Sbjct: 646 LWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSD-----GTLWA 700
Query: 96 WGRGSSGQLGHGEM---VDALYPKPVTFFDGHRYTITHISAG--W-------NHSGFVSD 143
WG +SGQLG G D L P+P T T +SA W +HS +
Sbjct: 701 WGNNTSGQLGTGPHPGDADPLNPQPHTV-PARILTSNPVSAADDWLVATAGGSHSAALKS 759
Query: 144 SGCLFTCGDGTFGQLGHG 161
+G L+T G T GQLG+G
Sbjct: 760 NGTLWTWGQNTSGQLGNG 777
Score = 139 (54.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 59/219 (26%), Positives = 86/219 (39%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V +A G H L L D G ++ GS + GQLG I S QV G
Sbjct: 34 VPHVAAGGNHVLTLRSD--GT-LWAAGSNQFGQLGDGTG-INRTSPVQVP-GTWKT---- 84
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLG----WNHVLV-- 293
++A S + A+G L+ WG +G W V
Sbjct: 85 VAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAGE 144
Query: 294 -----LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
L GDG + G + G L D VS +P+ V + +SN G + + +AAG EH+
Sbjct: 145 LTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSN--G-RYVAVAAGGEHA 201
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ + + WG GQLG G T +P + +G +
Sbjct: 202 LALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTD 240
Score = 45 (20.9 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 20/87 (22%), Positives = 30/87 (34%)
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYT----WGRGFNSTSDVNCXXXXX 276
S+S V LH+ G + ++ +G+ Y +G ST VN
Sbjct: 1059 SISATFVPRELHEWSWQNPKPQGQAISRIATDGNGTYVAVGEFGTILTSTDSVNWTVRTF 1118
Query: 277 XXXXXXXXXLGWNHVLVLTGD-GEVLM 302
G NH V G G +L+
Sbjct: 1119 GSVNLNSVAYGGNHTFVAVGSYGRILL 1145
Score = 43 (20.2 bits), Expect = 5.4e-05, Sum P(4) = 5.4e-05
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV---IQIAAGAEHSA 349
V G G + +G H ++S+ S T S + + +NL+GV +AAG +
Sbjct: 1221 VAYGGGRFVAVGMEGHVVISEDNGGSWTALPSDPVTRPTNLNGVAFGAGTFVAAG-DFGQ 1279
Query: 350 VVT 352
+VT
Sbjct: 1280 IVT 1282
Score = 39 (18.8 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 335 GVKVIQIAAGAEHSAVVTENRAI 357
G+ + AAGA SA+ + A+
Sbjct: 1850 GISITNSAAGANSSALFVVDTAV 1872
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 151 GDGTFGQLGHGD 162
G+GTF +G GD
Sbjct: 1410 GNGTFVAVGDGD 1421
Score = 37 (18.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKV 381
+ WG G +G G+ +HP +
Sbjct: 1407 IAWGNGTFVAVGDGDPGTTLHPPI 1430
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 209 (78.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 83/319 (26%), Positives = 131/319 (41%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
C H +AL + G+ ++WGR GQLGHG+M+ P V+ H+ I +A
Sbjct: 65 CASFHCVALD-----VEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHK--IVKAAA 117
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-----FVNKNVHQIACGMR 188
G NH+ VSD G G +GQLG G ++ V+V S V+ V +ACG
Sbjct: 118 GRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGAD 177
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKD-----RIRSVSL-------PQVTIGLHDIE 236
+ V L G + G + GQLG D + SV L P+ L
Sbjct: 178 FT-VWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGET 236
Query: 237 IVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCXXXXXXXXXXXXXXLGWNHVL 292
IV ++ + + A+ G++YTWG G + L N +L
Sbjct: 237 IVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAIL 296
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
GG G L ++ + + + + +L G + + +G+ H V
Sbjct: 297 SAGSANSACTAGG---GQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGA 353
Query: 353 ENRAIMTWGWGEHGQLGLG 371
++ I +WG ++G+LG G
Sbjct: 354 DSSCI-SWGHAQYGELGYG 371
Score = 180 (68.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 86/353 (24%), Positives = 137/353 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+ ++WG GQLG G + A G H + ++ +G F
Sbjct: 78 RCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLG---F 134
Query: 95 SWGRGSSGQLGHGEMVDALY-------PKPVTFFDGHRYTITHISAGWNHSGFVS--DSG 145
W + GQLG G + P P D +T+++ G + + ++S +
Sbjct: 135 GWNK--YGQLGLGSAKNGFVSVEVESTPLPCVVSD----EVTNVACGADFTVWLSSTEGA 188
Query: 146 CLFTCGDGTFGQLGHGD--------------YRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+ T G +GQLGHG Y + P ++S + + ++ACG H++
Sbjct: 189 SILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTV 248
Query: 192 VLLKDCLGNQVYGFGSGKRGQLG--VSKDRI--RSVSLPQVTIGLHDIEIVGISANGDRS 247
+ K+ VY +G G G+LG KD R + + Q L I +SA S
Sbjct: 249 AVDKN---GYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAI--LSAGSANS 303
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGG 305
A + G LY WG+ N+ D + G H V D + G
Sbjct: 304 ACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFV-GADSSCISWGH 362
Query: 306 SHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
+ +G L P S S A +KV L+G+ V+ +A G HS V+ + I
Sbjct: 363 AQYGELGYGPNGQKS----SAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDI 411
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + L +G G + G L + + RP +V VS L K+++ AAG H+
Sbjct: 69 HCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRP-TV----VSGLSKHKIVKAAAGRNHTV 123
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQ-IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VV+++ + +GW ++GQLGLG+ + + +V + D V CG+ FT +S
Sbjct: 124 VVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLS 183
Score = 44 (20.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
+G C H V+ + +R QLEV+ G G
Sbjct: 393 MGVACGFCHSMVIVDRTDIADRLEQLEVYDGKG 425
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 68/243 (27%), Positives = 103/243 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L D ACG +HVLAL++ ++F+
Sbjct: 412 IMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTER-----ELFA 466
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG SG+LG G P+ V G + G + S ++ G CG F
Sbjct: 467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQE--AQRVVCGIDSSMILTVPGQALACGSNRF 524
Query: 156 GQLG--H---GDYR-SHSSPVKVSSFV--------NKNVHQIACGMRHSLVLLK--DCLG 199
+LG H G+ H + SF + + I G HS + DC
Sbjct: 525 NKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDC-- 582
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Y FGS + GQLG + R P GL I++ ++ + A+ AE +Y+W
Sbjct: 583 ---YTFGSNQHGQLGTNTRR--GSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSW 637
Query: 260 GRG 262
G+G
Sbjct: 638 GKG 640
Score = 146 (56.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 50/180 (27%), Positives = 76/180 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDAL-YPKPV---TFFDGHR-YTITHISAGWNHSGFVSDSG 145
G++ W G G + A+ P+P F +G TI H++ G + ++D G
Sbjct: 351 GRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRG 410
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ T G G+ G LGHG S P V + + + Q+ACG H L L + +++ +
Sbjct: 411 IIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTE---RELFAW 467
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G G G+LG+ S S PQ E + D S L+ G G FN
Sbjct: 468 GRGDSGRLGLGTRE--SHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFN 525
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 65/248 (26%), Positives = 93/248 (37%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ +ACG CL ++ + FGSG G LG + +S P + L E+
Sbjct: 393 IKHVACGD-----FFTACLTDRGIIMTFGSGSNGCLGHGS--LTDISQPTIVEALLGYEM 445
Query: 238 VGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWN 289
V ++ ALS E L+ WGRG + +C + G +
Sbjct: 446 VQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGID 505
Query: 290 HVLVLTGDGEVLMLGGS--------HHGMLSDP-ERVSSTRPLSVALEKVSNLDGVKVIQ 340
++LT G+ L G + H + +P LS L + LD ++
Sbjct: 506 SSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLS 565
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFC 399
I G HSA VT + T+G +HGQLG P KV L V C
Sbjct: 566 IDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGL-----EGIKMAMVAC 620
Query: 400 GSGFTYAI 407
G FT AI
Sbjct: 621 GDAFTVAI 628
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 52/214 (24%), Positives = 85/214 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
++++WG G G+LG G CG + LT P + G
Sbjct: 463 ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSN 522
Query: 93 VFS-WGRG--SSGQ--LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
F+ G S G+ + H ++ +AL + + + I G HS V+ SG
Sbjct: 523 RFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDC 582
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG R +P KV + +ACG ++ + + ++VY +G
Sbjct: 583 YTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAE---SEVYSWGK 639
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
G RG+LG +D + P H + +S
Sbjct: 640 GARGRLG-RRDEDAGLPRPVQLDETHPYTVTSVS 672
Score = 117 (46.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 36/119 (30%), Positives = 51/119 (42%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG H +T G+ G + HG L R S P KV L+G+K+ +A G
Sbjct: 568 LGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPC-----KVQGLEGIKMAMVACGD 622
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
+ + + +WG G G+LG + D P+ V L DE + T V C G T
Sbjct: 623 AFTVAIGAESEVYSWGKGARGRLGRRDE-DAGLPRPVQL-DE-THPYTVTSVSCCHGNT 678
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 202 (76.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 67/243 (27%), Positives = 107/243 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L+D ACG +HVLAL++ ++F+
Sbjct: 420 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTER-----ELFA 474
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G CG F
Sbjct: 475 WGRGDGGRLGLGTRESHCCPQLVPMPPGQE--AQRVVCGIDSSMILTVPGQALACGSNRF 532
Query: 156 GQLGH-----GDYRS-HSSPVKVSSFV--------NKNVHQIACGMRHSLVLLK--DCLG 199
+LG G+ + H + +F + + + G HSL+L DC
Sbjct: 533 NKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDC-- 590
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Y FGS + GQLG + R+ P GL I+I ++ + A+ AEG +++W
Sbjct: 591 ---YTFGSNQHGQLGTNARRVSRA--PCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSW 645
Query: 260 GRG 262
G+G
Sbjct: 646 GKG 648
Score = 146 (56.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 50/180 (27%), Positives = 78/180 (43%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDAL-YPKP--VT-FFDGHR-YTITHISAGWNHSGFVSDSG 145
G++ W G G + A+ P+P V+ F +G TI H++ G + ++D G
Sbjct: 359 GRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRG 418
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ T G G+ G LGHG S P V + + + Q+ACG H L L + +++ +
Sbjct: 419 IIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTE---RELFAW 475
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G G G+LG+ S PQ+ E + D S L+ G G FN
Sbjct: 476 GRGDGGRLGLGTRE--SHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFN 533
Score = 140 (54.3 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITH 130
A G +T +I + G G G L G ++ P+ V+ F +G TI H
Sbjct: 346 AAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGA-IEQPQPQFVSRFLEGQSGVTIKH 403
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++ G + ++D G + T G G+ G LGHG S P V + + + Q+ACG H
Sbjct: 404 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHV 463
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGV 215
L L + +++ +G G G+LG+
Sbjct: 464 LALSTE---RELFAWGRGDGGRLGL 485
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 65/247 (26%), Positives = 95/247 (38%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ +ACG L CL ++ + FGSG G LG + +S P + L E+
Sbjct: 401 IKHVACGD-----LFTACLTDRGIIMTFGSGSNGCLGHGS--LNDISQPTIVEALLGYEM 453
Query: 238 VGISANGDRSAALSAEGHLYTWGRGFNS-----TSDVNCXXXXXXX---XXXXXXXLGWN 289
V ++ ALS E L+ WGRG T + +C G +
Sbjct: 454 VQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGID 513
Query: 290 HVLVLTGDGEVLMLGGSHHGMLS-DPERVSST-RPLSVALEKVS-------NLDGVKVIQ 340
++LT G+ L G + L DP + P E V+ LD ++
Sbjct: 514 SSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLS 573
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
+ G HS ++T + T+G +HGQLG P V G + T V CG
Sbjct: 574 VDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQ-GLQGIKIST---VACG 629
Query: 401 SGFTYAI 407
FT AI
Sbjct: 630 DAFTVAI 636
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 49/214 (22%), Positives = 84/214 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
++++WG G G+LG G CG + LT P + G
Sbjct: 471 ELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSN 530
Query: 93 VFS-WGRG--SSGQ--LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
F+ G S G+ H ++ +A+ P+ + + + G HS ++ SG
Sbjct: 531 RFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDC 590
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG R +P +V + +ACG ++ + + +V+ +G
Sbjct: 591 YTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAE---GEVFSWGK 647
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
G RG+LG KD + P H + +S
Sbjct: 648 GARGRLG-RKDEDAGLPRPVQLDETHPYTVTSVS 680
Score = 117 (46.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 37/119 (31%), Positives = 52/119 (43%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG H L+LT G+ G + HG L R S P +V L G+K+ +A G
Sbjct: 576 LGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPC-----RVQGLQGIKISTVACGD 630
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
+ + + +WG G G+LG + D P+ V L DE + T V C G T
Sbjct: 631 AFTVAIGAEGEVFSWGKGARGRLGRKDE-DAGLPRPVQL-DE-THPYTVTSVSCCHGNT 686
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 191 (72.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 60/231 (25%), Positives = 106/231 (45%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
++ G H+L+L D G QV+ +G+G+ GQLG + + P++ L + + ++
Sbjct: 163 RLELGAEHALLL--DAAG-QVFSWGAGRHGQLG--HGTLEAEPEPRLLEALQGLRMAEVA 217
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
A G S LS G +Y WG +N + + L DG +
Sbjct: 218 AGGWHSVCLSETGDIYIWG--WNESGQLALPTKSLAEDGKTTA----GEASGLEEDGSEV 271
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G P + +P L+ +S G + ++++ G+ H+AV+T + TWG
Sbjct: 272 KRGSA--GEDGAPAPFIAVQPFPALLD-LS--PGSEAVKVSCGSRHTAVLTRTGELYTWG 326
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 409
WG++GQLG +T P V + F ++ Q+ V CG + + YA+ +
Sbjct: 327 WGKYGQLGHKDTTTLDRPCRV---EYFVDKQLQVRTVSCGPWNTYVYAVEK 374
Score = 118 (46.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
RGS+G+ G A+ P P +S G H+ ++ +G L+T G G +GQ
Sbjct: 273 RGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQ 332
Query: 158 LGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
LGH D + P +V FV+K V ++CG
Sbjct: 333 LGHKDTTTLDRPCRVEYFVDKQLQVRTVSCG 363
Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L + G+VFSWG G GQLGHG + P+ + G R + ++AG
Sbjct: 167 GAEHALLLDA-----AGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLR--MAEVAAG 219
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS +S++G ++ G GQL
Sbjct: 220 GWHSVCLSETGDIYIWGWNESGQL 243
Score = 98 (39.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 25/70 (35%), Positives = 31/70 (44%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWGAG GQLG G L E A GG H + L+ G ++
Sbjct: 179 QVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSET-----GDIY 233
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 234 IWGWNESGQL 243
Score = 56 (24.8 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 91 GKVFSWGRGSSGQ-LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
G F +G GQ LG G P+P+ G + +SA W+++ FV+ G
Sbjct: 7 GTWFGFGFCGFGQALGSGLGRQVHSPEPLRT-PGGSLGVCRVSASWSYTAFVTRGG 61
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 189 (71.6 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 61/221 (27%), Positives = 99/221 (44%)
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
LL D G QV+ +G G+ GQLG + + P++ L + + ++A G S +S
Sbjct: 171 LLLDAAG-QVFSWGGGRHGQLG--HGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSE 227
Query: 253 EGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDG-EVLMLGGSHHGML 311
G +Y WG +N + + N DG +V GG+ G
Sbjct: 228 TGDIYIWG--WNESGQLALPTRNLAEDGETVAREELNE------DGSQVKRTGGAEDGA- 278
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
P + +P L+ D VK + G+ H+AVVT + TWGWG++GQLG
Sbjct: 279 --PAPFIAVQPFPALLDLPMGSDAVKA---SCGSRHTAVVTRTGELYTWGWGKYGQLGHE 333
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 409
+T P+ V + F ++ Q++ V CG + + YA+ +
Sbjct: 334 DTTSLDRPRRV---EYFVDKQLQVKAVTCGPWNTYVYAVEK 371
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L + G+VFSWG G GQLGHG + L P+ + G + ++AG
Sbjct: 166 GAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQG--LVMAEVAAG 218
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS VS++G ++ G GQL
Sbjct: 219 GWHSVCVSETGDIYIWGWNESGQL 242
Score = 104 (41.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K V + CG
Sbjct: 304 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCG 360
Score = 92 (37.4 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L E A GG H + ++ G ++
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET-----GDIY 232
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 233 IWGWNESGQL 242
Score = 55 (24.4 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 91 GKVFSWGRGSSGQ-LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G F +G GQ LG G P P+ G I +SA W+++ FV+ G L
Sbjct: 7 GAWFGFGFCGFGQELGSGRGRQVHSPSPLRA--G--VDICRVSASWSYTAFVTRGGRLEL 62
Query: 150 CGDGTFGQLG 159
G + G G
Sbjct: 63 SGSAS-GAAG 71
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 161 (61.7 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 48/152 (31%), Positives = 79/152 (51%)
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
+D + + H SAG HS + G +++ G G G+LG G+ +S++ P + NK +
Sbjct: 434 WDKKKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRI 493
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVG 239
+ G HS + D N VY +G+GK +LG D I + P++ L H+ ++
Sbjct: 494 LYVCAGTSHSGCI--DSNYN-VYTWGNGKFYKLGHGNDDI-DIYYPKLVECLNHNKKVCM 549
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSD-VN 270
+S S AL+ +G +Y WG FN T++ VN
Sbjct: 550 LSFGCFNSLALNVKGDVYVWGT-FNITNNYVN 580
Score = 156 (60.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 73/284 (25%), Positives = 126/284 (44%)
Query: 138 SGFVSDS-GCLFTCGDGTFGQLGHG-DYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVL 193
+ + SD G L+ G+ G++G G DY P K++ +NK +++ + G HSL L
Sbjct: 897 NNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKIN-IINK-IYKCSLGNSHSLFL 954
Query: 194 LKDCLGNQVYGFGSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
N++Y GS G+LG+ SK VS+P I ++I I I A S L
Sbjct: 955 TNT---NELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIIL 1011
Query: 251 SAEGHLYTWG---RGFNSTSD-VNCXXXXXXXXXXXXXXLG--WNHVLVLTGDGEVLMLG 304
S +G +Y +G +G N S+ ++C + + HV LT D ++ +G
Sbjct: 1012 SVDGFIYIFGEFIKGSNGNSNNMSCEVISLYNEITNVKYMNGKYEHVFFLTYDNKLFGIG 1071
Query: 305 GSHH-GMLSDPERVSS--TRP-LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMT 359
+ + +L D E+ ++ +P L K +N K+I+ + + N + I
Sbjct: 1072 NNKNCQILCDNEKENNYIKKPKLITYFLKENN----KIIESIFSFHNVTFIQFNNSEIFA 1127
Query: 360 WGWGE--HGQLGLGNTCDQI-HP-KVVNLGDEFQNRDTQLEVFC 399
WG+ H +G+ N + HP K++ + +D C
Sbjct: 1128 WGYTNNYHLCIGIPNNIKYLKHPTKIIKTWLTYDQKDLDYNGSC 1171
Score = 134 (52.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 44/137 (32%), Positives = 67/137 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+ G H LA + G ++SWG G +G+LG G + Y KP I ++
Sbjct: 445 SAGSKHSLACN-----LHGDIYSWGYGGNGRLGLGNIKS--YNKPQLIKGLRNKRILYVC 497
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFV-NKNVHQIACGMRHS 190
AG +HSG + + ++T G+G F +LGHG D P V NK V ++ G +S
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 191 LVLLKDCLGNQVYGFGS 207
L L + G+ VY +G+
Sbjct: 558 LAL--NVKGD-VYVWGT 571
Score = 124 (48.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 134 GWNH-SGFVSDSGCLFTCGDGTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIACGMRH 189
G +H S F+ +SG ++T G G+LG+G++ + P+ ++ VNK + +IACG +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII-KIACG--Y 815
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
+ VL +G VYG+G + QLG+ KD V + +T ++ I A D S
Sbjct: 816 NYVLCVSDVG-LVYGWGKNDKSQLGIGVIKDFYEPVHVKNLT------NVINIFAGYDHS 868
Query: 248 AALSAEGHLYTWGR--GFNSTSDVN 270
A + + L G G N+ ++VN
Sbjct: 869 ACIINK--LLDKGNTNGVNNVNNVN 891
Score = 106 (42.4 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 91 GKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
GKV++ G +G+LG+GE + + P+ + I I+ G+N+ VSD G ++
Sbjct: 771 GKVYTAGYNKNGELGNGEFNLKKKFGVPI-LLNICVNKIIKIACGYNYVLCVSDVGLVYG 829
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--GN 200
G QLG G + PV V + N V I G HS ++ L GN
Sbjct: 830 WGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACIINKLLDKGN 880
Score = 102 (41.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 36/108 (33%), Positives = 50/108 (46%)
Query: 122 DGHRYTITH---ISAGWNHSGFVS---DSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSS 174
D H+Y IS G +H V+ + +FT G + QLG G + R ++P V
Sbjct: 10 DIHKYIFPFFPKISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCF 69
Query: 175 FVNKNVHQIACGMRHSLVLLK---DCLGNQVYGFGSGKRGQLGVSKDR 219
F + V I C + VL+K + +G VY FG G G LG K R
Sbjct: 70 FDSFIVASICCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKR 117
Score = 100 (40.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++SWG G +G+LG G + G +H + S +V ++
Sbjct: 460 IYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNV-----YT 514
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG G +LGHG + +D YPK V + H + +S G +S ++ G ++ G
Sbjct: 515 WGNGKFYKLGHGNDDIDIYYPKLVECLN-HNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 98 (39.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H L G++ G +G L S +P + + L +++ + AG
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKP-----QLIKGLRNKRILYVCAGTS 501
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
HS + N + TWG G+ +LG GN D +PK+V
Sbjct: 502 HSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 89 (36.4 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
S+ +K N+ VI +AG++HS + I +WG+G +G+LGLGN P+++
Sbjct: 431 SIKWDKKKNV----VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLI 485
Score = 84 (34.6 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
KV++ G +G+LG G L + ACG +VL + S V G
Sbjct: 772 KVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCV---SDV--GL 826
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
V+ WG+ QLG G + D P V + + +I AG++HS +
Sbjct: 827 VYGWGKNDKSQLGIGVIKDFYEPVHVK----NLTNVINIFAGYDHSACI 871
Score = 79 (32.9 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
+CG H LA+ + GG ++SWG + G +G+G + P P+ F + H
Sbjct: 355 SCGDMHTLAICT-----GGVLYSWGYNNFGCIGNGTNQNVYEPTPI-FLEPH 400
Score = 76 (31.8 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 287 GWNHVLV-LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H V L G+V G + +G L + E + + V + + N+ K+I+IA G
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGE-FNLKKKFGVPI--LLNICVNKIIKIACGY 815
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
+ V++ + WG + QLG+G D P V NL
Sbjct: 816 NYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNL 855
Score = 67 (28.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/171 (22%), Positives = 66/171 (38%)
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXX 282
T G++++ V NG + + G LY WG G C
Sbjct: 881 TNGVNNVNNVN-GVNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN 939
Query: 283 XX---XLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
LG +H L LT E+ + G +++G L E+ + KV + + +
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIK 999
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
I AG +S +++ + I +G G G N + +V++L +E N
Sbjct: 1000 DILAGNTYSIILSVDGFIYIFGEFIKGSNGNSNN---MSCEVISLYNEITN 1047
Score = 57 (25.1 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSV--IGGKV 93
+++WG + QLG G + C + + +V IG V
Sbjct: 41 IFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSV 100
Query: 94 FSWGRGSSGQLGH 106
+S+G+G++G LG+
Sbjct: 101 YSFGKGNNGLLGY 113
Score = 54 (24.1 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 339 IQIAAGAEHSAV-VTENRAIMTWGWGEHGQLGLG 371
++I G++H +V + E+ + T G+ ++G+LG G
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNG 787
Score = 44 (20.5 bits), Expect = 9.2e-11, Sum P(3) = 9.2e-11
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G+N+VL ++ G V G + L P+ V NL VI I AG +
Sbjct: 814 GYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHV-----KNL--TNVINIFAGYD 866
Query: 347 HSAVV 351
HSA +
Sbjct: 867 HSACI 871
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 240 ISANGDRSAALSAEGHLYTWG 260
IS + A+ G LY+WG
Sbjct: 354 ISCGDMHTLAICTGGVLYSWG 374
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 161 (61.7 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 48/152 (31%), Positives = 79/152 (51%)
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
+D + + H SAG HS + G +++ G G G+LG G+ +S++ P + NK +
Sbjct: 434 WDKKKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRI 493
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVG 239
+ G HS + D N VY +G+GK +LG D I + P++ L H+ ++
Sbjct: 494 LYVCAGTSHSGCI--DSNYN-VYTWGNGKFYKLGHGNDDI-DIYYPKLVECLNHNKKVCM 549
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSD-VN 270
+S S AL+ +G +Y WG FN T++ VN
Sbjct: 550 LSFGCFNSLALNVKGDVYVWGT-FNITNNYVN 580
Score = 156 (60.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 73/284 (25%), Positives = 126/284 (44%)
Query: 138 SGFVSDS-GCLFTCGDGTFGQLGHG-DYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVL 193
+ + SD G L+ G+ G++G G DY P K++ +NK +++ + G HSL L
Sbjct: 897 NNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKIN-IINK-IYKCSLGNSHSLFL 954
Query: 194 LKDCLGNQVYGFGSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
N++Y GS G+LG+ SK VS+P I ++I I I A S L
Sbjct: 955 TNT---NELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIIL 1011
Query: 251 SAEGHLYTWG---RGFNSTSD-VNCXXXXXXXXXXXXXXLG--WNHVLVLTGDGEVLMLG 304
S +G +Y +G +G N S+ ++C + + HV LT D ++ +G
Sbjct: 1012 SVDGFIYIFGEFIKGSNGNSNNMSCEVISLYNEITNVKYMNGKYEHVFFLTYDNKLFGIG 1071
Query: 305 GSHH-GMLSDPERVSS--TRP-LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMT 359
+ + +L D E+ ++ +P L K +N K+I+ + + N + I
Sbjct: 1072 NNKNCQILCDNEKENNYIKKPKLITYFLKENN----KIIESIFSFHNVTFIQFNNSEIFA 1127
Query: 360 WGWGE--HGQLGLGNTCDQI-HP-KVVNLGDEFQNRDTQLEVFC 399
WG+ H +G+ N + HP K++ + +D C
Sbjct: 1128 WGYTNNYHLCIGIPNNIKYLKHPTKIIKTWLTYDQKDLDYNGSC 1171
Score = 134 (52.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 44/137 (32%), Positives = 67/137 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+ G H LA + G ++SWG G +G+LG G + Y KP I ++
Sbjct: 445 SAGSKHSLACN-----LHGDIYSWGYGGNGRLGLGNIKS--YNKPQLIKGLRNKRILYVC 497
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFV-NKNVHQIACGMRHS 190
AG +HSG + + ++T G+G F +LGHG D P V NK V ++ G +S
Sbjct: 498 AGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNS 557
Query: 191 LVLLKDCLGNQVYGFGS 207
L L + G+ VY +G+
Sbjct: 558 LAL--NVKGD-VYVWGT 571
Score = 124 (48.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 134 GWNH-SGFVSDSGCLFTCGDGTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIACGMRH 189
G +H S F+ +SG ++T G G+LG+G++ + P+ ++ VNK + +IACG +
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII-KIACG--Y 815
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
+ VL +G VYG+G + QLG+ KD V + +T ++ I A D S
Sbjct: 816 NYVLCVSDVG-LVYGWGKNDKSQLGIGVIKDFYEPVHVKNLT------NVINIFAGYDHS 868
Query: 248 AALSAEGHLYTWGR--GFNSTSDVN 270
A + + L G G N+ ++VN
Sbjct: 869 ACIINK--LLDKGNTNGVNNVNNVN 891
Score = 106 (42.4 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 91 GKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
GKV++ G +G+LG+GE + + P+ + I I+ G+N+ VSD G ++
Sbjct: 771 GKVYTAGYNKNGELGNGEFNLKKKFGVPI-LLNICVNKIIKIACGYNYVLCVSDVGLVYG 829
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--GN 200
G QLG G + PV V + N V I G HS ++ L GN
Sbjct: 830 WGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACIINKLLDKGN 880
Score = 102 (41.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 36/108 (33%), Positives = 50/108 (46%)
Query: 122 DGHRYTITH---ISAGWNHSGFVS---DSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSS 174
D H+Y IS G +H V+ + +FT G + QLG G + R ++P V
Sbjct: 10 DIHKYIFPFFPKISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCF 69
Query: 175 FVNKNVHQIACGMRHSLVLLK---DCLGNQVYGFGSGKRGQLGVSKDR 219
F + V I C + VL+K + +G VY FG G G LG K R
Sbjct: 70 FDSFIVASICCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKR 117
Score = 100 (40.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 30/117 (25%), Positives = 51/117 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++SWG G +G+LG G + G +H + S +V ++
Sbjct: 460 IYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNV-----YT 514
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG G +LGHG + +D YPK V + H + +S G +S ++ G ++ G
Sbjct: 515 WGNGKFYKLGHGNDDIDIYYPKLVECLN-HNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 98 (39.6 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 27/97 (27%), Positives = 43/97 (44%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H L G++ G +G L S +P + + L +++ + AG
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKP-----QLIKGLRNKRILYVCAGTS 501
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVV 382
HS + N + TWG G+ +LG GN D +PK+V
Sbjct: 502 HSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 89 (36.4 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
S+ +K N+ VI +AG++HS + I +WG+G +G+LGLGN P+++
Sbjct: 431 SIKWDKKKNV----VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLI 485
Score = 84 (34.6 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
KV++ G +G+LG G L + ACG +VL + S V G
Sbjct: 772 KVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCV---SDV--GL 826
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
V+ WG+ QLG G + D P V + + +I AG++HS +
Sbjct: 827 VYGWGKNDKSQLGIGVIKDFYEPVHVK----NLTNVINIFAGYDHSACI 871
Score = 79 (32.9 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
+CG H LA+ + GG ++SWG + G +G+G + P P+ F + H
Sbjct: 355 SCGDMHTLAICT-----GGVLYSWGYNNFGCIGNGTNQNVYEPTPI-FLEPH 400
Score = 76 (31.8 bits), Expect = 5.2e-14, Sum P(3) = 5.2e-14
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 287 GWNHVLV-LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H V L G+V G + +G L + E + + V + + N+ K+I+IA G
Sbjct: 759 GSDHFSVFLLESGKVYTAGYNKNGELGNGE-FNLKKKFGVPI--LLNICVNKIIKIACGY 815
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
+ V++ + WG + QLG+G D P V NL
Sbjct: 816 NYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNL 855
Score = 67 (28.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/171 (22%), Positives = 66/171 (38%)
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXX 282
T G++++ V NG + + G LY WG G C
Sbjct: 881 TNGVNNVNNVN-GVNGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN 939
Query: 283 XX---XLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
LG +H L LT E+ + G +++G L E+ + KV + + +
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIK 999
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
I AG +S +++ + I +G G G N + +V++L +E N
Sbjct: 1000 DILAGNTYSIILSVDGFIYIFGEFIKGSNGNSNN---MSCEVISLYNEITN 1047
Score = 57 (25.1 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSV--IGGKV 93
+++WG + QLG G + C + + +V IG V
Sbjct: 41 IFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSV 100
Query: 94 FSWGRGSSGQLGH 106
+S+G+G++G LG+
Sbjct: 101 YSFGKGNNGLLGY 113
Score = 54 (24.1 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 339 IQIAAGAEHSAV-VTENRAIMTWGWGEHGQLGLG 371
++I G++H +V + E+ + T G+ ++G+LG G
Sbjct: 754 VKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNG 787
Score = 44 (20.5 bits), Expect = 9.2e-11, Sum P(3) = 9.2e-11
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G+N+VL ++ G V G + L P+ V NL VI I AG +
Sbjct: 814 GYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHV-----KNL--TNVINIFAGYD 866
Query: 347 HSAVV 351
HSA +
Sbjct: 867 HSACI 871
Score = 39 (18.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 240 ISANGDRSAALSAEGHLYTWG 260
IS + A+ G LY+WG
Sbjct: 354 ISCGDMHTLAICTGGVLYSWG 374
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 204 (76.9 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 109/410 (26%), Positives = 168/410 (40%)
Query: 21 KPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVL 80
K K+ Q+ V G G GQLG G E A GG H +
Sbjct: 22 KLKVSHISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGIVQAVA-GGMHTV 80
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
L+ G V+++G G LG + P G + I +SAG +HS
Sbjct: 81 CLSDT-----GNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEK--IIQVSAGDSHSAA 133
Query: 141 VSDSGCLFTCG-----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+++ G ++ G +G G L + + PVKV ++K V +I G H LV+L
Sbjct: 134 LTEDGGVYVWGSFRDNNGVIGLLE--PMKKCTVPVKVP--IDKPVVKIVSGNDH-LVMLT 188
Query: 196 DCLGNQVYGFGSGKRGQLG-VSK---DR-----IRSVSLPQVTIGLHDIEIV--GISANG 244
++Y G G++GQLG V++ +R + + PQ+ I ++V +
Sbjct: 189 --AHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGA 246
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSD----VNCXXXXXXXXXXXXXXLGWNHVLVL 294
+ A+S EGH+Y +G G ST+ V G +H L L
Sbjct: 247 YFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCL 306
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+G+ LG + +G L + V +V V + V+V+ A GA S VT+
Sbjct: 307 NSEGKAYSLGRAEYGRLGLGKDVGEKSEPTV----VPGISDVQVV--ACGASVSYAVTKQ 360
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
++ +WG G + QLG G D+ P V G + +NR L V G T
Sbjct: 361 GSVFSWGMGTNLQLGTGEEEDEWSP-VEMTGKQLENR-VVLSVSSGGQHT 408
Score = 162 (62.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 85/340 (25%), Positives = 144/340 (42%)
Query: 91 GKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V G+G GQLG GE +++ P VT +G I AG H+ +SD+G ++T
Sbjct: 35 GLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEG----IVQAVAGGMHTVCLSDTGNVYT 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + + Q++ G HS L +D G V+G
Sbjct: 91 FGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDG-GVYVWGSFRDN 149
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
G +G+ + ++ ++P V + + D +V I + D L+A G LYT G G
Sbjct: 150 NGVIGLLEP-MKKCTVP-VKVPI-DKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGR 206
Query: 270 NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLG---GSH-----------HGM-LSDP 314
L ++++ G+V+ G++ +G LS+
Sbjct: 207 VAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNY 266
Query: 315 ERVS--STRPLSVALEKVSNLDGVKV--IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
++ ST V + K+S+ + + G H+ + + G E+G+LGL
Sbjct: 267 HQLGTQSTNTCFVPV-KLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGL 325
Query: 371 GNTC-DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G ++ P VV G D Q+ V CG+ +YA+++
Sbjct: 326 GKDVGEKSEPTVVP-GIS----DVQV-VACGASVSYAVTK 359
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L S GK +S GR G+LG G+ V +P T G + ++ G
Sbjct: 299 GQHHTLCLNSE-----GKAYSLGRAEYGRLGLGKDVGEK-SEP-TVVPGIS-DVQVVACG 350
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLV 192
+ S V+ G +F+ G GT QLG G+ SPV+++ N+ V ++ G +H+++
Sbjct: 351 ASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVL 410
Query: 193 LLKD 196
L+KD
Sbjct: 411 LVKD 414
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 208 (78.3 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 67/243 (27%), Positives = 110/243 (45%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L+D ACG +HVLAL++ ++F+
Sbjct: 421 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTER-----ELFA 475
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V+ G + G + S ++ G CG F
Sbjct: 476 WGRGDGGRLGLGTRESHSCPQQVSMPPGQE--AQRVVCGIDSSMILTVPGRALACGSNRF 533
Query: 156 GQLGH-----GDYRSHS---------SPVKVSSFVNKNVHQIACGMRHSLVLLK--DCLG 199
+LG G+ + + +P+ + F + + + G HS + DC
Sbjct: 534 NKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDC-- 591
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Y FGS + GQLG + R+ QV GL +I+I ++ + A+ AEG +Y+W
Sbjct: 592 ---YTFGSNQHGQLGTNARRVSRAPC-QVQ-GLQNIKIAMVACGDAFTVAVGAEGEVYSW 646
Query: 260 GRG 262
G+G
Sbjct: 647 GKG 649
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 86/337 (25%), Positives = 131/337 (38%)
Query: 91 GKVFSWGRGSSGQLGHGEM----VDALYPKPVT-FFDGHR-YTITHISAGWNHSGFVSDS 144
G++ W G G G + V+ P+ V+ F +G TI H++ G + ++D
Sbjct: 360 GRLILWEAPPLGA-GGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDR 418
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G + T G G+ G LGHG S P V + + + Q+ACG H L L + +++
Sbjct: 419 GIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTE---RELFA 475
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-F 263
+G G G+LG+ S S PQ E + D S L+ G G F
Sbjct: 476 WGRGDGGRLGLGTRE--SHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRF 533
Query: 264 NSTS-DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM---LGGSHH----------- 308
N D L + + D E L+ LG +H
Sbjct: 534 NKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYT 593
Query: 309 -GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G + ++ R +S A +V L +K+ +A G + V + +WG G G+
Sbjct: 594 FGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGR 653
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
LG + D P+ V L DE T V C G T
Sbjct: 654 LGRRDE-DAGLPRPVQL-DEIHPY-TVTSVSCCHGNT 687
Score = 149 (57.5 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 53/214 (24%), Positives = 87/214 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
++++WG G G+LG G CG + LT P + G
Sbjct: 472 ELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSN 531
Query: 93 VFS-WG--RGSSGQ--LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
F+ G R S G+ + ++ +AL P+ R + + G HS V+ SG
Sbjct: 532 RFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDC 591
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG R +P +V N + +ACG ++ + + +VY +G
Sbjct: 592 YTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAE---GEVYSWGK 648
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
G RG+LG +D + P +H + +S
Sbjct: 649 GARGRLG-RRDEDAGLPRPVQLDEIHPYTVTSVS 681
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 47/160 (29%), Positives = 73/160 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITH 130
A G +T +I + G G G L G V+ P+ V+ F +G TI H
Sbjct: 347 AAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGA-VEQQQPQFVSRFLEGQSGVTIKH 404
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++ G + ++D G + T G G+ G LGHG S P V + + + Q+ACG H
Sbjct: 405 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHV 464
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS----VSLP 226
L L + +++ +G G G+LG+ S VS+P
Sbjct: 465 LALSTE---RELFAWGRGDGGRLGLGTRESHSCPQQVSMP 501
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 75/302 (24%), Positives = 116/302 (38%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACG 186
+ ++AG V+ SG L G G G + + FV++ + Q
Sbjct: 343 VVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGALLPGAVEQQQPQFVSRFLEGQSGVT 401
Query: 187 MRHSLV--LLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
++H L CL ++ + FGSG G LG + +S P + L E+V ++
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS--LNDISQPTIVEALLGYEMVQVAC 459
Query: 243 NGDRSAALSAEGHLYTWGRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVL 294
ALS E L+ WGRG + +C + G + ++L
Sbjct: 460 GASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMIL 519
Query: 295 TGDGEVLMLGGSHH---GM--LSDPERVSSTRPLSVALEKV----SNLDGVKVIQIAAGA 345
T G L G + G+ LS E + + + AL + D ++ + G
Sbjct: 520 TVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGT 579
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HSA VT + T+G +HGQLG P V G QN + V CG FT
Sbjct: 580 AHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ-G--LQNIKIAM-VACGDAFTV 635
Query: 406 AI 407
A+
Sbjct: 636 AV 637
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 158 (60.7 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 71/280 (25%), Positives = 122/280 (43%)
Query: 42 GTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
G++G G +DE +CGG H L L S ++++ G
Sbjct: 6 GSNGNFQLGLNNDEDVYSPQIVPFDRAIEKISCGGNHTLLLDEDS-----QLWACGDNRK 60
Query: 102 GQLGHGEMVDALY----PKPVTFFD--GHRYTITHISAGWNHSGFV-SDSGCLFTCGDGT 154
GQ G+ E+ + LY P + F H + ++ GW S V +D + +CG+G
Sbjct: 61 GQCGY-EVKEPLYNPLSPDYLRIFTRVSHERWV-FLTCGWEFSVIVHADRRRVCSCGEGL 118
Query: 155 FGQLGHGDYRSHSSPVK---VSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+LG G+ RS+S ++ + +K + I+ G+RH + + + GN +YG G G++
Sbjct: 119 SGELGQGN-RSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNE--GN-LYGCGDGRK 174
Query: 211 GQLG-VSKDRIRSVS-LPQVTIGLHDIEIV-GISANGDRSAALSAEGHLYTWG-RGFNST 266
GQLG V + VS L ++ H +V G+ SA L GH+ G +N
Sbjct: 175 GQLGPVVMKTVNKVSFLGRIE---HAQAVVCGVQF----SAVLQETGHVIVLGGEKWNVA 227
Query: 267 SDVNCXXXXXXXXXXXXXXLG--WNHVLVLTGDGEVLMLG 304
++ + + W+ + +L+ +G V G
Sbjct: 228 AECDAWQANNSELSSSICSISANWSTLSLLSTEGCVYAFG 267
Score = 136 (52.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 54/174 (31%), Positives = 83/174 (47%)
Query: 92 KVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
+V S G G SG+LG G ++ L + + D + I ISAG H V++ G L+
Sbjct: 110 RVCSCGEGLSGELGQGNRSNSQGLREIDIPYLDDKEFIID-ISAGLRHWICVTNEGNLYG 168
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ--IACGMRHSLVLLKDCLGNQVYGFGS 207
CGDG GQLG ++ + KVS F+ + H + CG++ S VL + V G
Sbjct: 169 CGDGRKGQLGPVVMKTVN---KVS-FLGRIEHAQAVVCGVQFSAVLQET---GHVIVLG- 220
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G++ + D ++ + + I ISAN + LS EG +Y +GR
Sbjct: 221 GEKWNVAAECDAWQANNSELSS------SICSISANWSTLSLLSTEGCVYAFGR 268
Score = 127 (49.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 63/223 (28%), Positives = 89/223 (39%)
Query: 99 GSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GS+G QLG D P+ V F D I IS G NH+ + + L+ CGD G
Sbjct: 6 GSNGNFQLGLNNDEDVYSPQIVPF-DR---AIEKISCGGNHTLLLDEDSQLWACGDNRKG 61
Query: 157 QLGHGDYRSHSSPVKVS--SFVNKNVHQ----IACGMRHSLVLLKDCLGNQVYGFGSGKR 210
Q G+ +P+ + H+ + CG S+++ D +V G G
Sbjct: 62 QCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHAD--RRRVCSCGEGLS 119
Query: 211 GQLGVSKDRIRSVSLPQVTIG-LHDIE-IVGISANGDRSAALSAEGHLYTWGRGFNST-- 266
G+LG +R S L ++ I L D E I+ ISA ++ EG+LY G G
Sbjct: 120 GELGQG-NRSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNEGNLYGCGDGRKGQLG 178
Query: 267 ----SDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
VN G VL G V++LGG
Sbjct: 179 PVVMKTVNKVSFLGRIEHAQAVVCGVQFSAVLQETGHVIVLGG 221
Score = 87 (35.7 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
++QIA+G EH+ + T+ +++ +GW EHG + D K + L
Sbjct: 282 IVQIASGTEHNILRTKKGSVLIYGWNEHGNASNDDKRDVYDAKTLQL 328
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 209 (78.6 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 74/258 (28%), Positives = 115/258 (44%)
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G N++ ++D+G +++ G ++G+ GH R P ++ NK + IACG HSL +
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDR--IRSVSLPQVTIGLHDIEIV-GISANGDRSAAL 250
D LG QVY +G+G G+LG+ D + + +L V EI I+A D S L
Sbjct: 262 --DDLG-QVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMIL 318
Query: 251 SAEGHLYTWGRGFN-STSDVNCXXXXXXXXX----------XXXXXLGWNHVLVLTGDGE 299
+ G +Y++G + C W H + L G
Sbjct: 319 GSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACASW-HSVFLDLKGR 377
Query: 300 VLMLGGSHHGMLSDP-ERVSSTRP--LSVALEKVSN-LDGVKVI-QIAAGAEHSAVVTEN 354
V G S +G L SS P +S+ K + L +VI QIA G + V++E+
Sbjct: 378 VYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSES 437
Query: 355 RAIMTWGWGEHGQLGLGN 372
++ +WG QLGL N
Sbjct: 438 GSLYSWGVNTKSQLGLIN 455
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 70/241 (29%), Positives = 108/241 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V+S G + G+ G + D ACG H LA+ G+V+S
Sbjct: 215 VYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDL-----GQVYS 269
Query: 96 WGRGSSGQLGHGEMVDALYPKP--VTFFD--GHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG G+SG+LG G ++ P P ++ + G T I+AG ++S + +G +++ G
Sbjct: 270 WGNGASGRLGLGNDF-SIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFG 328
Query: 152 DGTFGQLGH----GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+LG+ G S+P K+ S + + IAC HS+ L D G +VY GS
Sbjct: 329 SNLHYKLGYKECDGALGFQSTPKKIPSILQ--MKSIACASWHSVFL--DLKG-RVYTCGS 383
Query: 208 GKRGQLGVSKDRIRSVSLPQVTI------G-LHDIEIVGISANGDR-SAALSAEGHLYTW 259
G+LG + S +V+I G L E++ A G + LS G LY+W
Sbjct: 384 STNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSW 443
Query: 260 G 260
G
Sbjct: 444 G 444
Score = 149 (57.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 70/251 (27%), Positives = 107/251 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG--GK 92
+V+SWG G G+LG G +D + A S ++G G
Sbjct: 266 QVYSWGNGASGRLGLG--NDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGD 323
Query: 93 VFSWGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
V+S+G +LG+ E AL PK + + +I A W HS F+ G ++
Sbjct: 324 VYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMK-SIA--CASW-HSVFLDLKGRVY 379
Query: 149 TCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKN---------VHQIACGMRHSLVLLKDC 197
TCG T G+LG S+SS P +VS +K + QIACG + VL +
Sbjct: 380 TCGSSTNGRLGRA-ISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSES- 437
Query: 198 LGNQVYGFGSGKRGQLG-VSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+Y +G + QLG ++ I S P++ L+ I + ALS +G
Sbjct: 438 --GSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGE 495
Query: 256 LYTWGRGFNST 266
++ +G NST
Sbjct: 496 VFCYGD--NST 504
Score = 140 (54.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 52/181 (28%), Positives = 83/181 (45%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+S G S G+ GH + D L P + R I I+ G +HS + D G +++
Sbjct: 213 GAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKR--IKSIACGTHHSLAMDDLGQVYSW 270
Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
G+G G+LG G D+ +P +S N+ IA G +S++L + VY F
Sbjct: 271 GNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSN---GDVYSF 327
Query: 206 GSGKRGQLGVSK-D-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
GS +LG + D + S P+ + +++ I+ S L +G +YT G
Sbjct: 328 GSNLHYKLGYKECDGALGFQSTPKKIPSI--LQMKSIACASWHSVFLDLKGRVYTCGSST 385
Query: 264 N 264
N
Sbjct: 386 N 386
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDG-------H 124
AC H + L + G+V++ G ++G+LG + YP+ V+ +
Sbjct: 363 ACASWHSVFLD-----LKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQ 417
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSHSSPVKVSSFVNKNV 180
I I+ G N + +S+SG L++ G T QLG G +S P V++ +
Sbjct: 418 EEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTI 477
Query: 181 HQIACGMRHSLVLLKD-----CLG-NQVY--GFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
H A G +H +V L D C G N GFG ++ ++K +I + S IG
Sbjct: 478 HSFAVGDQH-VVALSDQGEVFCYGDNSTLQCGFGEVLNFEINLTKVKIETTSSDAPIIGG 536
Query: 233 HDIEIVGISANGDRSA-ALSAEGHLY 257
+ +SA G + +LS++ +++
Sbjct: 537 GGV--FKVSAGGSNTMISLSSDHNIF 560
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 184 (69.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 64/233 (27%), Positives = 99/233 (42%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
++ G H+L+L D G QV+ +G G+ GQLG + + P+V L + + ++
Sbjct: 168 RLELGAEHALLL--DAAG-QVFSWGGGRHGQLG--HGTLEAEREPRVLEALQGLPMAEVA 222
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
A G S +S G +Y WG +N + + +TGD L
Sbjct: 223 AGGWHSVCVSETGDIYIWG--WNESGQLALPARSLAEDGKT-----------ITGDAPGL 269
Query: 302 MLGGSH-----HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
GS G P + +P L+ D VK + G+ H+AVVT
Sbjct: 270 NEDGSEAKRATEGEDGGPTPFIAVQPFPALLDLPLGSDAVKA---SCGSRHTAVVTRTGE 326
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
+ TWGWG++GQLG +T P V + F ++ Q+ V CG TY +
Sbjct: 327 LYTWGWGKYGQLGHKDTTSLDRPCRV---EYFVDKQLQVRTVSCGPWNTYVFA 376
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00093
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L + G+VFSWG G GQLGHG + P+ + G + ++AG
Sbjct: 172 GAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQG--LPMAEVAAG 224
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS VS++G ++ G GQL
Sbjct: 225 GWHSVCVSETGDIYIWGWNESGQL 248
Score = 109 (43.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 47/196 (23%), Positives = 79/196 (40%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G H+ + +G +F+ G G GQLGHG + P + + + ++A G HS
Sbjct: 169 LELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHS 228
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ + + G+ +Y +G + GQL + RS++ TI + G++ +G A
Sbjct: 229 VCVSET--GD-IYIWGWNESGQLALPA---RSLAEDGKTI---TGDAPGLNEDGSE-AKR 278
Query: 251 SAEGHLYTWG-RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHG 309
+ EG G F + G H V+T GE+ G +G
Sbjct: 279 ATEGE--DGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYG 336
Query: 310 MLSDPERVSSTRPLSV 325
L + S RP V
Sbjct: 337 QLGHKDTTSLDRPCRV 352
Score = 108 (43.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K V ++CG
Sbjct: 312 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCG 368
Score = 91 (37.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L E A GG H + ++ G ++
Sbjct: 184 QVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSET-----GDIY 238
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 239 IWGWNESGQL 248
Score = 57 (25.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 91 GKVFSWGRGSSGQ-LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G F +G GQ LG G P+P+ G + +SA W+++ V+ G L
Sbjct: 7 GAWFGFGFCGFGQALGSGRGRQVYSPEPLEV-PGASLDVCRVSASWSYTATVTRGGRLEL 65
Query: 150 CG 151
G
Sbjct: 66 SG 67
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 201 (75.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 69/242 (28%), Positives = 106/242 (43%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G +D +CG +HVLA+T+ +VFS
Sbjct: 419 IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNER-----EVFS 473
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG +G+LG P+ V+ + + G + S +S + CG+ F
Sbjct: 474 WGRGDNGRLGLATQDSHNCPQQVSL--PADFEAQRVLCGVDCSMIMSTQHQILACGNNRF 531
Query: 156 GQLGHGDYRSHSSP--------VKVSSFVNK---NVHQIA---CGMRHSLVLLKDCLGNQ 201
+LG P V + V N +I G HS+ + + Q
Sbjct: 532 NKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEK---GQ 588
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWG 260
+ FGS + GQLG S R S +P GL I + +A GD + A+ AEG +YTWG
Sbjct: 589 CFTFGSNQHGQLGCSHRR--SSRVPYQVSGLQGITM---AACGDAFTLAIGAEGEVYTWG 643
Query: 261 RG 262
+G
Sbjct: 644 KG 645
Score = 154 (59.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 91 GKVFSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHR-YTITHISAGWNHSGFVSDSGC 146
G++ +W S SG+ V+ + P+ ++ F +G TI +S G + ++D G
Sbjct: 359 GRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGI 418
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+ T G G+ G LGHG++ + P V + + + Q++CG H L + + +V+ +G
Sbjct: 419 IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNE---REVFSWG 475
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G G+LG++ S + PQ D E + D S +S + + G FN
Sbjct: 476 RGDNGRLGLATQD--SHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFN 532
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
LT G ++ G +G L T+P + V L G +++Q++ GA H VT
Sbjct: 413 LTDRGIIMTFGSGSNGCLGHGNFNDVTQP-----KIVEALLGYELVQVSCGASHVLAVTN 467
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
R + +WG G++G+LGL P+ V+L +F+ + V CG
Sbjct: 468 EREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQ----RVLCG 510
Score = 113 (44.8 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITHIS 132
G + +T +I + S G G G V+ + P+ ++ F +G TI +S
Sbjct: 348 GRTQKMGVTKSGRLITWEAPSVGSGEPTLPG---AVEQMQPQFISRFLEGQSGVTIKSVS 404
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G + ++D G + T G G+ G LGHG++ + P V + + + Q++CG H L
Sbjct: 405 CGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLA 464
Query: 193 LLKD 196
+ +
Sbjct: 465 VTNE 468
Score = 99 (39.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 37/119 (31%), Positives = 50/119 (42%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+G H + +T G+ G + HG L R SS P +VS L G+ + A G
Sbjct: 575 IGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPY-----QVSGLQGITMA--ACGD 627
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
+ + + TWG G G+LG I PK V L DE + T V C G T
Sbjct: 628 AFTLAIGAEGEVYTWGKGARGRLGRKEEDFGI-PKPVQL-DE-SHAFTVTSVACCHGNT 683
Score = 87 (35.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 30/119 (25%), Positives = 46/119 (38%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHS 348
H ++ G+ LG +P + + L + + L+ K++ I G HS
Sbjct: 521 HQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHS 580
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
VTE T+G +HGQLG C H + + + CG FT AI
Sbjct: 581 VAVTEKGQCFTFGSNQHGQLG----CS--HRRSSRVPYQVSGLQGITMAACGDAFTLAI 633
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 72/251 (28%), Positives = 107/251 (42%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX------------XXXXXXXACGGAH 78
+ V KVW G D QLG R + +CG AH
Sbjct: 123 KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAH 182
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISA 133
L LT V FS G S GQ G + D +Y + + FDG + +
Sbjct: 183 SLVLTDREGV-----FSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQ---VVQVVC 234
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLV 192
G +HS F++D G +++CG G GQ G G Y S+P K+ V Q+A L
Sbjct: 235 GQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLA 294
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALS 251
L D G V+G+G+ + QL D + V++P+ + + ++ ++ G A L+
Sbjct: 295 LSAD--GG-VFGWGNSEYLQLASVTDSTQ-VNVPRC-LPFSGVGKVKQVACGGTGCAVLN 349
Query: 252 AEGHLYTWGRG 262
AEGH++ WG G
Sbjct: 350 AEGHVFVWGYG 360
Score = 196 (74.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 84/296 (28%), Positives = 122/296 (41%)
Query: 113 LYPKPVTF-FDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSH 166
L P PV D + T + +S G HS ++D +F+ G+ + GQ G + S
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSE 215
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S V + V Q+ CG HSL L +VY G G GQ G+ I S P
Sbjct: 216 SHKVHRMQDFDGQVVQVVCGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITST--P 270
Query: 227 QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD---VN---CXXXX 275
G L + +V ++ GD ALSA+G ++ WG S +D VN C
Sbjct: 271 SKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFS 330
Query: 276 XXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRPLSV--ALEKVSN 332
G VL +G V + G +G+L P+ + + P + L ++
Sbjct: 331 GVGKVKQVA-CGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTE 386
Query: 333 LDG-VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ V+V QI G H A +T + WG G LG+G DQ P V + E
Sbjct: 387 FNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
Score = 41 (19.5 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 92 KVFSWGRGSSGQLG 105
+VF WG SG LG
Sbjct: 57 RVFVWGFSFSGALG 70
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 204 (76.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 68/243 (27%), Positives = 107/243 (44%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L+D ACG +HVLAL++ ++F+
Sbjct: 418 IMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTER-----ELFA 472
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G CG F
Sbjct: 473 WGRGDGGRLGLGTRESHSCPQQVPMPPGQE--AQRVICGIDSSVILTVPGQALACGSNRF 530
Query: 156 GQLG--H---GDYRS-HSSPVKVSSFV--------NKNVHQIACGMRHSLVLLK--DCLG 199
+LG H G+ + H + +F + + + G HS + DC
Sbjct: 531 NKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDC-- 588
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Y FGS + GQLG + R+ QV GL I+I ++ + A+ AEG +Y+W
Sbjct: 589 ---YTFGSNQHGQLGTNARRVSRAPC-QVQ-GLQGIKIAMVACGDAFTVAIGAEGEVYSW 643
Query: 260 GRG 262
G+G
Sbjct: 644 GKG 646
Score = 181 (68.8 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 87/337 (25%), Positives = 133/337 (39%)
Query: 91 GKVFSWGRGSSGQLGHGEM----VDALYPKPVT-FFDGHR-YTITHISAGWNHSGFVSDS 144
G++ W G G G + V+ P+ V+ F +G TI H++ G + ++D
Sbjct: 357 GRLILWEAPPLGA-GGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDR 415
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G + T G G+ G LGHG S P V + + + Q+ACG H L L + +++
Sbjct: 416 GIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTE---RELFA 472
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-F 263
+G G G+LG+ S S PQ E + D S L+ G G F
Sbjct: 473 WGRGDGGRLGLGTRE--SHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRF 530
Query: 264 NSTS-DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLM---LGGSHH----------- 308
N D L + + D E L+ LG +H
Sbjct: 531 NKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYT 590
Query: 309 -GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G + ++ R +S A +V L G+K+ +A G + + + +WG G G+
Sbjct: 591 FGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGR 650
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
LG + D P+ V L DE Q T V C G T
Sbjct: 651 LGRRDE-DAALPRPVQL-DETQPY-TVTSVSCCHGNT 684
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITH 130
A G +T +I + G G G L G V+ P+ V+ F +G TI H
Sbjct: 344 AAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGA-VEQQQPQFVSRFLEGQSGVTIKH 401
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++ G + ++D G + T G G+ G LGHG S P V + + + Q+ACG H
Sbjct: 402 VACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHV 461
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGV 215
L L + +++ +G G G+LG+
Sbjct: 462 LALSTE---RELFAWGRGDGGRLGL 483
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 75/302 (24%), Positives = 114/302 (37%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACG 186
+ ++AG V+ SG L G G G + + FV++ + Q
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGA-GGGALLPGAVEQQQPQFVSRFLEGQSGVT 398
Query: 187 MRHSLV--LLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
++H L CL ++ + FGSG G LG + +S P + L E+V ++
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLG--HGGLNDISQPTIVEALLGYEMVQVAC 456
Query: 243 NGDRSAALSAEGHLYTWGRG------FNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVL 294
ALS E L+ WGRG + +C + G + ++L
Sbjct: 457 GASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVIL 516
Query: 295 TGDGEVLMLGGSHHGMLS-DPERVSSTRPLSVALEKVSN--------LDGVKVIQIAAGA 345
T G+ L G + L D + L +E+ N LD ++ + G
Sbjct: 517 TVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGT 576
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTY 405
HSA VT + T+G +HGQLG P V G Q + V CG FT
Sbjct: 577 AHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ-G--LQGIKIAM-VACGDAFTV 632
Query: 406 AI 407
AI
Sbjct: 633 AI 634
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/187 (24%), Positives = 74/187 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
++++WG G G+LG G CG + LT P + G
Sbjct: 469 ELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSN 528
Query: 93 VFSWGRGSSGQLG-----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
F+ LG H ++ +AL P+ + + + G HS V+ SG
Sbjct: 529 RFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDC 588
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG R +P +V + +ACG ++ + + +VY +G
Sbjct: 589 YTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAE---GEVYSWGK 645
Query: 208 GKRGQLG 214
G RG+LG
Sbjct: 646 GARGRLG 652
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 140 (54.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITH 130
A GG H + + G+VFS G GQ G GE + + P G+ +
Sbjct: 49 AGGGNHTMVILD-----NGEVFSCGSNEFGQCGLPRGESLGVFHKVP-----GNDWL--D 96
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
IS GW S V SG ++ CG G G+LG G S + S+ V+ +I M+H+
Sbjct: 97 ISCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELI-YSTTVD-GFKEIKSCMQHT 154
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
++ N + G+G+ ++GQLG ++D+I
Sbjct: 155 IIQTT----NGLVGWGNSRKGQLGETEDKI 180
Score = 112 (44.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
I+ G NH+ + D+G +F+CG FGQ G R S V + I+CG S
Sbjct: 48 IAGGGNHTMVILDNGEVFSCGSNEFGQCGLP--RGESLGV-FHKVPGNDWLDISCGWEFS 104
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI-GLHDIE 236
+++ + +VY G G +G+LG+ K+ S + T+ G +I+
Sbjct: 105 ILVKRS---GEVYVCGRGLKGELGLGKETPESELIYSTTVDGFKEIK 148
Score = 101 (40.6 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
N V V + A G+EH V ++N + WGW EHG G N D++
Sbjct: 261 NNSSVAVEEYAIGSEHGLVTSDN-IVYAWGWSEHGNCGTSNASDKV 305
Score = 54 (24.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/86 (25%), Positives = 33/86 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+ G G G+LG G+ E +C H + T+ + ++G
Sbjct: 112 EVYVCGRGLKGELGLGKETPESELIYSTTVDGFKEIK-SCM-QHTIIQTT-NGLVG---- 164
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF 120
WG GQLG E PK + F
Sbjct: 165 -WGNSRKGQLGETEDKIMWTPKTLRF 189
Score = 52 (23.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 23/68 (33%), Positives = 28/68 (41%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+G H LV T D V G S HG +S + L K+ KV+ I AG
Sbjct: 272 IGSEHGLV-TSDNIVYAWGWSEHGNCGTSN--ASDKVTFDYLNKLYT-GSAKVVLIGAGC 327
Query: 346 EHSAVVTE 353
S VV E
Sbjct: 328 ATSWVVVE 335
Score = 42 (19.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ N+ V ++AA +++E + ++G H QL N+
Sbjct: 220 IKNIPESTVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNNS 263
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 140 (54.3 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 46/150 (30%), Positives = 72/150 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITH 130
A GG H + + G+VFS G GQ G GE + + P G+ +
Sbjct: 49 AGGGNHTMVILD-----NGEVFSCGSNEFGQCGLPRGESLGVFHKVP-----GNDWL--D 96
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
IS GW S V SG ++ CG G G+LG G S + S+ V+ +I M+H+
Sbjct: 97 ISCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELI-YSTTVD-GFKEIKSCMQHT 154
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
++ N + G+G+ ++GQLG ++D+I
Sbjct: 155 IIQTT----NGLVGWGNSRKGQLGETEDKI 180
Score = 112 (44.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
I+ G NH+ + D+G +F+CG FGQ G R S V + I+CG S
Sbjct: 48 IAGGGNHTMVILDNGEVFSCGSNEFGQCGLP--RGESLGV-FHKVPGNDWLDISCGWEFS 104
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI-GLHDIE 236
+++ + +VY G G +G+LG+ K+ S + T+ G +I+
Sbjct: 105 ILVKRS---GEVYVCGRGLKGELGLGKETPESELIYSTTVDGFKEIK 148
Score = 101 (40.6 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
N V V + A G+EH V ++N + WGW EHG G N D++
Sbjct: 261 NNSSVAVEEYAIGSEHGLVTSDN-IVYAWGWSEHGNCGTSNASDKV 305
Score = 54 (24.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 22/86 (25%), Positives = 33/86 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+ G G G+LG G+ E +C H + T+ + ++G
Sbjct: 112 EVYVCGRGLKGELGLGKETPESELIYSTTVDGFKEIK-SCM-QHTIIQTT-NGLVG---- 164
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF 120
WG GQLG E PK + F
Sbjct: 165 -WGNSRKGQLGETEDKIMWTPKTLRF 189
Score = 52 (23.4 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 23/68 (33%), Positives = 28/68 (41%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+G H LV T D V G S HG +S + L K+ KV+ I AG
Sbjct: 272 IGSEHGLV-TSDNIVYAWGWSEHGNCGTSN--ASDKVTFDYLNKLYT-GSAKVVLIGAGC 327
Query: 346 EHSAVVTE 353
S VV E
Sbjct: 328 ATSWVVVE 335
Score = 42 (19.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ N+ V ++AA +++E + ++G H QL N+
Sbjct: 220 IKNIPESTVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNNS 263
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 164 (62.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 53/183 (28%), Positives = 80/183 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
KV S+G D G +++E +CG H+LAL+ V +
Sbjct: 338 KVLSFGGSNDNNFLGGVINNELQMMTDQMNSIKIIQI-SCGSNHILALSDQYHV-----Y 391
Query: 95 SWGRGSSGQLGHGEMVDALY--------PKPVTFFDGHRYTITHISAGWNHS-GFVSDSG 145
SWG G+LGHGE + PK + T+ +S+G++H DSG
Sbjct: 392 SWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSG 451
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGNQVY 203
L T G G+ GQLG G SP ++ ++KN + QI CG +S + + ++Y
Sbjct: 452 IL-TWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLE--KRELY 508
Query: 204 GFG 206
FG
Sbjct: 509 QFG 511
Score = 132 (51.5 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS--STRPLSV-ALEKVSNLD--GVKVIQI 341
G NH+L L+ V G + HG L E S S P + + +K+ +L GV VI +
Sbjct: 377 GSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISV 436
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
++G H +T + I+TWG G GQLG G
Sbjct: 437 SSGYSHCMALTLDSGILTWGKGSDGQLGTG 466
Score = 125 (49.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 37/134 (27%), Positives = 66/134 (49%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++F WGRG + G +++ P+ + ++ I +S G H+ +SDSG L++ G
Sbjct: 11 QIFYWGRGVNQ--GDKHIIE-----PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWG 63
Query: 152 DG-TFGQLGHGDYRS-HSSPVKVSSFV------NKNVHQIACGMRHSLVLLKDCLGNQVY 203
+ GQLGHGD ++ + P + F +V Q++ G+ + VL +Y
Sbjct: 64 SSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQ---GSIY 120
Query: 204 GFGSGKRGQLGVSK 217
+GS GQL + +
Sbjct: 121 NWGSNIEGQLALGQ 134
Score = 106 (42.4 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRG-SSGQLGHGEMVDAL-YPKPVTFFDGHRY---- 126
+CG H L L+ G ++SWG SSGQLGHG+ + PK + F +
Sbjct: 44 SCGSTHTLVLSD-----SGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGD 98
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
++ +S G + + ++D G ++ G GQL G
Sbjct: 99 SVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALG 133
Score = 104 (41.7 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR-GQLGV--SKDRI-RSVS 224
P++V KN+ Q++CG H+LVL D +Y +GS GQLG SK++ + +
Sbjct: 29 PIEVPELNKKNIVQLSCGSTHTLVL-SD--SGDLYSWGSSNSSGQLGHGDSKNQYGKPKN 85
Query: 225 LPQVTI--GLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ + ++ L ++ +S D + L+ +G +Y WG
Sbjct: 86 IKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWG 123
Score = 102 (41.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 33/97 (34%), Positives = 46/97 (47%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DY-------RSHSSPVKVSSFVNKN 179
I IS G NH +SD +++ G G+LGHG DY R +SP K+ S K
Sbjct: 371 IIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKG 430
Query: 180 VH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
V ++ G H + L D + + +G G GQLG
Sbjct: 431 VTVISVSSGYSHCMALTLD---SGILTWGKGSDGQLG 464
Score = 93 (37.8 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD------RIRSVSLPQVTIGLHD- 234
QI+CG H L L VY +GS + G+LG +D R ++ P+ L +
Sbjct: 373 QISCGSNHILALSDQY---HVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEK 429
Query: 235 -IEIVGISANGDRSAALSAEGHLYTWGRG 262
+ ++ +S+ AL+ + + TWG+G
Sbjct: 430 GVTVISVSSGYSHCMALTLDSGILTWGKG 458
Score = 93 (37.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 19/80 (23%), Positives = 46/80 (57%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI--HPKVVNLGDEFQN 390
++ +K+IQI+ G+ H +++ + +WG EHG+LG G + +P+ +N + ++
Sbjct: 366 MNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKS 425
Query: 391 -RDTQLEVFC-GSGFTYAIS 408
++ + V SG+++ ++
Sbjct: 426 LQEKGVTVISVSSGYSHCMA 445
Score = 79 (32.9 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G++H + LT D +L G G L R P + ++V + + K++QI G
Sbjct: 439 GYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEI--KRVIDKNE-KIVQICCGYF 495
Query: 347 HSAVVT-ENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLE 396
+S +T E R + +GW + LG + D + P K + L + +N++ E
Sbjct: 496 NSFFITLEKRELYQFGWS----IPLGKSDDILIPTKFIWL-NPLKNKNNNNE 542
Score = 76 (31.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
E +N + ++ QI++G H+ ++ EN ++ G GE GQLG+
Sbjct: 556 EDENNDNSNRIKQISSGYSHTLILNENGECLSIGQGEFGQLGI 598
Score = 66 (28.3 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
L +T ++ I+I+ IS + ALS + H+Y+WG
Sbjct: 359 LQMMTDQMNSIKIIQISCGSNHILALSDQYHVYSWG 394
Score = 64 (27.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDP-ERVSSTRPLSVALEKV-SNLDGVKVIQIAAG 344
G++H L+L +GE L +G G L P + S + V V L V + G
Sbjct: 572 GYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFVESVQCG 631
Query: 345 AEHSAVVTENR 355
HS + NR
Sbjct: 632 RWHSVAIVSNR 642
Score = 61 (26.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 177 NKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
N N + QI+ G H+L+L ++ + G G+ GQLG+ D
Sbjct: 562 NSNRIKQISSGYSHTLILNEN---GECLSIGQGEFGQLGIPLD 601
Score = 59 (25.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 36 VWSWGAG-TDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSP---SSVIG- 90
++SWG+ + GQLG G D A G V+ +++ + V+
Sbjct: 59 LYSWGSSNSSGQLGHG---DSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTD 115
Query: 91 -GKVFSWGRGSSGQLGHGEMVD 111
G +++WG GQL G+ V+
Sbjct: 116 QGSIYNWGSNIEGQLALGQPVN 137
Score = 59 (25.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 201 QVYGFGSG-KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
Q++ +G G +G K I + +P+ L+ IV +S + LS G LY+W
Sbjct: 11 QIFYWGRGVNQGD----KHIIEPIEVPE----LNKKNIVQLSCGSTHTLVLSDSGDLYSW 62
Query: 260 GRGFNSTSDV 269
G NS+ +
Sbjct: 63 GSS-NSSGQL 71
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 197 (74.4 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 86/297 (28%), Positives = 123/297 (41%)
Query: 113 LYPKPVTF-FDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSH 166
L P PV D + T + +S G HS ++D +F+ G+ GQ G + S
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSE 215
Query: 167 SSPV-KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
S V ++ F + V Q+ CG HSL L +VY G G GQ G+ I S
Sbjct: 216 SHKVHRMQDFEGQVV-QVVCGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITST-- 269
Query: 226 PQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD---VN---CXXX 274
P G L + +V ++ GD ALSA+G ++ WG S +D VN C
Sbjct: 270 PSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPF 329
Query: 275 XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR-PLSV--ALEKVS 331
G +L +G V + G +G+L +S T P + L ++
Sbjct: 330 SGVGKVKQVA-CGGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLT 385
Query: 332 NLDG-VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ VKV QI G H A +T + WG G LG+G DQ P V + E
Sbjct: 386 EFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE 442
Score = 189 (71.6 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 68/248 (27%), Positives = 103/248 (41%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXX------------XXXXXXXACGGAH 78
+ V KVW G D QLG R + +CG AH
Sbjct: 123 KDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAH 182
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP--VTFFDGHRYTITHISAGWN 136
L LT V FS G + GQ G + D +Y + V + + G +
Sbjct: 183 SLVLTDREGV-----FSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQD 237
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLK 195
HS F++D G +++CG G GQ G G Y S+P K+ V Q+A L L
Sbjct: 238 HSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSA 297
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALSAEG 254
D G V+G+G+ + QL D + V++P+ + + ++ ++ G A L+ EG
Sbjct: 298 D--GG-VFGWGNSEYLQLASVTDSTQ-VNVPRC-LPFSGVGKVKQVACGGTGCAILNEEG 352
Query: 255 HLYTWGRG 262
H++ WG G
Sbjct: 353 HVFVWGYG 360
Score = 41 (19.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 92 KVFSWGRGSSGQLG 105
+VF WG SG LG
Sbjct: 57 RVFVWGFSFSGALG 70
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 199 (75.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 63/230 (27%), Positives = 105/230 (45%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXX-XXXXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
+V++WG QLG G + ACG H +AL+ G +
Sbjct: 95 EVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALS-----FDGDL 149
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG + GQ+G G + P+ V+ + + I+ G S V ++G ++ G
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVG-IACGQTSSMAVVNNGEVYGWGYN 208
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G+ + +P +V++ + QIACG H+L L + L +Y +G+ GQL
Sbjct: 209 GNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGL---LYAWGANTYGQL 265
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
G +S L + I + +V I+A + SAA + G +Y WG+
Sbjct: 266 GTGN---KSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ 312
Score = 197 (74.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 64/228 (28%), Positives = 101/228 (44%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG-GAHVLALTSPSSVIGGKV 93
+V+ +G LGTG + G G HVL T G+V
Sbjct: 42 EVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTED-----GEV 96
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG QLG+G + P V + + ++ G +HS +S G L+ G
Sbjct: 97 YAWGHNGYSQLGNGATNQGVTPVQVCT-NLLLKKVIEVACGSHHSMALSFDGDLYAWGYN 155
Query: 154 TFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQ+G G + +P +VS+ + +K V IACG S+ ++ + +VYG+G GQ
Sbjct: 156 NCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNN---GEVYGWGYNGNGQ 212
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG+ + + P LH + I+ I+ + AL+ EG LY WG
Sbjct: 213 LGLGNNGNQLT--PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG 258
Score = 189 (71.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 67/262 (25%), Positives = 109/262 (41%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-HSLVLL 194
N + + + + +F G LG GD +S P K+ + K + ++ G H L+
Sbjct: 32 NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT 91
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D +VY +G QLG + V+ QV L +++ ++ S ALS +G
Sbjct: 92 ED---GEVYAWGHNGYSQLGNGATN-QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 147
Query: 255 HLYTWGR------GFNSTSDVNCXXXXXX---XXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
LY WG G ST++ G + + +GEV G
Sbjct: 148 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGY 207
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ +G L + P VA L GV ++QIA G H+ +T+ + WG +
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAA-----LHGVCILQIACGYAHTLALTDEGLLYAWGANTY 262
Query: 366 GQLGLGNTCDQIHPKVVNLGDE 387
GQLG GN +Q+ P + + E
Sbjct: 263 GQLGTGNKSNQLSPLQIMMEKE 284
Score = 170 (64.9 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 52/178 (29%), Positives = 81/178 (45%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+++WG GQ+G+G ++ ACG +A+ + G+V+
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVN-----NGEVY 203
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG +GQLG G + L P V H I I+ G+ H+ ++D G L+ G T
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRVAAL--HGVCILQIACGYAHTLALTDEGLLYAWGANT 261
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG G+ + SP+++ + V AC H+ K G QVY +G RGQ
Sbjct: 262 YGQLGTGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAA-KTQSG-QVYMWGQC-RGQ 316
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 79/313 (25%), Positives = 128/313 (40%)
Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSP 169
P+ + F G + + AG H V+ L+T G GQLGHGD S+ P
Sbjct: 341 PQKLDVFKGG-WRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V K+V +++CG ++ + + Q+Y FGS G LGV++ V P +
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDE---GQLYSFGSDYYGCLGVNQSAGSEVLEPLLV 456
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCXXXXXXXXXXXX 283
+ + +S AL+ +Y+WG G +S DV
Sbjct: 457 DFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCI 516
Query: 284 XXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR--------PLSVALEKVSNL 333
+ G + +LT G+VL G + H L + + P + +L L
Sbjct: 517 VNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQL 576
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 393
K+ I+ G H+A + E ++T+G + GQLG+G+ + H + LG +
Sbjct: 577 SFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDY--RKHLGINLLGGPLGGKQV 634
Query: 394 QLEVFCGSGFTYA 406
+ V CG FT A
Sbjct: 635 -IRVSCGDEFTTA 646
Score = 176 (67.0 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 55/191 (28%), Positives = 85/191 (44%)
Query: 74 CGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
C G AH +T + G GQLGHG+ PK V G ++ +S
Sbjct: 357 CAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGK--SVQKVS 414
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHS 190
G + + ++D G L++ G +G LG P+ V F+N+ V Q++CG H
Sbjct: 415 CGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHI 474
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+ L + VY +G G+ G+LG+ S+D + S +V GL IV + D S
Sbjct: 475 MALTRS---KSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLC---IVNVCCGSDGSFL 528
Query: 250 LSAEGHLYTWG 260
L+ G + G
Sbjct: 529 LTLTGKVLACG 539
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/205 (27%), Positives = 94/205 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG +H++ALT SV +SWG G G+LG D P+ V G I ++
Sbjct: 468 SCGDSHIMALTRSKSV-----YSWGCGEYGRLGLDSEDDVYSPQKVEVQRG--LCIVNVC 520
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS----HSS----PVKVSSFVNKN----- 179
G + S ++ +G + CG +LG Y + H + P S + K
Sbjct: 521 CGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYK 580
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
+ I+ G H+ + D G ++ FGS K GQLGV R + + + + L +++
Sbjct: 581 IRSISPGRTHTAAI--DERG-RLLTFGSNKCGQLGVGDYR-KHLGINLLGGPLGGKQVIR 636
Query: 240 ISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A +A+ H++ WG G N
Sbjct: 637 VSCGDEFTTAATADNHIFAWGNGGN 661
Score = 149 (57.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 49/188 (26%), Positives = 75/188 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG--GAHVLALTSPSSVIG--- 90
V+SWG G G+LG D CG G+ +L LT G
Sbjct: 483 VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNE 542
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFT 149
+ ++G + H + Y +T Y I IS G H+ + + G L T
Sbjct: 543 HNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLT 602
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G GQLG GDYR H + + K V +++CG + D N ++ +G+G
Sbjct: 603 FGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATAD---NHIFAWGNG 659
Query: 209 KRGQLGVS 216
G+L ++
Sbjct: 660 GNGRLAMT 667
Score = 99 (39.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 54/234 (23%), Positives = 92/234 (39%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGRG 99
G+ GQLG G +CG + +T G+++S+G
Sbjct: 381 GSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDE-----GQLYSFGSD 435
Query: 100 SSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G LG + + L P V FF + +S G +H ++ S +++ G G +G+
Sbjct: 436 YYGCLGVNQSAGSEVLEPLLVDFFLNE--PVDQVSCGDSHIMALTRSKSVYSWGCGEYGR 493
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG SP KV + + CG S +L L +V G + +LG+++
Sbjct: 494 LGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLT---LTGKVLACGLNEHNKLGLNQ 550
Query: 218 DRIRSVS------LP---QVTIG--LHDIEIVGISANGDRSAALSAEGHLYTWG 260
++ +P +T+ L +I IS +AA+ G L T+G
Sbjct: 551 YTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFG 604
Score = 73 (30.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVALEKVSNLDGVKVIQIAAGA 345
G H + G +L G + G L V R L + L L G +VI+++ G
Sbjct: 587 GRTHTAAIDERGRLLTFGSNKCGQLG----VGDYRKHLGINLLG-GPLGGKQVIRVSCGD 641
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGL 370
E + T + I WG G +G+L +
Sbjct: 642 EFTTAATADNHIFAWGNGGNGRLAM 666
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 76/300 (25%), Positives = 122/300 (40%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVT----FFDG--HR 125
+CG AHV+AL+ G + +WG GQLG G + L P+ + F D
Sbjct: 172 SCGTAHVVALSEE-----GLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPEL 226
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQ 182
I +S G H+ +SD+G ++T G G+ GQLGH +S P +V ++ +
Sbjct: 227 VKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKE 286
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR--IRSVS------LPQVTIGLHD 234
+ACG H+ L L +Y +G G+ GQLG+ SVS L V + +
Sbjct: 287 VACGGVHTCAL---SLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIP 343
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVL 294
++ ++ + EG + WG +NS + W
Sbjct: 344 TDVRLVACGHSHTLVYMREGRICGWG--YNSYGQA---ANEKSSYAWYPSPVDW-----C 393
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE-KVSNLDGVKVIQIAAGAEHSAVVTE 353
G L GG H +L+D + +A +SN ++ + G+E A + E
Sbjct: 394 VGQVRKLAAGGGHSAVLTDAFSLKELCEFQLADSVNLSNASEIQDVAFRMGSEALARLCE 453
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 87/344 (25%), Positives = 134/344 (38%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG----G 91
+++WGA GQLG G +CG A+ P G
Sbjct: 82 LFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTS 141
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++ WG+ L + +P I +S G H +S+ G L G
Sbjct: 142 RLWVWGQNQGSNLPR--LFSGAFPATTA--------IRQVSCGTAHVVALSEEGLLQAWG 191
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSS---FVNK-----NVHQIACGMRHSLVLLKDCLGNQV 202
GQLG G +P +++ F+++ + Q++CG H+ L D +V
Sbjct: 192 YNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAAL-SDA--GEV 248
Query: 203 YGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
Y +G G GQLG VS +P+ +GL + + ++ G + ALS EG LY WG
Sbjct: 249 YTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGG 308
Query: 262 GFNSTSDVNCXXXXXXXXXXXXXXLGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
G + L N VLV+ D ++ G SH + R+
Sbjct: 309 GQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGW 368
Query: 321 RPLS---VALEKVSN------LDGV--KVIQIAAGAEHSAVVTE 353
S A EK S +D +V ++AAG HSAV+T+
Sbjct: 369 GYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGHSAVLTD 412
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 71/263 (26%), Positives = 100/263 (38%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
IS G H+ V+ G LF G +GQLG G P KV ++ V ++CG +
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 191 LVLLKDCLGNQVYGFGSGKR----GQ-LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
+ + + G S R GQ G + R+ S + P T I +S
Sbjct: 126 AAIAEP---RENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTA------IRQVSCGTA 176
Query: 246 RSAALSAEGHLYTWG-------------RGFNSTSDVNCXXXXXXXXXXXXXXL----GW 288
ALS EG L WG G + +N + G
Sbjct: 177 HVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGE 236
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H L+ GEV G G L S + L +V LDGV + ++A G H+
Sbjct: 237 YHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIP--RRVVGLDGVSMKEVACGGVHT 294
Query: 349 AVVTENRAIMTWGWGEHGQLGLG 371
++ A+ WG G+ GQLGLG
Sbjct: 295 CALSLEGALYAWGGGQAGQLGLG 317
Score = 134 (52.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 54/202 (26%), Positives = 91/202 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG H A+ S G +F+WG GQLG G V +PK V + +S
Sbjct: 67 SCGREHTAAVASD-----GSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSE--FVKFVS 119
Query: 133 AGWNHSGFVSD----SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGM 187
G + +++ G L T +GQ G S+ + +F + Q++CG
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQ-NQG---SNLPRLFSGAFPATTAIRQVSCGT 175
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHD-----IEIVGI 240
H + L ++ L Q +G+ ++GQLG V+ + +++ + D ++I+ +
Sbjct: 176 AHVVALSEEGL-LQAWGYN--EQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQL 232
Query: 241 SANGDRSAALSAEGHLYTWGRG 262
S +AALS G +YTWG G
Sbjct: 233 SCGEYHTAALSDAGEVYTWGLG 254
Score = 129 (50.5 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 57/195 (29%), Positives = 77/195 (39%)
Query: 79 VLALTSPSSVIGGK--VFSWGRGSSGQLGHGEMVDAL-YPK--PVTFFD---GHRYTITH 130
++ +PS I K ++ WG SGQ G E L PK P F G
Sbjct: 6 IIGEVAPSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLD 65
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
IS G H+ V+ G LF G +GQLG G P KV ++ V ++CG +
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 191 LVLLKDCLGNQVYGFGSGKR----GQ-LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
+ + + G S R GQ G + R+ S + P T I +S
Sbjct: 126 AAIAEP---RENDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTA------IRQVSCGTA 176
Query: 246 RSAALSAEGHLYTWG 260
ALS EG L WG
Sbjct: 177 HVVALSEEGLLQAWG 191
Score = 114 (45.2 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQL--- 395
Q++ G H ++E + WG+ E GQLG G TC+ + P+V+N +F + +L
Sbjct: 170 QVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKI 229
Query: 396 -EVFCGSGFTYAIS 408
++ CG T A+S
Sbjct: 230 MQLSCGEYHTAALS 243
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 170 (64.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 59/221 (26%), Positives = 93/221 (42%)
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
VLL C QV+ +G+G+ GQLG + + P++ L + + ++A G S LS
Sbjct: 173 VLLL-CAAGQVFSWGAGRHGQLG--HGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLS 229
Query: 252 AEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGML 311
G +Y WG +N + + L DG L + G
Sbjct: 230 ETGDIYIWG--WNESGQLALPTRSGTENKAER-----EEATELNEDGLKEELAVADAGA- 281
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
P + +P L+ D V + G+ H+AVVT + TWGWG++GQLG
Sbjct: 282 --PAHFIAIQPFPALLDLPLGSDAVMA---SCGSRHTAVVTRTGELYTWGWGKYGQLGHK 336
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 409
++ P V + F R ++ V CG + + YA+ R
Sbjct: 337 DSTSLDRPCCV---EYFVERQLEVRAVTCGPWNTYVYAMER 374
Score = 133 (51.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 32/85 (37%), Positives = 42/85 (49%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG HVL+L G+V G HG L + P LE L G+++ ++AAG
Sbjct: 168 LGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPR--LLEA---LQGLRMAKVAAGG 222
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGL 370
HS ++E I WGW E GQL L
Sbjct: 223 WHSVCLSETGDIYIWGWNESGQLAL 247
Score = 124 (48.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G HVL L + G+VFSWG G GQLGHG + L P+ + G R + ++AG
Sbjct: 169 GAEHVLLLCA-----AGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLR--MAKVAAG 221
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS +S++G ++ G GQL
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQL 245
Score = 99 (39.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 25/70 (35%), Positives = 31/70 (44%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWGAG GQLG G L E A GG H + L+ G ++
Sbjct: 181 QVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSET-----GDIY 235
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 236 IWGWNESGQL 245
Score = 98 (39.6 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
S G H+ V+ +G L+T G G +GQLGH D S P V FV + V + CG
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 63 (27.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 91 GKVFSWGRGSSGQ-LGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
G F +G GQ LG G ++Y P+P+ D I +SAGW+++ V+ G
Sbjct: 7 GAWFGFGFCGFGQALGSGNSHHSVYSPEPLHASDD----ICQVSAGWSYTALVTRGG 59
Score = 63 (27.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
+CG RH+ V+ + ++Y +G GK GQLG KD
Sbjct: 307 SCGSRHTAVVTRT---GELYTWGWGKYGQLG-HKD 337
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/85 (38%), Positives = 40/85 (47%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG H L+L G+V G HG L + P LE L G+ V ++AAG
Sbjct: 102 LGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPR--LLEA---LQGLPVAEVAAGG 156
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGL 370
HS V+E I WGW E GQL L
Sbjct: 157 WHSVCVSETGDIYIWGWNESGQLAL 181
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 49/197 (24%), Positives = 80/197 (40%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G H+ + ++G +F+ G G GQLGHG + P + + V ++A G HS
Sbjct: 100 LELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHS 159
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSA 248
+ + + G+ +Y +G + GQL + RS++ TI E G++ +G R
Sbjct: 160 VCVSET--GD-IYIWGWNESGQLALPS---RSLAEDTKTIPR---EASGLNEDGFEVRRT 210
Query: 249 ALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHH 308
A +G F + G H V+TG GE+ G +
Sbjct: 211 AKGEDGA----PAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKY 266
Query: 309 GMLSDPERVSSTRPLSV 325
G L + S RP V
Sbjct: 267 GQLGHKDTTSLDRPCRV 283
Score = 119 (46.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
G V++ + G+ H+AVVT + TWGWG++GQLG +T P V + F ++ Q
Sbjct: 236 GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRV---EYFVDKQLQ 292
Query: 395 LE-VFCG--SGFTYAISR 409
+ V CG + + YA+ +
Sbjct: 293 VRAVSCGPWNTYVYAVEK 310
Score = 117 (46.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L G+VFSWG+G GQLGHG + P+ + G + ++AG
Sbjct: 103 GAEHALLLDE-----AGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQG--LPVAEVAAG 155
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS VS++G ++ G GQL
Sbjct: 156 GWHSVCVSETGDIYIWGWNESGQL 179
Score = 112 (44.5 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 31/95 (32%), Positives = 44/95 (46%)
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F R + G+ G A+ P P + S G H+ V+ +G L+T G G
Sbjct: 205 FEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWG 264
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
+GQLGH D S P +V FV+K V ++CG
Sbjct: 265 KYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCG 299
Score = 89 (36.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L E A GG H + ++ G ++
Sbjct: 115 QVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSET-----GDIY 169
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 170 IWGWNESGQL 179
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 195 (73.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 78/298 (26%), Positives = 123/298 (41%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGD---GT--FGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ AG H V+ L+T + GT GQLGHGD S+ P V K +HQ++C
Sbjct: 372 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 431
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANG 244
G ++ + + Q+Y FGS G +GV K V P Q+ L + + +S
Sbjct: 432 GDDFTVCVTDE---GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCGD 487
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTG 296
+ L+ +Y+WG G +S D + G + +LT
Sbjct: 488 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 547
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTR--------PLSVALEKVSNLDGVKVIQIAAGAEHS 348
G+VL G + L + +S P + + L K+ IA G H+
Sbjct: 548 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 607
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
A + E ++T+G + GQLG+GN ++ + LG + + V CG FT A
Sbjct: 608 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL--LGGPLGGKQV-IRVSCGDEFTIA 662
Score = 156 (60.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 51/200 (25%), Positives = 83/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 375 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIHQVSCG 432
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + V+D G L+ G +G +G P++++ F++ V Q++CG H +V
Sbjct: 433 DDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVV 492
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 493 LTRN---KEVYSWGCGEYGRLGLDSEE--DYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 547
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 548 SGKVLACGLNEFNKLGLNQC 567
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/206 (26%), Positives = 88/206 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV+ LT +V+SWG G G+LG D P+ V I +
Sbjct: 484 SCGDNHVVVLTRNK-----EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQ 536
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKN----- 179
G + + ++ SG + CG F +LG S H P S + K
Sbjct: 537 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 596
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
+ IA G H+ + D G ++ FG K GQLGV + R ++L +G +++
Sbjct: 597 IRTIAPGKTHTAAI--DERG-RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLG--GKQVI 651
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 652 RVSCGDEFTIAATDDNHIFAWGNGGN 677
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 46/189 (24%), Positives = 74/189 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
+V+SWG G G+LG D CG LT V+ G
Sbjct: 498 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 557
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + SG + H + Y T Y I I+ G H+ + + G L
Sbjct: 558 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 617
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG G+Y+ + + K V +++CG ++ D N ++ +G+
Sbjct: 618 TFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 674
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 675 GGNGRLAMT 683
Score = 71 (30.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
L G +VI+++ G E + T++ I WG G +G+L + T
Sbjct: 645 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPT 685
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 195 (73.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 78/298 (26%), Positives = 123/298 (41%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGD---GT--FGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ AG H V+ L+T + GT GQLGHGD S+ P V K +HQ++C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 433
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANG 244
G ++ + + Q+Y FGS G +GV K V P Q+ L + + +S
Sbjct: 434 GDDFTVCVTDE---GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCGD 489
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTG 296
+ L+ +Y+WG G +S D + G + +LT
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTR--------PLSVALEKVSNLDGVKVIQIAAGAEHS 348
G+VL G + L + +S P + + L K+ IA G H+
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
A + E ++T+G + GQLG+GN ++ + LG + + V CG FT A
Sbjct: 610 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL--LGGPLGGKQV-IRVSCGDEFTIA 664
Score = 156 (60.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 51/200 (25%), Positives = 83/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 377 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIHQVSCG 434
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + V+D G L+ G +G +G P++++ F++ V Q++CG H +V
Sbjct: 435 DDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVV 494
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 495 LTRN---KEVYSWGCGEYGRLGLDSEE--DYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 550 SGKVLACGLNEFNKLGLNQC 569
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 55/206 (26%), Positives = 88/206 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV+ LT +V+SWG G G+LG D P+ V I +
Sbjct: 486 SCGDNHVVVLTRNK-----EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQ 538
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKN----- 179
G + + ++ SG + CG F +LG S H P S + K
Sbjct: 539 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 598
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
+ IA G H+ + D G ++ FG K GQLGV + R ++L +G +++
Sbjct: 599 IRTIAPGKTHTAAI--DERG-RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLG--GKQVI 653
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGN 679
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 46/189 (24%), Positives = 74/189 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
+V+SWG G G+LG D CG LT V+ G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + SG + H + Y T Y I I+ G H+ + + G L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG G+Y+ + + K V +++CG ++ D N ++ +G+
Sbjct: 620 TFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 676
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 677 GGNGRLAMT 685
Score = 71 (30.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
L G +VI+++ G E + T++ I WG G +G+L + T
Sbjct: 647 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPT 687
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 97 (39.2 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 337 KVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLG 369
K+ QIA G+EH + E R ++ WGWGEHG G
Sbjct: 301 KMSQIAVGSEHVVAIDEARQSVAAWGWGEHGNCG 334
Score = 91 (37.1 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 201 QVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+VY FG G +G+LG IR + P + E+VG+SA A+ + G +Y W
Sbjct: 135 RVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMGHVVAVLSNGDVYGW 194
Query: 260 GRG 262
G G
Sbjct: 195 GNG 197
Score = 86 (35.3 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYT-----ITHISAGWNHSGFVSDSGC 146
F+ G SGQLG G D PKP F G + ++AG NH+ ++ G
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGE 64
Query: 147 LFTCGDGTFGQLG 159
+++ GD G G
Sbjct: 65 IYSSGDPASGACG 77
Score = 85 (35.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 31/115 (26%), Positives = 49/115 (42%)
Query: 35 KVWSWGAGTDGQLGTG----RLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIG 90
+V+S+G G+ G+LG G R+ AC G HV+A+ S
Sbjct: 135 RVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMG-HVVAVLS-----N 188
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
G V+ WG G GQLG E + P+ + +G + + + G + V + G
Sbjct: 189 GDVYGWGNGRKGQLGAPEGI-ITEPRKI---EGVPFKVAKAACGKEFTCLVGEPG 239
Score = 76 (31.8 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG-AE 346
W ++ VL DG +L G + HG L+ P + ++V E V +D + A G E
Sbjct: 271 WGNIYVLQADGSILSWGRNDHGQLA-PSELPKMSQIAVGSEHVVAIDEARQSVAAWGWGE 329
Query: 347 H 347
H
Sbjct: 330 H 330
Score = 73 (30.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 42/160 (26%), Positives = 66/160 (41%)
Query: 73 ACGGAHVLALTSPSSVIG-GKVFSWGRGSSG-QLGHGEMVDALYPKPVTFFDGH------ 124
A GG H L LT + G S G+ G + + A P+P F H
Sbjct: 50 AAGGNHTLLLTQDGEIYSSGDPAS---GACGLKSATADSAGAGQPRPPVFHKIHVPAEQA 106
Query: 125 -RYTITHISAGWNHSGFVS--DSGC----LFTCGDGTFGQLGHGDY--R-SHSSPVKVSS 174
+ I+A W S + G +++ G G+ G+LG G R + P+
Sbjct: 107 AQSPGRLIAATWEASIITGPDEQGRRNRRVYSFGCGSKGELGQGPLIIRVPFAQPIANFP 166
Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
V ++ M H + +L + VYG+G+G++GQLG
Sbjct: 167 PPETEVVGLSACMGHVVAVLSN---GDVYGWGNGRKGQLG 203
Score = 54 (24.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 26/95 (27%), Positives = 41/95 (43%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
+ P K+ K V + ACG + CL + GSG +G+ K ++S S P
Sbjct: 210 TEPRKIEGVPFK-VAKAACGKEFT------CLVGEP---GSGDILVMGLDKWSVQS-SAP 258
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G D++ A+ L A+G + +WGR
Sbjct: 259 NSVPGWRDLQ-----ASWGNIYVLQADGSILSWGR 288
Score = 51 (23.0 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
SV +++ G + +Q + G + V+ + +I++WG +HGQL
Sbjct: 252 SVQSSAPNSVPGWRDLQASWGNIY--VLQADGSILSWGRNDHGQL 294
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 187 (70.9 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 80/312 (25%), Positives = 132/312 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-----PKPVTFFDGHRYT 127
+ G H LA+TS G++++WGR GQLG ++D+ PK V +
Sbjct: 88 SAGHYHSLAVTS-----SGEIWAWGRNDEGQLGR-IVIDSSRDSRSEPKRVEGLEN--VN 139
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACG 186
+ A S + D G L+ G GQLG G+ + P +V + ++V +++ G
Sbjct: 140 VQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLG 199
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H+L L D +V+G+G G++G + + L +T G + G A GD
Sbjct: 200 WGHALALTVD---GKVFGWGYVADGRVGNVGLPLEASLLDSITDG----SMKGHHAAGDL 252
Query: 247 SAALSAEGHLYTWGRGFNSTSDVN-----CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVL 301
+ +AE + + +D+ C G +H L+L DG +L
Sbjct: 253 NLE-AAEKKVV---EAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLL 308
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN--RAIMT 359
G + +G L ++ +P+ + +S IAAG HS + R I++
Sbjct: 309 SAGSNIYGQLGRSKQDLGMKPVDITESPIS---------IAAGLGHSLAICNRGERNILS 359
Query: 360 WGWGEHGQLGLG 371
WGW QLG G
Sbjct: 360 WGWNRSRQLGRG 371
Score = 163 (62.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 78/291 (26%), Positives = 121/291 (41%)
Query: 93 VFSWGRGSSGQLG------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
V S+G G+ G LG G +DA P V+ I+ ISAG HS V+ SG
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSD---ISSISAGHYHSLAVTSSGE 102
Query: 147 LFTCGDGTFGQLGH----GDYRSHSSPVKVSSFVNKNVHQ-IACGMRHSLVLLKDCLGNQ 201
++ G GQLG S S P +V N NV A G+ S + D
Sbjct: 103 IWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVV-SAAIGDD---GS 158
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G KRGQLG+ I + +P L +V +S + AL+ +G ++ WG
Sbjct: 159 LWVWGRSKRGQLGLGNGIIEA-RVPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGY 217
Query: 262 GFNS-TSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ +V + +H GD L L + ++ E +S
Sbjct: 218 VADGRVGNVGLPLEASLLDSITDGSMKGHHA---AGD---LNLEAAEKKVV---EAMSKE 268
Query: 321 RPLSVALEK--VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ +A E V KV IA G++HS ++ + +++ G +GQLG
Sbjct: 269 NDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLG 319
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 83/324 (25%), Positives = 119/324 (36%)
Query: 36 VWSWGAGTDGQLGTGR-LHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+W WG GQLG G + + + G H LALT + GKVF
Sbjct: 159 LWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALT-----VDGKVF 213
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG + G++G+ + P + D +IT S +H+ D
Sbjct: 214 GWGYVADGRVGNVGL-----PLEASLLD----SITDGSMKGHHAA--GDLNLEAAEKKVV 262
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
D P V N+ V IACG HSL+L C + GS GQLG
Sbjct: 263 EAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLIL---CHDGTLLSAGSNIYGQLG 319
Query: 215 VSKDRI--RSVSLPQ----VTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
SK + + V + + + GL H + I G+R+ GRG
Sbjct: 320 RSKQDLGMKPVDITESPISIAAGLGHSLAICN---RGERNILSWGWNRSRQLGRG--KPE 374
Query: 268 DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
++ G H L +T GE + G +G L SS P + L
Sbjct: 375 NLPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS--SSDEPEPMLL 432
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVV 351
E V +G V+Q AG +HS ++
Sbjct: 433 EDV---EGC-VLQAVAGFDHSLIL 452
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 54/185 (29%), Positives = 78/185 (42%)
Query: 140 FVSDSG---CLFTCGDGTFGQLG------HGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
F S SG + + GDG G LG G P VS+ + ++ I+ G HS
Sbjct: 36 FTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSISAGHYHS 94
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLG-VSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA 248
L + +++ +G GQLG + D R S S P+ GL ++ + A+G SA
Sbjct: 95 LAVTSS---GEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSA 151
Query: 249 ALSAEGHLYTWGR------GFNS---TSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE 299
A+ +G L+ WGR G + + V LGW H L LT DG+
Sbjct: 152 AIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALTVDGK 211
Query: 300 VLMLG 304
V G
Sbjct: 212 VFGWG 216
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 40/124 (32%), Positives = 57/124 (45%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
A G H LA+ + + SWG S QLG G+ + P+ V FDG + +S
Sbjct: 340 AAGLGHSLAICNRGE---RNILSWGWNRSRQLGRGKPENL--PREVEGFDGE--SPASVS 392
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG HS V++ G + G G G+LG G P+ + V V Q G HSL+
Sbjct: 393 AGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLED-VEGCVLQAVAGFDHSLI 451
Query: 193 LLKD 196
L+ +
Sbjct: 452 LVAE 455
Score = 112 (44.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 33/129 (25%), Positives = 52/129 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
++W+WG +GQLG + D A + S + G ++
Sbjct: 102 EIWAWGRNDEGQLGRIVI-DSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLW 160
Query: 95 SWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-- 151
WGR GQLG G +++A P V + +S GW H+ ++ G +F G
Sbjct: 161 VWGRSKRGQLGLGNGIIEARVPSRVENLAAEH--VVKVSLGWGHALALTVDGKVFGWGYV 218
Query: 152 -DGTFGQLG 159
DG G +G
Sbjct: 219 ADGRVGNVG 227
Score = 108 (43.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 37/152 (24%), Positives = 61/152 (40%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCXXXXXXXXXXXXXXLGWNH 290
++ I+ D S L +G L + G S D+ G H
Sbjct: 287 KVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESPISIAA-GLGH 345
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L + GE +L + ++ +P ++ E V DG ++AG HS
Sbjct: 346 SLAICNRGERNILSWGWNRS----RQLGRGKPENLPRE-VEGFDGESPASVSAGRVHSLC 400
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
VTE WG G++G+LGLG++ D+ P ++
Sbjct: 401 VTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLL 432
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 172 (65.6 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 56/218 (25%), Positives = 91/218 (41%)
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
C QV+ +G G+ GQLG + + P++ L + + ++A G S +S G +
Sbjct: 177 CEAGQVFSWGGGRHGQLGHGS--LEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDI 234
Query: 257 YTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGM--LSDP 314
Y WG +N + + L DG L G + + P
Sbjct: 235 YIWG--WNESGQLALPTRSGTEKKTVR-----EEATELNDDG----LRGEEAALADVGAP 283
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+ +P L+ D VK + G+ H+AVVT + TWGWG++GQLG ++
Sbjct: 284 AHFIAIQPFPALLDLPLGSDAVKA---SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDST 340
Query: 375 DQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 409
P V + F R ++ V CG + + YA+ R
Sbjct: 341 SSDQPCRV---EYFVERQLEVRAVTCGPWNTYVYAVER 375
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 32/84 (38%), Positives = 43/84 (51%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H L L G+VFSWG G GQLGHG + L P+ + G R + ++AG
Sbjct: 169 GAEHALLLCE-----AGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLR--MAEVAAG 221
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQL 158
HS VS++G ++ G GQL
Sbjct: 222 GWHSVCVSETGDIYIWGWNESGQL 245
Score = 117 (46.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 45/199 (22%), Positives = 83/199 (41%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ + G H+ + ++G +F+ G G GQLGHG + P + + + ++A G
Sbjct: 163 VRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGG 222
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS+ + + G+ +Y +G + GQL + ++ ++ + L+D + G A
Sbjct: 223 WHSVCVSET--GD-IYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEA---A 276
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
A + A H + F + D+ G H V+T GE+ G
Sbjct: 277 LADVGAPAHFIAI-QPFPALLDLPLGSDAVKAS------CGSRHTAVVTRTGELYTWGWG 329
Query: 307 HHGMLSDPERVSSTRPLSV 325
+G L + SS +P V
Sbjct: 330 KYGQLGHKDSTSSDQPCRV 348
Score = 106 (42.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACG 186
S G H+ V+ +G L+T G G +GQLGH D S P +V FV + V + CG
Sbjct: 308 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCG 364
Score = 92 (37.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L E A GG H + ++ G ++
Sbjct: 181 QVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSET-----GDIY 235
Query: 95 SWGRGSSGQL 104
WG SGQL
Sbjct: 236 IWGWNESGQL 245
Score = 53 (23.7 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 91 GKVFSWGRGSSGQ-LGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
G F +G GQ LG G A++ P+P+ D + +SA W+++ V+ G
Sbjct: 7 GAWFGFGFCGFGQALGSGNGQHAVHSPEPLHAADD----VCQVSASWSYTALVTRGG 59
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 163 (62.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 52/163 (31%), Positives = 84/163 (51%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
GG+V++ G + GQLG G+ + ++FF ++ I +SAG N S ++ G L+T
Sbjct: 2 GGQVYATGGNNEGQLGLGDTDERSAFHLISFFTS-QHKIKQLSAGSNTSAALTAEGELYT 60
Query: 150 CGDGTFGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ G+LG +H P V +++ V Q+ACG H++VL + VY FG
Sbjct: 61 FGEPESGKLGLPPKLLVNHKVPQLVPG-ISEKVIQVACGGGHTVVLTEKA----VYTFGL 115
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
G+ GQLG+ + S P+V + D +I + G+ AL
Sbjct: 116 GQFGQLGLGTFTFET-SEPKVIESVKDKKISHVCC-GENHTAL 156
Score = 139 (54.0 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 41/124 (33%), Positives = 61/124 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G N LT +GE+ G G L P ++ + + +S KVIQ+A G
Sbjct: 45 GSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE----KVIQVACGGG 100
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFT 404
H+ V+TE +A+ T+G G+ GQLGLG T + PKV+ +D ++ V CG T
Sbjct: 101 HTVVLTE-KAVYTFGLGQFGQLGLGTFTFETSEPKVIE-----SVKDKKISHVCCGENHT 154
Query: 405 YAIS 408
I+
Sbjct: 155 ALIT 158
Score = 130 (50.8 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 37/160 (23%), Positives = 70/160 (43%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++ G +GQLG G + G++ TS + G+++
Sbjct: 4 QVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSN----TSAALTAEGELY 59
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G SG+LG + + P G + ++ G H+ +++ ++T G G
Sbjct: 60 TFGEPESGKLGLPPKLLVNHKVP-QLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQ 117
Query: 155 FGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVL 193
FGQLG G + +S KV S +K + + CG H+ ++
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 137 (53.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+H ++ G + T G G GQLG G+ P VS + ++V Q G H++ L
Sbjct: 34 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLS 91
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSA 252
K QVY FG G LG R SV ++ G +++ +V +SA +AAL+
Sbjct: 92 KS---GQVYSFGCNDEGALG----RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTD 144
Query: 253 EGHLYTWG 260
+G ++ WG
Sbjct: 145 DGRVFLWG 152
Score = 83 (34.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 299 EVLMLGGSHHGMLSDPERVSST-RPLSVALEKVS-NLDGVKVIQIAAGAEHSAVVTENRA 356
EV G SH + D V P+ ++ V LD V V+++A+G +H ++T +
Sbjct: 170 EVWRQGLSHLRVSKDNNGVIGLLEPMKKSMVPVQVQLD-VPVVKVASGNDHLVMLTADGD 228
Query: 357 IMTWGWGEHGQLG 369
+ T G GE GQLG
Sbjct: 229 LYTLGCGEQGQLG 241
Score = 56 (24.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
G +H+++LT DG++ LG G L + + R LE++
Sbjct: 216 GNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERL 259
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 68/290 (23%), Positives = 115/290 (39%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++WG G+ GQLG + +A P Y + AG + V+ +G L +C
Sbjct: 471 GSAYAWGEGTHGQLGLTAL-EAWKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSC 529
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LG + R++ SP ++ + V Q+A G++H L L ++ VY +G+
Sbjct: 530 GSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSRE---GAVYVWGTSTC 586
Query: 211 GQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
G LG+ + + PQ + H + I D SA L A G L+ G GF
Sbjct: 587 GALGLGNYQ-QQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGF 645
Query: 264 NSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
++ + H + L G V +G + G S P
Sbjct: 646 QRSAKITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPT 705
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
V ++ +++ + + V +E+ I WG +G G+G+T
Sbjct: 706 LV-----DSVKSRYIVKANCSDQCTIVASEDNIITVWGT-RNGLPGIGST 749
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 58/227 (25%), Positives = 90/227 (39%)
Query: 37 WSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSW 96
++WG GT GQLG L AC G L + + G + S
Sbjct: 474 YAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQA----GSLLSC 529
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + LG E + PK + R + ++AG H +S G ++ G T G
Sbjct: 530 GSNAHLALGQDEQRNYHSPKLIARLADVR--VEQVAAGLQHVLALSREGAVYVWGTSTCG 587
Query: 157 QLGHGDYRSHSS-PVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
LG G+Y+ P K+ S V +I CG S VL + +++ GS +LG
Sbjct: 588 ALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFAN---GELHVCGSNDYNKLG 644
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ + + +V + H + S+ S L G++YT GR
Sbjct: 645 FQRSA-KITAFKKVQLP-HKVTQACFSST--HSVFLVEGGYVYTMGR 687
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 59/262 (22%), Positives = 100/262 (38%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACG 186
I ++ +H V++ G + G+GT GQLG + P ++ S +N H ++
Sbjct: 454 IVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESV--RNYHVVSAC 511
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+L G+ + G L + +D R+ P++ L D+ + ++A
Sbjct: 512 AGDGFTILVTQAGSLL---SCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQH 568
Query: 247 SAALSAEGHLYTWGRGFNSTSDV-NCXXXXXXXXXXXXXXLGWNHVLVLTGD--GEVLML 303
ALS EG +Y WG + N + + G VL
Sbjct: 569 VLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFA 628
Query: 304 GGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G H S D ++ R + K L KV Q + HS + E + T G
Sbjct: 629 NGELHVCGSNDYNKLGFQRSAKITAFKKVQLPH-KVTQACFSSTHSVFLVEGGYVYTMGR 687
Query: 363 GEHGQLGLGNTCDQI-HPKVVN 383
GQ G+ + C+ + HP +V+
Sbjct: 688 NAEGQRGIRH-CNSVDHPTLVD 708
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 123 (48.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 41/144 (28%), Positives = 64/144 (44%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
A H + LT+ + ++F +G S GQLG G+ + V G I +
Sbjct: 473 ALSKTHTMVLTNDN-----ELFGFGDNSCGQLGFGKFSKMENGRLVESLKGR--DIQSVG 525
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
G S D G L T G T LG G D + + P+ + + +N+ I CG H +
Sbjct: 526 VGNYFSVICCDRGTLLTFG--TAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVV 583
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGV 215
+L+ + G+GS + GQLG+
Sbjct: 584 AVLES---GECLGWGSNQYGQLGL 604
Score = 115 (45.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEKVSN---LDGV--KVIQ 340
G + ++L+ DG ++ +G + H L+ +RV T+ + V+ L G +V+
Sbjct: 645 GKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERVVD 704
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
+ G+ HS V+ E+ +M +G ++ +LGLGN+ V + + T V CG
Sbjct: 705 FSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHACTH--VLCG 762
Query: 401 SGFT 404
GFT
Sbjct: 763 DGFT 766
Score = 99 (39.9 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 34/136 (25%), Positives = 55/136 (40%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R +I ++ H+ +++ LF GD + GQLG G + + V S +++ +
Sbjct: 466 RISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVG 525
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
G S++ C + FG+ K LG+ KD S P + L I I
Sbjct: 526 VGNYFSVIC---CDRGTLLTFGTAKN--LGLGKDAKDSAK-PMLLEQLLRENIKDIYCGH 579
Query: 245 DRSAALSAEGHLYTWG 260
D A+ G WG
Sbjct: 580 DHVVAVLESGECLGWG 595
Score = 63 (27.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 99 GSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G++ LG G+ DA KP+ R I I G +H V +SG G +GQ
Sbjct: 544 GTAKNLGLGK--DAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQ 601
Query: 158 LGHGDYRSHSSPVKVSSFVNK 178
LG +P KV F+N+
Sbjct: 602 LGLPTLEHFFAPTKVF-FLNE 621
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 83/345 (24%), Positives = 144/345 (41%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---------HGEMVDA-LYPKPVTFFD 122
A GG H AL+ G+V++WG LG +G+ VD L + +
Sbjct: 114 AVGGMHSAALSHD-----GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVE 168
Query: 123 G--HRYTITHISAGWNHSGFVSDSGCLFTCGDGTF----GQLGHGDYRSHSS-PVKVSSF 175
G +T + N + ++D+GC FT G TF G LG+ D + ++ P ++
Sbjct: 169 GALSHLRVTKVICSDNLTAAITDNGCCFTWG--TFRCSDGVLGYSDSQKRTAEPTQMRL- 225
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG---VSKDRIRSVSLPQVTIGL 232
+ Q+A G H + L +VY +G+G++ QLG + + R++ ++ PQ + L
Sbjct: 226 --PEICQLATGTDHIIALTTT---GKVYTWGNGQQFQLGRRMLERRRLQGLT-PQ-PLAL 278
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL----GW 288
+I + + A S A+ +G +Y WG + + G+
Sbjct: 279 KNI--ISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGY 336
Query: 289 N---------HVLVLTGDGEVLMLGGSHHGMLSDPER------VSSTRPLSVALEKVSNL 333
N H L L DG VL G L P+ V + + L + +
Sbjct: 337 NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 334 DGV-KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
G+ VIQ+ G H+ VT + + +WG E+ ++G G+ + +
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV 441
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 53/209 (25%), Positives = 80/209 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXX-XXXXXXXXXACGGAHVLALTSPSSVIGGKV 93
KV++WG G QLG L G H A+ + G+V
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNK-----GRV 300
Query: 94 FSWGRGSSGQLG---HGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFT 149
++WG + Q G E A+ KP T D Y + I+ G +H+ + + G +
Sbjct: 301 YAWGLNITRQCGIEVEDEEEGAVITKP-TLVDALEGYNVKSITGGEHHTLALLEDGRVLA 359
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVN------------KNVHQIACGMRHSLVLLKDC 197
G QLG D + VK N NV Q+ CG H+L + D
Sbjct: 360 WGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSD- 418
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
+VY +GS + ++G D V++P
Sbjct: 419 --GKVYSWGSAENYEVGQG-DNDEDVAVP 444
Score = 108 (43.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVT--IGLHDIEIVGISANGDRSAALSAEGHLYTW 259
VY FGSG +LG+ ++ + V P++ + + +V ++ G SAALS +G +YTW
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 260 G 260
G
Sbjct: 133 G 133
Score = 70 (29.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
V L+G V I G H+ + E+ ++ WG + QLG+ D P+ V + DE
Sbjct: 330 VDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIP---DNALPETV-VKDEKG 385
Query: 390 N 390
N
Sbjct: 386 N 386
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 187 (70.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 70/273 (25%), Positives = 112/273 (41%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGHGD S+ P V K + Q++CG ++ + + Q+Y FGS
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE---GQLYAFGSDYY 455
Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
G +GV K V P Q+ L++ + +S + L+ +Y+WG G
Sbjct: 456 GCMGVDKVAGPEVLEPMQLNFFLNN-PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
Query: 264 NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+S D + G + +LT G+VL G + L + +S
Sbjct: 515 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGII 574
Query: 322 --------PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + + L K+ IA G H+A + E ++T+G + GQLG+GN
Sbjct: 575 NHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY 634
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
++ + LG + + V CG FT A
Sbjct: 635 KKRLGINL--LGGPLGGKQV-IRVSCGDEFTIA 664
Score = 163 (62.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 52/200 (26%), Positives = 83/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 377 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIRQVSCG 434
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + V+D G L+ G +G +G P++++ F+N V Q++CG H +V
Sbjct: 435 DDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVV 494
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 495 LTRN---KEVYSWGCGEYGRLGLDSEE--DYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 550 SGKVLACGLNEFNKLGLNQC 569
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/206 (26%), Positives = 88/206 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV+ LT +V+SWG G G+LG D P+ V I +
Sbjct: 486 SCGDNHVVVLTRNK-----EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQ 538
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKN----- 179
G + + ++ SG + CG F +LG S H P S + K
Sbjct: 539 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYK 598
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
+ IA G H+ + D G ++ FG K GQLGV + R ++L +G +++
Sbjct: 599 IRTIAPGKTHTAAI--DERG-RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLG--GKQVI 653
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGN 679
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 46/189 (24%), Positives = 74/189 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
+V+SWG G G+LG D CG LT V+ G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + SG + H + Y T Y I I+ G H+ + + G L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG G+Y+ + + K V +++CG ++ D N ++ +G+
Sbjct: 620 TFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 676
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 677 GGNGRLAMT 685
Score = 71 (30.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
L G +VI+++ G E + T++ I WG G +G+L + T
Sbjct: 647 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPT 687
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 183 (69.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 65/215 (30%), Positives = 100/215 (46%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV------------DALYPKPVTFF- 121
G H L +T + G WGR QLG E V D Y KP+
Sbjct: 184 GYEHSLVVTKDDGIYG-----WGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLK 238
Query: 122 --DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG----DYRSHSSPVKVSSF 175
D I +G +H+ + + G L++ G+G FG LGHG D + +P K+++F
Sbjct: 239 ETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTF 298
Query: 176 -VNKN---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
+N N + IACG HS+ L D N++Y FG G+ GQLG ++ + +P+
Sbjct: 299 TLNNNESRIVDIACGGYHSMFLTND---NEIYTFGYGEFGQLGHGENDTLNHYIPKRIKS 355
Query: 232 LHDI----EIVGISANGDRSAA--LSAEGHLYTWG 260
D +I I A GD + + ++ +G +Y+WG
Sbjct: 356 TGDNAAGNKIKSIFA-GDHANSFYITTDGSVYSWG 389
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 59/191 (30%), Positives = 88/191 (46%)
Query: 36 VWSWGAGTDGQLGTG-RLHDEXX-------XXXXXXXXXXXXXXXACGGAHVLALTSPSS 87
++SWG G G LG G +D+ ACGG H + LT+ +
Sbjct: 266 LYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDN- 324
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDAL--Y-PKPV--TFFDGHRYTITHISAGWNHSGF-V 141
+++++G G GQLGHGE D L Y PK + T + I I AG + + F +
Sbjct: 325 ----EIYTFGYGEFGQLGHGEN-DTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYI 379
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
+ G +++ G G LGHG +H SP K+ S N+ +I G +H+L + N
Sbjct: 380 TTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSL--SNIKKITSGFKHTLA---QSINND 434
Query: 202 VYGFGSGKRGQ 212
+Y FG GQ
Sbjct: 435 IYVFGDNTFGQ 445
Score = 154 (59.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 91 GKVFSWGRGSSGQLGHG---EMVDALY-PKPVTFF--DGHRYTITHISAGWNHSGFVSDS 144
G ++SWG G G LGHG + +Y PK +T F + + I I+ G HS F+++
Sbjct: 264 GSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTND 323
Query: 145 GCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSF----VNKNVHQIACGMR-HSLVLLKDC 197
++T G G FGQLGHG D +H P ++ S + I G +S + D
Sbjct: 324 NEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTD- 382
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
VY +G G LG + S P+ L +I+ I++ + A S +Y
Sbjct: 383 --GSVYSWGWNDGGSLGHGTNE-NHYS-PKKIQSLSNIK--KITSGFKHTLAQSINNDIY 436
Query: 258 TWGRG-FNSTS 267
+G F T+
Sbjct: 437 VFGDNTFGQTA 447
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/150 (26%), Positives = 65/150 (43%)
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXX 282
+S ++ I L+ ++ I AN S ++ Y WG N ++V
Sbjct: 60 ISETELPIKLNGLKAKDIFANAYHSGIINENDEFYHWGLYSNLVTEVPNKIKINNDKKIS 119
Query: 283 XXXLGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK--VI 339
LG N +++ T D ++ +G S +G+L + + EKV ++ +I
Sbjct: 120 NVSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNII 179
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
I +G EHS VVT++ I WG QLG
Sbjct: 180 SIVSGYEHSLVVTKDDGIYGWGRNHKNQLG 209
Score = 121 (47.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGML------SDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
G +H L+L DG + G + G L +D E + + P + ++N + +++
Sbjct: 253 GSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYT--PKKITTFTLNNNES-RIVD 309
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHPK-VVNLGDEFQNRDTQLEV 397
IA G HS +T + I T+G+GE GQLG G +T + PK + + GD + +
Sbjct: 310 IACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIK-SI 368
Query: 398 FCG 400
F G
Sbjct: 369 FAG 371
Score = 108 (43.1 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 27/98 (27%), Positives = 43/98 (43%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS-NLDGVKVIQIAAGA 345
G H + LT D E+ G G L E + + ++ N G K+ I AG
Sbjct: 313 GGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGD 372
Query: 346 E-HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+S +T + ++ +WGW + G LG G + PK +
Sbjct: 373 HANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI 410
Score = 100 (40.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 162 DYRSHSSPV-KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS---K 217
D +++ V K+ F N N+ I G HSLV+ KD + +YG+G + QLG K
Sbjct: 160 DNNNNNEKVYKIEKF-NDNIISIVSGYEHSLVVTKD---DGIYGWGRNHKNQLGGRERVK 215
Query: 218 DRIRSVSLPQ--------VTIGLHDIEIV-----GISANGDRSAALSAEGHLYTWGRGF 263
D+ S S P + + L + + + I + D + L +G LY+WG G+
Sbjct: 216 DKSSSPSSPSEDEYYSKPIKV-LKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGY 273
Score = 95 (38.5 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS--STRPLSVALEKVSNLDGVKVIQ---- 340
G+ H LV+T D + G +H L ERV S+ P S + ++ + +KV++
Sbjct: 184 GYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKP-IKVLKETDP 242
Query: 341 -------IAAGAEHSAVVTENRAIMTWGWGEHGQLGLG---NTCDQIH-PKVVNLGDEFQ 389
I +G++H+ ++ + ++ +WG G G LG G N + I+ PK +
Sbjct: 243 IFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNN 302
Query: 390 NRDTQLEVFCG 400
N +++ CG
Sbjct: 303 NESRIVDIACG 313
Score = 75 (31.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK----DRIRSVS 224
P K+ +K + ++ G ++ KD NQ+Y G K G LG+ + D + +
Sbjct: 107 PNKIKINNDKKISNVSLGGNFIILQTKD--DNQLYSIGKSKYGVLGIGRSIDDDDDNNNN 164
Query: 225 LPQV-TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+V I + I+ I + + S ++ + +Y WGR
Sbjct: 165 NEKVYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWGR 202
Score = 42 (19.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/90 (23%), Positives = 36/90 (40%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA-----LYPKPVTFFDGHRYTIT 129
GG ++ T + +++S G+ G LG G +D + V + I
Sbjct: 124 GGNFIILQTKDDN----QLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNII 179
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
I +G+ HS V+ ++ G QLG
Sbjct: 180 SIVSGYEHSLVVTKDDGIYGWGRNHKNQLG 209
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 67/267 (25%), Positives = 103/267 (38%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG LT G + ++G GS+G LGHG + D P V G Y + ++
Sbjct: 388 ACGDLFTACLTDR-----GIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG--YEMVQVA 440
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G +H +S LF G G G+LG G SH P V + ++ CG+ S++
Sbjct: 441 CGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMI 500
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ------VT---IGLHDIE---IVGI 240
L + Q GS + +LG+ + P VT +G ++ ++ +
Sbjct: 501 LT---VPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSV 557
Query: 241 SANGDRSAALS-AEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE 299
SAA++ A G YT+G S C G + + +GE
Sbjct: 558 DLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 617
Query: 300 VLMLGGSHHGMLS-DPERVSSTRPLSV 325
V G G L E RP+ +
Sbjct: 618 VFSWGKGARGRLGRKDEDAGLPRPVQL 644
Score = 164 (62.8 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 59/230 (25%), Positives = 91/230 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L+D ACG +HVLAL++ ++F+
Sbjct: 403 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTER-----ELFA 457
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G CG F
Sbjct: 458 WGRGDGGRLGLGTRESHCCPQLVPMPPGQE--AQRVVCGIDSSMILTVPGQALACGSNRF 515
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQL 213
+LG P V + V G LL LG + G
Sbjct: 516 NKLGLDPLSLGEEPAPHQQ-VEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDC 574
Query: 214 GVSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
R VS + GL I+I ++ + A+ AEG +++WG+G
Sbjct: 575 YTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKG 624
Score = 146 (56.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 55/193 (28%), Positives = 83/193 (43%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITHIS 132
G L L +PS V + G G G L G ++ P+ V+ F +G TI H++
Sbjct: 332 GVTRCLPLPAPSPV-PSQAPPLGAGG-GALLPGA-IEQPQPQFVSRFLEGQSGVTIKHVA 388
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G + ++D G + T G G+ G LGHG S P V + + + Q+ACG H L
Sbjct: 389 CGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLA 448
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L + +++ +G G G+LG+ S PQ+ E + D S L+
Sbjct: 449 LSTE---RELFAWGRGDGGRLGLGTRE--SHCCPQLVPMPPGQEAQRVVCGIDSSMILTV 503
Query: 253 EGHLYTWGRG-FN 264
G G FN
Sbjct: 504 PGQALACGSNRFN 516
Score = 84 (34.6 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
S+ R +S A +V L G+K+ +A G + + + +WG G G+LG + D
Sbjct: 579 SNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAG 637
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTY-AISR 409
P+ V L DE + T V C G T A+ R
Sbjct: 638 LPRPVQL-DE-THPYTVTSVSCCHGNTLLAVRR 668
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 178 (67.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 70/273 (25%), Positives = 111/273 (40%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGHGD S+ P V K + Q++CG ++ + + Q+Y FGS
Sbjct: 409 GTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDE---GQLYAFGSDYY 465
Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
G +G+ K V P Q+ L + + +S + A L+ +YTWG G
Sbjct: 466 GCIGIDKAYGSEVLEPLQLDFFLTN-PVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGL 524
Query: 264 NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+S D + G + +LT G+VL G + L + S
Sbjct: 525 DSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGII 584
Query: 322 --------PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + +L L K+ I+ G H+A + E ++T+G + GQLG+G+
Sbjct: 585 NHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDY 644
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ H + L + + V CG FT A
Sbjct: 645 --KKHLGINLLAGPLGGKQV-IRVSCGDEFTIA 674
Score = 156 (60.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 387 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGK--AIRQVSCG 444
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHS-SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + ++D G L+ G +G +G Y S P+++ F+ V Q++CG H V
Sbjct: 445 DDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAV 504
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 505 LTRN---REVYTWGCGEYGRLGLDSEEDHYT--PQKVDVPKTLNIVSVHCGCDGTFLLTQ 559
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 560 TGKVLACGLNEFNKLGLNQC 579
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/189 (25%), Positives = 76/189 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACG--GAHVLALTSPSSVIGGK 92
+V++WG G G+LG D CG G +L T G
Sbjct: 510 EVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLN 569
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + +SG + H + Y +T Y I IS G H+ + + G L
Sbjct: 570 EFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLL 629
Query: 149 TCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG GDY+ H + K V +++CG ++ D N ++ +G+
Sbjct: 630 TFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 686
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 687 GGNGRLAMT 695
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/205 (25%), Positives = 88/205 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV LT +V++WG G G+LG D P+ V I +
Sbjct: 496 SCGDNHVAVLTR-----NREVYTWGCGEYGRLGLDSEEDHYTPQKVDV--PKTLNIVSVH 548
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS----HSS----PVKVSSFVNKN----- 179
G + + ++ +G + CG F +LG S H + P S + K
Sbjct: 549 CGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYK 608
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
+ I+ G H+ + D G ++ FGS K GQLGV D + + + + L +++
Sbjct: 609 IRTISPGKTHTASI--DERG-RLLTFGSNKCGQLGVG-DYKKHLGINLLAGPLGGKQVIR 664
Query: 240 ISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 665 VSCGDEFTIAATDDNHIFAWGNGGN 689
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 34/125 (27%), Positives = 62/125 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST--RPLSVALEKVSNLDGVKVIQIAAG 344
G + + +T +G++ G ++G + + S PL + ++N V Q++ G
Sbjct: 444 GDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF-LTN----PVEQVSCG 498
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
H AV+T NR + TWG GE+G+LGL + D P+ V++ + V CG T
Sbjct: 499 DNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNI----VSVHCGCDGT 554
Query: 405 YAISR 409
+ +++
Sbjct: 555 FLLTQ 559
Score = 99 (39.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 39/180 (21%), Positives = 73/180 (40%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGRG 99
G GQLG G +CG + +T G+++++G
Sbjct: 409 GTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDE-----GQLYAFGSD 463
Query: 100 SSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G +G + + L P + FF + + +S G NH ++ + ++T G G +G+
Sbjct: 464 YYGCIGIDKAYGSEVLEPLQLDFFLTN--PVEQVSCGDNHVAVLTRNREVYTWGCGEYGR 521
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG H +P KV N+ + CG + +L + +V G + +LG+++
Sbjct: 522 LGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQT---GKVLACGLNEFNKLGLNQ 578
Score = 77 (32.2 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + G +L G + G L + + L + L L G +VI+++ G E
Sbjct: 615 GKTHTASIDERGRLLTFGSNKCGQLGVGDY---KKHLGINL-LAGPLGGKQVIRVSCGDE 670
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ T++ I WG G +G+L + T ++ H
Sbjct: 671 FTIAATDDNHIFAWGNGGNGRLAMTPT-ERAH 701
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 185 (70.2 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 70/273 (25%), Positives = 111/273 (40%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGHGD S+ P V K + Q++CG ++ + + Q+Y FGS
Sbjct: 399 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE---GQLYAFGSDYY 455
Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
G +GV K V P Q+ L + + +S + L+ +Y+WG G
Sbjct: 456 GCMGVDKVAGPEVLEPMQLNFFLSN-PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
Query: 264 NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+S D + G + +LT G+VL G + L + +S
Sbjct: 515 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGII 574
Query: 322 --------PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + + L K+ IA G H+A + E ++T+G + GQLG+GN
Sbjct: 575 NHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNY 634
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
++ + LG + + V CG FT A
Sbjct: 635 KKRLGINL--LGGPLGGKQV-IRVSCGDEFTIA 664
Score = 158 (60.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 51/200 (25%), Positives = 83/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 377 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIRQVSCG 434
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + V+D G L+ G +G +G P++++ F++ V Q++CG H +V
Sbjct: 435 DDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVV 494
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 495 LTRN---KEVYSWGCGEYGRLGLDSEE--DYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 550 SGKVLACGLNEFNKLGLNQC 569
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/206 (26%), Positives = 88/206 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV+ LT +V+SWG G G+LG D P+ V I +
Sbjct: 486 SCGDNHVVVLTRNK-----EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQ 538
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKN----- 179
G + + ++ SG + CG F +LG S H P S + K
Sbjct: 539 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 598
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
+ IA G H+ + D G ++ FG K GQLGV + R ++L +G +++
Sbjct: 599 IRTIAPGKTHTAAI--DERG-RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLG--GKQVI 653
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 654 RVSCGDEFTIAATDDNHIFAWGNGGN 679
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 46/189 (24%), Positives = 74/189 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
+V+SWG G G+LG D CG LT V+ G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + SG + H + Y T Y I I+ G H+ + + G L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG G+Y+ + + K V +++CG ++ D N ++ +G+
Sbjct: 620 TFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 676
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 677 GGNGRLAMT 685
Score = 71 (30.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
L G +VI+++ G E + T++ I WG G +G+L + T
Sbjct: 647 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPT 687
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 181 (68.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 77/251 (30%), Positives = 103/251 (41%)
Query: 35 KVWSWGA--GTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGK 92
+V+ WG DG LG + CG HVLAL G
Sbjct: 251 QVYGWGTFRSNDGILGFDA-KTKVQTTPKLLPDLKKIKHLVCGDNHVLALNDK-----GA 304
Query: 93 VFSWGRGSSGQLGHG----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
V SWG G QLG ++ L P+ G I HI AG HS V SG +F
Sbjct: 305 VLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKG----IVHIGAGAFHSFAVHQSGKVF 360
Query: 149 TCGDGTFGQLGHGDYRSHSS-----PVKVSSFVNKNVHQIACGMRHSLVLLKD--CL-GN 200
G +FG+ G + S P V S KNV QI G HS+ +D CL
Sbjct: 361 AWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWG 420
Query: 201 QVYGFGSG-KRGQL---GVSKD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
++ G+ +G K L V KD R R L + T + I+ ++A D S A+ G
Sbjct: 421 RLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPT-AVPGIKAKAVAAGSDHSIAIDTSGR 479
Query: 256 LYTWGRGFNST 266
++WG F++T
Sbjct: 480 PWSWG--FSAT 488
Score = 128 (50.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 53/191 (27%), Positives = 78/191 (40%)
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCXXXXXXXXXXXXX 284
H IV ++A S AL+ EG +Y WG GF++ + V
Sbjct: 229 HGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIKH 288
Query: 285 XL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
+ G NHVL L G VL G L R+ L+ + L ++ I A
Sbjct: 289 LVCGDNHVLALNDKGAVLSWGSGQQNQLG--RRIIERNKLNGLQPREFGLPK-GIVHIGA 345
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLG-NTCDQ----IHPKVVNLGDEFQNRD-TQLEV 397
GA HS V ++ + WG G+ G+ N D +HP VV D ++ TQ+
Sbjct: 346 GAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVV---DSLSKKNVTQI-- 400
Query: 398 FCGSGFTYAIS 408
CG G ++I+
Sbjct: 401 -CG-GAHHSIA 409
Score = 101 (40.6 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 44/151 (29%), Positives = 68/151 (45%)
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTF----GQLGHGDYRSHSSPVKVSSFVNKN 179
H I ++AG + S ++D G ++ G GTF G LG + K+ + K
Sbjct: 229 HGTVIVEVAAGDSSSFALTDEGQVY--GWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKI 286
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG---VSKDRIRSVSLPQVTIGLHDIE 236
H + CG H L L D V +GSG++ QLG + ++++ + P+ GL
Sbjct: 287 KH-LVCGDNHVLAL-ND--KGAVLSWGSGQQNQLGRRIIERNKLNGLQ-PR-EFGLPK-G 339
Query: 237 IVGISANGDRSAALSAEGHLYTWG-RGFNST 266
IV I A S A+ G ++ WG F T
Sbjct: 340 IVHIGAGAFHSFAVHQSGKVFAWGLNSFGET 370
Score = 89 (36.4 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 29/103 (28%), Positives = 46/103 (44%)
Query: 287 GWNHVLVLTGDGEVLMLG---GSHHGM----LSDPERVSSTRPLSVALEKVSNLDGVKVI 339
G +H + T DGE L+ G G G+ L D + R L + + + G+K
Sbjct: 403 GAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAK 462
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+AAG++HS + + +WG+ Q G G T D + V
Sbjct: 463 AVAAGSDHSIAIDTSGRPWSWGFSATYQTGQG-TQDDVEVATV 504
Score = 72 (30.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 202 VYGFGSGKRGQLGVSKDR-IRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYT 258
VY G G G+LG+ + + V P++ L D+ +V ++ G AL+ + + T
Sbjct: 112 VYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLT 171
Query: 259 WG 260
WG
Sbjct: 172 WG 173
Score = 64 (27.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 147 LFTCGDGTFGQLGHG------DY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
++ CG+G+ G+LG G D R +P + V V Q+A G H + L D
Sbjct: 112 VYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVG--VVQVAVGGMHCVALTHD--- 166
Query: 200 NQVYGFGSGKRGQLG 214
N+V +G +G LG
Sbjct: 167 NKVLTWGVNDQGALG 181
Score = 61 (26.5 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 24/90 (26%), Positives = 34/90 (37%)
Query: 21 KPKIXXXXXXQQVVKVWSWGAGTDGQLGTG---RLHD--EXXXXXXXXXXXXXXXXXACG 75
+PK+ + V+ G G+ G+LG G + D A G
Sbjct: 97 RPKVVINNAPTAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVG 156
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
G H +ALT + KV +WG G LG
Sbjct: 157 GMHCVALTHDN-----KVLTWGVNDQGALG 181
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 67/267 (25%), Positives = 103/267 (38%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
ACG LT G + ++G GS+G LGHG + D P V G Y + ++
Sbjct: 392 ACGDLFTACLTDR-----GIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG--YEMVQVA 444
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G +H +S LF G G G+LG G SH P V + ++ CG+ S++
Sbjct: 445 CGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMI 504
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ------VT---IGLHDIE---IVGI 240
L + Q GS + +LG+ + P VT +G ++ ++ +
Sbjct: 505 LT---VPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSV 561
Query: 241 SANGDRSAALS-AEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE 299
SAA++ A G YT+G S C G + + +GE
Sbjct: 562 DLGTAHSAAVTXASGDCYTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 621
Query: 300 VLMLGGSHHGMLS-DPERVSSTRPLSV 325
V G G L E RP+ +
Sbjct: 622 VFSWGKGARGRLGRKDEDAGLPRPVQL 648
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 59/230 (25%), Positives = 91/230 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
+ ++G+G++G LG G L+D ACG +HVLAL++ ++F+
Sbjct: 407 IMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTER-----ELFA 461
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LG G P+ V G + G + S ++ G CG F
Sbjct: 462 WGRGDGGRLGLGTRESHCCPQLVPMPPGQE--AQRVVCGIDSSMILTVPGQALACGSNRF 519
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQL 213
+LG P V + V G LL LG + G
Sbjct: 520 NKLGLDPLSLGEEPAPHQQ-VEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDC 578
Query: 214 GVSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
R VS + GL I+I ++ + A+ AEG +++WG+G
Sbjct: 579 YTFGSNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKG 628
Score = 146 (56.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 55/193 (28%), Positives = 83/193 (43%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHR-YTITHIS 132
G L L +PS V + G G G L G ++ P+ V+ F +G TI H++
Sbjct: 336 GVTRCLPLPAPSPV-PSQAPPLGAGG-GALLPGA-IEQPQPQFVSRFLEGQSGVTIKHVA 392
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G + ++D G + T G G+ G LGHG S P V + + + Q+ACG H L
Sbjct: 393 CGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLA 452
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L + +++ +G G G+LG+ S PQ+ E + D S L+
Sbjct: 453 LSTE---RELFAWGRGDGGRLGLGTRE--SHCCPQLVPMPPGQEAQRVVCGIDSSMILTV 507
Query: 253 EGHLYTWGRG-FN 264
G G FN
Sbjct: 508 PGQALACGSNRFN 520
Score = 83 (34.3 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
S+ R +S A +V L G+K+ +A G + + + +WG G G+LG + D
Sbjct: 583 SNARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDE-DAG 641
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFT 404
P+ V L DE + T V C G T
Sbjct: 642 LPRPVQL-DE-THPYTVTSVSCCHGNT 666
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 110 (43.8 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 318 SSTRPLSVALEKVSN--LDGVKVIQ-IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
SS+ P S +L+ + +K ++ IA G +++A +TE + WG EHG+LGLG+T
Sbjct: 393 SSSSPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTI 452
Query: 375 DQIHP-KVVNLGDE 387
D+ P +V+ L +E
Sbjct: 453 DRRTPTRVIRLKNE 466
Score = 99 (39.9 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP--VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
VF++G GS+G LG G++ D P P V +F + ++ G H+ FV+D L+ C
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 151 G 151
G
Sbjct: 63 G 63
Score = 83 (34.3 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ +I+ G ++ +++ G L+ G G+LG GD +P +V N+ V IAC
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 188 RHS 190
HS
Sbjct: 476 THS 478
Score = 78 (32.5 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPV--KVSSF--VNKNVHQIACGMRHSLVLLKD 196
+FT G G+ G LG G + P KV+ F ++K V ++ACG H++ + D
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDD 56
Score = 75 (31.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 25/83 (30%), Positives = 36/83 (43%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G + LT GE+ M G + HG L + + P +V L V IA +
Sbjct: 422 GVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPT-----RVIRLKNEVVSTIACSST 476
Query: 347 HSAVVTENRAIMTWGWG-EHGQL 368
HSA TE+ + WG E G++
Sbjct: 477 HSACYTESGKMYVWGQSDETGKI 499
Score = 75 (31.5 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K V IA G++++ L + ++Y +G + G+LG+ D I + P I L + +
Sbjct: 414 KCVKYIATGVKNTAALTE---WGELYMWGINEHGELGLG-DTIDRRT-PTRVIRLKNEVV 468
Query: 238 VGISANGDRSAALSAEGHLYTWGR 261
I+ + SA + G +Y WG+
Sbjct: 469 STIACSSTHSACYTESGKMYVWGQ 492
Score = 74 (31.1 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 162 DYRSHSSPVKVSSFVNKN-----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
D H +P+++S+ +N + Q+A G H +VLL + G V+ +GS GQLG
Sbjct: 312 DPNIHFTPIRISTHFLENSPLNTIKQVALGNYH-IVLLTE--GGNVWTWGSNSNGQLGYL 368
Query: 217 KD 218
D
Sbjct: 369 VD 370
Score = 74 (31.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ ++ + N + Q+A G H ++TE + TWG +GQLG
Sbjct: 319 PIRISTHFLENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 73 (30.8 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK----VIQI 341
+G H++ LT GEV+ +G + G L R + + + + DG+ V+ I
Sbjct: 579 MGNFHLVCLTDSGEVVTIGRNKTGQLG---RTDAENEPGIVKQLSFDPDGLNSDEFVVSI 635
Query: 342 AAGAEHSAVVTEN 354
AAG HS + EN
Sbjct: 636 AAGEFHSVALVEN 648
Score = 73 (30.8 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
A G H++ LT GG V++WG S+GQLG+ +VD
Sbjct: 339 ALGNYHIVLLTE-----GGNVWTWGSNSNGQLGY--LVD 370
Score = 57 (25.1 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 36 VWSWGAGTDGQLG 48
VW+WG+ ++GQLG
Sbjct: 354 VWTWGSNSNGQLG 366
Score = 50 (22.7 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 8/22 (36%), Positives = 17/22 (77%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE 55
+ V+++G G++G LG G++ D+
Sbjct: 1 MSVFTFGHGSNGALGLGKITDD 22
Score = 48 (22.0 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L+ V I G H +T++ ++T G + GQLG
Sbjct: 569 LENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLG 605
Score = 45 (20.9 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGML 311
LG H+++LT G V G + +G L
Sbjct: 340 LGNYHIVLLTEGGNVWTWGSNSNGQL 365
Score = 43 (20.2 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTW 360
G K+ Q+A G AV+T+ + W
Sbjct: 531 GGKIKQLACGQRCIAVLTQMGEVFMW 556
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 250 LSAEGHLYTWGRGFN 264
L+ G+++TWG N
Sbjct: 348 LTEGGNVWTWGSNSN 362
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 183 (69.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 67/272 (24%), Positives = 108/272 (39%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGHGD S+ P V K + Q++CG ++ + + Q+Y FGS
Sbjct: 418 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE---GQLYAFGSDYY 474
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
G +GV K V P + + +S + L+ +Y+WG G +
Sbjct: 475 GCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLD 534
Query: 265 STSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR- 321
S D + G + +LT G+VL G + L + +S
Sbjct: 535 SEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIIN 594
Query: 322 -------PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
P + + L K+ +A G H+A + E ++T+G + GQLG+GN
Sbjct: 595 HEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYK 654
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
++ + LG + + V CG FT A
Sbjct: 655 KRLGINL--LGGPLGGKQV-IRVSCGDEFTIA 683
Score = 160 (61.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 396 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIRQVSCG 453
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + V+D G L+ G +G +G P++++ F N V Q++CG H +V
Sbjct: 454 DDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVV 513
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 514 LTRN---KEVYSWGCGEYGRLGLDSEE--DYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 568
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 569 SGKVLACGLNEFNKLGLNQC 588
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 54/206 (26%), Positives = 88/206 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV+ LT +V+SWG G G+LG D P+ V I +
Sbjct: 505 SCGDNHVVVLTRNK-----EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQ 557
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKN----- 179
G + + ++ SG + CG F +LG S H P S + K
Sbjct: 558 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 617
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
+ +A G H+ + D G ++ FG K GQLGV + R ++L +G +++
Sbjct: 618 IRTVAPGKTHTAAI--DERG-RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLG--GKQVI 672
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 673 RVSCGDEFTIAATDDNHIFAWGNGGN 698
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 45/189 (23%), Positives = 74/189 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
+V+SWG G G+LG D CG LT V+ G
Sbjct: 519 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 578
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + SG + H + Y T Y I ++ G H+ + + G L
Sbjct: 579 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLL 638
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG G+Y+ + + K V +++CG ++ D N ++ +G+
Sbjct: 639 TFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 695
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 696 GGNGRLAMT 704
Score = 71 (30.1 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
L G +VI+++ G E + T++ I WG G +G+L + T
Sbjct: 666 LGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPT 706
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 183 (69.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 70/273 (25%), Positives = 111/273 (40%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGHGD S+ P V K + Q++CG ++ + + Q+Y FGS
Sbjct: 416 GTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDE---GQLYAFGSDYY 472
Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
G +GV K V P Q+ L + + +S + L+ +Y+WG G
Sbjct: 473 GCMGVDKVAGAEVLEPMQLDFFLSN-PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 531
Query: 264 NSTSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+S D + G + +LT G+VL G + L + +S
Sbjct: 532 DSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGII 591
Query: 322 --------PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + + L K+ IA G H+A + E ++T+G + GQLG+GN
Sbjct: 592 NHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGNY 651
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
++ + LG + + V CG FT A
Sbjct: 652 KKRLGINL--LGGPLGGKQV-IRVSCGDEFTIA 681
Score = 157 (60.3 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 51/200 (25%), Positives = 82/200 (41%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H +T + G GQLGHG+ PK V G I +S G
Sbjct: 394 GNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIRQVSCG 451
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLV 192
+ + V+D G L+ G +G +G P+++ F++ V Q++CG H +V
Sbjct: 452 DDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVV 511
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L ++ +VY +G G+ G+LG+ + PQ + IV + D + L+
Sbjct: 512 LTRN---KEVYSWGCGEYGRLGLDSEE--DYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 566
Query: 253 EGHLYTWGRG-FNSTSDVNC 271
G + G FN C
Sbjct: 567 SGKVLACGLNEFNKLGLNQC 586
Score = 147 (56.8 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 56/206 (27%), Positives = 88/206 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+CG HV+ LT +V+SWG G G+LG D P+ V I +
Sbjct: 503 SCGDNHVVVLTRNK-----EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQ 555
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKN----- 179
G + + ++ SG + CG F +LG S H P S + K
Sbjct: 556 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK 615
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIV 238
+ IA G H+ L D G ++ FG K GQLGV + R ++L +G +++
Sbjct: 616 IRTIAPGKTHTAAL--DERG-RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLG--GKQVI 670
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN 264
+S + + A + + H++ WG G N
Sbjct: 671 RVSCGDEFTIAATDDNHIFAWGNGGN 696
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 46/189 (24%), Positives = 74/189 (39%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVI--GGK 92
+V+SWG G G+LG D CG LT V+ G
Sbjct: 517 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 576
Query: 93 VFS---WGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLF 148
F+ + SG + H + Y T Y I I+ G H+ + + G L
Sbjct: 577 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLL 636
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
T G GQLG G+Y+ + + K V +++CG ++ D N ++ +G+
Sbjct: 637 TFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD---NHIFAWGN 693
Query: 208 GKRGQLGVS 216
G G+L ++
Sbjct: 694 GGNGRLAMT 702
Score = 73 (30.8 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 24/87 (27%), Positives = 39/87 (44%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H L G +L G + G L + + L + L L G +VI+++ G E
Sbjct: 622 GKTHTAALDERGRLLTFGCNKCGQLGVG---NYKKRLGINLLG-GPLGGKQVIRVSCGDE 677
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ T++ I WG G +G+L + T
Sbjct: 678 FTIAATDDNHIFAWGNGGNGRLAMTPT 704
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 130 (50.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 61/255 (23%), Positives = 101/255 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VW WG GQL G +H+ +V+ S + + GK S
Sbjct: 89 VWGWGNNYTGQLDFGNIHE---MTKPARIPLDSFIPEMAPDDYVVQFAS-ADFLSGKARS 144
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRY----TITHISAGWNHSGFVSDSGCLFTCG 151
GQL H + + F Y TI + + + H+ +++ G ++ G
Sbjct: 145 LVATRQGQL-HEYYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAFILTEEGGIYGWG 203
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G+LG GD S P ++ +F + + + ++ + G+ VY +G
Sbjct: 204 FNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGH-VYVWG 262
Query: 207 SGKRGQLGVS--KDRIRSVSLP-QVTIGLH-DIEIVGISANGDR-SAALSAEGHLYTWGR 261
RG+LG+ +DR+ V L H D I+ + GDR + AL+ G++Y WG+
Sbjct: 263 FNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVV-GDRHTLALTQLGYIYAWGK 321
Query: 262 ------GFNSTSDVN 270
GF D N
Sbjct: 322 NSYGQLGFRDQQDRN 336
Score = 89 (36.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 40/158 (25%), Positives = 61/158 (38%)
Query: 244 GDR-SAALSAEGHLYTWGR------GFNSTSDVNCXXXX---------XXXXXXXXXXLG 287
GDR + AL+ G++Y WG+ GF D N G
Sbjct: 303 GDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAG 362
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD--GVKVIQIAAGA 345
L T G + + G + DPE P+ + L G ++++ AG
Sbjct: 363 GARSLARTEQGFIYIWGARWLLVRGDPE--FRHHPMLLTENYFPGLRRRGDHLVELIAGP 420
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+H+ TE I WG +GQLGLG+ Q P +++
Sbjct: 421 DHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLD 458
Score = 74 (31.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 32/126 (25%), Positives = 51/126 (40%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL--DGVKVIQIAA 343
+G H L LT G + G + +G L ++ RP + + L ++I++ A
Sbjct: 302 VGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIA 361
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQNR-DTQLEVFCG 400
G S TE I WG L G+ + HP ++ N + R D +E+ G
Sbjct: 362 GGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAG 419
Query: 401 SGFTYA 406
T A
Sbjct: 420 PDHTLA 425
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 130 (50.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 61/255 (23%), Positives = 101/255 (39%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
VW WG GQL G +H+ +V+ S + + GK S
Sbjct: 89 VWGWGNNYTGQLDFGNIHE---MTKPARIPLDSFIPEMAPDDYVVQFAS-ADFLSGKARS 144
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRY----TITHISAGWNHSGFVSDSGCLFTCG 151
GQL H + + F Y TI + + + H+ +++ G ++ G
Sbjct: 145 LVATRQGQL-HEYYWERISNTRSEFIQHRHYELNVTIVQLLSDYRHAFILTEEGGIYGWG 203
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G+LG GD S P ++ +F + + + ++ + G+ VY +G
Sbjct: 204 FNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGH-VYVWG 262
Query: 207 SGKRGQLGVS--KDRIRSVSLP-QVTIGLH-DIEIVGISANGDR-SAALSAEGHLYTWGR 261
RG+LG+ +DR+ V L H D I+ + GDR + AL+ G++Y WG+
Sbjct: 263 FNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVV-GDRHTLALTQLGYIYAWGK 321
Query: 262 ------GFNSTSDVN 270
GF D N
Sbjct: 322 NSYGQLGFRDQQDRN 336
Score = 89 (36.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 40/158 (25%), Positives = 61/158 (38%)
Query: 244 GDR-SAALSAEGHLYTWGR------GFNSTSDVNCXXXX---------XXXXXXXXXXLG 287
GDR + AL+ G++Y WG+ GF D N G
Sbjct: 303 GDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAG 362
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD--GVKVIQIAAGA 345
L T G + + G + DPE P+ + L G ++++ AG
Sbjct: 363 GARSLARTEQGFIYIWGARWLLVRGDPE--FRHHPMLLTENYFPGLRRRGDHLVELIAGP 420
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+H+ TE I WG +GQLGLG+ Q P +++
Sbjct: 421 DHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLD 458
Score = 74 (31.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 32/126 (25%), Positives = 51/126 (40%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL--DGVKVIQIAA 343
+G H L LT G + G + +G L ++ RP + + L ++I++ A
Sbjct: 302 VGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIA 361
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQNR-DTQLEVFCG 400
G S TE I WG L G+ + HP ++ N + R D +E+ G
Sbjct: 362 GGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAG 419
Query: 401 SGFTYA 406
T A
Sbjct: 420 PDHTLA 425
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 174 (66.3 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 45/141 (31%), Positives = 71/141 (50%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG ++ LGHG +P+ + F R + + HS F+S G ++TCG
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCG 202
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKR 210
G G+LGHGD ++ P V + Q+A H++VL +D C VY FG
Sbjct: 203 HGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGC----VYTFGLNTF 258
Query: 211 GQLGVSKDRIRSVSLP-QVTI 230
QLG+ S ++P Q+T+
Sbjct: 259 HQLGIIPPP-SSCNVPRQLTV 278
Score = 49 (22.3 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 20/87 (22%), Positives = 37/87 (42%)
Query: 220 IRSVSLPQVTI--GLHDIEI--VGISANGDRSA---ALSAEGHLYTWGRGFNSTSDVNCX 272
IR ++L +V + G + ++ ++ NG + A+ G ++ W R +S+ C
Sbjct: 374 IRQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICILAMDGAGRVFCW-RSLSSSLK-QCR 431
Query: 273 XXXXXXXXXXXXXLGWNHVLVLTGDGE 299
L N +L +T DGE
Sbjct: 432 WAYPRQVSISDIALNRNEILFVTQDGE 458
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 176 (67.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 52/172 (30%), Positives = 81/172 (47%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG ++ LGHG +P+ + F + + HS F+S G ++TCG
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKR 210
G G+LGHGD ++ P V N Q+A H++VL D C VY FG
Sbjct: 203 HGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGC----VYTFGLNMF 258
Query: 211 GQLGVSKDRIRSVSLP-QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ S ++P Q+ L I+G++A + + E +YT G
Sbjct: 259 HQLGIIPPPA-SCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLG 308
Score = 159 (61.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 54/231 (23%), Positives = 102/231 (44%)
Query: 35 KVWSWGAGTDGQLGTGRL---HDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGG 91
+V++WG T+ LG G H C H + L+ G
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCK-FHSVFLSQK-----G 196
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++ G G G+LGHG+ L P+ V GH + ++A +H+ ++D GC++T G
Sbjct: 197 QVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHN--CSQVAAAKDHTVVLTDDGCVYTFG 254
Query: 152 DGTFGQLGH-GDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
F QLG S + P ++ + + + +A G H+++ ++ + G G
Sbjct: 255 LNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV--YTLGLNGG 312
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
+ G L + + + V+ P+ LH DI + ++A+ + ++ G +Y
Sbjct: 313 QLGHL-LDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIY 362
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 176 (67.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 53/171 (30%), Positives = 80/171 (46%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG ++ LGHG +P+ V F I + HS F+S G ++TCG
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRG 211
G G+LGHGD ++ P V N Q+A H++VL +D C VY FG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGC----VYTFGLNIFH 259
Query: 212 QLGVSKDRIRSVSLPQVTIG--LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ S ++P+ L I+G++A + + E +YT G
Sbjct: 260 QLGLIPPP-SSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMG 308
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V++ G G G+LGHG+ L P+ V GH + ++A +H+ +++ GC++T
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHN--CSQVAAAKDHTVVLTEDGCVYTF 253
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G F QLG S + P ++ + + + +A G H+++ ++ + G
Sbjct: 254 GLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAV--YTMGLNG 311
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
G+ G L + + + V+ P+ LH DI + ++A+ + ++ +G +Y
Sbjct: 312 GQLGYL-LDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIY 362
Score = 116 (45.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLG 199
+D ++T GD T LGHG S P V F ++ Q+ HS+ L +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK--- 195
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY G G G+LG ++ + +P++ GL ++A D + L+ +G +YT+
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQ--TCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 260 G 260
G
Sbjct: 254 G 254
Score = 71 (30.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 289 NHVLVLTGDGEVLMLGGS--HH-GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+H +VLT DG V G + H G++ P + R + + L G +I +AAG
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQM-----QAKYLKGRTIIGVAAGR 293
Query: 346 EHSAVVTENRAIMTWGWGEHGQLG 369
H+ + T A+ T G GQLG
Sbjct: 294 FHTVLWTRE-AVYTMGLNG-GQLG 315
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 115 (45.5 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN--TCDQIHPK-VVNLGDEFQNRDTQ 394
V ++ G+ H+A +T + TWGWG++GQLG G+ +CD HP+ V L E
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCD--HPRRVEQLWAEGLRAQ-- 173
Query: 395 LEVFCGSGFTY 405
EV CG TY
Sbjct: 174 -EVVCGPWNTY 183
Score = 88 (36.0 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
GQLGHG + P+ V G + ++AG HS VSD G L+ G GQLG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGG--VPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 88 (36.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIAC 185
+ +S G H+ ++ G L T G G +GQLGHGD S P +V + + ++ C
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 186 G 186
G
Sbjct: 178 G 178
Score = 80 (33.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGHG S P V + + +A G HS + D G +Y +G + GQLG+
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHS-ACVSD--GGDLYVWGWNESGQLGL 67
Score = 71 (30.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 20/61 (32%), Positives = 24/61 (39%)
Query: 45 GQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFSWGRGSSGQL 104
GQLG G L E A GG H ++ GG ++ WG SGQL
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSD-----GGDLYVWGWNESGQL 65
Query: 105 G 105
G
Sbjct: 66 G 66
Score = 70 (29.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ GQLG + S P++ L + + ++A G SA +S G LY WG
Sbjct: 9 RHGQLGHGS--LESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWG 58
Score = 63 (27.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
V ++CG RH+ L + G ++ +G GK GQLG
Sbjct: 118 VAAVSCGSRHTAALTR---GGELNTWGWGKYGQLG 149
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 179 (68.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 54/171 (31%), Positives = 81/171 (47%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG ++ LGHG +P+ V F I + HS F+S G ++TCG
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRG 211
G G+LGHGD ++ P V N Q+A H++VL +D C VY FG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGC----VYTFGLNIFH 259
Query: 212 QLGVSKDRIRSVSLP-QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ S ++P Q+ L I+G++A + + E +YT G
Sbjct: 260 QLGIIPPP-SSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMG 308
Score = 151 (58.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V++ G G G+LGHG+ L P+ V +GH + ++A +H+ +++ GC++T
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHN--CSQVAAAKDHTVVLTEDGCVYTF 253
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G F QLG S + P ++ + + + +A G H+++ ++ + G
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV--YTMGLNG 311
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
G+ G L + + + V+ P+ LH DI + ++A+ + ++ G +Y
Sbjct: 312 GQLGCL-LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIY 362
Score = 118 (46.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLG 199
+D ++T GD T LGHG S P V F ++ Q+ HS+ L +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK--- 195
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY G G G+LG ++ + +P++ GL+ ++A D + L+ +G +YT+
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQ--TCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 260 G 260
G
Sbjct: 254 G 254
Score = 70 (29.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 289 NHVLVLTGDGEVLMLGGS--HH-GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+H +VLT DG V G + H G++ P + R + + L G +I +AAG
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQI-----QAKYLKGRTIIGVAAGR 293
Query: 346 EHSAVVTENRAIMTWGWGEHGQLG 369
H+ + T A+ T G GQLG
Sbjct: 294 FHTVLWTRE-AVYTMGLNG-GQLG 315
Score = 40 (19.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 290 HVLVLTGDGEVLM-LGGSHHGMLSDP--ER-VSSTRPLS------VALEKVSNLDGVKVI 339
H ++ T + M L G G L DP E+ V++ R +S +AL V+ DG V
Sbjct: 295 HTVLWTREAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVC 354
Query: 340 QIAAG 344
G
Sbjct: 355 VTTRG 359
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 179 (68.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 54/171 (31%), Positives = 81/171 (47%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG ++ LGHG +P+ V F I + HS F+S G ++TCG
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRG 211
G G+LGHGD ++ P V N Q+A H++VL +D C VY FG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGC----VYTFGLNIFH 259
Query: 212 QLGVSKDRIRSVSLP-QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ S ++P Q+ L I+G++A + + E +YT G
Sbjct: 260 QLGIIPPP-SSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMG 308
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V++ G G G+LGHG+ L P+ V +GH + ++A +H+ +++ GC++T
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHN--CSQVAAAKDHTVVLTEDGCVYTF 253
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G F QLG S + P ++ + + + +A G H+++ ++ + G
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV--YTMGLNG 311
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
G+ G L + + + V+ P+ LH DI + ++A+ + ++ G +Y
Sbjct: 312 GQLGCL-LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIY 362
Score = 118 (46.6 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLG 199
+D ++T GD T LGHG S P V F ++ Q+ HS+ L +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK--- 195
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY G G G+LG ++ + +P++ GL+ ++A D + L+ +G +YT+
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQ--TCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 260 G 260
G
Sbjct: 254 G 254
Score = 70 (29.7 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 289 NHVLVLTGDGEVLMLGGS--HH-GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+H +VLT DG V G + H G++ P + R + + L G +I +AAG
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQI-----QAKYLKGRTIIGVAAGR 293
Query: 346 EHSAVVTENRAIMTWGWGEHGQLG 369
H+ + T A+ T G GQLG
Sbjct: 294 FHTVLWTRE-AVYTMGLNG-GQLG 315
Score = 40 (19.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 290 HVLVLTGDGEVLM-LGGSHHGMLSDP--ER-VSSTRPLS------VALEKVSNLDGVKVI 339
H ++ T + M L G G L DP E+ V++ R +S +AL V+ DG V
Sbjct: 295 HTVLWTREAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVC 354
Query: 340 QIAAG 344
G
Sbjct: 355 VTTRG 359
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 179 (68.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 54/171 (31%), Positives = 81/171 (47%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG ++ LGHG +P+ V F I + HS F+S G ++TCG
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRG 211
G G+LGHGD ++ P V N Q+A H++VL +D C VY FG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGC----VYTFGLNIFH 259
Query: 212 QLGVSKDRIRSVSLP-QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ S ++P Q+ L I+G++A + + E +YT G
Sbjct: 260 QLGIIPPP-SSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMG 308
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 42/172 (24%), Positives = 86/172 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V++ G G G+LGHG+ L P+ V +GH + ++A +H+ +++ GC++T
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHN--CSQVAAAKDHTVVLTEDGCVYTF 253
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G F QLG S + P ++ + + + +A G H+++ ++ + G
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAV--YTMGLNG 311
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
G+ G L + + + V+ P+ LH DI + ++A+ + ++ G +Y
Sbjct: 312 GQLGCL-LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIY 362
Score = 118 (46.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLG 199
+D ++T GD T LGHG S P V F ++ Q+ HS+ L +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQK--- 195
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY G G G+LG ++ + +P++ GL+ ++A D + L+ +G +YT+
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQ--TCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 260 G 260
G
Sbjct: 254 G 254
Score = 70 (29.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 289 NHVLVLTGDGEVLMLGGS--HH-GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+H +VLT DG V G + H G++ P + R + + L G +I +AAG
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQI-----QAKYLKGRTIIGVAAGR 293
Query: 346 EHSAVVTENRAIMTWGWGEHGQLG 369
H+ + T A+ T G GQLG
Sbjct: 294 FHTVLWTRE-AVYTMGLNG-GQLG 315
Score = 40 (19.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 290 HVLVLTGDGEVLM-LGGSHHGMLSDP--ER-VSSTRPLS------VALEKVSNLDGVKVI 339
H ++ T + M L G G L DP E+ V++ R +S +AL V+ DG V
Sbjct: 295 HTVLWTREAVYTMGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVC 354
Query: 340 QIAAG 344
G
Sbjct: 355 VTTRG 359
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 174 (66.3 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG ++ LGHG +P+ V F I + HS F+S G ++TCG
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRG 211
G G+LGHGD ++ P V N Q+A H++VL +D C VY FG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGC----VYTFGLNIFH 259
Query: 212 QLGVSKDRIRSVSLPQVTIG--LHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ + ++P+ L I+G++A + + E +YT G
Sbjct: 260 QLGIIPPP-SNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLG 308
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 43/172 (25%), Positives = 86/172 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V++ G G G+LGHG+ L P+ V GH + ++A +H+ +++ GC++T
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHN--CSQVAAAKDHTVVLTEDGCVYTF 253
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G F QLG S+ + P ++ + + + +A G H+++ ++ + G
Sbjct: 254 GLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREAV--YTLGLNG 311
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
G+ G L + + V+ P+ LH DI + ++A+ + ++A G +Y
Sbjct: 312 GQLGHL-LDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARGDIY 362
Score = 117 (46.2 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLG 199
+D ++T GD T LGHG S P V F V+ Q+ HS+ L +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQK--- 195
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY G G G+LG ++ + +P++ GL ++A D + L+ +G +YT+
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQ--TCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 260 G 260
G
Sbjct: 254 G 254
Score = 70 (29.7 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 27/84 (32%), Positives = 40/84 (47%)
Query: 289 NHVLVLTGDGEVLMLGGS--HH-GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+H +VLT DG V G + H G++ P + R + + L G +I +AAG
Sbjct: 239 DHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQM-----QAKYLKGRTIIGVAAGR 293
Query: 346 EHSAVVTENRAIMTWGWGEHGQLG 369
H+ + T A+ T G GQLG
Sbjct: 294 FHTVLWTRE-AVYTLGLNG-GQLG 315
Score = 45 (20.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
+ L L G +L S ++ P +VS+ +AL V+ DG V A G
Sbjct: 305 YTLGLNGGQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTARG 359
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 156 (60.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 57/174 (32%), Positives = 80/174 (45%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G S GQLG G D L P+ + I I+ G HS ++ +G LF CG G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 157 QLG--HG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
QLG H D + +S F V ++ACG +++L + L V GS GQL
Sbjct: 81 QLGLNHTEDVLCFTLCTALSGFC---VQEVACGWDFTIILGRAGL---VLSCGSNAFGQL 134
Query: 214 GVSKDRIRSVSL-PQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
GV + I L PQ + L + + VGI+A + A + G ++ WG G S
Sbjct: 135 GVPQ--ISGPCLIPQKIKQSLKE-KAVGIAAGLRHALAATESGLVFQWGTGMAS 185
Score = 152 (58.6 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 55/220 (25%), Positives = 88/220 (40%)
Query: 40 GAGTDGQLGTGRLHDEXXXXXXXXXXXX--XXXXXACGGAHVLALTSPSSVIGGKVFSWG 97
GA + GQLG G D A GG H +T G++F G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITG-----AGELFVCG 75
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+GQLG D L T G + + ++ GW+ + + +G + +CG FGQ
Sbjct: 76 HNKAGQLGLNHTEDVLCFTLCTALSG--FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQ 133
Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
LG P K+ + + IA G+RH+L + L V+ +G+G KR
Sbjct: 134 LGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGL---VFQWGTGMASRAKRV 190
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
G + + P GL D+++ ++A +L+
Sbjct: 191 HQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSLT 230
Score = 146 (56.5 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 55/194 (28%), Positives = 83/194 (42%)
Query: 181 HQIACGMRHS-LVLLKDCLGNQVYGFGSGKRGQLGVS--KDRIRSVSLPQVTIGLHDIEI 237
+ IAC HS L+L C+ + G+ GQLG+ +D + L V+ DI+
Sbjct: 2 NNIAC---HSHLILRATCVCLK----GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIK- 53
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCXXXXXXXXXXXXXXL--GWN 289
I+ G SA ++ G L+ G G N T DV C + GW+
Sbjct: 54 -SIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWD 112
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
++L G VL G + G L P+ +S P + +K+ K + IAAG H+
Sbjct: 113 FTIILGRAGLVLSCGSNAFGQLGVPQ-ISG--PCLIP-QKIKQSLKEKAVGIAAGLRHAL 168
Query: 350 VVTENRAIMTWGWG 363
TE+ + WG G
Sbjct: 169 AATESGLVFQWGTG 182
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 180 (68.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 54/172 (31%), Positives = 82/172 (47%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG + LGHG +P+ V F + I + HS F+S G ++TCG
Sbjct: 146 EVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCG 205
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKR 210
G G+LGHGD ++ P V + QIA H++VL +D C VY FG
Sbjct: 206 HGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGC----VYTFGLNTF 261
Query: 211 GQLGVSKDRIRSVSLP-QVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ + S+P QV L ++G++A + + E +YT G
Sbjct: 262 HQLGILPPPA-NCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMG 311
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 45/172 (26%), Positives = 87/172 (50%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++ G G G+LGHG+ L P+ V H+ + I+A +H+ +++ GC++T
Sbjct: 199 GQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQ--CSQIAAAKDHTVVLTEDGCVYTF 256
Query: 151 GDGTFGQLGHGDYRSHSS-P--VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G TF QLG ++ S P V+ + + V +A G H+++ K+ + G
Sbjct: 257 GLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEAV--YTMGLNG 314
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
G+ G L + + + V+ P+ LH D+ + +SA+ + ++ G +Y
Sbjct: 315 GQLGYL-LDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTERGDIY 365
Score = 37 (18.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 290 HVLVLTGDGEVLM-LGGSHHGMLSDP--ER-VSSTRPLS------VALEKVSNLDGVKV 338
H ++ T + M L G G L DP E+ V++ R +S V++ VS DG V
Sbjct: 298 HTVLWTKEAVYTMGLNGGQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATV 356
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 133 (51.9 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 54/179 (30%), Positives = 77/179 (43%)
Query: 145 GCLFTCGDGTFGQLGHGD---YRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
G + CG+G GQLG G+ R SPV + V+ I+ G H+LVL K
Sbjct: 42 GNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVD-----ISAGGMHNLVLTKS---G 93
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+Y FG G LG S S P + I L + + ISA SA L +G ++ WG
Sbjct: 94 DIYSFGCNDEGALGRDTSEDGSESKPDL-IDLPG-KALCISAGDSHSACLLEDGRVFAWG 151
Query: 261 RGFNS------TSDVNCXXXXXXXXXXXXXXL--GWNHVLVLTGDGEVLMLGGSHHGML 311
+S T D N + G +H+++LT G+V +G + G L
Sbjct: 152 SFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQL 210
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 71/308 (23%), Positives = 119/308 (38%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+V++WG+ D G D A G H++ LT+ GKVF
Sbjct: 146 RVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTT-----AGKVF 200
Query: 95 SWGRGSSGQLGH-------GE----MVDALYPKPVTFFDGHRYTITHISAGW--NHSGFV 141
+ G GQLG GE D L P + + A W N+ F+
Sbjct: 201 TVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPF-----EAIWATNYCTFM 255
Query: 142 SDSGC--LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
+S ++ G F QL H + + + + K++ IA G H+++L D
Sbjct: 256 RESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTEL-KDIRHIAGGQHHTVILTTDLKC 314
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+ V G + G+LG+ D V P + L + +IV + S A++ +G LY+W
Sbjct: 315 SVV---GRPEYGRLGLG-DVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSW 369
Query: 260 GRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGE--VLMLGGSHHGMLSD-PER 316
G G N+ V H+L+ +G G+ + ++ + P +
Sbjct: 370 GSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPVK 429
Query: 317 VSSTRPLS 324
VS + +S
Sbjct: 430 VSGSSSIS 437
Score = 105 (42.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 53/187 (28%), Positives = 85/187 (45%)
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
L L +V+G V G G GQLG GE D L K ++ G + ISAG H+
Sbjct: 32 LELPKRRTVLGN-VLVCGNGDVGQLGLGE--DILERKRLSPVAGIPDAVD-ISAGGMHNL 87
Query: 140 FVSDSGCLFTCGDGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++ SG +++ G G LG + S S P + K + I+ G HS LL+D
Sbjct: 88 VLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALC-ISAGDSHSACLLED- 144
Query: 198 LGNQVYGFGSGK--RGQLGVSKD--RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+V+ +GS + G +G++ D + + L + T+ I++ D L+
Sbjct: 145 --GRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTV------CCSIASGADHLVILTTA 196
Query: 254 GHLYTWG 260
G ++T G
Sbjct: 197 GKVFTVG 203
Score = 98 (39.6 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H ++LT D + ++G +G L + V ++K++ K++ + G
Sbjct: 301 GQHHTVILTTDLKCSVVGRPEYGRLGLGD-VKDVVEKPTIVKKLTE----KIVSVGCGEV 355
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
S VT + + +WG G + QLG+G+ D++ P VV
Sbjct: 356 CSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV 391
Score = 97 (39.2 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 35/134 (26%), Positives = 54/134 (40%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
++S+G +G LG D + G +H L G+VF+
Sbjct: 95 IYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLED-----GRVFA 149
Query: 96 WG--RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG R S G +G +D P+ +G I++G +H ++ +G +FT G
Sbjct: 150 WGSFRDSHGNMGL--TIDGNKRTPIDLMEGT--VCCSIASGADHLVILTTAGKVFTVGCA 205
Query: 154 TFGQLGHGDYRSHS 167
GQLG RS S
Sbjct: 206 EQGQLGRLSERSIS 219
Score = 73 (30.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFC 399
IA G H+ ++T + G E+G+LGLG+ D + P +V + + + V C
Sbjct: 298 IAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVK-----KLTEKIVSVGC 352
Query: 400 GSGFTYAIS 408
G +YA++
Sbjct: 353 GEVCSYAVT 361
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 151 (58.2 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 54/207 (26%), Positives = 89/207 (42%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+H ++ G + T G G GQLG G+ P VS + ++V Q G H++ L
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLS 83
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSA 252
K QVY FG G LG R SV ++ G +++ +V +SA +AAL+
Sbjct: 84 KS---GQVYSFGCNDEGALG----RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTD 136
Query: 253 EGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL---------GWNHVLVLTGDGEVLML 303
+G ++ WG ++ + L G +H+++LT DG++ L
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKV 330
G G L + + R LE++
Sbjct: 197 GCGEQGQLGRVPELFANRGGRQGLERL 223
Score = 139 (54.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V+ + + AG H+ +S SG +++
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPED----VVQAEAGGMHTVCLSKSGQVYS 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L D +V+ +GS +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDD---GRVFLWGSFR 147
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G +G+ + +S+ QV + D+ +V +++ D L+A+G LYT G G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL---DVPVVKVASGNDHLVMLTADGDLYTLGCG 199
Score = 124 (48.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 54/205 (26%), Positives = 86/205 (41%)
Query: 15 ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC 74
A+ + K K+ + V + G G GQLG G E A
Sbjct: 16 AIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEA- 74
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHIS 132
GG H + L+ G+V+S+G G LG V+ + P V + + +S
Sbjct: 75 GGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQVS 125
Query: 133 AGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRH 189
AG +H+ ++D G +F G G +G + S PV+V ++ V ++A G H
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDH 183
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLG 214
++L D +Y G G++GQLG
Sbjct: 184 LVMLTAD---GDLYTLGCGEQGQLG 205
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + ++V A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGEN-VMERKKPAL-VSIPE-DVVQAEAGGMHTVCLSKSGQVYSFGC 93
Query: 261 -------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG--SHHGML 311
R + G +H LT DG V + G ++G++
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI 153
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L+ V V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMKKSMV-PVQVQLD-------VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 171 (65.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG HS ++ +++ G
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGYHSLALTAKSQVYSWG 584
Query: 152 DGTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHSLVLL 194
TFGQLGH D+ + + P K+SS V IA G +SL L+
Sbjct: 585 SNTFGQLGHSDFPT-TVPRLAKISS--ENGVWSIAAGRDYSLFLV 626
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T +G M G + G +++ + V P+S+A + S L V+++Q+A G EH
Sbjct: 102 HSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEH 161
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 162 TLALSISREI--WAWGTGCQLGLITTAFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 215
Query: 407 ISRHCLPSQ 415
+ + CLPSQ
Sbjct: 216 LVQ-CLPSQ 223
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ--LGHGDYRSHSSPVKV-----SSFVN 177
+Y IT ++ G HSG V+D+G + G+ + GQ + + Y +PV + S +
Sbjct: 91 QYVIT-VATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLA 149
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ Q+ACG H+L L + +++ +G+G QLG+ V+ PQ L +
Sbjct: 150 VRILQLACGEEHTLAL---SISREIWAWGTGC--QLGLITTAF-PVTKPQKVEHLAGRVV 203
Query: 238 VGISANGDRSAAL 250
+ ++ S AL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 100 (40.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 40/135 (29%), Positives = 56/135 (41%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-----YT 127
A G H A+T G + WG S+GQ P PV+ D
Sbjct: 97 ATGSFHSGAVTD-----NGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVR 151
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
I ++ G H+ +S S ++ G G QLG + P KV + V Q+ACG
Sbjct: 152 ILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVACG 209
Query: 187 MRHSLVLLKDCLGNQ 201
HSL L++ CL +Q
Sbjct: 210 AFHSLALVQ-CLPSQ 223
Score = 91 (37.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-----LDGKEVIHLEAGGYHSLALTAKSQVY 581
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+WG GQLG + + P++ + E
Sbjct: 582 SWGSNTFGQLGHSDFPTTV-PRLAKISSE 609
Score = 87 (35.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 524 LRTEVWTWGKGKEGQLGHG-DVLPRLQ-PLCVKCLDGKEVIHLEAGGYHSLALTAKSQVY 581
Query: 258 TWG 260
+WG
Sbjct: 582 SWG 584
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 170 EIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/113 (38%), Positives = 54/113 (47%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+VWSWG G DGQLG G L A G H LALT+ S +VF
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQS-----QVF 604
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
SWG +SGQLGH E +P+ DG R + I AG H+ ++D C+
Sbjct: 605 SWGCNTSGQLGHMES-PTTFPQLTKLSDGIR--VWDIGAGLQHTLLLADGDCI 654
Score = 154 (59.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWG+G GQLGHG+++ L P V +G + ++AG +HS ++ +F+ G
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKE--VLKVAAGAHHSLALTAQSQVFSWG 607
Query: 152 DGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-DCLGNQVYGFG 206
T GQLGH + + K+S + V I G++H+L+L DC+ +Y G
Sbjct: 608 CNTSGQLGHMESPTTFPQLTKLSDGIR--VWDIGAGLQHTLLLADGDCIQPILYYSG 662
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/218 (27%), Positives = 92/218 (42%)
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG-HLYTWGR- 261
G SG+RG L K S + +V + ++ +A G R L EG +Y++G
Sbjct: 10 GDSSGERGLLHTWKGYSYSTAPERVLLSRPVLQ----AALGARHGVLLVEGGQVYSFGEL 65
Query: 262 --GFNSTSDVN-CXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGM--LSDPER 316
N TS G H V+T DG V M G + HG L
Sbjct: 66 PWKQNQTSSAEPILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSV 125
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+ + P+ V + + VK++++A G +H+ ++ + W WG QLGL +
Sbjct: 126 IPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEV--WAWGSGCQLGLNTSTFP 183
Query: 377 I-HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLP 413
+ P+ V D R L+V CGS + A+ R CLP
Sbjct: 184 VWKPQKV---DHLSGRHV-LQVACGSAHSVALVR-CLP 216
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 54/174 (31%), Positives = 76/174 (43%)
Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEV 300
S GD S G L+TW +G++ ++ LG H ++L G+V
Sbjct: 7 SGEGDSSGE---RGLLHTW-KGYSYST---APERVLLSRPVLQAALGARHGVLLVEGGQV 59
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + + SS P+ LE V L +V+ +AAG+ HS VVTE+ + W
Sbjct: 60 YSFGE----LPWKQNQTSSAEPI---LEAV--LSEQRVVFVAAGSAHSGVVTEDGGVHMW 110
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGD-EFQNRDTQ--LEVFCGSGFTYAIS-RH 410
G HGQ GL +P V + D E T LEV CG T A+S +H
Sbjct: 111 GENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKH 164
Score = 120 (47.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 37/108 (34%), Positives = 51/108 (47%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+++ G G GQLGHGD P V S K V ++A G HSL L +QV+ +G
Sbjct: 551 VWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQ---SQVFSWG 607
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
GQLG + + PQ+T I + I A G + L A+G
Sbjct: 608 CNTSGQLGHMES---PTTFPQLTKLSDGIRVWDIGA-GLQHTLLLADG 651
Score = 98 (39.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +P + V +L+G +V+++AAGA HS +T +
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQP-----DCVKSLNGKEVLKVAAGAHHSLALTAQSQVF 604
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+WG GQLG + P++ L D
Sbjct: 605 SWGCNTSGQLGHMES-PTTFPQLTKLSD 631
Score = 89 (36.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 39/132 (29%), Positives = 53/132 (40%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-----YT 127
A G AH +T GG V WG GQ G + P PV D
Sbjct: 92 AAGSAHSGVVTED----GG-VHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVK 146
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACG 186
I ++ G H+ +S ++ G G QLG P KV ++V Q+ACG
Sbjct: 147 ILEVACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVLQVACG 204
Query: 187 MRHSLVLLKDCL 198
HS+ L++ CL
Sbjct: 205 SAHSVALVR-CL 215
Score = 87 (35.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-------NV 180
+ ++AG HSG V++ G + G+ GQ G +P V ++ +
Sbjct: 88 VVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKI 147
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
++ACG +H+L L ++V+ +GSG QLG++ V PQ L ++ +
Sbjct: 148 LEVACGDQHTLALSAK---HEVWAWGSGC--QLGLNTSTF-PVWKPQKVDHLSGRHVLQV 201
Query: 241 SANGDRSAAL 250
+ S AL
Sbjct: 202 ACGSAHSVAL 211
Score = 84 (34.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G G+ GQLG D + + P L+ E++ ++A S AL+A+ ++
Sbjct: 547 LQTEVWSWGQGQDGQLGHG-DLLPRLQ-PDCVKSLNGKEVLKVAAGAHHSLALTAQSQVF 604
Query: 258 TWG 260
+WG
Sbjct: 605 SWG 607
Score = 50 (22.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/48 (29%), Positives = 18/48 (37%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
+VW+WG+G L T ACG AH +AL
Sbjct: 165 EVWAWGSGCQLGLNTSTF-PVWKPQKVDHLSGRHVLQVACGSAHSVAL 211
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 170 (64.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 38/104 (36%), Positives = 60/104 (57%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG +HS ++ +++ G
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGSHSLALTAKSQVYSWG 578
Query: 152 DGTFGQLGHGDYRSHSSPV-KVSSFVNKNVHQIACGMRHSLVLL 194
TFGQLGH ++ + + KVSS V +A G +SL L+
Sbjct: 579 SNTFGQLGHSEFPTTVPRLSKVSS--ENGVWSVAAGQDYSLFLV 620
Score = 128 (50.1 bits), Expect = 0.00018, P = 0.00018
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+VW+WG G +GQLG G + GG+H LALT+ S +V+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS-----QVY 575
Query: 95 SWGRGSSGQLGHGEMVDALYPK--PVTFFDGHRYTITHISAGWNHSGFVSDS 144
SWG + GQLGH E + P+ V+ +G + ++AG ++S F+ D+
Sbjct: 576 SWGSNTFGQLGHSEFPTTV-PRLSKVSSENG----VWSVAAGQDYSLFLVDT 622
Score = 123 (48.4 bits), Expect = 0.00064, P = 0.00064
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T G V M G + G +++ + V P+S++ + S V+++Q+A G EH
Sbjct: 102 HSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEH 161
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 162 TLALSLSREI--WAWGTGCQLGLITTTFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 215
Query: 407 ISRHCLPSQ 415
+ + CLP Q
Sbjct: 216 LVQ-CLPPQ 223
Score = 99 (39.9 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 40/137 (29%), Positives = 58/137 (42%)
Query: 76 GAHVLALTSPSSVIG-----GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR----- 125
G HV+ + + S G G V+ WG ++GQ P PV+ D
Sbjct: 90 GHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLA 149
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIA 184
I ++ G H+ +S S ++ G G QLG + P KV + V Q+A
Sbjct: 150 VRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVA 207
Query: 185 CGMRHSLVLLKDCLGNQ 201
CG HSL L++ CL Q
Sbjct: 208 CGAFHSLALVQ-CLPPQ 223
Score = 91 (37.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-----LDGKEVIHLEAGGSHSLALTAKSQVY 575
Query: 359 TWGWGEHGQLG 369
+WG GQLG
Sbjct: 576 SWGSNTFGQLG 586
Score = 90 (36.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 518 LRTEVWTWGKGKEGQLGHG-DVLPRLQ-PLCVKCLDGKEVIHLEAGGSHSLALTAKSQVY 575
Query: 258 TWG 260
+WG
Sbjct: 576 SWG 578
Score = 43 (20.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 170 EIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 170 (64.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG HS ++ +++ G
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGYHSLALTAKSQVYSWG 584
Query: 152 DGTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHSLVLL 194
TFGQLGH D+ + + P K+SS V +A G +SL L+
Sbjct: 585 SNTFGQLGHSDFPT-TVPRLAKISS--ENGVWSVAAGRDYSLFLV 626
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T +G M G + G +++ + V P+S+A + S L V+++Q+A G EH
Sbjct: 102 HSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACGEEH 161
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 162 TLALSISREI--WAWGTGCQLGLITTAFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 215
Query: 407 ISRHCLPSQ 415
+ + CLPSQ
Sbjct: 216 LVQ-CLPSQ 223
Score = 105 (42.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ--LGHGDYRSHSSPVKV-----SSFVN 177
+Y +T ++ G HSG V+D+G + G+ + GQ + + Y +PV + S +
Sbjct: 91 QYVVT-VATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLA 149
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ Q+ACG H+L L + +++ +G+G QLG+ V+ PQ L +
Sbjct: 150 VRILQLACGEEHTLAL---SISREIWAWGTGC--QLGLITTAF-PVTKPQKVEHLAGRVV 203
Query: 238 VGISANGDRSAAL 250
+ ++ S AL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 100 (40.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 40/135 (29%), Positives = 56/135 (41%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-----YT 127
A G H A+T G + WG S+GQ P PV+ D
Sbjct: 97 ATGSFHSGAVTD-----NGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVR 151
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
I ++ G H+ +S S ++ G G QLG + P KV + V Q+ACG
Sbjct: 152 ILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVACG 209
Query: 187 MRHSLVLLKDCLGNQ 201
HSL L++ CL +Q
Sbjct: 210 AFHSLALVQ-CLPSQ 223
Score = 91 (37.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-----LDGKEVIHLEAGGYHSLALTAKSQVY 581
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+WG GQLG + + P++ + E
Sbjct: 582 SWGSNTFGQLGHSDFPTTV-PRLAKISSE 609
Score = 87 (35.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 524 LRTEVWTWGKGKEGQLGHG-DVLPRLQ-PLCVKCLDGKEVIHLEAGGYHSLALTAKSQVY 581
Query: 258 TWG 260
+WG
Sbjct: 582 SWG 584
Score = 43 (20.2 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 170 EIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 73/288 (25%), Positives = 115/288 (39%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+H ++ G + T G G GQLG G+ P VS + ++V Q G H++ L
Sbjct: 43 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLS 100
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSA 252
K QVY FG G LG R SV ++ G +++ +V +SA +AAL+
Sbjct: 101 KS---GQVYSFGCNDEGALG----RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTD 153
Query: 253 EGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL---------GWNHVLVLTGDGEVLML 303
+G ++ WG ++ + L G +H+++LT DG++ L
Sbjct: 154 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 213
Query: 304 GGSHHGMLSD-PE-------RVSSTR---PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G G L PE R R P V L+ + V+ GA + ++
Sbjct: 214 GCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 273
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
+ +G + QLG T P+ NL F+N F G
Sbjct: 274 HEGHVYGFGLSNYHQLGTPGTESCFIPQ--NL-TSFKNSTKSWVGFSG 318
Score = 139 (54.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V+ + + AG H+ +S SG +++
Sbjct: 52 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPED----VVQAEAGGMHTVCLSKSGQVYS 107
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L D +V+ +GS +
Sbjct: 108 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDD---GRVFLWGSFR 164
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G +G+ + +S+ QV + D+ +V +++ D L+A+G LYT G G
Sbjct: 165 DNNGVIGLLEPMKKSMVPVQVQL---DVPVVKVASGNDHLVMLTADGDLYTLGCG 216
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + ++V A G + LS G +Y++G
Sbjct: 54 VLTLGQGDVGQLGLGEN-VMERKKPAL-VSIPE-DVVQAEAGGMHTVCLSKSGQVYSFGC 110
Query: 261 -------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG--SHHGML 311
R + G +H LT DG V + G ++G++
Sbjct: 111 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI 170
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L+ V V+++A+G +H ++T + + T G GE GQLG
Sbjct: 171 GLLEPMKKSMV-PVQVQLD-------VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 222
Query: 370 -----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
N + + PK V L + + FCG+ FT+AIS
Sbjct: 223 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 273
Score = 119 (46.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 51/184 (27%), Positives = 79/184 (42%)
Query: 36 VWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVFS 95
V + G G GQLG G E A GG H + L+ G+V+S
Sbjct: 54 VLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEA-GGMHTVCLSK-----SGQVYS 107
Query: 96 WGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD- 152
+G G LG V+ + P V + + +SAG +H+ ++D G +F G
Sbjct: 108 FGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQVSAGDSHTAALTDDGRVFLWGSF 163
Query: 153 -GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +G + S PV+V ++ V ++A G H ++L D +Y G G++
Sbjct: 164 RDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDHLVMLTAD---GDLYTLGCGEQ 218
Query: 211 GQLG 214
GQLG
Sbjct: 219 GQLG 222
Score = 59 (25.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
++ +G V G S++ L P S P ++ K S V + G H+ +
Sbjct: 272 ISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVG---FSGGQHHTVCMDS 328
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQ 376
+ G E+G+LGLG ++
Sbjct: 329 EGKAYSLGRAEYGRLGLGEGAEE 351
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 101/419 (24%), Positives = 159/419 (37%)
Query: 13 KSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXX 72
+ AL + K K+ + V + G G GQLG G E
Sbjct: 14 EDALPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDIVQAE 73
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITH 130
A GG H + L+ G+V+S+G G LG V+ + P V + +
Sbjct: 74 A-GGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQ 123
Query: 131 ISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGM 187
+SAG +H+ +++ G +F G G +G + S PV+V ++ V ++A G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LSMPVVKVASGN 181
Query: 188 RHSLVLLKD----CLGNQVYG-FG------SGKRGQLGVSKDRI-RSVSLPQVTIGLHDI 235
H ++L D LG+ G G + + G+ G+ + + + V L H +
Sbjct: 182 DHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH-V 240
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV----NCXXXXXXXXXXXXXX 285
+ A+S+EGH+Y +G G T N
Sbjct: 241 RFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFS 300
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H + + +G LG + +G L E SV +S L V +A GA
Sbjct: 301 GGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEK---SVPT-LISRLPAVS--SVACGA 354
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
VT++ + WG G + QLG G D P V G + +NR L V G T
Sbjct: 355 SVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSP-VEMTGKQLENRMV-LSVSSGGQHT 411
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 41/178 (23%), Positives = 72/178 (40%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG A++S G V+ +G + QLG P+ +T F + S
Sbjct: 247 CGAYFTFAISSE-----GHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSG 301
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLV 192
G +H+ + G ++ G +G+LG G+ S P +S V +ACG
Sbjct: 302 GQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRL--PAVSSVACGASVGYA 359
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ KD +V+ +G G QLG ++ + L + ++ +S+ G + L
Sbjct: 360 VTKD---GRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLL 414
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 58/231 (25%), Positives = 97/231 (41%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + +IV A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGEN-VMERKKPAL-VPIPE-DIVQAEAGGMHTVCLSKSGQVYSFGC 93
Query: 261 -------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG--SHHGML 311
R + G +H LT DG V + G ++G++
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI 153
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L + V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMKKSMV-PVQVQLS-------MPVVKVASGNDHLVMLTADGELYTLGSGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
N + + PK V L + + FCG+ FT+AIS
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 169 (64.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG HS ++ +++ G
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGYHSLALTAKSQVYSWG 588
Query: 152 DGTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHSLVLL 194
TFGQLGH D+ + + P KV+S V +A G +SL L+
Sbjct: 589 SNTFGQLGHSDFPT-TVPRLAKVNS--ENGVWSVAAGQDYSLFLV 630
Score = 136 (52.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T G V M G + G +++ V P+S++ + S L V+++Q+A G EH
Sbjct: 107 HTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEH 166
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 167 TLALSLSREI--WAWGTGCQLGLITTTFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 220
Query: 407 ISRHCLPSQ 415
+ + CLPSQ
Sbjct: 221 LVQ-CLPSQ 228
Score = 113 (44.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV--TFFDGHRYTITH 130
A G H + LT G+V+S+G E + P+ + G +Y +T
Sbjct: 47 ALGVKHGVLLTEVFKPSDGEVYSFGTLP----WRSEPAETCPSNPILESALVG-QYVVT- 100
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQ--LGHGDYRSHSSPVKVSS-----FVNKNVHQI 183
++ G H+G V+DSG ++ G+ + GQ + + Y +PV +S + + Q+
Sbjct: 101 VATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQL 160
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
ACG H+L L L +++ +G+G QLG+ V+ PQ L ++ ++
Sbjct: 161 ACGEEHTLAL---SLSREIWAWGTGC--QLGLITTTF-PVTKPQKVEHLAGRVVLQVACG 214
Query: 244 GDRSAAL 250
S AL
Sbjct: 215 AFHSLAL 221
Score = 105 (42.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 41/135 (30%), Positives = 57/135 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-----YT 127
A G H A+T G V+ WG S+GQ P PV+ D
Sbjct: 102 ATGSFHTGAVTD-----SGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVR 156
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
I ++ G H+ +S S ++ G G QLG + P KV + V Q+ACG
Sbjct: 157 ILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACG 214
Query: 187 MRHSLVLLKDCLGNQ 201
HSL L++ CL +Q
Sbjct: 215 AFHSLALVQ-CLPSQ 228
Score = 90 (36.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-----LDGKEVIHLEAGGYHSLALTAKSQVY 585
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+WG GQLG + + P++ + E
Sbjct: 586 SWGSNTFGQLGHSDFPTTV-PRLAKVNSE 613
Score = 87 (35.7 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 528 LRTEVWTWGKGKEGQLGHG-DVLPRLQ-PLCVKCLDGKEVIHLEAGGYHSLALTAKSQVY 585
Query: 258 TWG 260
+WG
Sbjct: 586 SWG 588
Score = 82 (33.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 35/147 (23%), Positives = 61/147 (41%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH------SSPVKVSSFVNKNV 180
T+ H + G H +++ +F DG G +RS S+P+ S+ V + V
Sbjct: 42 TVLHAALGVKHGVLLTE---VFKPSDGEVYSFGTLPWRSEPAETCPSNPILESALVGQYV 98
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI----RSVSLPQV-TIGLHDI 235
+A G H+ + + VY +G GQ V+ VS+ T L +
Sbjct: 99 VTVATGSFHTGAVTDSGV---VYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAV 155
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG 262
I+ ++ + + ALS ++ WG G
Sbjct: 156 RILQLACGEEHTLALSLSREIWAWGTG 182
Score = 43 (20.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 175 EIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 221
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 66/261 (25%), Positives = 106/261 (40%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+H ++ G + T G G GQLG G+ P VS + ++V Q G H++ L
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLS 83
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSA 252
K QVY FG G LG R SV ++ G +++ +V +SA +AAL+
Sbjct: 84 KS---GQVYSFGCNDEGALG----RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTD 136
Query: 253 EGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL---------GWNHVLVLTGDGEVLML 303
+G ++ WG ++ + L G +H+++LT DG++ L
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 304 GGSHHGMLSD-PE-------RVSSTR---PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G G L PE R R P V L+ + V+ GA + ++
Sbjct: 197 GCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Query: 353 ENRAIMTWGWGEHGQLGLGNT 373
+ +G + QLG T
Sbjct: 257 HEGHVYGFGLSNYHQLGTPGT 277
Score = 139 (54.0 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V+ + + AG H+ +S SG +++
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPED----VVQAEAGGMHTVCLSKSGQVYS 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L D +V+ +GS +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDD---GRVFLWGSFR 147
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G +G+ + +S+ QV + D+ +V +++ D L+A+G LYT G G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL---DVPVVKVASGNDHLVMLTADGDLYTLGCG 199
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + ++V A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGEN-VMERKKPAL-VSIPE-DVVQAEAGGMHTVCLSKSGQVYSFGC 93
Query: 261 -------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG--SHHGML 311
R + G +H LT DG V + G ++G++
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI 153
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L+ V V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMKKSMV-PVQVQLD-------VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
N + + PK V L + + FCG+ FT+AIS
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 54/205 (26%), Positives = 86/205 (41%)
Query: 15 ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC 74
A+ + K K+ + V + G G GQLG G E A
Sbjct: 16 AIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEA- 74
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHIS 132
GG H + L+ G+V+S+G G LG V+ + P V + + +S
Sbjct: 75 GGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQVS 125
Query: 133 AGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRH 189
AG +H+ ++D G +F G G +G + S PV+V ++ V ++A G H
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDH 183
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLG 214
++L D +Y G G++GQLG
Sbjct: 184 LVMLTAD---GDLYTLGCGEQGQLG 205
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 100/417 (23%), Positives = 158/417 (37%)
Query: 15 ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC 74
A+ + K K+ + V + G G GQLG G E A
Sbjct: 16 AIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEA- 74
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHIS 132
GG H + L+ G+V+S+G G LG V+ + P V + + +S
Sbjct: 75 GGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQVS 125
Query: 133 AGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRH 189
AG +H+ ++D G +F G G +G + S PV+V ++ V ++A G H
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDH 183
Query: 190 SLVLLKD----CLGNQVYG-FG------SGKRGQLGVSKDRI-RSVSLPQVTIGLHDIEI 237
++L D LG G G + + G+ G+ + + + V L H +
Sbjct: 184 LVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH-VRF 242
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDV----NCXXXXXXXXXXXXXXLG 287
+ A+S EGH+Y +G G T N G
Sbjct: 243 QDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG 302
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+H + + +G+ LG + +G L E S+ +S L V +A GA
Sbjct: 303 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEK---SIPT-LISRLPAVS--SVACGASV 356
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
VT++ + WG G + QLG G D P V +G + +NR L V G T
Sbjct: 357 GYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMMGKQLENR-VVLSVSSGGQHT 411
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + ++V A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGEN-VMERKKPAL-VSIPE-DVVQAEAGGMHTVCLSKSGQVYSFGC 93
Query: 261 -------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG--SHHGML 311
R + G +H LT DG V + G ++G++
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI 153
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L+ V V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMKKSMV-PVQVQLD-------VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
N + + PK V L + + FCG+ FT+AIS
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/161 (23%), Positives = 67/161 (41%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+ +G + QLG P+ +T F + S G +H+ + G ++
Sbjct: 259 GHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G +G+LG G+ S P +S V +ACG + KD +V+ +G G
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAVTKD---GRVFAWGMGT 373
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
QLG +D + + L + ++ +S+ G + L
Sbjct: 374 NYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLL 414
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 168 (64.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 37/104 (35%), Positives = 62/104 (59%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG HS ++ +++ G
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGYHSLALTAKSQVYSWG 578
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLL 194
TFGQLGH D+ + + P +++ ++N V +A G +SL L+
Sbjct: 579 SNTFGQLGHSDFPT-TVP-RLAKMNSENGVWSVAAGQDYSLFLV 620
Score = 136 (52.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T G V M G + G +++ + V P+S++ + S L V+++Q+A G EH
Sbjct: 102 HSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEH 161
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 162 TLALSISREI--WAWGTGCQLGLITTTFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 215
Query: 407 ISRHCLPSQ 415
+ + CLPSQ
Sbjct: 216 LVQ-CLPSQ 223
Score = 107 (42.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/133 (26%), Positives = 65/133 (48%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ--LGHGDYRSHSSPVKVSS-----FVN 177
+Y +T ++ G HSG V++SG ++ G+ + GQ + + Y +PV +S +
Sbjct: 91 QYVVT-VATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLA 149
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ Q+ACG H+L L + +++ +G+G QLG+ V+ PQ L +
Sbjct: 150 VRILQLACGEEHTLAL---SISREIWAWGTGC--QLGLITTTF-PVTKPQKVEHLAGRVV 203
Query: 238 VGISANGDRSAAL 250
+ ++ S AL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 104 (41.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 41/135 (30%), Positives = 57/135 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-----YT 127
A G H A+T G V+ WG S+GQ P PV+ D
Sbjct: 97 ATGSFHSGAVTE-----SGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVR 151
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
I ++ G H+ +S S ++ G G QLG + P KV + V Q+ACG
Sbjct: 152 ILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACG 209
Query: 187 MRHSLVLLKDCLGNQ 201
HSL L++ CL +Q
Sbjct: 210 AFHSLALVQ-CLPSQ 223
Score = 90 (36.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKC-----LDGKEVIHLEAGGYHSLALTAKSQVY 575
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+WG GQLG + + P++ + E
Sbjct: 576 SWGSNTFGQLGHSDFPTTV-PRLAKMNSE 603
Score = 85 (35.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 518 LRTEVWTWGKGKDGQLGHG-DVLPRLQ-PLCVKCLDGKEVIHLEAGGYHSLALTAKSQVY 575
Query: 258 TWG 260
+WG
Sbjct: 576 SWG 578
Score = 82 (33.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 32/141 (22%), Positives = 60/141 (42%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T+ + G H +++ G +++ G T SSP+ ++ V + V +A G
Sbjct: 42 TVLQAALGVKHGVLLTEDGEVYSFG--TLPWRSEPAELCPSSPILENALVGQYVVTVATG 99
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI----RSVSLPQV-TIGLHDIEIVGIS 241
HS + + + VY +G GQ V+ + VS+ T L + I+ ++
Sbjct: 100 SFHSGAVTESGV---VYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLA 156
Query: 242 ANGDRSAALSAEGHLYTWGRG 262
+ + ALS ++ WG G
Sbjct: 157 CGEEHTLALSISREIWAWGTG 177
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 170 EIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 168 (64.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 38/104 (36%), Positives = 60/104 (57%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + H+ AG +HS ++ +++ G
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIHLEAGGSHSLALTAKSQVYSWG 578
Query: 152 DGTFGQLGHGDYRSHSSPV-KVSSFVNKNVHQIACGMRHSLVLL 194
TFGQLGH ++ + + KVSS V +A G +SL L+
Sbjct: 579 SNTFGQLGHSEFPTTVPRLSKVSS--ESGVWSVAAGHGYSLFLV 620
Score = 134 (52.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T G V M G + G +++ + VS P+S++ + S L V+++Q+A G EH
Sbjct: 102 HSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEH 161
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 162 TLALSISREI--WAWGTGCQLGLITTTFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 215
Query: 407 ISRHCLPSQ 415
+ + CLP Q
Sbjct: 216 LVQ-CLPPQ 223
Score = 126 (49.4 bits), Expect = 0.00030, P = 0.00030
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+VW+WG G +GQLG G + GG+H LALT+ S +V+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKS-----QVY 575
Query: 95 SWGRGSSGQLGHGEMVDALYPK--PVTFFDGHRYTITHISAGWNHSGFVSDS 144
SWG + GQLGH E + P+ V+ G + ++AG +S F+ D+
Sbjct: 576 SWGSNTFGQLGHSEFPTTV-PRLSKVSSESG----VWSVAAGHGYSLFLVDT 622
Score = 113 (44.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ--LGHGDYRSHSSPVKVSS-----F 175
GH + +T ++ G HSG V++SG ++ G+ GQ + + Y S SPV +S
Sbjct: 90 GH-HVVT-VATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPL 147
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q+ACG H+L L + +++ +G+G QLG+ V+ PQ L
Sbjct: 148 LAVRILQLACGEEHTLAL---SISREIWAWGTGC--QLGLITTTF-PVTKPQKVEHLAGR 201
Query: 236 EIVGISANGDRSAAL 250
++ ++ S AL
Sbjct: 202 VVLQVACGAFHSLAL 216
Score = 100 (40.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 40/137 (29%), Positives = 58/137 (42%)
Query: 76 GAHVLALTSPSSVIG-----GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR----- 125
G HV+ + + S G G V+ WG ++GQ P PV+ D
Sbjct: 90 GHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLA 149
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIA 184
I ++ G H+ +S S ++ G G QLG + P KV + V Q+A
Sbjct: 150 VRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVA 207
Query: 185 CGMRHSLVLLKDCLGNQ 201
CG HSL L++ CL Q
Sbjct: 208 CGAFHSLALVQ-CLPPQ 223
Score = 91 (37.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-----LDGKEVIHLEAGGSHSLALTAKSQVY 575
Query: 359 TWGWGEHGQLG 369
+WG GQLG
Sbjct: 576 SWGSNTFGQLG 586
Score = 90 (36.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 518 LRTEVWTWGKGKEGQLGHG-DVLPRLQ-PLCVKCLDGKEVIHLEAGGSHSLALTAKSQVY 575
Query: 258 TWG 260
+WG
Sbjct: 576 SWG 578
Score = 86 (35.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/141 (23%), Positives = 59/141 (41%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T+ + G H +++ G +++ G T SSP+ S+ V +V +A G
Sbjct: 42 TVLQAALGVKHGVLLTEDGEVYSFG--TLPWKSEAAEICPSSPLLESALVGHHVVTVATG 99
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-----QVTIGLHDIEIVGIS 241
HS + + + VY +G GQ V+ + S P T L + I+ ++
Sbjct: 100 SFHSGAVTESGV---VYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLA 156
Query: 242 ANGDRSAALSAEGHLYTWGRG 262
+ + ALS ++ WG G
Sbjct: 157 CGEEHTLALSISREIWAWGTG 177
Score = 71 (30.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA-GAEHSAVVTENRA-IMTWG 361
GGS LS P +S P L K + + V+ E A++ R + TWG
Sbjct: 471 GGSRR--LSLPGLLSQVSPR--LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWG 526
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGD 386
G+ GQLG G+ ++ P V D
Sbjct: 527 KGKEGQLGHGDVLPRLQPLCVKCLD 551
Score = 58 (25.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H L LT +V G + G L E +T P L KVS+ GV +AAG
Sbjct: 561 GGSHSLALTAKSQVYSWGSNTFGQLGHSE-FPTTVP---RLSKVSSESGVW--SVAAGHG 614
Query: 347 HSAVVTE 353
+S + +
Sbjct: 615 YSLFLVD 621
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 170 EIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 151 (58.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 54/207 (26%), Positives = 89/207 (42%)
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+H ++ G + T G G GQLG G+ P VS + ++V Q G H++ L
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS--IPEDVVQAEAGGMHTVCLS 83
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSA 252
K QVY FG G LG R SV ++ G +++ +V +SA +AAL+
Sbjct: 84 KS---GQVYSFGCNDEGALG----RDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTD 136
Query: 253 EGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXL---------GWNHVLVLTGDGEVLML 303
+G ++ WG ++ + L G +H+++LT DG++ L
Sbjct: 137 DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTL 196
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKV 330
G G L + + R LE++
Sbjct: 197 GCGEQGQLGRVPELFANRGGRQGLERL 223
Score = 139 (54.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V+ + + AG H+ +S SG +++
Sbjct: 35 GLVLTLGQGDVGQLGLGENVMERKKPALVSIPED----VVQAEAGGMHTVCLSKSGQVYS 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L D +V+ +GS +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDD---GRVFLWGSFR 147
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G +G+ + +S+ QV + D+ +V +++ D L+A+G LYT G G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL---DVPVVKVASGNDHLVMLTADGDLYTLGCG 199
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 58/231 (25%), Positives = 98/231 (42%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + ++V A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGEN-VMERKKPAL-VSIPE-DVVQAEAGGMHTVCLSKSGQVYSFGC 93
Query: 261 -------RGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG--SHHGML 311
R + G +H LT DG V + G ++G++
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVI 153
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L+ V V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMKKSMV-PVQVQLD-------VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
N + + PK V L + + FCG+ FT+AIS
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 66/265 (24%), Positives = 107/265 (40%)
Query: 15 ALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXAC 74
A+ + K K+ + V + G G GQLG G E A
Sbjct: 16 AIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEA- 74
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHIS 132
GG H + L+ G+V+S+G G LG V+ + P V + + +S
Sbjct: 75 GGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQVS 125
Query: 133 AGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRH 189
AG +H+ ++D G +F G G +G + S PV+V ++ V ++A G H
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDH 183
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR--- 246
++L D +Y G G++GQLG + + Q L + V + + G R
Sbjct: 184 LVMLTAD---GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 247 -----------SAALSAEGHLYTWG 260
+ A+S EGH+Y +G
Sbjct: 241 RFQDAFCGAYFTFAISHEGHVYGFG 265
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 154 (59.3 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWGRG GQLGHG+++ L P V DG + +SAG +HS ++ +++ G
Sbjct: 522 EVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKE--VIQLSAGGHHSLALTAKSQVYSWG 579
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
FGQLGH + S ++ +++ V A G +SL L
Sbjct: 580 SNIFGQLGHTN--SPTTVPRLAKVCGDGVWSTAAGSDYSLFL 619
Score = 132 (51.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 55/219 (25%), Positives = 98/219 (44%)
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFN 264
G+ +RG + + SV+ P+ GL ++ + + L+ G +Y++G+ +
Sbjct: 13 GAKERGLVYTWRAGSCSVT-PERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPWR 71
Query: 265 STSDVNCXXX-----XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERV 317
S + C G H +T G V M G + G +++ V
Sbjct: 72 SGPEEFCANSPILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYV 131
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+P+S++ + S L V+V+Q+A G EH+ ++ +R I W WG QLGL T +
Sbjct: 132 PEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSREI--WAWGSGCQLGLITTTFPV 189
Query: 378 -HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
P+ V + R L++ CG+ + A+ + CLP Q
Sbjct: 190 TKPQKV---EHLAGR-VVLQIACGAYHSLALVQ-CLPVQ 223
Score = 120 (47.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 48/180 (26%), Positives = 81/180 (45%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+++ G G GQLGHGD P+ V S K V Q++ G HSL L +QVY +G
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAK---SQVYSWG 579
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH----LYTWGR- 261
S GQLG + ++P++ D + +A D S L+ E LY G+
Sbjct: 580 SNIFGQLGHTNS---PTTVPRLAKVCGD-GVWSTAAGSDYSLFLADEEDFQPGLYYCGQE 635
Query: 262 -GFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ S+ NC +G+ ++ GD ++++ + G ++ ++ST
Sbjct: 636 TATDNLSENNCSKNPVLLLSCSK--IGYISNVIAGGDNCLVLVDKNIMGYIASLHELAST 693
Score = 111 (44.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 41/134 (30%), Positives = 60/134 (44%)
Query: 76 GAHVLALTSPS----SVI-GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR----- 125
G HV+ + + S +V GG V+ WG SSGQ P+P++ D
Sbjct: 90 GQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLS 149
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIA 184
+ ++ G H+ +S S ++ G G QLG + P KV + V QIA
Sbjct: 150 VRVLQLACGEEHTLALSLSREIWAWGSGC--QLGLITTTFPVTKPQKVEHLAGRVVLQIA 207
Query: 185 CGMRHSLVLLKDCL 198
CG HSL L++ CL
Sbjct: 208 CGAYHSLALVQ-CL 220
Score = 103 (41.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 29/89 (32%), Positives = 44/89 (49%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V +LDG +VIQ++AG HS +T +
Sbjct: 522 EVWSWGRGKDGQLGHGDVLPRLQPLCV-----KSLDGKEVIQLSAGGHHSLALTAKSQVY 576
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNL-GD 386
+WG GQLG N+ + P++ + GD
Sbjct: 577 SWGSNIFGQLGHTNSPTTV-PRLAKVCGD 604
Score = 95 (38.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ +SA G S AL+A+ +Y
Sbjct: 519 LRTEVWSWGRGKDGQLGHG-DVLPRLQ-PLCVKSLDGKEVIQLSAGGHHSLALTAKSQVY 576
Query: 258 TWG 260
+WG
Sbjct: 577 SWG 579
Score = 92 (37.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 29/141 (20%), Positives = 68/141 (48%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T+ + G NH +++ G +++ G + + G ++ ++S P+ ++ + ++V +A G
Sbjct: 42 TVLQAALGTNHGLLLTEGGEVYSFGKLPW-RSGPEEFCANS-PILENTLLGQHVITVAAG 99
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI----RSVSLPQV-TIGLHDIEIVGIS 241
H+ + + G VY +G+ GQ V+ + +S+ T L + ++ ++
Sbjct: 100 SFHNGAVTE---GGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLA 156
Query: 242 ANGDRSAALSAEGHLYTWGRG 262
+ + ALS ++ WG G
Sbjct: 157 CGEEHTLALSLSREIWAWGSG 177
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKV--SNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
GGS LS P +S P L KV + + V + +G + + + + +WG
Sbjct: 472 GGSRR--LSLPGLLSQVSPR--LLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWG 527
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
G+ GQLG G+ ++ P V
Sbjct: 528 RGKDGQLGHGDVLPRLQPLCV 548
Score = 56 (24.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP--KP--VTFFDGHRYTI 128
ACG H LAL+ + ++++WG G QLG ++ +P KP V G +
Sbjct: 156 ACGEEHTLALS-----LSREIWAWGSGC--QLG---LITTTFPVTKPQKVEHLAGR--VV 203
Query: 129 THISAGWNHS 138
I+ G HS
Sbjct: 204 LQIACGAYHS 213
Score = 44 (20.5 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 14/49 (28%), Positives = 18/49 (36%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG+G QLG ACG H LAL
Sbjct: 170 EIWAWGSGC--QLGLITTTFPVTKPQKVEHLAGRVVLQIACGAYHSLAL 216
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 124 (48.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 32/89 (35%), Positives = 43/89 (48%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWG--RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
A G + ALT SVI +WG R S+G + ++ + PV + I
Sbjct: 250 AAGASFTAALTDQGSVI-----AWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVK 304
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
I+AG NH + + GCL T GDG GQLG
Sbjct: 305 IAAGENHLVMLDEKGCLLTFGDGEMGQLG 333
Score = 96 (38.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 47/189 (24%), Positives = 75/189 (39%)
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
L +PS +IG +V S G G + LGH P+ V F+ AG HS +
Sbjct: 144 LFAPS-IIGDRVLSCGEGEA--LGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVL 200
Query: 142 SDSGCLFTCGDGTFGQL-GHGDYRSHSSP----VKVSSFVNKN--VHQIACGMRHSLVLL 194
+ G ++ CG G + G + S+ VK + K + +A G + L
Sbjct: 201 TSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALT 260
Query: 195 KDCLGNQV-YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
G+ + +G G + V + P V + +IV I+A + L +
Sbjct: 261 DQ--GSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEK 318
Query: 254 GHLYTWGRG 262
G L T+G G
Sbjct: 319 GCLLTFGDG 327
Score = 78 (32.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD-GVKVIQIAAGA 345
G HV++L DG+V +G + L + + ++ K++ ++A
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVSAKL 501
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLG 371
S +E+ WG+ GQLGLG
Sbjct: 502 ATSIAWSEDGTAYAWGFDTTGQLGLG 527
Score = 69 (29.3 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS----KDRIRSVSLPQVTIGLHDIEIVGIS 241
G++H ++L D +V+ G LG+ KD + + D +IVG+S
Sbjct: 442 GVQHVVILGSD---GKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVGVS 498
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDV 269
A S A S +G Y WG F++T +
Sbjct: 499 AKLATSIAWSEDGTAYAWG--FDTTGQL 524
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
G +H ++ + + G LGLGN
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGN 470
Score = 39 (18.8 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
M+S PE +SS ++LDG +I + +H+ ++ +
Sbjct: 535 MVSKPEEISS-----------AHLDGYSIIGASISDQHTLIIAK 567
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 98/419 (23%), Positives = 159/419 (37%)
Query: 13 KSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXX 72
+ AL + K K+ + V + G G GQLG G E
Sbjct: 14 EDALPKSKKVKVSHRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDIVQAE 73
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITH 130
A GG H + L+ G+V+S+G G LG V+ + P V + +
Sbjct: 74 A-GGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQE----KVIQ 123
Query: 131 ISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGM 187
+SAG +H+ +++ G +F G G +G + S PV+V V V ++A G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVP--VVKVASGN 181
Query: 188 RHSLVLLKD----CLGNQVYG-FG------SGKRGQLGVSKDRI-RSVSLPQVTIGLHDI 235
H ++L D LG+ G G + + G+ G+ + + + V L H +
Sbjct: 182 DHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGH-V 240
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV----NCXXXXXXXXXXXXXX 285
+ A+S+EGH+Y +G G T N
Sbjct: 241 RFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFS 300
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H + + +G+ LG + +G L E + + + ++ + V A GA
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE-KSVPTLIPRLPTVSSV-----ACGA 354
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
VT++ + WG G + QLG G D P V G + +NR L V G T
Sbjct: 355 SVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMTGKQLENR-VVLTVSSGGQHT 411
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 60/231 (25%), Positives = 99/231 (42%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ ++ + P + + + + +IV A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGEN-VMERKKPAL-VSIPE-DIVQAEAGGMHTVCLSKSGQVYSFGC 93
Query: 261 --RG-FNSTSDVNCXXXXXXXXXXXXXXL----GWNHVLVLTGDGEVLMLGG--SHHGML 311
G + V + G +H LT DG V + G ++G++
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI 153
Query: 312 S--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+P + S P+ V L V V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMKKSMV-PVQVQLS-------VPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
N + + PK V L + + FCG+ FT+AIS
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/178 (23%), Positives = 71/178 (39%)
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG A++S G V+ +G + QLG P+ +T F + S
Sbjct: 247 CGAYFTFAISSE-----GHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSG 301
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLV 192
G +H+ + G ++ G +G+LG G+ S P + V +ACG
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRL--PTVSSVACGASVGYA 359
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ KD +V+ +G G QLG +D + L + ++ +S+ G + L
Sbjct: 360 VTKD---GRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 98 (39.6 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 40/148 (27%), Positives = 64/148 (43%)
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQ-LGHGD----YRSHSSPVKVSSFV 176
H+ + I+AG H+ + SG +F G G + G+ L G + + P +V+
Sbjct: 15 HKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLE 74
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N + G HS L D +VY +GS K GQL + + +PQ I H +
Sbjct: 75 NSKAMCVLAGSDHS-ASLTDA--GEVYVWGSNKHGQLA---NEAAFLPVPQ-KIEAHCFQ 127
Query: 237 ---IVGISANGDRSAALSAEGHLYTWGR 261
+ I + A + G ++TWGR
Sbjct: 128 NEKVTAIWSGWTHLVAQTETGKMFTWGR 155
Score = 97 (39.2 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRG--SSGQ-LGHGEMVDALY----PKPVTFFDGHR 125
A G H +A T+ G VF WG G S G+ L G+ + + P VT + +
Sbjct: 23 AAGLRHAVAATA-----SGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSK 77
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIA 184
+ AG +HS ++D+G ++ G GQL + + ++ F N+ V I
Sbjct: 78 AMC--VLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIW 135
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G H L+ +++ +G GQLG
Sbjct: 136 SGWTH---LVAQTETGKMFTWGRADYGQLG 162
Score = 96 (38.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDP---------ERVSSTRPLSVALEKVSN----L 333
GW H++ T G++ G + +G L E+ S P S + + L
Sbjct: 137 GWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCL 196
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 393
G +++ G+EH+ + +WGW EHG G G + PK V + +
Sbjct: 197 TGAT--EVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANVWAPKPV----QALLSSS 249
Query: 394 QLEVFCGSGFTYAISRHCLPS 414
L V CG+G + A+ + LP+
Sbjct: 250 GLLVGCGAGHSLALCQ--LPA 268
Score = 80 (33.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 36/157 (22%), Positives = 61/157 (38%)
Query: 168 SPVKVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQLGVSKDRIRSV 223
SP ++K V IA G+RH++ + Q +G G G+R G + +
Sbjct: 6 SPESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQ-WGTGLASCGRRLCPGQTLPLFFTA 64
Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDV----NCXXX 274
P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 65 KEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAH 124
Query: 275 XXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGML 311
GW H++ T G++ G + +G L
Sbjct: 125 CFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 161
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 160 (61.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 54/147 (36%), Positives = 71/147 (48%)
Query: 117 PVTFFDGHRYT-ITHISAGWNHSGFVSDSGCLFT----CGDGTFGQLGHGDYRSHSSPVK 171
PV+ D HR + + + A + S + S LFT G G GQLGHGDY P+
Sbjct: 489 PVSPSDTHRTSNLRAVRASTSESRNLLPS--LFTEVWSWGKGHEGQLGHGDYLPRLQPLC 546
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-LPQVTI 230
+ S K V +I G HSL L C QVY +GS K GQLG R+ S S +P +T
Sbjct: 547 IKSLSKKEVVKITAGANHSLALTAQC---QVYSWGSEKFGQLG----RMNSPSTVPNLTT 599
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLY 257
I + ++A G L A+G Y
Sbjct: 600 VSDGIRVWDVAA-GQTHTLLLADGDCY 625
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G +L+ GG + P + P S+ LE S L G VI ++AG+ H + VTE+ +
Sbjct: 44 GLLLIEGGQVYSFGEQPWKPVEPPPASLVLE--STLSGQHVISVSAGSYHCSAVTEDGLV 101
Query: 358 MTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQL----EVFCGSGFTYAIS-RH 410
+ WG +GQ G+ T D++ P V + D+ + QL V CG+ T A+S +H
Sbjct: 102 LMWGENSYGQCGVSGT-DRVPSPTPVTVVDD-ETHPPQLVRVLNVACGAQHTLALSNKH 158
Score = 133 (51.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWG+G GQLGHG+ + L P + + + I+AG NHS ++ +++ G
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLS--KKEVVKITAGANHSLALTAQCQVYSWG 578
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-DCLGNQVYGFG 206
FGQLG + S + P + V +A G H+L+L DC +Y G
Sbjct: 579 SEKFGQLGRMNSPS-TVPNLTTVSDGIRVWDVAAGQTHTLLLADGDCYQPILYYSG 633
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 48/175 (27%), Positives = 71/175 (40%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLALTSPSSVIGGKVF 94
+VWSWG G +GQLG G G H LALT+ +V+
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQC-----QVY 575
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC----LFTC 150
SWG GQLG + P T DG R + ++AG H+ ++D C L+
Sbjct: 576 SWGSEKFGQLGRMNSPSTV-PNLTTVSDGIR--VWDVAAGQTHTLLLADGDCYQPILYYS 632
Query: 151 GD--GTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G+ G Q+ G + + F++ +H++A R L L NQ+
Sbjct: 633 GEQIGYVNQVFGGGLNCLALADQNAMGFIS-TIHELASAERKFYCSLSK-LKNQI 685
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 39/131 (29%), Positives = 65/131 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
G H +T DG VLM G + +G +S +RV S P++V ++ V+V+ +A G
Sbjct: 88 GSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACG 147
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGL-GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
A+H+ ++ + W WG QLGL N P+ V + R +++ CG+
Sbjct: 148 AQHTLALSNKHEV--WAWGSGCQLGLVTNVFPVWKPQKV---EHLVGRYV-VQIACGAFH 201
Query: 404 TYAISRHCLPS 414
+ A+ + LPS
Sbjct: 202 SLALVQF-LPS 211
Score = 109 (43.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 40/131 (30%), Positives = 60/131 (45%)
Query: 76 GAHVLALTSPS---SVI--GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--- 127
G HV+++++ S S + G V WG S GQ G P PVT D +
Sbjct: 79 GQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQL 138
Query: 128 --ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIA 184
+ +++ G H+ +S+ ++ G G QLG + P KV V + V QIA
Sbjct: 139 VRVLNVACGAQHTLALSNKHEVWAWGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIA 196
Query: 185 CGMRHSLVLLK 195
CG HSL L++
Sbjct: 197 CGAFHSLALVQ 207
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G H G L + + +PL + +L +V++I AGA HS +T +
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCI-----KSLSKKEVVKITAGANHSLALTAQCQVY 575
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+WG + GQLG N+ + P + + D
Sbjct: 576 SWGSEKFGQLGRMNSPSTV-PNLTTVSD 602
Score = 76 (31.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ H + G H + + G +++ G+ + + +S V S+ ++V ++ G
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGEQPWKPVEPPP----ASLVLESTLSGQHVISVSAGS 89
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSLPQVTIG--LHD---IEIVGIS 241
H + +D L V +G GQ GVS DR+ S + P + H + ++ ++
Sbjct: 90 YHCSAVTEDGL---VLMWGENSYGQCGVSGTDRVPSPT-PVTVVDDETHPPQLVRVLNVA 145
Query: 242 ANGDRSAALSAEGHLYTWGRG 262
+ ALS + ++ WG G
Sbjct: 146 CGAQHTLALSNKHEVWAWGSG 166
Score = 72 (30.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA-LEKVSNLDGVKVIQIAAGA 345
G NH L LT +V G G L R++S P +V L VS DG++V +AAG
Sbjct: 561 GANHSLALTAQCQVYSWGSEKFGQLG---RMNS--PSTVPNLTTVS--DGIRVWDVAAGQ 613
Query: 346 EHSAVVTE 353
H+ ++ +
Sbjct: 614 THTLLLAD 621
Score = 46 (21.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
+VW+WG+G QLG + ACG H LAL
Sbjct: 159 EVWAWGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLAL 205
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 163 (62.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++WG+G GQLGHG+++ L P V DG + ++ AG HS ++ +++ G
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE--VIYLEAGGYHSLALTAKSQVYSWG 583
Query: 152 DGTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHSLVLL 194
TFGQLGH D+ + + P KVSS V +A G +SL L+
Sbjct: 584 SNTFGQLGHYDFPT-TVPRLAKVSS--ENGVWSVAAGQDYSLFLV 625
Score = 134 (52.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 40/129 (31%), Positives = 67/129 (51%)
Query: 290 HVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T G M G + G +++ + V P+S++ + S+L V+++Q+A G EH
Sbjct: 102 HNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEH 161
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ ++ +R I W WG QLGL T + P+ V + R L+V CG+ + A
Sbjct: 162 TLALSISREI--WAWGTGCQLGLITTTFPVTKPQKV---EHLAGR-VVLQVACGAFHSLA 215
Query: 407 ISRHCLPSQ 415
+ + CLPSQ
Sbjct: 216 LVQ-CLPSQ 223
Score = 103 (41.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ--LGHGDYRSHSSPVKVS-----SFVN 177
++ +T +++G H+G V++SG + G+ + GQ + + Y +PV +S S +
Sbjct: 91 QFVVT-VASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLA 149
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ Q+ACG H+L L + +++ +G+G QLG+ V+ PQ L +
Sbjct: 150 VRILQLACGEEHTLAL---SISREIWAWGTGC--QLGLITTTF-PVTKPQKVEHLAGRVV 203
Query: 238 VGISANGDRSAAL 250
+ ++ S AL
Sbjct: 204 LQVACGAFHSLAL 216
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 40/135 (29%), Positives = 57/135 (42%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT----- 127
A G H A+T G + WG S+GQ P PV+ D +
Sbjct: 97 ASGSFHNGAVTE-----SGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVR 151
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
I ++ G H+ +S S ++ G G QLG + P KV + V Q+ACG
Sbjct: 152 ILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACG 209
Query: 187 MRHSLVLLKDCLGNQ 201
HSL L++ CL +Q
Sbjct: 210 AFHSLALVQ-CLPSQ 223
Score = 88 (36.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G G L + + +PL V LDG +VI + AG HS +T +
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKC-----LDGKEVIYLEAGGYHSLALTAKSQVY 580
Query: 359 TWGWGEHGQLG 369
+WG GQLG
Sbjct: 581 SWGSNTFGQLG 591
Score = 86 (35.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L +V+ +G GK GQLG D + + P L E++ + A G S AL+A+ +Y
Sbjct: 523 LRTEVWTWGKGKEGQLGHG-DVLPRLQ-PLCVKCLDGKEVIYLEAGGYHSLALTAKSQVY 580
Query: 258 TWG 260
+WG
Sbjct: 581 SWG 583
Score = 71 (30.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA-GAEHSAVVTENRA-IMTWG 361
GGS LS P +S P L K + + V+ E A++ R + TWG
Sbjct: 476 GGSRR--LSLPGLLSQVSPR--LLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWG 531
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGD 386
G+ GQLG G+ ++ P V D
Sbjct: 532 KGKEGQLGHGDVLPRLQPLCVKCLD 556
Score = 43 (20.2 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 14/49 (28%), Positives = 17/49 (34%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDEXXXXXXXXXXXXXXXXXACGGAHVLAL 82
++W+WG G QLG ACG H LAL
Sbjct: 170 EIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 150 (57.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 70/275 (25%), Positives = 110/275 (40%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG----DY--RSHSSPVKVSSF-VNKNV 180
I IS+G HS ++ G +F GD FGQ G DY S SP+ SF ++ +
Sbjct: 124 ILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPI 182
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
I C M S V+ D G V+ FG + GQ G I+ +V + +I +
Sbjct: 183 ISIHCSMDTSFVV--DSSG-AVFSFGLNEDGQCGNEAYGIQWEPA-KVRGDVEGSKIQKV 238
Query: 241 SANGDRSAALSAEGHLYTWGR-----GFNSTSDVNCXXXXXXXXXXXXXXL---GWNHVL 292
S + D A S G ++ WG+ +T ++ + V+
Sbjct: 239 SGSTDTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGPIICVDSTQSSVV 298
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G V + G GM + E + + + L DG V ++AG + +
Sbjct: 299 ARNSRGNVFVWGVGVLGMGPEAESLKTPTQMDQPL-----FDGKMVTSVSAGNSCMSAIN 353
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL-GD 386
E+ + WG + LGLG+ Q+ P + L GD
Sbjct: 354 EDGRLFIWGENRYSSLGLGHQKRQLFPYQLFLPGD 388
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 100/420 (23%), Positives = 161/420 (38%)
Query: 13 KSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXX 72
+ A+ + K K+ + V + G G GQLG G E
Sbjct: 14 EDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAE 73
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITH 130
A GG H + L+ G+V+S+G G LG V+ + P V + +
Sbjct: 74 A-GGMHTVCLSQ-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQ 123
Query: 131 ISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGM 187
+SAG +H+ +++ G +F G G +G + S PV+V ++ V ++A G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDTQVVKVASGN 181
Query: 188 RHSLVLLKD----CLGNQVYG-FG------SGKRGQLGVSKDRI-RSVSLP-QVTIGLHD 234
H ++L D LG G G + + G+ G+ + + R V L + T G
Sbjct: 182 DHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGR-- 239
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV----NCXXXXXXXXXXXXX 284
+ + A+S EGH+Y +G G T N
Sbjct: 240 VRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGF 299
Query: 285 XLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
G +H + + +G+ LG + +G L E S+ +S L V +A G
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEK---SIPT-LISRLPVVS--SVACG 353
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
A V+++ + WG G + QLG G D P V G + +NR+ L V G T
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSP-VEMTGKQLENREV-LTVSSGGQHT 411
Score = 134 (52.2 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 78/346 (22%), Positives = 130/346 (37%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V + AG H+ +S SG +++
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD----VVQAEAGGMHTVCLSQSGQVYS 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L +D +V+ +GS +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTED---GRVFLWGSFR 147
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------- 260
G +G+ + +S+ QV + D ++V +++ D L+ +G LYT G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL---DTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQL 204
Query: 261 -------------RGFNSTSDVNCXXXXXXXXXXXX----XXLGWNHVLVLTGDGEVLML 303
+G C G ++ +G V
Sbjct: 205 GRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGF 264
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S++ L P S P ++ K S V + G H+ + + G
Sbjct: 265 GLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVG---FSGGQHHTVCMDSEGKAYSLGRA 321
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
E+G+LGLG ++ + L V CG+ YA+S+
Sbjct: 322 EYGRLGLGEGAEE--KSIPTL---ISRLPVVSSVACGASVGYAVSK 362
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 38/161 (23%), Positives = 67/161 (41%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+ +G + QLG P+ +T F + S G +H+ + G ++
Sbjct: 259 GHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G +G+LG G+ S P +S V +ACG + KD +V+ +G G
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKD---GRVFAWGMGT 373
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
QLG ++ + L + E++ +S+ G + L
Sbjct: 374 NYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLL 414
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 139 (54.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 54/184 (29%), Positives = 75/184 (40%)
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
QV GS GQLGV R V +PQ I LH ++V I+A + A +A G ++ WG
Sbjct: 7 QVLSCGSNSFGQLGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWG 64
Query: 261 RGFNSTSDVNC---------------XXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
G S C G +H LT GEV + G
Sbjct: 65 TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 124
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ HG L++ ++ P+ +E KV I +G H TE + TWG ++
Sbjct: 125 NKHGQLANE---AAFLPVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 180
Query: 366 GQLG 369
GQLG
Sbjct: 181 GQLG 184
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/183 (28%), Positives = 80/183 (43%)
Query: 91 GKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G+V S G S GQLG HG + P+ + H+ + I+AG H+ + SG +F
Sbjct: 6 GQVLSCGSNSFGQLGVPHGPR-RCVVPQAIEL---HKEKVVCIAAGLRHAVAATASGIVF 61
Query: 149 TCGDG--TFGQ-LGHGD----YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
G G + G+ L G + + P +V+ N + G HS L D +
Sbjct: 62 QWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHS-ASLTDA--GE 118
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE---IVGISANGDRSAALSAEGHLYT 258
VY +GS K GQL + + +PQ I H + + I + A + G ++T
Sbjct: 119 VYVWGSNKHGQLA---NEAAFLPVPQ-KIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFT 174
Query: 259 WGR 261
WGR
Sbjct: 175 WGR 177
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 46/185 (24%), Positives = 77/185 (41%)
Query: 141 VSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++++G + +CG +FGQLG HG R P + K V IA G+RH++ +
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI 59
Query: 199 GNQVYGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
Q +G G G+R G + + P GL + + + + A D SA+L+ G
Sbjct: 60 VFQ-WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 256 LYTWGRG-----FNSTSDV----NCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
+Y WG N + + GW H++ T G++ G +
Sbjct: 119 VYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRA 178
Query: 307 HHGML 311
+G L
Sbjct: 179 DYGQL 183
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 96/418 (22%), Positives = 156/418 (37%)
Query: 13 KSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXX 72
+ A+ + K K+ + V + G G GQLG G E
Sbjct: 14 EDAIPKSKKVKVSHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAE 73
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITH 130
A GG H + L G+V+S+G G LG V+ + P V + +
Sbjct: 74 A-GGMHTVCLNQ-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQ 123
Query: 131 ISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGM 187
+SAG +H+ +++ G +F G G +G + S PV+V ++ V ++A G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDMPVVKVASGN 181
Query: 188 RHSLVLLKD----CLGNQVYG-FG------SGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
H ++L D LG G G + + G+ G+ + + L + +
Sbjct: 182 DHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVR 241
Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV----NCXXXXXXXXXXXXXXL 286
+ A+S EGH+Y +G G T+ N
Sbjct: 242 FQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSG 301
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H + + +G+ LG + +G L E S+ +S L V +A GA
Sbjct: 302 GQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEK---SIPT-LISRLPVVS--SVACGAS 355
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
V+++ + WG G + QLG G D P V G + +NR L V G T
Sbjct: 356 VGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMTGKQLENR-VVLTVSSGGQHT 411
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 77/346 (22%), Positives = 130/346 (37%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V + AG H+ ++ SG +++
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD----VVQAEAGGMHTVCLNQSGQVYS 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L +D +V+ +GS +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTED---GRVFLWGSFR 147
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------- 260
G +G+ + +S+ QV + D+ +V +++ D L+ +G LYT G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL---DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQL 204
Query: 261 -------------RGFNSTSDVNCXXXXXXXXXXXX----XXLGWNHVLVLTGDGEVLML 303
+G C G ++ +G V
Sbjct: 205 GRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGF 264
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S++ L P S P ++ K S V + G H+ + + G
Sbjct: 265 GLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVG---FSGGQHHTICMDSEGKAYSLGRA 321
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
E+G+LGLG ++ + L V CG+ YA+S+
Sbjct: 322 EYGRLGLGEGAEE--KSIPTL---ISRLPVVSSVACGASVGYAVSK 362
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 38/161 (23%), Positives = 66/161 (40%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+ +G + QLG P+ +T F + S G +H+ + G ++
Sbjct: 259 GHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSL 318
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G +G+LG G+ S P +S V +ACG + KD +V+ +G G
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKD---GRVFAWGMGT 373
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
QLG +D + L + ++ +S+ G + L
Sbjct: 374 NYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 161 (61.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 98 RGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ +SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 888 KDASGERGEKDASKVTTYPPGSVRFDCEVRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 946
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VL+ D QV+ FGS +GQLG
Sbjct: 947 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLVMD---GQVFTFGSFSKGQLG 1000
Score = 105 (42.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL--GDEFQ---- 389
V+ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V G Q
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 975
Query: 390 NRDTQLEVFCGSGFTY 405
+ T + V G FT+
Sbjct: 976 SNHTAVLVMDGQVFTF 991
Score = 92 (37.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G++H +VL +G+V G HG L + S P V L G Q+ AG+
Sbjct: 924 GFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-----LPGPST-QVTAGSN 977
Query: 347 HSAVVTENRAIMTWGWGEHGQLG 369
H+AV+ + + T+G GQLG
Sbjct: 978 HTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ V+ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 569 HALLVAED--GS-VFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGS 625
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 626 SSVISKDGELYMFGKDA-IYSDSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 684
Query: 307 HHG 309
+ G
Sbjct: 685 NKG 687
Score = 83 (34.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 38/140 (27%), Positives = 54/140 (38%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAG 134
G+H L + SV S +G G+ Y PK + +G T + G
Sbjct: 567 GSHALLVAEDGSVFF--TGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNG 624
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
S +S G L+ G Y SS VS V Q+A G H+ VL+
Sbjct: 625 --SSSVISKDGELYMFGKDAI-------YSDSSS--LVSDLKGHFVTQVAMGKAHTCVLM 673
Query: 195 KDCLGNQVYGFGSGKRGQLG 214
K+ +V+ FG +GQ G
Sbjct: 674 KN---GEVWTFGVNNKGQCG 690
Score = 41 (19.5 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 677 EVWTFGVNNKGQCGRDTGAMN 697
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 143 (55.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 100/420 (23%), Positives = 160/420 (38%)
Query: 13 KSALINNAKPKIXXXXXXQQVVKVWSWGAGTDGQLGTGRLHDEXXXXXXXXXXXXXXXXX 72
+ A+ + K K+ + V + G G GQLG G E
Sbjct: 14 EDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAE 73
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITH 130
A GG H + L+ G+V+S+G G LG V+ + P V + +
Sbjct: 74 A-GGMHTVCLSQ-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQE----KVVQ 123
Query: 131 ISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGM 187
+SAG +H+ +++ G +F G G +G + S PV+V ++ V ++A G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDAPVVKVASGN 181
Query: 188 RHSLVLLKD----CLGNQVYG-FG------SGKRGQLGVSKDRI-RSVSLP-QVTIGLHD 234
H ++L D LG G G + + G+ G+ + + R V L + T G
Sbjct: 182 DHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGR-- 239
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV----NCXXXXXXXXXXXXX 284
+ + A+S EGH+Y +G G T N
Sbjct: 240 VRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGF 299
Query: 285 XLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
G +H + + +G+ LG + +G L E S+ +S L V +A G
Sbjct: 300 SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEK---SIPT-LISRLPVVS--SVACG 353
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
A V+++ + WG G + QLG G D P V G + +NR L V G T
Sbjct: 354 ASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMTGKQLENR-VVLTVSSGGQHT 411
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 78/346 (22%), Positives = 129/346 (37%)
Query: 91 GKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V + G+G GQLG GE V + P V + AG H+ +S SG +++
Sbjct: 35 GLVLTLGQGDVGQLGLGESVLERKKPALVPLLQD----VVQAEAGGMHTVCLSQSGQVYS 90
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G LG S V + + V Q++ G H+ L +D +V+ +GS +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTED---GRVFLWGSFR 147
Query: 210 --RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------- 260
G +G+ + +S+ QV + D +V +++ D L+ +G LYT G
Sbjct: 148 DNNGVIGLLEPMKKSMVPVQVQL---DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQL 204
Query: 261 -------------RGFNSTSDVNCXXXXXXXXXXXX----XXLGWNHVLVLTGDGEVLML 303
+G C G ++ +G V
Sbjct: 205 GRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGF 264
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S++ L P S P ++ K S V + G H+ + + G
Sbjct: 265 GLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVG---FSGGQHHTVCMDSEGKAYSLGRA 321
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
E+G+LGLG ++ + L V CG+ YA+S+
Sbjct: 322 EYGRLGLGEGAEE--KSIPTL---ISRLPVVSSVACGASVGYAVSK 362
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 38/161 (23%), Positives = 66/161 (40%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+ +G + QLG P+ +T F + S G +H+ + G ++
Sbjct: 259 GHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSL 318
Query: 151 GDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G +G+LG G+ S P +S V +ACG + KD +V+ +G G
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAVSKD---GRVFAWGMGT 373
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
QLG +D + L + ++ +S+ G + L
Sbjct: 374 NYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 149 (57.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 54/196 (27%), Positives = 90/196 (45%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--IT-------------HISAGWN 136
+++ +G S+ QLG G+ D P + + D ++ +T I+ N
Sbjct: 181 EIYVFGCNSNNQLGVGDSTDRATPA-LLYHDNFKFATDLTGSISERFKRPRYKRITISKN 239
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
HS V+ G LF+CG G+ G+LGHG D ++ ++ F +K + +A HS+ L
Sbjct: 240 HSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIALT 299
Query: 195 KDCLGNQVYGFGSGKRGQLGV-------SKDRIRSVSLPQVTIG--LHDIE-IVGISANG 244
D N+VY +G QLGV S + + + +G L ++ I+GI +
Sbjct: 300 TD---NEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIEVSK 356
Query: 245 DRSAALSAEGHLYTWG 260
S A S + +L WG
Sbjct: 357 IHSLAWS-KNYLCFWG 371
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 149 (57.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 54/196 (27%), Positives = 90/196 (45%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--IT-------------HISAGWN 136
+++ +G S+ QLG G+ D P + + D ++ +T I+ N
Sbjct: 181 EIYVFGCNSNNQLGVGDSTDRATPA-LLYHDNFKFATDLTGSISERFKRPRYKRITISKN 239
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
HS V+ G LF+CG G+ G+LGHG D ++ ++ F +K + +A HS+ L
Sbjct: 240 HSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSNHSIALT 299
Query: 195 KDCLGNQVYGFGSGKRGQLGV-------SKDRIRSVSLPQVTIG--LHDIE-IVGISANG 244
D N+VY +G QLGV S + + + +G L ++ I+GI +
Sbjct: 300 TD---NEVYAWGLNSFNQLGVPNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIEVSK 356
Query: 245 DRSAALSAEGHLYTWG 260
S A S + +L WG
Sbjct: 357 IHSLAWS-KNYLCFWG 371
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 164 (62.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 41/118 (34%), Positives = 59/118 (50%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 874 KDGSGERGEKDASKITTYPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 932
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VLL D QV+ FGS +GQLG
Sbjct: 933 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMD---GQVFTFGSFSKGQLG 986
Score = 101 (40.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 948
Score = 89 (36.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ ++ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 555 HALLVAED--GS-IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 611
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 612 SSVISKDGELYMFGKDA-IYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 670
Query: 307 HHG 309
+ G
Sbjct: 671 NKG 673
Score = 41 (19.5 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 663 EVWTFGVNNKGQCGRDTGAMN 683
>SGD|S000000018 [details] [associations]
symbol:ATS1 "Protein required for modification of wobble
nucleosides in tRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0007017 "microtubule-based process" evidence=IGI;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IDA;IPI] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IGI;IMP] [GO:0007117 "budding cell bud
growth" evidence=IGI;IMP] SGD:S000000018 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0000226 EMBL:L05146 EMBL:BK006935
GO:GO:0007117 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
PIR:S36714 RefSeq:NP_009382.2 ProteinModelPortal:P31386 SMR:P31386
IntAct:P31386 MINT:MINT-2786397 STRING:P31386 PeptideAtlas:P31386
EnsemblFungi:YAL020C GeneID:851213 KEGG:sce:YAL020C CYGD:YAL020c
eggNOG:COG5184 HOGENOM:HOG000163478 KO:K15462 OMA:GAGCATS
OrthoDB:EOG4H75MP NextBio:968094 Genevestigator:P31386
GermOnline:YAL020C GO:GO:0002098 Uniprot:P31386
Length = 333
Score = 100 (40.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
C++ G QLG G +P + V V +IACG HS++L D GN V G
Sbjct: 3 CVYAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGAIVRKIACGGNHSVMLTND--GNLV-G 59
Query: 205 FGSGKRGQLGVSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G +RG+L S +R V V + +V ++ D + + A+G + W RG
Sbjct: 60 CGDNRRGELD-SAQALRQVHDWRPVEV---PAPVVDVACGWDTTVIVDADGRV--WQRG 112
Score = 86 (35.3 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G QLG G D P + V DG + I+ G NHS +++ G L CG
Sbjct: 4 VYAFGSNGQRQLGLGHDEDMDTPQRSVPGDDGA--IVRKIACGGNHSVMLTNDGNLVGCG 61
Query: 152 DGTFGQLGHGDY--RSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
D G+L + H PV+V + V +ACG ++++ D +V+ G G
Sbjct: 62 DNRRGELDSAQALRQVHDWRPVEVPA----PVVDVACGWDTTVIVDAD---GRVWQRGGG 114
Score = 80 (33.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGHLYTWG 260
VY FGS + QLG+ D + PQ ++ D IV I+ G+ S L+ +G+L G
Sbjct: 4 VYAFGSNGQRQLGLGHDE--DMDTPQRSVPGDDGAIVRKIACGGNHSVMLTNDGNLVGCG 61
Query: 261 ---RG-FNSTS---DVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGG 305
RG +S V+ GW+ +++ DG V GG
Sbjct: 62 DNRRGELDSAQALRQVHDWRPVEVPAPVVDVACGWDTTVIVDADGRVWQRGG 113
Score = 79 (32.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 338 VIQIAAGAEHSAVVTENRA-------IMTWGWGEHGQLG 369
++ +A G+EH + T N+ + WGWGEHG G
Sbjct: 263 IVGVATGSEHGILTTANQEGKSHCYNVYCWGWGEHGNCG 301
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 116 (45.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 141 VSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++++G + +CG +FGQLG HG R P + K V IA G+RH++ +
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI 59
Query: 199 GNQVYGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
Q +G G G+R G + + P GL + + + + A D SA+L+ G
Sbjct: 60 VFQ-WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 256 LYTWG 260
+Y WG
Sbjct: 119 VYVWG 123
Score = 105 (42.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/132 (31%), Positives = 60/132 (45%)
Query: 91 GKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G+V S G S GQLG HG + P+ + H+ + I+AG H+ + SG +F
Sbjct: 6 GQVLSCGSNSFGQLGVPHGPR-RCVVPQAIEL---HKEKVVCIAAGLRHAVAATASGIVF 61
Query: 149 TCGDG--TFGQ-LGHGD----YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
G G + G+ L G + + P +V+ N + G HS L D +
Sbjct: 62 QWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHS-ASLTDA--GE 118
Query: 202 VYGFGSGKRGQL 213
VY +GS K GQL
Sbjct: 119 VYVWGSNKHGQL 130
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SSTRPLS-VALE--KVSNLDGVKVIQI 341
G H + T G V G G+ S R+ T PL A E +V+ L+ K + +
Sbjct: 47 GLRHAVAATASGIVFQWGT---GLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQL 368
AG++HSA +T+ + WG +HGQL
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHGQL 130
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 169 (64.5 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 46/138 (33%), Positives = 68/138 (49%)
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
YP FD + +S G++HS + ++G ++T G G GQLGHGD S SP V
Sbjct: 914 YPPGAVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQ 972
Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG---VSKDRIRSVSLPQVTI 230
+ + Q+ G H+ VLL D QV+ FGS +GQLG + + P I
Sbjct: 973 ALPGPST-QVTAGSNHTAVLLMD---GQVFTFGSFSKGQLGRPILDMPYWNAKPSPMPNI 1028
Query: 231 GL-HDIEIVGISANGDRS 247
G + + I A+GD++
Sbjct: 1029 GAKYGRKATWIGASGDQT 1046
Score = 104 (41.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
E L G S G D ++++ P +V + ++ +Q++ G HS V+ EN +
Sbjct: 894 EKLKDGSSERGD-KDASKITTYPPGAVRFDCE-----LRAVQVSCGFHHSVVLMENGDVY 947
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVV 382
T+G+G+HGQLG G+ + P +V
Sbjct: 948 TFGYGQHGQLGHGDVNSRGSPTLV 971
Score = 93 (37.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 34/123 (27%), Positives = 53/123 (43%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D V+ GS +G+ G S K R + P+ I L V + N
Sbjct: 584 HALLVAED---GSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGS 640
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ ++ +G LY +G+ SD C +G H VLT GEV G +
Sbjct: 641 SSIVTKDGELYMFGKDA-IYSDSTCQVSDLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVN 699
Query: 307 HHG 309
+ G
Sbjct: 700 NKG 702
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 17/64 (26%), Positives = 24/64 (37%)
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
D VL LG G +V T P + NL G+ + + G + AV +
Sbjct: 2556 DANVLDLGAGQSGG-PGLYKVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVINS 2614
Query: 357 IMTW 360
TW
Sbjct: 2615 EGTW 2618
Score = 40 (19.1 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 35 KVWSWGAGTDGQLG--TGRL 52
+VW++G GQ G TG +
Sbjct: 692 EVWTFGVNNKGQCGRDTGAM 711
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 385 GDEFQNRDTQLEVFCGSGFTYA-ISRH 410
GDE +N+ + + C G + +S H
Sbjct: 3745 GDEDKNKTKSITISCVKGINASYVSVH 3771
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 167 (63.8 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 47/155 (30%), Positives = 73/155 (47%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 812 KDGSGERGEKDASKITTYPPGAVRFDCELRAV-QVSCGFHHSVILMENGDVYTFGYGQHG 870
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-- 214
QLGHGD S P V + + Q+ G H+ +LL D QV+ FGS +GQLG
Sbjct: 871 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAILLMD---GQVFTFGSFSKGQLGRP 926
Query: 215 -VSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRS 247
+ + P IG + + I A+GD++
Sbjct: 927 ILDMPYWNAKPAPMPNIGSKYGRKATWIGASGDQT 961
Score = 100 (40.3 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS ++ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 840 LRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 886
Score = 89 (36.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 48/206 (23%), Positives = 87/206 (42%)
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRS----HSSP--- 169
++ FD + + IS G++ V +G F G++ + G Y+S P
Sbjct: 411 ISLFDLEK-DLHIISTGFDEESAVLGAGREFALMKTASGKIYYTGKYQSLGIKQGGPSAG 469
Query: 170 --VKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVS 224
V++ + + Q + G H+L++ D G+ ++ GS +G+ G S K R +S
Sbjct: 470 KWVELPITKSPKIIQFSVGHDGSHALLVADD--GS-IFFTGSASKGEDGESTKSRRQSKP 526
Query: 225 L-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXX 283
P+ I + ++ + N S+ +S +G LY +G+ SD
Sbjct: 527 YKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGKDA-IYSDSTSLVTDLKGHFVTQ 585
Query: 284 XXLGWNHVLVLTGDGEVLMLGGSHHG 309
+G H VL +GEV G ++ G
Sbjct: 586 VAMGKAHTCVLMKNGEVWTFGVNNKG 611
Score = 40 (19.1 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 35 KVWSWGAGTDGQLG--TGRL 52
+VW++G GQ G TG +
Sbjct: 601 EVWTFGVNNKGQCGRDTGSM 620
Score = 38 (18.4 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+V T P + NL G+ + + G + AV + TW
Sbjct: 2494 KVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVTNSEGTW 2538
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 164 (62.8 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 41/118 (34%), Positives = 59/118 (50%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 912 KDGSGERGEKDASKITTYPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 970
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VLL D QV+ FGS +GQLG
Sbjct: 971 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMD---GQVFTFGSFSKGQLG 1024
Score = 101 (40.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 986
Score = 89 (36.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ ++ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 593 HALLVAED--GS-IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 649
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 650 SSVISKDGELYMFGKDA-IYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 708
Query: 307 HHG 309
+ G
Sbjct: 709 NKG 711
Score = 41 (19.5 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 701 EVWTFGVNNKGQCGRDTGAMN 721
Score = 39 (18.8 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 203 YGFGSGKRGQLGVSKDRIRS-VSLPQVTI 230
YG G+ K QL + I+S +LP +I
Sbjct: 2707 YGLGNNKGDQLSAILNSIQSRPNLPAPSI 2735
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 164 (62.8 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 41/118 (34%), Positives = 59/118 (50%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 787 KDGSGERGEKDASKITTYPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 845
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VLL D QV+ FGS +GQLG
Sbjct: 846 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMD---GQVFTFGSFSKGQLG 899
Score = 101 (40.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 815 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 861
Score = 89 (36.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ ++ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 468 HALLVAED--GS-IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 524
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 525 SSVISKDGELYMFGKDA-IYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 583
Query: 307 HHG 309
+ G
Sbjct: 584 NKG 586
Score = 41 (19.5 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 576 EVWTFGVNNKGQCGRDTGAMN 596
Score = 38 (18.4 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+V T P + NL G+ + + G + AV + TW
Sbjct: 2467 KVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVTNSEGTW 2511
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 164 (62.8 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 41/118 (34%), Positives = 59/118 (50%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 874 KDGSGERGEKDASKITTYPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 932
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VLL D QV+ FGS +GQLG
Sbjct: 933 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMD---GQVFTFGSFSKGQLG 986
Score = 101 (40.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 948
Score = 89 (36.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ ++ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 555 HALLVAED--GS-IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 611
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 612 SSVISKDGELYMFGKDA-IYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 670
Query: 307 HHG 309
+ G
Sbjct: 671 NKG 673
Score = 41 (19.5 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 663 EVWTFGVNNKGQCGRDTGAMN 683
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+V T P + NL G+ + + G + AV + TW
Sbjct: 2554 KVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVTNSEGTW 2598
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 164 (62.8 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 41/118 (34%), Positives = 59/118 (50%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 912 KDGSGERGEKDASKITTYPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 970
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VLL D QV+ FGS +GQLG
Sbjct: 971 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLLMD---GQVFTFGSFSKGQLG 1024
Score = 101 (40.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 986
Score = 89 (36.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ ++ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 593 HALLVAED--GS-IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 649
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 650 SSVISKDGELYMFGKDA-IYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 708
Query: 307 HHG 309
+ G
Sbjct: 709 NKG 711
Score = 41 (19.5 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 701 EVWTFGVNNKGQCGRDTGAMN 721
Score = 38 (18.4 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+V T P + NL G+ + + G + AV + TW
Sbjct: 2592 KVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVTNSEGTW 2636
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 161 (61.7 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 98 RGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ +SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 874 KDASGERGEKDASKVTTYPPGSVRFDCEVRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 932
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ VL+ D QV+ FGS +GQLG
Sbjct: 933 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAVLVMD---GQVFTFGSFSKGQLG 986
Score = 105 (42.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL--GDEFQ---- 389
V+ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V G Q
Sbjct: 902 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAG 961
Query: 390 NRDTQLEVFCGSGFTY 405
+ T + V G FT+
Sbjct: 962 SNHTAVLVMDGQVFTF 977
Score = 90 (36.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ V+ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 555 HALLVAED--GS-VFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGS 611
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 612 SSVISKDGELYMFGKDA-IYSDSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 670
Query: 307 HHG 309
+ G
Sbjct: 671 NKG 673
Score = 41 (19.5 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 663 EVWTFGVNNKGQCGRDTGAMN 683
Score = 40 (19.1 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+V T P + NL G+ + + G + AV A TW
Sbjct: 2577 KVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVTSAEGTW 2621
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 203 YGFGSGKRGQLGVSKDRIRS-VSLPQVTI 230
YG G+ K QL + I+S +LP +I
Sbjct: 2692 YGLGNNKGDQLSAILNSIQSRPNLPAPSI 2720
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 161 (61.7 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 41/118 (34%), Positives = 58/118 (49%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G G G+ ++ YP FD + +S G++HS + ++G ++T G G G
Sbjct: 876 GSGDRGEKDASKITT--YPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 932
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + AC H+ VLL D QV+ FGS +GQLG
Sbjct: 933 QLGHGDVNSRGCPTLVQALPGPSTQVTACS-NHTAVLLMD---GQVFTFGSFSKGQLG 986
Score = 101 (40.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLV 948
Score = 90 (36.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ V+ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 555 HALLVAED--GS-VFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 611
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 612 SSVISKDGELYMFGKDA-IYSDSSSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 670
Query: 307 HHG 309
+ G
Sbjct: 671 NKG 673
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 663 EVWTFGVNNKGQCGRDTGAMN 683
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 203 YGFGSGKRGQLGVSKDRIRS-VSLPQVTI 230
YG G+ K QL + I+S +LP +I
Sbjct: 2689 YGLGNNKGDQLSAILNSIQSRPNLPAPSI 2717
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H +VLT GEV G + +G L + + P+ V + G + Q+AAG+
Sbjct: 974 GLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRV------QVPGA-ISQVAAGSN 1026
Query: 347 HSAVVTENRAIMTWGWGEHGQLG 369
H+ ++T + T+G + GQLG
Sbjct: 1027 HTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 98 (39.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 91 GKVFSWG---RGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G VF G RG G A+ PK +T DGH + H + S FV+ +G
Sbjct: 670 GTVFFAGTARRGEDGDSSKNRRQPKAVKPKKMTKIDGH--VVVHAACNNGTSAFVTKTGK 727
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
L G T H D VS + ++V ++A G H + L + G Q++ FG
Sbjct: 728 LIMYGKDT----AHCDAMGF-----VSELLEQHVTKVALGKAHCVAL--NAKG-QLFSFG 775
Query: 207 SGKRGQLGVSKDRIRSV 223
+GQ G ++++ V
Sbjct: 776 LNNKGQCGRIFNKLQPV 792
Score = 85 (35.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
DP RV+ P + L S V+Q+A G H+ V+T + T+G ++GQLG G+
Sbjct: 948 DPPRVAPLAPQLLQLTSSS-----PVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGD 1002
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/199 (26%), Positives = 88/199 (44%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G H LALT G+++ WG QL + + ++ KP+ + IS G
Sbjct: 42 GYNHSLALTET-----GELYGWGDNRHHQLSSNKAITSI-DKPIKIQVIPNQRVKSISCG 95
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
N S + ++G L+ +G L G + SP KV K V ++ G+ H V+
Sbjct: 96 GNFSAAIMENGLLYV-----WGTLIEGG-KCTESPTKVDLL--KGVTCVSIGINHCAVVA 147
Query: 195 KDCLGNQ---VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ VY +G+ ++GQLGV D I + +VT+G I + G+ A
Sbjct: 148 DSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPR-RVTLGSKAISV----CCGEEFTAAI 202
Query: 252 AEGH-LYTWGRGFNSTSDV 269
EG+ ++ WG +N + +
Sbjct: 203 VEGNEVFVWG--YNKSRQI 219
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/229 (24%), Positives = 84/229 (36%)
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G HSL L + ++YG+G + QL +K I S+ P + + + IS G+
Sbjct: 42 GYNHSLALTET---GELYGWGDNRHHQLSSNK-AITSIDKPIKIQVIPNQRVKSISCGGN 97
Query: 246 RSAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDG------E 299
SAA+ G LY WG +G NH V+
Sbjct: 98 FSAAIMENGLLYVWGTLIEGGKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRS 157
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G + G L + P V L G K I + G E +A + E +
Sbjct: 158 VYTWGTNRKGQLGVVGDSITNAPRRVTL-------GSKAISVCCGEEFTAAIVEGNEVFV 210
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
WG+ + Q+ N D+I V F RD +E+ C + A S
Sbjct: 211 WGYNKSRQI-CSNNSDEIISIPVK---PFLGRDI-VELSCTKNYIAARS 254
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 63/246 (25%), Positives = 102/246 (41%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ IS G N S + ++G L+ +G L G + SP KV K V ++ G+
Sbjct: 89 VKSISCGGNFSAAIMENGLLYV-----WGTLIEGG-KCTESPTKVDLL--KGVTCVSIGI 140
Query: 188 RHSLVLLKDCLGNQ---VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H V+ + VY +G+ ++GQLGV D I + +VT+G I + G
Sbjct: 141 NHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPR-RVTLGSKAISV----CCG 195
Query: 245 DRSAALSAEGH-LYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHV-LVLTGDGEVLM 302
+ A EG+ ++ WG +N + + LG + V L T +
Sbjct: 196 EEFTAAIVEGNEVFVWG--YNKSRQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAAR 253
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + + E+V + +K N K+ QI+A H V++E I +WG
Sbjct: 254 SGVGNVCVWGSNEQVCR-----IGDDKFINFPN-KIKQISASTSHILVLSEKGEIFSWGN 307
Query: 363 GEHGQL 368
E QL
Sbjct: 308 SEDNQL 313
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 59/238 (24%), Positives = 101/238 (42%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC---- 146
G ++ WG G G+ ++ P V G +T +S G NH V+DS
Sbjct: 106 GLLYVWGTLIEG----GKCTES--PTKVDLLKG----VTCVSIGINHCAVVADSPTTPEK 155
Query: 147 --LFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
++T G GQLG GD +++ P +V+ + + CG + +++ GN+V+
Sbjct: 156 RSVYTWGTNRKGQLGVVGDSITNA-PRRVT--LGSKAISVCCGEEFTAAIVE---GNEVF 209
Query: 204 GFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+G K Q+ S + +S+P + +G +IV +S + AA S G++ WG
Sbjct: 210 VWGYNKSRQI-CSNNSDEIISIPVKPFLGR---DIVELSCTKNYIAARSGVGNVCVWGSN 265
Query: 263 FNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ +H+LVL+ GE+ G S LS V+S+
Sbjct: 266 -EQVCRIGDDKFINFPNKIKQISASTSHILVLSEKGEIFSWGNSEDNQLSHKLDVNSS 322
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 116 (45.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 141 VSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++++G + +CG +FGQLG HG R P + K V IA G+RH++ +
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI 59
Query: 199 GNQVYGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
Q +G G G+R G + + P GL + + + + A D SA+L+ G
Sbjct: 60 VFQ-WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 256 LYTWG 260
+Y WG
Sbjct: 119 VYVWG 123
Score = 105 (42.0 bits), Expect = 0.00086, P = 0.00086
Identities = 41/132 (31%), Positives = 60/132 (45%)
Query: 91 GKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G+V S G S GQLG HG + P+ + H+ + I+AG H+ + SG +F
Sbjct: 6 GQVLSCGSNSFGQLGVPHGPR-RCVVPQAIEL---HKEKVVCIAAGLRHAVAATASGIVF 61
Query: 149 TCGDG--TFGQ-LGHGD----YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
G G + G+ L G + + P +V+ N + G HS L D +
Sbjct: 62 QWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHS-ASLTDA--GE 118
Query: 202 VYGFGSGKRGQL 213
VY +GS K GQL
Sbjct: 119 VYVWGSNKHGQL 130
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 160 (61.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 98 RGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
+ SG+ G + YP FD + +S G++HS + ++G ++T G G G
Sbjct: 874 KDGSGERGEKDASKITTYPPGSVRFDCELRAV-QVSCGFHHSVVLMENGDVYTFGYGQHG 932
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLGHGD S P V + + Q+ G H+ LL D QV+ FGS +GQLG
Sbjct: 933 QLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHTAALLMD---GQVFTFGSFSKGQLG 986
Score = 103 (41.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
++ +Q++ G HS V+ EN + T+G+G+HGQLG G+ + P +V TQ
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA---LPGPSTQ- 957
Query: 396 EVFCGSGFTYAI 407
V GS T A+
Sbjct: 958 -VTAGSNHTAAL 968
Score = 89 (36.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVS-KDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
H+L++ +D G+ ++ GS +G+ G S K R +S P+ I + +V + N
Sbjct: 555 HALLVAED--GS-IFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGS 611
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCXXXXXXXXXXXXXXLGWNHVLVLTGDGEVLMLGGS 306
S+ +S +G LY +G+ SD + +G H VL +GEV G +
Sbjct: 612 SSVISKDGELYMFGKDA-IYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVN 670
Query: 307 HHG 309
+ G
Sbjct: 671 NKG 673
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 35 KVWSWGAGTDGQLG--TGRLH 53
+VW++G GQ G TG ++
Sbjct: 663 EVWTFGVNNKGQCGRDTGAMN 683
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+V T P + NL G+ + + G + AV + TW
Sbjct: 2554 KVVKTGPSGHNIRSCPNLRGIPIGMLVLGNKVKAVGEVTNSEGTW 2598
>UNIPROTKB|O75426 [details] [associations]
symbol:FBXO24 "F-box only protein 24" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=NAS] [GO:0016567 "protein ubiquitination" evidence=NAS]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
INTERPRO:IPR000408 Pfam:PF00415 SUPFAM:SSF81383 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH236956 EMBL:CH471091
EMBL:AF053356 GO:GO:0004842 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0000151 EMBL:AF174604 EMBL:AL136811
EMBL:AK301864 EMBL:AK302252 EMBL:AC069281 EMBL:BC067293
IPI:IPI00025705 IPI:IPI00219503 IPI:IPI00939223 IPI:IPI00943736
RefSeq:NP_001156971.1 RefSeq:NP_036304.2 RefSeq:NP_277041.1
UniGene:Hs.283764 ProteinModelPortal:O75426 SMR:O75426
IntAct:O75426 STRING:O75426 PhosphoSite:O75426 PaxDb:O75426
PRIDE:O75426 Ensembl:ENST00000241071 Ensembl:ENST00000360609
Ensembl:ENST00000427939 Ensembl:ENST00000465843
Ensembl:ENST00000468962 GeneID:26261 KEGG:hsa:26261 UCSC:uc003uvl.1
UCSC:uc003uvm.1 CTD:26261 GeneCards:GC07P100181 HGNC:HGNC:13595
MIM:609097 neXtProt:NX_O75426 PharmGKB:PA28037 eggNOG:NOG327680
HOGENOM:HOG000253007 HOVERGEN:HBG051571 InParanoid:O75426 KO:K10304
OMA:EPTQVHY OrthoDB:EOG40ZQX6 PhylomeDB:O75426 GenomeRNAi:26261
NextBio:48517 ArrayExpress:O75426 Bgee:O75426 CleanEx:HS_FBXO24
Genevestigator:O75426 GermOnline:ENSG00000106336 Uniprot:O75426
Length = 580
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
I + G+NH G V + G +F G+ +GQLG GD P +V ++ + + + CG+
Sbjct: 359 ILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVC-YLQRPI-TLWCGL 416
Query: 188 RHSLVLLKDC-LGNQVYGFGSGKRGQL-GVSKDRIRSVSLPQVTIGL 232
HSLVL + ++ G G G G+L G K V L QV + L
Sbjct: 417 NHSLVLSQSSEFSKELLGCGCGAGGRLPGWPKGSASFVKL-QVKVPL 462
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 125 (49.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 36/92 (39%), Positives = 46/92 (50%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHH-----GMLSDPERVSSTRPLSV--ALEKVSNLDGVKVI 339
G HVL+LT G V S G L P +TRP A +V +GVKV
Sbjct: 258 GLEHVLLLTSSGRVFSAVSSTENFPSFGQLGVPGLTWATRPPGPVDAPHEVKTPNGVKVA 317
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
QIA G HS ++T+N ++ +G GQLGLG
Sbjct: 318 QIATGDYHSLLLTKNGNVLAFGDNSFGQLGLG 349
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 237 IVGISANGDRSAALSAEGHLYT 258
++ +S + DR ALS++G +Y+
Sbjct: 187 LISLSMSHDRIVALSSDGKVYS 208
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 141 VSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++++G + +CG +FGQLG HG R P + K V IA G+RH++ +
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI 59
Query: 199 GNQVYGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
Q +G G G+R G + + P GL + + + + A D SA+L+ G
Sbjct: 60 VFQ-WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 256 LYTWG 260
+Y WG
Sbjct: 119 VYVWG 123
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 103 (41.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 31/87 (35%), Positives = 40/87 (45%)
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG H ++LT DGEV G S P + + P+ LE L G VI +A G+
Sbjct: 48 LGVKHGVLLTEDGEVYSFGTLP--WRSGPVEICPSSPI---LENA--LVGQYVITVATGS 100
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGN 372
HS VT+N WG GQ + N
Sbjct: 101 FHSGAVTDNGVAYMWGENSAGQCAVAN 127
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 96 (38.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 304 GGSHHGMLSD---PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + H S P+R S+ P V L + + VKV ++ G H+ ++ +R + T+
Sbjct: 735 GRAQHVQFSSTAAPQR-STLHPSRVILSQGPH--DVKVSSVSCGNFHTVLLASDRRVFTF 791
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFT 404
G HGQLG+G+T + P+ V L DT + +V GS T
Sbjct: 792 GSNCHGQLGVGDTLSKNTPQQVILPS-----DTVIVQVAAGSNHT 831
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H ++L D V G + HG L + +S P V L D V ++Q+AAG+ H+
Sbjct: 778 HTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPS----DTV-IVQVAAGSNHTI 832
Query: 350 VVTENRAIMTWGWGEHGQL 368
+ + ++ T+G GQL
Sbjct: 833 LRANDGSVFTFGAFGKGQL 851
Score = 87 (35.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 38/165 (23%), Positives = 70/165 (42%)
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-D-- 162
H + VD + + + F + + G F + + + C Q+ G D
Sbjct: 478 HPQTVDLHFTREMAFIQARSGKVYYAGNGTRFGLFETGNNWMELCLPEPIVQISVGIDTI 537
Query: 163 -YRSHSSPVKVSSFVNKN----VHQIACGMRHSLVLLKDCLGNQVYGFGS--GKRGQLGV 215
+RS + ++S +K + ++ R +V + C VYG+ S GK G+
Sbjct: 538 MFRSGAGHGWIASVDDKKRNGRLRRLVPSNRRKIVHV--CASGHVYGYVSENGKIFMGGL 595
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
R+ +VS Q+ GL ++ I ++ A++ GHL+TWG
Sbjct: 596 HTMRV-NVS-SQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWG 638
>UNIPROTKB|I3LMD9 [details] [associations]
symbol:FBXO24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001810 InterPro:IPR018527 PROSITE:PS00202
PROSITE:PS50181 SMART:SM00256 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 SUPFAM:SSF81383 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 OMA:EPTQVHY
GeneTree:ENSGT00390000017455 EMBL:FP565722
Ensembl:ENSSSCT00000031465 Uniprot:I3LMD9
Length = 616
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
I + G+NH G V + G +F G+ +GQLG GD P +V ++ + + + CG+
Sbjct: 396 ILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVH-YLQRPI-ALWCGL 453
Query: 188 RHSLVLLKDC-LGNQVYGFGSGKRGQL 213
HSLVL + ++ G G G G+L
Sbjct: 454 NHSLVLSQGSDFSKELLGCGCGAGGRL 480
>MGI|MGI:1918426 [details] [associations]
symbol:Fbxo24 "F-box protein 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
MGI:MGI:1918426 INTERPRO:IPR000408 Pfam:PF00415 SUPFAM:SSF81383
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CTD:26261
eggNOG:NOG327680 HOGENOM:HOG000253007 HOVERGEN:HBG051571 KO:K10304
OMA:EPTQVHY OrthoDB:EOG40ZQX6 EMBL:AK016870 IPI:IPI00283689
RefSeq:NP_081984.1 UniGene:Mm.474695 ProteinModelPortal:Q9D417
SMR:Q9D417 STRING:Q9D417 PhosphoSite:Q9D417 PRIDE:Q9D417
Ensembl:ENSMUST00000031732 GeneID:71176 KEGG:mmu:71176
UCSC:uc009adc.1 GeneTree:ENSGT00390000017455 InParanoid:Q9D417
ChiTaRS:FBXO24 NextBio:333227 Bgee:Q9D417 CleanEx:MM_FBXO24
Genevestigator:Q9D417 GermOnline:ENSMUSG00000029719 Uniprot:Q9D417
Length = 589
Score = 126 (49.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G+NH G V + G +F G+ +GQLG GD P +V ++ + + + CG+ HSLVL
Sbjct: 375 GYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVH-YLQRPI-ALWCGLNHSLVL 432
Query: 194 LKDC-LGNQVYGFGSGKRGQL 213
+ ++ G G G G+L
Sbjct: 433 SQTSDFSKELLGCGCGAGGRL 453
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 96 (38.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 304 GGSHHGMLSD---PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + H S P+R S+ P V L + + VKV ++ G H+ ++ +R + T+
Sbjct: 735 GRAQHVQFSSTAAPQR-STLHPSRVILSQGPH--DVKVSSVSCGNFHTVLLASDRRVFTF 791
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFT 404
G HGQLG+G+T + P+ V L DT + +V GS T
Sbjct: 792 GSNCHGQLGVGDTLSKNTPQQVILPS-----DTVIVQVAAGSNHT 831
Score = 94 (38.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H ++L D V G + HG L + +S P V L D V ++Q+AAG+ H+
Sbjct: 778 HTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPS----DTV-IVQVAAGSNHTI 832
Query: 350 VVTENRAIMTWGWGEHGQL 368
+ + ++ T+G GQL
Sbjct: 833 LRANDGSVFTFGAFGKGQL 851
Score = 87 (35.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/165 (23%), Positives = 70/165 (42%)
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-D-- 162
H + VD + + + F + + G F + + + C Q+ G D
Sbjct: 478 HPQTVDLHFTREMAFIQARSGKVYYAGNGTRFGLFETGNNWMELCLPEPIVQISVGIDTI 537
Query: 163 -YRSHSSPVKVSSFVNKN----VHQIACGMRHSLVLLKDCLGNQVYGFGS--GKRGQLGV 215
+RS + ++S +K + ++ R +V + C VYG+ S GK G+
Sbjct: 538 MFRSGAGHGWIASVDDKKRNGRLRRLVPSNRRKIVHV--CASGHVYGYVSENGKIFMGGL 595
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
R+ +VS Q+ GL ++ I ++ A++ GHL+TWG
Sbjct: 596 HTMRV-NVS-SQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWG 638
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 113 (44.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD-RIRSVSLPQVTIGLHDIEIV 238
VH + HS V+ D + N +Y G G+ G+LG+S D R+R +P V L D ++
Sbjct: 322 VHNVVLSKFHSAVITTDPVSN-LYICGVGRGGRLGLSDDQRVRFTYVP-VQGALADRKVT 379
Query: 239 GISANGDRSAALSAEGHLYTWG 260
+ D + A++ +G L+TWG
Sbjct: 380 QVVLGQDHTMAVTDKGELWTWG 401
Score = 54 (24.1 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 17/81 (20%), Positives = 39/81 (48%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV--ALEKVSNL-----DGVKVI 339
G + +TG G++ ++G +H+ +S S+T P + ++ + + DGVK +
Sbjct: 563 GGETIAAVTGRGDLFVMGLNHNADVSSS--ASTTNPAKIKGSVSQPQCIWRAWKDGVKSV 620
Query: 340 QIAAGAEHSAVVTENRAIMTW 360
+ +H +V+ ++ W
Sbjct: 621 GVG---DHGSVIIATKSGAVW 638
Score = 50 (22.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPK 116
G ++FS+G + LG G+ D YP+
Sbjct: 250 GDELFSFGSNKNMSLGVGDESDRQYPE 276
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 122 (48.0 bits), Expect = 0.00066, P = 0.00066
Identities = 49/187 (26%), Positives = 96/187 (51%)
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLG--HGEMV--DALY--PKPVTFFDGHRYTITHI 131
H LALT G ++SWG+ SG+LG + E+ D + P+ ++ F Y I +
Sbjct: 258 HSLALTK-----FGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKD--YQIIGM 310
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHS 190
+AG ++S +D+ +++ G GQLG D+ S S+P +V+ ++ +H + C R +
Sbjct: 311 AAGKSYSVAWTDTD-IYSWGLNN-GQLGISDHISVVSTPRRVAGLLSPVIHAV-CTTRAT 367
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ LL++ N + F + + +L + D S+ + + + L + + A+ ++ A L
Sbjct: 368 ICLLQN---NSIIAFCNYNQVKLPFNVDFGSSLKVTKHPLSLTRFNVRKLLASENKLAVL 424
Query: 251 SAEGHLY 257
+ G +Y
Sbjct: 425 TELGEVY 431
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 416 379 0.00089 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 222
No. of states in DFA: 618 (66 KB)
Total size of DFA: 255 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.37u 0.09s 27.46t Elapsed: 00:00:02
Total cpu time: 27.51u 0.09s 27.60t Elapsed: 00:00:02
Start: Mon May 20 23:48:58 2013 End: Mon May 20 23:49:00 2013
WARNINGS ISSUED: 1