BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014875
(416 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/409 (64%), Positives = 313/409 (76%), Gaps = 28/409 (6%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLA 81
E E ++ V++WSWGAGTDGQLGT RL DE PQLL+L SS +S+LACGGAHVLA
Sbjct: 3 ENERDKGGEVEIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLA 62
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
LT+ GKV +WGRG+SGQLGHG+MV +L PK V + + +TH+SAGW+HSGFV
Sbjct: 63 LTTD-----GKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLE--SFVMTHVSAGWSHSGFV 115
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
SD+GCLFTCGDG+FGQLGHGD +SH SPVKVS F +K+V QIACGMRHSLVLLK G+Q
Sbjct: 116 SDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK---GDQ 172
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VYGFGSGKRGQLGVS D RS+S+PQ T+GL +EI+ I ANGD SAALSA GHLYTWGR
Sbjct: 173 VYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGR 232
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
GF STSDV+CP+ LPSSL F+Q ALGWNH+LVLTG GEV MLGG+ HG+L DP++ S +
Sbjct: 233 GFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVK 292
Query: 322 PLSVA--------------LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
LSV LEKV LDG+ V+QIAAGAEHSA+VTENR I TWGWGEHGQ
Sbjct: 293 HLSVIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQ 352
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
LGLGNT DQI P+ V LG + T ++V+CGSGFT+AI + +PSQT
Sbjct: 353 LGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI-KAVIPSQT 400
>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/411 (64%), Positives = 314/411 (76%), Gaps = 20/411 (4%)
Query: 18 NNAKPKIEEEEEEQQ-VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLA 73
+N +EE E ++ V++WSWGAGTDGQLGT RL DE PQLL+L SS +S+LA
Sbjct: 3 HNTNTMMEENERDKGGEVEIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLA 62
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CGGAHVLALT+ GKV +WGRG+SGQLGHG+MV +L PK V + + +TH+SA
Sbjct: 63 CGGAHVLALTTD-----GKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLE--SFVMTHVSA 115
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GW+HSGFVSD+GCLFTCGDG+FGQLGHGD +SH SPVKVS F +K+V QIACGMRHSLVL
Sbjct: 116 GWSHSGFVSDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVL 175
Query: 194 LKDC--LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
LK G+QVYGFGSGKRGQLGVS D RS+S+PQ T+GL +EI+ I ANGD SAALS
Sbjct: 176 LKGTGLSGDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAALS 235
Query: 252 AEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
A GHLYTWGRGF STSDV+CP+ LPSSL F+Q ALGWNH+LVLTG GEV MLGG+ HG+L
Sbjct: 236 ANGHLYTWGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVL 295
Query: 312 SDPERVSSTRPLSVA-----LEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEH 365
DP++ S + LS LEKV LDG+ V+QIAAGAEHSA+VT N I TWGWGEH
Sbjct: 296 GDPQKGSQVKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVTGNILVIKTWGWGEH 355
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
GQLGLGNT DQI P+ V LG + T ++V+CGSGFT+AI + +PSQT
Sbjct: 356 GQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI-KAVIPSQT 405
>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/395 (63%), Positives = 306/395 (77%), Gaps = 28/395 (7%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGA 77
+ K +EEE +QQ ++WSWGAGT+GQLGTG+L DE PQLL+L SS S+S LACGGA
Sbjct: 3 EAKRDEEESKQQ--QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGA 60
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
HV+ALTS GG+VF+WGRG++GQLGHGEM+++L+PKPV+ ITH+SAGW+H
Sbjct: 61 HVIALTS-----GGRVFTWGRGTTGQLGHGEMLNSLHPKPVSSL--QSCVITHVSAGWSH 113
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
SGFVSD G LFTCGDG+FGQLG G+YRS S+PVKV F N V+QIACGMRHSLVLL
Sbjct: 114 SGFVSDIGLLFTCGDGSFGQLGQGNYRSQSTPVKVDYFANNFVNQIACGMRHSLVLLN-- 171
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
GNQVYGFGSGKRGQLG+S+D+ +S++LPQVT GL D++IV ISANGD SAA+SA+GHLY
Sbjct: 172 -GNQVYGFGSGKRGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLY 230
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
TWGRGF SD N PQ SSL ++AALGWNH L+LTGD EVLMLGG++HG+L D E++
Sbjct: 231 TWGRGFAGASDANFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKM 290
Query: 318 SST--RPLS---VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
S+ RP AL +V LDGVKV++IAAGAEHSA +TWGWGEHGQLGLGN
Sbjct: 291 SAVKHRPEDSPGTALNEVIGLDGVKVVKIAAGAEHSA--------LTWGWGEHGQLGLGN 342
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
T DQ P+ V+L + QN++ L V+CGSGFT+AI
Sbjct: 343 TNDQTIPQTVSLIPDIQNKEASLNVYCGSGFTFAI 377
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/397 (61%), Positives = 300/397 (75%), Gaps = 16/397 (4%)
Query: 17 INNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG 76
+ K E+++++ +VWSWGAGT+GQLGT L DE PQLL+ SLSS+S LACGG
Sbjct: 1 MEEPKKTENEDDKDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGG 60
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGW 135
AHV+ALTS GKV SWGRG+SGQLGHG +V ++LYPK VT DG Y ITH+SAGW
Sbjct: 61 AHVIALTSA-----GKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDG--YFITHVSAGW 113
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
HSGFVSD+GC+FTCGDG+FGQLGHGD+ SH SPVKVS FV+++V Q+ACGMRHSLVLLK
Sbjct: 114 GHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLK 173
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
GNQVYGFGSGKRGQLGVS DR++SV++P+V G +EI GI+ANGD SAA+S +GH
Sbjct: 174 ---GNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGH 230
Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+YTWGRGF D PQ L SSL+F++ ALGWNH L ++G+GEV MLGG+H G+LSD +
Sbjct: 231 VYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQ 290
Query: 316 RVSSTRPL----SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+S + L V LEKV LDG K+ IA GAEHS +VTE+ I TWGWGEHGQLGLG
Sbjct: 291 NISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLG 350
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+T D+I P V+LG + N + VFCGSGFT+A++
Sbjct: 351 DTRDRISPVTVSLGYDL-NEAASVIVFCGSGFTFAVT 386
>gi|357486571|ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355514908|gb|AES96531.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 615
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/421 (59%), Positives = 297/421 (70%), Gaps = 39/421 (9%)
Query: 24 IEEEEE---EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVL 80
+EE E+ E+++ ++WSWGAGTDGQLGTGRL DE PQ L+LS S S+ ACGGAHV+
Sbjct: 198 MEESEQVKIEEKIERLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPSVSSL-ACGGAHVI 256
Query: 81 ALTSPS---------------------------SVIGGKVFSWGRGSSGQLGHGEMVD-A 112
ALTS GKV SWGRG+SGQLGHGE+V+
Sbjct: 257 ALTSAQMEKVVRDIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNL 316
Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
LYPK +T D Y ITH+SAGW HSGFVSDSGCLFTCGDG+FGQLGHGDY SHSSP+KV
Sbjct: 317 LYPKAITSLD--NYFITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSPIKV 374
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
SSFV++NV Q+ACGMRHSLVLLK CL NQVYGFGSGKRGQLGVSKD+I+S++LP+V G
Sbjct: 375 SSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGF 434
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
D EIVGISANGD SAALS +GHLYTWGRGF D + PQ L S+ F++ LGWNH L
Sbjct: 435 EDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHAL 494
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPL----SVALEKVSNLDGVKVIQIAAGAEHS 348
+TG+G+V MLGG+H G+LSD + L LEK LDG K+ IA GAEHS
Sbjct: 495 AMTGEGKVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHS 554
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+VTEN I TWGWGEHGQLGLG+ D+I P VNLG + N + V+CGSGFT+A++
Sbjct: 555 VLVTENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDL-NEAASIRVYCGSGFTFALT 613
Query: 409 R 409
+
Sbjct: 614 K 614
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/388 (62%), Positives = 293/388 (75%), Gaps = 24/388 (6%)
Query: 26 EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP 85
+EEEEQQV WSWGAGTDGQLGT +L DEL PQLL+L+SL S+SMLACGGAHV+ALTS
Sbjct: 10 DEEEEQQV---WSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSD 66
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
GKVF+WGRGSSGQLGHG++++ PK V+FFDG Y IT +AGW+HSGFVSDSG
Sbjct: 67 -----GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDG--YVITQAAAGWSHSGFVSDSG 119
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
CLFTCG+G+FGQLGHGD S +P KVS F N++V +ACGMRHSLVLL GNQV GF
Sbjct: 120 CLFTCGNGSFGQLGHGDNMSLRTPAKVSYFSNESVKMVACGMRHSLVLLA---GNQVCGF 176
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
GSGKRGQLG + D +SV+LP V GL D+E+ ISANGD SAA+SA+G ++WGRGF +
Sbjct: 177 GSGKRGQLGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCA 236
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER----VSSTR 321
DV PQ LPSSLSF + A+GWNH L+LT DGEV LG + + PE+ + S+
Sbjct: 237 GPDVQTPQCLPSSLSFRKVAVGWNHALLLTVDGEVFKLGNT---LNKQPEKQQLQIDSSE 293
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
L L KVS+ DGVKV+QIAAGAEHSA VTEN + TWGWGEHGQLGLGNT DQ P++
Sbjct: 294 AL---LAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLGNTNDQTSPQL 350
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V++G R +++V+CGSGFTYA+ R
Sbjct: 351 VSVG-SIDLRTKEIKVYCGSGFTYAVRR 377
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/396 (61%), Positives = 294/396 (74%), Gaps = 19/396 (4%)
Query: 18 NNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGA 77
N + + + +E EQ +VWSWGAGT+GQLGT L DE PQLL+ SLSS+S LACGGA
Sbjct: 5 NKTENEDDRDESEQ---RVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGA 61
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWN 136
HV+ALTS GK SWGRG+SGQLGHGE+V + LYPK VT DG Y ITH+SAGW+
Sbjct: 62 HVIALTSA-----GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDG--YFITHVSAGWS 114
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HSGFVSD+G +FTCGDG+FGQLGHGD SH SPVKVS FV+ +V Q+ACGMRHSLVLLK
Sbjct: 115 HSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLK- 173
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
GNQVYGFGSGKRGQLGVS DR++SV++P+V G +EIVG +ANGD SAA+S +GH+
Sbjct: 174 --GNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHV 231
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
YTWGRGF D + PQ L SSL+F++ ALGWNH L ++G+GEV MLGG+H G+LSD +
Sbjct: 232 YTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQN 291
Query: 317 VSSTRPL----SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ + LEKV LDG K+ IAAGAEHS +VTE+ I TWGWGEHGQLGLG+
Sbjct: 292 IGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGD 351
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
T DQ P V+L D N + VFCGSGFT+A++
Sbjct: 352 TRDQTSPVTVSL-DYDLNEAASIRVFCGSGFTFAVT 386
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/386 (62%), Positives = 292/386 (75%), Gaps = 15/386 (3%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
E + +E++ +VWSWGAGTDGQLGT +L DEL PQLL+L+SL S+SMLACGGAHV+ALTS
Sbjct: 6 ETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTS 65
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
GGKVF+WGRGSSGQLGHG++++ PK V+FFD IT +AGW+HSGFVSDS
Sbjct: 66 -----GGKVFTWGRGSSGQLGHGDILNITLPKLVSFFD--DSVITQAAAGWSHSGFVSDS 118
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
GC+FTCG+G+FGQLGHGD S S+P KVS F N +V +ACGMRHSLVL GNQV G
Sbjct: 119 GCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFA---GNQVCG 175
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
FGSGKRGQLG S DRI+SV+LP V GL D+E+V ISANGD SAA+SA+G ++WGRGF
Sbjct: 176 FGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFC 235
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
DV+ PQSLPS LSF + A+GWNH L+LT DGEV LG + + PE+ S
Sbjct: 236 GGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGST---LNKQPEKQQLQIDSS 292
Query: 325 VAL-EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
AL EKV + DGVKV+QIAAGAEHSA VTEN + TWGWGEHGQLGLGNT DQ P++V+
Sbjct: 293 EALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVS 352
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISR 409
LG R +++V+CGSGFTYA+ R
Sbjct: 353 LG-SIDLRTKEIKVYCGSGFTYAVKR 377
>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
Length = 387
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/402 (59%), Positives = 292/402 (72%), Gaps = 23/402 (5%)
Query: 19 NAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGG 76
N K K++E EE + +VWSWGAGTDGQLGTG+L DE PQLL SLS +S LACGG
Sbjct: 5 NKKVKVKETEEREHEQQVWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGG 64
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AHV+AL S GKV +WGRG+SGQLGHG M+ +++P+PVTF D + ITHISAGW+
Sbjct: 65 AHVIALNSGD----GKVLTWGRGTSGQLGHGNMLSSVHPQPVTFLD--SFVITHISAGWS 118
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HSGFVSD GC+FTCGDG+FGQLGHGD SH++PV+VS F N++VHQIACGMRHSLVLLK
Sbjct: 119 HSGFVSDKGCVFTCGDGSFGQLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLK- 177
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
GNQVYGFGSGKRGQLG+SKD+I+S+SLP VT G DI+I I NGD SAALS +GHL
Sbjct: 178 --GNQVYGFGSGKRGQLGISKDKIKSISLPLVTCGFEDIKINSIITNGDHSAALSVDGHL 235
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
YTWGRGF TSDV P+ L SSL F + ALGWNH L LTG+ + S
Sbjct: 236 YTWGRGFPGTSDVFTPRHLVSSLQFIKVALGWNHALALTGNFFFFCVWMS---------V 286
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--ENRAIMTWGWGEHGQLGLGNTC 374
P ++VS LDG+KV+ IAAG+EHSA++T + I TWGWGEHGQLGLG+T
Sbjct: 287 CVYCDPTHAIFDRVSILDGMKVVDIAAGSEHSALLTGKMDGTIKTWGWGEHGQLGLGSTK 346
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
DQ +P+ V+L E +N++ L+V+CGSGFT+ + R SQT
Sbjct: 347 DQTNPQSVSLDHEAENQEINLKVYCGSGFTFVV-RSLSTSQT 387
>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 608
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/388 (59%), Positives = 286/388 (73%), Gaps = 16/388 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
++WSWGAGTD QLGTGRL D PQL+ SLSS +S L+CGGAHV+ALT+ GG
Sbjct: 229 ELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA-----GG 283
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V +WGRG+SGQLG G+M+ +L+PKPV Y ITH+SAGW+HSGFVSD G L+TCG
Sbjct: 284 GVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS--YFITHVSAGWSHSGFVSDEGKLYTCG 341
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FGQLGHGDY+ P +V F +K+V +IACGMRHSL L+K G QVYGFG+GKRG
Sbjct: 342 DGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRG 401
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+SK +I++V+LP ++ L EIVGI+A GD SAALSAEGHLYTWGRGF STSDV
Sbjct: 402 QLGISK-KIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWGRGFKSTSDVYS 460
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-----SVA 326
PQ LPS SFS+ ALGWNH LVLT +GE+ MLGG HHG LSD E ++S + L
Sbjct: 461 PQHLPSPSSFSKVALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDN 520
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ V L G+KV+ IAAGAEHS +VTE+ + TWGWGEHGQLGLG+TCD +P+ VNL
Sbjct: 521 FQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNL 580
Query: 387 EFQNRDTQLEVFCGSGFTYAISRHCLPS 414
+ ++ ++V+CGSGFT A++ LP+
Sbjct: 581 KLESTAYDVKVYCGSGFTVAVATSNLPN 608
>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
Length = 441
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/436 (55%), Positives = 294/436 (67%), Gaps = 60/436 (13%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
E + +E++ +VWSWGAGTDGQLGT +L DEL PQLL+L+SL S+SMLACGGAHV+ALTS
Sbjct: 6 ETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTS 65
Query: 85 --PSSV--------------------IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
P + GGKVF+WGRGSSGQLGHG++++ PK V+FFD
Sbjct: 66 GKPPKISLIKGMLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFD 125
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
IT +AGW+HSGFVSDSGC+FTCG+G+FGQLGHGD S S+P KVS F N +V
Sbjct: 126 --DSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKM 183
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ACGMRHSLVL GNQV GFGSGKRGQLG S DRI+SV+LP V GL D+E+V ISA
Sbjct: 184 VACGMRHSLVLFA---GNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISA 240
Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
NGD SAA+SA+G ++WGRGF DV+ PQSLPS LSF + A+GWNH L+LT DGEV
Sbjct: 241 NGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFK 300
Query: 303 LGGSHHGMLSDPERVSSTRPLSVAL-EKVSNLDGVKVIQIAAGAEHSAVVT--------- 352
LG + + PE+ S AL EKV + DGVKV+QIAAGAEHSA VT
Sbjct: 301 LGST---LNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTGKRGGAILL 357
Query: 353 -------------------ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 393
EN + TWGWGEHGQLGLGNT DQ P++V+LG R
Sbjct: 358 FLSSLHSANIKQTTFECLAENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLG-SIDLRTK 416
Query: 394 QLEVFCGSGFTYAISR 409
+++V+CGSGFTYA+ R
Sbjct: 417 EIKVYCGSGFTYAVKR 432
>gi|449478696|ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 577
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/342 (61%), Positives = 254/342 (74%), Gaps = 16/342 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
++WSWGAGTD QLGTGRL D PQL+ SLSS +S L+CGGAHV+ALT+ GG
Sbjct: 229 ELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTA-----GG 283
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V +WGRG+SGQLG G+M+ +L+PKPV Y ITH+SAGW+HSGFVSD G L+TCG
Sbjct: 284 GVLTWGRGNSGQLGLGDMISSLHPKPVMRLGS--YFITHVSAGWSHSGFVSDEGKLYTCG 341
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FGQLGHGDY+ P +V F +K+V +IACGMRHSL L+K G QVYGFG+GKRG
Sbjct: 342 DGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRG 401
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+SK +I++V+LP ++ L EIVGI+A GD SAALSAEGHLYTWGRGF STSDV
Sbjct: 402 QLGISK-KIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWGRGFKSTSDVYS 460
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-----SVA 326
PQ LPS SFS+ ALGWNH LVLT +GE+ MLGG HHG LSD E ++S + L
Sbjct: 461 PQHLPSPSSFSKVALGWNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDN 520
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ V L G+KV+ IAAGAEHS +VTE+ + TWGWGEHGQL
Sbjct: 521 FQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQL 562
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 253 EGHLYTWGRGFNST------SDVNCPQ-----SLPSSLSFSQAALGWNHVLVLTGDGEVL 301
E L++WG G ++ D N PQ SL S+ + S + G HV+ LT G VL
Sbjct: 227 EQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVL 286
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L + +SS P + V L + ++AG HS V++ + T G
Sbjct: 287 TWGRGNSGQLGLGDMISSLHP-----KPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCG 341
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G GQLG G+ + P+ V F ++ ++ CG + A+ +
Sbjct: 342 DGSFGQLGHGDYQLRCFPEEVLF---FSDKHVD-KIACGMRHSLALVK 385
>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
Length = 408
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/401 (50%), Positives = 247/401 (61%), Gaps = 29/401 (7%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVLAL 82
E EEE V WSWGAGTDGQLG G D PQ LL S VS +A GGAH +AL
Sbjct: 16 REPEEEAPVEWTWSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIAL 75
Query: 83 TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
TS G+VF+WGRG+ GQLGHG + + +PK V F + H T+T +SAGWNHSGF +
Sbjct: 76 TSD-----GEVFTWGRGTHGQLGHGNLDNMPHPKLVKFLENH--TVTCVSAGWNHSGFAT 128
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
DSG LF CGDG+FGQLG GD S + P +V+ F ++ ++A GMRHSLVLLKD N V
Sbjct: 129 DSGQLFMCGDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKD---NSV 185
Query: 203 YGFGSGKRGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
YGFGS +RGQ+G RI +S ++P++ G + +IV I ANGD SAAL GHLY WGR
Sbjct: 186 YGFGSARRGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGR 245
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE------ 315
D + P + SLS SQ ALGW+H LVL+ GE+ LG H P
Sbjct: 246 ALIGQHDDDQPSEILPSLSVSQVALGWHHALVLSA-GELYTLGVYRHQKCDLPGLGNVLG 304
Query: 316 RVSSTRPLSV---------ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
+ S TR S LE V LDG +V QIA+G EHSA+VT+ + TWGWGEHG
Sbjct: 305 QQSDTRATSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDKGTVFTWGWGEHG 364
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
QLGLG+T D + P+ VN+GD Q V+CGSGFT A+
Sbjct: 365 QLGLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 405
>gi|357125330|ref|XP_003564347.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 400
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 250/390 (64%), Gaps = 29/390 (7%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGKVF 94
W+WGAGTDGQLG+G L D P L L VS +A GGAH +ALTS G+VF
Sbjct: 20 WTWGAGTDGQLGSGGLEDHHLPHPLLLPPRCRGRVSFVAGGGAHAIALTSD-----GEVF 74
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWGRG+ GQLGHG + + P VTFF YT+T +SAGWNHSGF +DSG LF CGDG+
Sbjct: 75 SWGRGTHGQLGHGNVENIPTPMLVTFFK--NYTVTCVSAGWNHSGFATDSGQLFMCGDGS 132
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG GD +S + P +VSSF K+V ++A GMRHSLVLLKD N +YGFGS +RGQ+G
Sbjct: 133 FGQLGTGDNQSRNLPFEVSSFTTKHVEKLAFGMRHSLVLLKD---NSIYGFGSARRGQVG 189
Query: 215 VSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
S + + + ++P++ G + +IV + ANGD SAAL G LY WGR D PQ
Sbjct: 190 KSVCKNQKLHNIPRLIDGFPNRKIVNLYANGDHSAALDESGQLYIWGRALVGEHDDEQPQ 249
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST----RPLSVA--- 326
++ SLS SQ ALGW+H L+L+G GE+ +G H P ++T P + +
Sbjct: 250 AVFPSLSISQVALGWHHALLLSG-GELYTIGAYRHQKRETPVLENATAHQFNPTASSSNL 308
Query: 327 --------LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
L KV ++ G +V+QIAAG EHSA+VT+ A+ TWGWGEHGQLGLG+ DQ+
Sbjct: 309 HESSSLSNLVKVPSVHGEQVVQIAAGTEHSALVTDKGAVFTWGWGEHGQLGLGDASDQVV 368
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P+ VNLGD+ L V+CGSGFT A++
Sbjct: 369 PRRVNLGDKSSCSSASLGVYCGSGFTVAVN 398
>gi|218189153|gb|EEC71580.1| hypothetical protein OsI_03953 [Oryza sativa Indica Group]
Length = 403
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 241/394 (61%), Gaps = 32/394 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
V WSWGAGTDGQLG G D PQ L L VS +A GGAH +ALTS G
Sbjct: 17 VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 71
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF+WGRG+ GQLGHG++ + +PK V FF+ Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 72 EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 129
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FGQLG GD + P +V+ F K+V ++A GMRHSLVLLKD N VYGFGS +RG
Sbjct: 130 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKD---NSVYGFGSTRRG 186
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
Q+G + +P++ G D +I I ANGD SAAL G LY WGR D +
Sbjct: 187 QIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQ 246
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS------- 324
P+ + SL SQ ALGW+H LVL+G E+ +G H L DP + S P+
Sbjct: 247 PRPVFPSLGISQVALGWHHALVLSG--ELYTIGAYRHRKL-DPHVLPSAEPVQRLNPATT 303
Query: 325 ----------VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
L KV +DG +V+ IAAG EHSA VT+ + TWGWGEHGQLGLG+TC
Sbjct: 304 SHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTDKGTVFTWGWGEHGQLGLGDTC 363
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
DQ+ P+ VN+GD+ + V+CGSGFT A++
Sbjct: 364 DQVTPQRVNIGDKRPCSSASVNVYCGSGFTIAVN 397
>gi|22202709|dbj|BAC07367.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
Length = 421
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/394 (48%), Positives = 240/394 (60%), Gaps = 32/394 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
V WSWGAGTDGQLG G D PQ L L VS +A GGAH +ALTS G
Sbjct: 15 VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 69
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF+WGRG+ GQLGHG++ + +PK V FF+ Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 70 EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 127
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FGQLG GD + P +V+ F K+V ++A GMRHSLVLLKD N VYGFGS +RG
Sbjct: 128 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKD---NSVYGFGSTRRG 184
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
Q+G + +P++ G D +I I ANGD SAAL G LY WGR D +
Sbjct: 185 QIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQ 244
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS------- 324
P+ + SL SQ ALGW+H LVL+G E+ +G H L DP + S P+
Sbjct: 245 PRPVFPSLGISQVALGWHHALVLSG--ELYTIGAYRHRKL-DPHVLPSAEPVQRLNPATT 301
Query: 325 ----------VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
L KV +DG +V+ IAAG EHSA VT+ + TWGWGEHGQLGLG+TC
Sbjct: 302 SHSHDESSSSSTLVKVPCVDGEQVVHIAAGTEHSASVTDKGTVFTWGWGEHGQLGLGDTC 361
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
DQ+ P+ VN+GD+ + V+CGSGFT A+
Sbjct: 362 DQVTPQRVNIGDKRPCSSASVNVYCGSGFTIALD 395
>gi|302760239|ref|XP_002963542.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
gi|300168810|gb|EFJ35413.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
Length = 360
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/378 (44%), Positives = 218/378 (57%), Gaps = 24/378 (6%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ VWSWGAGT GQLG G + D L PQ ++ L + M ACGGAH A+ GG+V
Sbjct: 1 MAVWSWGAGTQGQLGLGTMIDALLPQAMD-PPLRILDM-ACGGAHAAAILD-----GGRV 53
Query: 94 FSWGRGSSGQLGHGE---MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+WGRG G G E P V FF GHR + ++AGWNH+ FV++SG LFTC
Sbjct: 54 ATWGRGLIGHEGDSEKDAAAVVAVPSVVEFFGGHR--VCEVAAGWNHTAFVTESGELFTC 111
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG FGQLGHGD+ S +P KV + N ++ACGMRH+LVL D G V FG KR
Sbjct: 112 GDGAFGQLGHGDFVSRGTPCKVLAL--SNAFKVACGMRHTLVLSGD--GRVVKAFGLAKR 167
Query: 211 GQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG +S + V+ PQ L + ++ANGD SAALS G LY WG+ F+ S
Sbjct: 168 GQLGSLSSKELNKVASPQAIPSLDSYSVSIVAANGDHSAALSGSGQLYLWGKAFDDQSGA 227
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L F + +LGWNH L LT DGE + G + HG L +S ++ +
Sbjct: 228 YVPFLASEELKFHRVSLGWNHGLGLTEDGEAISWGTNRHGQLGSSRCISERS--NIKFYR 285
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
V L+ +V+ I+AG+EHSA V + TWGWGEHGQLGLG+ D+ HP V +G +
Sbjct: 286 VQGLEKHRVVSISAGSEHSAAVDAAGDLYTWGWGEHGQLGLGHVNDERHPCRVVVGQCQR 345
Query: 390 NRDTQLEVFCGSGFTYAI 407
+R V CGSGFT+A
Sbjct: 346 SR-----VCCGSGFTFAF 358
>gi|302799553|ref|XP_002981535.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
gi|300150701|gb|EFJ17350.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
Length = 360
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/378 (44%), Positives = 218/378 (57%), Gaps = 24/378 (6%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ VWSWGAGT GQLG G + D L PQ ++ L + M ACGGAH A+ GG+V
Sbjct: 1 MAVWSWGAGTQGQLGLGTMIDALLPQAMD-PPLRILDM-ACGGAHAAAILD-----GGRV 53
Query: 94 FSWGRGSSGQLGHGE---MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+WGRG G G E P V FF GHR + ++AGWNH+ FV++SG LFTC
Sbjct: 54 ATWGRGLIGHEGDSEKDAAAVVAVPSVVEFFGGHR--VCEVAAGWNHTAFVTESGELFTC 111
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG FGQLGHGD+ S +P KV + N ++ACGMRH+LVL D G V FG KR
Sbjct: 112 GDGAFGQLGHGDFVSRGTPCKVLAL--SNAFKVACGMRHTLVLSGD--GRVVKAFGLAKR 167
Query: 211 GQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG +S + V+ PQ L + ++ANGD SAALS G LY WG+ F+ S
Sbjct: 168 GQLGSLSSKELNKVASPQAIPSLDSYGVSIVAANGDHSAALSGSGQLYLWGKAFDDQSGA 227
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L F + +LGWNH L LT DGE + G + HG L +S ++ +
Sbjct: 228 YVPFLASEELKFHRVSLGWNHGLGLTEDGEAISWGTNRHGQLGSSRCISERS--NIKFYR 285
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
V L+ +V+ I+AG+EHSA V + TWGWGEHGQLGLG+ D+ HP V +G +
Sbjct: 286 VQGLEKHRVVSISAGSEHSAAVDAAGDLYTWGWGEHGQLGLGHVNDERHPCRVVVGQCQR 345
Query: 390 NRDTQLEVFCGSGFTYAI 407
+R V CGSGFT+A
Sbjct: 346 SR-----VCCGSGFTFAF 358
>gi|125572225|gb|EAZ13740.1| hypothetical protein OsJ_03662 [Oryza sativa Japonica Group]
Length = 325
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 194/331 (58%), Gaps = 36/331 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
V WSWGAGTDGQLG G D PQ L L VS +A GGAH +ALTS G
Sbjct: 15 VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 69
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF+WGRG+ GQLGHG++ + +PK V FF+ Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 70 EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 127
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FGQLG GD + P +V+ F K+V ++A GMRHSLVLLKD N VYGFGS +RG
Sbjct: 128 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLKD---NSVYGFGSTRRG 184
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
Q+G + +P++ G D +I I ANGD SAAL G LY WGR D +
Sbjct: 185 QIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGDHSAALDESGQLYIWGRALIGEHDDDQ 244
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P+ + SL SQ ALGW+H LVL S S L KV
Sbjct: 245 PRPVFPSLGISQVALGWHHALVL------------------------SESSSSSTLVKVP 280
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
+DG +V+ IAAG EHSA VT+ + TWGW
Sbjct: 281 CVDGEQVVHIAAGTEHSASVTDKGTVFTWGW 311
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNST---SDV-NCPQSLPSSLSFSQAAL------GWN 289
++ G + AL+++G ++TWGRG + DV N P P + F + + GWN
Sbjct: 55 VAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPH--PKLVKFFENYMITCVSAGWN 112
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H T G++ M G G L + P VA + V+++A G HS
Sbjct: 113 HSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLPFEVAYFTTKH-----VVRLALGMRHSL 167
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIH--PKVVN------LGDEFQNRD 392
V+ ++ ++ +G GQ+G + + P++++ +G+ + N D
Sbjct: 168 VLLKDNSVYGFGSTRRGQIGRCTRNQKFYDVPRIIDGFPDCKIGNIYANGD 218
>gi|168059919|ref|XP_001781947.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666593|gb|EDQ53243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 415
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 228/426 (53%), Gaps = 66/426 (15%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V +VWSWGAGT GQL G L D L+PQ + LS + + +ACGGAH +A+
Sbjct: 7 RVREVWSWGAGTHGQLACGTLIDALTPQRVEALSDAALIVDIACGGAHGIAVFEC----- 61
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V +WGRG +G LGHG+ P+ ++ G R I+H +AGWNHS FV+D+G L+TC
Sbjct: 62 GDVATWGRGQAGALGHGDETTITVPRFISSLQGIR--ISHAAAGWNHSAFVTDNGALYTC 119
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL---KDCLGNQVYGFGS 207
GDGTFGQLGHG S P +V ++ ++ +ACGMRH+L L + VY FG
Sbjct: 120 GDGTFGQLGHGHTESRLVPGRVEHLSSERINMVACGMRHTLALAVTQGSVCTSIVYAFGF 179
Query: 208 GKRGQLGV--------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
KRGQLG+ SK++ S PQ L +V +SANGD SAAL+ G L+ W
Sbjct: 180 NKRGQLGIQMKTNGSESKNKW-CFSCPQRVDSLDMHGVVSVSANGDHSAALTRMGDLFLW 238
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS- 318
GRG+N D P S L Q +LGW H L L G+ S H E+V+
Sbjct: 239 GRGYNDGPDSQQPHLSHSGLKLIQVSLGWRHGLALAGN--------SFHTYTRRSEKVNV 290
Query: 319 ---------------------STRPLS-VALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
S R +S V +KV G++V I+AG+EHSA V E+
Sbjct: 291 AHKSIEQYTREREGKDGAAEKSQRQISGVDFQKVET-QGMRVSWISAGSEHSAAVLEDGR 349
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLG-------------DEFQNRD-TQLEVFCGSG 402
IM WGW EHGQLGLG+ DQ P +V L D+ + + + +V+CGSG
Sbjct: 350 IMMWGWAEHGQLGLGSLEDQEVPHMVTLASTRLSSGFFSATHDQHASANYVKTKVYCGSG 409
Query: 403 FTYAIS 408
+T+ +S
Sbjct: 410 YTFVVS 415
>gi|212274901|ref|NP_001130726.1| uncharacterized protein LOC100191830 [Zea mays]
gi|194689956|gb|ACF79062.1| unknown [Zea mays]
Length = 274
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 166/274 (60%), Gaps = 20/274 (7%)
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CGDG+FGQLG GD S + P +V+ F ++ ++A GMRHSLVLLKD N VYGFGS +
Sbjct: 2 CGDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKD---NSVYGFGSAR 58
Query: 210 RGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
RGQ+G RI +S ++P++ G + +IV I ANGD SAAL GHLY WGR D
Sbjct: 59 RGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGRALIGQHD 118
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE------RVSSTRP 322
+ P + SLS SQ ALGW+H LVL+ GE+ LG H P + S TR
Sbjct: 119 DDQPSEILPSLSVSQVALGWHHALVLSA-GELYTLGVYRHQKCDLPGLGNVLGQQSDTRA 177
Query: 323 LSV---------ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
S LE V LDG +V QIA+G EHSA+VT+ + TWGWGEHGQLGLG+T
Sbjct: 178 TSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDKGTVFTWGWGEHGQLGLGDT 237
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
D + P+ VN+GD Q V+CGSGFT A+
Sbjct: 238 SDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 271
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 102/259 (39%), Gaps = 38/259 (14%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
G G+ GQLGTG P + + + + LA G H L L +SV G +G
Sbjct: 3 GDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKDNSVYG-----FGSA 57
Query: 100 SSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQ+G + Y P I +I A +HS + +SG L+ G GQ
Sbjct: 58 RRGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGRALIGQ- 116
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL------------KDC----LGNQV 202
H D P ++ + +V Q+A G H+LVL + C LGN V
Sbjct: 117 -HDD----DQPSEI--LPSLSVSQVALGWHHALVLSAGELYTLGVYRHQKCDLPGLGN-V 168
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-- 260
G S R L V L ++ I++ + SA ++ +G ++TWG
Sbjct: 169 LGQQSDTRATSSSHDCSSSLSVLETVPF-LDGEQVAQIASGTEHSALVTDKGTVFTWGWG 227
Query: 261 ----RGFNSTSDVNCPQSL 275
G TSD PQ +
Sbjct: 228 EHGQLGLGDTSDHVAPQRV 246
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+ V F DG + + I++G HS V+D G +FT G G GQLG GD H +P +V+
Sbjct: 192 ETVPFLDGEQ--VAQIASGTEHSALVTDKGTVFTWGWGEHGQLGLGDTSDHVAPQRVN 247
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 26/357 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++SWG G DGQ G G +D+ P + +V +ACG H + LT V +S
Sbjct: 8 LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDV-----WS 62
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LGH + P V+ G +I ++ G H+ +SD+G L+T G G +
Sbjct: 63 WGRGDDGRLGHADNHWKYVPHLVSALTGK--SIKQVTCGSYHTAAISDTGALWTWGGGMY 120
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHG+ H +P +V +F+ + V QIACG RH+ LL G +VY +G + G G+
Sbjct: 121 GKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLA---GGEVYCWGDRENGVCGI 177
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSD 268
+ LP+ L ++I I+A G +AA++ +G L++WG G N +
Sbjct: 178 G-EAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQ 236
Query: 269 VN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
V C + L + Q A G H +T DG+VL GG HG L ++ + T P
Sbjct: 237 VTPCCVEGL-QGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCL-- 293
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V L+G ++Q+ G H+ ++E+ + T+G G+HG+LG G PK+V
Sbjct: 294 ---VKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVE 347
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+WSWG G G+LG G ++++P + V +ACGG H +T G V +
Sbjct: 217 LWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTED-----GDVLT 271
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G GQLGHG+ + P V +G I ++ GW+H+ +S+ G +FT G+G
Sbjct: 272 FGGGEHGQLGHGDKTNRTVPCLVKALEG--AGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G+LGHG + P V S N V ++A H++ L
Sbjct: 330 GKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367
>gi|414880247|tpg|DAA57378.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 227
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 131/224 (58%), Gaps = 17/224 (7%)
Query: 200 NQVYGFGSGKRGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
N VYGFGS +RGQ+G RI +S ++P++ G + +IV I ANGD SAAL GHLY
Sbjct: 2 NSVYGFGSARRGQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYV 61
Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE--- 315
WGR D + P + SLS SQ ALGW+H LVL+ GE+ LG H P
Sbjct: 62 WGRALIGQHDDDQPSEILPSLSVSQVALGWHHALVLSA-GELYTLGVYRHQKCDLPGLGN 120
Query: 316 ---RVSSTRPLSV---------ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ S TR S LE V LDG +V QIA+G EHSA+VT+ + TWGWG
Sbjct: 121 VLGQQSDTRATSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDKGTVFTWGWG 180
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
EHGQLGLG+T D + P+ VN+GD Q V+CGSGFT A+
Sbjct: 181 EHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 224
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+ V F DG + + I++G HS V+D G +FT G G GQLG GD H +P +V+
Sbjct: 145 ETVPFLDGEQ--VAQIASGTEHSALVTDKGTVFTWGWGEHGQLGLGDTSDHVAPQRVN 200
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 184/363 (50%), Gaps = 28/363 (7%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ V+SWG G DGQLG G D+ P ++ + + +ACG H + LT G+V
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEE-----GEV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG G+LGHG+ P+ V G I ++ G H+ V+ SG L+T G G
Sbjct: 56 YTWGRGDDGRLGHGDNGWKFVPRLVEELRGK--NIRQVTCGSYHTAAVTVSGDLYTWGGG 113
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ HS+P V + + V Q+ACG RH++VLL++ VY +G + G
Sbjct: 114 MYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLEN---KDVYTWGDKENGVS 170
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
G D LP L IV ISA G +AALS G ++T+G G S+
Sbjct: 171 G-HGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229
Query: 270 NCPQS-LPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
N P + +L+ Q A G H +T GEV GG HG L ++V+ T P V
Sbjct: 230 NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289
Query: 326 A--LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
LEK+ V+QI G H+ +T+ + TWG G+HG+LG +T PK V+
Sbjct: 290 ESLLEKL-------VLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVD 342
Query: 384 LGD 386
+ D
Sbjct: 343 VLD 345
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 159/336 (47%), Gaps = 32/336 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G + P+L+ ++ + CG H A+T + G ++
Sbjct: 54 EVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVT-----VSGDLY 108
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G+LGHG P V + + ++ G H+ + ++ ++T GD
Sbjct: 109 TWGGGMYGKLGHGNETGHSTPYLVETLKSMQ--VRQVACGSRHTVVLLENKDVYTWGDKE 166
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G GHGD H P V K++ QI ACG H+ L + +V+ FG GK G+
Sbjct: 167 NGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGF-HTAALSE---FGEVFTFGEGKFGR 222
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG + +R + V+ + L + ++ G +AA++ G +YTWG G
Sbjct: 223 LGHNSERNQPVA--RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK 280
Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRP 322
+ P + S L Q GW+H + LT GEV G HG L +D +V+ +P
Sbjct: 281 VNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ V LDG +VI +A+ EH+ + + A++
Sbjct: 341 VDV-------LDGKRVISVASYNEHTVALVDPVAML 369
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 256 LYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+Y+WGRG TSD + P + + Q A G H +VLT +GEV G
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G L + P V L G + Q+ G+ H+A VT + + TWG G +G+
Sbjct: 63 DGRLGHGDNGWKFVP-----RLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGK 117
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
LG GN P +V Q R +V CGS T +
Sbjct: 118 LGHGNETGHSTPYLVETLKSMQVR----QVACGSRHTVVL 153
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 182/359 (50%), Gaps = 24/359 (6%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ V+SWG G DGQLG G D+ P ++ + + +ACG H + LT G+V
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDE-----GEV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG G+LGHG+ P+ V G I ++ G H+ V+ SG L+T G G
Sbjct: 56 YTWGRGDDGRLGHGDNGWKFVPRLVEELRGK--NIRQVTCGSYHTAAVTVSGDLYTWGGG 113
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ HS+P V + V Q+ACG RH++VLL++ VY +G + G
Sbjct: 114 MYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLEN---KDVYTWGDKENGVS 170
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
G D LP L IV ISA G +AALS G ++T+G G S+
Sbjct: 171 G-HGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229
Query: 270 NCPQS-LPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
N P + +L+ Q A G H +T GEV GG HG L ++V+ T P
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVP--- 286
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+V +L V+QI G H+ +T+ + TWG G+HG+LG +T PK+V++
Sbjct: 287 --TRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDV 343
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 156/334 (46%), Gaps = 28/334 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G + P+L+ ++ + CG H A+T + G ++
Sbjct: 54 EVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVT-----VSGDLY 108
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G+LGHG P V G + + ++ G H+ + ++ ++T GD
Sbjct: 109 TWGGGMYGKLGHGNETGHSTPFLVETLKGMQ--VRQVACGSRHTVVLLENKDVYTWGDKE 166
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G GHGD H P V KN+ QI ACG H+ L + +V+ FG GK G+
Sbjct: 167 NGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGF-HTAALSE---FGEVFTFGEGKFGR 222
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG + +R + V+ + L + ++ G +AA++ G +YTWG G
Sbjct: 223 LGHNSERNQPVA--RFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK 280
Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ P + S + Q GW+H + LT GEV G HG L + T P
Sbjct: 281 VNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLP-- 338
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ V L+G +VI +A+ EH+ + + A++
Sbjct: 339 ---KLVDVLEGKRVISVASYNEHTVALVDPVAML 369
>gi|242058889|ref|XP_002458590.1| hypothetical protein SORBIDRAFT_03g036280 [Sorghum bicolor]
gi|241930565|gb|EES03710.1| hypothetical protein SORBIDRAFT_03g036280 [Sorghum bicolor]
Length = 306
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 154/279 (55%), Gaps = 36/279 (12%)
Query: 23 KIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVL 80
+ E E+E WSWGAGTDGQLG G D PQ LL VS +A GGAH +
Sbjct: 10 RWREPEDEAAADWAWSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRGRVSFVAGGGAHAI 69
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
ALTS G+VF+WGRG+ GQLGHG + + +PK V F + H TIT +SAGWNHSGF
Sbjct: 70 ALTSD-----GEVFTWGRGTHGQLGHGNLDNIPHPKLVKFLENH--TITCVSAGWNHSGF 122
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
+DSG LF CGDG+FGQLG GD S + P +V+ F + + ++A GMRHSLVLLK
Sbjct: 123 ATDSGQLFMCGDGSFGQLGTGDNLSRNFPFEVAYFNGRYIEKLAFGMRHSLVLLK---AG 179
Query: 201 QVYGFGSGKR--------GQLGVSKDRIRSVSLPQV---------TIGLHDIE-IVGISA 242
++Y G + G + V + R+ S T+ D E +V I++
Sbjct: 180 ELYTLGVYRHQKCDLPGSGNVLVQQSNTRATSSSHDRSSSLSMLETVPFIDGEHVVQIAS 239
Query: 243 NGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSL 275
+ SA ++ +G ++TWG G TSD PQ +
Sbjct: 240 GTEHSALVTDKGSVFTWGWGEHGQLGLGDTSDHVAPQRV 278
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 146/286 (51%), Gaps = 32/286 (11%)
Query: 148 FTCGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
++ G GT GQLG+G + H P+ + + V +A G H++ L D +V+ +
Sbjct: 24 WSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRGRVSFVAGGGAHAIALTSD---GEVFTW 80
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G G GQLG + ++ P++ L + I +SA + S + G L+ G G F
Sbjct: 81 GRGTHGQLG--HGNLDNIPHPKLVKFLENHTITCVSAGWNHSGFATDSGQLFMCGDGSFG 138
Query: 265 S--TSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE- 315
T D N ++ P +++ + A G H LVL GE+ LG H P
Sbjct: 139 QLGTGD-NLSRNFPFEVAYFNGRYIEKLAFGMRHSLVLLKAGELYTLGVYRHQKCDLPGS 197
Query: 316 -----RVSSTRPLSVA---------LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
+ S+TR S + LE V +DG V+QIA+G EHSA+VT+ ++ TWG
Sbjct: 198 GNVLVQQSNTRATSSSHDRSSSLSMLETVPFIDGEHVVQIASGTEHSALVTDKGSVFTWG 257
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
WGEHGQLGLG+T D + P+ V++GD Q L V+CGSGFT A+
Sbjct: 258 WGEHGQLGLGDTSDHVAPQRVDIGDNGQRMSGSLAVYCGSGFTVAV 303
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 175/357 (49%), Gaps = 24/357 (6%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ V++WG G DGQLG G D+ P L+ ++CG H + LT GKV
Sbjct: 1 MTVYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDD-----GKV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG G+LGHG+ P+ V D + ++ G H+ V+ SG L+T G G
Sbjct: 56 YTWGRGDDGRLGHGDNGWKFVPRLVE--DLRDKKVRQVTCGSYHTAAVTVSGELYTWGGG 113
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ HS+P V S V Q+ACG RH++VLL++ VY +G + G
Sbjct: 114 MYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLEN---QDVYTWGDKENGVS 170
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S P L +I I ISA G +AALS G ++T+G G NS
Sbjct: 171 GHGDTSGHQYS-PYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSER 229
Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ + + + + Q A G H +T G V GG HG L ++V+ P
Sbjct: 230 NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIP--- 286
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V +L +IQ+ G H+ +T+ + TWG G+HG+LG +T PK++
Sbjct: 287 --TRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLI 341
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 156/329 (47%), Gaps = 32/329 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV++WG G DG+LG G + P+L+ V + CG H A+T + G+++
Sbjct: 54 KVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVT-----VSGELY 108
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G+LGHG P V G + ++ G H+ + ++ ++T GD
Sbjct: 109 TWGGGMYGKLGHGNENGHSTPSLVESIKG--LYVRQVACGSRHTVVLLENQDVYTWGDKE 166
Query: 155 FGQLGHGDYRSHS-SPVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G GHGD H SP VS V N+ QI ACG H+ L ++ QV+ FG GK G+
Sbjct: 167 NGVSGHGDTSGHQYSPYCVSELVEINIKQISACGF-HTAALSEN---GQVFTFGEGKFGR 222
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSD 268
LG + +R + V+ + L I ++ G +AA++ GH++TWG G
Sbjct: 223 LGHNSERNQPVA--KCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDK 280
Query: 269 VNCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
VN Q +P+ + + Q GW+H + LT GEV G HG L + T P
Sbjct: 281 VN--QIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEP 338
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ + + +VI +A+ EH+ +
Sbjct: 339 -----KLIETFNSKRVISVASYNEHTVAL 362
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+++G G G+LG ++ + ++ + +ACGG H A+T G VF
Sbjct: 211 QVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTES-----GHVF 265
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG G GQLGHG+ V+ + P V + D + I ++ GW+H+ ++D G +FT G+G
Sbjct: 266 TWGGGEHGQLGHGDKVNQIIPTRVESLIDKN---IIQLTCGWSHTVALTDKGEVFTWGNG 322
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
G+LGH D + P + +F +K V +A H++ L+
Sbjct: 323 DHGKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALV 363
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 27/273 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++T G G GQLG GD P+ V + ++ QI+CG H++VL D +VY +G
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDD---GKVYTWG 59
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
G G+LG + + V P++ L D ++ ++ +AA++ G LYTWG G
Sbjct: 60 RGDDGRLGHGDNGWKFV--PRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGK 117
Query: 264 ------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
N S + +S+ L Q A G H +VL + +V G +G+ +
Sbjct: 118 LGHGNENGHSTPSLVESIKG-LYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGD-- 174
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T + VS L + + QI+A H+A ++EN + T+G G+ G+LG + +Q
Sbjct: 175 --TSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQP 232
Query: 378 HPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 408
K ++ +G + +V CG T A++
Sbjct: 233 VAKCIDALIGKRIK------QVACGGFHTAAVT 259
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 174/358 (48%), Gaps = 28/358 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G DGQLG G D+ P ++ V +ACG H + LT+ G+VF+
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD-----GEVFT 56
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LGHG+ P+ G + ++ G H+ V+ +G L+T G G +
Sbjct: 57 WGRGDDGRLGHGDNGWKYVPRMTQSLAGQ--IVLQVTCGSYHTAAVTGNGDLYTWGGGMY 114
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHGD H++P +V + V V QIACG RH+ ++ +Y +G + G G
Sbjct: 115 GKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTAS---GALYTWGDKENGVAGH 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNC 271
+ LP++ + + ISA G +A ++ G L+TWG G S+ NC
Sbjct: 172 GETEGHQY-LPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNC 230
Query: 272 PQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P+ + + Q + G H V++ DG + GG HG L +RV+ P
Sbjct: 231 HS--PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTF- 287
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V LDG+ V QI G HS +T + TWG G+HG+LG GN P+ V
Sbjct: 288 ----VEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 136/304 (44%), Gaps = 23/304 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
VF+WGRG GQLG G+ D P T+ D R + I+ G H+ ++ G +FT G
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEP---TYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWG 58
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G G+LGHGD P S + V Q+ CG H+ + + +Y +G G G
Sbjct: 59 RGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGN---GDLYTWGGGMYG 115
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS---D 268
+LG + + P+ L + I+ +A ++A G LYTWG N + +
Sbjct: 116 KLGHGDEAGHAT--PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGE 173
Query: 269 VNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
Q LP L +Q + H ++T GE+ G G L + P
Sbjct: 174 TEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSP 233
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + G K Q++ G H+AVV+E+ + T+G GEHGQLG + +++ P V
Sbjct: 234 TIV-----DYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFV 288
Query: 383 NLGD 386
D
Sbjct: 289 EALD 292
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G + P++ + V + CG H A+T G ++
Sbjct: 53 EVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGN-----GDLY 107
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G+LGHG+ PK V G T+ I+ G H+ V+ SG L+T GD
Sbjct: 108 TWGGGMYGKLGHGDEAGHATPKRVEALVG--ATVAQIACGSRHTAIVTASGALYTWGDKE 165
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G GHG+ H P + S K V QI ACG ++V +++ +G GK G+
Sbjct: 166 NGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDA----GELFTWGEGKFGR 221
Query: 213 LG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNS 265
LG +S+ S ++ +G + +S G +A +S +G LYT+G G N
Sbjct: 222 LGHMSERNCHSPTIVDYMVGKKPRQ---VSCGGFHTAVVSEDGRLYTFGGGEHGQLGHND 278
Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ P + + + SQ GW+H + LT G V G HG L
Sbjct: 279 RVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKL 326
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG + SP +++ ++CGG H ++ G+++
Sbjct: 210 ELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSED-----GRLY 264
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G GQLGH + V+ + P V DG ++ I+ GW+HS ++ G ++T G+G
Sbjct: 265 TFGGGEHGQLGHNDRVNKMTPTFVEALDG--MFVSQITCGWSHSVALTVKGLVYTWGNGD 322
Query: 155 FGQLGHGDYRSHSSPVKV 172
G+LGHG+ R + P V
Sbjct: 323 HGKLGHGNGRKVAVPQAV 340
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 256 LYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
++TWGRG TSD + P + + + Q A G H +VLT DGEV G
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G L + P +L G V+Q+ G+ H+A VT N + TWG G +G+
Sbjct: 62 DGRLGHGDNGWKYVP-----RMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGK 116
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
LG G+ PK V E T ++ CGS T ++
Sbjct: 117 LGHGDEAGHATPKRV----EALVGATVAQIACGSRHTAIVT 153
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
A+ TWG GE GQLGLG+T DQ P V D + Q ++ CGSG T ++
Sbjct: 1 AVFTWGRGEDGQLGLGDTSDQDEPTYV---DALRGVGVQ-QIACGSGHTVVLT 49
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 173/356 (48%), Gaps = 24/356 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D P +L + V+ + CG H +A + +++S
Sbjct: 42 VCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM----QLYS 97
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+P+ G + I I+ G +H V+ +G + + G
Sbjct: 98 WGWGDFGRLGHGNSSDVFNPQPIVALQGMK--IKQIACGDSHCLTVTFNGQVHSWGRNQN 155
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G+ + P K+ +F V IA G H+ + + G +YG+G G+ G LG+
Sbjct: 156 GQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE---GGDLYGWGWGRYGNLGL 212
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
S RSV P+ + ++V ++ S ++S+ G LYT+G G D
Sbjct: 213 SDRDDRSV--PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDH 270
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P+ L + + SQ + GW H + + DG++ G + G + + V P+ V
Sbjct: 271 LVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNF 330
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
D K++Q+A G H+ +TEN+ I +WG G GQLG G D+ PK+++
Sbjct: 331 P-----DEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMID 381
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 169/376 (44%), Gaps = 34/376 (9%)
Query: 44 DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
D Q DE P+ + SV +++ G H AL S G V SWGRG GQ
Sbjct: 2 DAQAKAEAAGDEAVPE----APEQSVILISAGANHSAALLS-----GQMVCSWGRGEDGQ 52
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGD 162
LGHG+ D P +T FD R +T + G +H+ + D L++ G G FG+LGHG+
Sbjct: 53 LGHGDSEDRPVPTVLTSFDVPR--VTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGN 110
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
+P + + + QIACG H L + QV+ +G + GQLG+ ++
Sbjct: 111 SSDVFNPQPIVALQGMKIKQIACGDSHCLTV---TFNGQVHSWGRNQNGQLGLGNNQ--D 165
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP 276
LPQ + + I+A + + A++ G LY WG G + D + P+ +
Sbjct: 166 SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS 225
Query: 277 S--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
S A GW H + ++ G + G S +G L + P K+ L
Sbjct: 226 SVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-----RKLEALK 280
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V + QI+ G H+ V E+ + WGW + GQ+G+ + D P VN DE
Sbjct: 281 DVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDE----QKI 336
Query: 395 LEVFCGSGFTYAISRH 410
++V CG T A++ +
Sbjct: 337 VQVACGWRHTLALTEN 352
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 152/336 (45%), Gaps = 26/336 (7%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
+++I A I ++E Q+ +SWG G G+LG G D +PQ + + +A
Sbjct: 76 TSVICGADHTIAYSDDEMQL---YSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA 132
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H L +T G+V SWGR +GQLG G D+L P+ + F+G + I+A
Sbjct: 133 CGDSHCLTVT-----FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEG--VCVKMIAA 185
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ +++ G L+ G G +G LG D S P KVSS + + +ACG RHS+ +
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV 245
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+Y +G K GQLG + +P+ L D+ I IS + A++ +
Sbjct: 246 SSS---GALYTYGWSKYGQLG--HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAED 300
Query: 254 GHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
G LY WG G D P + P Q A GW H L LT + + G
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGR 360
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
G L E + P + +LDG Q+
Sbjct: 361 GASGQLGHGEIIDRNTPKMI---DALSLDGSACKQL 393
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 173/356 (48%), Gaps = 24/356 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D P +L + V+ + CG H +A + +++S
Sbjct: 42 VCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM----QLYS 97
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+P+ G + I I+ G +H V+ +G + + G
Sbjct: 98 WGWGDFGRLGHGNSSDVFNPQPIVALQGMK--IKQIACGDSHCLTVTFNGQVHSWGRNQN 155
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G+ + P K+ +F V IA G H+ + + G +YG+G G+ G LG+
Sbjct: 156 GQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE---GGDLYGWGWGRYGNLGL 212
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
S RSV P+ + ++V ++ S ++S+ G LYT+G G D
Sbjct: 213 SDRDDRSV--PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDH 270
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P+ L + + SQ + GW H + + DG++ G + G + + V P+ V
Sbjct: 271 LVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNF 330
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
D K++Q+A G H+ +TEN+ I +WG G GQLG G D+ PK+++
Sbjct: 331 P-----DEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMID 381
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 169/376 (44%), Gaps = 34/376 (9%)
Query: 44 DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
D Q DE P+ + SV +++ G H AL S G V SWGRG GQ
Sbjct: 2 DAQAKAEAAGDEAVPE----APEQSVILISAGANHSAALLS-----GQMVCSWGRGEDGQ 52
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGD 162
LGHG+ D P +T FD R +T + G +H+ + D L++ G G FG+LGHG+
Sbjct: 53 LGHGDSEDRPVPTVLTSFDVPR--VTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGN 110
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
+P + + + QIACG H L + QV+ +G + GQLG+ ++
Sbjct: 111 SSDVFNPQPIVALQGMKIKQIACGDSHCLTV---TFNGQVHSWGRNQNGQLGLGNNQ--D 165
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP 276
LPQ + + I+A + + A++ G LY WG G + D + P+ +
Sbjct: 166 SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS 225
Query: 277 S--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
S A GW H + ++ G + G S +G L + P K+ L
Sbjct: 226 SVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-----RKLEALK 280
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V + QI+ G H+ V E+ + WGW + GQ+G+ + D P VN DE
Sbjct: 281 DVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDE----QKI 336
Query: 395 LEVFCGSGFTYAISRH 410
++V CG T A++ +
Sbjct: 337 VQVACGWRHTLALTEN 352
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 152/336 (45%), Gaps = 26/336 (7%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
+++I A I ++E Q+ +SWG G G+LG G D +PQ + + +A
Sbjct: 76 TSVICGADHTIAYSDDEMQL---YSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA 132
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H L +T G+V SWGR +GQLG G D+L P+ + F+G + I+A
Sbjct: 133 CGDSHCLTVT-----FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEG--VCVKMIAA 185
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ +++ G L+ G G +G LG D S P KVSS + + +ACG RHS+ +
Sbjct: 186 GAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV 245
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+Y +G K GQLG + +P+ L D+ I IS + A++ +
Sbjct: 246 SSS---GALYTYGWSKYGQLG--HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAED 300
Query: 254 GHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
G LY WG G D P + P Q A GW H L LT + + G
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGR 360
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
G L E + P + +LDG Q+
Sbjct: 361 GASGQLGHGEIIDRNTPKMI---DALSLDGSACKQL 393
>gi|297597721|ref|NP_001044425.2| Os01g0777800 [Oryza sativa Japonica Group]
gi|255673744|dbj|BAF06339.2| Os01g0777800 [Oryza sativa Japonica Group]
Length = 180
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 111/164 (67%), Gaps = 9/164 (5%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGG 91
V WSWGAGTDGQLG G D PQ L L VS +A GGAH +ALTS G
Sbjct: 15 VWAWSWGAGTDGQLGNGGFQDHHLPQPLLLPPRCRGLVSFVAGGGAHAIALTSD-----G 69
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF+WGRG+ GQLGHG++ + +PK V FF+ Y IT +SAGWNHSGF +DSG LF CG
Sbjct: 70 EVFTWGRGTHGQLGHGDVENIPHPKLVKFFE--NYMITCVSAGWNHSGFATDSGQLFMCG 127
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
DG+FGQLG GD + P +V+ F K+V ++A GMRHSLVLLK
Sbjct: 128 DGSFGQLGAGDNHPRNLPFEVAYFTTKHVVRLALGMRHSLVLLK 171
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNST---SDV-NCPQSLPSSLSFSQAAL------GWN 289
++ G + AL+++G ++TWGRG + DV N P P + F + + GWN
Sbjct: 55 VAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPH--PKLVKFFENYMITCVSAGWN 112
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H T G++ M G G L + P VA + V+++A G HS
Sbjct: 113 HSGFATDSGQLFMCGDGSFGQLGAGDNHPRNLPFEVAYFTTKH-----VVRLALGMRHSL 167
Query: 350 VVTE 353
V+ +
Sbjct: 168 VLLK 171
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
+A G H+ +T + + TWG G HGQLG G+ + HPK+V + +
Sbjct: 55 VAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPHPKLVKFFENY 102
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
S A G H + LT DGEV G HG L + + P + V + + +
Sbjct: 53 SFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGDVENIPHP-----KLVKFFENYMITCV 107
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
+AG HS T++ + G G GQLG G+ HP+
Sbjct: 108 SAGWNHSGFATDSGQLFMCGDGSFGQLGAGDN----HPR 142
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 25/357 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV-SMLACGGAHVLALTSPSSVIGGKVF 94
V SWG G DGQLG G D P LL+ + + S++ CG H A + +++
Sbjct: 41 VCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQM----QLY 96
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG G G+LGHG D +P+P+ G + I I+ G +H V+D+G + + G
Sbjct: 97 SWGWGDFGRLGHGNSSDVFHPQPIEALQGIK--IKQIACGDSHCLAVTDAGQVHSWGRNQ 154
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ P K+ +F V IA G H+ +L+D +YG+G G+ G LG
Sbjct: 155 NGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILED---GDLYGWGWGQYGNLG 211
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
+ R V P+ + ++V ++ + +S+ G LYT+G G D
Sbjct: 212 LGDRNDRLV--PEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFED 269
Query: 269 VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + SQ A GW H + + GDG++ G + G + + V P+ V
Sbjct: 270 HLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVI 329
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
D KV Q+A G H+ +TEN+ + +WG G GQLG G D+ PK+++
Sbjct: 330 FP-----DEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMID 381
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 150/340 (44%), Gaps = 31/340 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++SWG G G+LG G D PQ + + +ACG +H LA+T G+V
Sbjct: 93 MQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTD-----AGQV 147
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G D+L P+ + F+G + I+AG H+ + + G L+ G G
Sbjct: 148 HSWGRNQNGQLGLGNTEDSLLPQKIHAFEG--VCVKMIAAGAEHTAAILEDGDLYGWGWG 205
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD P KVSS + + +ACG RH++ + +Y +G K GQL
Sbjct: 206 QYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSS---GDLYTYGWSKYGQL 262
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G +P L D I I+ + A++ +G LY WG G
Sbjct: 263 G--HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNV 320
Query: 268 DVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP--- 322
D P + P +Q A GW H L LT + V G G L E + P
Sbjct: 321 DHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMI 380
Query: 323 --LSVALEKVSNLDGVKV------IQIAAGAEHSAVVTEN 354
LS+ NL+ K ++I A ++ V EN
Sbjct: 381 DALSLDGYACKNLESSKAVPMIAEVRITPSARYALVPDEN 420
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 153/351 (43%), Gaps = 27/351 (7%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V++++ G H +AL S +V SWGRG GQLGHG+ D P ++ FD
Sbjct: 21 TVALVSAGANHSVALLSSKAVC-----SWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIA 75
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
I + + + + L++ G G FG+LGHG+ P + + + QIACG
Sbjct: 76 SVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGD 135
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + QV+ +G + GQLG+ LPQ + + I+A + +
Sbjct: 136 SHCLAVTD---AGQVHSWGRNQNGQLGLGN--TEDSLLPQKIHAFEGVCVKMIAAGAEHT 190
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
AA+ +G LY WG G +D P+ + S A GW H + ++ G+
Sbjct: 191 AAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGD 250
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P K+ L + QIA G H+ V + +
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDRFISQIAGGWRHTMAVAGDGKLYG 305
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
WGW + GQ+G+ + D P V DE +V CG T A++ +
Sbjct: 306 WGWNKFGQVGVADNVDHCSPVQVIFPDE----QKVAQVACGWRHTLALTEN 352
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+V + V ++ G HS+ LL V +G G+ GQLG R V P +
Sbjct: 13 EVPEAPEQTVALVSAGANHSVALLSS---KAVCSWGRGEDGQLGHGDAEDRPV--PTLLS 67
Query: 231 GLHDIEIVGISANG-DRSAALSAEG-HLYTWG------RGFNSTSDVNCPQSLPS--SLS 280
G I + G D + A S E LY+WG G ++SDV PQ + + +
Sbjct: 68 GFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIK 127
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
Q A G +H L +T G+V G + +G L S P +K+ +GV V
Sbjct: 128 IKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLP-----QKIHAFEGVCVKM 182
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
IAAGAEH+A + E+ + WGWG++G LGLG+ D++ P+ V+
Sbjct: 183 IAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVS 225
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
E+V V ++AGA HS + ++A+ +WG GE GQLG G+ D+ P +++
Sbjct: 12 EEVPEAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLS---G 68
Query: 388 FQNRDTQLEVFCGSGFTYAIS 408
F V CG+ T A S
Sbjct: 69 FDVPGIASVVICGADHTTAYS 89
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 173/362 (47%), Gaps = 34/362 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG GQLG G +P + L + ++++ LA GG+H LALT G V
Sbjct: 58 TVLAWGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTD-----TGVVL 112
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G D P V G TIT ++AG HS ++D+G + G +
Sbjct: 113 AWGSNSRGQLGDGTTTDRSTPVTVGLPAG--TTITALAAGRRHSLALTDTGAVLAWGSNS 170
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + S+PV V + +A +SL L +GS RGQLG
Sbjct: 171 NGQLGDGTTTARSTPVTVGLPAGTTITALAAST-YSLALTDT---GAALAWGSNSRGQLG 226
Query: 215 --VSKDRIR--SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
+ DR +VSLP T I ++A+ D S AL+ G + WG N
Sbjct: 227 DGTTTDRSTPVTVSLPAGT------TITALAASYDHSLALTDTGAVLAWGSNSNGQLGDG 280
Query: 265 STSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+T++ + P + LP+ + + A G +H LVLT G VL G + +G L D + P
Sbjct: 281 TTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++V L G + +AAG HS +T+ A++ WG +GQLG G T D+ P V
Sbjct: 341 VTVGLPA-----GTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTDRSTPVTV 395
Query: 383 NL 384
L
Sbjct: 396 GL 397
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG+ ++GQLG G + +P + L + ++++ LA G +H L LTS G V
Sbjct: 265 AVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTS-----AGAVL 319
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S+GQLG G D P V G TIT ++AG+ HS ++D+G + G +
Sbjct: 320 AWGSNSNGQLGDGTTTDRSTPVTVGLPAG--TTITALAAGYYHSLALTDTGAVLAWGGNS 377
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+GQLG G S+PV V + + H + L+
Sbjct: 378 YGQLGDGTTTDRSTPVTVGLPAGTTITVLVSMDNHGMALVA 418
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 170/355 (47%), Gaps = 24/355 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D L P L+ + +ACG H LA + + +++S
Sbjct: 34 VCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRN----ELYS 89
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D L P+P+ G R I I+ G +H V+ G + + G
Sbjct: 90 WGWGDFGRLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 147
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F + +A G HS+ + ++ ++YG+G G+ G LG+
Sbjct: 148 GQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 204
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R + P+ + ++V ++ + ++S+ G LYT+G G + D
Sbjct: 205 GDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDS 262
Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
PQ L S SQ + GW H + LT G + G + G + + V P+ V
Sbjct: 263 LVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF 322
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV+QI+ G H+ VTE + +WG G +GQLG G+T D+ PK++
Sbjct: 323 PHDQ-----KVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 165/354 (46%), Gaps = 34/354 (9%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
S V +++ G +H +AL S G V SWGRG GQLGHG+ D L P ++ D +
Sbjct: 13 SRVLLISAGASHTVALLS-----GNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQ- 66
Query: 127 TITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I I+ G +H+ S+S L++ G G FG+LGHG+ P + + + QIAC
Sbjct: 67 -IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIAC 125
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G H L + + +V +G + GQLG+ S+D + +PQ + I ++A
Sbjct: 126 GDSHCLAV---TMEGEVQSWGRNQNGQLGLGTSEDSL----VPQKIQTFQGVPIKMVAAG 178
Query: 244 GDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLT 295
+ S A++ G LY WG G +D P+ + S A GW H + ++
Sbjct: 179 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVS 238
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G + G S +G L S P +K+ L + Q++ G HS +T
Sbjct: 239 SLGGLYTYGWSKYGQLGHGNFEDSLVP-----QKLQALSDKLISQVSGGWRHSMALTSTG 293
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+G+ D+ P V +F + +++ CG T A++
Sbjct: 294 LLYGWGWNKFGQVGVGDNVDRCSPVQV----KFPHDQKVVQISCGWRHTIAVTE 343
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 18/245 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H +A+T G+++
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE-----NGELY 192
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D P+ V+ D + + ++ GW H+ VS G L+T G
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVM--VACGWRHTISVSSLGGLYTYGWSK 250
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHG++ P K+ + +K + Q++ G RHS+ L L +YG+G K GQ+G
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGL---LYGWGWNKFGQVG 307
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V D + S QV HD ++V IS + A++ + ++++WGRG N T D
Sbjct: 308 VG-DNVDRCSPVQVKF-PHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVD 365
Query: 269 VNCPQ 273
N P+
Sbjct: 366 RNSPK 370
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 143/299 (47%), Gaps = 26/299 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG G G+LG G D L PQ ++ L L + +ACG +H LA+T + G+V
Sbjct: 86 ELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLR-IKQIACGDSHCLAVT-----MEGEV 139
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G D+L P+ + F G I ++AG HS ++++G L+ G G
Sbjct: 140 QSWGRNQNGQLGLGTSEDSLVPQKIQTFQG--VPIKMVAAGAEHSVAITENGELYGWGWG 197
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD P KVSS + +ACG RH++ + LG +Y +G K GQL
Sbjct: 198 RYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQL 254
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV---- 269
G +PQ L D I +S S AL++ G LY W G+N V
Sbjct: 255 G--HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGW--GWNKFGQVGVGD 310
Query: 270 NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N + P + F Q + GW H + +T V G +G L + V P
Sbjct: 311 NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 170/355 (47%), Gaps = 24/355 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D L P L+ + +ACG H LA + + +++S
Sbjct: 34 VCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRN----ELYS 89
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D L P+P+ G R I I+ G +H V+ G + + G
Sbjct: 90 WGWGDFGRLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 147
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F + +A G HS+ + ++ ++YG+G G+ G LG+
Sbjct: 148 GQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 204
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R + P+ + ++V ++ + ++S+ G LYT+G G + D
Sbjct: 205 GDRNDRWI--PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDS 262
Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
PQ L S SQ + GW H + LT G + G + G + + V P+ V
Sbjct: 263 LVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF 322
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV+QI+ G H+ VTE + +WG G +GQLG G+T D+ PK++
Sbjct: 323 PHDQ-----KVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 165/354 (46%), Gaps = 34/354 (9%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
S V +++ G +H +AL S G V SWGRG GQLGHG+ D L P ++ D +
Sbjct: 13 SRVLLISAGASHTVALLS-----GNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQ- 66
Query: 127 TITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I I+ G +H+ S+S L++ G G FG+LGHG+ P + + + QIAC
Sbjct: 67 -IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIAC 125
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G H L + + +V +G + GQLG+ S+D + +PQ + I ++A
Sbjct: 126 GDSHCLAV---TMEGEVQSWGRNQNGQLGLGTSEDSL----VPQKIQTFQGVPIKMVAAG 178
Query: 244 GDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLT 295
+ S A++ G LY WG G +D P+ + S A GW H + ++
Sbjct: 179 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVS 238
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G + G S +G L S P +K+ L + Q++ G HS +T
Sbjct: 239 SLGGLYTYGWSKYGQLGHGNFEDSLVP-----QKLQALSDKLISQVSGGWRHSMALTSTG 293
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+G+ D+ P V +F + +++ CG T A++
Sbjct: 294 LLYGWGWNKFGQVGVGDNVDRCSPVQV----KFPHDQKVVQISCGWRHTIAVTE 343
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 127/245 (51%), Gaps = 18/245 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H +A+T G+++
Sbjct: 138 EVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE-----NGELY 192
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D P+ V+ D + + ++ GW H+ VS G L+T G
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVM--VACGWRHTISVSSLGGLYTYGWSK 250
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHG++ P K+ + +K + Q++ G RHS+ L L +YG+G K GQ+G
Sbjct: 251 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGL---LYGWGWNKFGQVG 307
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V D + S QV HD ++V IS + A++ + ++++WGRG N T D
Sbjct: 308 VG-DNVDRCSPVQVKF-PHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVD 365
Query: 269 VNCPQ 273
N P+
Sbjct: 366 RNSPK 370
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 143/299 (47%), Gaps = 26/299 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG G G+LG G D L PQ ++ L L + +ACG +H LA+T + G+V
Sbjct: 86 ELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLR-IKQIACGDSHCLAVT-----MEGEV 139
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G D+L P+ + F G I ++AG HS ++++G L+ G G
Sbjct: 140 QSWGRNQNGQLGLGTSEDSLVPQKIQTFQG--VPIKMVAAGAEHSVAITENGELYGWGWG 197
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD P KVSS + +ACG RH++ + LG +Y +G K GQL
Sbjct: 198 RYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQL 254
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV---- 269
G +PQ L D I +S S AL++ G LY W G+N V
Sbjct: 255 G--HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGW--GWNKFGQVGVGD 310
Query: 270 NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N + P + F Q + GW H + +T V G +G L + V P
Sbjct: 311 NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSP 369
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 160/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D LSP L+ + + CG H +A + +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRM----EVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 207 GDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266
Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + + SQ + GW H + LT DG++ G + G + + P+ V +
Sbjct: 267 PHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIP- 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKII 374
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 177/368 (48%), Gaps = 40/368 (10%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
DE++P V +++ G +H +AL S G V SWGRG GQLGHG+ D L
Sbjct: 8 DEVTP------PPRRVLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRL 56
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKV 172
P ++ D H+ I ++ G +H+ S+S +++ G G FG+LGHG+ +P+ +
Sbjct: 57 SPTQLSALDDHQ--IVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPI 114
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTI 230
+ + QIACG H L + + +V +G + GQLG+ ++D + +PQ
Sbjct: 115 KALHGIRIKQIACGDSHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQ 167
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFS 282
I I ++A + +AA++ +G LY WG G +D P+ + S+ S
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS 227
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
A GW H + ++ G + G S +G L + P K+ L + QI+
Sbjct: 228 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVP-----HKLEALGNSVISQIS 282
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G H+ +T + + WGW + GQ+G+GN DQ P V + D+ + ++V CG
Sbjct: 283 GGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQK----VVQVSCGWR 338
Query: 403 FTYAISRH 410
T A++
Sbjct: 339 HTLAVTER 346
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 12/230 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 253 YGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV I D ++V +S + A++ +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRI-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 140/297 (47%), Gaps = 20/297 (6%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++V+SWG G G+LG G D +P + + +ACG +H LA+T + G+V
Sbjct: 87 MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----MEGEV 141
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+ G G
Sbjct: 142 QSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGWGWG 199
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD P +V+S + + +ACG RH++ + +Y +G K GQL
Sbjct: 200 RYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV---SYSGALYTYGWSKYGQL 256
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G + +P L + I IS + AL+++G LY WG G +
Sbjct: 257 G--HGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 268 DVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
D P +P Q + GW H L +T V G +G L E + P
Sbjct: 315 DQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFP 371
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 169/357 (47%), Gaps = 24/357 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D LSP L+ V + CG H A + + +V+S
Sbjct: 37 VCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFT----QVYS 92
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+P+ G R I I+ G +H V+ G + + G
Sbjct: 93 WGWGDFGRLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQN 150
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F +V +A G H+ + +D ++YG+G G+ G LG+
Sbjct: 151 GQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED---GELYGWGWGRYGNLGL 207
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R V P+ + +++V ++ + ++S+ G LYT+G G D
Sbjct: 208 GDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDH 265
Query: 270 NCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + S+ + GW H + LT DG++ G + G + + V P+ V
Sbjct: 266 LTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 325
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
KV+ I+ G H+ VTE + + +WG G +GQLG G + D+ PK++ +
Sbjct: 326 PHEQ-----KVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEV 377
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 34/357 (9%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
+ + V +++ G +H +AL S G V SWGRG GQLGHG+ D L P ++ DG
Sbjct: 13 APVRRVLLISAGASHSVALLS-----GNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDG 67
Query: 124 HRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
H + ++ G +H+ S+S +++ G G FG+LGHG+ +P + + + Q
Sbjct: 68 HE--VVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQ 125
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
IACG H L + D +V +G + GQLG+ ++D + +PQ + + +
Sbjct: 126 IACGDSHCLAVTMD---GEVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFQGVSVKMV 178
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
+A + +AA++ +G LY WG G +D P+ + + + + A GW H +
Sbjct: 179 AAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTI 238
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ G + G S +G L + P K+ L + +I+ G H+ +T
Sbjct: 239 SVSSSGGLYTYGWSKYGQLGHGDFEDHLTP-----HKLEALQENLISEISGGWRHTMALT 293
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ + WGW + GQ+G+G+ D P V +F + + + CG T A++
Sbjct: 294 SDGKLYGWGWNKFGQVGVGDNVDHCSPVQV----KFPHEQKVVHISCGWRHTLAVTE 346
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 18/247 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + SV M+A G H A+T G+++
Sbjct: 141 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED-----GELY 195
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ V+ +G + + ++ GW H+ VS SG L+T G
Sbjct: 196 GWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK--MVKVACGWRHTISVSSSGGLYTYGWSK 253
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H +P K+ + + +I+ G RH++ L D ++YG+G K GQ+G
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSD---GKLYGWGWNKFGQVG 310
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V D + S QV H+ ++V IS + A++ ++++WGRG N + D
Sbjct: 311 VG-DNVDHCSPVQVKF-PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 368
Query: 269 VNCPQSL 275
N P+ +
Sbjct: 369 RNIPKMI 375
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 139/307 (45%), Gaps = 24/307 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+ +V+SWG G G+LG G D +PQ + + +ACG +H LA+T +
Sbjct: 85 ESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVT-----MD 139
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G D+L P+ + F G ++ ++AG H+ V++ G L+
Sbjct: 140 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQG--VSVKMVAAGAEHTAAVTEDGELYGW 197
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P KVS+ + ++ACG RH++ + +Y +G K
Sbjct: 198 GWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSS---GGLYTYGWSKY 254
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG P L + I IS + AL+++G LY W G+N V
Sbjct: 255 GQLG--HGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGW--GWNKFGQVG 310
Query: 270 ---NCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N P + F + GW H L +T V G +G L E +
Sbjct: 311 VGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRN 370
Query: 321 RPLSVAL 327
P + +
Sbjct: 371 IPKMIEV 377
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 207 GDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 34/354 (9%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+
Sbjct: 16 TVLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ-- 68
Query: 128 ITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
I ++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H L + + +V +G + GQLG+ ++D + +PQ I I ++A
Sbjct: 129 DSHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGA 181
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTG 296
+ +AA++ +G LY WG G +D P+ + S+ S A GW H + ++
Sbjct: 182 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSY 241
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G S +G L + P K+ L + QI+ G H+ +T +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTER 346
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 157/347 (45%), Gaps = 34/347 (9%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 84 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 196
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 321 RPLSVALEKV----------SNLDGVKVIQIAAGAEHSAVVTENRAI 357
P + V SN+D + AE AVV + +
Sbjct: 370 FPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDETGL 416
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 37 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 92
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 93 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 150
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 151 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 207
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 208 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 267
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 268 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 326
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 327 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 375
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 170/352 (48%), Gaps = 34/352 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 18 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 70
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 71 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 130
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + + +V +G + GQLG+ ++D + +PQ I I ++A +
Sbjct: 131 SHCLAVTME---GEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGAE 183
Query: 246 RSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGD 297
+AA++ +G LY WG G +D P+ + S+ S A GW H + ++
Sbjct: 184 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 243
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G S +G L + P K+ L + QI+ G H+ +T + +
Sbjct: 244 GALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALTSDGKL 298
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 299 YGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTE 346
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 195
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 196 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 253
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 254 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 310
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV D ++V +S + A++ +++ WGRG N
Sbjct: 311 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 85 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 139
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 140 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 197
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 254
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 255 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 310
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 311 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 370
Query: 321 RP 322
P
Sbjct: 371 FP 372
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ V I+ G HS+ LL G+ V +G G+ GQLG R P L +I
Sbjct: 16 RKVLIISAGASHSVALLS---GDIVCSWGRGEDGQLGHGDAEDRPS--PTQLSALDGHQI 70
Query: 238 VGISANGDRSAALSAEG-HLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGW 288
V ++ D + A S G +Y+WG G ++SD+ P + + + Q A G
Sbjct: 71 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 130
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L +T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+
Sbjct: 131 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHT 185
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGS 401
A VTE+ + WGWG +G LGLG+ D++ P +V + G E + R T + G+
Sbjct: 186 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245
Query: 402 GFTYAISRH 410
+TY S++
Sbjct: 246 LYTYGWSKY 254
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 34/353 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 17 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 69
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + + +V +G + GQLG+ ++D + +PQ I I ++A +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGAE 182
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGD 297
+AA++ +G LY WG G +D P+ + S+ S A GW H + ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G S +G L + P K+ L + QI+ G H+ +T + +
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALTSDGKL 297
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTER 346
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV D ++V +S + A++ +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 157/347 (45%), Gaps = 34/347 (9%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 84 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 196
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 321 RPLSVALEKV----------SNLDGVKVIQIAAGAEHSAVVTENRAI 357
P + V SN+D + AE AVV + +
Sbjct: 370 FPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDETGL 416
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 73/243 (30%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS------------ 277
+++ ISA S AL + + +WGRG + D P L +
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 278 ---SLSFSQAAL-----GW-----------------------------------NHVLVL 294
++++SQ+ + GW +H L +
Sbjct: 76 ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAV 135
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+A VTE+
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHTAAVTED 190
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGSGFTYAI 407
+ WGWG +G LGLG+ D++ P +V + G E + R T + G+ +TY
Sbjct: 191 GDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 250
Query: 408 SRH 410
S++
Sbjct: 251 SKY 253
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 170/355 (47%), Gaps = 24/355 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D LSP L+ + + CG H T+ SV +V+S
Sbjct: 29 VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADH----TTAYSVARTEVYS 84
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D L PKP+ H I I+ G +H V+ G + + G
Sbjct: 85 WGWGDFGRLGHGNSSDLLTPKPIKAL--HGLKIRQIACGDSHCLAVTMEGEVQSWGRNQN 142
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F ++ +A G H+ + +D +++G+G G+ G LG+
Sbjct: 143 GQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTED---GELFGWGWGRYGNLGL 199
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R V PQ + ++V ++ + ++S+ G LYT+G G D
Sbjct: 200 GDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDR 257
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + + SQ + GW H + LT DG++ G + G + + + P+ +
Sbjct: 258 LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKF 317
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ KVIQI+ G H+ VT+ + + +WG G +GQLG G + D+ P ++
Sbjct: 318 PQDQ-----KVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 367
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 166/356 (46%), Gaps = 34/356 (9%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
S + V ++ G +H +AL S G V SWGRG GQLGHG+ D L P ++ DG
Sbjct: 5 SPVRRVLFISAGASHSVALLS-----GNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDG 59
Query: 124 HRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
H I ++ G +H+ S + +++ G G FG+LGHG+ +P + + + Q
Sbjct: 60 HE--IVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQ 117
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
IACG H L + + +V +G + GQLG+ ++D + +PQ I I +
Sbjct: 118 IACGDSHCLAV---TMEGEVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFEGISIKMV 170
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
+A + +AA++ +G L+ WG G +D PQ + S A GW H +
Sbjct: 171 AAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTI 230
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ G + G S +G L + P ++ L G + QI+ G H+ +T
Sbjct: 231 SVSSLGGLYTYGWSKYGQLGHGDFEDRLVP-----HRLEALRGDNISQISGGWRHTMALT 285
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ + WGW + GQ+G G+ D P + +F +++ CG T A++
Sbjct: 286 TDGKLYGWGWNKFGQVGAGDNIDHCSPIQI----KFPQDQKVIQISCGWRHTLAVT 337
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 154/322 (47%), Gaps = 31/322 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G D L+P+ + + +ACG +H LA+T + G+V
Sbjct: 80 TEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVT-----MEGEV 134
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G D+L P+ + F+G +I ++AG H+ V++ G LF G G
Sbjct: 135 QSWGRNQNGQLGLGTTEDSLVPQKIQAFEG--ISIKMVAAGAEHTAAVTEDGELFGWGWG 192
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD P KVSS + +ACG RH++ + LG +Y +G K GQL
Sbjct: 193 RYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQL 249
Query: 214 GVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV-- 269
G +DR+ +P L I IS + AL+ +G LY W G+N V
Sbjct: 250 GHGDFEDRL----VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGW--GWNKFGQVGA 303
Query: 270 --NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N P + F Q + GW H L +T V G +G L E V
Sbjct: 304 GDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNT 363
Query: 322 PLSVALEKVSNLDGVKVIQIAA 343
P+ LE +S +DG QI +
Sbjct: 364 PM--ILEALS-VDGCSGQQIES 382
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 168/355 (47%), Gaps = 25/355 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D L P L+ + + CG H LA S S V +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAY-SESKV---EVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F + +A G HS+ + ++ ++YG+G G+ G LG+
Sbjct: 150 GQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R + P+ + + ++V ++ + ++S+ G LYT+G G D
Sbjct: 207 GDRNDRCI--PE-KVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDH 263
Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S Q + GW H + LT G++ G + G + + V P+ V
Sbjct: 264 LVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKF 323
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV QI+ G H+ VTE + +WG G +GQLG+G+T D +PK++
Sbjct: 324 PHDQ-----KVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKII 373
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 130/245 (53%), Gaps = 19/245 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H +A+T G+++
Sbjct: 140 EVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE-----NGELY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D P+ V+ D + + ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRNDRCIPEKVSV-DCDKMVL--VACGWRHTISVSSSGELYTYGWSK 251
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD + H P K+ +F +K + Q++ G RH++ L G Q+YG+G K GQ+G
Sbjct: 252 YGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTT---GGQLYGWGWNKFGQVG 308
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V D + S QV HD ++ IS + A++ + ++Y+WGRG N T D
Sbjct: 309 VG-DNVDRCSPVQVKF-PHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTID 366
Query: 269 VNCPQ 273
N P+
Sbjct: 367 WNYPK 371
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 161/351 (45%), Gaps = 33/351 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ GG+H +AL S G V SWGRG GQLGHG+ D L P ++ D + I
Sbjct: 17 VLLISAGGSHSVALIS-----GNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQ--I 69
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ G +H+ S+S +++ G G FG+LGHG+ P + + + QIACG
Sbjct: 70 VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGD 129
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + + +V +G + GQLG+ ++D + +PQ + I ++A +
Sbjct: 130 SHCLAVTME---GEVQSWGRNQNGQLGLGTTEDSL----VPQKIQTFQGVPIKMVAAGAE 182
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSL-SFSQAALGWNHVLVLTGDG 298
S A++ G LY WG G +D P+ + A GW H + ++ G
Sbjct: 183 HSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSG 242
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
E+ G S +G L + P K+ + Q++ G H+ +T +
Sbjct: 243 ELYTYGWSKYGQLGHGDCKDHLVP-----HKLQAFSDKLICQVSGGWRHTMALTTGGQLY 297
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G+G+ D+ P V +F + ++ CG T A++
Sbjct: 298 GWGWNKFGQVGVGDNVDRCSPVQV----KFPHDQKVAQISCGWRHTIAVTE 344
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 28/242 (11%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
+ V I+ G HS+ L+ GN V +G G+ GQLG + DR+ LP L
Sbjct: 15 RRVLLISAGGSHSVALIS---GNVVCSWGRGEDGQLGHGDTDDRL----LPTQLSALDAQ 67
Query: 236 EIVGISANGDRSAALS-AEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAAL 286
+IV + D + A S ++ +Y+WG G ++SD+ PQ + + L Q A
Sbjct: 68 QIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIAC 127
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H L +T +GEV G + +G L T S+ +K+ GV + +AAGAE
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLG-----LGTTEDSLVPQKIQTFQGVPIKMVAAGAE 182
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HS +TEN + WGWG +G LGLG+ D+ P+ V++ + D + V CG T +
Sbjct: 183 HSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV-----DCDKMVLVACGWRHTIS 237
Query: 407 IS 408
+S
Sbjct: 238 VS 239
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 25 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 80
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 81 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 138
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 139 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 195
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 196 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 256 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 315 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 30/350 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 6 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 58
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 59 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 118
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + + +V +G + GQLG+ V PQ I I ++A + +
Sbjct: 119 SHCLAVTME---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHT 173
Query: 248 AALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
AA++ +G LY WG G +D P+ + S+ S A GW H + ++ G
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P K+ L + QI+ G H+ +T + +
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALTSDGKLYG 288
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 289 WGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTE 334
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 18/245 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 183
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 184 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 241
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 298
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V + + S QV D ++V +S + A++ +++ WGRG N + D
Sbjct: 299 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 356
Query: 269 VNCPQ 273
N P+
Sbjct: 357 RNFPK 361
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 73 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 127
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 128 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 185
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 242
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 243 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 298
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 299 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 358
Query: 321 RP 322
P
Sbjct: 359 FP 360
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ V I+ G HS+ LL G+ V +G G+ GQLG R P L +I
Sbjct: 4 RKVLIISAGASHSVALLS---GDIVCSWGRGEDGQLGHGDAEDRPS--PTQLSALDGHQI 58
Query: 238 VGISANGDRSAALSAEG-HLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGW 288
V ++ D + A S G +Y+WG G ++SD+ P + + + Q A G
Sbjct: 59 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 118
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L +T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+
Sbjct: 119 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHT 173
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGS 401
A VTE+ + WGWG +G LGLG+ D++ P +V + G E + R T + G+
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 402 GFTYAISRH 410
+TY S++
Sbjct: 234 LYTYGWSKY 242
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 34/353 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 17 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 69
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + + +V +G + GQLG+ ++D + +PQ I I ++A +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIPIKMVAAGAE 182
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGD 297
+AA++ +G LY WG G +D P+ + S+ S A GW H + ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G S +G L + P K+ L + QI+ G H+ +T + +
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALTSDGKL 297
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTER 346
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTED-----GDLY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV D ++V +S + A++ +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 156/347 (44%), Gaps = 34/347 (9%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 84 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G I ++AG H+ V++ G L+
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEG--IPIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 321 RPLSVALEKV----------SNLDGVKVIQIAAGAEHSAVVTENRAI 357
P + V SN+D + AE AVV + +
Sbjct: 370 FPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDETGL 416
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 73/243 (30%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS------------ 277
+++ ISA S AL + + +WGRG + D P L +
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 278 ---SLSFSQAAL-----GW-----------------------------------NHVLVL 294
++++SQ+ + GW +H L +
Sbjct: 76 ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAV 135
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +GEV G + +G L + S P +K+ +G+ + +AAGAEH+A VTE+
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIPIKMVAAGAEHTAAVTED 190
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGSGFTYAI 407
+ WGWG +G LGLG+ D++ P +V + G E + R T + G+ +TY
Sbjct: 191 GDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 250
Query: 408 SRH 410
S++
Sbjct: 251 SKY 253
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 162/324 (50%), Gaps = 26/324 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
KV++ G G+ G+LG G + P ++ S+ V +A C G HVLA+T+ GK
Sbjct: 2978 KVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTA-----DGK 3032
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G GQLGHG + PK + F I +S G HS VS +G LFT G
Sbjct: 3033 VFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKH--IREVSCGTGHSAAVSVNGELFTWGQ 3090
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD + + P V + + +ACG R++ L N ++ +G G G+
Sbjct: 3091 GADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAG--DNSLWAWGDGSFGK 3148
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--FNSTSDVN 270
LG+ KD S +P I I+ I S L+ EG +YTWG+G + +D
Sbjct: 3149 LGL-KDGSSSTDVPVQVITFPS-NIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDST 3206
Query: 271 CPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
Q +P+ S + +Q A+G H L LT GEV G + HG + + + +P
Sbjct: 3207 SVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKP-- 3264
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
+ V++L G ++ +IA G+ HS
Sbjct: 3265 ---QIVASLKGHRICKIACGSSHS 3285
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 15/270 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+SWG G++G LG G + +P + S + ++ G H A+T G ++
Sbjct: 528 KVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE-----DGVLY 582
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+GS G+LGHG D L P V +G + +G H+ + D+G +++ GDG
Sbjct: 583 TWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGD 642
Query: 155 FGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG + P +S V +I CG + S+ L KD ++Y +G G QL
Sbjct: 643 YGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKD---GKLYSWGCGDTYQL 699
Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
G +++ +R P++ GL + + +S AL+ + +Y WG+ NS+ +VN
Sbjct: 700 GHGNQEHVRQ---PKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGK--NSSFEVNES 754
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
+ SS +AA G +L+ G E +
Sbjct: 755 GDIISSPLMIEAASGKGALLIACGASETFV 784
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 23/357 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+ WG QLGT ++ + + + + GG+ + S GKVF
Sbjct: 2925 KVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDD----GKVF 2980
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G GSSG+LG G + P ++ + +S H V+ G +F+ GDG
Sbjct: 2981 ACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQ 3040
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHG +S+ P + F K++ +++CG HS + + +++ +G G G+LG
Sbjct: 3041 YGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAV---SVNGELFTWGQGADGRLG 3097
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA-EGHLYTWGRGF-------NST 266
+ + P++ L + I ++ + L+A + L+ WG G + +
Sbjct: 3098 HGDS--NNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGS 3155
Query: 267 SDVNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S + P Q + + Q G + ++LT +G+V G + L + +S +P+
Sbjct: 3156 SSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDS--TSVQPIPT 3213
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L + Q+A GA H +T + + +WG EHGQ G +T P++V
Sbjct: 3214 L---VDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIV 3267
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 110/237 (46%), Gaps = 17/237 (7%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H+LALT GKV+SWG+GS+G LG G P V G R I HISAG
Sbjct: 517 GNHILALTK-----DGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDR--IVHISAGS 569
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
HS V++ G L+T G G++G+LGHG+ P V + Q+ CG + L
Sbjct: 570 MHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLAL 629
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D G QV+ +G G G+LG V P IG +V I S AL+ +G
Sbjct: 630 DDTG-QVWSWGDGDYGKLGRPGSDQNKVPKPISGIG-STSPVVKIICGNQISMALTKDGK 687
Query: 256 LYTWG------RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
LY+WG G + V P+ + S S ++G H + LT D +V G
Sbjct: 688 LYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 151/378 (39%), Gaps = 66/378 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPSSVIG 90
KV++ G G+LG G + +P L + +++ + GG H LA+T+
Sbjct: 3887 KVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTT-----Q 3941
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WG G G+LG G V+ P + + G +HS ++D G L+T
Sbjct: 3942 GELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKH--VIDAGCGSSHSACITDDGSLYTW 3999
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G+LGH D+ + P VS+ + V +ACG + L G V+ +G G
Sbjct: 4000 GKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGC-VFSWGDGDY 4058
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + V P+ L ++ + S AL+ GH+YTWG+G
Sbjct: 4059 GKLGRGGNEGSKV--PKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKG-------- 4108
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ LG P RV +
Sbjct: 4109 ----------------------------DYYRLGHGDDSHQRTPRRV------------L 4128
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L VI I G+ H V TE+ + +WG + GQ+G T PK +N+ D
Sbjct: 4129 GLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITDNI-- 4186
Query: 391 RDTQLEVFCGSGFTYAIS 408
V CGS + A S
Sbjct: 4187 --CIDHVACGSAHSIAWS 4202
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 139/305 (45%), Gaps = 22/305 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G KVF WG QLG ++ +A P+ R + G S VSD G +F
Sbjct: 2923 GNKVFVWGLNDMRQLG-TDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFA 2981
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGS 207
CG+G+ G+LG G + + P ++SS V ++A C RH L + D +V+ +G
Sbjct: 2982 CGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTAD---GKVFSWGD 3038
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
G+ GQLG ++S P++ I +S SAA+S G L+TWG+G +
Sbjct: 3039 GQYGQLG--HGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRL 3096
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVS 318
+++ P+ + + + S A G + L GD + G G L + S
Sbjct: 3097 GHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSS 3156
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
ST + SN +IQI G S ++T+ + TWG GE+ +LG +T Q
Sbjct: 3157 STDVPVQVITFPSN-----IIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPI 3211
Query: 379 PKVVN 383
P +V+
Sbjct: 3212 PTLVD 3216
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 138/324 (42%), Gaps = 31/324 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF WG GQLG E P+ I+ G V+D G ++ G
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLS--ELNPAMITGGEQTLFAVTDDGKVYASGY 3893
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G+LG G + ++P ++S + V +IA G +H L + ++Y +G G
Sbjct: 3894 AAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQ---GELYAWGEG 3950
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
+ G+LG+ ++++P + L ++ SA ++ +G LYTWG+G
Sbjct: 3951 EDGKLGLGT--TVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLG 4008
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
N + P+ L S+L Q G L T G V G +G L
Sbjct: 4009 HNDHETQHKPK-LVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNE 4067
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
S P +K+ +L G VI++ G++ S +T + TWG G++ +LG G+ Q
Sbjct: 4068 GSKVP-----KKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQR 4122
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGS 401
P+ V LG + +++ CGS
Sbjct: 4123 TPRRV-LG--LLAHENVIDIGCGS 4143
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
NH+L LT DG+V G +G+L S T P +VA L G +++ I+AG+ HS
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVA-----ALSGDRIVHISAGSMHS 572
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
A VTE+ + TWG G +G+LG GN D++ P +V E N ++V CGSG + ++
Sbjct: 573 AAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIV----EGLNGVKIVQVDCGSGDAHTLA 628
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 52/217 (23%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG--GAHVLA----------- 81
++++WG G DG+LG G +++ P+L+ +S +ACG AH LA
Sbjct: 3084 ELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGD 3143
Query: 82 ---------------------LTSPSSVIG--------------GKVFSWGRGSSGQLGH 106
+T PS++I GKV++WG+G +LG+
Sbjct: 3144 GSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGN 3203
Query: 107 GEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
++ P P T DG TIT ++ G H ++ SG +++ GD GQ G+
Sbjct: 3204 DST--SVQPIP-TLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTIC 3260
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+ P V+S + +IACG HS+ + L V
Sbjct: 3261 NRKPQIVASLKGHRICKIACGSSHSIAFAQGSLTTAV 3297
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H L L KD +VY +G G G LG+ S + P L IV ISA SA
Sbjct: 519 HILALTKD---GKVYSWGQGSNGVLGIGN--TESQTAPTAVAALSGDRIVHISAGSMHSA 573
Query: 249 ALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTGDG 298
A++ +G LYTWG+G + D P + + + Q G H L L G
Sbjct: 574 AVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAI 357
+V G +G L P + P + +S + V++I G + S +T++ +
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVP-----KPISGIGSTSPVVKIICGNQISMALTKDGKL 688
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVV 382
+WG G+ QLG GN PK++
Sbjct: 689 YSWGCGDTYQLGHGNQEHVRQPKLI 713
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 234 DIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDV--NCPQSLPSSLS------FSQ 283
D EI+ I N G+ AL+ +G +Y+WG+G N + Q+ P++++
Sbjct: 505 DEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVH 564
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
+ G H +T DG + G +G L P V L+GVK++Q+
Sbjct: 565 ISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIV-----EGLNGVKIVQVDC 619
Query: 344 GA--EHSAVVTENRAIMTWGWGEHGQLGL-GNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
G+ H+ + + + +WG G++G+LG G+ +++ + +G + +++ CG
Sbjct: 620 GSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIG----STSPVVKIICG 675
Query: 401 SGFTYAISR 409
+ + A+++
Sbjct: 676 NQISMALTK 684
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 23/134 (17%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGML--------SDPERVSSTRPLSVALEKVSNLD 334
Q A G V++ DG+V G G L P ++SS LS+ +
Sbjct: 2962 QFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISS---LSMYV------- 3011
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V+ + ++ H VT + + +WG G++GQLG G+ PK++ + FQ + +
Sbjct: 3012 -VRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEI---FQAKHIR 3067
Query: 395 LEVFCGSGFTYAIS 408
EV CG+G + A+S
Sbjct: 3068 -EVSCGTGHSAAVS 3080
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 171/368 (46%), Gaps = 45/368 (12%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM---------------LACGGAHVLALTS 84
G G G+LG G +L P+ L VS+ +ACGG H +A+T
Sbjct: 28 GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTE 87
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G+V SWG G+ GQLG G D P V HR + ++ G+ H+ V+D
Sbjct: 88 D-----GEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHR--VCGVACGYYHTAVVTDV 140
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G + G G GQLG GD+ S P VS+ N+ + QIACGM H+L L + ++Y
Sbjct: 141 GLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL---SVNGEIYS 197
Query: 205 FGSGKRGQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGR 261
+G+G GQLGV K + V+ PQ + + + E A G R A++ + L++WG
Sbjct: 198 WGAGADGQLGVGKHQEETADVATPQ-KVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGL 256
Query: 262 GFNSTSDVNCPQSLPS---------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML- 311
G + + +S S +L A G +H VL+ +GE+ G +G L
Sbjct: 257 GADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLG 316
Query: 312 ---SDPE-RVSSTRPLS--VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+DP+ + R L L + L K+I+ A G H+ V++ + WG E
Sbjct: 317 HGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAED 376
Query: 366 GQLGLGNT 373
GQLG G T
Sbjct: 377 GQLGTGGT 384
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 158/355 (44%), Gaps = 47/355 (13%)
Query: 90 GGKVFSW-GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT---------------HISA 133
GGK S G G G+LGHG+ + L PK + F R+ ++ +++
Sbjct: 20 GGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRF--DKRFPVSLSFTALAHESLNGAIYVAC 77
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G +H+ V++ G + + G G GQLG G+ + P V + N V +ACG H+ V+
Sbjct: 78 GGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVV 137
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
L V +G G GQLG + S LP+ L++ +I I+ + ALS
Sbjct: 138 TDVGL---VMCWGKGNSGQLG--QGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVN 192
Query: 254 GHLYTWGRGFN----------STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVL 301
G +Y+WG G + T+DV PQ + F A G H + +T D +
Sbjct: 193 GEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLF 252
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + S P +V + NL ++ +AAG H+AV+++N I T G
Sbjct: 253 SWGLGADGRLGLGDSESRFSP-TVVRRSIENL---RICYVAAGGHHTAVLSDNGEIFTCG 308
Query: 362 WGEHGQLGLGNTCDQIHPKVVN-------LGDEFQNRDTQ-LEVFCGSGFTYAIS 408
G +GQLG G+ Q+ K L Q RD + ++ CG T IS
Sbjct: 309 RGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVIS 363
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 32/198 (16%)
Query: 21 KPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS 67
K +++EEE+ + + +++SWG G DG+LG G SP ++ S +
Sbjct: 223 KVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIEN 282
Query: 68 -SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
+ +A GG H L+ G++F+ GRGS GQLGHG+ L K H
Sbjct: 283 LRICYVAAGGHHTAVLSD-----NGEIFTCGRGSYGQLGHGDADPQLTLKKARALR-HGC 336
Query: 127 TITHI-----------SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
+ HI + G H+ +S +G +F G GQLG G +SPV+++S
Sbjct: 337 LLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTSL 396
Query: 176 VNKNVHQIACGMRHSLVL 193
V ++CG+ HS +
Sbjct: 397 -RGLVGDVSCGLVHSAAV 413
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 24/355 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D P L+ + +ACG H LA + + +++S
Sbjct: 35 VCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRN----ELYS 90
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D L P+P+ G R I I+ G +H V+ G + + G
Sbjct: 91 WGWGDFGRLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 148
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G+ P K+ +F + +A G HS+ + ++ ++YG+G G+ G LG+
Sbjct: 149 GQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITEN---GELYGWGWGRYGNLGL 205
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R P+ + ++V ++ + ++S+ G +YT+G G + D
Sbjct: 206 GDRNDRWN--PEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDS 263
Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
PQ L S SQ + GW H + LT G + G + G + + + P+ V
Sbjct: 264 LVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKF 323
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +V+QI+ G H+ VTE + +WG G +GQLG G+T D+ PK++
Sbjct: 324 PQDQ-----RVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKII 373
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 158/355 (44%), Gaps = 30/355 (8%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
S S V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ D
Sbjct: 11 SPPSRVLLISAGASHTVALLS-----GNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDA 65
Query: 124 HRYTITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
I I+ G +H+ S+S L++ G G FG+LGHG+ P + + + Q
Sbjct: 66 QH--IDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQ 123
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
IACG H L + + +V +G + GQLG+ V PQ + I ++A
Sbjct: 124 IACGDSHCLAV---TMEGEVQSWGRNQNGQLGLGNTEDSLV--PQKIQAFKGVPIKMVAA 178
Query: 243 NGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVL 294
+ S A++ G LY WG G +D P+ + S A GW H + +
Sbjct: 179 GAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISV 238
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ G + G S +G L S P +K+ L + Q++ G HS +T
Sbjct: 239 SSSGGIYTYGWSKYGQLGHGNFEDSLVP-----QKLQALSDKLISQVSGGWRHSMALTST 293
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+G+ D P V +F +++ CG T A++
Sbjct: 294 GLLFGWGWNKFGQVGVGDNLDHCSPVQV----KFPQDQRVVQISCGWRHTIAVTE 344
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 126/245 (51%), Gaps = 18/245 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H +A+T G+++
Sbjct: 139 EVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITE-----NGELY 193
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D P+ V+ D + + ++ GW H+ VS SG ++T G
Sbjct: 194 GWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVM--VACGWRHTISVSSSGGIYTYGWSK 251
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHG++ P K+ + +K + Q++ G RHS+ L L ++G+G K GQ+G
Sbjct: 252 YGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGL---LFGWGWNKFGQVG 308
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V D + S QV D +V IS + A++ + ++++WGRG N T D
Sbjct: 309 VG-DNLDHCSPVQVKF-PQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTID 366
Query: 269 VNCPQ 273
N P+
Sbjct: 367 RNSPK 371
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 26/299 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG G G+LG G D L PQ ++ L L + +ACG +H LA+T + G+V
Sbjct: 87 ELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLR-IKQIACGDSHCLAVT-----MEGEV 140
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G D+L P+ + F G I ++AG HS ++++G L+ G G
Sbjct: 141 QSWGRNQNGQLGLGNTEDSLVPQKIQAFKG--VPIKMVAAGAEHSVAITENGELYGWGWG 198
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD +P KVSS + +ACG RH++ + +Y +G K GQL
Sbjct: 199 RYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSS---GGIYTYGWSKYGQL 255
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G +PQ L D I +S S AL++ G L+ W G+N V
Sbjct: 256 G--HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGW--GWNKFGQVGVGD 311
Query: 274 SL----------PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+L P Q + GW H + +T V G +G L + + P
Sbjct: 312 NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSP 370
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 149/291 (51%), Gaps = 21/291 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
GG V++WGRG G+LGHG+ P+ G ITH++ G H+ VS G LFT
Sbjct: 25 GGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQ--VITHVTCGSYHTAAVSSKGNLFT 82
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS-LVLLKDCLGNQVYGFGSG 208
G G +G+LGHG+ HS+P +V S V V IACG RH+ +V + CL Y +G
Sbjct: 83 WGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCL----YTWGDK 138
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
+ G G D P++ L +V +SA G + L+ G +YTWG G
Sbjct: 139 ENGVAG-HGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLG 197
Query: 265 STSDVNC--PQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ NC P+ + + L Q + G H V+T DG++ GG HG L ++V+
Sbjct: 198 HGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+P V +LDGV + QI G HS +T + + TWG G+HG+LG G
Sbjct: 258 KP-----TLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHG 303
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 28/332 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G DG+LG G + P+L + + ++ + CG H A++S G +F+
Sbjct: 28 VYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSK-----GNLFT 82
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG PK V G + I+ G H+ V+ GCL+T GD
Sbjct: 83 WGGGMYGKLGHGNESGHSTPKRVDSLVG--LAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140
Query: 156 GQLGHGDYRSHS-SPVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G GHGD H +P + K V Q+ ACG H+ L +VY +G GK G+L
Sbjct: 141 GVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGF-HTGCLTD---AGEVYTWGEGKFGRL 196
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
G + R+ P++ L V IS G SA ++A+G +YT+G G V
Sbjct: 197 GHGAE--RNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKV 254
Query: 270 N-CPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
N +L L +Q GW+H + LT EV G HG L + P
Sbjct: 255 NKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTP--- 311
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
+ V L G KV+ +A+ EH+A + E ++
Sbjct: 312 --QLVEKLVGQKVVCVASYNEHTACLVEPHSV 341
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G G+LG G + SP+L+ ++CGG H +T+ GK++
Sbjct: 184 EVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTAD-----GKMY 238
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G GQLGHG+ V+ + P V DG +T I+ GW+HS ++ S ++T G+G
Sbjct: 239 TFGGGEHGQLGHGDKVNKVKPTLVKDLDG--VFLTQITCGWSHSVALTSSHEVYTWGNGD 296
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
G+LGHG + S+P V V + V +A H+ L++
Sbjct: 297 HGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 111/249 (44%), Gaps = 21/249 (8%)
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++T G G G+LGHGD P S + + + CG H+ + GN ++
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSK--GN-LFT 82
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G G+LG + S P+ L + +V I+ +A +++ G LYTWG N
Sbjct: 83 WGGGMYGKLGHGNESGHST--PKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140
Query: 265 STS---DVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ D Q P L +A G+ H LT GEV G G L
Sbjct: 141 GVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGEVYTWGEGKFGRLGHG 199
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+ P V L G + +QI+ G HSAVVT + + T+G GEHGQLG G+
Sbjct: 200 AERNCHSP-----RLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKV 254
Query: 375 DQIHPKVVN 383
+++ P +V
Sbjct: 255 NKVKPTLVK 263
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 177/361 (49%), Gaps = 34/361 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG G DGQLG G D LSP +L+ L L +S++ CG H +A + + V+
Sbjct: 35 VCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVI-CGADHTIAYSESHT----DVY 89
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG G G+LGHG D P+P+ H I I+ G +H V+ G + + G
Sbjct: 90 SWGWGDFGRLGHGNSSDLFTPQPIRQL--HGLKIKQIACGDSHCLAVTMEGQVQSWGRNQ 147
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G P K+ +F + +A G H+ + +D ++YG+G G+ G LG
Sbjct: 148 NGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTED---GELYGWGWGRYGNLG 204
Query: 215 V--SKDRI--RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
+ KDR+ VSLP H ++V ++ + ++S+ G LYT+G G
Sbjct: 205 LGDRKDRLVPEKVSLP------HGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHG 258
Query: 265 STSDVNCPQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+D P L + SF SQ + GW H + +T DG++ G + G + + V + P
Sbjct: 259 DYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSP 318
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V L KVI I+ G H+ VTE + + +WG G +GQLG G D+ P ++
Sbjct: 319 VQVKLPLEQ-----KVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVII 373
Query: 383 N 383
Sbjct: 374 K 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 34/358 (9%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
+ + V +++ G +H +AL S G V +WGRG GQLGHG+ D L P ++ +G
Sbjct: 11 APVRRVLLISAGASHSVALLS-----GNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEG 65
Query: 124 HRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
I + G +H+ S+S +++ G G FG+LGHG+ +P + + Q
Sbjct: 66 --LEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQ 123
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
IACG H L + + QV +G + GQLG+ ++D + +PQ + I +
Sbjct: 124 IACGDSHCLAVTME---GQVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFQGVPIKMV 176
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVL 292
+A + +AA++ +G LY WG G D P+ SLP A GW H +
Sbjct: 177 AAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTI 236
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ G + G S +G L + P ++ L G + QI+ G H+ VT
Sbjct: 237 SVSSSGGLYTYGWSKYGQLGHGDYADHLIP-----HQLEALQGSFISQISGGWRHTMAVT 291
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ + WGW + GQ+G+G+ D+ P V L E + + CG T A++
Sbjct: 292 SDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLE----QKVILISCGWRHTLAVTER 345
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 18/244 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G+++
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTED-----GELY 193
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ V+ G + + ++ GW H+ VS SG L+T G
Sbjct: 194 GWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVM--VACGWRHTISVSSSGGLYTYGWSK 251
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGDY H P ++ + + QI+ G RH++ + D ++YG+G K GQ+G
Sbjct: 252 YGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSD---GKLYGWGWNKFGQVG 308
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V + RS S QV + L +++ IS + A++ ++++WGRG N +D
Sbjct: 309 VGDNVDRS-SPVQVKLPLEQ-KVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTD 366
Query: 269 VNCP 272
N P
Sbjct: 367 RNVP 370
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 170/363 (46%), Gaps = 32/363 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +WG GQLG G D P + L + ++V+ +A G H +ALTS G V
Sbjct: 55 AILAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTS-----AGTVL 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR + GQLG+G + P V+ G R I ++ G +HS ++ +G L G
Sbjct: 110 AWGRNTEGQLGNGTTTSSGEPVAVSLPSGIR--IVAVAVGADHSLALTSTGSLLAWGSND 167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S S+PV V N V IA G H+LVL + +G+ + GQLG
Sbjct: 168 TGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPA-ALLAWGANREGQLG 226
Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
V + R V+LP + + I+ D S AL+++ + WG G
Sbjct: 227 DGTVVDRSRPVPVNLPT------GLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDG 280
Query: 265 STSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+T+ P + LP + A G H L LT DG L GG+H G L + S+ P
Sbjct: 281 TTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEP 340
Query: 323 LSVALEKVSNLDGVKVIQIAA-GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
++V+L G ++I IA+ ++H+ +T A + WG G LG G T D P
Sbjct: 341 VAVSLPG-----GTRLISIASRDSDHNVAITTEGAALAWGLNSQGHLGDGTTTDSATPVA 395
Query: 382 VNL 384
V+L
Sbjct: 396 VSL 398
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 145/324 (44%), Gaps = 24/324 (7%)
Query: 73 ACGGAHVLALTSPSS--VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
A GG+ A P+S V+ + +WG GQLG G D+ P V G T+
Sbjct: 34 AIGGSPASARHQPASAAVMSDAILAWGGNDGGQLGDGTTTDSSEPIAVRLPTG--TTVAA 91
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++AG HS ++ +G + G T GQLG+G S PV VS + +A G HS
Sbjct: 92 VAAGDRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSLPSGIRIVAVAVGADHS 151
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L + +GS GQLG + S S P + + I+A D + L
Sbjct: 152 LALTST---GSLLAWGSNDTGQLG--DGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVL 206
Query: 251 SAEG--HLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
+A G L WG G + D + P +LP+ L+ + A G +H L LT D V
Sbjct: 207 TATGPAALLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTV 266
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
L GG+ HG L D S P++V L G + IAAG HS +T + + W
Sbjct: 267 LAWGGNSHGQLGDGTTTGSLLPVTVVLPV-----GAEATAIAAGRLHSLALTSDGTALAW 321
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNL 384
G GQLG G+T D P V+L
Sbjct: 322 GGNHWGQLGNGSTSDSSEPVAVSL 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 117/269 (43%), Gaps = 25/269 (9%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+ GQLG G + +P + L ++V+ +A G H L LT+ + +WG
Sbjct: 162 AWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPA---ALLAWG 218
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G +VD P PV G T+T I+ G +HS ++ + G + GQ
Sbjct: 219 ANREGQLGDGTVVDRSRPVPVNLPTG--LTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQ 276
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G PV V V IA G HSL L D +G GQLG
Sbjct: 277 LGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTSD---GTALAWGGNHWGQLGNGS 333
Query: 218 DRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
S VSLP G I I S + D + A++ EG WG G +T+
Sbjct: 334 TSDSSEPVAVSLPG---GTRLISIA--SRDSDHNVAITTEGAALAWGLNSQGHLGDGTTT 388
Query: 268 DVNCPQ--SLPSSLSFSQAALGWNHVLVL 294
D P SLP+ + + A+G +H L L
Sbjct: 389 DSATPVAVSLPAGAALTSIAVGDDHSLAL 417
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG + GQLG G L P + L + + +A G H LALTS G
Sbjct: 265 TVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLALTS-----DGTAL 319
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG+G D+ P V+ G R I+ S +H+ ++ G G +
Sbjct: 320 AWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRL-ISIASRDSDHNVAITTEGAALAWGLNS 378
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G LG G ++PV VS + IA G HSL L
Sbjct: 379 QGHLGDGTTTDSATPVAVSLPAGAALTSIAVGDDHSLAL 417
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 165/346 (47%), Gaps = 23/346 (6%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G+ + L+P+ ++ + + + + CG + +A+ +PS G+V+SWG
Sbjct: 36 SWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAV-APSR---GQVYSWG 91
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG+ D P+P+ FF G + ++ G H+ V+ G LFT G GQ
Sbjct: 92 WGDFGRLGHGDCNDVFVPRPIEFFSGR--PVHRVACGDTHTLVVAGEGELFTFGRNQNGQ 149
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G SP V + + V +ACG HSL + V+ +G G+ G LG +
Sbjct: 150 LGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES---GTVFSWGWGRYGNLGDGE 206
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFNSTSDV 269
+ R LP +GL I +V SA +S +G ++T+ G G ++ V
Sbjct: 207 SQDR--YLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTV 264
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
C + S A GW H + G + G + G L + SS RP V +
Sbjct: 265 PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGD--SSDRPSPVLVGG 322
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
L G +V + G H+ VTE + +WG G +GQLG G D
Sbjct: 323 A--LAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 31/350 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYT 127
V+ ++CG +H +A+ S G V SWGRG GQLGHG+ + L PK + T D
Sbjct: 15 VTAVSCGSSHSVAILSC-----GIVTSWGRGEDGQLGHGQADECLAPKAISTLTDA---G 66
Query: 128 ITHISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
I + G ++ V+ S G +++ G G FG+LGHGD P + F + VH++ACG
Sbjct: 67 IESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACG 126
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H+LV+ + +++ FG + GQLG+ PQ+ + L + ++ +
Sbjct: 127 DTHTLVVAGE---GELFTFGRNQNGQLGLGH--TNDCLSPQLVVALQGERVRSVACGSEH 181
Query: 247 SAALSAEGHLYTWGRGF--NSTSDVNCPQSLPSS------LSFSQAALGWNHVLVLTGDG 298
S A + G +++WG G N + + LP+ + A GW H V++ DG
Sbjct: 182 SLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDG 241
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V G S +G L + T P VA L ++ +A G H+ + +
Sbjct: 242 RVFTFGWSKYGQLGHGDHTDRTVPCQVAA-----LRHTRISSVAGGWRHTMAADSSGNLY 296
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
WGW + GQLGLG++ D+ P V +G + L V CG T A++
Sbjct: 297 GWGWNKFGQLGLGDSSDR--PSPVLVGGALAGQRVSL-VTCGWRHTVAVT 343
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 120/232 (51%), Gaps = 15/232 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++++G +GQLG G +D LSPQL+ V +ACG H LA T G VF
Sbjct: 138 ELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATES-----GTVF 192
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG G G LG GE D P V +G R + GW HS VS+ G +FT G
Sbjct: 193 SWGWGRYGNLGDGESQDRYLPTRVVGLEGIR--MVSAECGWRHSAVVSEDGRVFTFGWSK 250
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ + P +V++ + + +A G RH++ D GN +YG+G K GQLG
Sbjct: 251 YGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMA--ADSSGN-LYGWGWNKFGQLG 307
Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+ S DR V + G + ++ + A++ G +Y+WGRG N
Sbjct: 308 LGDSSDRPSPVLVGGALAGQ---RVSLVTCGWRHTVAVTEGGRVYSWGRGVN 356
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 142/312 (45%), Gaps = 24/312 (7%)
Query: 9 TEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS 68
T+ G +++ A+ I QV +SWG G G+LG G +D P+ + S
Sbjct: 63 TDAGIESVVCGAEYTIAVAPSRGQV---YSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRP 119
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +ACG H L + G++F++GR +GQLG G D L P+ V G R +
Sbjct: 120 VHRVACGDTHTLVVAGE-----GELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGER--V 172
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
++ G HS ++SG +F+ G G +G LG G+ + P +V + CG R
Sbjct: 173 RSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWR 232
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
HS V+ +D +V+ FG K GQLG R+V P L I ++ +
Sbjct: 233 HSAVVSED---GRVFTFGWSKYGQLGHGDHTDRTV--PCQVAALRHTRISSVAGGWRHTM 287
Query: 249 ALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAAL---GWNHVLVLTGDGE 299
A + G+LY WG G +SD P + +L+ + +L GW H + +T G
Sbjct: 288 AADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGR 347
Query: 300 VLMLGGSHHGML 311
V G +G L
Sbjct: 348 VYSWGRGVNGQL 359
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
SS V ++CG HS+ +L + V +G G+ GQLG + P+ L
Sbjct: 8 SSEEEPGVTAVSCGSSHSVAILSCGI---VTSWGRGEDGQLG--HGQADECLAPKAISTL 62
Query: 233 HDIEIVGISANGDRSAALS-AEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQ 283
D I + + + A++ + G +Y+WG G +DV P+ + S +
Sbjct: 63 TDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHR 122
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H LV+ G+GE+ G + +G L P + V L G +V +A
Sbjct: 123 VACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSP-----QLVVALQGERVRSVAC 177
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
G+EHS TE+ + +WGWG +G LG G + D+ P +VV L
Sbjct: 178 GSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGL 219
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 25 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 80
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 81 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 138
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 139 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 195
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 196 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + G+ H + LT DG++ G + G + + P+ V
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 315 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 363
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 30/350 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 6 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 58
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 59 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 118
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + + +V +G + GQLG+ V PQ I I ++A + +
Sbjct: 119 SHCLAVTME---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKMVAAGAEHT 173
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
AA++ +G LY WG G +D P+ + S+ S A GW H + ++ G
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P K+ L + QI+ G H+ +T + +
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGFRHTMALTSDGKLYG 288
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 289 WGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTE 334
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 18/249 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 183
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 184 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 241
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 242 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSD---GKLYGWGWNKFGQVG 298
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V + + S QV D ++V +S + A++ +++ WGRG N + D
Sbjct: 299 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVD 356
Query: 269 VNCPQSLPS 277
N P+ + +
Sbjct: 357 RNFPKIIEA 365
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 73 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 127
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 128 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 185
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 242
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 243 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGW--GWNKFGQVG 298
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 299 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 358
Query: 321 RP 322
P
Sbjct: 359 FP 360
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ V I+ G HS+ LL G+ V +G G+ GQLG R P L +I
Sbjct: 4 RKVLIISAGASHSVALLS---GDIVCSWGRGEDGQLGHGDAEDRPS--PTQLSALDGHQI 58
Query: 238 VGISANGDRSAALSAEG-HLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGW 288
V ++ D + A S G +Y+WG G ++SD+ P + + + Q A G
Sbjct: 59 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 118
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L +T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+
Sbjct: 119 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHT 173
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGS 401
A VTE+ + WGWG +G LGLG+ D++ P +V + G E + R T + G+
Sbjct: 174 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 402 GFTYAISRH 410
+TY S++
Sbjct: 234 LYTYGWSKY 242
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 167/350 (47%), Gaps = 30/350 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 8 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 60
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 61 VSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 120
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + + +V +G + GQLG+ V PQ I I ++A + +
Sbjct: 121 SHCLAVTXE---GEVQSWGRNQNGQLGLGDTEDSLV--PQKIQAFEGIRIKXVAAGAEHT 175
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGE 299
AA++ +G LY WG G +D P+ + S+ S A GW H + ++ G
Sbjct: 176 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P K+ L + QI+ GA H+ +T + +
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGARHTXALTSDGKLYG 290
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 291 WGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTE 336
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 162/355 (45%), Gaps = 24/355 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 27 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GXEVYS 82
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 83 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTXEGEVQSWGRNQN 140
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 141 GQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 197
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R V P+ + ++ + ++S G LYT+G G D
Sbjct: 198 GDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH 255
Query: 270 NCPQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + S SF SQ + G H LT DG++ G + G + + P+ V
Sbjct: 256 LIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRF 315
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 316 P-----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 365
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 140/302 (46%), Gaps = 24/302 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q +V+SWG G G+LG G D +P + + +ACG +H LA+T
Sbjct: 75 QSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXE----- 129
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 130 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKXVAAGAEHTAAVTEDGDLYGW 187
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + +ACG RH++ + +Y +G K
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV---SYSGALYTYGWSKY 244
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 245 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGW--GWNKFGQVG 300
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 301 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 360
Query: 321 RP 322
P
Sbjct: 361 FP 362
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ V I+ G HS+ LL G+ V +G G+ GQLG R P L +I
Sbjct: 6 RKVLIISAGASHSVALLS---GDIVCSWGRGEDGQLGHGDAEDRPS--PTQLSALDGHQI 60
Query: 238 VGISANGDRSAALSAEG-HLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGW 288
V ++ D + A S G +Y+WG G ++SD+ P + + + Q A G
Sbjct: 61 VSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 120
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L +T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+
Sbjct: 121 SHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKXVAAGAEHT 175
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGS 401
A VTE+ + WGWG +G LGLG+ D++ P +V + G E + R T + G+
Sbjct: 176 AAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235
Query: 402 GFTYAISRH 410
+TY S++
Sbjct: 236 LYTYGWSKY 244
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 179/365 (49%), Gaps = 37/365 (10%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
+E E +V V+S+G G G+LG G ++L+P+ + LS + +A G H LALT
Sbjct: 38 QESETNANLVSVFSFGMGMYGKLGHGDTANQLAPK--KIEGLSDIQAIAAGTNHSLALTK 95
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G V+S+G G G+LGHG L PK + I I+AG HS ++ S
Sbjct: 96 -----SGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSD----IQAIAAGDFHSLALTKS 146
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G +++ G+GT G LGHG+ S+P K+ S +V IA G HSL L K VY
Sbjct: 147 GDVYSFGNGTSG-LGHGNTEDQSTPKKIESL--SDVQAIAAGGNHSLALTK---SGDVYS 200
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
FG G G+LG S P+ L DI+ I+A G+ S AL+ G +Y++G G +
Sbjct: 201 FGFGLFGRLG--HGDTDSQLEPKKIEDLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLH 256
Query: 265 ------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T + P+ + A G NH L LT GEV G + G L +
Sbjct: 257 GQLGHGDTENQLTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDD 316
Query: 319 STRPLSVALEKVSNLDGVKVIQ-IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P ++G+K IQ IAAG HS +T++ + ++G G G LG G+T +Q+
Sbjct: 317 QLTP--------KKIEGLKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQL 367
Query: 378 HPKVV 382
PK +
Sbjct: 368 EPKKI 372
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 154/305 (50%), Gaps = 22/305 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +V+SWG+G GQLGHG+ P+ V F G + + +S G H+ + ++G +FT
Sbjct: 5 GSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLG--FNVRQVSCGNQHTAILMENGEVFT 62
Query: 150 CGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G G FGQLG G + S+P VS+ K+V Q+ACG H+ L+ + Q+Y +GS
Sbjct: 63 FGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDN---GQLYTWGS 119
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
G+ G+LG D +R S P++ L E+ ++A G S+ + G+L TWG G+
Sbjct: 120 GEYGRLG-HGDEVRQAS-PKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQL 177
Query: 264 --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+D P+ + + A G +H L+LT EV G G L +
Sbjct: 178 GHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKH 237
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P+ ++ L GV VI I+ G HSA +T + TWG G+ GQLG G+ Q P
Sbjct: 238 AEPI-----MITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIP 292
Query: 380 KVVNL 384
VV +
Sbjct: 293 VVVEV 297
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 123/230 (53%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V+++G G GQLG G + +P L++ V +ACG H AL + G+
Sbjct: 59 EVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCAL-----IDNGQ 113
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG G G+LGHG+ V PK V G +T ++AG HS + + G L T G
Sbjct: 114 LYTWGSGEYGRLGHGDEVRQASPKLVESLQGKE--VTFVAAGGFHSSVIIEGGNLLTWGG 171
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G FGQLGHGD +P V H++ACG H+L+L + +V+ +GSG+ G+
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQS---QEVWTWGSGEFGK 228
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
LG+ + + P + L + ++ IS G SAAL++EG LYTWG G
Sbjct: 229 LGIGDEEKHAE--PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q +VW+WG+G G+LG G P ++ V ++ GG H ALTS G
Sbjct: 214 QSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSE-----G 268
Query: 92 KVFSWGRGSSGQLGHGE 108
+++WG G GQLGHG+
Sbjct: 269 VLYTWGGGDKGQLGHGD 285
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 166/331 (50%), Gaps = 31/331 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K ++ G G++G+LG G + SP + S V +A GG H LALT+ G+
Sbjct: 2751 KAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTA-----DGR 2805
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG++ P+ + +G R + ++AG NHS V+ SG L+T G
Sbjct: 2806 VFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFR--VRDVAAGSNHSAAVTSSGELYTWGL 2863
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + +P +V S V + V Q++CG R +L L++ G VY +G G
Sbjct: 2864 GEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE---GGLVYSWGDGDF 2920
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G+LG + S P + L + + + S AL+ GH+YTWG+ G
Sbjct: 2921 GKLG--RGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHG 2978
Query: 265 STSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
S V P +L L + ++G H L +T G+V G + HG + + R
Sbjct: 2979 SDQHVRWP-TLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRR 3037
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P V +DG+K+ ++A G+ HS T
Sbjct: 3038 P-----TLVQGIDGIKITRVACGSSHSVAWT 3063
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 138/335 (41%), Gaps = 63/335 (18%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G G+LGHG + P+ + G + ++ G
Sbjct: 3709 GGKHCLALSSE-----GEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGK--DVVDVACG 3761
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL- 193
HS ++ G L+T G G +G+LGHGD P V + + V +ACG +
Sbjct: 3762 GAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCA 3821
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ D G V+ +G G G+LG + +P L + I+ + S ALS
Sbjct: 3822 ITDEEGGTVWSWGDGDYGKLG--RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNN 3879
Query: 254 GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G +YTWG+G D L G H
Sbjct: 3880 GSVYTWGKG----------------------------------DYHRLGHGVDEH----- 3900
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
RP +KV L G KVI I+ GA H V T+ + TWG + GQLG G T
Sbjct: 3901 -----VRRP-----KKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTT 3950
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V QN+ V CGS T A S
Sbjct: 3951 TGIQKPRLVA---ALQNKKIN-RVSCGSAHTVAWS 3981
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 172/411 (41%), Gaps = 33/411 (8%)
Query: 8 ETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLS-SL 66
E E+G SA + + I+ +V+ WG QLG + PQ ++ + SL
Sbjct: 2672 EFEQGDSAFNKSQQSVIQPISSVSGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSL 2731
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
+S+ GG+ L L + S GK ++ G GS+G+LG G + P +T H
Sbjct: 2732 QPISV--AGGSKSLFLVTQS----GKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVV 2785
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ +G H+ ++ G +F+ G+G G+LGHGD S +P + + V +A G
Sbjct: 2786 RKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAG 2845
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS + ++Y +G G+ G+LG D + ++ P+ L +V +S G R
Sbjct: 2846 SNHSAAVTS---SGELYTWGLGEYGRLG-HGDNLTQLT-PKRVESLVGQRVVQVSC-GSR 2899
Query: 247 SA---ALSAEGHLYTW--------GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
A AL G +Y+W GRG + C S L G + LT
Sbjct: 2900 DAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALT 2959
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+G V G + L P V L G KVI ++ GA H VT+
Sbjct: 2960 CNGHVYTWGKGDYFRLGHGSDQHVRWP-----TLVEGLRGKKVIGVSVGALHCLAVTDAG 3014
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G+ P +V D + V CGS + A
Sbjct: 3015 QVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKIT----RVACGSSHSVA 3061
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 199 GNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHL 256
G Q+YG+G RGQLG V +++ ++ + L I++ G G+++ A++++G +
Sbjct: 3613 GGQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAG----GEQTLFAITSDGRV 3668
Query: 257 YTWGRGFNSTSDVNCPQSL--PSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGS 306
Y G G + +S+ PS L Q G H L L+ +GEV G
Sbjct: 3669 YATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEG 3728
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L ++ RP + +L G V+ +A G HSA +T + TWG G +G
Sbjct: 3729 EDGKLGHGNKLPCDRP-----RIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYG 3783
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
+LG G++ DQ+ PK+V ++ D V CGSG
Sbjct: 3784 RLGHGDSDDQLKPKLVEALLGYRVMD----VACGSG 3815
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 143 bits (360), Expect = 2e-31, Method: Composition-based stats.
Identities = 117/401 (29%), Positives = 191/401 (47%), Gaps = 70/401 (17%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELS-PQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGG 91
++++WG+ GQLG G ++ LS P+ ++ S + M+ CGG H +A+ S V
Sbjct: 1142 ELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFV--- 1198
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+SWG GQLGHG + V+ PK + G + I I+AG+ H+ + SG LF+
Sbjct: 1199 --YSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQK--IQAIAAGFAHNIVLKKSGELFSF 1254
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNK-----------NVHQIACGMRHSLVLLKDCLG 199
G G FGQLG G + S + P ++ +N + QIACG HS++ ++
Sbjct: 1255 GYGDFGQLGTGSFHSKNIPTRIE--INAIMGGLQHHDGGKITQIACGFGHSVICSEN--- 1309
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+VY +G GK+GQLG ++S P++ L + IS + A + ++Y+W
Sbjct: 1310 GEVYSWGLGKQGQLG--HKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSW 1365
Query: 260 GRG----FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLT-------------- 295
G G +SD + +S+P + F S+ G NH + +T
Sbjct: 1366 GSGEHMKLGHSSDKD--ESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDED 1423
Query: 296 -------GDGEVLMLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+ G + HG L D + +P+ A++ V++L+ +I I+ G+
Sbjct: 1424 EENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLN---LIDISCGS 1480
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ SA++T N AI WG G GQ+G G D P ++L D
Sbjct: 1481 DFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLND 1521
Score = 112 bits (281), Expect = 3e-22, Method: Composition-based stats.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 57/293 (19%)
Query: 17 INNAKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQL 60
+N ++PK+ EE Q++ + +S+G G GQLGTG H + P
Sbjct: 1216 VNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTR 1275
Query: 61 LNLSSL---------SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+ ++++ ++ +ACG H + + G+V+SWG G GQLGH +
Sbjct: 1276 IEINAIMGGLQHHDGGKITQIACGFGHSVICSE-----NGEVYSWGLGKQGQLGHKVFEN 1330
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
P+ + G +T IS G H+ +D +++ G G +LGH + S P
Sbjct: 1331 ISKPRLIETLRG----VTKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKV 1386
Query: 172 VSSFVNKNVHQIACGMRHSLVL-LKDCLGNQ-----------------VYGFGSGKRGQL 213
V F+ KNV ++ CG H++ + D L N +Y +GS + G+L
Sbjct: 1387 VDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKL 1446
Query: 214 GVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ D ++S +P G++ + ++ IS D SA +++ +Y WG G
Sbjct: 1447 GLGGD-LKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYVWGCG 1498
Score = 97.8 bits (242), Expect = 9e-18, Method: Composition-based stats.
Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 35/298 (11%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKN-VHQIACGM 187
+S GW+H ++D G L+T G GQLGHG ++ S P +V F K+ + + CG
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGG 1186
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H++ + + VY +GS K GQLG + S P+V L +I I+A +
Sbjct: 1187 EHTIAVDSNYF---VYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAGFAHN 1242
Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL-----------SFSQAALGWNH 290
L G L+++G G S N P + + +Q A G+ H
Sbjct: 1243 IVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGH 1302
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
++ + +GEV G G L + ++P + L GV +I+ G H+
Sbjct: 1303 SVICSENGEVYSWGLGKQGQLGHKVFENISKP-----RLIETLRGVT--KISCGHFHTVA 1355
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
T+ + + +WG GEH +LG + D+ PKVV D F ++ +V CG T I+
Sbjct: 1356 TTDLKNVYSWGSGEHMKLGHSSDKDESVPKVV---DFFIQKNVS-KVVCGQNHTMTIT 1409
Score = 54.7 bits (130), Expect = 9e-05, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 238 VGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSLSFSQAA-------L 286
+ +S D A ++ +G LYTWG +VN SLP + F +
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G H + + + V G G L + V+ +RP + + L G K+ IAAG
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRP-----KVIEELTGQKIQAIAAGF 1239
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLG-----NTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
H+ V+ ++ + ++G+G+ GQLG G N +I + G + + ++ CG
Sbjct: 1240 AHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACG 1299
Query: 401 SGFTYAISRH 410
G + S +
Sbjct: 1300 FGHSVICSEN 1309
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI--HPKVVNLGDEFQNRDTQ 394
K I+++ G +H AV+T++ + TWG + GQLG G ++ PK V D F+ +
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRV---DFFRGKSPI 1179
Query: 395 LEVFCGSGFTYAI 407
V CG T A+
Sbjct: 1180 FMVECGGEHTIAV 1192
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 164/356 (46%), Gaps = 26/356 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
SWG G DGQLG G D L P +L+ ++ ++ + CG H A + +V+S
Sbjct: 45 SWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQ----QVYS 100
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+PV G + I I+ G +H V+ +G + + G
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQN 158
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ SF V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 159 GQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 215
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R V P+ + ++V I+ + +S+ G LYT+G G D
Sbjct: 216 GDRNDRLV--PEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH 273
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + S SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 274 LVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKF 333
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ KV Q+A G H+ TE + + +WG G GQLG G D+ P +++
Sbjct: 334 PEDQ-----KVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMID 384
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 149/328 (45%), Gaps = 23/328 (7%)
Query: 6 MEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
+ G +++I A E+EQQV +SWG G G+LG G D +PQ +
Sbjct: 71 FDAAAPGITSVICGADHTTAYSEDEQQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQ 127
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
+ +ACG +H LA+T + G+V SWGR +GQLG G D+L P+ + F+G
Sbjct: 128 GIKIKQIACGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEG-- 180
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ I+AG H+ V++ G L+ G G +G LG GD P KVSS + + IAC
Sbjct: 181 VCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIAC 240
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G RH++ + +Y +G K GQLG +P L D I IS
Sbjct: 241 GWRHTITVSSS---GSLYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDSSISQISGGWR 295
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGD 297
+ AL+++G LY WG G T D P P +Q A GW H L T
Sbjct: 296 HTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEK 355
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSV 325
V G G L E V +P+ +
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNKPVMI 383
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 32/353 (9%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V +++ G +H +AL + G + SWGRG GQLGHG+ D L P ++ FD
Sbjct: 23 AVVLVSAGASHSVAL-----LAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPG 77
Query: 128 ITHISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
IT + G +H + + D +++ G G FG+LGHG+ +P V + + QIACG
Sbjct: 78 ITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACG 137
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H L + + +V +G + GQLG+ ++D + LPQ + + I+A
Sbjct: 138 DSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQSFEGVCVKMIAAGA 190
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
+ +AA++ +G LY WG G +D P+ + S A GW H + ++
Sbjct: 191 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSS 250
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G S +G L + P K+ L + QI+ G H+ +T +
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDSSISQISGGWRHTMALTSDGK 305
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+G+T D P V +F +V CG T A +
Sbjct: 306 LYGWGWNKFGQVGVGDTDDHCFPVQV----KFPEDQKVAQVACGWRHTLAFTE 354
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G GQLG G D L P L SS+S ++ G H +ALTS GK++
Sbjct: 254 LYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSD-----GKLYG 308
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G+ D +P V F + + + ++ GW H+ ++ +F+ G GT
Sbjct: 309 WGWNKFGQVGVGDTDDHCFPVQVKFPEDQK--VAQVACGWRHTLAFTEKKNVFSWGRGTS 366
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLGHG+ + PV + +
Sbjct: 367 GQLGHGEIVDRNKPVMIDAL 386
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 190/407 (46%), Gaps = 53/407 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G GQLG ++ +P + + + + + G + +ALT G+V+S
Sbjct: 51 VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTH-----NGEVYS 105
Query: 96 WGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG+ G LGH + + + P+ + G + I IS G H V++ G ++T G+
Sbjct: 106 WGKNKGGILGHEDRLSFNMTQPERIEKLLGKK--IKQISCGQFHMAAVTEDGEVYTWGNK 163
Query: 154 TFGQLGHG------------------DYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLL 194
FG+LGH DY S P K+ S N Q+ACG++ ++VL
Sbjct: 164 EFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS 223
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D +VY FG + G LG D+ SV+ PQ+ L+DI V ISA AA++ +G
Sbjct: 224 ED---GKVYTFGYNQYGSLGYVSDQ-NSVTTPQLIKDLNDI--VKISAGYSFCAAITKQG 277
Query: 255 HLYTWGRGFNST--SDVNCPQSLPSSL-------SFSQAALGWNHVLVLTGDGEVLMLGG 305
LYTWG N + + Q+ PS + S + G N + LT G++ G
Sbjct: 278 KLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGF 337
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L + P V ++ K+I+IA G H+A +TE+ + +G G
Sbjct: 338 GGDGQLGHGNKSDLYAPRHVEFKQ-------KIIKIACGGSHAAFITEDNQLYQFGRGSE 390
Query: 366 GQLGLG-NTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
GQLG+G N + + NL F+ + ++V CG T AI++
Sbjct: 391 GQLGIGQNVASEASIRSTPNLVQYFKGKQV-VDVTCGGEHTIAITQE 436
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG +GQLG + + P ++ S +S+ ++CG + ALT G++
Sbjct: 278 KLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQ-----GQL 332
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG G GQLGHG D P+ V F + I I+ G +H+ F+++ L+ G G
Sbjct: 333 YTWGFGGDGQLGHGNKSDLYAPRHVEF----KQKIIKIACGGSHAAFITEDNQLYQFGRG 388
Query: 154 TFGQLGHG-----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
+ GQLG G + S+P V F K V + CG H++ + ++
Sbjct: 389 SEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 30/238 (12%)
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G S K + + V A G + +L + VY +G G GQLG+
Sbjct: 7 LGLGKNIFRSGEFKKKAILGAGVCLTAGGFIYQSILANEYPETIVYSWGYGGFGQLGLQN 66
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------------FNS 265
+ + P L D +I + A S AL+ G +Y+WG+ FN
Sbjct: 67 E--NNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNM 124
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
T + L + Q + G H+ +T DGEV G G L E + + + +
Sbjct: 125 TQPERIEKLLGKKI--KQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKI 182
Query: 326 AL--------------EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+K+ +L +K Q+A G + + V++E+ + T+G+ ++G LG
Sbjct: 183 KRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLG 240
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 169/362 (46%), Gaps = 32/362 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIGG 91
V SWG G DGQLG G D P +L + + S++ CG H A +
Sbjct: 46 VCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEEL---- 101
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++SWG G G+LGHG D P+P+ G R IT I+ G +H V+ +G + + G
Sbjct: 102 QLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR--ITQIACGDSHCLAVTVAGHVHSWG 159
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG G+ P K+ +F V IA G H+ + +D +YG+G G+ G
Sbjct: 160 RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTED---GDLYGWGWGRYG 216
Query: 212 QLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
LG+ DR+ +P+ ++ ++V ++ + +S+ G +YT+G G
Sbjct: 217 NLGLGDRDDRL----IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH 272
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
D P L + + SQ + GW H + L DG++ G + G + +
Sbjct: 273 GDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCS 332
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V KV+Q+A G H+ +TE + + +WG G GQLG G D+ PK+
Sbjct: 333 PVQVNFPNEQ-----KVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKM 387
Query: 382 VN 383
++
Sbjct: 388 ID 389
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 161/361 (44%), Gaps = 33/361 (9%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
S +I A +EE Q+ +SWG G G+LG G D +PQ + ++ +A
Sbjct: 84 SVVICGADHTTAYSDEELQL---YSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 140
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H LA+T + G V SWGR +GQLG G D+L P+ + F+G R + I+A
Sbjct: 141 CGDSHCLAVT-----VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR--VKMIAA 193
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ V++ G L+ G G +G LG GD P KVSS + + +ACG RH++ +
Sbjct: 194 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 253
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+Y +G K GQLG +P L D I IS + AL+A+
Sbjct: 254 SSS---GSIYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 308
Query: 254 GHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
G LY WG G D P + P+ Q A GW H L LT V G
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGR 368
Query: 306 SHHGMLSDPERVSSTRP-----LSVALEKVSNLDGVKVIQIAAG-----AEHSAVVTENR 355
G L E V P LS L+ K + ++A +E A+V + +
Sbjct: 369 GTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIVPDEK 428
Query: 356 A 356
A
Sbjct: 429 A 429
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 168/369 (45%), Gaps = 38/369 (10%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
DE P+ + SV +++ G +H +AL S GG V SWGRG GQLGHG+ D
Sbjct: 16 DEAVPE----APERSVVLISAGASHSVALLS-----GGVVCSWGRGEDGQLGHGDAEDRP 66
Query: 114 YPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPV 170
P +T F D + + G +H+ SD L++ G G FG+LGHG+ +P
Sbjct: 67 VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 126
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQV 228
+ + + QIACG H L + + V+ +G + GQLG+ ++D + LPQ
Sbjct: 127 PIQALQGVRITQIACGDSHCLAV---TVAGHVHSWGRNQNGQLGLGNTEDSL----LPQK 179
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLS 280
+ + I+A + +AA++ +G LY WG G D P+ + S
Sbjct: 180 IQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 239
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A GW H + ++ G + G S +G L + P K+ L + Q
Sbjct: 240 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDTTISQ 294
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
I+ G H+ + + + WGW + GQ+G+G+ D P VN F N ++V CG
Sbjct: 295 ISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVN----FPNEQKVVQVACG 350
Query: 401 SGFTYAISR 409
T A++
Sbjct: 351 WRHTLALTE 359
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 169/362 (46%), Gaps = 32/362 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIGG 91
V SWG G DGQLG G D P +L + + S++ CG H A +
Sbjct: 41 VCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEEL---- 96
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++SWG G G+LGHG D P+P+ G R IT I+ G +H V+ +G + + G
Sbjct: 97 QLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVR--ITQIACGDSHCLAVTVAGHVHSWG 154
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG G+ P K+ +F V IA G H+ + +D +YG+G G+ G
Sbjct: 155 RNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTED---GDLYGWGWGRYG 211
Query: 212 QLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
LG+ DR+ +P+ ++ ++V ++ + +S+ G +YT+G G
Sbjct: 212 NLGLGDRDDRL----IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH 267
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
D P L + + SQ + GW H + L DG++ G + G + +
Sbjct: 268 GDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCS 327
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V KV+Q+A G H+ +TE + + +WG G GQLG G D+ PK+
Sbjct: 328 PVQVNFPNEQ-----KVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKM 382
Query: 382 VN 383
++
Sbjct: 383 ID 384
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 161/361 (44%), Gaps = 33/361 (9%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
S +I A +EE Q+ +SWG G G+LG G D +PQ + ++ +A
Sbjct: 79 SVVICGADHTTAYSDEELQL---YSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 135
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H LA+T + G V SWGR +GQLG G D+L P+ + F+G R + I+A
Sbjct: 136 CGDSHCLAVT-----VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR--VKMIAA 188
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ V++ G L+ G G +G LG GD P KVSS + + +ACG RH++ +
Sbjct: 189 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 248
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+Y +G K GQLG +P L D I IS + AL+A+
Sbjct: 249 SSS---GSIYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 303
Query: 254 GHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
G LY WG G D P + P+ Q A GW H L LT V G
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGR 363
Query: 306 SHHGMLSDPERVSSTRP-----LSVALEKVSNLDGVKVIQIAAG-----AEHSAVVTENR 355
G L E V P LS L+ K + ++A +E A+V + +
Sbjct: 364 GTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIVPDEK 423
Query: 356 A 356
A
Sbjct: 424 A 424
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 168/369 (45%), Gaps = 38/369 (10%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
DE P+ + SV +++ G +H +AL S GG V SWGRG GQLGHG+ D
Sbjct: 11 DEAVPE----APERSVVLISAGASHSVALLS-----GGVVCSWGRGEDGQLGHGDAEDRP 61
Query: 114 YPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPV 170
P +T F D + + G +H+ SD L++ G G FG+LGHG+ +P
Sbjct: 62 VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 121
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQV 228
+ + + QIACG H L + + V+ +G + GQLG+ ++D + LPQ
Sbjct: 122 PIQALQGVRITQIACGDSHCLAV---TVAGHVHSWGRNQNGQLGLGNTEDSL----LPQK 174
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLS 280
+ + I+A + +AA++ +G LY WG G D P+ + S
Sbjct: 175 IQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A GW H + ++ G + G S +G L + P K+ L + Q
Sbjct: 235 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDTTISQ 289
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
I+ G H+ + + + WGW + GQ+G+G+ D P VN F N ++V CG
Sbjct: 290 ISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVN----FPNEQKVVQVACG 345
Query: 401 SGFTYAISR 409
T A++
Sbjct: 346 WRHTLALTE 354
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 141 bits (356), Expect = 5e-31, Method: Composition-based stats.
Identities = 116/444 (26%), Positives = 192/444 (43%), Gaps = 85/444 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
+++SWG+G G LG G D P+ L + + +ACG H + LT
Sbjct: 309 ELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKK----- 363
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K+ +WG+G G+LGHG+ D L PK + +D + ISAG +HS +S+ L+T G
Sbjct: 364 KILTWGQGQGGRLGHGDEDDVLVPKEI--YDLSKKKPIFISAGESHSAAISEKLNLYTWG 421
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GT+G+LGHG S P + + ++CG H+L + VY FG GK G
Sbjct: 422 TGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ---GTVYAFGQGKYG 478
Query: 212 QLGVSK-------DRIRSVSLPQVTIGLHDI------EIVGISANGDRSAALSAEGHLYT 258
+LG+++ R +S +V + ++ E + +A + S L+ G +Y+
Sbjct: 479 KLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYS 538
Query: 259 WG----------RGFNSTSDVNCPQSLPSSL--------------------SFS----QA 284
WG +GF + Q +P L +FS Q
Sbjct: 539 WGYNGKGLLGRQKGFEEHLPIEIGQ-IPGELIGKIPNIDELIQRGDLKQEETFSYEVIQV 597
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-------------------SV 325
A G + + LT GEV + G + +G L+ + ++ R +
Sbjct: 598 ACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSEQM 657
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD-QIHPKVVNL 384
+L K V++ IA G EH ++ + WG + GQLGLG D P ++
Sbjct: 658 SLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIR- 716
Query: 385 GDEFQNRDTQLEVFCGSGFTYAIS 408
+ +++ Q+ + CG ++ A+S
Sbjct: 717 --QIAHKNIQM-IACGDNYSAAVS 737
Score = 92.0 bits (227), Expect = 5e-16, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 138/322 (42%), Gaps = 35/322 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
++ +ACGG H+ A++ + ++F WGR GQLG G V +P I
Sbjct: 670 INYIACGGEHIFAISRMN-----ELFGWGRNDEGQLGLG-FVSDFTAEPTLIRQIAHKNI 723
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGM 187
I+ G N+S VS G LF G+ G+LG G + + N + +ACG
Sbjct: 724 QMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGP 783
Query: 188 RHSLVL--------LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--I 237
H L + +KD + Y +G +GQLG+ +V P+ +H+ +
Sbjct: 784 NHMLAIADYNPDHPIKDGM---CYSWGRNWKGQLGIGSKEDSNV--PK---KIHNAKERF 835
Query: 238 VGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVNCPQSLPS--SLSFSQAALGWNH 290
++ D S L+ +Y WG T DV+ PQ L + A +
Sbjct: 836 KKVACGQDFSIGLTYGNQVYLWGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKF 895
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK--VSNLDGVKVIQIAAGAEHS 348
VL GE+L+ G + ++ +A+ K + D + + I+AG HS
Sbjct: 896 CSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFL-METISAGQNHS 954
Query: 349 AVVTENRAIMTWGWGEHGQLGL 370
A V+ R++ TWG E G+LGL
Sbjct: 955 AAVSVKRSLYTWGHAEGGRLGL 976
Score = 90.9 bits (224), Expect = 1e-15, Method: Composition-based stats.
Identities = 107/455 (23%), Positives = 188/455 (41%), Gaps = 100/455 (21%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ +++WG GT G+LG G E P+L+ + ++CG H LA+T G V
Sbjct: 415 LNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ-----GTV 469
Query: 94 FSWGRGSSGQLG-HGEMVDALYPKP--VTFF------------DGHRYTITHISAGWNHS 138
+++G+G G+LG + + + ++ +P ++F+ D + + +AG+NHS
Sbjct: 470 YAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILA--AAGYNHS 527
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-------------------- 178
++ SG +++ G G LG P+++ +
Sbjct: 528 LCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQE 587
Query: 179 -----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR--IRSV-------- 223
V Q+ACG+ +++ L G +VY FGS GQL KD+ R
Sbjct: 588 ETFSYEVIQVACGVLNTVSLTN---GGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNN 644
Query: 224 --------SLPQVTI----GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
S Q+++ G + I I+ G+ A+S L+ WGR G
Sbjct: 645 NDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGF 704
Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
SD +L ++ A G N+ ++ GE+ + G +G L + +
Sbjct: 705 VSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFL 764
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN------RAIMTWGWGEH--GQLGLGNTC 374
LS L + NL +K +A G H + + + M + WG + GQLG+G+
Sbjct: 765 LSFTL--IQNLAPIK--SVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKE 820
Query: 375 DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
D PK + N + F+ +V CG F+ ++
Sbjct: 821 DSNVPKKIHNAKERFK------KVACGQDFSIGLT 849
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 32/273 (11%)
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN- 179
F H IT ++ G H +++ LF+ G G +G LG G P + + K
Sbjct: 284 FPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHL--IIEKKD 341
Query: 180 ----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ IACG HS+ L + ++ +G G+ G+LG + V +P+ L
Sbjct: 342 YTYFIEGIACGKYHSMCLTRK---KKILTWGQGQGGRLGHGDE--DDVLVPKEIYDLSKK 396
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQSLPSSL------SFSQAALG 287
+ + ISA SAA+S + +LYTWG G ++ + P + + G
Sbjct: 397 KPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCG 456
Query: 288 WNHVLVLTGDGEVLMLGGSHHGML-----------SDPERVSSTRPLSVALEKVSNLDGV 336
H L +TG G V G +G L S PE++S + + V +++ D
Sbjct: 457 AFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYK-VGVEPQEMLVQDKN 515
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ I AAG HS + ++ I +WG+ G LG
Sbjct: 516 EAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLG 548
Score = 61.6 bits (148), Expect = 8e-07, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 20/187 (10%)
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL-----PSSLSF 281
H I ++ A++ + L++WG G F + D+ P+ L +
Sbjct: 287 HTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFI 346
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H + LT ++L G G L + P +++ +L K I I
Sbjct: 347 EGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVP-----KEIYDLSKKKPIFI 401
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
+AG HSA ++E + TWG G +G+LG G + PK++ D+++ + V CG+
Sbjct: 402 SAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYE----IIHVSCGA 457
Query: 402 GFTYAIS 408
T AI+
Sbjct: 458 FHTLAIT 464
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 160/354 (45%), Gaps = 24/354 (6%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG G DGQLG G D L P +++ ++ + CG H A + +V+SWG
Sbjct: 37 TWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEH----QVYSWG 92
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P+PV G + I ++ G +H V+ +G + + G GQ
Sbjct: 93 WGDFGRLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G P + +F +V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTED---GDIYGWGWGRYGNLGLGD 207
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
R V P+ + ++V ++ + +S+ G LYT+G G D
Sbjct: 208 RNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV 265
Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + S SQ + GW H + LT DG++ G + G + + P V +
Sbjct: 266 PHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPE 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV Q+A G H+ TE + + WG G GQLG G D+ P +++
Sbjct: 326 EQ-----KVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIID 374
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 146/322 (45%), Gaps = 23/322 (7%)
Query: 12 GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
G +++I A E+E QV +SWG G G+LG G D +PQ + +
Sbjct: 67 GITSVICGADHTTAYSEDEHQV---YSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LACG +H LA+T + G+V SWGR +GQLG G D+L P+ + F+G ++ I
Sbjct: 124 LACGDSHCLAVT-----MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEG--ISVKMI 176
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG H+ V++ G ++ G G +G LG GD P KVSS + +ACG RH++
Sbjct: 177 AAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTI 236
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ +Y +G K GQLG +P L D IS + AL+
Sbjct: 237 TVSSS---GSLYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALT 291
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
++G LY WG G +D P + P +Q A GW H L T V
Sbjct: 292 SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAW 351
Query: 304 GGSHHGMLSDPERVSSTRPLSV 325
G G L E V P+ +
Sbjct: 352 GRGTSGQLGHGEIVDRNTPVII 373
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 34/353 (9%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V +++ G +H +AL + G + +WGRG GQLGHG+ D L P ++ FD
Sbjct: 15 AVVLVSAGASHSVAL-----LAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP--G 67
Query: 128 ITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
IT + G +H+ + D +++ G G FG+LGHG+ +P V + + Q+ACG
Sbjct: 68 ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACG 127
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H L + + +V +G + GQLG+ ++D + LPQ I + I+A
Sbjct: 128 DSHCLAV---TMAGEVLSWGRNQNGQLGLGTTEDSL----LPQTIQAFEGISVKMIAAGA 180
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
+ +AA++ +G +Y WG G +D P+ + S A GW H + ++
Sbjct: 181 EHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSS 240
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G S +G L + P KV L QI+ G H+ +T +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSSTSQISGGWRHTMALTSDGK 295
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G G+ D P VN F +V CG T A +
Sbjct: 296 LYGWGWNKFGQVGAGDNADHCSPAQVN----FPEEQKVAQVACGWRHTLAFTE 344
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G GQLG G D L P + SS S ++ G H +ALTS GK++
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD-----GKLYG 298
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G+ D P V F + + + ++ GW H+ ++ +F G GT
Sbjct: 299 WGWNKFGQVGAGDNADHCSPAQVNFPEEQK--VAQVACGWRHTLAFTEKKNVFAWGRGTS 356
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLGHG+ ++PV + +
Sbjct: 357 GQLGHGEIVDRNTPVIIDAL 376
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ AL V++ V+ ++AGA HS + + TWG GE GQLG G+ D++ P V+
Sbjct: 1 MDAALSAVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVI 60
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D V CG+ T A S
Sbjct: 61 SGFDA----PGITSVICGADHTTAYSE 83
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 148/322 (45%), Gaps = 27/322 (8%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
+++I A EEEQQV +SWG G G+LG G D +PQ + + +A
Sbjct: 76 TSVICGADHTTAYSEEEQQV---YSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA 132
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H LA+T +GG+V SWGR +GQLG G D+L P+ + F+G + I+A
Sbjct: 133 CGDSHCLAVT-----MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEG--ICVKMIAA 185
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ V++ G L+ G G +G LG GD P KVS + + IACG RH++ +
Sbjct: 186 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITV 245
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ +Y +G K GQLG P L D IS + AL+++
Sbjct: 246 SSSGI---LYTYGWSKYGQLG--HGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSD 300
Query: 254 GHLYTWGRGFNSTSDVNCPQSL----------PSSLSFSQAALGWNHVLVLTGDGEVLML 303
G LY W G+N V S+ P+ +Q A GW H L T V
Sbjct: 301 GKLYGW--GWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAW 358
Query: 304 GGSHHGMLSDPERVSSTRPLSV 325
G G L E V +PL +
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMI 380
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 160/354 (45%), Gaps = 24/354 (6%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G D L P +++ ++ + CG H A + +V+SWG
Sbjct: 44 SWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQ----QVYSWG 99
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P+PV G + I ++ G +H V+ G + + G GQ
Sbjct: 100 WGDFGRLGHGNSSDVFTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQ 157
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G P K+ +F V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 158 LGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 214
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
R V P+ + ++V I+ + +S+ G LYT+G G D
Sbjct: 215 RNDRFV--PEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLF 272
Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + S SQ + GW H + LT DG++ G + G + + V P+ V
Sbjct: 273 PHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPA 332
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV Q+A G H+ TE + + WG G GQLG G D+ P +++
Sbjct: 333 EQ-----KVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMID 381
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 161/352 (45%), Gaps = 34/352 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL G + SWGRG GQLGHG+ D L P ++ FD R I
Sbjct: 23 VVLVSAGASHSVALLE-----GNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPR--I 75
Query: 129 THISAGWNH-SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
T + G +H + + + +++ G G FG+LGHG+ +P V + + Q+ACG
Sbjct: 76 TSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGD 135
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + +G +V +G + GQLG+ ++D + LPQ I + I+A +
Sbjct: 136 SHCLAV---TMGGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFEGICVKMIAAGAE 188
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGD 297
+AA++ +G LY WG G +D P+ SL A GW H + ++
Sbjct: 189 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSS 248
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G S +G L + P KV L QI+ G H+ +T + +
Sbjct: 249 GILYTYGWSKYGQLGHGDFEDHLFP-----HKVEALKDSSTSQISGGWRHTMALTSDGKL 303
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G G++ D P V F +V CG T A +
Sbjct: 304 YGWGWNKFGQVGAGDSVDHCSPVQVM----FPAEQKVAQVACGWRHTLAYTE 351
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G GQLG G D L P + SS S ++ G H +ALTS GK++
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSD-----GKLYG 305
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G+ VD P V F + + ++ GW H+ ++ +F G GT
Sbjct: 306 WGWNKFGQVGAGDSVDHCSPVQVMFPAEQK--VAQVACGWRHTLAYTEKKNVFAWGRGTS 363
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLGHG+ + P+ + +
Sbjct: 364 GQLGHGEIVDRNKPLMIDAI 383
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 183/388 (47%), Gaps = 73/388 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG G+LG G D L P+L+ S +++ ++ACG H A+T + G ++
Sbjct: 330 EIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVT-----LSGDLY 384
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G +++IS G H+ V+ +G LFT G
Sbjct: 385 TWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFG 442
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 443 DGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 502
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 503 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 524
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ VN + F Q A G + + LT G V +G +G L P+ P
Sbjct: 525 -TRVALVNVKPN------FCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQ-ADGKLP 576
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 577 ICVEWK----LSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLV 632
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ +++D + + CG+ FT AI H
Sbjct: 633 ---EALKDKDVK-SIACGTNFTAAICLH 656
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 181/389 (46%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D L PQL+ S +++ +ACG H A+T + G ++
Sbjct: 335 EIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVT-----LSGDLY 389
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ VS +G LFT G
Sbjct: 390 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVSSAGQLFTFG 447
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S Q ACG+ H+ +++ +GN ++
Sbjct: 448 DGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKL 507
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 508 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 529
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + + T G V +G +G L +P+ S
Sbjct: 530 -------TCVSALVEP-NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQ---SDGK 578
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L +E L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 579 LPARVE--GKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLV 636
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 637 E-----ALKDKQVKSIACGTNFTAAICLH 660
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 185/387 (47%), Gaps = 74/387 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++ +V ++ACG H A+T+ G+++
Sbjct: 97 EVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTT-----SGELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LG+G V PK ++ +GH+ + ++S G H+ V+ G LFT G
Sbjct: 152 TWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQ--VAYVSCGTWHTALVTSRGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHG+ S S P +V S +ACG+ H+ +++ + +++
Sbjct: 210 DGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLF 269
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPKLKP----------- 290
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
C SL F + A G + + LT G+VL +G + +G L +P S L
Sbjct: 291 ------TCVASL-IDYDFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPR---SDGKL 340
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+E ++ G V+Q+A G+ H AV+T + TWG G +G+LG G+ D+ K+
Sbjct: 341 PCLIE---DIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDR---KIPT 394
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + + CGS FT AI +H
Sbjct: 395 LVESLRDRAVR-HIACGSNFTSAICQH 420
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 168/351 (47%), Gaps = 33/351 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D L+P ++ DG I
Sbjct: 16 VLLVSAGASHSVALLS-----GNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQ--DI 68
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S+SG +++ G G FG+LGHGD+ P + + + QIACG
Sbjct: 69 ICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGD 128
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + D +QV +G + G+LG+ ++D + LPQ +I I ++A +
Sbjct: 129 SHCLAVTMD---SQVLSWGRNQNGELGLGTAEDSL----LPQKIQIFEEIPIKMVAAGAE 181
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDG 298
S A++ +G+LY WG G +D P+ + + A GW H + ++ G
Sbjct: 182 HSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSG 241
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ G +G L + P KV L + Q++ G HS +T + ++
Sbjct: 242 GLYTNGWGKYGQLGHGDFEDHLVP-----RKVQALSDKFISQVSGGWRHSMALTSSGQLL 296
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
WGW + GQ+G+GN D P VN F + + CG T A++
Sbjct: 297 GWGWNKFGQIGVGNNFDCCSPMQVN----FPHDQKVQMISCGWRHTIAVTE 343
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 165/356 (46%), Gaps = 27/356 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D L P L+ + + CG H +A S G V+S
Sbjct: 35 VCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMA----RSESGRDVYS 90
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG+ D L P P+ G I I+ G +H V+ + + G
Sbjct: 91 WGWGDFGRLGHGDHSDLLIPHPIKALQG--LMIQQIACGDSHCLAVTMDSQVLSWGRNQN 148
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G P K+ F + +A G HS+ + KD GN +YG+G G+ G LG+
Sbjct: 149 GELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKD--GN-LYGWGWGRYGNLGL 205
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYT--WGR----GFNSTSD 268
DR + +VT+ D + + + A G R + +S+ G LYT WG+ G D
Sbjct: 206 G-DRNDRLLPEKVTV---DGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED 261
Query: 269 VNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P+ + S SQ + GW H + LT G++L G + G + P+ V
Sbjct: 262 HLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVN 321
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV I+ G H+ VTE + +WG G +GQLG G T D+ P ++
Sbjct: 322 FPHDQ-----KVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTII 372
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 127/244 (52%), Gaps = 19/244 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +G+LG G D L PQ + + + M+A G H +A+T G ++
Sbjct: 139 QVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKD-----GNLY 193
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT DG + + ++ GW H+ VS SG L+T G G
Sbjct: 194 GWGWGRYGNLGLGDRNDRLLPEKVTV-DGDKMAM--VACGWRHTICVSSSGGLYTNGWGK 250
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H P KV + +K + Q++ G RHS+ L Q+ G+G K GQ+G
Sbjct: 251 YGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSS---GQLLGWGWNKFGQIG 307
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V + S QV HD ++ IS + A++ ++Y+WGRG N T D
Sbjct: 308 VGNN-FDCCSPMQVNF-PHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETID 365
Query: 269 VNCP 272
N P
Sbjct: 366 RNVP 369
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 28/242 (11%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
+ V ++ G HS+ LL GN V +G G+ GQLG + DR+ P L
Sbjct: 14 RRVLLVSAGASHSVALLS---GNVVCSWGRGEDGQLGHGDTDDRL----FPTKLSALDGQ 66
Query: 236 EIVGISANGDRSAALSAEGH-LYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAAL 286
+I+ ++ D + A S G +Y+WG G SD+ P + + L Q A
Sbjct: 67 DIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIAC 126
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H L +T D +VL G + +G L T S+ +K+ + + + +AAGAE
Sbjct: 127 GDSHCLAVTMDSQVLSWGRNQNGELG-----LGTAEDSLLPQKIQIFEEIPIKMVAAGAE 181
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HS +T++ + WGWG +G LGLG+ D++ P+ V + + D V CG T
Sbjct: 182 HSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTV-----DGDKMAMVACGWRHTIC 236
Query: 407 IS 408
+S
Sbjct: 237 VS 238
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
G G GQLG G D L P+ + S +S ++ G H +ALTS G++ WG
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTS-----SGQLLGWGWN 301
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
GQ+G G D P V F H + IS GW H+ V++ +++ G G GQLG
Sbjct: 302 KFGQIGVGNNFDCCSPMQVNF--PHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLG 359
Query: 160 HGDYRSHSSPVKVSSF 175
+G+ + P + +F
Sbjct: 360 NGETIDRNVPTIIEAF 375
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG GQ+G G D SP +N V M++CG H +A+T +V +SWGR
Sbjct: 298 WGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENV-----YSWGR 352
Query: 99 GSSGQLGHGEMVDALYPKPVTFF 121
G++GQLG+GE +D P + F
Sbjct: 353 GANGQLGNGETIDRNVPTIIEAF 375
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 167/355 (47%), Gaps = 27/355 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V S+G G DGQLG G D L P+++ + +S++ACG H A ++ I +S
Sbjct: 26 VCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTI----YS 81
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G I I+ G +H V+ G +++ G
Sbjct: 82 WGWGDFGRLGHGNSSDLFVPHPIKALQG--LEIRQIACGDSHCLAVTADGEVYSWGRNQN 139
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F +V +A G H+ + ++YG+G G+ G LG+
Sbjct: 140 GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDS---GKLYGWGWGRYGNLGL 196
Query: 216 SK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTS 267
DR+ +P V D ++ ++ + A+S G LYT+G G +
Sbjct: 197 GDRGDRMLPAEVPAVG----DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA 252
Query: 268 DVNCPQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D P + + F +Q + GW H + LT G++ G + G + + T P +
Sbjct: 253 DHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLI 312
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
++ +V+Q++ G H+ VT+ + +WG G GQLG G+ D+ PK
Sbjct: 313 SIPGQHQ----RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPK 363
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 166/349 (47%), Gaps = 29/349 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V S+GRG GQLGHG+ D L P+ + + I
Sbjct: 7 VLLVSAGASHTVALLS-----GQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALN--DCEI 59
Query: 129 THISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ++ G +H+ + + +++ G G FG+LGHG+ P + + + QIACG
Sbjct: 60 SLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGD 119
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + D +VY +G + GQLG+ D S+ +P + + + ++A + +
Sbjct: 120 SHCLAVTAD---GEVYSWGRNQNGQLGLG-DTDDSL-VPHKLLAFEGVSVKMLAAGAEHT 174
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
AA++ G LY WG G D P +P+ A GW H + ++ G+
Sbjct: 175 AAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P +V+ L + Q++ G H+ +TE +
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLP-----HQVAALAEFNITQVSGGWRHTVALTEAGKLYG 289
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
WGW + GQ+G G+ D P+++++ + Q ++V CG T A++
Sbjct: 290 WGWNKFGQVGSGDVDDHTSPQLISIPGQHQR---VVQVSCGWRHTVAVT 335
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG +GQLG G D L P L SV MLA G H A+T GK++
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDS-----GKLY 184
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D + P V + + ++ GW H+ VS SG L+T G
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCM--VACGWRHTIAVSQSGKLYTYGWSK 242
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGDY H P +V++ N+ Q++ G RH++ L + ++YG+G K GQ+G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE---AGKLYGWGWNKFGQVG 299
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
S D S ++I +V +S + A++ + ++Y+WGRG
Sbjct: 300 -SGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 125/245 (51%), Gaps = 29/245 (11%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHD 234
+ V ++ G H++ LL G V FG G+ GQLG ++DR+ LP++ L+D
Sbjct: 4 ERKVLLVSAGASHTVALLS---GQVVCSFGRGEDGQLGHGDAEDRL----LPRIIGALND 56
Query: 235 IEIVGISANGDRSAALSAEG-HLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAA 285
EI ++ D + A SA +Y+WG G ++SD+ P + + L Q A
Sbjct: 57 CEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA 116
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H L +T DGEV G + +G L + S P K+ +GV V +AAGA
Sbjct: 117 CGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVP-----HKLLAFEGVSVKMLAAGA 171
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFT 404
EH+A VT++ + WGWG +G LGLG+ D++ P +V +GDE V CG T
Sbjct: 172 EHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-----KMCMVACGWRHT 226
Query: 405 YAISR 409
A+S+
Sbjct: 227 IAVSQ 231
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q K++++G GQLG G D L P + + +++ ++ G H +ALT G
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE-----AG 285
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K++ WG GQ+G G++ D P+ ++ G + +S GW H+ V+D +++ G
Sbjct: 286 KLYGWGWNKFGQVGSGDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSF 175
GT GQLGHGD S+P + +
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQAL 368
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 176/382 (46%), Gaps = 45/382 (11%)
Query: 36 VWSWGAGTDGQLGTGRLH------DELS----PQLLNLSSLSSVSMLACGGAHVLALTSP 85
V ++G DGQLGTG D++S PQ + + ++CG H +ALTS
Sbjct: 8 VTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTS- 66
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
G V+SWG GS GQLGHG++ P+ + FF+ R + +IS G HS V+ G
Sbjct: 67 ----SGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDG 122
Query: 146 CLFTCGDGTFGQLG-HGDYRS--HSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLG 199
L+ G+ +GQLG +Y + S PVK + + +++CG H+ L
Sbjct: 123 TLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF--- 179
Query: 200 NQVYGFGSGKRGQLGV--------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+VY +G G GQLG+ + + S P + + ++V ++ SAA++
Sbjct: 180 GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVT 239
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
+GH+Y WG+ G +SD P+ L + + + G H +V+ G+
Sbjct: 240 EQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAF 299
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L + S TRP V L G VIQ A G H+ VT + G
Sbjct: 300 GRGEYGRLGLGDTKSRTRP-----HLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRP 354
Query: 364 EHGQLGLGNTCDQIHPKVVNLG 385
+HG+LGL + P ++LG
Sbjct: 355 DHGRLGLADMKALGVPTRLDLG 376
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 130/288 (45%), Gaps = 52/288 (18%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIAC 185
I +S G H+ ++ SG +++ G G+ GQLGHGD + + P K++ F + V I+C
Sbjct: 51 IVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISC 110
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD-RIRSVSLP---QVTIGLHDIEIVGIS 241
G HS + KD +Y +G GQLG+ K+ SLP + G IV +S
Sbjct: 111 GGCHSAAVTKD---GTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVS 167
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
G +AAL++ G +Y WGRG LG V + + E L
Sbjct: 168 CGGTHTAALTSFGRVYVWGRG-------------------DSGQLGIGSVWMKDPENESL 208
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
M ++RP + +G KV+Q+A GA HSA VTE + WG
Sbjct: 209 M---------------GASRP-----HLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWG 248
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++G LG+G + DQ PK + D+ L V CG T +++
Sbjct: 249 KEDYGMLGVGQSSDQQIPKRLEYFDDI----PVLRVSCGGWHTVVVAK 292
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 35 KVWSWGAGTDGQLGTG----------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
+V+ WG G GQLG G L P LL + V +ACG H A+T
Sbjct: 181 RVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTE 240
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G V+ WG+ G LG G+ D PK + +FD + +S G H+ V+ S
Sbjct: 241 Q-----GHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFD--DIPVLRVSCGGWHTVVVAKS 293
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G + G G +G+LG GD +S + P V + K V Q ACG H+L + D Y
Sbjct: 294 GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSD---GTAYV 350
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
G G+LG++ ++++ +P + L I + SA G S AL
Sbjct: 351 AGRPDHGRLGLAD--MKALGVP-TRLDLGPIPVRQFSAGGAHSVAL 393
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG G LG G+ D+ P+ L V ++CGG H + + G ++
Sbjct: 244 VYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAK-----SGDCYA 298
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+GRG G+LG G+ P V G T+ + G +H+ FV+ G + G
Sbjct: 299 FGRGEYGRLGLGDTKSRTRPHLVKALKGK--TVIQAACGGSHTLFVTSDGTAYVAGRPDH 356
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
G+LG D ++ P ++ V Q + G HS+ L+
Sbjct: 357 GRLGLADMKALGVPTRL-DLGPIPVRQFSAGGAHSVALM 394
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 169/360 (46%), Gaps = 30/360 (8%)
Query: 12 GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
G +++I A E+E QV +SWG G G+LG G D +PQ + +
Sbjct: 67 GITSVICGADHTTAYSEDELQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 123
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG +H LA+T + G+V SWGR +GQLG G D+L P+ + F+G + I
Sbjct: 124 IACGDSHCLAVT-----MAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEG--VCVKMI 176
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG H+ V++ G L+ G G +G LG GD P KVSS + + +ACG RH++
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTI 236
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ GN +Y +G K GQLG +P L D I IS + AL+
Sbjct: 237 TVSDS--GN-LYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDSTISQISGGWRHTMALT 291
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLML 303
+EG LY WG G + D P + P SQ A GW H L L+ V
Sbjct: 292 SEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSW 351
Query: 304 GGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVV----TENRAIM 358
G G L + E V P+ + AL ++ G K ++ + A +A V +E AI+
Sbjct: 352 GRGTSGQLGNGEIVDRNTPVLIDALS--TDGSGCKKLESSTAAPFAAKVWVSPSERYAIV 409
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 164/356 (46%), Gaps = 28/356 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G D L P +L+ ++ + CG H A + +V+SWG
Sbjct: 37 SWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDEL----QVYSWG 92
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P+PV G + I I+ G +H V+ +G + + G GQ
Sbjct: 93 WGDFGRLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQ 150
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-- 215
LG G P K+ +F V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 151 LGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 207
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
DR+ LP+ + ++V ++ + +S G+LYT+G G D
Sbjct: 208 RNDRL----LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 263
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + + SQ + GW H + LT +G++ G + G + P+ V
Sbjct: 264 LVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF 323
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ K+ Q+A G H+ ++E + + +WG G GQLG G D+ P +++
Sbjct: 324 PEDQ-----KISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLID 374
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 34/357 (9%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
S +V +++ G +H +AL + G + SWGRG GQLGHG+ D L P ++ FD
Sbjct: 11 SPPQTVVLVSAGASHSVAL-----LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDA 65
Query: 124 HRYTITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
IT + G +H+ + D +++ G G FG+LGHG+ +P V + + Q
Sbjct: 66 P--GITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 123
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
IACG H L + + QV +G + GQLG+ ++D + LPQ + + I
Sbjct: 124 IACGDSHCLAV---TMAGQVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFEGVCVKMI 176
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
+A + +AA++ +G LY WG G +D P+ + S A GW H +
Sbjct: 177 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTI 236
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ G + G S +G L + P K+ L + QI+ G H+ +T
Sbjct: 237 TVSDSGNLYTYGWSKYGQLGHGDFEDHLVP-----HKLEALKDSTISQISGGWRHTMALT 291
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+GN D P V+ F +V CG T A+S
Sbjct: 292 SEGKLYGWGWNKFGQVGVGNNDDHCSPVQVH----FPEDQKISQVACGWRHTLALSE 344
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 124/266 (46%), Gaps = 17/266 (6%)
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
D T+ +SAG +HS + L + G G GQLGHGD P +S F +
Sbjct: 10 DSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGIT 69
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
+ CG H+ +D L QVY +G G G+LG V PQ L ++I I+
Sbjct: 70 SVICGADHTTAYSEDEL--QVYSWGWGDFGRLGHGNS--SDVFTPQPVKALQGLKIKQIA 125
Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
A++ G + +WGR G +T D PQ + + + A G H
Sbjct: 126 CGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAA 185
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+T DG++ G +G L +R P EKVS+++G K++ +A G H+ V++
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLP-----EKVSSVEGEKMVLVACGWRHTITVSD 240
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + T+GW ++GQLG G+ D + P
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVP 266
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 167/355 (47%), Gaps = 27/355 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V S+G G DGQLG G D P+++ + +S++ACG H A ++ I +S
Sbjct: 26 VCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTI----YS 81
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G I I+ G +H V+ G +++ G
Sbjct: 82 WGWGDFGRLGHGNSSDLFVPHPIKALQG--LEIRQIACGDSHCLAVTADGEVYSWGRNQN 139
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F +V +A G H+ + G ++YG+G G+ G LG+
Sbjct: 140 GQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD---GGKLYGWGWGRYGNLGL 196
Query: 216 SK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTS 267
DR+ +P V D ++ ++ + A+S G LYT+G G +
Sbjct: 197 GDRGDRMLPAEVPAVG----DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYA 252
Query: 268 DVNCPQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D P + + F +Q + GW H + LT G++ G + G + + T P +
Sbjct: 253 DHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLI 312
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
++ +V+Q++ G H+ VT+ + +WG G GQLG G+ D+ PK
Sbjct: 313 SIPGQHQ----RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPK 363
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 165/349 (47%), Gaps = 29/349 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V S+GRG GQLGHG+ D P+ + + I
Sbjct: 7 VLLVSAGASHTVALLS-----GQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALN--DCEI 59
Query: 129 THISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ++ G +H+ + + +++ G G FG+LGHG+ P + + + QIACG
Sbjct: 60 SLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGD 119
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + D +VY +G + GQLG+ D S+ +P + + + ++A + +
Sbjct: 120 SHCLAVTAD---GEVYSWGRNQNGQLGLG-DTDDSL-VPHKLLAFEGVSVKMLAAGAEHT 174
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
AA++ G LY WG G D P +P+ A GW H + ++ G+
Sbjct: 175 AAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P +V+ L + Q++ G H+ +TE +
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLP-----HQVAALAEFNITQVSGGWRHTVALTEAGKLYG 289
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
WGW + GQ+G G+ D P+++++ + Q ++V CG T A++
Sbjct: 290 WGWNKFGQVGSGDVDDHTSPQLISIPGQHQR---VVQVSCGWRHTVAVT 335
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 120/228 (52%), Gaps = 11/228 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG +GQLG G D L P L SV MLA G H A+T GGK++
Sbjct: 130 EVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD-----GGKLY 184
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D + P V + + ++ GW H+ VS SG L+T G
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCM--VACGWRHTIAVSQSGKLYTYGWSK 242
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGDY H P +V++ N+ Q++ G RH++ L + ++YG+G K GQ+G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE---AGKLYGWGWNKFGQVG 299
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
S D S ++I +V +S + A++ + ++Y+WGRG
Sbjct: 300 -SGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRG 346
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
+ V ++ G H++ LL G V FG G+ GQLG R LP++ L+D E
Sbjct: 4 ERKVLLVSAGASHTVALLS---GQVVCSFGRGEDGQLGHGDAEDRH--LPRIIGALNDCE 58
Query: 237 IVGISANGDRSAALSAEG-HLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALG 287
I ++ D + A SA +Y+WG G ++SD+ P + + L Q A G
Sbjct: 59 ISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACG 118
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+H L +T DGEV G + +G L + S P K+ +GV V +AAGAEH
Sbjct: 119 DSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVP-----HKLLAFEGVSVKMLAAGAEH 173
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+A VT+ + WGWG +G LGLG+ D++ P +V +GDE V CG T A
Sbjct: 174 TAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-----KMCMVACGWRHTIA 228
Query: 407 ISR 409
+S+
Sbjct: 229 VSQ 231
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q K++++G GQLG G D L P + + +++ ++ G H +ALT G
Sbjct: 231 QSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE-----AG 285
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K++ WG GQ+G G++ D P+ ++ G + +S GW H+ V+D +++ G
Sbjct: 286 KLYGWGWNKFGQVGSGDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSF 175
GT GQLGHGD S+P + +
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQAL 368
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 150/320 (46%), Gaps = 23/320 (7%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
+++I A E+E QV +SWG G G+LG G D +PQ + + +A
Sbjct: 68 TSVICGADHTTAYSEDELQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H LA+T + G+V SWGR +GQLG G D+L P+ + F+ + I+A
Sbjct: 125 CGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFE--SVCVKMIAA 177
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ V++ G L+ G G +G LG GD P KVSS + + +ACG RH++ +
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
GN +Y +G K GQLG +P L D I IS + AL++E
Sbjct: 238 SDS--GN-LYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292
Query: 254 GHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
G LY WG G + D + P S P SQ A GW H L L+ V G
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGR 352
Query: 306 SHHGMLSDPERVSSTRPLSV 325
G L + E V P+ +
Sbjct: 353 GTSGQLGNGEIVDRNTPVLI 372
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 167/356 (46%), Gaps = 28/356 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G D L P +L+ +++ + CG H A + +V+SWG
Sbjct: 36 SWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDEL----QVYSWG 91
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P+PV G + I I+ G +H V+ +G + + G GQ
Sbjct: 92 WGDFGRLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-- 215
LG G P K+ +F + V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
DR+ LP+ + ++V ++ + +S G+LYT+G G D
Sbjct: 207 RNDRL----LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P + + + SQ + GW H + LT +G++ G + G + + P V+
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ K+ Q+A G H+ ++E + + +WG G GQLG G D+ P +++
Sbjct: 323 PEDQ-----KISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLID 373
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 163/353 (46%), Gaps = 34/353 (9%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V +++ G +H +AL + G + SWGRG GQLGHG+ D L P ++ FD
Sbjct: 14 TVVLVSAGASHSVAL-----LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAP--A 66
Query: 128 ITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
IT + G +H+ + D +++ G G FG+LGHG+ +P V + + QIACG
Sbjct: 67 ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H L + + +V +G + GQLG+ ++D + LPQ + + I+A
Sbjct: 127 DSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFESVCVKMIAAGA 179
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
+ +AA++ +G LY WG G +D P+ + S A GW H + ++
Sbjct: 180 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSD 239
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G S +G L + P KV L + QI+ G H+ +T
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSTISQISGGWRHTMALTSEGK 294
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+GN D P V+ F +V CG T A+S
Sbjct: 295 LYGWGWNKFGQVGVGNNDDHSSPGQVS----FPEDQKISQVACGWRHTLALSE 343
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 129/274 (47%), Gaps = 18/274 (6%)
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
D T+ +SAG +HS + L + G G GQLGHGD P +S F +
Sbjct: 9 DSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAIT 68
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
+ CG H+ +D L QVY +G G G+LG V PQ L ++I I+
Sbjct: 69 SVICGADHTTAYSEDEL--QVYSWGWGDFGRLGHGNSS--DVFTPQPVKALQGLKIKQIA 124
Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
A++ G + +WGR G +T D PQ + + S+ A G H
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+T DG++ G +G L +R P EKVS+++G K++ +A G H+ V++
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLP-----EKVSSVEGEKMVLVACGWRHTITVSD 239
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 386
+ + T+GW ++GQLG G+ D + P KV L D
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD 273
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G GQLG G D L P + S++S ++ G H +ALTS GK++
Sbjct: 243 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE-----GKLYG 297
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G D P V+F + + I+ ++ GW H+ +S+ +F+ G GT
Sbjct: 298 WGWNKFGQVGVGNNDDHSSPGQVSFPEDQK--ISQVACGWRHTLALSEKKNVFSWGRGTS 355
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLG+G+ ++PV + +
Sbjct: 356 GQLGNGEIVDRNTPVLIDAL 375
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 71/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++S+V +ACG H A+T+ G+++
Sbjct: 97 EVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTT-----GELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
SWG G+ G LGHG V PK V+ +G + ++S G H+ ++ G LFT G
Sbjct: 152 SWGDGTHNVGLLGHGNDVGHWIPKRVSGALEG--LQVAYVSCGTWHTALITSMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FG LGHGD +S S P +V S +ACG+ H+ +
Sbjct: 210 DGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAI------------------ 251
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----ST 266
+E+ I S LSA G L+TWG G
Sbjct: 252 -----------------------VEV--IVTRSSSSVKLSA-GKLFTWGDGDKHRLGHGD 285
Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ + ++L F + A G + + LT G+VL +G + +G L +P S R
Sbjct: 286 KETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPH--SDGRIP 343
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +K+ G +VIQIA G+ H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 344 CLVEDKIV---GEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVE 400
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CG+ FT AI ++
Sbjct: 401 V---LKDRAVRY-IACGANFTAAICQY 423
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 133/344 (38%), Gaps = 87/344 (25%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
G V+ WG GS + D L PKP+ + H+ G H+ V
Sbjct: 35 GDVYVWGEVVCDTSVRTGSDTVISSTGRTDILLPKPLE--SNLVLDVYHVDCGVKHAALV 92
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
+G +FT G+ + G+LGHG P V S NV +ACG H+ + +
Sbjct: 93 MKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTT---GE 149
Query: 202 VYGFGSGKR--GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+Y +G G G LG D + +V+ L +++ +S +A +++ G L+T+
Sbjct: 150 LYSWGDGTHNVGLLGHGNDVGHWIP-KRVSGALEGLQVAYVSCGTWHTALITSMGQLFTF 208
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
GDG +LG HG D + VS
Sbjct: 209 ------------------------------------GDGSFGVLG---HG---DLKSVSY 226
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE---NRA----------IMTWGWGEHG 366
R +V +L G+K I +A G H+A + E R+ + TWG G+
Sbjct: 227 PR-------EVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKH 279
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 408
+LG G+ ++ P V + +F V CG T A++
Sbjct: 280 RLGHGDKETRLKPTCVATLIDHDF------YRVACGHSLTVALT 317
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 187/408 (45%), Gaps = 50/408 (12%)
Query: 28 EEEQQVVKVWSWGAGT---DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
EE + V+ WG DG + T D L P+ L + + V +ACG H +T
Sbjct: 269 EEGDALGDVFLWGESVGSGDGGIKT----DSLLPKALESAVVLDVHHIACGNRHAALVTK 324
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G+VF WG S G+LGHG VD +PK V ++ G HS V+ S
Sbjct: 325 -----QGEVFCWGDESGGRLGHGVDVDVAHPKLVEAL--ATTNTEFVACGEYHSCAVTLS 377
Query: 145 GCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQ 201
G LFT GDGT +G LGHG+ SH +P +V + V +ACG+ H+ ++ Q
Sbjct: 378 GDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTS---AGQ 434
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------- 250
++ FG G G LG R SV+LP+ L ++ V ++ +AA+
Sbjct: 435 LFTFGDGTFGVLGHGDKR--SVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAG 492
Query: 251 SAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
+ G L+TWG G P + + +F Q A G + LT +G V
Sbjct: 493 GSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFT 552
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
+G S +G L D V + L +E L V +IA GA H AV+T + TWG
Sbjct: 553 MGSSLYGQLGD---VRADGKLPGLVE--GRLWEAFVEEIACGAYHVAVLTAKTEVYTWGK 607
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G +G+LG G+ D+ P +V E Q + V CGSGFT AI H
Sbjct: 608 GANGRLGHGDVMDRNTPTLVEALKEKQVKS----VACGSGFTAAICLH 651
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 169/362 (46%), Gaps = 31/362 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +WG GQLG G + D P ++L + ++V+ +A G H LALTS G V
Sbjct: 55 TILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTS-----AGTVL 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR GQLG+G + P V+ G R ++AG +HS ++ +G + GD T
Sbjct: 110 AWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVA--VAAGADHSLALTSAGTILAWGDNT 167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S+PV VS V IA G H+LVL G + +G RGQLG
Sbjct: 168 FGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTS--TGPTLLTWGKNTRGQLG 225
Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
+D +V+LP + + ++ D S L+++ WG G
Sbjct: 226 DGTTTGRDTPVAVTLPP------GVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNG 279
Query: 265 STSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+T+D P +LP+ + A G H LT +G G + G L + S+ P
Sbjct: 280 TTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEP 339
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++V+L + L + ++H+ +T A + WG +G+LG G+T D+ P V
Sbjct: 340 VAVSLPADTRLTAIA----GRDSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAV 395
Query: 383 NL 384
+L
Sbjct: 396 SL 397
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 145/328 (44%), Gaps = 34/328 (10%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++V+ + +WG GQLG+G M+D+ P V+ G + ++ G H ++ +G
Sbjct: 49 TAVVSDTILAWGENDGGQLGNGTMIDSSEPVAVSLPAG--TAVAAVAVGDRHGLALTSAG 106
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ G GQLG+G S S+PV VS +A G HSL L + +
Sbjct: 107 TVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTS---AGTILAW 163
Query: 206 GSGKRGQLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWG 260
G GQLG RS VSLP T + I+A D + L++ G L TWG
Sbjct: 164 GDNTFGQLGDGSTTDRSTPVAVSLPAGTT------VAAIAAGRDHNLVLTSTGPTLLTWG 217
Query: 261 R--------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
+ G + D +LP ++ + A G +H LVLT D L GG+ G L
Sbjct: 218 KNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLG 277
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ S P++VAL G + IAAG HSA +T A WG GQLG G+
Sbjct: 278 NGTTTDSLVPIAVALPT-----GTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGS 332
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
T D P V+L DT+L G
Sbjct: 333 TTDSSEPVAVSL-----PADTRLTAIAG 355
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG + GQLG G D L P + L + + + +A G H ALTS G F+WG
Sbjct: 267 AWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSE-----GAAFAWG 321
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--HSGFVSDSGCLFTCGDGTF 155
GQLG+G D+ P V+ R T AG + H+ ++ +G G
Sbjct: 322 HNGRGQLGNGSTTDSSEPVAVSLPADTRLTAI---AGRDSDHNVTITSAGAALAWGANAN 378
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G+LG G S+PV VS V IA G S+ L
Sbjct: 379 GELGDGSTTDRSTPVAVSLPAGTRVAAIAAGDDQSMAL 416
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 181/382 (47%), Gaps = 45/382 (11%)
Query: 36 VWSWGAGTDGQLGTGRLH------DELS----PQLLNLSSLSSVSMLACGGAHVLALTSP 85
V ++G DGQLGTG D++S P+ L + ++CG H +ALT+
Sbjct: 12 VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTA- 70
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
G V+SWG GS GQLGHG++ P+ + FF+ + ++S G HS V++ G
Sbjct: 71 ----SGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDG 126
Query: 146 CLFTCGDGTFGQLG---HGDYRSHSSPVK---VSSFVNKNVHQIACGMRHSLVLLKDCLG 199
L+ G+ +GQLG + S PVK + +++V +++CG H+ L LG
Sbjct: 127 TLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTN--LG 184
Query: 200 NQVYGFGSGKRGQLGVSKDRIRS--------VSLPQVTIGLHDIEIVGISANGDRSAALS 251
+VY +G G GQLG+ ++ VS P + G + ++V ++ SAA++
Sbjct: 185 -RVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVT 243
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
+GH+Y WG+ G TSD P+ + + + + G H +V+ G+
Sbjct: 244 EQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAF 303
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L + S TRP V L G VIQ A G H+ VT + G
Sbjct: 304 GRGEYGRLGLGDTKSRTRP-----HLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRP 358
Query: 364 EHGQLGLGNTCDQIHPKVVNLG 385
+HG+LG+ + P ++LG
Sbjct: 359 DHGRLGMTDMKPLSVPTRLDLG 380
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 64/333 (19%)
Query: 93 VFSWGRGSSGQLGHG----------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
V ++G GQLG G ++ + +PK + G I +S G H+ ++
Sbjct: 12 VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEE--IVAVSCGSRHTMALT 69
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGN 200
SG +++ G G+ GQLGHGD +S + P K++ F + V ++CG HS + D
Sbjct: 70 ASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTND---G 126
Query: 201 QVYGFGSGKRGQLGVSKD-RIRSVSLP---QVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+Y +G GQLG+ K+ S P + G+ D +V +S G +AAL+ G +
Sbjct: 127 TLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRV 186
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y WGRG D L +G + D
Sbjct: 187 YVWGRG----------------------------------DSGQLGIGSAWLKDTDDNGL 212
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+ +RP V +G KV+Q+A GA HSA VTE + WG ++G LG+G T DQ
Sbjct: 213 LGVSRP-----HLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQ 267
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK V EF + L V CG T +++
Sbjct: 268 QTPKRV----EFFDDIPALRVSCGGWHTMVVAK 296
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 150/349 (42%), Gaps = 41/349 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG G+ GQLG G L PQ + V ++CGG H A+T+ G +
Sbjct: 74 VYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTND-----GTL 128
Query: 94 FSWGRGSSGQLGHGEMVDAL---YPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFT 149
+ WG GQLG + +A +P +G ++ +S G H+ +++ G ++
Sbjct: 129 YMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYV 188
Query: 150 CGDGTFGQLGHGD----------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
G G GQLG G S P V F + V Q+ACG HS + +
Sbjct: 189 WGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQ--- 245
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
VY +G G LGV + + P+ DI + +S G + ++ G Y +
Sbjct: 246 GHVYIWGKEDYGMLGVGQTSDQQT--PKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAF 303
Query: 260 GRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
GRG T P + + + QAA G +H L +T DG + G HG L
Sbjct: 304 GRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRL 363
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT-ENRAIMT 359
++ +PLSV +L + V Q++AG HS +T +R I +
Sbjct: 364 G----MTDMKPLSVPTRL--DLGPIPVRQVSAGGAHSMALTHSSRPIFS 406
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSL--------SSVSMLACGGAHVLALTS 84
+V+ WG G GQLG G L D LL +S V +ACG H A+T
Sbjct: 185 RVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTE 244
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G V+ WG+ G LG G+ D PK V FFD +S G H+ V+ S
Sbjct: 245 Q-----GHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFD--DIPALRVSCGGWHTMVVAKS 297
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G + G G +G+LG GD +S + P V + + V Q ACG H+L + D + Y
Sbjct: 298 GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGI---AYV 354
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
G G+LG++ ++ +S+P + L I + +SA G S AL+
Sbjct: 355 AGRPDHGRLGMTD--MKPLSVP-TRLDLGPIPVRQVSAGGAHSMALT 398
>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1042
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 174/384 (45%), Gaps = 49/384 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D P+ L + V +ACGG H + +T P G++FSWG S G+LGHG D
Sbjct: 285 DAFLPKALESKVVLDVHYIACGGRHAVLVTKP-----GEIFSWGEESGGRLGHGIKADVP 339
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
PK + G I ++ G NH+ V+ SG L+T GDG + G LGHG SH P +
Sbjct: 340 NPKLIDTLAG--MNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKR 397
Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+ +V ++CG H+ + Q++ FG G G LG S ++P+
Sbjct: 398 IGGDMEGIHVSYVSCGPWHTAAVTS---VGQLFTFGDGTFGALGHGDHS--SATVPREVE 452
Query: 231 GLHDIEIVGISANGDRSAA---LSAE------------GHLYTWGRG--FNSTSDVNCPQ 273
L + + +S +AA ++ E G L+TWG G + P+
Sbjct: 453 TLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPR 512
Query: 274 SLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P + + Q A G N L LT G V +G + +G L +P R + P V
Sbjct: 513 LFPECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNP-RATGKVPAIVE- 570
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ G + +IA G+ H AV+T + TWG G +GQLG G+ D+ P VV+
Sbjct: 571 ---GKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDF--- 624
Query: 388 FQNRDTQLE-VFCGSGFTYAISRH 410
RD Q+ V CGS FT I H
Sbjct: 625 --LRDKQVRAVACGSNFTAIICLH 646
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 35/339 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D +P+L++ + ++ ++ACG H A+T G ++
Sbjct: 318 EIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVT-----FSGDLY 372
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+WG G+ G LGHG PK + D ++++S G H+ V+ G LFT GD
Sbjct: 373 TWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEGIHVSYVSCGPWHTAAVTSVGQLFTFGD 431
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------------ 200
GTFG LGHGD+ S + P +V + +++CG+ H+ ++ +
Sbjct: 432 GTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFG 491
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-- 258
+++ +G+G +LG R P+ + L D I ++ + + AL+A G +YT
Sbjct: 492 KLFTWGNGDEYRLGHGDKEPR--LFPECVVALGDENICQVACGHNLTLALTAAGRVYTMG 549
Query: 259 ---WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
+G+ N + P + ++ + A G HV VLT EV G +G L
Sbjct: 550 STSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLG 609
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ +P V L +V +A G+ +A++
Sbjct: 610 HGDNKDRNQPTVVDF-----LRDKQVRAVACGSNFTAII 643
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 193/413 (46%), Gaps = 53/413 (12%)
Query: 27 EEEEQQVVKVWSWGAGT-DG----QLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLA 81
+EE ++W WG G DG +L T D P+ + + V +ACG H
Sbjct: 78 QEEGDVFGELWMWGEGIGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTAL 137
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
+T G+VFSWG S G+LGHG D +P+ + T+ +++ G HS V
Sbjct: 138 VTRQ-----GEVFSWGEESGGRLGHGVDADVAHPQLIDSLASS--TVQYVACGEYHSCAV 190
Query: 142 SDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCL 198
+ SG L+T GDGT FG LGHG+ SH +P +V + V +ACG H++++
Sbjct: 191 TQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTST-- 248
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-------- 250
Q++ FG G G LG DR +S S+P+ L ++ + + +AA+
Sbjct: 249 -GQLFSFGDGTFGVLG-HGDR-KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYS 305
Query: 251 ----SAEGHLYTWGRG-FNSTSDVNCPQSL-PSSLS------FSQAALGWNHVLVLTGDG 298
S G L+TWG G N + Q L P+ ++ F Q A G + + LT G
Sbjct: 306 NAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTG 365
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ +G +G L DP+ L V L + +++ GA H A +T +
Sbjct: 366 HLYTMGSVSYGQLGDPQATGR-------LPGVLRLGRTLIEEVSCGAYHVAALTSKGDVC 418
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFTYAISRH 410
TWG G +G+LG G+ D+ P +V RD Q+ +V CGS FT AI H
Sbjct: 419 TWGKGANGRLGHGDAEDRDVPTLVE-----ALRDKQVKKVSCGSSFTSAICLH 466
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +ALT+ G ++
Sbjct: 314 KLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTT-----GHLY 368
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G S GQLG + L P G R I +S G H ++ G + T G G
Sbjct: 369 TMGSVSYGQLGDPQATGRL---PGVLRLG-RTLIEEVSCGAYHVAALTSKGDVCTWGKGA 424
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+LGHGD P V + +K V +++CG + + CL G G+G
Sbjct: 425 NGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI---CLHKSGPGVGTG 475
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 184/387 (47%), Gaps = 74/387 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++ +V ++ACG H A+T+ G+++
Sbjct: 97 EVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTT-----AGELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LG+G V PK ++ +GH+ + ++S G H+ V+ G LFT G
Sbjct: 152 TWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQ--VAYVSCGTWHTALVTSRGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHG+ S S P +V S +ACG+ H+ +++ + +++
Sbjct: 210 DGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLF 269
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPRLKP----------- 290
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
C SL F + A G + + LT G++L +G + +G L +P R P
Sbjct: 291 ------TCVASL-IDYDFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNP-RSDGKLPC 342
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V ++ G V+Q+A G+ H AV+T + TWG G +G+LG G+ D+ K+
Sbjct: 343 -----LVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDR---KIPT 394
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + + CGS FT AI +H
Sbjct: 395 LVEALRDRGVR-HIACGSNFTSAICQH 420
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 155/335 (46%), Gaps = 62/335 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G DGQLG G +D+ P L++ V +ACG H + L+ G V++
Sbjct: 9 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSED-----GAVYT 63
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG G+LGHG+ P+ V +G R I + G H+ V+D G L+T G G +
Sbjct: 64 WGRGDDGRLGHGDNGWKYVPRIVEALEGQR--IVQATCGSYHTAAVTDKGELYTWGGGMY 121
Query: 156 GQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ H +P V ++ V QIACG RH++VL LG +VY +G + G +
Sbjct: 122 GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTD--LG-KVYTWGDKENGVV 178
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + LP++ L + ++A G +AAL+A G ++TWG G
Sbjct: 179 GHTNADGHQY-LPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEG----------- 226
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
G HGM ER + AL
Sbjct: 227 ----------------------------KFGRLGHGM----ERNQMVPRMVEALM----- 249
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G +V +A G HSA + ++ + TWG GEHGQ+
Sbjct: 250 -GKRVGHVACGGFHSAAILDSGELYTWGGGEHGQV 283
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 56/267 (20%)
Query: 22 PKIEEEEEEQQVVK----------------VWSWGAGTDGQLGTGRLHDELSPQLLN--L 63
P+I E E Q++V+ +++WG G G+LG G +P ++
Sbjct: 83 PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLR 142
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
+ V+ +ACG H + LT GKV++WG +G +GH T DG
Sbjct: 143 DEGARVTQIACGSRHTVVLTDL-----GKVYTWGDKENGVVGH------------TNADG 185
Query: 124 HRY-----------TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
H+Y T+T ++A H+ ++ +G +FT G+G FG+LGHG R+ P V
Sbjct: 186 HQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMV 245
Query: 173 SSFVNKNVHQIACGMRHSLVLLKD--------CLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
+ + K V +ACG HS +L QVY FG+G G+LG +R VS
Sbjct: 246 EALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLG--HGDVRKVS 303
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALS 251
+P + GL + +V +++ + +AAL+
Sbjct: 304 VPTLVAGLVKMHVVKVASYNEHTAALA 330
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 19/250 (7%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G +++ G G GQLG GD PV V + +K V Q+ACG H++VL +D VY
Sbjct: 6 AGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSED---GAVY 62
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G G+LG + + V P++ L IV + +AA++ +G LYTWG G
Sbjct: 63 TWGRGDDGRLGHGDNGWKYV--PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGM 120
Query: 264 NSTSDVNCPQSLPSSL----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
P+ +Q A G H +VLT G+V G +G++
Sbjct: 121 YGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ L LE +L V Q+AA H+A +T I TWG G+ G+LG G
Sbjct: 181 TN-ADGHQYLPRMLE---SLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGME 236
Query: 374 CDQIHPKVVN 383
+Q+ P++V
Sbjct: 237 RNQMVPRMVE 246
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ +WG GE GQLGLG+T DQ P +V D +++ ++V CGSG T +S
Sbjct: 9 VYSWGRGEDGQLGLGDTNDQDRPVLV---DALKSKGV-VQVACGSGHTVVLS 56
>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
Length = 364
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 183/390 (46%), Gaps = 48/390 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVS----MLACGGAHVLALTSPSSVIG 90
++SWGA + GQLG G DE +SP+ +NL V+ +A G H L L
Sbjct: 3 LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDK-----N 57
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+ G S GQLG + D L + G R I IS GW+ S VS+ G F
Sbjct: 58 GFVYCCGWNSKGQLGTSD--DTLKITQIEILKGFR--IVQISCGWDFSAAVSECGKQFVW 113
Query: 151 GDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ ++ QLG + + S ++VS + Q++CG+RHS +L KD + G+
Sbjct: 114 GNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKD---GGLLVAGT 170
Query: 208 GKRGQLGVSK--DRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR--- 261
G +GQLG+ D +S+ +V D+E IV I++ + L +G +Y+WG
Sbjct: 171 GSKGQLGLGDNFDDNNYLSISKVP----DLEDIVSIASGQHHTVVLKEDGTVYSWGENKY 226
Query: 262 ---GFN-STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + + S+ P + + GW H L+ GEV G + +G L
Sbjct: 227 GQLGIDPNISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG----- 281
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ R ++ EK+ L V Q++ G+EH+ VT++ + WGW EHG G G+ D
Sbjct: 282 -AQREVTYKPEKIPGLK--DVTQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDVC 338
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
P + F NR + C +G ++A+
Sbjct: 339 KPTQI-----FANRKVKAAFAC-TGSSFAV 362
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + GQLG R E++ + + L V+ L+ G H LA+T GK+F
Sbjct: 268 EVFTWGRNSYGQLGAQR---EVTYKPEKIPGLKDVTQLSVGSEHNLAVTKD-----GKLF 319
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV 118
WG G G G+ D P +
Sbjct: 320 VWGWNEHGSCGTGDKTDVCKPTQI 343
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 24/358 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V SWG G DGQLG G D +P QL L L +S + CG H + + +V+
Sbjct: 39 VCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIIS-ITCGADHTTSYSESRM----EVY 93
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG G G+LGHG D P+P+ H I I+ G +H V+ G + + G
Sbjct: 94 SWGWGDFGRLGHGNSSDLFTPQPIKAL--HSLKIRQIACGDSHCLAVTMDGEVQSWGRNQ 151
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G P K+ +F ++ +A G H+ + +D ++YG+G G+ G LG
Sbjct: 152 NGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTED---GELYGWGWGRYGNLG 208
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
+ R V P+ ++ +++ ++ + ++S+ G LYT+G G D
Sbjct: 209 LGDRNDRLV--PEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFED 266
Query: 269 VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P + + S + GW H + LT DG + G + G + + + P+ V
Sbjct: 267 HLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQV- 325
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
K + ++QI+ G H+ +TE + + +WG G +GQLG G + D+ PK++ +
Sbjct: 326 --KFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEV 381
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 167/355 (47%), Gaps = 32/355 (9%)
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
+ V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DG
Sbjct: 17 IRQVILISAGASHSVALLS-----GNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDG-- 69
Query: 126 YTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
I I+ G +H+ S+S +++ G G FG+LGHG+ +P + + + + QIA
Sbjct: 70 LDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIA 129
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISA 242
CG H L + D +V +G + GQLG+ ++D + +PQ + I ++A
Sbjct: 130 CGDSHCLAVTMD---GEVQSWGRNQNGQLGLGTTEDSL----VPQKIQAFQGVSIKMVAA 182
Query: 243 NGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVL 294
+ +AA++ +G LY WG G +D P+ SL + A GW H + +
Sbjct: 183 GAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISV 242
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ G + G S +G L + P KV L + I+ G H+ +T +
Sbjct: 243 SSSGGLYTYGWSKYGQLGHGDFEDHLTP-----HKVEALRDSYISMISGGWRHTMALTSD 297
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ WGW + GQ+G+G+ D P V E + + +++ CG T AI+
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAH--SLVQISCGWRHTLAITE 350
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 128/246 (52%), Gaps = 18/246 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + S+ M+A G H A+T G+++
Sbjct: 143 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTED-----GELY 197
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ V+ +G + + ++ GW H+ VS SG L+T G
Sbjct: 198 GWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIM--VACGWRHTISVSSSGGLYTYGWSK 255
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H +P KV + + + I+ G RH++ L D GN +YG+G K GQ+G
Sbjct: 256 YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSD--GN-LYGWGWNKFGQVG 312
Query: 215 VSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
V D I S QV +V IS + A++ ++++WGRG N +
Sbjct: 313 VG-DNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESM 371
Query: 268 DVNCPQ 273
D N P+
Sbjct: 372 DRNLPK 377
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 146/322 (45%), Gaps = 29/322 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++V+SWG G G+LG G D +PQ + + +ACG +H LA+T + G+V
Sbjct: 90 MEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVT-----MDGEV 144
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWGR +GQLG G D+L P+ + F G +I ++AG H+ V++ G L+ G G
Sbjct: 145 QSWGRNQNGQLGLGTTEDSLVPQKIQAFQG--VSIKMVAAGAEHTAAVTEDGELYGWGWG 202
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G LG GD P KVS + +ACG RH++ + +Y +G K GQL
Sbjct: 203 RYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSS---GGLYTYGWSKYGQL 259
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV---- 269
G P L D I IS + AL+++G+LY W G+N V
Sbjct: 260 G--HGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGW--GWNKFGQVGVGD 315
Query: 270 NCPQSLPSSLSFS--------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N P + F Q + GW H L +T V G +G L E +
Sbjct: 316 NIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNL 375
Query: 322 PLSVALEKVSNLDGVKVIQIAA 343
P + +V + DG QI A
Sbjct: 376 PKII---EVLSADGSGGHQIEA 394
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 184/387 (47%), Gaps = 75/387 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G + P+L+ S+ +V ++ACG H A+T+ G ++
Sbjct: 98 EVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTAT-----GDLY 152
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK V+ DG ++ +S G H+ ++ SG L+T G
Sbjct: 153 TWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDG--LPVSTVSCGTWHTALITSSGQLYTFG 210
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYGF 205
DGTFG LGHG+ S S P +V S ++CG+ H+ +++ + +++ +
Sbjct: 211 DGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTW 270
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G G + +LG +GDRS+ L
Sbjct: 271 GDGDKYRLG----------------------------HGDRSSKLK-------------- 288
Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
P +PS +F +AA G + LT G + +G S +G L +P + R
Sbjct: 289 ------PTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPN--NDGRYP 340
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ E+ L G V+++A G+ H AV+T + TWG G +G+LG G+ D+ KV
Sbjct: 341 RLVEEQ---LGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADR---KVPT 394
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + V CGS FT AI +H
Sbjct: 395 LVEALRDRSVK-RVACGSSFTAAICQH 420
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D L P+L++ S +++ ++ACG H A+T + G ++
Sbjct: 332 EIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVT-----LSGDLY 386
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ V+ SG LFT G
Sbjct: 387 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 444
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S ACG+ H+ +++ +GN ++
Sbjct: 445 DGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKL 504
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 505 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 526
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F + A G + + LT G V +G +G L +P+ P
Sbjct: 527 -------TCVAALVDP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLP 577
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + + V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 578 TRVEGKLAKSF----VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLV 633
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT I H
Sbjct: 634 E-----ALKDKQVKSIACGTNFTATICLH 657
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS VS+ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDGV + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ +I A P + QQV+ V + G G+ G+LG G D
Sbjct: 4016 EAGRNVMIPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4070
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4071 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4119
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4120 HGNSDRQRRPRQIEALQGEE--VIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4177
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4178 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4233
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4234 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4293
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P + + L G
Sbjct: 4294 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKN 4348
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4349 IRQISAGRCHSAAWT 4363
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4003 VYLWGAGRHGQLAEAGR--NVMIPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4053
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4054 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4113
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4114 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4170
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4171 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4229 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4286
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P ++ +
Sbjct: 4287 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4343
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA+S +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +VIQ++ G +HSA
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVIQMSCGFKHSA 4151
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4152 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4206
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
V+E+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 181/389 (46%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G+LG G D L P+L++ S ++ ++ACG H A+T + G ++
Sbjct: 324 EVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVT-----LSGDLY 378
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ V+ SG LFT G
Sbjct: 379 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 436
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 437 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 496
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 497 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 518
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + + LT G V +G +G L +P+ P
Sbjct: 519 -------TCVAALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLP 569
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 570 NRVE----GRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLV 625
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 626 E-----ALKDKQVKSIACGTNFTAAICLH 649
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 178/373 (47%), Gaps = 41/373 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 426 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 480
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 481 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 538
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 539 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 594
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 595 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 652
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 653 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 709
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW----------GWGEHGQLGLG 371
+KVS LDGV + QI+AG HS + +R ++ W H + L
Sbjct: 710 KP-KKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLE 768
Query: 372 NTCDQIHPKVVNL 384
CD+I+ +V L
Sbjct: 769 QYCDKINSEVPPL 781
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 158/330 (47%), Gaps = 37/330 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
V + G G+ G+LG G D L L+ +S++ + +CG H +ALT
Sbjct: 4139 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 4190
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+VFSWG G G+LGHG P+ + G + +S G+ HS V+ G L
Sbjct: 4191 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKL 4246
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G+G +G+LG G+ + P +V++ + ++ACG+ H+LV+ D G+ V+ FG
Sbjct: 4247 FTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTD--GSMVWAFGD 4304
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
G G+LG+ +S PQ L I I ++ S AL+ +GH+YT+G+
Sbjct: 4305 GDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 4362
Query: 264 --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ N PQ +P S + A+G H L L+ G+V G + G L
Sbjct: 4363 PEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHV 4422
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
P V++L G V QI+AG HSA
Sbjct: 4423 REP-----TLVTSLQGKSVRQISAGRCHSA 4447
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 164/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + +SP S + CG + + G V
Sbjct: 4090 VFLWGAGRHGQLAEAGR--NAVSPP--PSPSFCQAQQVICGQNCTFVIQA-----NGTVL 4140
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4141 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4200
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4201 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4257
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + +S +G + +G+ G ++
Sbjct: 4258 GLGNTSNKK--LPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4316 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4373
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++V L GV V IA GAEH+ ++ + + WG GQLGLG+T P +V
Sbjct: 4374 ---QQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4429
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 13/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V ++CG H +T+ GK+F
Sbjct: 4193 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-----DGKLF 4247
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
++G G G+LG G + P+ V +G Y I ++ G NH+ VS G + + GDG
Sbjct: 4248 TFGNGDYGRLGLGNTSNKKLPERVAALEG--YQIGEVACGLNHTLVVSTDGSMVWAFGDG 4305
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD VY FG + +
Sbjct: 4306 DYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4360
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + + I+ + + ALSA G +Y WG
Sbjct: 4361 GLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWG 4407
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 430
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 431 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 487
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 488 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 545
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 546 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 605
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 606 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 656
Query: 378 HPKVVN 383
PK++
Sbjct: 657 RPKLIE 662
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 31/276 (11%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F G G GQL R+ SP SF Q+ CG + V+ + V G
Sbjct: 4090 VFLWGAGRHGQLAEAG-RNAVSPPPSPSFCQ--AQQVICGQNCTFVIQAN---GTVLACG 4143
Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
G G+LG + D + +++ G ++V + S AL+ G +++WG G
Sbjct: 4144 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4203
Query: 264 ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ SD Q P + Q + G+ H V+T DG++ G +G L
Sbjct: 4204 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4260
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV-TENRAIMTWGWGEHGQLGLGNT 373
+ P E+V+ L+G ++ ++A G H+ VV T+ + +G G++G+LGLGN+
Sbjct: 4261 NTSNKKLP-----ERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P+ V++ + +V CG+ F+ A+++
Sbjct: 4316 TAKSSPQKVDILCGIGIK----KVACGTQFSVALTK 4347
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 526
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 527 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 576
Query: 406 AISR 409
A+S+
Sbjct: 577 ALSK 580
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4005 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4059
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4060 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4108
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4109 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4166
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4167 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4222
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4223 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4282
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4283 GMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4337
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4338 VRQISAGRCHSAAWT 4352
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3992 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4042
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4043 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4159
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4160 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4218 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4275
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4276 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3986 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4037
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4094
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4095 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4130
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4131 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4167
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4168 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4222
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4223 PQKIDVLCGIGIK----KVACGTQFSVALTK 4249
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4290 GMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4345 VRQISAGRCHSAAWT 4359
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4290 GMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4345 IRQISAGRCHSAAWT 4359
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTT-----EGE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDGV + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ +I P + QQV+ V + G G+ G+LG G D
Sbjct: 4017 EAGRNVMIPAGAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4071
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4072 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4123
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G +FT G+G +G+LG G+ +
Sbjct: 4124 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKL 4181
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4182 PERVTALEGYQIGQVACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4237
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4238 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 4297
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L +T G+V G + G L P + + L G + Q
Sbjct: 4298 IEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKNIRQ 4352
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4353 ISAGRCHSAAWT 4364
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4004 VYLWGAGRHGQLAEAGR--NVMIPA--GAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4054
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4055 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4114
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4115 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKMFTFGNGDYGRL 4171
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4172 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4230 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4287
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
++V L GV + +A GAEH+ +T + WG GQLGLG+T P ++ +
Sbjct: 4288 ---QQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4344
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK+V
Sbjct: 655 RPKLVE 660
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ P+ + + +ACG H LA+ S G V+
Sbjct: 4159 KMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV----STDGSMVW 4214
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 4215 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4272
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P +V + +A G H+L + VY +GS GQLG
Sbjct: 4273 LIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITST---GDVYAWGSNSEGQLG 4329
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ V P + L I ISA SAA +A
Sbjct: 4330 LG--HTNHVREPTLITVLQGKNIRQISAGRCHSAAWTA 4365
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4152
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4153 VVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4207
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 163/334 (48%), Gaps = 26/334 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G + P+ +N S V +A GG H +ALT + GK
Sbjct: 2259 KVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT-----VDGK 2313
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGH ++ P+ + R I I+ G +HS V+ SG L+T G
Sbjct: 2314 VFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKR--IRDIACGSSHSAAVTSSGELYTWGL 2371
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LGHGD + P V + V K V Q+ACG R + L G VY +G G G+
Sbjct: 2372 GEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEG-MVYSWGDGDFGK 2430
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG + S+P L+ ++ I S AL+ G ++TWG+ G +
Sbjct: 2431 LG--RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTD 2488
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
S V PQ A+G H L +T G+V G + HG D + +P
Sbjct: 2489 SHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKKP-- 2546
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAI 357
AL V L+GV++ ++A G+ HS A T + AI
Sbjct: 2547 -AL--VQGLEGVRITRVACGSSHSTAWATTDTAI 2577
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 154/378 (40%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K+++ G G G+LG G +P LL + +A GG H LAL+ + G+
Sbjct: 3234 KLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALS-----VEGE 3288
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG P+ + G + I+ G HS V+ SG L+T G
Sbjct: 3289 VYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKE--VIDIACGGAHSACVTSSGELYTWGK 3346
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G +G+LGHGD P + V +ACG S L C+ + V+ +G G
Sbjct: 3347 GRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTL---CISDDDNVWSWGDGDY 3403
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +PQ L I + + S AL+ G +YTWG+G
Sbjct: 3404 GKLG--RGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKG-------- 3453
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 3454 --------------------------DYHRLGHGSDDH----------VRRP-----RKV 3472
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H ++ + TWG + GQLG G T P++V Q+
Sbjct: 3473 AALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVT---ALQD 3529
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 3530 KKIT-NVACGSAHTVAWS 3546
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 159/366 (43%), Gaps = 37/366 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC-GGAHVLALTSPSSVIGGK 92
KV+ WG QLG R +P L LSS+ ++ C GG+ L + + GK
Sbjct: 2206 TKVFVWGLNDKDQLGGPRGSKIKTPVLNEF--LSSLKVVCCAGGSKSLFVVTAE----GK 2259
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G G++G+LG G + PK V + + +G H+ ++ G +F+ G+
Sbjct: 2260 VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGE 2319
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 2320 GDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTS---SGELYTWGLGEYGR 2376
Query: 213 L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG----F 263
L G S ++R L + +G I++ A G R A L+ EG +Y+WG G
Sbjct: 2377 LGHGDSTTQLRP-KLVKALVGKRVIQV----ACGSRDAQTLTLTDEGMVYSWGDGDFGKL 2431
Query: 264 NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
C S+P ++ Q G L LT G+V G + L
Sbjct: 2432 GRGGSEGC--SVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDS 2489
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+P + L G K+I +A GA H VT+ + WG +HGQ G G+T
Sbjct: 2490 HVRKP-----QVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNK 2544
Query: 378 HPKVVN 383
P +V
Sbjct: 2545 KPALVQ 2550
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L I+IVG G+++ A++A+G LY
Sbjct: 3183 IYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVG----GEQTLFAVTADGKLYAT 3238
Query: 260 GRG------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G G
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G +VI IA G HSA VT + + TWG G +G+LG
Sbjct: 3299 KLGHGNRTQCDRP-----RVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLG 3353
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+ + ++ ++V CGSG
Sbjct: 3354 HGDSEDQLRPKMADALKGYR----VIDVACGSG 3382
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 30/313 (9%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF-VSDS 144
S I KVF WG QLG P F + AG + S F V+
Sbjct: 2201 SREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCC---AGGSKSLFVVTAE 2257
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQV 202
G ++ CG+GT G+LG G ++ P +V+ V ++A G RH++ L D +V
Sbjct: 2258 GKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVD---GKV 2314
Query: 203 YGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ +G G G+LG +S+ + P++ L I I+ SAA+++ G LYTWG
Sbjct: 2315 FSWGEGDDGKLGHLSR---MNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGL 2371
Query: 262 GF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHGM 310
G +ST+ + P+ + + + Q A G L LT +G V G G
Sbjct: 2372 GEYGRLGHGDSTTQLR-PKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGK 2430
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L + P V L+G VIQI GA+ S +T+ + TWG G++ +LG
Sbjct: 2431 LGRGGSEGCSVP-----HNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH 2485
Query: 371 GNTCDQIHPKVVN 383
G P+V
Sbjct: 2486 GTDSHVRKPQVAE 2498
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 111 DALYPKPVTFFDGHRYTITHISAGWN--HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
D L PK V+ ++ HI+ G N + V+D+G LF+ G+G +G+LG G
Sbjct: 4 DQLTPKLVSGLKEQKFV--HIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKL 61
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLK 195
P V ++ CG + S++L K
Sbjct: 62 PKLVDKLQGQHAVIACCGNQFSVILTK 88
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3997 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4051
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4052 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4100
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4101 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4158
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4159 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4214
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4215 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4274
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4275 GMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4329
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4330 VRQISAGRCHSAAWT 4344
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3984 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4034
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4151
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4152 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4210 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4267
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4268 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4323
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3978 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4029
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4086
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4122
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4123 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4159
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4160 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4214
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4215 PQKIDVLCGIGIK----KVACGTQFSVALTK 4241
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 164/360 (45%), Gaps = 28/360 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V +WG GQLG G ++ + P + L + V+ A G AH LA+TS G V
Sbjct: 63 AVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTS-----AGTV 117
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WGR + GQLG G ++ P V G T+T ++AG+NHS ++ +G +F GD
Sbjct: 118 LAWGRNAVGQLGDGTTINRSTPVDVRLPPG--TTVTAVAAGFNHSLALTSAGTVFAWGDN 175
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLG G + S+PV VS + +A G HSL L V+ +G GQL
Sbjct: 176 STGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTS---AGTVFAWGDNSTGQL 232
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIV-GISANGDRSAALSAEGHLYTWGRGF--------N 264
G D R+ V +GL IV I+ G S A+++ G+ WG F N
Sbjct: 233 G---DGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN 289
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
D + LP + + A G H L LT G VL G ++ G L D P S
Sbjct: 290 INRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGS 349
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V+L GV + +AAG +T ++ WG GQLG G T + P +L
Sbjct: 350 VSLPP-----GVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTPVAASL 404
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQLG G + + + L ++V+ +A G H LALTS G V SWG
Sbjct: 275 AWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSV-----GTVLSWG 329
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ GQLG G D P V+ G TIT ++AG ++ +G + G GQ
Sbjct: 330 SNNWGQLGDGTARDRNTPGSVSLPPG--VTITAVAAGDLFGLALTSAGTVLAWGGNIVGQ 387
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
LG G +PV S + IA G HSL L+
Sbjct: 388 LGDGTTTVRRTPVAASLPTATTITAIATGSGHSLALVA 425
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4004 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4058
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4059 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4107
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4108 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4165
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4166 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4221
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4222 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4281
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4282 GMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4336
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4337 VRQISAGRCHSAAWT 4351
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3991 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4041
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4042 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4158
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4159 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4217 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4274
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4275 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4330
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3985 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4036
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4093
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4094 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4129
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4130 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4166
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4167 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4221
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4222 PQKIDVLCGIGIK----KVACGTQFSVALTK 4248
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 162/329 (49%), Gaps = 32/329 (9%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
G G+ G+LG G ++ P+ + L + +S H LAL G V+SWG
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAE-----TGVVYSWGD 458
Query: 99 GSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG P+ +T F G TI +I AG+ HS V+D G L+T G+G G+
Sbjct: 459 GDYGKLGHGNCATHKQPERITGPFLGK--TIKYIHAGYRHSAAVTDDGKLYTWGEGDHGR 516
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LGHGD + P +V+ V +ACG H+LV+ KD G V+ FGSG+ G+LG +
Sbjct: 517 LGHGDSNARYVPTQVAGLA--EVGSVACGSSHTLVVSKD--GKTVWSFGSGEHGKLGTGE 572
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCP 272
+ V PQV L + I + A S AL+ G +YTWG G ++ + VN P
Sbjct: 573 --LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSADAIVNLP 630
Query: 273 QSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEK 329
+ + + G NH L LT + EV G + G S TRPL K
Sbjct: 631 MYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPITRPL-----K 685
Query: 330 VSNLDGVKVIQIAAGAEHS----AVVTEN 354
V L+GV + QI+AG HS ++ TEN
Sbjct: 686 VIGLEGVSIRQISAGTSHSMAWTSMSTEN 714
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 161/358 (44%), Gaps = 28/358 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K + WG+ GQL + Q+ S S + CG + S G V
Sbjct: 3328 KAYMWGSDRHGQLAELGYSASVPVQV---ESFSIARKIICGQNCTFVIQS-----DGTVL 3379
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 3380 ACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDG 3439
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FG+LGHG+ P ++ + + V Q+ACG +HS V+ D +++ FG+G G+L
Sbjct: 3440 DFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSD---GKLFTFGNGDFGKL 3496
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWGRG------FNST 266
G+ + + LP+ + L I ++ + +A +S +G ++T+G G
Sbjct: 3497 GLGS--VANKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYA 3554
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ PQ + + +L + G + L LT DG+V + G S + +P
Sbjct: 3555 TMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKP-- 3612
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +++L + +A G EH +T ++ WG GQLGL + HP+++
Sbjct: 3613 ---QIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEII 3667
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 149/331 (45%), Gaps = 39/331 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-----VSMLACG---GAHVLALTSPSS 87
V + G G+ G+LG G D L +LS +SS ++ LA H LAL
Sbjct: 3378 VLACGEGSYGRLGQGNSDD-----LHSLSVISSLQGFVITDLATSVGSDGHSLALAE--- 3429
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+VFSWG G G+LGHG P+ + + + ++ G+ HS V+ G L
Sbjct: 3430 --SGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQ--VVQVACGFKHSAVVTSDGKL 3485
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G+G FG+LG G + P +V + + Q+ACG+ H+ + D G V+ FG
Sbjct: 3486 FTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACVSTD--GMTVWTFGE 3543
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-------WG 260
G G+LG+ ++ LPQ + ++ I + + L+ +G ++ W
Sbjct: 3544 GDYGKLGLGYATMK--LLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWH 3601
Query: 261 RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
F + V PQ + S S A+G HVL LT G+VL G + G L P
Sbjct: 3602 SLFRERA-VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSL 3660
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
P E ++ L + QI+ G HSA
Sbjct: 3661 VRHP-----EIITELSDKGIRQISTGRTHSA 3686
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 110/270 (40%), Gaps = 63/270 (23%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V +ACG H +TS GK+F
Sbjct: 3432 EVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTS-----DGKLF 3486
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGDG 153
++G G G+LG G + + P+ V +G+R I ++ G NH+ VS G ++T G+G
Sbjct: 3487 TFGNGDFGKLGLGSVANKKLPERVMALEGYR--IGQVACGLNHTACVSTDGMTVWTFGEG 3544
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---------------------HSL- 191
+G+LG G P KV + N + ++ CG HSL
Sbjct: 3545 DYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLF 3604
Query: 192 -----------------------------VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
+ L C +V G+G GQLG+ +
Sbjct: 3605 RERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTC--GKVLGWGMTGEGQLGLP--HVSL 3660
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSA 252
V P++ L D I IS SAA SA
Sbjct: 3661 VRHPEIITELSDKGIRQISTGRTHSAAWSA 3690
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 16/232 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G + P ++ L+ V +ACG +H L ++ G V+
Sbjct: 505 KLYTWGEGDHGRLGHGDSNARYVPT--QVAGLAEVGSVACGSSHTLVVSKD----GKTVW 558
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G G G+LG GE+ P+ V G TI + AG S ++ +G ++T G G
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEALQG--LTIQKVCAGTWFSMALTTAGEVYTWGSGA 616
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G D + P+ V + I+ G H L L + ++V+ +G+ GQ G
Sbjct: 617 ILGKGSADAIVN-LPMYVEDLAQYRIVDISAGDNHCLALTDE---HEVFAWGTNSMGQCG 672
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA---LSAEGHLYTWGRGF 263
++ P IGL + I ISA S A +S E H T + F
Sbjct: 673 -QGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTSMSTENHHMTKHKPF 723
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 126/327 (38%), Gaps = 83/327 (25%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+ WG SS QL G L P F + + AG + + G + CG
Sbjct: 350 VYVWGSNSSHQLAEGNQEKILMPVKSKMFT----QVQQVEAGQYCTFAIHWDGSVSACGK 405
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G++G+LG G+ + S P + +L DC+ ++ S +G
Sbjct: 406 GSYGRLGLGESSNQSLPKR---------------------ILLDCVVKKL----SSSKGS 440
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVNC 271
G + AL+ G +Y+WG G + NC
Sbjct: 441 DG-------------------------------HTLALAETGVVYSWGDGDYGKLGHGNC 469
Query: 272 -----PQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
P+ + + G+ H +T DG++ G HG L + + P
Sbjct: 470 ATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPT 529
Query: 324 SVA-LEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLGNTCDQIHPKV 381
VA L +V + +A G+ H+ VV+++ + + ++G GEHG+LG G P+V
Sbjct: 530 QVAGLAEVGS--------VACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQV 581
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAIS 408
V + Q Q +V G+ F+ A++
Sbjct: 582 V---EALQGLTIQ-KVCAGTWFSMALT 604
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 102/270 (37%), Gaps = 62/270 (22%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
V + ++ G + QL G+ PVK F V Q+ G + + D
Sbjct: 344 VYEKSDVYVWGSNSSHQLAEGNQEKILMPVKSKMFTQ--VQQVEAGQYCTFAIHWD---G 398
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTW 259
V G G G+LG+ + + SLP+ + ++ + S D + AL+ G +Y+W
Sbjct: 399 SVSACGKGSYGRLGLGESS--NQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSW 456
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G DG+ LG + PER+
Sbjct: 457 G------------------------------------DGDYGKLGHGNCATHKQPERI-- 478
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
T P G + I AG HSA VT++ + TWG G+HG+LG G++ + P
Sbjct: 479 TGPFL----------GKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVP 528
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V E + V CGS T +S+
Sbjct: 529 TQVAGLAEVGS------VACGSSHTLVVSK 552
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4005 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4059
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4060 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4108
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4109 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4166
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4167 KKLPERVTALEGYQIGQVACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4222
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4223 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4282
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4283 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4337
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4338 VRQISAGRCHSAAWT 4352
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3992 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4042
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4043 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4159
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4160 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4218 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4275
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4276 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3986 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4037
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4094
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4095 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4130
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4131 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4167
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4168 KLP-----ERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSS 4222
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4223 PQKIDVLCGIGIK----KVACGTQFSVALTK 4249
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 165/375 (44%), Gaps = 64/375 (17%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4066 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4114
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4115 HGNSDRQRRPX-------QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4167
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4168 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4223
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4224 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4283
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4284 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4338
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4339 VRQISAGRCHSAAWT 4353
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 35/359 (9%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPXQ-----GEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4160
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4161 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4219 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4276
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4277 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4332
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 26/271 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++ G G GQL R+ P SF Q+ CG + V+ + V G
Sbjct: 3998 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 4051
Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
G G+LG + D + +++ G ++V + S AL+ G +++WG G
Sbjct: 4052 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111
Query: 264 ---NSTSDVNCPQSLPSS-LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ SD Q P Q + G+ H V+T DG++ G +G L +
Sbjct: 4112 KLGHGNSDR---QRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4168
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4169 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4223
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4224 PQKIDVLCGIGIK----KVACGTQFSVALTK 4250
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4292
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G + Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNIRQ 4347
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4348 ISAGRCHSAAWT 4359
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 476
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 534
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 535 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 590
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 591 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 648
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 649 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 705
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 706 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 164/372 (44%), Gaps = 64/372 (17%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3550 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3604
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 3605 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 3656
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 3657 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 3714
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 3715 PERV-----------ACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 3759
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 3760 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 3819
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G V Q
Sbjct: 3820 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 3874
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 3875 ISAGRCHSAAWT 3886
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 163/354 (46%), Gaps = 29/354 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3537 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3587
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 3588 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3647
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 3648 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 3704
Query: 214 GVSKDRIRSVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
G+ + LP+ V GL+ + +SA+G A +G G G NST+ + P
Sbjct: 3705 GLGNTSNK--KLPERVACGLN--HTLAVSADGSMVWAF-GDGDYGKLGLG-NSTAK-SSP 3757
Query: 273 QSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
Q + + + A G + LT DG V G L + + RP ++V
Sbjct: 3758 QKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-----QQV 3812
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 3813 PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 3866
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 426
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 427 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 483
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 484 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 541
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 542 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 601
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 602 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 652
Query: 378 HPKVVN 383
PK++
Sbjct: 653 RPKLIE 658
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 3631 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 3685
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
VVT + + T+G G++G+LGLGNT ++ P+ V G
Sbjct: 3686 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVACG 3721
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 522
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 523 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 572
Query: 406 AISR 409
A+S+
Sbjct: 573 ALSK 576
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 163/333 (48%), Gaps = 30/333 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G L ++ Q+ NLSS + + GG H +ALT I G
Sbjct: 2474 KVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALT-----IEG 2528
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
K+FSWG G G+LGHG ++ +PK + F + +S G +HS + SG L+T G
Sbjct: 2529 KLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSS--CVRDMSCGSSHSAAILSSGELYTWG 2586
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGK 209
G +G+LGHGD +H P KV SF + V IACG R +L L D V+ +G G
Sbjct: 2587 LGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDD---GTVWSWGDGD 2643
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
G+LG + S+P L + ++ S ALS G ++TWG+ G
Sbjct: 2644 FGKLG--RGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGH 2701
Query: 264 NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ + V PQ + A+G H L +T G+V G + HG + + R
Sbjct: 2702 GNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRR 2761
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
P + V+ L+G K+ ++A G+ HS E+
Sbjct: 2762 P-----QLVNGLEGQKITRVACGSSHSIAWAES 2789
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 10/225 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G DG+LG G + P+++ V ++CGG+H +T ++++
Sbjct: 3462 VYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQ-----NHELYT 3516
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G G+LGHG+ D L PK V G+R +G + ++D C+++ GDG +
Sbjct: 3517 WGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDY 3576
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G P+KV S + V ++ CG + S+ L + VY +G G +LG
Sbjct: 3577 GKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTR---SGAVYTWGKGDYYRLGH 3633
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
D V P+ L +++ I+ A + G +YTWG
Sbjct: 3634 GVD--DHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWG 3676
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 13/239 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG+G G+LG G P L+ + V ++CG H A+TS G+++
Sbjct: 37 EVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE-----GELY 91
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGRG+ G+LGHG D L P V+ GH +G H+ +D G +++ GDG
Sbjct: 92 TWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGD 151
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G +P + V ++ CG + SL L +D V+ +G G+ +LG
Sbjct: 152 YGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRD---GSVWTWGKGEGFRLG 208
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-STSDVNC 271
++D +R L + G H +V +S AL+ G +Y WGR D++C
Sbjct: 209 HGTEDHVRHPKLVEALDGKH---VVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDC 264
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 137/341 (40%), Gaps = 68/341 (19%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H +AL++ G V+SWG G G+LGHG P+ + G + IS G
Sbjct: 3449 GGKHAMALSA-----DGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGK--GVIDISCG 3501
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+HS ++ + L+T G G +G+LGHGD P V + V +ACG + L
Sbjct: 3502 GSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTL- 3560
Query: 195 KDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
CL + V+ +G G G+LG + +P L + + + S AL+
Sbjct: 3561 --CLTDDDCVWSWGDGDYGKLG--RGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTR 3616
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+ G+ LG +
Sbjct: 3617 SGAVYTWGK------------------------------------GDYYRLGHGVDDHVR 3640
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P+RV++ L G KVI IA G+ H T+ + TWG + GQLG G
Sbjct: 3641 RPKRVAA-------------LQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGT 3687
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLP 413
T P++V Q + V CGS T A S C P
Sbjct: 3688 TNAIARPRLVT---ALQGKKIS-RVACGSAHTIAWST-CKP 3723
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 125/284 (44%), Gaps = 29/284 (10%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H LALT G+V+SWG G G+LGHG+ P VT G + + IS G
Sbjct: 26 GKHFLALTRE-----GEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQ--VIRISCGS 78
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVL 193
HS V+ G L+T G G +G+LGHG PV VS ++ +ACG H+L
Sbjct: 79 THSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAA 138
Query: 194 LKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
D V+ +G G G+LG D ++ P+ L + + + S AL+
Sbjct: 139 ADD---GTVWSWGDGDYGKLGRGGSDGCKN---PKSIERLQGLGVCKVYCGAQFSLALTR 192
Query: 253 EGHLYTWGRGF-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLG 304
+G ++TWG+G + T D L +L ++G H L LT GEV G
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWG 252
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VS L ++ IA G S
Sbjct: 253 RNDQGQLGDID--CQIRPEPTL---VSGLASKGIVGIACGPAQS 291
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + V LPQ L I V I A++AEG +Y G
Sbjct: 3356 IYGWGHNHRGQLGSLEGA--KVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 3413
Query: 262 GF---------NSTSDVNCPQSLPSSLSFSQAA-LGWNHVLVLTGDGEVLMLGGSHHGML 311
G ++ + + +SL + A G H + L+ DG+V G G L
Sbjct: 3414 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKL 3473
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R S RP + L G VI I+ G HSA +T+N + TWG G +G+LG G
Sbjct: 3474 GHGNRNSCDRP-----RVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHG 3528
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PKVV E + ++V CGSG
Sbjct: 3529 DSEDQLLPKVV----EALRGNRVIDVACGSG 3555
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G +P+ + V + CG LALT G V++
Sbjct: 144 VWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR-----DGSVWT 198
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG +PK V DG + +S G H ++D+G ++ G
Sbjct: 199 WGKGEGFRLGHGTEDHVRHPKLVEALDGKH--VVDVSVGSIHCLALTDAGEVYCWGRNDQ 256
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG D + P VS +K + IACG S
Sbjct: 257 GQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSF 292
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G G+LG G D+L P+++ + V +ACG A L LT
Sbjct: 3513 ELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDC----- 3567
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG G P V G ++ + G S ++ SG ++T G
Sbjct: 3568 VWSWGDGDYGKLGRGGSDGCKIPMKVESLIG--LGVSKVECGSQFSVALTRSGAVYTWGK 3625
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G + +LGHG P +V++ K V IA G H + +VY +G GQ
Sbjct: 3626 GDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDT---GEVYTWGDNDEGQ 3682
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
LG +++ P++ L +I ++ + A S
Sbjct: 3683 LG--DGTTNAIARPRLVTALQGKKISRVACGSAHTIAWS 3719
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 28/265 (10%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+TH H ++ G +++ G G G+LGHGD P V+ K V +I+CG
Sbjct: 21 VTHTDG--KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGS 78
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
HS + + ++Y +G G G+L G S+D++ +P + GL I+ ++
Sbjct: 79 THSAAVTSE---GELYTWGRGNYGRLGHGSSEDQL----VPVLVSGLRGHHIIDVACGSG 131
Query: 246 RSAALSA--EGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
+ L+A +G +++WG G + P+S+ L + G L LT
Sbjct: 132 DAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALT 191
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
DG V G L P + V LDG V+ ++ G+ H +T+
Sbjct: 192 RDGSVWTWGKGEGFRLGHGTEDHVRHP-----KLVEALDGKHVVDVSVGSIHCLALTDAG 246
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPK 380
+ WG + GQ LG+ QI P+
Sbjct: 247 EVYCWGRNDQGQ--LGDIDCQIRPE 269
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
+H L L ++ +VY +GSG G+LG R P + GL +++ IS S
Sbjct: 27 KHFLALTRE---GEVYSWGSGDGGKLGHGDTSPREE--PTLVTGLAGKQVIRISCGSTHS 81
Query: 248 AALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWN--HVLVLTG 296
AA+++EG LYTWGRG S+ D P L S L A G H L
Sbjct: 82 AAVTSEGELYTWGRGNYGRLGHGSSEDQLVP-VLVSGLRGHHIIDVACGSGDAHTLAAAD 140
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG V G +G L P S+ L G+ V ++ GA+ S +T + +
Sbjct: 141 DGTVWSWGDGDYGKLGRGGSDGCKNPKSI-----ERLQGLGVCKVYCGAQFSLALTRDGS 195
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ TWG GE +LG G HPK+V D
Sbjct: 196 VWTWGKGEGFRLGHGTEDHVRHPKLVEALD 225
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H L LT +GEV G G L + P V+ L G +VI+I+ G+ HS
Sbjct: 27 KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEP-----TLVTGLAGKQVIRISCGSTHS 81
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYA 406
A VT + TWG G +G+LG G++ DQ+ P +V+ G ++V CGSG +
Sbjct: 82 AAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHI------IDVACGSGDAHT 135
Query: 407 IS 408
++
Sbjct: 136 LA 137
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ +S +ACG AH +A ++ V G++
Sbjct: 3671 EVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWSTCKPVNAGRL 3729
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4233 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4292
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 4293 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4347
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4348 ISAGRCHSAAWT 4359
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 4290 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4345 VRQISAGRCHSAAWT 4359
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4283 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ V L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4147
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4202
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4015 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4069
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4070 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4118
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4119 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4176
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4177 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4232
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4233 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLA 4292
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4293 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4347
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4348 VRQISAGRCHSAAWT 4362
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 164/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4002 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4052
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4053 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4169
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4170 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4228 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQ 4287
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ L L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4288 IPL-----LAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4341
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3996 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4047
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4104
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4105 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4140
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4141 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4178 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4232
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4233 PQKIDVLCGIGIK----KVACGTQFSVALTK 4259
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 182/388 (46%), Gaps = 75/388 (19%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G+LG G P+L+ S+ +V +ACG H A+T+ G +
Sbjct: 280 AEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITAT-----GDL 334
Query: 94 FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ +G LGHG V PK V+ +G ++ +S G H+ ++ SG L+T
Sbjct: 335 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEG--LQVSAVSCGTWHTALITSSGKLYTF 392
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYG 204
GDGTFG LGHG+ + S P +V S ++CG+ H+ +++ + +++
Sbjct: 393 GDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFT 452
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GDRS+ L
Sbjct: 453 WGDGDKYRLG----------------------------HGDRSSKLK------------- 471
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P +PS +F +A G + LT G + G S +G L +P + R
Sbjct: 472 -------PTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPN--NDGRY 522
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ EK L G V+++A GA H AV+T++ + TWG G +G+LG G+ D+ P V
Sbjct: 523 PRLVEEK---LGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFV 579
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGSGFT AI +H
Sbjct: 580 ---EALRDRSVK-RIACGSGFTAAICQH 603
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V++WG G +G+LG G + D +P + SV +ACG A+ SV G
Sbjct: 553 EVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSG 608
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4066 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4114
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4115 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4172
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4228
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4229 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4288
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V + L G
Sbjct: 4289 GVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4343
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4344 IRQISAGRCHSAAWT 4358
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V +
Sbjct: 4282 ---QQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK+V
Sbjct: 655 RPKLVE 660
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4146
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4201
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4290 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4345 VRQISAGRCHSAAWT 4359
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDGV + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQVV V + G G+ G+LG G D
Sbjct: 4011 EAGRNVMVPVAAPSFSQA---QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4066 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4114
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4115 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4172
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H++ + D G+ V+ FG G G+LG+ +S
Sbjct: 4173 KKLPERVTALEGYQIGQVACGLNHTVAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4228
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P S
Sbjct: 4229 PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLS 4288
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L+ G+V G + G L P + + L G
Sbjct: 4289 GVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKN 4343
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4344 IRQISAGRCHSAAWT 4358
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 166/360 (46%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P + S S + CG + + G V
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVP--VAAPSFSQAQQVVCGQNCTFVIQA-----NGTVL 4048
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4165
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4224 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
++V L GV + IA GAEH+ ++ + WG GQLGLG+T P ++ +
Sbjct: 4282 ---QQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4338
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4146
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4147 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTVAVS 4201
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 476
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 477 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 534
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 535 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 590
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 591 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 648
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 649 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 705
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 706 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 167/385 (43%), Gaps = 69/385 (17%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4014 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4068
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4069 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4117
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4118 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4175
Query: 166 HSSPVKVSSFVNKNV----------HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+
Sbjct: 4176 KKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGL 4233
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
+S PQ L I I ++ S AL+ +GH+YT+G+ +
Sbjct: 4234 GNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4291
Query: 270 NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
N PQ +P + + A+G H L L G+V G + G L P V +
Sbjct: 4292 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVT 352
L G V QI+AG HSA T
Sbjct: 4352 -----LQGKNVRQISAGRCHSAAWT 4371
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 40/370 (10%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4001 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4051
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4052 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4111
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4112 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4168
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEI----------VGISANGDRSAALSAEGHLY------ 257
G+ + LP+ L +I + ++ + + A+SA+G +
Sbjct: 4169 GLGNTSNK--KLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDG 4226
Query: 258 TWGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ G +++ + PQ + + + A G + LT DG V G L +
Sbjct: 4227 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG 4286
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+ RP +++ L GV + +A GAEH+ + + WG GQLGLG+T
Sbjct: 4287 RARNHNRP-----QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTN 4341
Query: 375 DQIHPKVVNL 384
P +V +
Sbjct: 4342 HVREPTLVTV 4351
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 426
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 427 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 483
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 484 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 541
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 542 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 601
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 602 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 652
Query: 378 HPKVVN 383
PK++
Sbjct: 653 RPKLIE 658
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4149
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV------NLGDEFQNRDTQLEVFCGSGF 403
VVT + + T+G G++G+LGLGNT ++ P+ V +G N L+V CG
Sbjct: 4150 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNH 4209
Query: 404 TYAIS 408
T A+S
Sbjct: 4210 TLAVS 4214
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 522
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 523 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 572
Query: 406 AISR 409
A+S+
Sbjct: 573 ALSK 576
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4067 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4118
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4119 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4232
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4233 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4292
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G V Q
Sbjct: 4293 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4347
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4348 ISAGRCHSAAWT 4359
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4283 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ V L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4147
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4202
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4231
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 4291
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4346
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4347 ISAGRCHSAAWT 4358
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++V L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4282 ---QQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3992 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4043
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4100
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4136
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4137 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4173
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4174 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4228
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ V++ + +V CG+ F+ A+++
Sbjct: 4229 PQKVDVLCGIGIK----KVACGTQFSVALTK 4255
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4290 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4345 VRQISAGRCHSAAWT 4359
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3949 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4003
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4004 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4052
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4053 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4110
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4111 KKLPERVTALEGYQIGQVACGLNHTLAVSVD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4166
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4167 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4226
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4227 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4281
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4282 VRQISAGRCHSAAWT 4296
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3936 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3986
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 3987 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4046
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4047 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4103
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4104 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4162 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4219
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4220 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4275
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3930 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 3981
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4038
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4039 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4074
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4075 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4111
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4112 KLP-----ERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSS 4166
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4167 PQKIDVLCGIGIK----KVACGTQFSVALTK 4193
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSS--PQK 4231
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 4291
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 4292 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4346
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4347 ISAGRCHSAAWT 4358
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4282 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3992 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4043
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4100
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4136
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4137 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4173
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4174 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSS 4228
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ V++ + +V CG+ F+ A+++
Sbjct: 4229 PQKVDVLCGIGIK----KVACGTQFSVALTK 4255
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 178/373 (47%), Gaps = 41/373 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW----------GWGEHGQLGLG 371
+KVS LDG+ + QI+AG HS + +R ++ W H + L
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLE 766
Query: 372 NTCDQIHPKVVNL 384
CD+I+ ++ L
Sbjct: 767 RYCDKINSEIPPL 779
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4001 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4055
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4056 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4104
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4105 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4162
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4163 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4218
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4219 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4278
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 4279 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4333
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4334 VRQISAGRCHSAAWT 4348
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3988 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4038
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4039 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4098
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4099 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4155
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4156 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4214 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4271
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4272 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4328
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4136
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4137 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4191
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3979 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4033
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4034 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4082
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4083 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4140
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4141 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4196
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4197 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4256
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V + L G
Sbjct: 4257 GVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4311
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4312 IRQISAGRCHSAAWT 4326
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 166/360 (46%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3966 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4016
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4017 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4076
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4077 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4133
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4134 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4192 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4249
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V +
Sbjct: 4250 ---QQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4114
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4115 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4169
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDGV + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQVV V + G G+ G+LG G D
Sbjct: 3485 EAGRNVMVPVAAPSFSQA---QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3539
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 3540 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 3588
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 3589 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 3646
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H++ + D G+ V+ FG G G+LG+ +S
Sbjct: 3647 KKLPERVTALEGYQIGQVACGLNHTVAVSMD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 3702
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P S
Sbjct: 3703 PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLS 3762
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L+ G+V G + G L P + + L G
Sbjct: 3763 GVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV-----LQGKN 3817
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 3818 IRQISAGRCHSAAWT 3832
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 166/360 (46%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P + S S + CG + + G V
Sbjct: 3472 VYLWGAGRHGQLAEAGR--NVMVP--VAAPSFSQAQQVVCGQNCTFVIQA-----NGTVL 3522
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 3523 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3582
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 3583 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 3639
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 3640 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 3698 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 3755
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
++V L GV + IA GAEH+ ++ + WG GQLGLG+T P ++ +
Sbjct: 3756 ---QQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 3812
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 3566 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 3620
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 3621 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTVAVS 3675
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4021 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4075
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4076 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4127
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4128 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4185
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4186 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4241
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4242 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4301
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G V Q
Sbjct: 4302 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4356
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4357 ISAGRCHSAAWT 4368
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4008 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4058
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4059 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4175
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4176 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4234 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4291
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4292 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ V L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4156
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4157 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3975 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4029
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4030 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4081
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4082 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4139
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4140 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4195
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4196 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 4255
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 4256 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 4310
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4311 ISAGRCHSAAWT 4322
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3962 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4012
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4013 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4072
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4073 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4129
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4130 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4188 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4245
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4246 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4301
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3956 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4007
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4064
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4065 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4100
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4101 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4137
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4138 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4192
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4193 PQKIDVLCGIGIK----KVACGTQFSVALTK 4219
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 172/387 (44%), Gaps = 75/387 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG G G+LG D SP++++ S V +ACG H ALT G V+
Sbjct: 324 EVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTD-----SGDVY 378
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+ S L + + + +I+ I+ G H+ VS G LFT GDGT
Sbjct: 379 TWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGT 438
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FG LGHG+Y S SSP +V S V +ACG H+ +
Sbjct: 439 FGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAI--------------------- 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN 270
I + +R ++ G L+TWG +VN
Sbjct: 478 -------------------------IEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVN 512
Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ +P+ +S F Q + G L LT G+V +G + +G L +P + +
Sbjct: 513 --KLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPH----VKDRA 566
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V +E + + VK+I + G+ H AV+T + ++ TWG GE+G+LGLG+T ++ P V
Sbjct: 567 VVVEGMLKQEYVKMI--SCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEA 624
Query: 385 GDEFQNRDTQLE-VFCGSGFTYAISRH 410
RD Q++ + CG FT AI H
Sbjct: 625 L-----RDRQVDTITCGPSFTVAICLH 646
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDGV + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ +I A P + QQV+ V + G G+ G+LG G D
Sbjct: 3941 EAGRNVMIPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3995
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 3996 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4044
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4045 HGNSDRQRRPRQIEALQGEE--VIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4102
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4103 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4158
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4159 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4218
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P + + L G
Sbjct: 4219 GVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITI-----LQGKN 4273
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4274 IRQISAGRCHSAAWT 4288
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3928 VYLWGAGRHGQLAEAGR--NVMIPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3978
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 3979 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4038
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4039 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4095
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4096 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4154 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4211
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + IA GAEH+ + + WG GQLGLG+T P ++ +
Sbjct: 4212 ---QQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITI 4268
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +VIQ++ G +HSA
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVIQMSCGFKHSA 4076
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4077 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4131
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 167/361 (46%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P + + ++V +ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTA-----NGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P+ + Y I IS G HS +SD G + + GD
Sbjct: 61 VYACGSNDHSQLGH----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH D P V V+K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV+ + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ P L + +L A G + LT +G V G +G L + P
Sbjct: 234 DETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ + +R + +G G GQLG +T + P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + ++ G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG QLGH P+ + + + QI+CG RHSL L QV +G
Sbjct: 64 CGSNDHSQLGHD--LPTKRPLLIPELQDYVIIQISCGSRHSLALSD---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + D+ + LP+V L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGHATDK-EIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS D+ N P L + L AA+ G NH +++ G V G ++ G L + +
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P ++ L + V +A G E S +T + T G G +GQLG G + +++
Sbjct: 238 RAYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG D L L++L + + +ACGG H ++ G
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 119/274 (43%), Gaps = 51/274 (18%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q+ACG RH+L L + +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTAN---GKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS QLG R + +P+ L D I+ IS S ALS G + +WG
Sbjct: 64 CGSNDHSQLGHDLPTKRPLLIPE----LQDYVIIQISCGSRHSLALSDWGQVLSWG---- 115
Query: 265 STSDVNCPQ----------SLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
D +C Q LP S + Q A G NH L LT GE+ G + +
Sbjct: 116 ---DNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 173 GQLGVNSPKDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + V GDEF
Sbjct: 228 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4010 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4064
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4065 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4113
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4114 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4227
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4228 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4287
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 4288 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4342
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4343 VRQISAGRCHSAAWT 4357
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4145
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/398 (32%), Positives = 192/398 (48%), Gaps = 43/398 (10%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VWS DG + + + +D L+P+ L + + V +ACG HV +T G+V
Sbjct: 232 EVWSDAVFPDGSMSSVPIKNDVLTPKPLESNVVLDVQQIACGVRHVALVTR-----QGEV 286
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG S G+LGHG D P+ V F + ++ G H+ V+ SG L+T GDG
Sbjct: 287 FTWGEESGGRLGHGFETDFSCPRLVEFL--AVTNVDFVACGEYHTCAVTTSGDLYTWGDG 344
Query: 154 T--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
T G LG G SH P +VS V IACG HS + + +++ FG G
Sbjct: 345 TRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSN---GKLFTFGDGAF 401
Query: 211 GQLGVSKDRIRSVSLP---QVTIGLHDIEIV-------GISANGDRSAALSAEGHLYTWG 260
G LG DR S+S P Q+ GL I++ I +S A + L+TWG
Sbjct: 402 GVLG-HGDR-ESLSFPKEVQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWG 459
Query: 261 RGFNS-----TSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G + + D + SSL +F Q A G + LT G V +GG+ HG L
Sbjct: 460 DGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQLG 519
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+P +S + ++ +L G V +++ GA H AV+T + TWG G +G+LG G+
Sbjct: 520 NP---ASDGKMPTLVQ--DSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGD 574
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
T D+ P +V + ++R + + CGS FT +I H
Sbjct: 575 TEDRRTPTLV---EALKDRHVK-NISCGSNFTTSICIH 608
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + +ACG +ALT+ G VF
Sbjct: 454 KLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTT-----SGHVF 508
Query: 95 SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G + GQLG+ G+M + V F + +S G +H ++ L+T
Sbjct: 509 TMGGTAHGQLGNPASDGKMPTLVQDSLVGEF------VEEVSCGAHHVAVLTSRSELYTW 562
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
G G G+LGHGD +P V + +++V I+CG + + C+ V G
Sbjct: 563 GKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSI---CIHKWVSGADQSVC 619
Query: 207 SGKRGQLGVSKDR 219
SG R G ++ R
Sbjct: 620 SGCRQAFGFTRKR 632
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4007 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4061
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4062 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4113
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4114 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4171
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4172 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4227
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4228 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4287
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G V Q
Sbjct: 4288 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4342
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4343 ISAGRCHSAAWT 4354
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3994 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4044
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4045 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4105 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4161
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4162 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4220 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4277
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4278 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4142
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4143 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4197
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4011 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4065
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4066 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4117
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4118 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4231
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4232 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVV 4291
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G + Q
Sbjct: 4292 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4346
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4347 ISAGRCHSAAWT 4358
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3998 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4048
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4165
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4166 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4224 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4281
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
++V L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4282 ---QQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4146
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4147 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4201
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 166/339 (48%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L ++ VS H LA TS G+
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSE-----GE 473
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS VS+ G L+T G
Sbjct: 474 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 531
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 532 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 587
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 588 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 645
Query: 268 DVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 646 ATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 702
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV LDGV + QI+AG HS + +R ++ W
Sbjct: 703 KP-KKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 168/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ L+ P + QQVV V + G G+ G+LG G D
Sbjct: 3997 EAGRNILVPTLAPSFSQA---QQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDD-- 4051
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4052 ---LHVLTVISALQGFVVTQMVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4103
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LF+ G+G +G+LG G+ +
Sbjct: 4104 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKL 4161
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +VS+ V Q+ACG+ H+L + D G V+ FG G G+LG+ +S PQ
Sbjct: 4162 PERVSALEGHQVGQVACGLNHTLAVSAD--GMTVWAFGDGDYGKLGLGNSTAKSS--PQK 4217
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +G++YT+G+ + N PQ +P + +
Sbjct: 4218 VDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVF 4277
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L+ G+V G + G L P +S L G + Q
Sbjct: 4278 IEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREP-----TLISALQGKNIQQ 4332
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4333 ISAGRCHSAAWT 4344
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 165/360 (45%), Gaps = 32/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + L P L S S + CG + + G V
Sbjct: 3984 VFLWGAGRHGQLAEAGR--NILVPTLA--PSFSQAQQVVCGQNCTFVIQA-----NGTVS 4034
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDG 4094
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFSFGNGDYGRL 4151
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNS 265
G+ + LP+ L ++ ++ + + A+SA+G + W G +
Sbjct: 4152 GLGNTSNKK--LPERVSALEGHQVGQVACGLNHTLAVSADG-MTVWAFGDGDYGKLGLGN 4208
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
++ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4209 STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRP- 4267
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++V L GV + +A GAEH+ ++ + WG GQLGLG+T P +++
Sbjct: 4268 ----QQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIS 4323
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 41/323 (12%)
Query: 84 SPSSVIGGK---------VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
SP S+ G+ V+ WG SS QL G L PK F + I AG
Sbjct: 351 SPDSIQAGEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAG 406
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSL 191
+ +S G + CG G++G+LG GD + S+ K++ ++ + +++ H+L
Sbjct: 407 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTL 466
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAAL 250
+ +V+ +G G G+LG + P++ G L +V +SA SAA+
Sbjct: 467 AFTSE---GEVFSWGDGDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAV 521
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLML 303
S +G LYTWG G ++ N P + + + + G +H + L+ DG V
Sbjct: 522 SEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSF 581
Query: 304 GGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
GG +G L D RV + V L G+ + ++ AG++ S +T + WG
Sbjct: 582 GGGDNGKLGHGDTNRVYKPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 634
Query: 362 WGEHGQLGLGNT-CDQIHPKVVN 383
G LG G++ + PK++
Sbjct: 635 CG--ACLGCGSSEATALRPKLIE 655
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK VF WG G GQL G +V L P +F + + G N + +
Sbjct: 3978 LGGKCDVFLWGAGRHGQLAEAGRNILVPTLAP---SFSQAQQ-----VVCGQNCTFVIQA 4029
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTE---SG 4086
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4122
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4123 -----------------------QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNK 4159
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+VS L+G +V Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4160 KLP-----ERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSS 4214
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ V++ + +V CG+ F+ A+++
Sbjct: 4215 PQKVDVLCGIGIK----KVACGTQFSVALTK 4241
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 464 HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 519
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
V+E+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 520 AVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 569
Query: 406 AISR 409
A+S+
Sbjct: 570 ALSK 573
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4009 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4063
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4064 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4115
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4173
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4174 PERVTALEGYQIGQVACGLNHTLAVSSD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4229
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4230 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4289
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G V Q
Sbjct: 4290 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 4344
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4345 ISAGRCHSAAWT 4356
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3996 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4046
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4047 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4106
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4107 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4163
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S++G + +G+ G ++
Sbjct: 4164 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4222 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4279
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4280 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4336
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4144
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4145 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4199
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 168/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ P + QQV+ V + G G+ G+LG G D
Sbjct: 4010 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4064
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4065 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4116
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4117 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4230
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4231 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4290
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G + Q
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4345
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4346 ISAGRCHSAAWT 4357
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4145
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 168/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ P + QQV+ V + G G+ G+LG G D
Sbjct: 4010 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4064
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4065 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4116
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4117 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4230
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4231 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4290
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G + Q
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4345
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4346 ISAGRCHSAAWT 4357
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4145
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V + NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDII--NVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ +I A P QQVV V + G G+ G+LG G D
Sbjct: 4015 EAGRNVMIPAAAPSFSPA---QQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4069
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4070 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4118
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4119 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4176
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H++ + D G+ V+ FG G G+LG+ +S
Sbjct: 4177 KKLPERVTALEGYQIGQVACGLNHTVAVSTD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4232
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4233 PQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLA 4292
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L+ G+V G + G L P V + L G
Sbjct: 4293 GVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4347
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4348 VRQISAGRCHSAAWT 4362
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 164/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4002 VYLWGAGRHGQLAEAGR--NVMIPA--AAPSFSPAQQVVCGQNCTFVIQA-----NGTVL 4052
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4053 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4169
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+S +G + +G+ G ++
Sbjct: 4170 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4228 TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQ 4287
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L L GV + IA GAEH+ ++ + WG GQLGLG+T P +V +
Sbjct: 4288 VPL-----LAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4342
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 141/306 (46%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK + F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + ++ + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4150
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4151 VVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTVAVS 4205
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHP----KVVNLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P ++N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
Length = 1207
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 155/321 (48%), Gaps = 26/321 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++S G+ GQLG + + SP L+ L ++CG H LAL + G+V
Sbjct: 120 IYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLAL-----MRDGEV 174
Query: 94 FSWGRGSSGQLGHG----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
+SWG +GQ G G V PK V F D R I I +G HSGFV + G LF
Sbjct: 175 YSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFM 234
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG G GQLG+ Y+ SP +S K + ++ACG H++VL ++ ++Y GS
Sbjct: 235 CGKGDQGQLGNMSYQDELSPFYISKIPEK-IQEVACGDDHTVVLTRNG---EIYTMGSNS 290
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
RGQLG R ++P + L+ I + I A G SA+LS + LY WG G + +
Sbjct: 291 RGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRA-GQFSASLSVDNQLYLWGCG--TFGEF 347
Query: 270 NCPQSLPS--SLSFSQAALGWNHVL-VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P + S +L + LG + L VLT G V G + G L + + + P
Sbjct: 348 FTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDSIQRSTP---- 403
Query: 327 LEKVSNLDGVKVIQIAAGAEH 347
+V LDG +V QI G ++
Sbjct: 404 -HRVEALDGKRVTQITCGRDY 423
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 146/310 (47%), Gaps = 38/310 (12%)
Query: 83 TSPSSVIGG---KVFSWGRGSSGQLGHGEMVDA-----LYPKPVTFFDGHRYTITHISAG 134
++ S V GG +VFSWG GQLG G+ + + + P+ F + IT +S G
Sbjct: 52 SNKSQVQGGDYTEVFSWGSDKFGQLGLGKQISSQKQFHMVPR----FCSYNIPITQVSCG 107
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
+HS F++ S +++ G GQLG D + SSPV V VN QI+CG H+L
Sbjct: 108 TSHSVFITSSQLIYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLA 167
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS--LPQVTIGLHDIE---IVGISANGDRS 247
L++D +VY +GS + GQ G +V P++ + D + I I + S
Sbjct: 168 LMRDG---EVYSWGSNENGQCGSGASPFHTVVQWAPKI-VKFDDYQRPFIKQIDSGAFHS 223
Query: 248 AALSAEGHLYTWGRGFN------STSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDG 298
+ G L+ G+G S D P +P + + A G +H +VLT +G
Sbjct: 224 GFVDEIGRLFMCGKGDQGQLGNMSYQDELSPFYISKIPEKI--QEVACGDDHTVVLTRNG 281
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
E+ +G + G L S + V L++ L+ +++ +I AG + SA ++ + +
Sbjct: 282 EIYTMGSNSRGQLGTGPSSSRGSNVPVLLQE---LNFIRMTRIRAG-QFSASLSVDNQLY 337
Query: 359 TWGWGEHGQL 368
WG G G+
Sbjct: 338 LWGCGTFGEF 347
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 26/246 (10%)
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNV--HQIACGMRHSLVLLKDCLG 199
D +F+ G FGQLG G S V F + N+ Q++CG HS+ + L
Sbjct: 61 DYTEVFSWGSDKFGQLGLGKQISSQKQFHMVPRFCSYNIPITQVSCGTSHSVFITSSQL- 119
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+Y GS +GQLG+ + S P + L + + + IS + + AL +G +Y+W
Sbjct: 120 --IYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLALMRDGEVYSW 177
Query: 260 GRGFN------STSDVNCPQSLPSSLSF--------SQAALGWNHVLVLTGDGEVLMLGG 305
G N ++ Q P + F Q G H + G + M G
Sbjct: 178 GSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGK 237
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L + P ++ K+ K+ ++A G +H+ V+T N I T G
Sbjct: 238 GDQGQLGNMSYQDELSPFYIS--KIPE----KIQEVACGDDHTVVLTRNGEIYTMGSNSR 291
Query: 366 GQLGLG 371
GQLG G
Sbjct: 292 GQLGTG 297
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 21/220 (9%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIG 90
++ +++ G G GQLG DELSP +S + + +ACG H + LT
Sbjct: 228 EIGRLFMCGKGDQGQLGNMSYQDELSP--FYISKIPEKIQEVACGDDHTVVLTR-----N 280
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++ G S GQLG G PV + + +T I AG S +S L+
Sbjct: 281 GEIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQ-FSASLSVDNQLYLW 339
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GTFG+ +P +V S N + G L +L VY +G
Sbjct: 340 GCGTFGEFF--------TPHRVKSVQNLELADFQLGKSGFLTVL--TRQGSVYTWGINDM 389
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
GQLG+ +D I+ S P L + I+ D AL
Sbjct: 390 GQLGL-RDSIQR-STPHRVEALDGKRVTQITCGRDYVIAL 427
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 166/339 (48%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDGV + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 155/336 (46%), Gaps = 43/336 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML----------ACGG-AHVLALTS 84
V + G G+ G+LG G D L L+ +S L +CG H +ALT
Sbjct: 4029 VLACGEGSYGRLGQGNSDD--------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4080
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G+VFSWG G G+LGHG P+ + G + +S G+ HS V+
Sbjct: 4081 -----SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTAD 4133
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G LFT G+G +G+LG G+ + P +V++ ++ Q+ACG+ H+L + D G+ V+
Sbjct: 4134 GKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSAD--GSLVWA 4191
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
FG G G+LG+ +S PQ L I I ++ S AL+ +GH+YT+G+
Sbjct: 4192 FGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4249
Query: 264 -----NSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+ N PQ +P L A+G H L L+ GEV G + G L
Sbjct: 4250 IGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHT 4309
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P V+ L G + QI+AG HSA T
Sbjct: 4310 NHVREP-----TLVTALQGKNIRQISAGRCHSAAWT 4340
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3980 VFLWGAGRHGQLAEAGR--NVMIPS--GAGSFSQAQQVICGQNCTFVIQA-----NGTVL 4030
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4031 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4090
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4091 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4147
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L + I ++ + + A+SA+G L +G+ G ++
Sbjct: 4148 GLGNTSNKK--LPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS 4205
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4206 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4263
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G+ + IA GAEH+ ++ + + WG GQLGLG+T P +V
Sbjct: 4264 ---QLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVT 4319
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V ++CG H +T+ GK+F
Sbjct: 4083 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA-----DGKLF 4137
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-FTCGDG 153
++G G G+LG G + P+ VT +G I ++ G NH+ VS G L + GDG
Sbjct: 4138 TFGNGDYGRLGLGNTSNKKLPERVTALEG--LHIGQVACGLNHTLAVSADGSLVWAFGDG 4195
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD VY FG + +
Sbjct: 4196 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 4250
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ+ L I I I+ + + ALSA G +Y WG
Sbjct: 4251 GLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWG 4297
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ V L G+ ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 71/328 (21%)
Query: 89 IGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+GGK VF WG G GQL + + P F + I G N + + +G
Sbjct: 3974 LGGKCDVFLWGAGRHGQLAEAGR-NVMIPSGAGSFSQAQQVI----CGQNCTFVIQANGT 4028
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQVY 203
+ CG+G++G+LG G+ +S+ V Q+ +CG HS+ L + +V+
Sbjct: 4029 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SGEVF 4085
Query: 204 GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+G G G+LG + DR R P+ L E+V
Sbjct: 4086 SWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV------------------------ 4118
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
Q + G+ H V+T DG++ G +G L + P
Sbjct: 4119 --------------------QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLP 4158
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
E+V+ L+G+ + Q+A G H+ AV + + +G G++G+LGLGN+ + P+
Sbjct: 4159 -----ERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQK 4213
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V++ + +V CG+ F+ A+++
Sbjct: 4214 VDVLCGIGIK----KVACGTQFSVALTK 4237
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ P+ + + +ACG H LA+ S G V+
Sbjct: 4135 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV----SADGSLVW 4190
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ V G I ++ G S ++ G ++T G
Sbjct: 4191 AFGDGDYGKLGLGNSTAKSSPQKVDVLCG--IGIKKVACGTQFSVALTKDGHVYTFGQDR 4248
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
L G R+H+ P V + + IA G H+L L +VY +GS GQLG
Sbjct: 4249 LIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLAL---SASGEVYAWGSNSEGQLG 4305
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ V P + L I ISA SAA +A
Sbjct: 4306 LG--HTNHVREPTLVTALQGKNIRQISAGRCHSAAWTA 4341
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GTLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 166/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ P + QQV+ V + G G+ G+LG G D
Sbjct: 4010 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4064
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4065 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4113
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4114 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4171
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4172 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4227
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4228 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4287
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 4288 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4342
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4343 IRQISAGRCHSAAWT 4357
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4145
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4200
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 168/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ P + QQV+ V + G G+ G+LG G D
Sbjct: 4010 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4064
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4065 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4116
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4117 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4230
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4231 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4290
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G + Q
Sbjct: 4291 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4345
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4346 ISAGRCHSAAWT 4357
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3997 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4047
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4165 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4223 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4281 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4145
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4146 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4200
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 180/389 (46%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D + P+L++ S +++ ++ACG H A+T + G ++
Sbjct: 330 EIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVT-----LSGDLY 384
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 385 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 442
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S Q ACG+ H+ +++ +GN ++
Sbjct: 443 DGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKL 502
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 503 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 524
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + + T G V +G +G L +P P
Sbjct: 525 -------TCVAALVEP-NFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNP-LADGKLP 575
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 576 TRVE----GKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 631
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 632 E-----ALKDKQVKSIACGTSFTAAICLH 655
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 174/388 (44%), Gaps = 73/388 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +SWG G+LG G D P+L+ +V ++ACG H A+TS G ++
Sbjct: 328 EAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTS-----SGDLY 382
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G SSG LGH PK V +G R ++H+S G H+ ++ +G LFT G
Sbjct: 383 TWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLR--VSHVSCGPWHTALITSAGRLFTFG 440
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD +P +V +F ++ACG+ H+
Sbjct: 441 DGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAA------------------- 481
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDV 269
+V + + D + + G L+TWG G
Sbjct: 482 -------------------------VVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD 516
Query: 270 NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
N P+ P + SFS+ A + + LT G V +G + +G L P + P+
Sbjct: 517 NKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCP-LANGMSPI 575
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V V + V +I+ G+ H AV+T + TWG GE+GQLG G+ ++ P +V+
Sbjct: 576 CVEDYLVDST----VEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVD 631
Query: 384 LGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+ RD Q++ + CGS F+ AI H
Sbjct: 632 IL-----RDKQVKRIVCGSNFSAAICVH 654
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 124/319 (38%), Gaps = 78/319 (24%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +DA PK + + +IS G H+ V+ G F+ G+ G+LGHG
Sbjct: 291 GTRIDANTPKSLE--SSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV 348
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVS 224
S P + +F NV IACG HS + +Y +G G + G LG + S
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTS---SGDLYTWGDGAKSSGLLGHRSE--ASHW 403
Query: 225 LPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQ 283
+P+ GL + + + +S +A +++ G L+T+G G
Sbjct: 404 IPKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDG--------------------- 442
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
G HG R + +V +G+K +++A
Sbjct: 443 ------------------TFGALGHG----------DRSGCITPREVETFNGLKTLKVAC 474
Query: 344 GAEHSAVVTE-------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQ 389
G H+A V E + + TWG G+ G+LG G+ ++ P+ + L D+
Sbjct: 475 GVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDK-- 532
Query: 390 NRDTQLEVFCGSGFTYAIS 408
+ EV C T A++
Sbjct: 533 ---SFSEVACSYAMTVALT 548
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 166/357 (46%), Gaps = 35/357 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL--SPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++ WG ++GQLG G E +P+LL NL S+V ++CG H L G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCK-----DGT 55
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G GQLG + + P + +TIT ++ G H+ VSD G +F GD
Sbjct: 56 VYTCGSNEFGQLGQ----EKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGD 111
Query: 153 GTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
++GQ+G G + + P + +V QIACG HS+ L + ++ +G
Sbjct: 112 NSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMAL---TISGHLFCWGDNS 168
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG+ K S+S P + L+ + + ISA G S ALS+ G L+ WG+ G
Sbjct: 169 SGQLGIGKTH-SSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGV 227
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ T+D P L S S + G H VLT DG V G G L
Sbjct: 228 HDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG--NTCD 375
P KV L G V QIA G H+ A+V + + T+G G GQLGLG N C+
Sbjct: 288 P-----RKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCN 339
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 23/302 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
+F WG+ S GQLG GE P + ++ + +S GWNH+ F+ G ++TC
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTP-RLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTC 59
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG +SH++P V + + ++ CG H++ + L V+ +G
Sbjct: 60 GSNEFGQLGQE--KSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGL---VFAWGDNSY 114
Query: 211 GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQ+G+ SK + + ++P++ GL + +V I+ + S AL+ GHL+ WG G
Sbjct: 115 GQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGI 174
Query: 264 NST-SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
T S ++ P + S + F + G H L+ G + G + +G L + ++
Sbjct: 175 GKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD--TTD 232
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
RPL L+ +L V ++ G +H+AV+T + + T+G G GQLG + + P+
Sbjct: 233 RPLPTLLK---SLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPR 289
Query: 381 VV 382
V
Sbjct: 290 KV 291
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG D P LL V ++CG H LTS G VF+
Sbjct: 214 LFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTS-----DGGVFT 268
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G+SGQLGH P+ V F+ +T I+ G H+ V SG ++T G G
Sbjct: 269 FGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGG 326
Query: 155 FGQLGHGDYRSHSSPV 170
GQLG G + +SP+
Sbjct: 327 DGQLGLGVTNNCNSPM 342
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 168/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ P + QQV+ V + G G+ G+LG G D
Sbjct: 4021 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4075
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4076 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4127
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4128 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4185
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4186 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 4241
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4242 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4301
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G + Q
Sbjct: 4302 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4356
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4357 ISAGRCHSAAWT 4368
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 4008 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4058
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4059 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4175
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4176 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4234 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4291
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4292 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4156
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4157 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 164/377 (43%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3080 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3134
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3135 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3192
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P +V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3193 GEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3249
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + + P L I ++ I S AL+ G ++TWG+G
Sbjct: 3250 GKLG--RGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG-------- 3299
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H V +P +
Sbjct: 3300 --------------------------DYYRLGHGGDQH--------VRKPQP-------I 3318
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3319 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3378
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3379 NR-----VACGSSHSIA 3390
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+TS G V
Sbjct: 4253 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITS-----SGHVL 4307
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4308 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4367
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4368 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4424
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4425 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4468
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 4241 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4293
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 4354 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4408
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4409 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4468
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4469 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4514
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 18/241 (7%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFS 95
+SWGAG D +LG G H P +S+L V + CG ++ A+T G +++
Sbjct: 637 YSWGAGEDHRLGHGDTHARAVPT--KISALDRCVKAVFCGCSYSAAIT-----WSGNLYT 689
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG+ G+LGHG D P V + + +G HS ++ G ++ GDG +
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK-RGQLG 214
G+LG+G+ S P+ V + V +I G + S+ L + +Y +G G
Sbjct: 750 GKLGNGNCNSSLQPILVETL--PRVQRIFAGAQSSMALTTE---GHLYSWGKASCLGHQQ 804
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
V + ++ S+P++ L +V ++ AL++ G ++ WGR N + + CP S
Sbjct: 805 VERS-VQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGR--NDSQQI-CPSS 860
Query: 275 L 275
+
Sbjct: 861 V 861
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + RI++ + + L +++ G G++S A++ +G L+
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4203
Query: 260 GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
G G V S +P+ L Q G H L LT +GEV G G
Sbjct: 4204 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4263
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R+S RP + V +L+G+ V IA G+ HSA +T + ++TWG G +G+LG
Sbjct: 4264 KLGHGNRMSYDRP-----KLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLG 4318
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4319 HGDSEDQLRPKLVEALLGYR----AIDIACGSG 4347
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 161/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4202
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4203 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4262
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 4263 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITS---SGHVLTWGKGRYGRLGH 4319
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4320 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4377
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4378 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4434
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H ++ + TWG + GQLG G P++V
Sbjct: 4435 --KKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 4490
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4491 -ALQGKHI-VKVTCGSAHTLALS 4511
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 20/218 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
+++WG GT G+LG G D+ P + + L+ + + L G AH L LTS G V
Sbjct: 687 LYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTS-----EGLV 741
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG G G+LG+G +L P V + I AG S ++ G L++ G
Sbjct: 742 YAWGDGDYGKLGNGNCNSSLQPILVETLP----RVQRIFAGAQSSMALTTEGHLYSWGKA 797
Query: 154 TFGQLGHGDYRSH----SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ LGH S P VSS +K + +A G+ H L L C +V+G+G
Sbjct: 798 SC--LGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLA-LTSC--GEVFGWGRND 852
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
Q+ S + + +GL + GI+ +S
Sbjct: 853 SQQICPSSVSCEPLLRLPILVGLPTLPASGIACTASQS 890
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 21/210 (10%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V +G + QLG K V +P + + + + IS +S +G ++ G
Sbjct: 3029 VMVWGLNDKEQLGGLKGS--KVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGE 3086
Query: 262 GFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML 311
G N T +V P LP + + G H L LT DG+V G G L
Sbjct: 3087 GTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL 3146
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG G
Sbjct: 3147 GHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHG 3201
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
+ Q+ PK V R ++V CGS
Sbjct: 3202 DNATQLKPKQVT---ALAGRRV-IQVACGS 3227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R+ + I+ + +S G L+ C G + P + + + IA
Sbjct: 570 RFQVKQIACSESLLLLLSQDGKLYNCRLG----------KPELEPQPIEELAQETILSIA 619
Query: 185 --CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
C RH L + + Y +G+G+ +LG R+V I D + +
Sbjct: 620 GHCEGRHFLAIDSN---RNAYSWGAGEDHRLGHGDTHARAVP---TKISALDRCVKAVFC 673
Query: 243 NGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLS---FSQAALGWN--HVL 292
SAA++ G+LYTWGRG + SD C ++ +L+ ALG H L
Sbjct: 674 GCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSL 733
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
LT +G V G +G L + SS +P+ V E + +V +I AGA+ S +T
Sbjct: 734 CLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILV--ETLP-----RVQRIFAGAQSSMALT 786
Query: 353 ENRAIMTWG 361
+ +WG
Sbjct: 787 TEGHLYSWG 795
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
K+S LD V + G +SA +T + + TWG G +G+LG GN+ DQ P +V E+
Sbjct: 660 KISALDRC-VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEY 718
Query: 389 QNRDTQLEVFCGSGFTYAISRHCLPSQ 415
+ D L GSG +++ CL S+
Sbjct: 719 EIIDVAL----GSGDAHSL---CLTSE 738
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 180/381 (47%), Gaps = 48/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G+ FSWG S G+LGHG +
Sbjct: 294 DSLLPKALESTIVLDVQYIACGGQHAVLVTK-----QGESFSWGEESEGRLGHGVDSNVQ 348
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+PK + I ++ G HS V+ SG L+T G G FG LGHG+ SH P +V+
Sbjct: 349 HPKLIDALST--TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN 406
Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
F+ + +H IACG H+ V+ Q++ FG G G LG DR +SV +P+
Sbjct: 407 -FLMEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-KSVFIPREVDS 460
Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST---SDVNCPQSLP 276
L + V + +AA+ + G L+TWG G S D P+ +P
Sbjct: 461 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE-PKLVP 519
Query: 277 SSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ ++ F Q A G + + LT G V +G +G L +P P V
Sbjct: 520 TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPTRVE---- 574
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 575 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVE-----SL 629
Query: 391 RDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CGS FT A+ H
Sbjct: 630 KDKQVKSIACGSNFTAAVCLH 650
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 32/333 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + P+L++ S +++ ++ACG H A+T + G +++W
Sbjct: 329 FSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVT-----LSGDLYTW 383
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 384 GKGDFGILGHGNEVSHWVPKRVNFLMEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 441
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +G+ +++ +G
Sbjct: 442 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 501
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G + +LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 502 DGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 559
Query: 262 GFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
N +D P + L SF + A G HV VLT EV G +G L +
Sbjct: 560 LGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADD 619
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
P V +L +V IA G+ +A V
Sbjct: 620 RNSPT-----LVESLKDKQVKSIACGSNFTAAV 647
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +ALT+ G V+
Sbjct: 496 KLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 550
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P T +G H+ + I+ G H ++ ++T G
Sbjct: 551 TMGSPVYGQLGNPH-ADGKVP---TRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 606
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 607 GSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 640
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/412 (32%), Positives = 193/412 (46%), Gaps = 59/412 (14%)
Query: 36 VWSWGAGT-DGQLGTGRLH----------DELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
V+ WG G DG +G G +H D L P+ L + + V +ACGG H + +T
Sbjct: 251 VFMWGEGIGDGIMGAG-VHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTK 309
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G+VFSWG +LGHG VD +PK + G I ++ G HS V+ S
Sbjct: 310 K-----GEVFSWGEECGSRLGHGVEVDVSHPKLIDALCG--MNIELVACGEYHSCAVTLS 362
Query: 145 GCLFTCGDGTF--GQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQ 201
G L+T GDGT G LGHG SH P KVS + +V +ACG H+ V+ Q
Sbjct: 363 GDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTS---AGQ 419
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------- 250
++ FG G G LG S+S+P+ L + ++ +AA+
Sbjct: 420 LFTFGDGTFGALGHGDHS--SMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFE 477
Query: 251 ----SAEGHLYTWGRG------FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDG 298
S+ G L+TWG G PQS+ + + SF Q A G N + LT G
Sbjct: 478 SSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSG 537
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V +G + +G L P V+ + ++ K++N V ++A G+ H AV+T +
Sbjct: 538 RVYTMGSAVYGQLGSP--VADGKIPTLVEGKIAN---SFVEEVACGSYHVAVLTSKTEVY 592
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
TWG G +GQLG G+ + P +V+ + Q ++ V CG FT AIS H
Sbjct: 593 TWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKN----VVCGLNFTAAISLH 640
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG +LG G D P+L++ ++ ++ACG H A+T + G ++
Sbjct: 312 EVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT-----LSGDLY 366
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ SG LGHG PK V+ +G +++++ G H+ V+ +G LFT G
Sbjct: 367 TWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMH--VSYVACGPWHTAVVTSAGQLFTFG 424
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG------------ 199
DGTFG LGHGD+ S S P +V + + ++ACG+ H+ +++ +
Sbjct: 425 DGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSS 484
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+++ +G G +G+LG R V PQ L + ++ + S AL+ G +YT
Sbjct: 485 GKLFTWGDGDKGRLGHGDKEPRLV--PQSVTALINESFCQVACGHNLSVALTTSGRVYTM 542
Query: 260 GRGF-----NSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G + +D P + ++ S + A G HV VLT EV G +G L
Sbjct: 543 GSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQL 602
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 8/186 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G L PQ + S +ACG +ALT+ G+V+
Sbjct: 486 KLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTT-----SGRVY 540
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G GQLG + D P V + + + ++ G H ++ ++T G GT
Sbjct: 541 TMGSAVYGQLG-SPVADGKIPTLVEGKIANSF-VEEVACGSYHVAVLTSKTEVYTWGKGT 598
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGKRGQL 213
GQLGHGD ++P V +K V + CG+ + + L + + SG Q
Sbjct: 599 NGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSICSGCHNQF 658
Query: 214 GVSKDR 219
G + R
Sbjct: 659 GFRRKR 664
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 166/339 (48%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L ++ VS H LA T+ G+
Sbjct: 434 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE-----GE 488
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS VS+ G L+T G
Sbjct: 489 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 546
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 547 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 602
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 603 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 660
Query: 268 DVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 661 ATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 717
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV LDGV + QI+AG HS + +R ++ W
Sbjct: 718 KP-KKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 34/307 (11%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+V+ WG SS QL G L PK TF D I AG + +S G + C
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQT-----IEAGQYCTFVISSDGSVRAC 437
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
G G++G+LG GD + S+ K++ ++ + +++ H+L + +V+ +G
Sbjct: 438 GKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE---GEVFSWGD 494
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
G G+LG + P++ G L +V +SA SAA+S +G LYTWG
Sbjct: 495 GDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGR 552
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERV 317
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 553 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 612
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQ 376
+ V L G+ + ++ AG++ S +T + WG G LG G++
Sbjct: 613 YKPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 663
Query: 377 IHPKVVN 383
+ PK++
Sbjct: 664 LRPKLIE 670
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 534
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
V+E+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 535 AVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 584
Query: 406 AISR 409
A+S+
Sbjct: 585 ALSK 588
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 180/389 (46%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG G D P+L++ S ++ ++ACG H A+T + G ++
Sbjct: 328 EVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVT-----LSGDLY 382
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ SG LGHG+ V PK VT G I+ IS G H+ V+ +G LFT G
Sbjct: 383 TWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG--LHISSISCGPWHTALVTSAGKLFTFG 440
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 441 DGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKL 500
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 501 FTWGDGDKGRLG----------------------------HGDKEARLVP---------- 522
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + + LT G + +G +G L +P+ P
Sbjct: 523 -------TCVAALVEP-NFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQ-ADGKLP 573
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L V ++A GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 574 ARVE----GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLV 629
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 630 E-----ALKDKQVKSIACGTNFTAAICLH 653
>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 715
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 166/347 (47%), Gaps = 43/347 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWGA T GQLG G SP + +S L+++ LA GG H LAL S G V +WG
Sbjct: 227 SWGANTYGQLGNGTTTTSASP--VGVSGLNNIKSLAAGGNHSLALKSD-----GTVTAWG 279
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV-SDSGCLFTCGDGTFG 156
+ GQ+G+G + L P V+ G +T +SAG +HS + S +G ++ G T+G
Sbjct: 280 YNAYGQVGNGATANVLSPIAVSTLSG----VTAVSAGVSHSHAIGSSNGVIWGWGLNTYG 335
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-- 214
LG+ + S+P + + + +A G +H++ + D V+ +GS GQ+G
Sbjct: 336 GLGNNTKVNRSTPGTI--LLTSGLQGVAGGAQHTIYVKGD---GTVWAWGSNTYGQIGDG 390
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R+ V L +T I+ ++A + S AL+A G ++ WGR G ST++
Sbjct: 391 TPLRRLTPVQLSTLT------GIIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTN 444
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P +P+ A G H L L DG V G +H G L D P++V
Sbjct: 445 RSLPTQVPNLTGIVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYL 504
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ KV+ I+AG HS + +N WG EHGQL CD
Sbjct: 505 E-------KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQL-----CD 539
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 170/366 (46%), Gaps = 45/366 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN------LSSLSSVSMLACGGAHVLALTSPSSVI 89
VWSWG + LG + P + LS L+ V +A G H LAL S
Sbjct: 117 VWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKS----- 171
Query: 90 GGKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G V+SWG SSGQLG+G + + + V D ISAG HS + +G +
Sbjct: 172 NGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA-----VAISAGAAHSLALRANGAVV 226
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ G T+GQLG+G + +SPV VS N+ +A G HSL L D V +G
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGL--NNIKSLAAGGNHSLALKSD---GTVTAWGYN 281
Query: 209 KRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGR---- 261
GQ+G + + + +++ ++ + +SA S A+ S+ G ++ WG
Sbjct: 282 AYGQVGNGATANVLSPIAVSTLS------GVTAVSAGVSHSHAIGSSNGVIWGWGLNTYG 335
Query: 262 --GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G N+ + + P ++ + A G H + + GDG V G + +G + D +
Sbjct: 336 GLGNNTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRR 395
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P+ ++S L G+ I +AAGA HS + N + WG HGQLG G+T ++ P
Sbjct: 396 LTPV-----QLSTLTGI--IAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLP 448
Query: 380 -KVVNL 384
+V NL
Sbjct: 449 TQVPNL 454
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 158/355 (44%), Gaps = 36/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VWSWG + GQLG G L + + Q +NL+ ++S G AH LAL + G V
Sbjct: 175 VWSWGLNSSGQLGNGTLATQSAAVQAVNLTDAVAIS---AGAAHSLALRA-----NGAVV 226
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG + GQLG+G + P V+ + I ++AG NHS + G + G
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGLN----NIKSLAAGGNHSLALKSDGTVTAWGYNA 282
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQ+G+G + SP+ VS+ V ++ G+ HS + ++G+G G LG
Sbjct: 283 YGQVGNGATANVLSPIAVSTL--SGVTAVSAGVSHSHAI--GSSNGVIWGWGLNTYGGLG 338
Query: 215 VSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVN-- 270
+ RS +T GL G++ + + +G ++ WG + D
Sbjct: 339 NNTKVNRSTPGTILLTSGLQ-----GVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPL 393
Query: 271 ---CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + A G NH L L +G V G ++HG L D + + P
Sbjct: 394 RRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLP----- 448
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V NL G+ + +AAGA HS + + + WG GQLG D++ P V
Sbjct: 449 TQVPNLTGI--VALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAV 501
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 163/393 (41%), Gaps = 47/393 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W WG T G LG + +P + L+S + +A G H + + G V++
Sbjct: 326 IWGWGLNTYGGLGNNTKVNRSTPGTILLTS--GLQGVAGGAQHTIYVKGD-----GTVWA 378
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQ+G G + L P ++ G I ++AG NHS ++ +G +F G
Sbjct: 379 WGSNTYGQIGDGTPLRRLTPVQLSTLTG----IIAVAAGANHSLALAANGTVFAWGRNNH 434
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G + S P +V + + +A G HSL L D VY +G GQLG
Sbjct: 435 GQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLALRFD---GTVYAWGRNHLGQLGD 489
Query: 215 -VSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR---------GF 263
DR+ V++ H +E +V ISA + S A+ G + WG G
Sbjct: 490 ETCTDRLSPVAV-------HYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGS 542
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
S +P + A G NH L+L +G G + +G L D + P
Sbjct: 543 GSGRFSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAP- 601
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V + ++N ++AAG SA +T N + TWG GQLG D
Sbjct: 602 -VPITTLTN-----AARLAAGGNTSAALTTNGTVSTWGLNSSGQLG-----DNTTASRTT 650
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
+ + +EVF G A + H +T
Sbjct: 651 IAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKT 683
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG+ T GQ+G G L+P + LS+L+ + +A G H LAL + G VF+
Sbjct: 376 VWAWGSNTYGQIGDGTPLRRLTP--VQLSTLTGIIAVAAGANHSLALAA-----NGTVFA 428
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR + GQLG G + P V G I ++AG HS + G ++ G
Sbjct: 429 WGRNNHGQLGDGSTTNRSLPTQVPNLTG----IVALAAGATHSLALRFDGTVYAWGRNHL 484
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
GQLG SPV V + V I+ G HSL + ++ + +GS + GQL
Sbjct: 485 GQLGDETCTDRLSPVAVHYL--EKVVAISAGDNHSLAIHQN---GTAFAWGSDEHGQLCD 539
Query: 214 -GVSKDRIRSV--SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G R + +P + G +GI+A + + L A G + G G
Sbjct: 540 SGSGSGRFSPLISQIPGIVKG------IGIAAGANHTLLLEANGTAWACGDNLYGQLGDG 593
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR--- 321
+T+D + P + + + ++ A G N LT +G V G + G L D S T
Sbjct: 594 TTTDKSAPVPITTLTNAARLAAGGNTSAALTTNGTVSTWGLNSSGQLGDNTTASRTTIAP 653
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
L V GV + AG H V + + +WG + GQ+G G ++ P
Sbjct: 654 VLRTVYPTVEVFSGVA--SLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRPLPTA 711
Query: 382 VNL 384
L
Sbjct: 712 ALL 714
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 152/354 (42%), Gaps = 38/354 (10%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+Q VW+ G G+LG G D LSP + +S+L+ V +A G H LAL S
Sbjct: 12 RQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTGVISVAAGYYHSLALKSD----- 64
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++WG + G LG P V G + I+A + S + G +++
Sbjct: 65 GTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTG----VIAIAADYYQSFALKSDGTVWSW 120
Query: 151 GDGTFGQLGHGDYRSHSSPVKV-SSFVN-----KNVHQIACGMRHSLVLLKDCLGNQVYG 204
G LG+ + P +V SF +V IA G H+L L + V+
Sbjct: 121 GYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSN---GTVWS 177
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
+G GQLG +S ++ V + + V ISA S AL A G + +WG
Sbjct: 178 WGLNSSGQLGNGTLATQSAAVQAVNL----TDAVAISAGAAHSLALRANGAVVSWGANTY 233
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G +T+ P + + A G NH L L DG V G + +G + + +
Sbjct: 234 GQLGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATAN 293
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P++ VS L GV ++AG HS + + ++ WGWG + GLGN
Sbjct: 294 VLSPIA-----VSTLSGVTA--VSAGVSHSHAIGSSNGVI-WGWGLNTYGGLGN 339
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 40/309 (12%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++ G G+LG+G D+L P V+ G + ++AG+ HS + G ++
Sbjct: 15 GTVWASGYNYHGELGNGTATDSLSPVQVSNLTG----VISVAAGYYHSLALKSDGTVWAW 70
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G T+G LG + + PV+V + V IA S L D V+ +G
Sbjct: 71 GLNTYGNLGDNTTTTRTKPVQVLNLTG--VIAIAADYYQSFALKSD---GTVWSWGYNGN 125
Query: 211 GQLGVSKDRIRSVSLP-QVTIGLHDI-----EIVGISANGDRSAALSAEGHLYTWGRGFN 264
LG + + LP QV I ++V I+A + AL + G +++WG N
Sbjct: 126 SALGNASPATQK--LPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWG--LN 181
Query: 265 STSDVN----CPQS-------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
S+ + QS L +++ S A H L L +G V+ G + +G L +
Sbjct: 182 SSGQLGNGTLATQSAAVQAVNLTDAVAISAGAA---HSLALRANGAVVSWGANTYGQLGN 238
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+S P+ V S L+ +K +AAG HS + + + WG+ +GQ+G G T
Sbjct: 239 GTTTTSASPVGV-----SGLNNIK--SLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGAT 291
Query: 374 CDQIHPKVV 382
+ + P V
Sbjct: 292 ANVLSPIAV 300
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ G +H+ V G ++ G G+LG+G SPV+VS+ V +A G HS
Sbjct: 1 MEGGAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLT--GVISVAAGYYHS 58
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D V+ +G G LG + R+ + QV L+ ++ I+A+ +S AL
Sbjct: 59 LALKSD---GTVWAWGLNTYGNLGDNTTTTRTKPV-QV---LNLTGVIAIAADYYQSFAL 111
Query: 251 SAEGHLYTWGRGFNSTSDVNCP--QSLPSSLSFS------------QAALGWNHVLVLTG 296
++G +++WG NS P Q LP+ + S A G +H L L
Sbjct: 112 KSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKS 171
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+G V G + G L + + S A++ V+ D V I+AGA HS + N A
Sbjct: 172 NGTVWSWGLNSSGQLGNGTLATQ----SAAVQAVNLTDAVA---ISAGAAHSLALRANGA 224
Query: 357 IMTWGWGEHGQLGLGNTCDQIHP 379
+++WG +GQLG G T P
Sbjct: 225 VVSWGANTYGQLGNGTTTTSASP 247
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 180/389 (46%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG G D P+L++ S ++ ++ACG H A+T + G ++
Sbjct: 328 EVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVT-----LSGDLY 382
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ SG LGHG+ V PK VT G I+ IS G H+ V+ +G LFT G
Sbjct: 383 TWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG--LHISSISCGPWHTALVTSAGKLFTFG 440
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 441 DGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKL 500
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 501 FTWGDGDKGRLG----------------------------HGDKEARLVP---------- 522
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + + LT G + +G +G L +P+ P
Sbjct: 523 -------TCVAALVEP-NFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQ-ADGKLP 573
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L V ++A GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 574 ARVE----GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLV 629
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 630 E-----ALKDKQVKSIACGTNFTAAICLH 653
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 34/352 (9%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V +++ G +H +AL + G + +WGRG GQLGHG+ D L P ++ FD
Sbjct: 15 AVVLVSAGASHSVAL-----LAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP--G 67
Query: 128 ITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
IT + G +H+ + D +++ G G FG+LGHG+ +P V + + Q+ACG
Sbjct: 68 ITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACG 127
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H L + + +V +G + GQLG+ ++D + LPQ I + I+A
Sbjct: 128 DSHCLAV---TMAGEVLSWGRNQNGQLGLGTTEDSL----LPQTIQAFEGISVKMIAAGA 180
Query: 245 DRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
+ +AA++ +G +Y WG G +D P+ + S A GW H + ++
Sbjct: 181 EHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSS 240
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G S +G L + P KV L QI+ G H+ +T +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSSTSQISGGWRHTMALTSDGK 295
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ WGW + GQ+G G+ D P VN F +V CG T A +
Sbjct: 296 LYGWGWNKFGQVGAGDNADHCSPAQVN----FPEEQKVAQVACGWRHTLAFT 343
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 137/292 (46%), Gaps = 23/292 (7%)
Query: 12 GKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM 71
G +++I A E+E QV +SWG G G+LG G D +PQ + +
Sbjct: 67 GITSVICGADHTTAYSEDEHQV---YSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LACG +H LA+T + G+V SWGR +GQLG G D+L P+ + F+G ++ I
Sbjct: 124 LACGDSHCLAVT-----MAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEG--ISVKMI 176
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG H+ V++ G ++ G G +G LG GD P KVSS + +ACG RH++
Sbjct: 177 AAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTI 236
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ +Y +G K GQLG +P L D IS + AL+
Sbjct: 237 TVSSS---GSLYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALT 291
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLT 295
++G LY WG G +D P + P +Q A GW H L T
Sbjct: 292 SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 143/323 (44%), Gaps = 24/323 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG G DGQLG G D L P +++ ++ + CG H A + +V+SWG
Sbjct: 37 TWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEH----QVYSWG 92
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P+PV G + I ++ G +H V+ +G + + G GQ
Sbjct: 93 WGDFGRLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G P + +F +V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTED---GDIYGWGWGRYGNLGLGD 207
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
R V P+ + ++V ++ + +S+ G LYT+G G D
Sbjct: 208 RNDRFV--PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLV 265
Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + S SQ + GW H + LT DG++ G + G + + P V +
Sbjct: 266 PHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPE 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVT 352
KV Q+A G H+ T
Sbjct: 326 EQ-----KVAQVACGWRHTLAFT 343
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ AL V++ V+ ++AGA HS + + TWG GE GQLG G+ D++ P V+
Sbjct: 1 MDAALSAVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVI 60
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ D V CG+ T A S
Sbjct: 61 SGFDA----PGITSVICGADHTTAYSE 83
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 181/381 (47%), Gaps = 48/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G+ FSWG S G+LGHG +
Sbjct: 333 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHGVDSNVQ 387
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+PK + + I ++ G HS V+ SG L+T G G FG LGHG+ SH P +V+
Sbjct: 388 HPKLIDALNT--TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN 445
Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
F+ + +H IACG H+ V+ Q++ FG G G LG DR +SV +P+
Sbjct: 446 -FLMEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-KSVFIPREVDS 499
Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST---SDVNCPQSLP 276
L + V + +AA+ + G L+TWG G S D P+ +P
Sbjct: 500 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE-PKLVP 558
Query: 277 SSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ ++ F Q A G + + LT G V +G +G L +P P V
Sbjct: 559 TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPTRVD---- 613
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 614 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVE-----SL 668
Query: 391 RDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CGS FT A+ H
Sbjct: 669 KDKQVKSIACGSNFTAAVCLH 689
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 32/333 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + P+L++ + +++ ++ACG H A+T + G +++W
Sbjct: 368 FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVT-----LSGDLYTW 422
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 423 GKGDFGILGHGNEVSHWVPKRVNFLMEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 480
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +G+ +++ +G
Sbjct: 481 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 540
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G + +LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 541 DGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 598
Query: 262 GFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
N +D P + L SF + A G HV VLT EV G +G L +
Sbjct: 599 LGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADD 658
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
P V +L +V IA G+ +A V
Sbjct: 659 RNSPT-----LVESLKDKQVKSIACGSNFTAAV 686
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +ALT+ G V+
Sbjct: 535 KLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 589
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P T DG H+ + I+ G H ++ ++T G
Sbjct: 590 TMGSPVYGQLGNPH-ADGKVP---TRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 645
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 646 GSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 679
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 174/388 (44%), Gaps = 73/388 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +SWG G+LG G D P+L+ +V ++ACG H A+TS G ++
Sbjct: 328 EAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTS-----SGDLY 382
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G SSG LGH PK V +G R ++H+S G H+ ++ +G LFT G
Sbjct: 383 TWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLR--VSHVSCGPWHTALITSAGRLFTFG 440
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD +P +V +F ++ACG+ H+
Sbjct: 441 DGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAA------------------- 481
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDV 269
+V + + D + + G L+TWG G
Sbjct: 482 -------------------------VVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD 516
Query: 270 NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
N P+ P + SFS+ A + + LT G V +G + +G L P + P+
Sbjct: 517 NKPRLAPQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCP-LANGMSPI 575
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V V + V +I+ G+ H AV+T + TWG GE+GQLG G+ ++ P +V+
Sbjct: 576 CVEDYLVDST----VEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVD 631
Query: 384 LGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+ RD Q++ + CGS F+ AI H
Sbjct: 632 IL-----RDKQVKRIVCGSNFSAAICVH 654
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 121/317 (38%), Gaps = 74/317 (23%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +DA PK + + +IS G H+ V+ G F+ G+ G+LGHG
Sbjct: 291 GTRIDANTPK--SLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV 348
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S P + +F NV IACG HS + +Y +G G + + S +P
Sbjct: 349 SHPKLIKNFKGMNVELIACGEYHSCAVTS---SGDLYTWGDGAKSSGLLGHRSEASHWIP 405
Query: 227 QVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
+ GL + + + +S +A +++ G L+T+G G
Sbjct: 406 KKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDG----------------------- 442
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G HG R + +V +G+K +++A G
Sbjct: 443 ----------------TFGALGHG----------DRSGCITPREVETFNGLKTLKVACGV 476
Query: 346 EHSAVVTE-------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNR 391
H+A V E + + TWG G+ G+LG G+ ++ P+ + L D+
Sbjct: 477 WHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDK---- 532
Query: 392 DTQLEVFCGSGFTYAIS 408
+ EV C T A++
Sbjct: 533 -SFSEVACSYAMTVALT 548
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 181/381 (47%), Gaps = 48/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G+ FSWG S G+LGHG +
Sbjct: 299 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHGVDSNVQ 353
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+PK + + I ++ G HS V+ SG L+T G G FG LGHG+ SH P +V+
Sbjct: 354 HPKLIDALNT--TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN 411
Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
F+ + +H IACG H+ V+ Q++ FG G G LG DR +SV +P+
Sbjct: 412 -FLMEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-KSVFIPREVDS 465
Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST---SDVNCPQSLP 276
L + V + +AA+ + G L+TWG G S D P+ +P
Sbjct: 466 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE-PKLVP 524
Query: 277 SSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ ++ F Q A G + + LT G V +G +G L +P P V
Sbjct: 525 TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPTRVD---- 579
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 580 GKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVE-----SL 634
Query: 391 RDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CGS FT A+ H
Sbjct: 635 KDKQVKSIACGSNFTAAVCLH 655
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 32/333 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + P+L++ + +++ ++ACG H A+T + G +++W
Sbjct: 334 FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVT-----LSGDLYTW 388
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 389 GKGDFGILGHGNEVSHWVPKRVNFLMEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 446
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +G+ +++ +G
Sbjct: 447 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 506
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G + +LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 507 DGDKSRLGHGDKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 564
Query: 262 GFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
N +D P + L SF + A G HV VLT EV G +G L +
Sbjct: 565 LGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADD 624
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
P V +L +V IA G+ +A V
Sbjct: 625 RNSPT-----LVESLKDKQVKSIACGSNFTAAV 652
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +ALT+ G V+
Sbjct: 501 KLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 555
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P T DG H+ + I+ G H ++ ++T G
Sbjct: 556 TMGSPVYGQLGNPH-ADGKVP---TRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 611
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 612 GSNGRLGHGDADDRNSPTLVESLKDKQVKSIACG 645
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 166/339 (48%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L ++ VS H LA T+ G+
Sbjct: 431 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE-----GE 485
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS VS+ G L+T G
Sbjct: 486 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVSEDGELYTWG 543
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 544 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 599
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 600 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 657
Query: 268 DVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 658 ATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 714
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV LDGV + QI+AG HS + +R ++ W
Sbjct: 715 KP-KKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ L+ P + QQVV V + G G+ G+LG G D
Sbjct: 4087 EAGRNILVPTIAPSFSQA---QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-- 4141
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4142 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4190
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4191 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN 4248
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P KV++ +V Q+ACG+ H+LV+ D G V+ FG G G+LG+ +S
Sbjct: 4249 KKLPEKVTALEGYHVGQVACGLNHTLVVSAD--GMMVWAFGDGDYGKLGLGNSTAKSS-- 4304
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +G ++T+G+ + N PQ +P S
Sbjct: 4305 PQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLS 4364
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H LVL+ G+V G + G L P V+ L G
Sbjct: 4365 GIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREP-----TLVTTLQGKN 4419
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4420 IHQISAGRCHSAAWT 4434
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 166/359 (46%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + L P + S S + CG + G V
Sbjct: 4074 VFLWGAGRHGQLAEAGR--NILVPTIA--PSFSQAQQVVCGQNCTFVIQP-----NGTVL 4124
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4125 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4184
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4185 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTAD---GKLFTFGNGDYGRL 4241
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L + ++ + + +SA+G + +G+ G ++
Sbjct: 4242 GLGNTSNKK--LPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG+V G L + + RP
Sbjct: 4300 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRP-- 4357
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++V L G+ + +A GAEH+ V++ + TWG GQLGLG+T P +V
Sbjct: 4358 ---QQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVT 4413
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK + F + I AG + +S G + CG
Sbjct: 380 EVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQT----IEAGQYCTFVISSDGSVRACG 435
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++ + +++ H+L + +V+ +G G
Sbjct: 436 KGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 492
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA+S +G LYTWG
Sbjct: 493 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRL 550
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 551 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 610
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ V L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 611 KPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 661
Query: 378 HPKVVN 383
PK++
Sbjct: 662 RPKLIE 667
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 143/332 (43%), Gaps = 79/332 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK VF WG G GQL G +V + P +F + + G N + +
Sbjct: 4068 LGGKCDVFLWGAGRHGQLAEAGRNILVPTIAP---SFSQAQQ-----VVCGQNCTFVIQP 4119
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4120 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4176
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4177 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4212
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4213 -----------------------QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK 4249
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE--HGQLGLGNTCDQI 377
P EKV+ L+G V Q+A G H+ VV+ + +M W +G+ +G+LGLGN+ +
Sbjct: 4250 KLP-----EKVTALEGYHVGQVACGLNHTLVVSAD-GMMVWAFGDGDYGKLGLGNSTAKS 4303
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ V++ + +V CG+ F+ A+++
Sbjct: 4304 SPQKVDVLCGIGIK----KVACGTQFSVALTK 4331
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 476 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 531
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
V+E+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 532 AVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 581
Query: 406 AISR 409
A+S+
Sbjct: 582 ALSK 585
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 180/387 (46%), Gaps = 74/387 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++ +V ++ACG H A+T+ G+++
Sbjct: 97 EVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTT-----AGELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG+ V PK + +G + ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGKDVSHWIPKRIAGALEG--LAVAYVSCGTWHTALITTMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHG+ S S P +V S +ACG+ H+ +++ + +++
Sbjct: 210 DGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLF 269
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPRLKP----------- 290
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
C SL F + A G + + LT G+VL +G + +G L +P L
Sbjct: 291 ------TCVASL-IDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCL 343
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V + G V+Q+A G+ H AV+T + TWG G +G+LG G+ D+ K+
Sbjct: 344 ------VEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDR---KIPT 394
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + + CG+ FT AI +H
Sbjct: 395 LVEALRDRSVR-HIACGANFTAAICQH 420
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 169/338 (50%), Gaps = 29/338 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G ++ + LN + + SVS H LALT + GK
Sbjct: 416 VHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALT-----LDGK 470
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG PK V G++ + I+AG+ HS V++ G L+T G+
Sbjct: 471 VYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNK-VVCCIAAGYRHSAAVTEDGELYTWGE 529
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LGHGD S + PV+V NV Q+ACG H++ + +D G V+ FGSG G+
Sbjct: 530 GDYGRLGHGDNNSRNVPVQVKDVA--NVGQVACGSAHTVCVSQD--GQTVWSFGSGDNGK 585
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-STSDVNC 271
LG S V P+V L + I + S AL++ G +Y WG G + T V+
Sbjct: 586 LGHSD--TNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDA 643
Query: 272 PQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P L S ++G +H + LT D V G + G T P++
Sbjct: 644 TSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGH---CTTPITK 700
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTE---NRAIMTW 360
+KV LDGV V QI+AG H+ T +R +++W
Sbjct: 701 P-KKVLGLDGVAVHQISAGTSHTVAWTALPMDRQVVSW 737
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 31/286 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G M L PK T F + I AG + + G + CG
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQ----QIEAGQYCTFVIFPDGFVHACG 420
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNV----HQIACGMRHSLVLLKDCLGNQVYGFGS 207
G++G+LG GD ++ + +K +F N+ + H+L L D +VY +G
Sbjct: 421 KGSYGRLGLGD-STNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLD---GKVYSWGD 476
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR----- 261
G G+LG + + + P++ G ++V A G R SAA++ +G LYTWG
Sbjct: 477 GDYGKLGHGNSQTQKI--PKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGR 534
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERV 317
G + N P + + Q A G H + ++ DG+ V G +G L SD RV
Sbjct: 535 LGHGDNNSRNVPVQVKDVANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRV 594
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ + L G+ + ++ G++ S +T + WG G
Sbjct: 595 YKPK-------VIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCG 633
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++ G + QL G P +SF + QI G + V+ D V+ G
Sbjct: 366 VYVWGSNSSHQLAEGSMDKILVPKLATSF--GSAQQIEAGQYCTFVIFPDGF---VHACG 420
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-----RSAALSAEGHLYTWGR 261
G G+LG+ D L ++ D E + S + + AL+ +G +Y+WG
Sbjct: 421 KGSYGRLGLG-DSTNQTQLKRLNF---DNECLVKSVSSSKGSDGHTLALTLDGKVYSWGD 476
Query: 262 G------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G ++ P+ + +L A G+ H +T DGE+ G +G L
Sbjct: 477 GDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLG 536
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLG 371
+ S P+ V D V Q+A G+ H+ V+++ + + ++G G++G+LG
Sbjct: 537 HGDNNSRNVPVQVK-------DVANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHS 589
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+T PKV+ R +V CGS + A++
Sbjct: 590 DTNRVYKPKVIEALQGMVIR----KVCCGSQCSLALT 622
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ-IAAGAEHS 348
H L LT DG+V G +G L + P + V G KV+ IAAG HS
Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIP-----KLVEGALGNKVVCCIAAGYRHS 515
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP----KVVNLGDEFQNRDTQLEVFCGSGFT 404
A VTE+ + TWG G++G+LG G+ + P V N+G +V CGS T
Sbjct: 516 AAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVANVG----------QVACGSAHT 565
Query: 405 YAISR 409
+S+
Sbjct: 566 VCVSQ 570
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 192/398 (48%), Gaps = 43/398 (10%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++WS G DG + + +D L+P+ L + + V ++CG HV +T G+V
Sbjct: 232 EIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTR-----QGEV 286
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG S G+LGHG +PK V I +++ G H+ +S SG LFT GDG
Sbjct: 287 FTWGEESGGRLGHGIEDHFTHPKLVESL--AVTNIDYVACGEYHTCAISTSGDLFTWGDG 344
Query: 154 T--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ G LGHG SH P +VS V IACG HS + + +++ FG G
Sbjct: 345 SNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSN---GKLFTFGDGTF 401
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA----LSAEG------HLYTWG 260
G LG DR +SVS P+ L+ ++ + ++ +AA +S G L+TWG
Sbjct: 402 GALG-HGDR-KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWG 459
Query: 261 RGFN-----STSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G D + SSL +F Q A G + LT G V +GGS +G L
Sbjct: 460 DGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+P SS + ++ L G V +I+ GA H+AV+T + TWG G +GQLG G+
Sbjct: 520 NP---SSNGKIPCLVQ--DRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGD 574
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
T D+ P +V E ++ + CG+ FT +I H
Sbjct: 575 TEDRKLPTLVEALKERHVKN----LSCGANFTSSICIH 608
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 178/393 (45%), Gaps = 84/393 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D PQL+ + S+ ++ACG H A+T + G ++
Sbjct: 332 EVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVT-----LSGDLY 386
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
SWG G+ G LGHG + PK V +G R + I+ G H+ V+ +G LFT G
Sbjct: 387 SWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLR--VASIACGPWHTALVTTTGLLFTFG 444
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGH D +S SP +V S + ACG+ H+ +++ +G+ ++
Sbjct: 445 DGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKL 504
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G++G+LG R V P L D
Sbjct: 505 FTWGDGEKGRLGHGDKEQRLV--PTCVAALVD---------------------------- 534
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+F Q A G++ + LT G V +G S +G L DP+
Sbjct: 535 ----------------HNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQ------- 571
Query: 323 LSVALEKVSNLDGVKVIQ-----IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
A K+ L K+++ IA GA H AV+T N + TWG G +G+LG G+ D+
Sbjct: 572 ---ADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRN 628
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P +V E Q + + CG+ FT AI H
Sbjct: 629 TPTLVEALKEKQVKS----IACGATFTAAICLH 657
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L LE LD V IA G +H+A+VT+ + TWG G+LG G CD HP++V
Sbjct: 302 LPKPLESALVLD---VQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLV 358
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 165/352 (46%), Gaps = 34/352 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V+ ++CG +H LAL S G SWGRG GQLGHG+ + KP F + +
Sbjct: 16 VTSVSCGSSHSLALLS-----NGIALSWGRGEDGQLGHGDAEE--RKKPRAIFHLMQASC 68
Query: 129 THISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ + +G +S +S +++ G G FG+LGHGD P + + +N+ ++ACG
Sbjct: 69 SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGD 128
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H+L + +++ FG + GQLG+ + D I LPQ L E+ I+ G+
Sbjct: 129 THTLAVTDT---GELFSFGRNQNGQLGLGTTSDAI----LPQPVESLRGQEVTSIACGGE 181
Query: 246 RSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSL------SFSQAALGWNHVLVLTGD 297
S A ++ G ++ WG G V P+ LPS + + A GW H +
Sbjct: 182 HSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADET 241
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G V G S +G L + + P + V +L +++ IA G H++ ++ +
Sbjct: 242 GAVYTFGWSKYGQLGHGDCIDQLVP-----KAVESLKDSRIVLIAGGWRHTSAADDSGKL 296
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+WGW + GQLG+G+ D P V + N + CG T+A++
Sbjct: 297 YSWGWNKFGQLGIGSNTDSNAPVPV----QGLNTSPVKLLSCGWRHTFAVTE 344
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 154/351 (43%), Gaps = 26/351 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G + P+ + +S S + G + +AL+ P + +V+SWG
Sbjct: 37 SWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRN----EVYSWG 92
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG+ D P+P+ G I ++ G H+ V+D+G LF+ G GQ
Sbjct: 93 WGDFGRLGHGDCNDVFIPQPIRALAGR--NIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G P V S + V IACG HSL V+ +G G+ G LGV
Sbjct: 151 LGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATS---AGDVFAWGWGRYGNLGVGP 207
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
R LP GL +++ ++ S A G +YT+G G D
Sbjct: 208 PEDR--HLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQLV 265
Query: 272 PQSLPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P+++ SL S+ L GW H G++ G + G L S P+
Sbjct: 266 PKAV-ESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPV----- 319
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V L+ V ++ G H+ VTE + +WG G +GQLG D P
Sbjct: 320 PVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAP 370
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 144/305 (47%), Gaps = 22/305 (7%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q +V+SWG G G+LG G +D PQ + + ++ +ACG H LA+T
Sbjct: 83 QPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDT----- 137
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++FS+GR +GQLG G DA+ P+PV G +T I+ G HS + +G +F
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQE--VTSIACGGEHSLAATSAGDVFAW 195
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG G P +V V +ACG RHS+ D G VY FG K
Sbjct: 196 GWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA--ADETG-AVYTFGWSKY 252
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
GQLG D I + +P+ L D IV I+ ++A G LY+WG G
Sbjct: 253 GQLG-HGDCIDQL-VPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIG 310
Query: 265 STSDVNCPQSLPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
S +D N P + L+ S L GW H +T G+V G +G L E +
Sbjct: 311 SNTDSNAPVPV-QGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNA 369
Query: 322 PLSVA 326
P+ +A
Sbjct: 370 PVRLA 374
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 124/253 (49%), Gaps = 12/253 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++S+G +GQLG G D + PQ + V+ +ACGG H LA TS G VF
Sbjct: 139 ELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATS-----AGDVF 193
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G LG G D P V +G + +T ++ GW HS ++G ++T G
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHGLEGVK--VTSVACGWRHSIAADETGAVYTFGWSK 251
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD P V S + + IA G RH+ ++Y +G K GQLG
Sbjct: 252 YGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDS---GKLYSWGWNKFGQLG 308
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + +P GL+ + +S + A++ G +++WGRG N N P+
Sbjct: 309 IGSNTDSNAPVP--VQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKD 366
Query: 275 LPSSLSFSQAALG 287
+ + ++ ++G
Sbjct: 367 TNAPVRLAELSMG 379
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G LG G D P ++ V+ +ACG H +A G V++
Sbjct: 192 VFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADET-----GAVYT 246
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G GQLGHG+ +D L PK V R I I+ GW H+ DSG L++ G F
Sbjct: 247 FGWSKYGQLGHGDCIDQLVPKAVESLKDSR--IVLIAGGWRHTSAADDSGKLYSWGWNKF 304
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G ++PV V V ++CG RH+ + + V+ +G G GQLG
Sbjct: 305 GQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTE---AGDVFSWGRGVNGQLGH 361
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
KD V L ++++G +E +G+SA+
Sbjct: 362 NEPKDTNAPVRLAELSMGSIKLEDLGVSAS 391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 27/230 (11%)
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
+RS S ++V+S ++CG HSL LL + + +G G+ GQLG R
Sbjct: 7 FRSAVSDLRVTS--------VSCGSSHSLALLSNGI---ALSWGRGEDGQLGHGDAEERK 55
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWG------RGFNSTSDVNCPQSL 275
P+ L + + + S ALS +Y+WG G +DV PQ +
Sbjct: 56 --KPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPI 113
Query: 276 PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + + A G H L +T GE+ G + +G L T ++ + V +L
Sbjct: 114 RALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLG-----LGTTSDAILPQPVESL 168
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
G +V IA G EHS T + WGWG +G LG+G D+ P V+
Sbjct: 169 RGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVH 218
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 167/361 (46%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P+ + + ++V +ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P + Y I IS G HS +SD G + + GD
Sbjct: 61 VYACGSNDYSQLGH----DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH + P V V+K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV S + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ P L + +L A G + LT +G V G +G L + P
Sbjct: 234 DETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ + +R + +G G GQLG +T + P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 142/304 (46%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + ++ G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG + QLGH P + + + QI+CG RHSL L QV +G
Sbjct: 64 CGSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSD---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + ++ V LP+V L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGHATEK-EIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D+ N P L + L AA+ G NH +++ G V G ++ G L + +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P ++ L + V +A G E S +T + T G G +GQLG G + +++
Sbjct: 238 RAYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D L L++L + + +ACGG H ++ G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGKVYAFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q+ACG RH+L L +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTAT---GKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS QLG R PQ+ L D I+ IS S ALS G + +WG
Sbjct: 64 CGSNDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWG---- 115
Query: 265 STSDVNCPQ----------SLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
D +C Q LP S + Q A G NH L LT GE+ G + +
Sbjct: 116 ---DNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 173 GQLGVNSPNDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + V GDEF
Sbjct: 228 GQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF 261
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 160/377 (42%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT-----LDGK 3093
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3151
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3208
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I +V I S AL+ G ++TWG+G
Sbjct: 3209 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG-------- 3258
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H P +
Sbjct: 3259 --------------------------DYYRLGHGGDQHVRKPQP---------------I 3277
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3278 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3337
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3338 NR-----VACGSSHSIA 3349
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+T+ G V
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4210
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4327
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4328 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 4144 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4196
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + +V + S AL+
Sbjct: 4257 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4311
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4417
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G D +LG G H P + V + CG ++ A+T GG + +W
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLTW 692
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G +F GDG +G
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G+ P+ V S V ++ G + S+ L + Q+Y +G +
Sbjct: 753 KLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQLV 807
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ + ALS+ G ++ WGR N + + CP S+
Sbjct: 808 ERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASVS 864
Query: 277 S 277
S
Sbjct: 865 S 865
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 162/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4105
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 4166 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4223 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4280
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4281 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4337
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 4338 --KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 4393
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4394 -ALQGKHI-VKVTCGSAHTLALS 4414
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + S +G +Y
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 3043
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 3104 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V R ++V CGS
Sbjct: 3159 HGDNTTQLKPKLVT---ALAGRRV-VQVACGS 3186
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 70/286 (24%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R+ I ++ +S G L+T + + P+ + + IA
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLA----------KPEAEPLPMEEVAHDVFISIA 620
Query: 185 --CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
C RH L + + + Y +G+G+ +LG R+V P L + +
Sbjct: 621 GHCEGRHFLAIDSN---HNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVYC 675
Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
SAA++ G+L TWGRG + A LG
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-------------------TYARLG--------------- 701
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
HG D S L VAL +D + + +G HS +T + WG
Sbjct: 702 -----HGNSDD----RSLPTLVVALSDHMVVD----VALGSGDAHSLALTSEGLVFAWGD 748
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G++G+LG GN + P +V Q VF GS F+ A+S
Sbjct: 749 GDYGKLGNGNCNGSLQPILVESLPRVQR------VFAGSQFSVALS 788
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + L P L+ SL V + G +AL+S G++++
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRVFAGSQFSVALSS-----EGQLYT 795
Query: 96 WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + LGH + ++ P+ V+ R I ++ H +S SG +F G
Sbjct: 796 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGWG 851
Query: 152 DGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLV 192
Q+ S +P+ V S IAC SLV
Sbjct: 852 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV 894
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 163/377 (43%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3148 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3202
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3203 VFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKK--IRDVACGSSHSAAISSQGELYTWGL 3260
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3261 GEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3317
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I ++ I S AL+ G ++TWG+G
Sbjct: 3318 GKLG--RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG-------- 3367
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H V +P +
Sbjct: 3368 --------------------------DYYRLGHGGDQH--------VRKPQP-------I 3386
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
+ L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3387 AGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3446
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3447 NR-----VACGSSHSIA 3458
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + +V+ +ACG AH A+T+ G V
Sbjct: 4343 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA-----SGHVL 4397
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L P+ V G+R +G + ++D +++ GDG
Sbjct: 4398 TWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD 4457
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4458 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4514
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4515 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4558
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G + I+ G
Sbjct: 4331 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MNVADIACG 4383
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
HS ++ SG + T G G +G+LGHGD P V + + IACG + L
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTL- 4442
Query: 195 KDCLGN--QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
C+ + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 4443 --CINDDDNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4498
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4499 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4558
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4559 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4604
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G D +LG G H P + L V + CG ++ A+T G +++W
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKITLLD-RCVKAVFCGCSYSAAITC-----SGNLYTW 695
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G ++ GD +G
Sbjct: 696 GRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYG 755
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G+ SPV V S V ++ G + S+ L D Q+Y +G +
Sbjct: 756 KLGNGNLNGSMSPVLVESL--PKVQRVFAGAQFSMALTTD---GQLYSWGKASCLGHQLV 810
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ + S+P++ GL IV ++ ALS+ G ++ WGR N + + CP S+
Sbjct: 811 ERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGR--NDSQQI-CPSSVS 867
Query: 277 S 277
S
Sbjct: 868 S 868
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 170/420 (40%), Gaps = 66/420 (15%)
Query: 4 PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHD-ELSPQLLN 62
P + + S + N K ++++ + +V + S DG+L R+ E PQLL
Sbjct: 558 PALSWSSDPSSLPLLNCKFQVQQIVCSESIVLILS----EDGKLYNWRMFKPETEPQLLE 613
Query: 63 LSSLSSVSMLA--CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF 120
+ ++ +A C G H +A+ I +SWG G +LGHG+ P +T
Sbjct: 614 EIAHETIVSIASHCEGRHFMAID-----INRNAYSWGNGEDHRLGHGDTHARAVPTKITL 668
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
D + + G ++S ++ SG L+T G GT+ +LGHG+ P V + +
Sbjct: 669 LD---RCVKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEI 725
Query: 181 HQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGV-----SKDRIRSVSLPQVTIGLH 233
+A G HSL L + VY +G G+LG S + SLP+V
Sbjct: 726 IDVALGSGDAHSLCLTSE---GHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ---- 778
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQ---- 283
+ A S AL+ +G LY+WG+ S C S+P +S Q
Sbjct: 779 -----RVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWC--SVPRLISGLQHKRI 831
Query: 284 --AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A+G H L L+ GEV G + + P VSS L V + + L + +
Sbjct: 832 VDVAVGVAHCLALSSCGEVFGWGRNDSQQIC-PSSVSSEPLLRVPI--LVALPTLPASGV 888
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
A A S + W + + G+ C P V++ G+ QL C S
Sbjct: 889 ACTASQSLI-----------WTQSSRQGVPLRC----PFVIDPGEPTFRLLDQLLSMCSS 933
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 162/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4238 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4292
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4293 TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4352
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V NV IACG HS + V +G G+ G+L
Sbjct: 4353 GKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4409
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4410 GDSEDQLRP-QLVEALLGYRAIDIACGSGDA-QTLCINDDDNVWSWGDGDYGKLGRGGSD 4467
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4468 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4524
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 4525 --KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 4580
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4581 -ALQGKHI-VKVTCGSAHTLALS 4601
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + + G +Y
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVGQNGKVYAC 3152
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 3213 KLGHGNRTTLDKP-----RLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3267
Query: 370 LGNTCDQIHPKVV 382
G+ Q+ PK+V
Sbjct: 3268 HGDNSTQLKPKLV 3280
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 61/248 (24%)
Query: 163 YRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
++ + P + ++ + IA C RH + + + Y +G+G+ +LG
Sbjct: 603 FKPETEPQLLEEIAHETIVSIASHCEGRHFMAI---DINRNAYSWGNGEDHRLGHGDTHA 659
Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS 280
R+V I L D + + SAA++ G+LYTWGRG
Sbjct: 660 RAVP---TKITLLDRCVKAVFCGCSYSAAITCSGNLYTWGRG------------------ 698
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ A LG HG D +PL + ++ + + V
Sbjct: 699 -TYARLG--------------------HGNSDD-------QPLPTVVMALTEHEIIDVA- 729
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
+ +G HS +T + WG ++G+LG GN + P +V + Q VF G
Sbjct: 730 LGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQR------VFAG 783
Query: 401 SGFTYAIS 408
+ F+ A++
Sbjct: 784 AQFSMALT 791
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
K++ LD V + G +SA +T + + TWG G + +LG GN+ DQ P VV E
Sbjct: 665 KITLLDRC-VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEH 723
Query: 389 QNRDTQLEVFCGSGFTYAISRHCLPSQ 415
+ D L GSG +++ CL S+
Sbjct: 724 EIIDVAL----GSGDAHSL---CLTSE 743
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 166/361 (45%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P + + ++V +ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P+ + Y I I G HS +SD G + + GD
Sbjct: 61 VYACGSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH D P V V K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV S + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ + P L + +L A G + LT +G V G +G L + P
Sbjct: 234 DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ + +R + +G G GQLG +T + P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + ++ G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG + QLGH P+ + + + QI CG RHSL L QV +G
Sbjct: 64 CGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSD---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + D+ V LP+V L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D+ N P L + L AA+ G NH +++ G V G ++ G L + +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ P ++ L + V +A G E S +T + T G G +GQLG G + +++
Sbjct: 238 RSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D L L++L + + +ACGG H ++ G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q+ACG RH+L L +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA---TGKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS QLG R + +P+ L D I+ I S ALS G + +WG
Sbjct: 64 CGSNDYSQLGHDLPTKRPLLIPE----LQDYVIIQICCGSRHSLALSDWGQVLSWG---- 115
Query: 265 STSDVNCPQ----------SLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
D +C Q LP + + Q A G NH L LT GE+ G + +
Sbjct: 116 ---DNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 173 GQLGVNSPNDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + V GDEF
Sbjct: 228 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 166/361 (45%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P + + ++V +ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P+ + Y I I G HS +SD G + + GD
Sbjct: 61 VYACGSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH D P V V K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV S + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ + P L + +L A G + LT +G V G +G L + P
Sbjct: 234 DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ + +R + +G G GQLG +T + P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + ++ G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG + QLGH P+ + + + QI CG RHSL L QV +G
Sbjct: 64 CGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSD---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + D+ V LP+V L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D+ N P L + L AA+ G NH +++ G V G ++ G L + +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ P ++ L + V +A G E S +T + T G G +GQLG G + +++
Sbjct: 238 RSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D L L++L + + +ACGG H ++ G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 51/274 (18%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q+ACG RH+L L +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA---TGKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS QLG R + +P+ L D I+ I S ALS G + +WG
Sbjct: 64 CGSNDYSQLGHDLPTKRPLLIPE----LQDYVIIQICCGSRHSLALSDWGQVLSWG---- 115
Query: 265 STSDVNCPQ----------SLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
D +C Q LP + + Q A G NH L LT GE+ G + +
Sbjct: 116 ---DNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 173 GQLGVNSPNDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + V GDEF
Sbjct: 228 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 261
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 167/361 (46%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P+ + + ++V ++CG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTA-----TGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P + Y I IS G HS +SD G + + GD
Sbjct: 61 VYACGSNDYSQLGH----DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH + P V V+K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV S + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ P L + +L AA G + LT +G V G +G L + P
Sbjct: 234 DETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ +R + +G G GQLG +T + P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 141/304 (46%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + +S G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG + QLGH P + + + QI+CG RHSL L QV +G
Sbjct: 64 CGSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSD---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + ++ V LP+V L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGHATEK-EIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D+ N P L + L AA+ G NH +++ G V G ++ G L + +
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P ++ L + V A G E S +T + T G G +GQLG G + +++
Sbjct: 238 RAYP-----TQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D L L++L + + +ACGG H ++ G
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFT 149
VF WGR + GQLG + + YP + G R+ + G S F+++ G +FT
Sbjct: 218 AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFA----ACGDEFSVFLTNEGGVFT 273
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG G +GQLGHG + P V + + Q+ACG RH+L + +VY FG G
Sbjct: 274 CGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPS--RGKVYAFGLGS 331
Query: 210 RGQLGVSKDRIRSVSLPQVTIG 231
GQLG +S+ LPQV IG
Sbjct: 332 SGQLGTRS--TKSLMLPQVVIG 351
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 116/274 (42%), Gaps = 51/274 (18%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q++CG RH+L L +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTAT---GKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS QLG R PQ+ L D I+ IS S ALS G + +WG
Sbjct: 64 CGSNDYSQLGHDLPTKR----PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWG---- 115
Query: 265 STSDVNCPQ----------SLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
D +C Q LP S + Q A G NH L LT GE+ G + +
Sbjct: 116 ---DNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 173 GQLGVNSPNDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + GDEF
Sbjct: 228 GQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEF 261
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 180/412 (43%), Gaps = 34/412 (8%)
Query: 1 MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL 60
MVA ++ T G + ++ P + +WG + QLG G + +P
Sbjct: 31 MVAIVLGVTSVGAAPVLAQGVPSAAAGPPGTGL----AWGDNAESQLGDGTTTNRSTPVT 86
Query: 61 LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF 120
++L + ++++ +A G H LA+TS G V +WG SSGQLG G P V
Sbjct: 87 VDLPADTTITAVAAGQGHSLAVTS-----AGTVLAWGANSSGQLGDGTTTPRSTPVAVDL 141
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKN 179
G T+T ++AG HS V+ +G + G GQL G ++SS P+ V
Sbjct: 142 PAG--TTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTT 199
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V +A G HSL L V +G+ GQLG RS + V +
Sbjct: 200 VTAVAAGNAHSLALTS---AGTVLAWGANSSGQLGDGTTTPRSTPV-AVDLPAGTTISTI 255
Query: 240 ISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQS--LPSSLSFSQAALGWNHV 291
+++ S A+++ G + WG F + ++ + P + LP+ + + A G H
Sbjct: 256 AASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHS 315
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
L +T G +L GG+ G L D SS+ P++V L G V +A GA HS +
Sbjct: 316 LAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPA-----GTTVTAVAGGAGHSLAL 370
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
T ++ WG+ GQLG G T ++ P +L DT + G F
Sbjct: 371 TSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDL-----PADTTITAIAGGSF 417
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 146/339 (43%), Gaps = 35/339 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WGA + GQLG G +P ++L + ++V+ +A G H LA+TS G V
Sbjct: 113 TVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTS-----TGTVL 167
Query: 95 SWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG +GQL G ++ P V G T+T ++AG HS ++ +G + G
Sbjct: 168 AWGLNVTGQLYDGTTTTNSSTPIVVDLPAG--TTVTAVAAGNAHSLALTSAGTVLAWGAN 225
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G S+PV V A HSL + + +G+ GQ
Sbjct: 226 SSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTST---GTMLAWGANFTGQ 282
Query: 213 LG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
LG ++ +V LP T + ++ S A+++ G + WG G
Sbjct: 283 LGDGTITNRSTPVAVDLPAGT------TVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLG 336
Query: 263 FNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
ST+ + P + LP+ + + A G H L LT G +L G + G L D + +
Sbjct: 337 DGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRS 396
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
P++ L + IA G+ HS V + + T
Sbjct: 397 TPIATDLPA-----DTTITAIAGGSFHSLAVVPSASTTT 430
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 170/362 (46%), Gaps = 30/362 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
++++ WG + GQLG G + +E L+P + S+V+ +ACG H L LT+ G
Sbjct: 1 MELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTA-----SG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KV++ G QLGH + +P+ + Y IT I+ G HS +S+ G +F+ G
Sbjct: 56 KVYACGSNDYSQLGH----ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWG 111
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
D GQLGH D P V + V+K V QIACG HSL L C G ++Y +GS
Sbjct: 112 DNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLAL--TCCG-ELYSWGSNLY 168
Query: 211 GQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLGVS + ++ + P L I + I+ G+ S +S ++ WGR G
Sbjct: 169 GQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N ++ P L + +L A G + LT +G V G +G L +
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEML 288
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPK 380
P V L G + Q+A G H+ + +R I +G G GQLG NT P+
Sbjct: 289 P-----RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQ 343
Query: 381 VV 382
+V
Sbjct: 344 LV 345
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D + S + L++L VS +ACGG H ++ S+V G
Sbjct: 159 ELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFG- 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WGR + GQLG + + YP + + ++ G S F++ G +FTCG
Sbjct: 218 ----WGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTIEGGVFTCG 271
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ ++YGFG G G
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS--RGRIYGFGLGSSG 329
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S++LPQ+ IG
Sbjct: 330 QLGTRN--TKSLNLPQLVIG 347
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 125/267 (46%), Gaps = 37/267 (13%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G+ + GQLG G +P ++ + V+QIACG RH+L L +VY
Sbjct: 3 LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTA---SGKVYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
GS QLG R + +P+ L D I I+ S ALS G +++WG
Sbjct: 60 CGSNDYSQLGHELPTKRPLQIPE----LQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115
Query: 262 ---GFNSTSD-VNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGML--SD 313
G S D V P+ + + +S + Q A G NH L LT GE+ G + +G L S
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSS 175
Query: 314 PERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P + S P+ +++ L G+ V IA G HS +++++ A+ WG GQLGL +
Sbjct: 176 PNDLQQSNTPM-----RLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLND 230
Query: 373 TCDQIHP-----------KVVNLGDEF 388
++ +P + V GDEF
Sbjct: 231 ETNRAYPTQLKTLRTLGVRFVACGDEF 257
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 160/377 (42%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 2694 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 2748
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 2749 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 2806
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 2807 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 2863
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I +V I S AL+ G ++TWG+G
Sbjct: 2864 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG-------- 2913
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H P +
Sbjct: 2914 --------------------------DYYRLGHGGDQHVRKPQP---------------I 2932
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 2933 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 2992
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 2993 NR-----VACGSSHSIA 3004
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G D +LG G H P + V + CG ++ A+T GG + +W
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLTW 346
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G +F GDG +G
Sbjct: 347 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 406
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G+ P+ V S V ++ G + S+ L + Q+Y +G +
Sbjct: 407 KLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQLV 461
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ + ALS+ G ++ WGR N + + CP S+
Sbjct: 462 ERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASVS 518
Query: 277 S 277
S
Sbjct: 519 S 519
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + S +G +Y
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 2698
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 2759 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 2813
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V R ++V CGS
Sbjct: 2814 HGDNTTQLKPKLVT---ALAGRRV-VQVACGS 2841
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 70/286 (24%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R+ I ++ +S G L+T + + P+ + + IA
Sbjct: 225 RFQIKQVACCETQMLILSQEGKLYTWRLA----------KPEAEPLPMEEVAHDVFISIA 274
Query: 185 --CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
C RH L + + + Y +G+G+ +LG R+V P L + +
Sbjct: 275 GHCEGRHFLAIDSN---HNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVYC 329
Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
SAA++ G+L TWGRG + A LG
Sbjct: 330 GCSYSAAITCGGNLLTWGRG-------------------TYARLG--------------- 355
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
HG D S L VAL +D + + +G HS +T + WG
Sbjct: 356 -----HGNSDD----RSLPTLVVALSDHMVVD----VALGSGDAHSLALTSEGLVFAWGD 402
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G++G+LG GN + P +V Q VF GS F+ A+S
Sbjct: 403 GDYGKLGNGNCNGSLQPILVESLPRVQR------VFAGSQFSVALS 442
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + L P L+ SL V + G +AL+S G++++
Sbjct: 397 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRVFAGSQFSVALSS-----EGQLYT 449
Query: 96 WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + LGH + ++ P+ V+ R I ++ H +S SG +F G
Sbjct: 450 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGWG 505
Query: 152 DGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLV 192
Q+ S +P+ V S IAC SLV
Sbjct: 506 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV 548
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 180/387 (46%), Gaps = 74/387 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++ +V ++ACG H A+T+ G+++
Sbjct: 97 EVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTT-----AGELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG+ V PK + +G + ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGKDVSHWIPKRIAGALEG--LAVAYVSCGTWHTALITTMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHG+ S S P +V S +ACG+ H+ +++ + +++
Sbjct: 210 DGTFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLF 269
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 270 TWGDGDKHRLG----------------------------HGDKEPRLKP----------- 290
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
C SL F + A G + + LT G+VL +G + +G L +P L
Sbjct: 291 ------TCVASLI-DYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCL 343
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V + G V+Q+A G+ H AV+T + TWG G +G+LG G+ D+ K+
Sbjct: 344 ------VEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDR---KIPT 394
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + + CG+ FT AI +H
Sbjct: 395 LVEALRDRSVR-HIACGANFTAAICQH 420
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 189/398 (47%), Gaps = 43/398 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW G DG + + D L+P+ L + + V +ACG HV +T G+V
Sbjct: 234 EVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALVTR-----QGEV 288
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG S G+LGHG D P V F + + ++ G H+ VS SG LFT GDG
Sbjct: 289 FTWGEESGGRLGHGIDNDFSRPHLVEFLAVN--NVDFVACGEYHTCAVSTSGDLFTWGDG 346
Query: 154 TF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
T G LGHG SH P +VS V +ACG HS + + +++ FG G
Sbjct: 347 THNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSN---GKLFTFGDGTF 403
Query: 211 GQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANGDRSAALSAEG------HLYTWG 260
G LG DR SV P Q+ GL I++ G+ +S G L+TWG
Sbjct: 404 GVLG-HGDR-ESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWG 461
Query: 261 RGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G ++ LP+ +S F Q A G + LT G V +GG+ +G L
Sbjct: 462 DGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQLG 521
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+P +S R + +K L G V +I+ GA H AV+T + TWG G +G+LG G+
Sbjct: 522 NP--LSDGRLPCLVQDK---LVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGD 576
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
T D+ P V + ++R+ + + CGS FT +I H
Sbjct: 577 TEDRRSPTFV---EALKDRNVK-SISCGSNFTASICIH 610
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + LACG +ALT+ G VF
Sbjct: 456 KLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTT-----SGHVF 510
Query: 95 SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G + GQLG+ G + + K V F + IS G H ++ +FT
Sbjct: 511 TMGGTAYGQLGNPLSDGRLPCLVQDKLVGEF------VEEISCGAYHVAVLTSRSEVFTW 564
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
G G G+LGHGD SP V + ++NV I+CG + + C+ V G
Sbjct: 565 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI---CIHKWVSGADQSVC 621
Query: 207 SGKRGQLGVSKDR 219
SG R G ++ R
Sbjct: 622 SGCRQAFGFTRKR 634
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 174/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ ++S+V +ACG H +T+ G ++
Sbjct: 245 EVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA-----SGDLY 299
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG GS +G LGHG V PK V+ +G + ++ G HS SG LFT G
Sbjct: 300 DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG--LQVLSVACGSWHSALTMSSGKLFTFG 357
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD S + P +V + ++ACG+ HS +++ + + +++
Sbjct: 358 DGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFT 417
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GD+ A L
Sbjct: 418 WGDGDKNRLG----------------------------HGDKEAKLVP------------ 437
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L +F Q A G + + L G V +G S++G L +P + +P
Sbjct: 438 -----TCVQALVDH-NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNP-KADGKQPCM 490
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L V +I+ G+ H A +T + TWG G +G+LG G+ D+ P +V
Sbjct: 491 VQ----DKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLV-- 544
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
D ++R + + CGS FT I H
Sbjct: 545 -DALKDRHVK-SISCGSNFTTCICIH 568
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +AL + G VF
Sbjct: 414 KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALAT-----SGHVF 468
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G ++GQLG+ + D P V G+ + IS G NH ++ ++T G G
Sbjct: 469 TMGSSNNGQLGNPK-ADGKQPCMVQDKLGNEL-VEEISCGSNHVAALTSRSEVYTWGMGA 526
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
G+LGHG P V + +++V I+CG + + C+ V G SG R
Sbjct: 527 NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI---CIHKWVSGADQSVCSGCR 583
Query: 211 GQLGVSKDR 219
G ++ R
Sbjct: 584 QPFGFTRKR 592
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 110/297 (37%), Gaps = 81/297 (27%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
I+ G H G + G +FT G+ G+LGHG P V S NV IACG H
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFH 288
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
+ V+ +Y +G G GVS + VS P L ++++ ++
Sbjct: 289 TCVVTA---SGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-----LEGLQVLSVACG 340
Query: 244 GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
SA + G L+T+G G
Sbjct: 341 SWHSALTMSSGKLFTFGDG---------------------------------------TF 361
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE---------- 353
G HG +R S P ++V L G + +++A G HSA + E
Sbjct: 362 GSLGHG-----DRESVAYP-----KEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAM 411
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 408
+R + TWG G+ +LG G+ ++ P V + F +V CG T A++
Sbjct: 412 SRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH------QVACGHSMTVALA 462
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 163/377 (43%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 2965 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3019
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I I+ G +HS +S G L+T G
Sbjct: 3020 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGELYTWGL 3077
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ V Q+ACG R +L L +D V+ +G G
Sbjct: 3078 GEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3134
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + + P L I +V I S AL+ G ++TWG+G
Sbjct: 3135 GKLG--RGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG-------- 3184
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H V +P +
Sbjct: 3185 --------------------------DYYRLGHGGDQH--------VRKPQP-------I 3203
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
+ L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3204 AGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3263
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3264 NR-----VACGSSHSMA 3275
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+LL + SV+ +ACG AH A+T+ G V
Sbjct: 4177 EVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITA-----SGHVL 4231
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4232 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4291
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4292 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4348
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4349 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4392
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 141/336 (41%), Gaps = 67/336 (19%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK + +G ++ I+ G
Sbjct: 4165 GGKHCLALTT-----DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNG--MSVADIACG 4217
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4277
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 4278 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4332
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4333 SGAVYTWGKG----------------------------------DFHRLGHGSVDH---- 4354
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +KV+ L G K+I IA G+ H ++ + TWG + GQLG G
Sbjct: 4355 ------VRRP-----KKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGT 4403
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V Q + ++V CGS T A+S
Sbjct: 4404 VTAIQRPRLVA---ALQGKHI-VKVTCGSAHTLALS 4435
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G + +LG G H P + S + V + CG ++ A+T + G +++W
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELPTKIE-SLVRRVKSVYCGCSYSAAIT-----LRGNLYTW 716
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ G+LGHG D P V H+ + +G H+ +++ G ++ GDG +G
Sbjct: 717 GRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYG 776
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+ S P+ + V ++ G + SL L + Q+Y +G +
Sbjct: 777 KLGNASCNSSLQPLLIECL--PRVQRVFAGSQFSLALTGE---GQLYSWGKASCLGHQLV 831
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ ALS+ G ++ WGR N CP S+
Sbjct: 832 ERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI---CPASVC 888
Query: 277 SSLSFSQAAL 286
S Q L
Sbjct: 889 SEPLLRQPIL 898
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + RI++ + + L +++ G G++S A++ +G L+
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4127
Query: 260 GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
G G V S +P+ L Q G H L LT DGEV G G
Sbjct: 4128 GYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4187
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R+S RP + + +L+G+ V IA G+ HSA +T + ++TWG G +G+LG
Sbjct: 4188 KLGHGNRLSYDRP-----KLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLG 4242
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4243 HGDSEDQLRPKLVEALLGYR----AIDIACGSG 4271
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 57/371 (15%)
Query: 22 PKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLA 81
P + +E++ V SW + + P LLN V +AC VL
Sbjct: 561 PTLSKEQQGFNVEPALSWTSAST---------QRPPPALLNCKF--HVKQVACSKDIVLL 609
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF- 140
L+ GK+++W H D P+P+ F D T I++ F
Sbjct: 610 LSKE-----GKLYNW---------HISKPDT-EPQPLDFGDIGSETFISIASHCEGRHFL 654
Query: 141 -VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
V ++ ++ G G +LGHGD S P K+ S V + V + CG +S + L
Sbjct: 655 AVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAAI---TLR 710
Query: 200 NQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGIS-ANGD-RSAALSAEGH 255
+Y +G G G+LG +S D+ LP + + L D ++V ++ +GD + L+ EG
Sbjct: 711 GNLYTWGRGNYGRLGHGISDDQC----LPTMVMALKDHQVVDVALGSGDAHTLCLTNEGL 766
Query: 256 LYTWGRG-FNSTSDVNCPQSLPSSL-----SFSQAALGWNHVLVLTGDGEVLMLGGS--- 306
+Y WG G + + +C SL L + G L LTG+G++ G +
Sbjct: 767 VYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQRVFAGSQFSLALTGEGQLYSWGKASCL 826
Query: 307 -HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
H + + + S R +++L +++ +A G H ++ I WG ++
Sbjct: 827 GHQLVERNVQGCSVPR-------LITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDN 879
Query: 366 GQLGLGNTCDQ 376
Q+ + C +
Sbjct: 880 QQICPASVCSE 890
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 136/307 (44%), Gaps = 34/307 (11%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF-VSDSGCLFTCG 151
++ WG GQLG E P P R AG S F V+ G LF G
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQL---AGGEQSLFAVTPDGKLFATG 4128
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGK 209
G+ G+LG G S S P + S + V ++A G +H L L D +VY +G G+
Sbjct: 4129 YGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD---GEVYAWGEGE 4185
Query: 210 RGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
G+LG +S DR P++ L+ + + I+ SAA++A GH+ TWG+G
Sbjct: 4186 DGKLGHGNRLSYDR------PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4239
Query: 263 ---FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ D P+ + + L + + G L +T D V G +G L
Sbjct: 4240 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4299
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
P K+ +L G+ VI++ G++ S +T++ A+ TWG G+ +LG G+
Sbjct: 4300 SDGCKLPY-----KIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4354
Query: 376 QIHPKVV 382
PK V
Sbjct: 4355 VRRPKKV 4361
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S +S +G ++
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFVVSQDGKVFAC 2969
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ IA G+ HSA ++ + TWG GE+G+LG
Sbjct: 3030 KLGHGNRTTLDKP-----RLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG 3084
Query: 370 LGNTCDQIHPKVVN 383
G+ Q+ PK+V
Sbjct: 3085 HGDNATQLKPKLVT 3098
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 160/377 (42%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 785 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 839
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 840 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 897
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 898 GEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 954
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I +V I S AL+ G ++TWG+G
Sbjct: 955 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG-------- 1004
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H P +
Sbjct: 1005 --------------------------DYYRLGHGGDQHVRKPQP---------------I 1023
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 1024 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 1083
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 1084 NR-----VACGSSHSIA 1095
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 137/296 (46%), Gaps = 33/296 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+T+ G V
Sbjct: 1904 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 1958
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 1959 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 2018
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 2019 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS---GAVYTWGKGDFHRLG 2075
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
S D +R P+ L +I+ I+ A S G +YTWG G + +
Sbjct: 2076 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 2132
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ P+ + AAL H++ +T G +H LS + RPL
Sbjct: 2133 AIQRPRLV--------AALQGKHIVKVT-------CGSAHTLALSTSQLSERLRPL 2173
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 1892 GGKHCLALTTE-----GEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 1944
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + +V + S AL+
Sbjct: 2005 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 2059
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 2060 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 2119
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 2120 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 2165
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 162/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 1799 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 1853
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 1854 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 1913
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 1914 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITAS---GHVLTWGKGRYGRLGH 1970
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 1971 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 2028
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 2029 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 2085
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 2086 --KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 2141
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 2142 -ALQGKHI-VKVTCGSAHTLALS 2162
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + S +G +Y
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 789
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 850 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 904
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V R ++V CGS
Sbjct: 905 HGDNATQLKPKLVT---ALAGRRV-VQVACGS 932
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 174/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ ++S+V +ACG H +T+ G ++
Sbjct: 281 EVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA-----SGDLY 335
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG GS +G LGHG V PK V+ +G + ++ G HS SG LFT G
Sbjct: 336 DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG--LQVLSVACGSWHSALTMSSGKLFTFG 393
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD S + P +V + ++ACG+ HS +++ + + +++
Sbjct: 394 DGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFT 453
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GD+ A L
Sbjct: 454 WGDGDKNRLG----------------------------HGDKEAKLVP------------ 473
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L +F Q A G + + L G V +G S++G L +P + +P
Sbjct: 474 -----TCVQALVDH-NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNP-KADGKQPCM 526
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L V +I+ G+ H A +T + TWG G +G+LG G+ D+ P +V
Sbjct: 527 VQ----DKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLV-- 580
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
D ++R + + CGS FT I H
Sbjct: 581 -DALKDRHVK-SISCGSNFTTCICIH 604
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +AL + G VF
Sbjct: 450 KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALAT-----SGHVF 504
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G ++GQLG+ + D P V G+ + IS G NH ++ ++T G G
Sbjct: 505 TMGSSNNGQLGNPK-ADGKQPCMVQDKLGNEL-VEEISCGSNHVAALTSRSEVYTWGMGA 562
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
G+LGHG P V + +++V I+CG + + C+ V G SG R
Sbjct: 563 NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI---CIHKWVSGADQSVCSGCR 619
Query: 211 GQLGVSKDR 219
G ++ R
Sbjct: 620 QPFGFTRKR 628
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 127/348 (36%), Gaps = 100/348 (28%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
G V+ WG GSS L D L PKP+ D + I+ G H
Sbjct: 221 GDVYVWGEVWTEVLPSEGSSNYLC--SKTDFLIPKPLESDVVLD-----VQQIACGSRHI 273
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
G + G +FT G+ G+LGHG P V S NV IACG H+ V+
Sbjct: 274 GLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA--- 330
Query: 199 GNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+Y +G G GVS + VS P L ++++ ++ SA +
Sbjct: 331 SGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-----LEGLQVLSVACGSWHSALTMS 385
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G L+T+G G G HG
Sbjct: 386 SGKLFTFGDG---------------------------------------TFGSLGHG--- 403
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGW 362
+R S P ++V L G + +++A G HSA + E +R + TWG
Sbjct: 404 --DRESVAYP-----KEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGD 456
Query: 363 GEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 408
G+ +LG G+ ++ P V + F +V CG T A++
Sbjct: 457 GDKNRLGHGDKEAKLVPTCVQALVDHNFH------QVACGHSMTVALA 498
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 174/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ ++S+V +ACG H +T+ G ++
Sbjct: 295 EVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA-----SGDLY 349
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG GS +G LGHG V PK V+ +G + ++ G HS SG LFT G
Sbjct: 350 DWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG--LQVLSVACGSWHSALTMSSGKLFTFG 407
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD S + P +V + ++ACG+ HS +++ + + +++
Sbjct: 408 DGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFT 467
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GD+ A L
Sbjct: 468 WGDGDKNRLG----------------------------HGDKEAKLVP------------ 487
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L +F Q A G + + L G V +G S++G L +P + +P
Sbjct: 488 -----TCVQALVDH-NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNP-KADGKQPCM 540
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L V +I+ G+ H A +T + TWG G +G+LG G+ D+ P +V
Sbjct: 541 VQ----DKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLV-- 594
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
D ++R + + CGS FT I H
Sbjct: 595 -DALKDRHVK-SISCGSNFTTCICIH 618
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +AL + G VF
Sbjct: 464 KLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALAT-----SGHVF 518
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G ++GQLG+ + D P V G+ + IS G NH ++ ++T G G
Sbjct: 519 TMGSSNNGQLGNPK-ADGKQPCMVQDKLGNEL-VEEISCGSNHVAALTSRSEVYTWGMGA 576
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
G+LGHG P V + +++V I+CG + + C+ V G SG R
Sbjct: 577 NGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI---CIHKWVSGADQSVCSGCR 633
Query: 211 GQLGVSKDR 219
G ++ R
Sbjct: 634 QPFGFTRKR 642
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 127/348 (36%), Gaps = 100/348 (28%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
G V+ WG GSS L D L PKP+ D + I+ G H
Sbjct: 235 GDVYVWGEVWTEVLPSEGSSNYLC--SKTDFLIPKPLESDVVLD-----VQQIACGSRHI 287
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
G + G +FT G+ G+LGHG P V S NV IACG H+ V+
Sbjct: 288 GLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTA--- 344
Query: 199 GNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+Y +G G GVS + VS P L ++++ ++ SA +
Sbjct: 345 SGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGP-----LEGLQVLSVACGSWHSALTMS 399
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G L+T+G G G HG
Sbjct: 400 SGKLFTFGDG---------------------------------------TFGSLGHG--- 417
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGW 362
+R S P ++V L G + +++A G HSA + E +R + TWG
Sbjct: 418 --DRESVAYP-----KEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGD 470
Query: 363 GEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 408
G+ +LG G+ ++ P V + F +V CG T A++
Sbjct: 471 GDKNRLGHGDKEAKLVPTCVQALVDHNFH------QVACGHSMTVALA 512
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 177/388 (45%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D P L+ ++++V+ +ACG H A++S G +F
Sbjct: 323 EVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSS-----SGDLF 377
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK V+ +G + ++ G HS + +G LFT G
Sbjct: 378 TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG--LQVVSVACGTWHSALATSNGKLFTIG 435
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG FG LGHGD S + P +V ++ACG+ HS +
Sbjct: 436 DGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAI------------------ 477
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------FN 264
IE++G S + ++ L+TWG G N
Sbjct: 478 -----------------------IEVMGPSGSN------TSAKRLFTWGDGDQYRLGHVN 508
Query: 265 STS--DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + C ++ + +F Q A G+ + LT G V +GG+ +G L +P P
Sbjct: 509 KETYLEPTCVAAV-AEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKV-P 566
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V L G V +I+ GA H AV+T + TWG G +G+LG G+T DQ P +V
Sbjct: 567 ILVR----GKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMV 622
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 623 ---EALKDRHIK-NISCGSTFTSCICLH 646
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 182/388 (46%), Gaps = 75/388 (19%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G+LG G + P+L+ S +V ++ACG H A+T+ G +
Sbjct: 282 AEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTAT-----GDL 336
Query: 94 FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ +G LGHG V PK V+ DG ++ +S G H+ ++ SG L+T
Sbjct: 337 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDG--LPVSAVSCGTWHTALITSSGQLYTF 394
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYG 204
GDGTFG LGHG+ S S P +V S ++CG+ H+ +++ + +++
Sbjct: 395 GDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFT 454
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GDRS+ L
Sbjct: 455 WGDGDKYRLG----------------------------HGDRSSKLK------------- 473
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P +PS +F +AA G + LT G + +G +G L +P + R
Sbjct: 474 -------PTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPN--NDGRY 524
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ E+ L G V+++A G+ H AV+T + TWG G +G+LG G+ D+ KV
Sbjct: 525 PRLVEEQ---LGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADR---KVP 578
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + V CGS FT AI +H
Sbjct: 579 TLVEALKDRSVK-RVACGSSFTAAICQH 605
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 161/324 (49%), Gaps = 28/324 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
+KVS LDG+ + QI+AG HS
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHS 730
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3653 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 3707
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 3708 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 3756
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 3757 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 3814
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 3815 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 3870
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 3871 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 3930
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 3931 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTV-----VTGLQGKN 3985
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 3986 VRQISAGRCHSAAWT 4000
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3640 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 3690
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 3691 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3750
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 3751 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 3807
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 3808 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 3866 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 3923
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P VV
Sbjct: 3924 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVT 3979
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3634 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 3685
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 3742
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 3743 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 3778
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 3779 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 3815
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 3816 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 3870
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 3871 PQKIDVLCGIGIK----KVACGTQFSVALTK 3897
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G +G+LG G + P+++ + + G LALTS G+V++
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS-----TGQVYA 637
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+ G E AL PK + R I +S G +H +S ++ G+ +
Sbjct: 638 WGCGACLGCGSSEAT-ALRPKLIEELAATR--IVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G G+ + P KVS + QI+ G HSL
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 178/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 330 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 384
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+S G LGHG V PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 385 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 442
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 443 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 502
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ L
Sbjct: 503 FTWGDGDKGRLG----------------------------HGDKDTRLVP---------- 524
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + LT G V +G +G L +P+ P
Sbjct: 525 -------TCVAALVEP-NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ-ADGMLP 575
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 576 VRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLV 631
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 632 EALKDKQVR----TVVCGINFTAAICIH 655
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G L P + + +ACG +ALT+ G V+
Sbjct: 501 KIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTT-----SGHVY 555
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D + P V +G H+ + IS G H ++ ++T G
Sbjct: 556 TMGSPVYGQLGNPQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 611
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G G+LGHGD SSP V + +K V + CG+ + + C+ V G
Sbjct: 612 GANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAI---CIHKWVSG 660
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 124/316 (39%), Gaps = 73/316 (23%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +D L PKP+ F + + +IS G H+ V+ G +++ G+ + G+LGHG
Sbjct: 293 GVNMDCLIPKPLEF--AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
P + + N N+ +ACG H+ + L +Y +G+G G LG + V
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVT---LSGDLYTWGNGTSNSGLLGHGNEVSHWVP 407
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
+V L I + IS +A +++ G L+T+
Sbjct: 408 -KRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTF------------------------- 441
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
GDG +LG LS P V S L G++ ++ A G
Sbjct: 442 -----------GDGSFGVLGHGDRQSLSVPREVES-------------LKGLRTVRAACG 477
Query: 345 AEHSAVVTE------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
H+A V E + I TWG G+ G+LG G+ ++ P V E
Sbjct: 478 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE----P 533
Query: 393 TQLEVFCGSGFTYAIS 408
++ CG T A++
Sbjct: 534 NFCQIACGHCMTVALT 549
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 178/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 376 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 430
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+S G LGHG V PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 431 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 488
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 489 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 548
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ L
Sbjct: 549 FTWGDGDKGRLG----------------------------HGDKDTRLVP---------- 570
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + LT G V +G +G L +P+ P
Sbjct: 571 -------TCVAALVEP-NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ-ADGMLP 621
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 622 VRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLV 677
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 678 EALKDKQVR----TVVCGINFTAAICIH 701
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 124/316 (39%), Gaps = 73/316 (23%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +D L PKP+ F + + +IS G H+ V+ G +++ G+ + G+LGHG
Sbjct: 339 GVNMDCLIPKPLEF--AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 396
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
P + + N N+ +ACG H+ + L +Y +G+G G LG + V
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVT---LSGDLYTWGNGTSNSGLLGHGNEVSHWVP 453
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
+V L I + IS +A +++ G L+T+
Sbjct: 454 -KRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTF------------------------- 487
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
GDG +LG LS P V S L G++ ++ A G
Sbjct: 488 -----------GDGSFGVLGHGDRQSLSVPREVES-------------LKGLRTVRAACG 523
Query: 345 AEHSAVVTE------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
H+A V E + I TWG G+ G+LG G+ ++ P V E
Sbjct: 524 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE----P 579
Query: 393 TQLEVFCGSGFTYAIS 408
++ CG T A++
Sbjct: 580 NFCQIACGHCMTVALT 595
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 164/377 (43%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3098 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3152
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I I+ G +HS +S G L+T G
Sbjct: 3153 VFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGELYTWGL 3210
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3211 GEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3267
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + + P L I ++ I S AL+ G ++TWG+G
Sbjct: 3268 GKLG--RGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG-------- 3317
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H V +P +
Sbjct: 3318 --------------------------DYYRLGHGGDQH--------VRKPQP-------I 3336
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
+ L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3337 AGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3396
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3397 NR-----VACGSSHSMA 3408
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+LL + SV+ +ACG AH A+T+ G V
Sbjct: 4306 EVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITA-----SGHVL 4360
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4361 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4420
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4421 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4477
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4478 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4521
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK + +G ++ I+ G
Sbjct: 4294 GGKHCLALTT-----DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNG--MSVADIACG 4346
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 4407 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4461
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4462 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWG 4521
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4522 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4567
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 14/247 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G +LG G H P + S + V + CG ++ A+T + G +++W
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIE-SLVRRVQSVYCGCSYSAAIT-----LRGNLYTW 692
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ G+LGHG D P V H+ + +G H+ ++ G ++ GDG +G
Sbjct: 693 GRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYG 752
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G S P+ + V ++ G + SL L C G Q+Y +G +
Sbjct: 753 KLGNGSCNSSLQPLLIECL--PRVQRVFAGSQFSLAL--TCEG-QLYSWGKASCLGHQLV 807
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ ALS+ G ++ WGR N CP S+
Sbjct: 808 ERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI---CPASVC 864
Query: 277 SSLSFSQ 283
S Q
Sbjct: 865 SEPLLRQ 871
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + RI++ + + L I++ G G++S A++ +G L+
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAG----GEQSLFAVTPDGKLFAT 4256
Query: 260 GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
G G V S +P+ L Q G H L LT DGEV G G
Sbjct: 4257 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4316
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R+S RP + + +L+G+ V IA G+ HSA +T + ++TWG G +G+LG
Sbjct: 4317 KLGHGNRMSYDRP-----KLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLG 4371
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ D + CGSG
Sbjct: 4372 HGDSEDQLRPKLVEALLGYRAID----IACGSG 4400
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 161/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4201 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTP-----DGKLFA 4255
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4256 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGED 4315
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P + +V IACG HS + V +G G+ G+L
Sbjct: 4316 GKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4372
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4373 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4430
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4431 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4487
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H ++ + TWG + GQLG G P++V
Sbjct: 4488 --KKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 4543
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4544 -ALQGKHI-VKVTCGSAHTLALS 4564
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S +S +G +Y
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFVVSQDGKVYAC 3102
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ IA G+ HSA ++ + TWG GE+G+LG
Sbjct: 3163 KLGHGNRSTLDKP-----RLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG 3217
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V R ++V CGS
Sbjct: 3218 HGDNATQLKPKLVT---ALHGRRV-IQVACGS 3245
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 149/382 (39%), Gaps = 57/382 (14%)
Query: 20 AKPKIEEEEEEQQVVKVWSWGAGTDGQLG---------TGRLHDELSPQLLNLSSLSSVS 70
A P EQQ V W A + Q G T + P LL +
Sbjct: 517 ATPNTASTILEQQRVYALGWPALSKEQQGFNVEPALSWTSAATQQPPPALLTCKF--QLK 574
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
+AC V+ L GK+++W P+ + F + T
Sbjct: 575 QVACSEDMVVLLCQE-----GKLYNWPIAKP----------ETEPQLLDFAEIANETFVS 619
Query: 131 ISAGWNHSGF--VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
I+A F V + ++ G G +LGHGD + P K+ S V + V + CG
Sbjct: 620 IAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCS 678
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGIS-ANGD 245
+S + L +Y +G G G+LG S D+ +P + + L D +++ ++ +GD
Sbjct: 679 YSAAI---TLRGNLYTWGRGTYGRLGHGNSDDQ----CMPAMVMALKDHQVLDVALGSGD 731
Query: 246 -RSAALSAEGHLYTWGRG-FNSTSDVNCPQSLPSSL-----SFSQAALGWNHVLVLTGDG 298
+ L+ G +Y WG G + + +C SL L + G L LT +G
Sbjct: 732 AHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEG 791
Query: 299 EVLMLGGS----HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
++ G + H + + + S R +++L +++ +A G H ++ N
Sbjct: 792 QLYSWGKASCLGHQLVERNVQGCSVPR-------LITSLQHKRIVHVAVGVAHCLALSSN 844
Query: 355 RAIMTWGWGEHGQLGLGNTCDQ 376
I WG ++ Q+ + C +
Sbjct: 845 GEIFGWGRNDNQQICPASVCSE 866
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 26/172 (15%)
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
++ ++ + D L EG LY W + P++ P L F++ A N V
Sbjct: 571 FQLKQVACSEDMVVLLCQEGKLYNW--------PIAKPETEPQLLDFAEIA---NETFVS 619
Query: 295 TG---DGEVLMLGGSHHGMLS----DPERV----SSTRPLSVALEKVSNLDGVKVIQIAA 343
+G + S+H S D R+ R L +E + +V +
Sbjct: 620 IAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR----RVQSVYC 675
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
G +SA +T + TWG G +G+LG GN+ DQ P +V + Q D L
Sbjct: 676 GCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVAL 727
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 173/387 (44%), Gaps = 73/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D PQL+ + +SV +ACG H A+T + G+++
Sbjct: 297 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVT-----MTGEIY 351
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK ++ +G I +S G H+ ++ +G LFT G
Sbjct: 352 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG--LQIASVSCGPWHTALITSTGQLFTFG 409
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD + P +V S +ACG+ H+ +++ + SGK
Sbjct: 410 DGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGK-- 467
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----- 266
L+TWG G S
Sbjct: 468 --------------------------------------------LFTWGDGDKSRLGHGD 483
Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ + S+L +F + A G + + LT G+V +G + +G L +P P
Sbjct: 484 KESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPC 542
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V + + + V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 543 LVEDKLIKDC----VEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLV- 597
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
D + R + + CGS FT AI H
Sbjct: 598 --DTLKERHVK-NIACGSNFTAAICLH 621
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 132/322 (40%), Gaps = 86/322 (26%)
Query: 107 GEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
G D L PKP+ D H HI+ G H+ VS G +FT G+ + G+LGHG
Sbjct: 260 GSRSDVLIPKPLESNVVLDVH-----HIACGVRHAALVSRQGEVFTWGEASGGRLGHGMG 314
Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIR 221
+ + P + S +V +ACG H+ + + ++Y +G G G LG D
Sbjct: 315 KDVTGPQLIESLAATSVDFVACGEFHTCAVT---MTGEIYTWGDGTHNAGLLGHGTD--- 368
Query: 222 SVS--LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSS 278
VS +P+ G L ++I +S +A +++ G L+T+
Sbjct: 369 -VSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTF------------------- 408
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
GDG +LG HG D E V R +V +L G++
Sbjct: 409 -----------------GDGTFGVLG---HG---DKETVFYPR-------EVESLSGLRT 438
Query: 339 IQIAAGAEHSAVVTE-----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGD 386
I +A G H+A + E + + TWG G+ +LG G+ ++ P V+ L D
Sbjct: 439 IAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID 498
Query: 387 EFQNRDTQLEVFCGSGFTYAIS 408
+R V CG T ++
Sbjct: 499 HTFHR-----VACGHSLTVGLT 515
>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 1106
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 187/398 (46%), Gaps = 43/398 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VWS G DG + + + D L P+ L + + V +ACG H+ +T G+V
Sbjct: 237 EVWSDGISPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQ-----GEV 291
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+W + G+LGHG VD PK V F I ++ G H+ VS SG LFT GDG
Sbjct: 292 FTWEEEAGGRLGHGIQVDVCRPKLVEFLA--LTNIDFVACGEYHTCAVSTSGDLFTWGDG 349
Query: 154 --TFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LGHG SH P +VS V V +ACG HS + + +++ FG G
Sbjct: 350 IHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 406
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEI-------VGISANGDRSAALSAEGHLYTWG 260
G LG DR SVS P+ + GL +++ V I +++ ++ L+TWG
Sbjct: 407 GVLG-HGDR-ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWG 464
Query: 261 RGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G + ++ LP+ +S F+Q A G + LT G V +GG+ HG L
Sbjct: 465 DGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSHGQLG 524
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
SS + L G V +I+ G H AV+T + TWG G +G+LG G+
Sbjct: 525 -----SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGD 579
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
D+ P +V + + R + + CGS FT +I H
Sbjct: 580 KDDRKTPTLV---EALRERHVK-SISCGSNFTSSICIH 613
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 22/193 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + + +ACG +ALT+ G VF
Sbjct: 459 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTT-----SGHVF 513
Query: 95 SWGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G S GQLG G++ + + V F + IS G +H ++ +FT
Sbjct: 514 TMGGTSHGQLGSSNSDGKLPCLVQDRLVGEF------VEEISCGDHHVAVLTSRSEVFTW 567
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
G G+ G+LGHGD +P V + ++V I+CG + + C+ V G
Sbjct: 568 GKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSI---CIHKWVSGADQSVC 624
Query: 207 SGKRGQLGVSKDR 219
SG R G ++ R
Sbjct: 625 SGCRQAFGFTRKR 637
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 162/377 (42%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 1885 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 1939
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 1940 VFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKK--IRDVACGSSHSAAISSQGELYTWGL 1997
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 1998 GEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTED---GSVFSWGDGDF 2054
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I ++ I S AL+ G ++TWG+G
Sbjct: 2055 GKLG--RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG-------- 2104
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H V +P +
Sbjct: 2105 --------------------------DYYRLGHGGDQH--------VRKPQP-------I 2123
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 2124 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 2183
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 2184 NR-----VACGSSHSIA 2195
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + +V+ +ACG AH A+T+ G V
Sbjct: 3084 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA-----SGHVL 3138
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L P+ V G+R +G + ++D +++ GDG
Sbjct: 3139 TWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 3198
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY + G +LG
Sbjct: 3199 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWSKGDFHRLG 3255
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 3256 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 3299
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G + I+ G
Sbjct: 3072 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MNVADIACG 3124
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 3184
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 3185 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 3239
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTW +G S V P+ + + A G H + + GEV G
Sbjct: 3240 SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 3299
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 3300 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 3345
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 161/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 2979 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 3033
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 3034 TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 3093
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V NV IACG HS + V +G G+ G+L
Sbjct: 3094 GKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 3150
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 3151 GDSEDQLRP-QLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 3208
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V L RP
Sbjct: 3209 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRP--- 3265
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 3266 --KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 3321
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 3322 -ALQGKHI-VKVTCGSAHTLALS 3342
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + + G +Y
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVGQNGKVYAC 1889
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 1950 KLGHGNRTTLDKP-----RLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 2004
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V R ++V CGS
Sbjct: 2005 HGDNATQLKPKLVA---ALAGRRV-IQVACGS 2032
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 164/377 (43%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K+++ G GT+G+LG G ++ P+ + S + +A GG H LALT GK
Sbjct: 3065 KLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQ-----DGK 3119
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG + PK + R I I+ G HS ++ +G L+T G
Sbjct: 3120 VFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKR--IRDIACGSGHSAAIASNGELYTWGL 3177
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + + P V + + V Q+ACG R ++ L D VY +G G
Sbjct: 3178 GEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTD---GYVYSWGDGDF 3234
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P + L+++ ++ + S AL+ G ++TWG+
Sbjct: 3235 GKLG--RGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGK--------- 3283
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
GD L G HH + P V R
Sbjct: 3284 -------------------------GDYFRLGHGNDHH--VRKPTLVEGLR--------- 3307
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQ 389
G K+I +A GA H VT+ + WG +HGQ G G T P +V +L D
Sbjct: 3308 ----GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARV 3363
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3364 NR-----VSCGSSHSIA 3375
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 147/326 (45%), Gaps = 29/326 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K++S G G G+LG G + P LL + +A GG H +AL+S G
Sbjct: 4047 KIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE-----GH 4101
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG V Y +P D I I+ G +HS ++ +G L+T G
Sbjct: 4102 VYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD P V + + V +ACG +L + D + V+ +G G
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4216
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NS 265
G+LG + +P L + +V + S AL+ G +YTWG+G +
Sbjct: 4217 GKLG--RGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274
Query: 266 TSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
T D V P+ + + A G H + + GEV G + G L D + RP
Sbjct: 4275 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRP 4334
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
V L G K+ ++A G+ H+
Sbjct: 4335 -----RLVHALQGKKITRVACGSAHT 4355
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G P+L+ ++ +ACG + AL++ G++++
Sbjct: 589 VYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAALSA-----NGELYT 643
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF--VSDSGCLFTCGDG 153
WGRG+ G+LGHG D + P VT GH T+ H++ G S V+ SG +F+ GDG
Sbjct: 644 WGRGNYGRLGHGNFDDVMTPTLVTTLKGH--TVVHVACGSGDSQTLCVTASGIVFSWGDG 701
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G +L
Sbjct: 702 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAH---GEVYTWGKGDAYRL 758
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + V P+V L D ++ +S AL+ + +Y WGR
Sbjct: 759 GHGSE--EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGR 804
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 172/386 (44%), Gaps = 35/386 (9%)
Query: 36 VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ WG GQLG +L +LS+L + LA G + A+T+ GK++
Sbjct: 3996 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQ-LAGGEQTLFAVTA-----DGKIY 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G G++G+LG G + P + +S+G H +S G +++ G+G
Sbjct: 4050 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGD 4109
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
G+LGHG+ S+ P + + + IACG HS + +Y +G G+ G+L
Sbjct: 4110 DGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITS---AGWLYTWGKGRYGRLG 4166
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTW--------GRG 262
G S D++R P+V L D +++ ++ +GD ++ ++ + ++++W GRG
Sbjct: 4167 HGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4222
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ V + L + G + LT G V G + L RP
Sbjct: 4223 GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRP 4282
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV+ L G K+I IA G+ H ++ + TWG + GQLG G T P++V
Sbjct: 4283 -----RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4337
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ Q + V CGS T A S
Sbjct: 4338 H---ALQGKKIT-RVACGSAHTLAWS 4359
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R ++ G V+ G +++
Sbjct: 3994 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALR--PIQLAGGEQTLFAVTADGKIYST 4051
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + + ++A G +H + L + VY +G G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE---GHVYSWGEG 4108
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG VS DR P++ L +EIV I+ G SAA+++ G LYTWG+
Sbjct: 4109 DDGKLGHGNKVSYDR------PKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY 4162
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 4163 GRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4222
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
PL K+ +L G+ V+++ G++ S +T + A+ TWG G++ +LG G
Sbjct: 4223 GSDGCKVPL-----KIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4277
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4278 HVRRPRKV 4285
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 12/216 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G D ++P L+ +V +ACG L +S G VF
Sbjct: 640 ELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTAS---GIVF 696
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWG G G+LG G + PK V D + + G S ++ G ++T G G
Sbjct: 697 SWGDGDYGKLGRGGTDGSKTPKIVDKLLD---INVVKVFCGSQFSAALTAHGEVYTWGKG 753
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+LGHG P + S ++ V ++ G H L L +D VYG+G GQ+
Sbjct: 754 DAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQF---VYGWGRNDYGQI 810
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+ I +S P + L ++G+++ +S A
Sbjct: 811 DPTLGPI--ISEPTLCPTLSSKTVIGLASGPTQSFA 844
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 37/311 (11%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ L C ++ L+ + G V++ GS Q + + V KP+T H
Sbjct: 526 IKQLCCTERALMILS-----LNGNVYNMYHGSETQ--YPQRVHGFSDKPITMIASH---- 574
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
A H ++ GC+++ G+G G+LGHGD S+ P + + + KN+ IACG
Sbjct: 575 ----ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGST 630
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDR 246
+S L + ++Y +G G G+LG V P + L H + V + +
Sbjct: 631 YSAALSAN---GELYTWGRGNYGRLG--HGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQ 685
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDG 298
+ ++A G +++WG G T P+ + L + + G LT G
Sbjct: 686 TLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 745
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAI 357
EV G D R+ V KV +L KV ++ G H +TE++ +
Sbjct: 746 EVYTWGK------GDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFV 799
Query: 358 MTWGWGEHGQL 368
WG ++GQ+
Sbjct: 800 YGWGRNDYGQI 810
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 26/244 (10%)
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSG 208
+G + HG + P +V F +K + IA +H L L +D C VY +G+G
Sbjct: 542 NGNVYNMYHGSETQY--PQRVHGFSDKPITMIASHADGKHYLALTQDGC----VYSWGNG 595
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
G+LG D I S P++ L + I+ I+ SAALSA G LYTWGRG
Sbjct: 596 DGGRLG-HGDTI-SYDEPKLIEALLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLG 653
Query: 263 FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ DV P + + ++ G + L +T G V G +G L
Sbjct: 654 HGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDG 713
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
S P + V L + V+++ G++ SA +T + + TWG G+ +LG G+ +
Sbjct: 714 SKTP-----KIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRY 768
Query: 379 PKVV 382
PKV+
Sbjct: 769 PKVI 772
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 36/256 (14%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S+P + + Q+ C R ++L L VY G Q P
Sbjct: 513 STPFYCDAIAELGIKQLCCTERALMIL---SLNGNVYNMYHGSETQY------------P 557
Query: 227 QVTIGLHDIEIVGIS--ANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
Q G D I I+ A+G AL+ +G +Y+WG G T + P+ + +
Sbjct: 558 QRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEAL 617
Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
L + A G + L+ +GE+ G ++G L P V+ L G
Sbjct: 618 LEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTP-----TLVTTLKGH 672
Query: 337 KVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V+ +A G+ + VT + + +WG G++G+LG G T PK+V D+ + +
Sbjct: 673 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIV---DKLLDINV- 728
Query: 395 LEVFCGSGFTYAISRH 410
++VFCGS F+ A++ H
Sbjct: 729 VKVFCGSQFSAALTAH 744
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 179/378 (47%), Gaps = 40/378 (10%)
Query: 35 KVWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG + GQLG G + +P+ + S + M++CGG H +A+ +
Sbjct: 1052 ELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQ-----SFQ 1106
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++SWG GQLGHG + PK + F G + + I+ G+ H+ + SG LFT G
Sbjct: 1107 IYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLA-IATGYAHTMVLKKSGDLFTFGW 1165
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVH-----QIACGMRHSLVLLKDCLGN-QVYGFG 206
GQLG G++++ + P+++ + +H IA G HS++ CL N +Y +G
Sbjct: 1166 NDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIM----CLDNGDIYSWG 1221
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
+ +GQLG I P+ L I+ IS + A+S +Y WG+G +
Sbjct: 1222 ANSKGQLG--HGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMC 1279
Query: 267 --SDVNCPQSLPSSLSF------SQAALGWNHVLVLTG------DGEVLMLGGSHHGMLS 312
+ N + P + F + G H +T G V + GG HG L
Sbjct: 1280 LGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339
Query: 313 ---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
D + +P + +L+ + ++ ++G+E SA++T N A+ TWG+G GQ+G
Sbjct: 1340 TGGDLKTPFFDKPHPAV---IPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNFGQIG 1396
Query: 370 LGNTCDQIHPKVVNLGDE 387
G T D P ++L D+
Sbjct: 1397 NGKTEDMWLPTKISLNDQ 1414
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K +ACG H V+ D +++ +G+ +GQLG + + S P+ I
Sbjct: 1032 KKAVSVACGWEHIAVISSD---GELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPI 1088
Query: 238 VGISANGDRSAALSAEGHLYTWG--RGFNSTSDVNCPQSLPSSLS-FS------QAALGW 288
+ IS G+ S A+ +Y+WG R V PQ+LP + F+ A G+
Sbjct: 1089 IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGY 1148
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H +VL G++ G + G L + P+ + ++ + G ++ IAAG HS
Sbjct: 1149 AHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHS 1208
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ +N I +WG GQLG GN + PK + DE + + +++ CG T AIS
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQI---DELKGKPI-IKISCGHFHTVAIS 1264
Query: 409 R 409
Sbjct: 1265 E 1265
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 158/337 (46%), Gaps = 40/337 (11%)
Query: 35 KVWSWGAGTDGQLGTG-------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
KV++ G T G+LG G RL L PQ + ++ S GG H +ALT
Sbjct: 483 KVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHS------GGRHAMALT---- 532
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V+SWG G G+LGHG DAL P+ + F I IS G +HS + SG L
Sbjct: 533 -YDGHVYSWGDGEEGKLGHGSRADALTPRKIETFP--EKCIRDISCGSSHSAAIGSSGTL 589
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGF 205
+T G G +G+LGHG+ + P V + + V Q+ACG R +L L +D L VY +
Sbjct: 590 YTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL---VYSW 646
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G G G+LG + +P+ L ++V I S ALS G ++TWG+
Sbjct: 647 GDGDFGKLG--RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYF 704
Query: 262 --GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G S V PQ + A+G H L +T G+V G + HG +
Sbjct: 705 RLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTT 764
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ +P+ KV L+GVK+ ++A G+ HS +
Sbjct: 765 VNRKPM-----KVQGLEGVKITKLACGSSHSIAFADT 796
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 31/330 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
KV++ G G G+LG G P L+ ++ VS+ A GG H+LAL++ G
Sbjct: 1460 KVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNA-GGKHILALSNE-----G 1513
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWG G G+LGHG +P+ + G I ++ G +HS ++ +G L+T G
Sbjct: 1514 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGD--LIVKVATGGSHSAAINATGGLYTWG 1571
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQ-VYGFGSG 208
G +G+LGH D P V++ + V +ACG +L + + G+ V+ +G G
Sbjct: 1572 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1631
Query: 209 KRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG D + ++ +G H I ++ S ALS G +YTWG+
Sbjct: 1632 DYGKLGRGGSDGCKVPAIIDTLMGKH---ITHVACGSQFSLALSKAGGVYTWGKGDYYRL 1688
Query: 262 GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G S V P+ + S + + ++G H + +G+V G + G + D ++
Sbjct: 1689 GHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQAT 1748
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
P VA L G + ++ G+ H+
Sbjct: 1749 QIPRLVAA-----LQGHHISHVSCGSAHTV 1773
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 175/399 (43%), Gaps = 44/399 (11%)
Query: 36 VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG-GKV 93
++ WG GQLG ++ +L++L + ++ GG L +V G GKV
Sbjct: 1409 IFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLV--GGEQTLF-----TVTGEGKV 1461
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+ G G+ G+LG G P + T ++AG H +S+ G +++ G+G
Sbjct: 1462 FATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEG 1521
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ S P + S + ++A G HS + + G +Y +G G+ G+L
Sbjct: 1522 VDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAI--NATGG-LYTWGKGRYGRL 1578
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGDRSAALSAEGH-----LYTWGR---- 261
G S+D+++ P++ L D +V ++ NGD EG +++WG
Sbjct: 1579 GHEDSEDQLK----PKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYG 1634
Query: 262 --GFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + P + + + + A G L L+ G V G + L
Sbjct: 1635 KLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDE 1694
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
RP + + +L G+KV++++ G+ H +N + TWG + GQ+G G T
Sbjct: 1695 HVRRP-----KLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQ 1749
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
P++V Q V CGS T A S LPS++
Sbjct: 1750 IPRLVA---ALQGHHIS-HVSCGSAHTVAWS---LPSES 1781
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 27/307 (8%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
KVF WG QLG + + + PV D R +T + G V+ G ++
Sbjct: 429 AAKVFVWGLNDKDQLGG--LKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYA 486
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGS 207
CG+ T G+LG G S + F + + ++A G RH++ L D VY +G
Sbjct: 487 CGESTSGRLGLGPVTGSVSRLTQVLF-PQPIKKLAVHSGGRHAMALTYD---GHVYSWGD 542
Query: 208 GKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
G+ G+LG R+ +L P+ + I IS SAA+ + G LYTWG G
Sbjct: 543 GEEGKLGHGS---RADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 599
Query: 264 -----NSTSDVNCPQSLPSSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPER 316
N T P S Q A G L LT DG V G G L
Sbjct: 600 LGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 659
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
P + V L G V++I GA+ S ++ + TWG G++ +LG G+
Sbjct: 660 DGCCVP-----KPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHV 714
Query: 377 IHPKVVN 383
P+VV
Sbjct: 715 RRPQVVE 721
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 133/327 (40%), Gaps = 64/327 (19%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRYTITHISAGWNHSGFV 141
G +F WG GQLG E P KP+ G + T V
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT-----------V 1455
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLG 199
+ G +F G G G+LG G S + P + S + ++ Q++ G +H L L +
Sbjct: 1456 TGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE--- 1512
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+VY +G G G+LG S+ P++ L IV ++ G SAA++A G LYTW
Sbjct: 1513 GEVYSWGEGVDGKLGHGNR--SSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTW 1570
Query: 260 GRGF-----------------------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
G+G N DV C +L ++ G + V+ G
Sbjct: 1571 GKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGT-GGSSVVWSWG 1629
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG+ LG SD +V + + L G + +A G++ S +++
Sbjct: 1630 DGDYGKLGRGG----SDGCKVPAI---------IDTLMGKHITHVACGSQFSLALSKAGG 1676
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ TWG G++ +LG G+ PK++
Sbjct: 1677 VYTWGKGDYYRLGHGSDEHVRRPKLIE 1703
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + LT DG V G G L R + P K+ + I+ G+
Sbjct: 524 GGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTP-----RKIETFPEKCIRDISCGSS 578
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ-------NRDTQLEVFC 399
HSA + + + TWG G +G+LG GN + PK V Q +RD Q
Sbjct: 579 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLT 638
Query: 400 GSGFTYA 406
G Y+
Sbjct: 639 QDGLVYS 645
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 158/337 (46%), Gaps = 40/337 (11%)
Query: 35 KVWSWGAGTDGQLGTG-------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
KV++ G T G+LG G RL L PQ + ++ S GG H +ALT
Sbjct: 482 KVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHS------GGRHAMALT---- 531
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V+SWG G G+LGHG DAL P+ + F I IS G +HS + SG L
Sbjct: 532 -YDGHVYSWGDGEEGKLGHGSRADALTPRKIETFP--EKCIRDISCGSSHSAAIGSSGTL 588
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGF 205
+T G G +G+LGHG+ + P V + + V Q+ACG R +L L +D L VY +
Sbjct: 589 YTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL---VYSW 645
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G G G+LG + +P+ L ++V I S ALS G ++TWG+
Sbjct: 646 GDGDFGKLG--RGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYF 703
Query: 262 --GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G S V PQ + A+G H L +T G+V G + HG +
Sbjct: 704 RLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTT 763
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ +P+ KV L+GVK+ ++A G+ HS +
Sbjct: 764 VNRKPM-----KVQGLEGVKITKLACGSSHSIAFADT 795
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 31/330 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
KV++ G G G+LG G P L+ ++ VS+ A GG H+LAL++ G
Sbjct: 1459 KVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNA-GGKHILALSNE-----G 1512
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWG G G+LGHG +P+ + G I ++ G +HS ++ +G L+T G
Sbjct: 1513 EVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGD--LIVKVATGGSHSAAINATGGLYTWG 1570
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQ-VYGFGSG 208
G +G+LGH D P V++ + V +ACG +L + + G+ V+ +G G
Sbjct: 1571 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDG 1630
Query: 209 KRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG D + ++ +G H I ++ S ALS G +YTWG+
Sbjct: 1631 DYGKLGRGGSDGCKVPAIIDTLMGKH---ITHVACGSQFSLALSKAGGVYTWGKGDYYRL 1687
Query: 262 GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G S V P+ + S + + ++G H + +G+V G + G + D ++
Sbjct: 1688 GHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQAT 1747
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
P VA L G + ++ G+ H+
Sbjct: 1748 QIPRLVAA-----LQGHHISHVSCGSAHTV 1772
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 175/399 (43%), Gaps = 44/399 (11%)
Query: 36 VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG-GKV 93
++ WG GQLG ++ +L++L + ++ GG L +V G GKV
Sbjct: 1408 IFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLV--GGEQTLF-----TVTGEGKV 1460
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+ G G+ G+LG G P + T ++AG H +S+ G +++ G+G
Sbjct: 1461 FATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEG 1520
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ S P + S + ++A G HS + + G +Y +G G+ G+L
Sbjct: 1521 VDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAI--NATGG-LYTWGKGRYGRL 1577
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGDRSAALSAEGH-----LYTWGR---- 261
G S+D+++ P++ L D +V ++ NGD EG +++WG
Sbjct: 1578 GHEDSEDQLK----PKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYG 1633
Query: 262 --GFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + P + + + + A G L L+ G V G + L
Sbjct: 1634 KLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDE 1693
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
RP + + +L G+KV++++ G+ H +N + TWG + GQ+G G T
Sbjct: 1694 HVRRP-----KLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQ 1748
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
P++V Q V CGS T A S LPS++
Sbjct: 1749 IPRLVA---ALQGHHIS-HVSCGSAHTVAWS---LPSES 1780
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 27/307 (8%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
KVF WG QLG + + + PV D R +T + G V+ G ++
Sbjct: 428 AAKVFVWGLNDKDQLGG--LKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYA 485
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGS 207
CG+ T G+LG G S + F + + ++A G RH++ L D VY +G
Sbjct: 486 CGESTSGRLGLGPVTGSVSRLTQVLF-PQPIKKLAVHSGGRHAMALTYD---GHVYSWGD 541
Query: 208 GKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
G+ G+LG R+ +L P+ + I IS SAA+ + G LYTWG G
Sbjct: 542 GEEGKLGHGS---RADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 598
Query: 264 -----NSTSDVNCPQSLPSSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPER 316
N T P S Q A G L LT DG V G G L
Sbjct: 599 LGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 658
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
P + V L G V++I GA+ S ++ + TWG G++ +LG G+
Sbjct: 659 DGCCVP-----KPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHV 713
Query: 377 IHPKVVN 383
P+VV
Sbjct: 714 RRPQVVE 720
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 133/327 (40%), Gaps = 64/327 (19%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRYTITHISAGWNHSGFV 141
G +F WG GQLG E P KP+ G + T V
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT-----------V 1454
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLG 199
+ G +F G G G+LG G S + P + S + ++ Q++ G +H L L +
Sbjct: 1455 TGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNE--- 1511
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+VY +G G G+LG S+ P++ L IV ++ G SAA++A G LYTW
Sbjct: 1512 GEVYSWGEGVDGKLGHGNR--SSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTW 1569
Query: 260 GRGF-----------------------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
G+G N DV C +L ++ G + V+ G
Sbjct: 1570 GKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGT-GGSSVVWSWG 1628
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG+ LG SD +V + + L G + +A G++ S +++
Sbjct: 1629 DGDYGKLGRGG----SDGCKVPAI---------IDTLMGKHITHVACGSQFSLALSKAGG 1675
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ TWG G++ +LG G+ PK++
Sbjct: 1676 VYTWGKGDYYRLGHGSDEHVRRPKLIE 1702
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + LT DG V G G L R + P K+ + I+ G+
Sbjct: 523 GGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTP-----RKIETFPEKCIRDISCGSS 577
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ-------NRDTQLEVFC 399
HSA + + + TWG G +G+LG GN + PK V Q +RD Q
Sbjct: 578 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLT 637
Query: 400 GSGFTYA 406
G Y+
Sbjct: 638 QDGLVYS 644
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 134 bits (336), Expect = 1e-28, Method: Composition-based stats.
Identities = 126/451 (27%), Positives = 188/451 (41%), Gaps = 100/451 (22%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV 69
+K + L+ K KI + + Q KV+ WG+G DG+ G G+ E P N S +
Sbjct: 911 KKEQMQLLPRIKLKIFGQVNKNQSYKVFVWGSGKDGRCGNGKESSEKLPNQANTS--HNF 968
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
+ L+CG H A+TS G + SWGRG GQLGHG+ + P P+ + I
Sbjct: 969 TQLSCGYHHSAAVTS-----DGMILSWGRGIFGQLGHGDTENYSLPTPIEAL--VKIQII 1021
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGM 187
+S GW HS +S G +F+ G G GQLGHGD + P ++ F NV IACG
Sbjct: 1022 QVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGH 1081
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI---------------GL 232
HS + D +Q+Y +G +L + ++ + LP +TI L
Sbjct: 1082 SHS-GCITDGQSSQLYLWGCNPDCRLMIEEN--ENQLLPTLTILEQAKMKNYERGDQLKL 1138
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-----QSLPSSLS------- 280
+E +S +A ++ G LYT G + VN QS PSSLS
Sbjct: 1139 EGLEPCYLSLGVTHTAIVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLIN 1198
Query: 281 ----------------------------FS------QAALGWNHVLVLTGDGEVLMLGGS 306
FS Q + G +VL EV G
Sbjct: 1199 ESNSSFINQFKDQKELKSQSLPIYRVDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKL 1258
Query: 307 HHGMLS-------DPERVSSTRPLSVALEKVSNLDGV-----------------KVIQIA 342
HG L + ++ + + S+ + + +G KV+QI+
Sbjct: 1259 SHGRLGVGNGQNLNQQKTNQLKQ-SIQNQTYQSTEGSNDCIAEPQLLQSLSQSEKVVQIS 1317
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
AG H+A VT++ + WG+ + QLGLG++
Sbjct: 1318 AGCRHAACVTDSGKLYAWGFNFYEQLGLGDS 1348
Score = 74.3 bits (181), Expect = 1e-10, Method: Composition-based stats.
Identities = 85/335 (25%), Positives = 134/335 (40%), Gaps = 92/335 (27%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+++SWG G DGQLG G +D L P+ ++ +S V M+ACG +H +T S +
Sbjct: 1038 RIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQS---SQ 1094
Query: 93 VFSWGRGSSGQLGHGEMVDALYP--------KPVTFFDGHRYTIT-----HISAGWNHSG 139
++ WG +L E + L P K + G + + ++S G H+
Sbjct: 1095 LYLWGCNPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTA 1154
Query: 140 FVSDSGCLFTCGDGTFGQLG------------------------------------HGDY 163
V+ SG L+T G GQLG +
Sbjct: 1155 IVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKEL 1214
Query: 164 RSHSSPV-KVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS----- 216
+S S P+ +V F +N Q++CG ++VL + N+VY FG G+LGV
Sbjct: 1215 KSQSLPIYRVDFFSAQNKATQVSCGDAFTIVLNER---NEVYAFGKLSHGRLGVGNGQNL 1271
Query: 217 --------KDRIRS------------VSLPQVTIGLHDIE-IVGISANGDRSAALSAEGH 255
K I++ ++ PQ+ L E +V ISA +A ++ G
Sbjct: 1272 NQQKTNQLKQSIQNQTYQSTEGSNDCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGK 1331
Query: 256 LYTWGRGF-------NSTSDVNCPQSLPSSLSFSQ 283
LY WG F +S D + P + L S+
Sbjct: 1332 LYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSK 1366
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 256 LYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
++ WG G + S P +S +F+Q + G++H +T DG +L G G
Sbjct: 937 VFVWGSGKDGRCGNGKESSEKLPNQANTSHNFTQLSCGYHHSAAVTSDGMILSWGRGIFG 996
Query: 310 MLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
L D E S P+ ++ +++IQ++ G +HS ++ I +WG+GE GQ
Sbjct: 997 QLGHGDTENYSLPTPIEALVK-------IQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQ 1049
Query: 368 LGLGNTCDQIHPKVVNL 384
LG G+T D + PK ++
Sbjct: 1050 LGHGDTNDYLLPKEIDF 1066
Score = 40.8 bits (94), Expect = 1.3, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-RSHSSPVKVSS-FVNKNVHQIAC 185
+ ISAG H+ V+DSG L+ G + QLG GD + P KVS + V ++C
Sbjct: 1313 VVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSC 1372
Query: 186 GMRHSLVLLK 195
G H+ L++
Sbjct: 1373 GYFHTGALVQ 1382
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 191/413 (46%), Gaps = 53/413 (12%)
Query: 27 EEEEQQVVKVWSWGAGTDGQLGTGRLH-----DELSPQLLNLSSLSSVSMLACGGAHVLA 81
+EE ++W WG G GT +L D P+ + + V +ACG H
Sbjct: 78 QEEGDVFGELWMWGEGIGDGGGTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHAAL 137
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
+T G+VFSWG S G+LGHG D +P+ + T+ +++ G HS V
Sbjct: 138 VTR-----QGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASS--TVQYVACGEYHSCAV 190
Query: 142 SDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCL 198
+ SG L+T GDGT FG LGHG+ SH +P +V V +ACG H++++
Sbjct: 191 TQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTST-- 248
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-------- 250
Q++ FG G G LG DR +S S+P+ L ++ + + +AA+
Sbjct: 249 -GQLFSFGDGTFGVLG-HGDR-KSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYS 305
Query: 251 ----SAEGHLYTWGRG-FNSTSDVNCPQSL-PSSLS------FSQAALGWNHVLVLTGDG 298
S G L+TWG G N + Q L P+ ++ F Q A G + + LT G
Sbjct: 306 NAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTG 365
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ +G +G L DP+ L V L + +++ GA H A +T +
Sbjct: 366 HLYTMGSVSYGQLGDPQATGR-------LPGVLRLGRTLIEEVSCGAYHVAALTSKGDVC 418
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFTYAISRH 410
TWG G +G+LG G+ D+ P +V RD Q+ +V CGS FT AI H
Sbjct: 419 TWGKGANGRLGHGDAEDRDVPSLVE-----ALRDKQVKKVSCGSSFTSAICLH 466
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G +L P + + +ACG + +ALT+ G ++
Sbjct: 314 KLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTT-----TGHLY 368
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G S GQLG + L P G R I +S G H ++ G + T G G
Sbjct: 369 TMGSVSYGQLGDPQATGRL---PGVLRLG-RTLIEEVSCGAYHVAALTSKGDVCTWGKGA 424
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+LGHGD P V + +K V +++CG + + CL G G+G
Sbjct: 425 NGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAI---CLHKSGPGVGTG 475
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ + ++ +ACG H A+T+ G+++
Sbjct: 97 EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ ++ +G + ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGALEG--LQVAYVSCGTWHTALITSMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FG LGHG+ +S S P +V S +ACG+ H+ +
Sbjct: 210 DGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
+E++ +S+A + G L+TWG G
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + C SL F + A G + + LT G+V +G S +G L +P S RP
Sbjct: 284 KEARLNPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPN--SDGRP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V +K++N V+Q+A G+ H +V+T + TWG G +G+LG G+ DQ KV
Sbjct: 341 CLVG-DKITN---EHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQ---KVP 393
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + + CG+ FT AI H
Sbjct: 394 TLVEALKDRSVR-HIACGANFTAAICLH 420
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 178/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 330 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 384
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+S G LGHG V PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 385 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 442
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 443 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 502
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ L
Sbjct: 503 FTWGDGDKGRLG----------------------------HGDKDTRLVP---------- 524
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + LT G V +G +G L +P+ P
Sbjct: 525 -------TCVAALVEP-NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ-ADGMLP 575
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 576 VRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLV 631
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 632 EALKDKQVR----TVVCGINFTAAICIH 655
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 185/379 (48%), Gaps = 43/379 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H +T G+VFSWG S G+LGHG D L
Sbjct: 296 DSLFPKALESAVVLDVQNIACGGRHAALVTKQ-----GEVFSWGEESGGRLGHGVDSDVL 350
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
+PK + I ++ G HS V+ SG L+T G+GT+ G LGHG+ SH P +
Sbjct: 351 HPKLIEALSN--TNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKR 408
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
V+ + +V I+CG H+ V+ Q++ FG G G LG DR +SVSLP+
Sbjct: 409 VNGPLEGIHVSYISCGPWHTAVVTS---AGQLFTFGDGTFGALG-HGDR-KSVSLPREVE 463
Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFN-STSDVNCPQSL-P 276
L + V + +AA+ + L+TWG G V+ L P
Sbjct: 464 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVP 523
Query: 277 SSLSFS-----QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
+ ++ + Q A G + + LT G V +G +G L +P+ + L + +E
Sbjct: 524 TCVALAEHNVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQ---ADGKLPILVE--G 578
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V + +++
Sbjct: 579 KLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLV---EALKDK 635
Query: 392 DTQLEVFCGSGFTYAISRH 410
D + + CG+ FT AI H
Sbjct: 636 DVK-SIACGTTFTAAICLH 653
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 165/338 (48%), Gaps = 37/338 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G+LG G D L P+L+ S +++ ++ACG H A+T + G ++
Sbjct: 329 EVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVT-----LSGDLY 383
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G +++IS G H+ V+ +G LFT G
Sbjct: 384 TWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFG 441
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S + ACG+ H+ +++ +GN +
Sbjct: 442 DGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDL 501
Query: 203 YGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
+ +G G +G+LG V K+ L + L + + ++ + AL+ G +YT
Sbjct: 502 FTWGDGDKGRLGHVDKE----AKLVPTCVALAEHNVCQVACGHSLTVALTTSGRVYTMGS 557
Query: 259 --WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
+G+ N +D P + LS S + A G HV VLT EV G +G L
Sbjct: 558 PVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGH 617
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ + R +E + + D V IA G +A +
Sbjct: 618 GD--TDDRNTPTLVEALKDKD---VKSIACGTTFTAAI 650
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V +++WG G G+LG +L P + L+ +V +ACG + +ALT+ G+V
Sbjct: 499 VDLFTWGDGDKGRLGHVDKEAKLVPTCVALAE-HNVCQVACGHSLTVALTT-----SGRV 552
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G GQLG+ + D P V + + I+ G H ++ ++T G G
Sbjct: 553 YTMGSPVYGQLGNPQ-ADGKLPILVEGKLSESF-VEEIACGAYHVAVLTSRTEVYTWGKG 610
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G+LGHGD ++P V + +K+V IACG + + CL V G
Sbjct: 611 ANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAI---CLHKWVSG 658
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +D+L+PK + + +I+ G H+ V+ G +F+ G+ + G+LGHG
Sbjct: 292 GAKMDSLFPKALE--SAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV 349
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
P + + N N+ +ACG HS + L +Y +G+G G LG +++
Sbjct: 350 LHPKLIEALSNTNIELVACGEYHSCAVT---LSGDLYTWGNGTYNYGLLG-HGNQVSHWV 405
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
+V L I + IS +A +++ G L+T+
Sbjct: 406 PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTF------------------------- 440
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
GDG LG HG +R S + P +V +L G++ ++ A G
Sbjct: 441 -----------GDGTFGALG---HG-----DRKSVSLP-----REVESLKGLRTVRAACG 476
Query: 345 AEHSAVVTENRA------------IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
H+A V E + TWG G+ G+LG + ++ P V L +
Sbjct: 477 VWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEH----- 531
Query: 393 TQLEVFCGSGFTYAIS 408
+V CG T A++
Sbjct: 532 NVCQVACGHSLTVALT 547
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 174/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ ++S+V +ACG H A+T+ G ++
Sbjct: 274 EVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTA-----SGDLY 328
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG GS +G LGHG PK V+ +G + ++ G HS SG +FT G
Sbjct: 329 NWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG--LQVLSVACGSWHSALAMSSGKVFTFG 386
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHG+ + + P +V S ++ACG+ HS +++ + + +++
Sbjct: 387 DGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFT 446
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG R V P V L D
Sbjct: 447 WGDGDKNRLGHGDKEARLV--PTVVQALVDN----------------------------- 475
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+F Q A G++ + L G V +G S++G L +P + +P
Sbjct: 476 ---------------NFHQVACGYSMTIALATSGHVFTMGSSNYGQLGNP-KADGKQPCQ 519
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V + S L V +I+ G+ H AV+T + TWG G +G+LG G D+ P +V
Sbjct: 520 VQDKLSSEL----VEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIV-- 573
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
D ++R + + CGS FT I H
Sbjct: 574 -DALKDRHVK-SIACGSNFTTCICIH 597
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 128/348 (36%), Gaps = 100/348 (28%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
G V+ WG GSS + D L PKP+ D + IS G H
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVC--SKTDVLIPKPLESDVVLD-----VQQISCGSRHI 266
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ G +FT G+ G+LGHG S P V S NV IACG H+ +
Sbjct: 267 ALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVT---A 323
Query: 199 GNQVYGFGSGKRGQ------LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+Y +G G +G S + VS P L ++++ ++ SA +
Sbjct: 324 SGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGP-----LEGLQVLSVACGSWHSALAMS 378
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G ++T+ GDG LG + ++
Sbjct: 379 SGKVFTF------------------------------------GDGTFGALGHGNRENVA 402
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGW 362
P+ V S L G + +++A G HSA + E +R + TWG
Sbjct: 403 YPKEVES-------------LSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGD 449
Query: 363 GEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYAIS 408
G+ +LG G+ ++ P VV + + F +V CG T A++
Sbjct: 450 GDKNRLGHGDKEARLVPTVVQALVDNNFH------QVACGYSMTIALA 491
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 178/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 375 EIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVT-----LSGDLY 429
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+S G LGHG V PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 430 TWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG--IHVSAISCGPWHTAIVTSAGQLFTFG 487
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 488 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 547
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ L
Sbjct: 548 FTWGDGDKGRLG----------------------------HGDKDTRLVP---------- 569
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + LT G V +G +G L +P+ P
Sbjct: 570 -------TCVAAL-VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ-ADGMLP 620
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 621 VRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLV 676
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 677 ESLKDKQVR----TVVCGINFTAAICIH 700
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 124/316 (39%), Gaps = 73/316 (23%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +D L PKP+ F + + +IS G H+ V+ G +++ G+ + G+LGHG
Sbjct: 338 GVKMDCLIPKPLEF--AVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 395
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
P + + N N+ +ACG H+ + L +Y +G+G G LG + V
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAVT---LSGDLYTWGNGTSNSGLLGHGNEVSHWVP 452
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
+V L I + IS +A +++ G L+T+
Sbjct: 453 K-RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTF------------------------- 486
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
GDG +LG LS P V S L G++ ++ A G
Sbjct: 487 -----------GDGSFGVLGHGDRQSLSVPREVES-------------LKGLRTVRAACG 522
Query: 345 AEHSAVVTE------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
H+A V E + I TWG G+ G+LG G+ ++ P V E
Sbjct: 523 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE----P 578
Query: 393 TQLEVFCGSGFTYAIS 408
++ CG T A++
Sbjct: 579 NFCQIACGHCMTVALT 594
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 171/388 (44%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG G G+LG D SP++++ + V +ACG H ALT G+V+
Sbjct: 324 EVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTD-----SGEVY 378
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG + L G P+ + DG +I+ ++ G H+ VS G LFT G
Sbjct: 379 TWGNDVCCADLLIEGRTRSQWIPQKLGGSLDG--ISISSVACGEWHTAIVSSCGRLFTYG 436
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD RS+SSP +V S V ACG H+ +++
Sbjct: 437 DGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVE---------------- 480
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------- 263
V DR R S A G L+TWG G
Sbjct: 481 ---VMFDRFRYNS---------------------------ASGKLFTWGDGDEGRLGHVD 510
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
N + V + F Q + G + LT G+V +G + +G L +P R
Sbjct: 511 NGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPH----ARDK 566
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V +E + VKVI + G+ H AV+T ++ TWG GE+GQLGLG+T D+ P V
Sbjct: 567 AVMVEGQLKQEFVKVI--STGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVE 624
Query: 384 LGDEFQNRDTQLE-VFCGSGFTYAISRH 410
RD Q+ + CG FT AIS H
Sbjct: 625 AL-----RDRQVNTITCGPSFTAAISLH 647
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 186/385 (48%), Gaps = 43/385 (11%)
Query: 48 GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
G G D L P+ L + + V +ACGG H +T G++FSWG S G+LGHG
Sbjct: 313 GLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQ-----GEIFSWGEESGGRLGHG 367
Query: 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRS 165
D L+PK + I ++ G H+ V+ SG L+T G+G +G LGHG+ S
Sbjct: 368 VDSDVLHPKLIDALSN--TNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVS 425
Query: 166 HSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
H P +V+ + +V I+CG H+ V+ Q++ FG G G LG DR +SVS
Sbjct: 426 HWVPKRVNGPLEGIHVSYISCGPWHTAVVTS---AGQLFTFGDGTFGALG-HGDR-KSVS 480
Query: 225 LPQVTIGLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNSTSDVNCP 272
LP+ L + + S +AA+ + G L+TWG G
Sbjct: 481 LPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 540
Query: 273 QS--LPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
++ +P+ ++ F Q A G + + LT G V +G +G L +P+ P V
Sbjct: 541 EAKLVPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQ-ADGKLPTRV 599
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+ + + V +IA GA H AV+T + TWG G +G+LG G+T D+ +P +V
Sbjct: 600 EGKLLKSF----VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLV--- 652
Query: 386 DEFQNRDTQLEVFCGSGFTYAISRH 410
D +++ + + CG+ FT AI H
Sbjct: 653 DALKDKHVK-SIACGTNFTAAICLH 676
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 35/337 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D L P+L++ S +++ ++ACG H A+T + G ++
Sbjct: 352 EIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVT-----LSGDLY 406
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G +++IS G H+ V+ +G LFT G
Sbjct: 407 TWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFG 464
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P +V S + +CG+ H+ +++ +GN ++
Sbjct: 465 DGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKL 524
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G +G+LG + L + L + ++ + AL+ GH+Y
Sbjct: 525 FTWGDGDKGRLGHGD---KEAKLVPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSP 581
Query: 259 -WGRGFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ N +D P + L SF + A G HV VLT EV G +G L
Sbjct: 582 VYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHG 641
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L V IA G +A +
Sbjct: 642 DTDDRNNPT-----LVDALKDKHVKSIACGTNFTAAI 673
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 159/377 (42%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3036 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3090
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3091 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3148
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V + + V Q+ACG R +L L +D V+ +G G
Sbjct: 3149 GEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3205
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I +V I S AL+ G ++TWG+G
Sbjct: 3206 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG-------- 3255
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H P +
Sbjct: 3256 --------------------------DYYRLGHGGDQHVRKPQP---------------I 3274
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3275 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3334
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3335 NR-----VACGSSHSIA 3346
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+T+ G V
Sbjct: 4152 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4206
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4207 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4266
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4267 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4323
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4324 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4367
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 4140 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4192
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + +V + S AL+
Sbjct: 4253 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4307
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4308 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4367
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4368 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4413
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G D +LG G H P + V + CG ++ A+T GG + +W
Sbjct: 635 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLTW 689
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G +F GDG +G
Sbjct: 690 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 749
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G+ P+ V S V ++ G + SL L + Q+Y +G +
Sbjct: 750 KLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSLALSSE---GQLYSWGKATCLGHQLV 804
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ + ALS+ G ++ WGR N + + CP S+
Sbjct: 805 ERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASVS 861
Query: 277 S 277
S
Sbjct: 862 S 862
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 162/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4047 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4101
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4102 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4161
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 4162 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4218
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4219 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4276
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4277 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4333
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 4334 --KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 4389
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4390 -ALQGKHI-VKVTCGSAHTLALS 4410
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + S +G +Y
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 3040
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 3101 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3155
Query: 370 LGNTCDQIHPKVV 382
G+ Q+ PK+V
Sbjct: 3156 HGDNVTQLKPKLV 3168
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 104/286 (36%), Gaps = 70/286 (24%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R+ I ++ +S G L+T + + P+ + ++ IA
Sbjct: 568 RFQIKQVACCETQMLILSQEGKLYTWRLA----------KPEAEPLPMEEVAHEVFISIA 617
Query: 185 --CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
C RH L + + + Y +G+G+ +LG R+V P L + +
Sbjct: 618 GHCEGRHFLAIDSN---HNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVYC 672
Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
SAA++ G+L TWGRG + A LG
Sbjct: 673 GCSYSAAITCGGNLLTWGRG-------------------TYARLG--------------- 698
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
HG D S L VAL +D + + +G HS +T + WG
Sbjct: 699 -----HGNSDD----RSLPTLVVALSDHMVVD----VALGSGDAHSLALTSEGLVFAWGD 745
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G++G+LG GN + P +V Q VF GS F+ A+S
Sbjct: 746 GDYGKLGNGNCNGSLQPILVESLPRVQR------VFAGSQFSLALS 785
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + L P L+ SL V + G LAL+S G+++S
Sbjct: 740 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRVFAGSQFSLALSS-----EGQLYS 792
Query: 96 WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + LGH + ++ P+ V+ R I ++ H +S SG +F G
Sbjct: 793 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGWG 848
Query: 152 DGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLV 192
Q+ S +P+ V S IAC SLV
Sbjct: 849 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV 891
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 162/357 (45%), Gaps = 36/357 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D LSP L+ V + CG H A + + +V+S
Sbjct: 37 VCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFT----QVYS 92
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG D P+P+ G R I I+ G +H V+ G + + G
Sbjct: 93 WG------------CDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQN 138
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F +V +A G H+ + +D ++YG+G G+ G LG+
Sbjct: 139 GQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED---GELYGWGWGRYGNLGL 195
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R V P+ + +++V ++ + ++S+ G LYT+G G D
Sbjct: 196 GDRNDRLV--PEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDH 253
Query: 270 NCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + S+ + GW H + LT DG++ G + G + + V P+ V
Sbjct: 254 LTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKF 313
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
KV+ I+ G H+ VTE + + +WG G +GQLG G + D+ PK++ +
Sbjct: 314 PHEQ-----KVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEV 365
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 131/247 (53%), Gaps = 18/247 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + SV M+A G H A+T G+++
Sbjct: 129 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED-----GELY 183
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ V+ +G + + ++ GW H+ VS SG L+T G
Sbjct: 184 GWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK--MVKVACGWRHTISVSSSGGLYTYGWSK 241
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H +P K+ + + +I+ G RH++ L D ++YG+G K GQ+G
Sbjct: 242 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSD---GKLYGWGWNKFGQVG 298
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V D + S QV H+ ++V IS + A++ ++++WGRG N + D
Sbjct: 299 VG-DNVDHCSPVQVKF-PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESID 356
Query: 269 VNCPQSL 275
N P+ +
Sbjct: 357 RNIPKMI 363
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 29/257 (11%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
ISAG +HS + + + G G GQLGHGD SP +S+ V + CG H+
Sbjct: 21 ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ QVY +G + PQ LH + I I+ A+
Sbjct: 81 TAYSESF--TQVYSWGC--------------DLFTPQPIKALHGLRIKQIACGDSHCLAV 124
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
+ +G + +WGR G +T D PQ + + +S A G H +T DGE+
Sbjct: 125 TMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYG 184
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G +G L +R P EKVS ++GVK++++A G H+ V+ + + T+GW
Sbjct: 185 WGWGRYGNLGLGDRNDRLVP-----EKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGW 239
Query: 363 GEHGQLGLGNTCDQIHP 379
++GQLG G+ D + P
Sbjct: 240 SKYGQLGHGDFEDHLTP 256
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 27/236 (11%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDI 235
+ V I+ G HS+ LL GN V +G G+ GQLG ++DR+ P L
Sbjct: 16 RRVLLISAGASHSVALLX---GNVVCSWGRGEDGQLGHGDAEDRLS----PTYLSALDGH 68
Query: 236 EIVGISANGDRSAALSAE-GHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
E+V ++ D + A S +Y+WG D+ PQ + + L Q A G +H L
Sbjct: 69 EVVSVTCGADHTTAYSESFTQVYSWG------CDLFTPQPIKALHGLRIKQIACGDSHCL 122
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+T DGEV G + +G L T S+ +K+ GV V +AAGAEH+A VT
Sbjct: 123 AVTMDGEVQSWGRNQNGQLG-----LGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVT 177
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
E+ + WGWG +G LGLG+ D++ P+ V+ + + ++V CG T ++S
Sbjct: 178 EDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK----MVKVACGWRHTISVS 229
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 175/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ SL+ V +++CG H A+T+ G +F
Sbjct: 276 EVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTT-----SGDLF 330
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG GS G LG G V PK V+ +G + ++ G HS + SG L+T G
Sbjct: 331 NWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG--LQVLSVACGSWHSALTTSSGKLYTFG 388
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD + + P +V + ++ACG+ HS +++ + + ++Y
Sbjct: 389 DGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYT 448
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GD+ L +
Sbjct: 449 WGDGDKNRLG----------------------------HGDKEPRLVPK----------- 469
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L +F Q A G N + L G V +G S +G L +P + +P
Sbjct: 470 ------CVQAL-LEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNP-KSDGKQPCL 521
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V S L V +I+ GA H V+T + TWG G +G+LG G+ D+ P +V
Sbjct: 522 VQDRLASEL----VEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLV-- 575
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 576 -EALKDRHVK-SISCGSNFTTCICIH 599
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 164/378 (43%), Gaps = 73/378 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K+++ G GT+G+LG G ++ P+ + S + +A GG H LALT GK
Sbjct: 2642 KLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQ-----DGK 2696
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG + PK + R I I+ G HS ++ +G L+T G
Sbjct: 2697 VFSWGEGEDGKLGHGNCISLDKPKLIEILKSKR--IRDIACGSGHSAAIASNGELYTWGL 2754
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKD-CLGNQVYGFGSGK 209
G +G+LGHGD + + P V + V + V Q+ACG R ++ L D C VY +G G
Sbjct: 2755 GEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGC----VYSWGDGD 2810
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
G+LG + P L+ + ++ + S AL+ G ++TWG+
Sbjct: 2811 FGKLG--RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGK-------- 2860
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
GD L G HH + P V R
Sbjct: 2861 --------------------------GDYFRLGHGNDHH--VRKPTLVEGLR-------- 2884
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEF 388
G K+I +A GA H VT+ + WG +HGQ G G T P +V +L D
Sbjct: 2885 -----GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDAR 2939
Query: 389 QNRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 2940 VNR-----VSCGSSHSIA 2952
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G P+L+ ++ +ACG + AL++ G++++
Sbjct: 168 VYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALSA-----SGELYT 222
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF--VSDSGCLFTCGDG 153
WGRG+ G+LGHG D L P VT GH T+ H++ G S V+ SG +F+ GDG
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGH--TVVHVACGSGDSQTLCVTASGIVFSWGDG 280
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G +L
Sbjct: 281 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAH---GEVYTWGKGDAYRL 337
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + V P+V L D +I +S AL+ + +Y WGR
Sbjct: 338 GHGSE--EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGR 383
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 126/257 (49%), Gaps = 23/257 (8%)
Query: 69 VSMLA--CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHR 125
++M+A G H LALT G V+SWG G G+LGHG+ V PK + + D +
Sbjct: 147 ITMIASHADGKHYLALTQ-----DGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKN- 200
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I I+ G +S +S SG L+T G G +G+LGHG++ +P V++ V +AC
Sbjct: 201 --IVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVAC 258
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G S L G V+ +G G G+LG + P++ L DI +V + G
Sbjct: 259 GSGDSQTLCVTASG-IVFSWGDGDYGKLG--RGGTDGSKTPKIVDKLLDINVVKVFCGGQ 315
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGD 297
SAAL+A G +YTWG+ G S V P+ + S ++G H+L LT D
Sbjct: 316 FSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTED 375
Query: 298 GEVLMLGGSHHGMLSDP 314
V G + +G + DP
Sbjct: 376 QFVYGWGRNDYGQI-DP 391
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 12/216 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G D L+P L+ +V +ACG L +S G VF
Sbjct: 219 ELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTAS---GIVF 275
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWG G G+LG G + PK V D + + G S ++ G ++T G G
Sbjct: 276 SWGDGDYGKLGRGGTDGSKTPKIVDKLLD---INVVKVFCGGQFSAALTAHGEVYTWGKG 332
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+LGHG P + S +K + ++ G H L L +D VYG+G GQ+
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQF---VYGWGRNDYGQI 389
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+ + VS P + L ++G+++ +S A
Sbjct: 390 DPTLGPV--VSEPTLCPTLSSKTVIGLASGPTQSFA 423
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 22/280 (7%)
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
G++ + HG + YP V F T+ A H ++ GC+++ G+G G+L
Sbjct: 122 GNAYNMYHGS--ETQYPLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRL 179
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK- 217
GHGD S+ P + S ++KN+ IACG +S L ++Y +G G G+LG
Sbjct: 180 GHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAAL---SASGELYTWGRGNYGRLGHGNF 236
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
D + + +L T+ H + V + ++ ++A G +++WG G T
Sbjct: 237 DDVLTPTL-VTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT 295
Query: 272 PQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P+ + L + + G LT GEV G D R+ V K
Sbjct: 296 PKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGK------GDAYRLGHGSEEHVRYPK 349
Query: 330 V-SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
V +L K+ ++ G H +TE++ + WG ++GQ+
Sbjct: 350 VIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 32/231 (13%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSGKRGQLG----VSKDRIR 221
P++V F +K + IA +H L L +D C VY +G+G G+LG VS D
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGC----VYSWGNGDGGRLGHGDTVSYDE-- 189
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P++ L D IV I+ SAALSA G LYTWGRG + DV P +
Sbjct: 190 ----PKLIESLLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLV 245
Query: 276 PS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
+ ++ G + L +T G V G +G L S P + V
Sbjct: 246 TTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP-----KIVD 300
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L + V+++ G + SA +T + + TWG G+ +LG G+ +PKV+
Sbjct: 301 KLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVI 351
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H L LT DG V G G L + VS P + + +L ++ IA G+ +S
Sbjct: 157 KHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEP-----KLIESLLDKNIVFIACGSTYS 211
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
A ++ + + TWG G +G+LG GN D + P +V T + V CGSG
Sbjct: 212 AALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTT----LKGHTVVHVACGSG 261
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 169/384 (44%), Gaps = 77/384 (20%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
S +I A +EE Q+ +SWG G G+LG G D +PQ + ++ +A
Sbjct: 79 SVVICGADHTTAYSDEELQL---YSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 135
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H LA+T + G V SWGR +GQLG G D+L P+ + F+G R + I+A
Sbjct: 136 CGDSHCLAVT-----VAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR--VKMIAA 188
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ V++ G L+ G G +G LG GD P KVSS + + +ACG RH++ +
Sbjct: 189 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV 248
Query: 194 LKDCLGNQVYGFGSGKRGQLGVS--KDRI---RSVSLPQVTIGLHD-IEIV-------GI 240
+Y +G K GQLG +D + + +L TI + +E++ G
Sbjct: 249 SSS---GSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGF 305
Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHV-LVLTGDGE 299
G AL+A+G LY WG WN V GD E
Sbjct: 306 RVGGGIQWALAADGKLYGWG---------------------------WNKFGQVGVGDNE 338
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
P+ V KV+Q+A G H+ +TE + + +
Sbjct: 339 ------------------DHCSPVQVNFPNEQ-----KVVQVACGWRHTLALTEAKNVFS 375
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN 383
WG G GQLG G D+ PK+++
Sbjct: 376 WGRGTSGQLGHGEIVDRNIPKMID 399
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 174/381 (45%), Gaps = 47/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
DE P+ + SV +++ G +H +AL S GG V SWGRG GQLGHG+ D
Sbjct: 11 DEAVPE----APERSVVLISAGASHSVALLS-----GGVVCSWGRGEDGQLGHGDAEDRP 61
Query: 114 YPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPV 170
P +T F D + + G +H+ SD L++ G G FG+LGHG+ +P
Sbjct: 62 VPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQ 121
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQV 228
+ + + QIACG H L + + V+ +G + GQLG+ ++D + LPQ
Sbjct: 122 PIQALQGVRITQIACGDSHCLAV---TVAGHVHSWGRNQNGQLGLGNTEDSL----LPQK 174
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLS 280
+ + I+A + +AA++ +G LY WG G D P+ + S
Sbjct: 175 IQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--------PERVSSTRPLSVALEKVSN 332
A GW H + ++ G + G S +G L P ++ + + +++ E+
Sbjct: 235 MVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVE 294
Query: 333 LD----GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
L G + ++ G + + + + + WGW + GQ+G+G+ D P VN F
Sbjct: 295 LIFFFLGDEGFRVGGGIQWA--LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVN----F 348
Query: 389 QNRDTQLEVFCGSGFTYAISR 409
N ++V CG T A++
Sbjct: 349 PNEQKVVQVACGWRHTLALTE 369
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 175/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ SL+ V +++CG H A+T+ G +F
Sbjct: 276 EVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTT-----SGDLF 330
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG GS G LG G V PK V+ +G + ++ G HS + SG L+T G
Sbjct: 331 NWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG--LQVLSVACGSWHSALTTSSGKLYTFG 388
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD + + P +V + ++ACG+ HS +++ + + ++Y
Sbjct: 389 DGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYT 448
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GD+ L +
Sbjct: 449 WGDGDKNRLG----------------------------HGDKEPRLVPK----------- 469
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L +F Q A G N + L G V +G S +G L +P + +P
Sbjct: 470 ------CVQALLE-YNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNP-KSDGKQPCL 521
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V S L V +I+ GA H V+T + TWG G +G+LG G+ D+ P +V
Sbjct: 522 VQDRLASEL----VEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLV-- 575
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 576 -EALKDRHVK-SISCGSNFTTCICIH 599
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 189/399 (47%), Gaps = 45/399 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+ G DG + D L+P+ L + + V + CG HV +T G+V
Sbjct: 218 EVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTR-----QGEV 272
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG G+LGHG VD PK V F I ++ G H+ VS SG LF+ GDG
Sbjct: 273 FTWGEEVGGRLGHGIQVDISRPKLVEFL--ALTNIDFVACGEYHTCVVSTSGDLFSWGDG 330
Query: 154 --TFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LGHG SH P +VS V +ACG HS + + +++ FG G
Sbjct: 331 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 387
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----------GDRSAALSAEGHLYTW 259
G LG SVS P+ L+ ++ V ++ + G + ++S+ L+TW
Sbjct: 388 GVLGHGNRE--SVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSR-KLFTW 444
Query: 260 GRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G G + ++ LP+ +S F + A G + LT G V +GG+ HG L
Sbjct: 445 GDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQL 504
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +S + + ++ L G V +IA GA H AV+T + TWG G +G+LG G
Sbjct: 505 GN--SISDGKLPCLVQDR---LVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHG 559
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T D+ P +V + ++R + + CGS FT +I H
Sbjct: 560 DTEDKRTPTLV---EALRDRHVK-SLSCGSNFTSSICIH 594
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 177/388 (45%), Gaps = 75/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D PQL+ + +S+ +ACG H A+T + G+++
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT-----MTGEIY 346
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK ++ +G I +S G H+ ++ +G LFT G
Sbjct: 347 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG--LQIASVSCGPWHTALITSTGQLFTFG 404
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD + P +V S +ACG+ H+ +++ + + SGK
Sbjct: 405 DGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGK-- 462
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SD 268
L+TWG G S D
Sbjct: 463 --------------------------------------------LFTWGDGDKSRLGHGD 478
Query: 269 VNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P+ P+ +S F + A G + + LT G+V +G + +G L +P ++
Sbjct: 479 KE-PRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNP---NADGK 534
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L +E D V+ +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 535 LPCLVEDKLTKDCVE--EIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLV 592
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
D + R + + CGS FT AI H
Sbjct: 593 ---DALKERHVK-NIACGSNFTAAICLH 616
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 141/346 (40%), Gaps = 92/346 (26%)
Query: 91 GKVFSWGR---------GSSGQLGH-GEMVDALYPKPV---TFFDGHRYTITHISAGWNH 137
G V+ WG G+ +G+ G D L PKP+ D H HI+ G H
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH-----HIACGVKH 283
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
+ VS G +FT G+ + G+LGHG + + P + S ++ +ACG H+ +
Sbjct: 284 AALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT--- 340
Query: 198 LGNQVYGFGSGKR--GQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEG 254
+ ++Y +G G G LG D S +P+ G L ++I +S +A +++ G
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTD--VSHWIPKRISGPLEGLQIASVSCGPWHTALITSTG 398
Query: 255 HLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
L+T+ GDG +LG HG D
Sbjct: 399 QLFTF------------------------------------GDGTFGVLG---HG---DK 416
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE-----------NRAIMTWGWG 363
E V R +V +L G++ I +A G H+A + E + + TWG G
Sbjct: 417 ETVFYPR-------EVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDG 469
Query: 364 EHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAIS 408
+ +LG G+ ++ P V+ L D +R V CG T ++
Sbjct: 470 DKSRLGHGDKEPRLKPTCVSALIDHTFHR-----VACGHSLTVGLT 510
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 165/339 (48%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G + L L D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 4290 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4345 IRQISAGRCHSAAWT 4359
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4283 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 141/307 (45%), Gaps = 34/307 (11%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+V+ WG SS QL G L PK ++F D I AG + +S G + C
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQT-----IEAGQYCTFVISTDGSVRAC 427
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
G G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGD 484
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
G G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 485 GDYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERV 317
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQ 376
+ V L G+ + ++ AG++ S +T + WG G LG G++
Sbjct: 603 YKPK-------VVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATA 653
Query: 377 IHPKVVN 383
+ PK++
Sbjct: 654 LRPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4147
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4148 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4202
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 176/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ ++S+V +ACG H A+T+ G ++
Sbjct: 275 EVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFHTCAVTA-----SGDLY 329
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G + G LG+G PK V+ +G + +S G HS + SG +FT G
Sbjct: 330 TWGDGYYNVGLLGNGAGASHWLPKRVSGPLEG--VQVLSVSCGSWHSALTTSSGKVFTFG 387
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHG + P +V + ++ACG+ HS +++ + + ++Y
Sbjct: 388 DGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYT 447
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G+G + QLG +GD+ + L
Sbjct: 448 WGAGDKNQLG----------------------------HGDKDSRLVP------------ 467
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C QSL SF Q A G + + L+ G V +G S +G L +P + +P+
Sbjct: 468 -----TCVQSL-IDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNP-KSDGKQPIP 520
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L G V +I+ G+ H AV+T + TWG G +G+LG G D+ P +V
Sbjct: 521 VQ----DRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLV-- 574
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 575 -EALKDRHVK-SIACGSNFTTCICIH 598
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 189/399 (47%), Gaps = 45/399 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+ G DG + D L+P+ L + + V + CG HV +T G+V
Sbjct: 227 EVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTR-----QGEV 281
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG G+LGHG VD PK V F I ++ G H+ VS SG LF+ GDG
Sbjct: 282 FTWGEEVGGRLGHGIQVDISRPKLVEFL--ALTNIDFVACGEYHTCVVSTSGDLFSWGDG 339
Query: 154 --TFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LGHG SH P +VS V +ACG HS + + +++ FG G
Sbjct: 340 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 396
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----------GDRSAALSAEGHLYTW 259
G LG SVS P+ L+ ++ V ++ + G + ++S+ L+TW
Sbjct: 397 GVLGHGNRE--SVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSR-KLFTW 453
Query: 260 GRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G G + ++ LP+ +S F + A G + LT G V +GG+ HG L
Sbjct: 454 GDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQL 513
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +S + + ++ L G V +IA GA H AV+T + TWG G +G+LG G
Sbjct: 514 GN--SISDGKLPCLVQDR---LVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHG 568
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T D+ P +V + ++R + + CGS FT +I H
Sbjct: 569 DTEDKRTPTLV---EALRDRHVK-SLSCGSNFTSSICIH 603
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 61/381 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG T G+LG G D P+L+ + ++V ++ACG H A+T + G+++
Sbjct: 296 EVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVT-----MDGELY 350
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LG+G V PK ++ +G + +++ G H+ +S +G LFT G
Sbjct: 351 TWGDGVHNAGLLGNGTDVSHWMPKRISGILEG--LQVAYVACGPWHTALISSTGQLFTFG 408
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD +S S P +V S +ACG+ H+ +++ + SGK
Sbjct: 409 DGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGK-- 466
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
T G D +G +GD+ L
Sbjct: 467 ---------------LFTWGDGDKNRLG---HGDKEPRLK-------------------- 488
Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P +P+ +F + A G + + LT G+V +G S +G L +P +P V
Sbjct: 489 PTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPH-ADGKQPCLVE--- 544
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
L G ++A GA H V+T + TWG G +G+LG G+ D+ P +V + +
Sbjct: 545 -DKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLV---ESLK 600
Query: 390 NRDTQLEVFCGSGFTYAISRH 410
++ ++ + CGS ++ AI H
Sbjct: 601 DKHVKI-IACGSNYSAAICLH 620
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
IA G HSA+VT + TWG G+LGLG D P++V E T V CG
Sbjct: 281 IACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLV----EALAATTVDLVACG 336
Query: 401 SGFTYAIS 408
T A++
Sbjct: 337 EFHTCAVT 344
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 163/377 (43%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3114 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3168
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I I+ G +HS +S G L+T G
Sbjct: 3169 VFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKK--IRDIACGSSHSAAISSQGELYTWGL 3226
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3227 GEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTED---GAVFSWGDGDF 3283
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + S P L I ++ I S AL+ G ++TWG+G
Sbjct: 3284 GKLG--RGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG-------- 3333
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H V +P +
Sbjct: 3334 --------------------------DYYRLGHGGDQH--------VRKPQP-------I 3352
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
+ L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L
Sbjct: 3353 AGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVIV 3412
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3413 NR-----VACGSSHSMA 3424
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 10/226 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+T+ G V
Sbjct: 4321 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4375
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4376 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4435
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4436 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4492
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ V P+ L +I+ I+ A S G ++TWG
Sbjct: 4493 --HGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWG 4536
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 4309 GGKHCLALTT-----DGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4361
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 4422 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4476
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4477 SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWG 4536
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4537 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4582
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 16/248 (6%)
Query: 37 WSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+SWG G +LG G H EL ++ +L L V + CG ++ A+T +GG +++
Sbjct: 668 YSWGVGDSRRLGHGDCHARELPTKIESLVRL--VKSVYCGCSYSAAIT-----LGGNLYT 720
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG+ G+LGHG D P V H+ + +G H+ ++ G +F GDG +
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG+G S P + V ++ G + SL L C G Q+Y +G +
Sbjct: 781 GKLGNGSCNSSLLPQLIDCL--PRVQRVFAGAQFSLAL--SCEG-QLYSWGKASCLGHQL 835
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
+ ++ S+P++ GL IV ++ ALS+ G ++ WGR N CP S+
Sbjct: 836 VERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI---CPASV 892
Query: 276 PSSLSFSQ 283
S Q
Sbjct: 893 CSEPLLRQ 900
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + RI++ + + L +++ G G++S A++ +G L+
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4271
Query: 260 GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
G G V S +P+ L Q G H L LT DGEV G G
Sbjct: 4272 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4331
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R+S RP + V +L+G+ V IA G+ HSA +T + ++TWG G +G+LG
Sbjct: 4332 KLGHGNRMSYDRP-----KLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLG 4386
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4387 HGDSEDQLRPKLVEALLGYR----AIDIACGSG 4415
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 161/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4216 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4270
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4271 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGED 4330
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 4331 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4387
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4388 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4445
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4446 GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRP--- 4502
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H ++ + TWG + GQLG G P++V
Sbjct: 4503 --KKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVA-- 4558
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4559 -ALQGKHI-VKVTCGSAHTLALS 4579
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 17/191 (8%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V +G + QLG K V +P + + + + I+ +S +G +Y G
Sbjct: 3063 VMVWGLNDKEQLGGLKGS--KVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3120
Query: 262 GFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML 311
G N T +V P LP + + G H L LT DG+V G G L
Sbjct: 3121 GTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKL 3180
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R + +P V L K+ IA G+ HSA ++ + TWG GE+G+LG G
Sbjct: 3181 GHGNRSTLDKP-----RLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHG 3235
Query: 372 NTCDQIHPKVV 382
+ Q+ PK+V
Sbjct: 3236 DNATQLKPKLV 3246
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 141/324 (43%), Gaps = 46/324 (14%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ +AC VL L+ GK+++W H +A P+ + F + T
Sbjct: 602 LQQVACSEDVVLLLSKE-----GKLYNW---------HIAKPEA-EPQQLDFAEIANETF 646
Query: 129 THISAGWNHSGFVS-DSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
I+A F++ DS ++ G G +LGHGD + P K+ S V + V + CG
Sbjct: 647 ISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLV-RLVKSVYCG 705
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGIS-AN 243
+S + LG +Y +G G G+LG S D+ LP + + L D ++V ++ +
Sbjct: 706 CSYSAAI---TLGGNLYTWGRGTYGRLGHGTSDDQ----CLPAMVMALKDHQVVDVALGS 758
Query: 244 GD-RSAALSAEGHLYTWGRG-FNSTSDVNC-----PQSLPSSLSFSQAALGWNHVLVLTG 296
GD + L++EG ++ WG G + + +C PQ + + G L L+
Sbjct: 759 GDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFAGAQFSLALSC 818
Query: 297 DGEVLMLGGS----HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+G++ G + H + + + S R ++ L +++ +A G H ++
Sbjct: 819 EGQLYSWGKASCLGHQLVERNVQGCSVPR-------LITGLQHKRIVDVAVGVAHCLALS 871
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQ 376
+ I WG ++ Q+ + C +
Sbjct: 872 SSGEIFGWGRNDNQQICPASVCSE 895
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
+++WG GT G+LG G D+ P + + L V + L G AH L LTS G V
Sbjct: 718 LYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSE-----GLV 772
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG G G+LG+G +L P+ + + + AG S +S G L++ G
Sbjct: 773 FAWGDGDYGKLGNGSCNSSLLPQLIDCLP----RVQRVFAGAQFSLALSCEGQLYSWGKA 828
Query: 154 TF--GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ QL + + S P ++ +K + +A G+ H L L +++G+G
Sbjct: 829 SCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSS---SGEIFGWGRNDNQ 885
Query: 212 QL 213
Q+
Sbjct: 886 QI 887
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 27/189 (14%)
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
++ ++ + D LS EG LY W + P++ P L F++ A +
Sbjct: 600 FQLQQVACSEDVVLLLSKEGKLYNW--------HIAKPEAEPQQLDFAEIANETFISIAA 651
Query: 295 TGDGEVLMLGGSHHGMLS----DPERV----SSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
+G + S+ S D R+ R L +E + L V + G
Sbjct: 652 HCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL----VKSVYCGCS 707
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+SA +T + TWG G +G+LG G + DQ P +V + Q D L GSG +
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVAL----GSGDAHT 763
Query: 407 ISRHCLPSQ 415
+ CL S+
Sbjct: 764 L---CLTSE 769
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 174/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ SL+ V +++CG H A+T+ G +F
Sbjct: 276 EVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTT-----SGDLF 330
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG GS G LG G V PK V+ +G + ++ G HS + SG L+T G
Sbjct: 331 NWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG--LQVLSVACGSWHSALTTSSGKLYTFG 388
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD + + P +V + ++ACG+ HS +++ + + ++Y
Sbjct: 389 DGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYT 448
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GD+ L +
Sbjct: 449 WGDGDKNRLG----------------------------HGDKEPRLVPK----------- 469
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L F Q A G N + L G V +G S +G L +P + +P
Sbjct: 470 ------CVQALLE-YDFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNP-KSDGKQPCL 521
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V S L V +I+ GA H V+T + TWG G +G+LG G+ D+ P +V
Sbjct: 522 VQDRLASEL----VEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLV-- 575
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 576 -EALKDRHVK-SISCGSNFTTCICIH 599
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 167/361 (46%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P + + ++V +ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----NGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH + +P+ + Y + IS G HS +S+ G + + GD
Sbjct: 61 VYACGSNDHSQLGH----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGD 116
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH D P V V+K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV+ + + + P L I + I+ G+ S +S G ++ WGR G N
Sbjct: 174 QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
++ P L + +L A G + LT +G V G +G L + P
Sbjct: 234 DEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ + +R + +G G GQLG +T + P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 142/304 (46%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + ++ G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG QLGH P+ + + V QI+CG RHSL L + QV +G
Sbjct: 64 CGSNDHSQLGHE--LPTKRPLLIPELQDYVVIQISCGSRHSLALSE---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + D+ V LP+V L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGHATDK-EIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS D+ N P L + L AA+ G NH +++ G V G ++ G L + +
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEAN 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P ++ L + V +A G E S +T + T G G +GQLG G + +++
Sbjct: 238 RAYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG D L L++L + + +ACGG H ++ G
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 218 AVFGWGRNNCGQLGLNDEANRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S+ LPQV IG
Sbjct: 334 QLGTRS--TKSLMLPQVVIG 351
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 119/274 (43%), Gaps = 51/274 (18%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q+ACG RH+L L + +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTAN---GKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
GS QLG R + +P+ L D ++ IS S ALS G + +WG
Sbjct: 64 CGSNDHSQLGHELPTKRPLLIPE----LQDYVVIQISCGSRHSLALSEWGQVLSWG---- 115
Query: 265 STSDVNCPQ----------SLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
D +C Q LP S + Q A G NH L LT GE+ G + +
Sbjct: 116 ---DNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 173 GQLGVNSPKDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNC 227
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + V GDEF
Sbjct: 228 GQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEF 261
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 178/388 (45%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ + S++ +ACG H A+T+ G+++
Sbjct: 97 EVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTT-----GELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ ++ +G I ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FG LGHG+ +S S P +V S +ACG+ H+ +
Sbjct: 210 DGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
+E++ +S+A + G L+TWG G
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ C SL F + A G + + LT G+V +G S +G L +P S RP
Sbjct: 284 KEARLKPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPN--SDGRP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + S V+QIA G+ H AV+T + TWG G +G+LG G+ D+ P V
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTV 396
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CG+ FT AI H
Sbjct: 397 ---EALRDRAVR-HIACGANFTAAICLH 420
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + G H+++VT N + TWG G+LG G D +HP++V
Sbjct: 77 LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLV 123
>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 1032
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 177/394 (44%), Gaps = 88/394 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG G G+LG D SP++++ S V +ACG H ALT G+V+
Sbjct: 324 EVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEYHTCALTD-----SGEVY 378
Query: 95 SWGRGSSGQLGHGEMVDA-------LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
+WG S ++VD L K +G +I+ I+ G H+ VS G L
Sbjct: 379 AWGNDVSC----SDLVDEGRIRSQWLTHKLSLPVEG--ISISSIACGEWHTAIVSSCGRL 432
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT GDGTFG LGHG Y S SSP +V S V +ACG H+
Sbjct: 433 FTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTAA--------------- 477
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----F 263
I+ ISA +R ++ G L+TWG
Sbjct: 478 -----------------------------IIEISA--ERFKYNTSTGKLFTWGDADEGRL 506
Query: 264 NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+VN + +P+ +S F Q + G L LT G+V +G + +G L +P
Sbjct: 507 GHADNVN--KLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPH-- 562
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ +V +E + + VK+I + G+ H AV+T + ++ TWG GE+G+LGLG+T ++
Sbjct: 563 --VKDRAVVVEGMLKQEYVKMI--SCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRY 618
Query: 378 HPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
P V RD Q++ + CG FT AI H
Sbjct: 619 TPCFVEAL-----RDRQVDTITCGPSFTVAICLH 647
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 194/424 (45%), Gaps = 57/424 (13%)
Query: 23 KIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAH 78
++EE ++ QV + ++ WG + GT + L P+ ++L++ + +ACGG H
Sbjct: 432 ELEEGDDATQVEEPSSCMYVWGRPPSLEGGTPLV---LRPKHVSLANGQPIVQVACGGEH 488
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP----------VTFFDGH---- 124
+L LTS G V+S+G ++ + P +F H
Sbjct: 489 LLYLTS-----TGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEE 543
Query: 125 --------RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
R TI ++ G HS ++D+G L+T G G G+LGHGD R + P KV S +
Sbjct: 544 LALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLL 603
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
++V +CG H+ VL V+ FG G+ G+LG+ ++ R P +G
Sbjct: 604 RESVVSASCGGAHTAVLTAK---GSVFTFGRGRNGRLGLGDNKWRDT--PHPIVGFPQGT 658
Query: 237 IVGISANG-DRSAALSAEGHLYTWGR---GFNSTSDVNCPQSLPSSL---------SFSQ 283
+ + G + +AAL +G ++TWG+ G V+ Q +P + S
Sbjct: 659 SISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVD 718
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G+ H +VLT GE+ G +G L + V P V L + ++ ++
Sbjct: 719 VACGYTHTVVLTASGELYSWGLGEYGQLGTGD-VYQPLPARVQLPADALCAPDQLARVYC 777
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
GA HS TE R + WG +G GLG+T ++ P+ + D F ++ T+L V CG +
Sbjct: 778 GAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERI---DCFSSQ-TELVVACGHKY 833
Query: 404 TYAI 407
T A+
Sbjct: 834 TIAL 837
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 181/389 (46%), Gaps = 77/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G + D + P+++ + SS+ +ACG H A+T I G+++
Sbjct: 301 EVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVT-----ITGELY 355
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK V+ +G +T ++ G H+ V+ G LFT G
Sbjct: 356 TWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEG--LQVTSVTCGPWHTALVTSMGQLFTFG 413
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHGD + S P +V S +ACG+ H+ +++ + +++
Sbjct: 414 DGTFGALGHGDRENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLF 473
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 474 TWGDGDKNRLG----------------------------HGDKEPRLK------------ 493
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P +P+ F + A G + + LT G+V +G + +G L +P S+
Sbjct: 494 --------PTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNP---SADG 542
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
+ +E L G V +++ GA H V+T + TWG G +G+LG G+ D+ P +
Sbjct: 543 KIPCLVE--DKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTL 600
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V + ++R + + CGS +T AI H
Sbjct: 601 V---EALKDRHVKY-IACGSNYTAAICLH 625
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 116/290 (40%), Gaps = 76/290 (26%)
Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
D L P+P+ D H HI+ G H+ V+ G +FT G+ + G+LGHG +
Sbjct: 267 TDVLLPRPLESNIVLDIH-----HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDV 321
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVS 224
P V S ++ +ACG H+ + + ++Y +G G G LG D S
Sbjct: 322 IQPRMVESLAASSIGFVACGEFHTCAV---TITGELYTWGDGTHNAGLLGHGSD--VSHW 376
Query: 225 LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQ 283
+P+ G L +++ ++ +A +++ G L+T+G G
Sbjct: 377 IPKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDG--------------------- 415
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
G HG D E +S + +V +L G++ I +A
Sbjct: 416 ------------------TFGALGHG---DRENISYPK-------EVESLSGLRTIAVAC 447
Query: 344 GAEHSAVVTE-----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
G H+A V E + + TWG G+ +LG G+ ++ P V
Sbjct: 448 GVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 497
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 157/326 (48%), Gaps = 27/326 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV+ G G +G+LG G + P L+ ++ V + GG H L +T GK
Sbjct: 2922 KVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITRE-----GK 2976
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG++ L P + + I I+ G +HS V+ G L+T G
Sbjct: 2977 VFSWGEGIDGKLGHGDVTSRLSPTLIEALESK--LIVEIACGSSHSAAVTADGELYTWGL 3034
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGKRG 211
G +G+LGHGD ++ P +V + + V IACG R + L L D N V+ +G G G
Sbjct: 3035 GDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTD--NNCVWSWGDGDFG 3092
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
+LG + ++PQ L ++ I+ S ALS G ++TWG+G +
Sbjct: 3093 KLG--RGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGN 3150
Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
S PQ + L ++ A+G H L +T GEV G + HG + + RP
Sbjct: 3151 DSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRP 3210
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
+ L LDGVK+ IA G+ HS
Sbjct: 3211 -QICL---GELDGVKISHIACGSSHS 3232
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 165/359 (45%), Gaps = 28/359 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG + SP ++ N+++L VS +A G V +T GKV
Sbjct: 2870 RVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS-IAGGSKTVFIVT-----YDGKV 2923
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ G G++G+LG G + P + + H + G HS ++ G +F+ G+G
Sbjct: 2924 YVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEG 2983
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHGD S SP + + +K + +IACG HS + D ++Y +G G G+L
Sbjct: 2984 IDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTAD---GELYTWGLGDYGRL 3040
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG-FNS---- 265
G +++ +P+ L D +++ I A G R A AL+ +++WG G F
Sbjct: 3041 GHGDS--KTLHIPKQVKALQDYKVIDI-ACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097
Query: 266 -TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ N PQ + + + A G L L+ G+V G + L P
Sbjct: 3098 GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSP 3157
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
+ L ++ +IA GA H VT+ + +WG +HGQ G GNT P++
Sbjct: 3158 QLIE----GPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQI 3212
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G +P+ + + ++CG +H A+TS G+++
Sbjct: 3877 EVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSK-----GELY 3931
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK + ++ +G + ++D C+++ GDG
Sbjct: 3932 TWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGD 3991
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+++ S + V ++ CG + S+ L K+ +Y +G G +LG
Sbjct: 3992 YGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKN---GDLYTWGKGDYYRLG 4048
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ D +R P+ L +IV ++A A + G ++TWG
Sbjct: 4049 HGTNDHVRR---PRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWG 4092
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG+G G+LG G + E P+L+ ++ +ACG + A+TS G++++
Sbjct: 534 VYSWGSGDGGRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVTS-----NGELYT 586
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRGS G+LGHG D L P V G +G H+ + G +++ GDG +
Sbjct: 587 WGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDY 646
Query: 156 GQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LG G P V + NK + + CG + S+ L KD V+ +G +L
Sbjct: 647 GKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD---GTVWTWGKSDGYRL 703
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G + V P++ GL + IV I+ AL+ ++TWG
Sbjct: 704 G--HGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG 748
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 177/387 (45%), Gaps = 35/387 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K + WG GQLG + SP + ++ + + +A G + LTS GKV+
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSE-----GKVY 3825
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G SG+LG G + + P + + + +G H+ ++ + +F+ GDG
Sbjct: 3826 ASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGE 3885
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
G+LGHGD S +P K+ + + K + I+CG HS + ++Y +G G+ G+L
Sbjct: 3886 DGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSK---GELYTWGKGRYGRLG 3942
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRG----FNST 266
G D ++ P++ L +++ ++ +GD ++ A++ + +++WG G
Sbjct: 3943 HGDGDDCLK----PKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG 3998
Query: 267 SDVNCPQSLPSS----LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C + L ++ + G + LT +G++ G + L RP
Sbjct: 3999 GSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRP 4058
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV+ L G +++ +AAG+ H T+ + TWG + GQLG G P +V
Sbjct: 4059 -----RKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLV 4113
Query: 383 NLGDEFQ-NRDTQLEVFCGSGFTYAIS 408
+ + + NR V CGS ++A S
Sbjct: 4114 TVLENVKLNR-----VGCGSAHSFAWS 4135
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 119/288 (41%), Gaps = 63/288 (21%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H LAL+S G V+SWG G G+LGHG+ + +P + IT I+ G
Sbjct: 522 GEHYLALSS-----DGCVYSWGSGDGGRLGHGD----IRREPELVKELVNKKITQIACGS 572
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVL 193
+S V+ +G L+T G G++G+LGHG+ P V+ +V +ACG H+L +
Sbjct: 573 TYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAI 632
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
KD + V+ +G G G+LG V T+ H+ IV + S AL +
Sbjct: 633 DKDGI---VWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD 689
Query: 254 GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G ++TWG+ DG L HG L D
Sbjct: 690 GTVWTWGKS----------------------------------DGYRL-----GHGTL-D 709
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
R + V L ++ IA G H +T+N I TWG
Sbjct: 710 HVRYP---------KMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWG 748
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 25/321 (7%)
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
I +VF WG GQLG + P + R I+ G V+ G ++
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPV--SIAGGSKTVFIVTYDGKVY 2924
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFG 206
G+G G+LG G+ + S PV++ + V ++ G RHSL + ++ +V+ +G
Sbjct: 2925 VSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITRE---GKVFSWG 2981
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
G G+LG + S P + L IV I+ SAA++A+G LYTWG G
Sbjct: 2982 EGIDGKLG--HGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGR 3039
Query: 263 --FNSTSDVNCPQSLPSSLSFSQAALGWN----HVLVLTGDGEVLMLGGSHHGMLSDPER 316
+ ++ P+ + + + + L LT + V G G L
Sbjct: 3040 LGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGS 3099
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
P +K+ L G V +IA GA+ S ++ + TWG G++ +LG GN
Sbjct: 3100 EGCNIP-----QKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154
Query: 377 IHPKVVNLGDEFQNRDTQLEV 397
P+++ G + R T++ V
Sbjct: 3155 RSPQLIE-GPLKKKRITEIAV 3174
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G+ G+LG G D L P L+ S S V +ACG AH LA+ G
Sbjct: 583 ELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDK-----DGI 637
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG G PK V H I ++ G S + G ++T G
Sbjct: 638 VWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGK 697
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+LGHG P V +N ++ IA G H L L +C Q++ +GS
Sbjct: 698 SDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNC---QIFTWGS 749
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGH 255
+ ++V+ +G +GQLG K +++S + + L + I G G ++ + + +G
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAG----GSKTVFIVTYDGK 2922
Query: 256 LYTWGRGFN------STSDVNCPQSLPS-SLSFSQAAL---GWNHVLVLTGDGEVLMLGG 305
+Y G G N +T +++ P L + ++ F + G H L +T +G+V G
Sbjct: 2923 VYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L + S P + L+ +++IA G+ HSA VT + + TWG G++
Sbjct: 2983 GIDGKLGHGDVTSRLSP-----TLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+LG G++ PK V +++ +++ CGS
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYK----VIDIACGS 3069
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
+ QI C + + L + +VY R + V D L DI+I
Sbjct: 471 IKQIMCSSDNIIALTNN---GRVYSLAYNARCEAPVLLD------------SLIDIKIKK 515
Query: 240 ISAN--GDRSAALSAEGHLYTWGRGFNST---SDVNCPQSLPSSL---SFSQAALGWNHV 291
I+AN G+ ALS++G +Y+WG G D+ L L +Q A G +
Sbjct: 516 IAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKITQIACGSTYS 575
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSA 349
+T +GE+ G +G L P VA L G V+ +A G+ H+
Sbjct: 576 AAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVA-----GLSGSHVVDVACGSGDAHTL 630
Query: 350 VVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVVNLGDEFQNRDTQL-EVFCGSGFTYAI 407
+ ++ + +WG G++G+LG G + C ++ PKVV + ++ + + V CGS F+ A+
Sbjct: 631 AIDKDGIVWSWGDGDYGKLGRGGSDCCKV-PKVV---ETLKHHNKYIVNVLCGSQFSVAL 686
Query: 408 SR 409
+
Sbjct: 687 GK 688
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 168 SPVKVSSFVNKNVHQIACGMR--HSLVLLKD-CLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
+PV + S ++ + +IA + H L L D C VY +GSG G+LG R
Sbjct: 501 APVLLDSLIDIKIKKIAANVEGEHYLALSSDGC----VYSWGSGDGGRLGHGDIRRE--- 553
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
P++ L + +I I+ SAA+++ G LYTWGRG ++ D P +L +
Sbjct: 554 -PELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLP-TLVAG 611
Query: 279 LSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
LS S G H L + DG V G +G L P V K N
Sbjct: 612 LSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHN- 670
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKVV 382
++ + G++ S + ++ + TWG + +LG G T D + +PK+V
Sbjct: 671 --KYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHG-TLDHVRYPKMV 717
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 165/362 (45%), Gaps = 30/362 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
++++ WG + GQLG G + DE L+P + S+V+ +ACG H L LT+ G
Sbjct: 1 MELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTA-----SG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KV++ G QLGH + +P+ + Y IT I+ G HS +++ G + + G
Sbjct: 56 KVYACGSNDYSQLGH----ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWG 111
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
D GQLGH D P V V+K V QIACG HSL L C G ++Y +GS
Sbjct: 112 DNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL--TCCG-ELYSWGSNIY 168
Query: 211 GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLGV S + + P L I I+ G+ + +S ++ WGR G
Sbjct: 169 GQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N ++ P L + +L A G + LT +G V G +G L +
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 288
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPK 380
P V L G + Q+A G H+ + +R I +G G GQLG NT P+
Sbjct: 289 P-----RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQ 343
Query: 381 VV 382
VV
Sbjct: 344 VV 345
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP--QLLNLSSLSSV--SMLACGGAHVLALTSPSSVIG 90
+++SWG+ GQLG + ELS + L++L + + +ACGG H ++ S+V G
Sbjct: 159 ELYSWGSNIYGQLGV-KSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFG 217
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
WGR + GQLG + + YP + + ++ G S F+++ G +FTC
Sbjct: 218 -----WGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTC 270
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +GQLGHG + P V + + Q+ACG RH+L L+ ++YGFG G
Sbjct: 271 GAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPS--RGRIYGFGLGSS 328
Query: 211 GQLGVSKDRIRSVSLPQVTIG 231
GQLG +S++LPQV IG
Sbjct: 329 GQLGTRN--TKSLNLPQVVIG 347
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 118/268 (44%), Gaps = 39/268 (14%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G+ + GQLG G +P ++ + V+Q+ACG RH+L L +VY
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTA---SGKVYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
GS QLG R + +P+ L D I I+ S AL+ G + +WG
Sbjct: 60 CGSNDYSQLGHELPTKRPLQIPE----LEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 263 --FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGML--- 311
SD + Q LP + + Q A G NH L LT GE+ G + +G L
Sbjct: 116 GQLGHASDQDVIQ-LPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
S E P+ +++ L G+ IA G H+ +++++ A+ WG GQLGL
Sbjct: 175 SPSELSQCNYPM-----RLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLN 229
Query: 372 NTCDQIHP-----------KVVNLGDEF 388
+ ++ +P + V GDEF
Sbjct: 230 DETNRAYPTQLKTLRTLGVRFVACGDEF 257
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 155/332 (46%), Gaps = 30/332 (9%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
S +V +++ G +H +AL + G + SWGRG GQLGHG+ D L P ++ FD
Sbjct: 10 SPPQTVVLVSAGASHSVAL-----LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDA 64
Query: 124 HRYTITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
IT + G +H+ + D +++ G G FG+LGHG+ +P V + + Q
Sbjct: 65 P--AITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 122
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
IACG H L + + +V +G + GQLG+ ++D + LPQ + + I
Sbjct: 123 IACGDSHCLAV---TMAGEVQSWGRNQNGQLGLGTTEDSL----LPQKIQAFESVCVKMI 175
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVL 292
+A + +AA++ +G LY WG G +D P+ + S A GW H +
Sbjct: 176 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTI 235
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ G + G S +G L + P KV L + QI+ G H+ +T
Sbjct: 236 TVSDSGNLYTYGWSKYGQLGHGDFEDHLVP-----HKVEALKDSTISQISGGWRHTMALT 290
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ WGW + GQ+G+GN D P V+
Sbjct: 291 SEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 14/196 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + V M+A G H A+T G ++
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTED-----GDLY 192
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ V+ +G + + ++ GW H+ VSDSG L+T G
Sbjct: 193 GWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVL--VACGWRHTITVSDSGNLYTYGWSK 250
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H P KV + + + QI+ G RH++ L + ++YG+G K GQ+G
Sbjct: 251 YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE---GKLYGWGWNKFGQVG 307
Query: 215 VSKDRIRS----VSLP 226
V + S VS P
Sbjct: 308 VGNNDDHSSPGQVSFP 323
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 133/272 (48%), Gaps = 21/272 (7%)
Query: 14 SALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA 73
+++I A E+E QV +SWG G G+LG G D +PQ + + +A
Sbjct: 68 TSVICGADHTTAYSEDELQV---YSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
CG +H LA+T + G+V SWGR +GQLG G D+L P+ + F+ + I+A
Sbjct: 125 CGDSHCLAVT-----MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFE--SVCVKMIAA 177
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G H+ V++ G L+ G G +G LG GD P KVSS + + +ACG RH++ +
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
GN +Y +G K GQLG +P L D I IS + AL++E
Sbjct: 238 SDS--GN-LYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292
Query: 254 GHLYTWGRGFNSTSDV----NCPQSLPSSLSF 281
G LY W G+N V N S P +SF
Sbjct: 293 GKLYGW--GWNKFGQVGVGNNDDHSSPGQVSF 322
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 150/331 (45%), Gaps = 28/331 (8%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G D L P +L+ +++ + CG H A + +V+SWG
Sbjct: 36 SWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDEL----QVYSWG 91
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P+PV G + I I+ G +H V+ +G + + G GQ
Sbjct: 92 WGDFGRLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-- 215
LG G P K+ +F + V IA G H+ + +D +YG+G G+ G LG+
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTED---GDLYGWGWGRYGNLGLGD 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
DR+ LP+ + ++V ++ + +S G+LYT+G G D
Sbjct: 207 RNDRL----LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P + + + SQ + GW H + LT +G++ G + G + + P V+
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
NL G ++ HS + E + ++
Sbjct: 323 PGSENLPGCMRMEA-----HSGPLREEKCLL 348
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T+ +SAG +HS + L + G G GQLGHGD P +S F + + CG
Sbjct: 14 TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICG 73
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H+ +D L QVY +G G G+LG V PQ L ++I I+
Sbjct: 74 ADHTTAYSEDEL--QVYSWGWGDFGRLGHGNSS--DVFTPQPVKALQGLKIKQIACGDSH 129
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG 298
A++ G + +WGR G +T D PQ + + S+ A G H +T DG
Sbjct: 130 CLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDG 189
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
++ G +G L +R P EKVS+++G K++ +A G H+ V+++ +
Sbjct: 190 DLYGWGWGRYGNLGLGDRNDRLLP-----EKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244
Query: 359 TWGWGEHGQLGLGNTCDQIHP-KVVNLGD 386
T+GW ++GQLG G+ D + P KV L D
Sbjct: 245 TYGWSKYGQLGHGDFEDHLVPHKVEALKD 273
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 397
V+ ++AGA HS + + +WG GE GQLG G+ D++ P V++ D V
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDA----PAITSV 70
Query: 398 FCGSGFTYAISR 409
CG+ T A S
Sbjct: 71 ICGADHTTAYSE 82
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 182/405 (44%), Gaps = 53/405 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G GQLG +++ SPQ + S ++ + + +AL+ GKV++
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQD-----GKVYT 99
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ G LGH ++ +P I IS G H +S G L+T G+
Sbjct: 100 WGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDH 159
Query: 156 GQLGHG-----------------DYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
G+LGH DY S P KV S Q++CG + ++VL ++
Sbjct: 160 GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTEN- 218
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+VY FG+ +GQLG + + P+ L + I+ I SAA+S+ G +Y
Sbjct: 219 --GEVYSFGNSMKGQLGYQSEETGNFQ-PKKIPDLQN--IINIDCGQQFSAAVSSSGKVY 273
Query: 258 TWGRGFNST--SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
TWG + ++ + Q+ P+ ++ + G N + L+ +G++ G + G
Sbjct: 274 TWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDG 333
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R P + ++ K+I++ G H+A +T+N + +G G GQLG
Sbjct: 334 QLGHSNRNDLYAPKQIEFKE-------KIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG 386
Query: 370 LGNTCD-----QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+G + + PK+V EF + ++V CG +T AI+
Sbjct: 387 IGENIESEAAIRTTPKIV----EFFKKMKVVDVTCGGEYTLAITE 427
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 180/389 (46%), Gaps = 77/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G+LG G D P+L+ S +++ ++ACG H A+T + G ++
Sbjct: 332 EVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVT-----LSGDLY 386
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ V+ SG LFT G
Sbjct: 387 TWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 444
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P ++ S Q ACG+ H+ +++ +GN ++
Sbjct: 445 DGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKL 504
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ + L +
Sbjct: 505 FTWGDGDKGRLG----------------------------HGDKESKLVPTCVV------ 530
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + NC Q A G + + L+ G V +G +G L + + P
Sbjct: 531 --TLVEPNC-----------QVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQ-ADGKLP 576
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 577 IRVE----GKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLV 632
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 633 EAL-----KDKQVKSIACGTNFTAAICLH 656
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 177/381 (46%), Gaps = 46/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H +T G++F+WG S G+LGHG D L
Sbjct: 295 DSLLPKALESAVVLDVQNIACGGRHAALVTKQ-----GEIFTWGEESGGRLGHGVDSDVL 349
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
PK V I +S G H+ V+ SG L+T GDGT FG LGHG+ SH P K
Sbjct: 350 QPKLVDALGN--TNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKK 407
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
++ + +V IACG H+ V+ Q++ FG G G LG DR SV++P+
Sbjct: 408 INGPLEGIHVSSIACGPWHTAVVTS---AGQLFTFGDGTFGVLG-HGDR-GSVTMPREVE 462
Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWG--------RGFNSTSDVN 270
L + V + +AA+ + G L+TWG G T V
Sbjct: 463 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVP 522
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ +F + + G + + LT G V +G +G L +P P+ V
Sbjct: 523 TCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPH-ADGKVPVRVE---- 577
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L V +IA GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 578 GKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVE-----AL 632
Query: 391 RDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 633 KDKQVKSIACGTNFTAAICLH 653
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 159/337 (47%), Gaps = 34/337 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG + G+LG G D L P+L++ +++ +++CG H A+T + G ++
Sbjct: 328 EIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVT-----LSGDLY 382
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK + +G ++ I+ G H+ V+ +G LFT G
Sbjct: 383 TWGDGTYNFGLLGHGNEVSHWIPKKINGPLEG--IHVSSIACGPWHTAVVTSAGQLFTFG 440
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD S + P +V S + ACG+ H+ +++ +G+ ++
Sbjct: 441 DGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 500
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G +G+LG + V P L D +S + AL+ GH+YT
Sbjct: 501 FTWGDGDKGRLGHGDKETKLV--PTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSP 558
Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ N +D P + LS S + A G HV VLT EV G +G L
Sbjct: 559 VYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 618
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L +V IA G +A +
Sbjct: 619 DTDDRNSPTLVEA-----LKDKQVKSIACGTNFTAAI 650
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 182/413 (44%), Gaps = 33/413 (7%)
Query: 11 KGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS 70
K +A ++N E+E E++V WS G + G+LG G S + + +
Sbjct: 542 KPPNAFVSNDTTIFHEDEGEREV---WSCGQNSYGELGHGDTASRKSFERIQALQQKEII 598
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
+ G H + LT+ GKVF+ G +GQ G G + + D + H
Sbjct: 599 QIGAGNEHTVVLTA-----DGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGS-SQAH 652
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
G H+ VS G + TCG GQLGHG+ S S P + S NK V ++C H+
Sbjct: 653 AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 712
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
++ +D +Y FG GQLG + R + PQ L D +IV ++ + +
Sbjct: 713 VLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTMVV 770
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
+A G + +G+ G ++ + P + L + G+ H + L +
Sbjct: 771 TASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLF 830
Query: 302 MLGGSHHGMLS-DPERVSSTRPLSVALEKVSN------LDGVKVIQIAAGAEHSAVVTEN 354
G + +G L SST L + ++ SN L+G +++IA G H+ V++N
Sbjct: 831 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 890
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ +G HGQLG G+T ++++P + D+F + L +GF + +
Sbjct: 891 GVMYVFGRNNHGQLGTGDTTERVYPFPI---DDFVGKRVAL---VAAGFYHTV 937
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 17 INNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDELSP-Q 59
I+ P+ E +QQ+V K +++G GQLG + ++L+P Q
Sbjct: 741 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQ 800
Query: 60 LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG----------EM 109
+ + CG H +AL S G +F++GR GQLG G ++
Sbjct: 801 VRGGLERQECLEIRCGYYHTIALCS-----GAHLFAFGRNDYGQLGLGRSNASSTSNLQL 855
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
+ + I I+ G H+ VSD+G ++ G GQLG GD P
Sbjct: 856 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP 915
Query: 170 VKVSSFVNKNVHQIACGMRHSLVL 193
+ FV K V +A G H++VL
Sbjct: 916 FPIDDFVGKRVALVAAGFYHTVVL 939
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 160/353 (45%), Gaps = 28/353 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G D SP L+ + + CG H +A + +V+SWG
Sbjct: 34 SWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRL----EVYSWG 89
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG D P P+ H I I+ G +H V+ G + + G GQ
Sbjct: 90 WGDFGRLGHGNSSDLFTPLPIKAL--HGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQ 147
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G+ P K+ +F + +A G H+ + +D +YG+ GK + G+S
Sbjct: 148 LGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGW-DGKIWKFGIS- 202
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY--------TWGRGFNSTSDV 269
DR + L + + D++ G S L + +L+ TW G +
Sbjct: 203 DRNDRLFLKEYLCCVRDVD--GAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLT 260
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
N +S ++ FSQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 261 NWKRS--ATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 317
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ P ++
Sbjct: 318 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNII 366
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 36/352 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ D H+ I
Sbjct: 13 VLIISAGASHSVALLS-----GEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQ--I 65
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S S +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 66 VSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGD 125
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + D +V +G + GQLG+ ++D + +PQ I I ++A +
Sbjct: 126 SHCLAVTMD---GEVQSWGRNQNGQLGLGNTEDSL----VPQKIQAFEGIRIKMVAAGAE 178
Query: 246 RSAALSAEGHLYTW-GRGFN-STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
+AA++ +G LY W G+ + SD N L L + G V+ L+
Sbjct: 179 HTAAVTEDGDLYGWDGKIWKFGISDRNDRLFLKEYLCCVRDVDG----AVMQPHISFLLW 234
Query: 304 GGSHHGMLSDPERVSSTRPLSVA-----LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ M E++ TR + L QI+ G H+ +T + +
Sbjct: 235 SIIYLWM----EQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLY 290
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
WGW + GQ+G+GN DQ P V D+ ++V CG T A++
Sbjct: 291 GWGWNKFGQVGVGNNLDQCSPVQVRFPDD----QKVVQVSCGWRHTLAVTER 338
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 62/283 (21%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 80 QSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVT-----MD 134
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 135 GEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 192
Query: 151 GDGTFGQLGHGD----------------------------------------------YR 164
DG + G D +R
Sbjct: 193 -DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWR 251
Query: 165 SHSSPVKVSSF---VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
SP ++++ QI+ G RH++ L D ++YG+G K GQ+GV + +
Sbjct: 252 LGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSD---GKLYGWGWNKFGQVGVGNN-LD 307
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
S QV D ++V +S + A++ +++ WGRG N
Sbjct: 308 QCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 349
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ WG GQ+G G D+ SP + V ++CG H LA+T ++ VF
Sbjct: 288 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNN-----VF 342
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV 118
+WGRG++GQLG GE +D P +
Sbjct: 343 AWGRGTNGQLGIGESLDRNSPNII 366
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQ---AAL 286
+++ ISA S AL + + +WGRG + D + P L S+L Q
Sbjct: 12 KVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQL-SALDEHQIVSVTC 70
Query: 287 GWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H + + EV G G L PL + L GV + QIA G
Sbjct: 71 GADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPL-----PIKALHGVMIKQIACGD 125
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
H VT + + +WG ++GQLGLGNT D + P+ +
Sbjct: 126 SHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQ 163
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 396
KV+ I+AGA HS + + +WG GE GQLG G+ D+ P ++ DE Q +
Sbjct: 12 KVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQ----IVS 67
Query: 397 VFCGSGFTYAISRHCL 412
V CG+ T A S+ L
Sbjct: 68 VTCGADHTVAYSQSRL 83
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 26/352 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG--KV 93
V SWG G DGQLG G D PQ + + + CG + +A V GG +V
Sbjct: 31 VLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMA------VAGGDKQV 84
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG G G+LG G++ D P P+ G R + ++ G H+ + G LF G
Sbjct: 85 YSWGWGDFGRLGTGDVKDVFIPCPLPALAGRR--VASVACGDTHTLVATAEGQLFAFGRN 142
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQ G G + P V++ K V +ACG HS+ + + +VY +G G+ G +
Sbjct: 143 QNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSE---GEVYCWGWGRYGNI 199
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST------S 267
G + + R LP + GL +++ ++ S A+ G +YTWG G +
Sbjct: 200 GDGESQDRH--LPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRK 257
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
D P+ + + + A GW H + G + G + G R +
Sbjct: 258 DHYVPKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVR-----V 312
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
++V L G +V+Q+ +G +H+ VT +WG +GQLG D P
Sbjct: 313 QQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSP 364
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 23/320 (7%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LACG +H LAL S S G V SWGRG GQLGHG+ D P+ V T H
Sbjct: 12 LACGSSHSLALISTPS--GSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHC 69
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
A ++ + D +++ G G FG+LG GD + P + + + V +ACG H+L
Sbjct: 70 GAEYSMAVAGGDKQ-VYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL 128
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
V + Q++ FG + GQ G+ I+ PQ+ L E+V ++ + S ++
Sbjct: 129 VATAE---GQLFAFGRNQNGQCGLGS--IQDCLEPQLVTALQGKEVVAVACGAEHSMCVT 183
Query: 252 AEGHLYTWGRG-FNSTSDVNC-PQSLPS------SLSFSQAALGWNHVLVLTGDGEVLML 303
+EG +Y WG G + + D + LP+ + +Q GW H + + G +
Sbjct: 184 SEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTW 243
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + L +R P V E V +V +A G H+ + GW
Sbjct: 244 GWGAYAQLMQGDRKDHYVPKRV--EAVQ-----QVATVAGGWRHTMAADSQGRLFASGWN 296
Query: 364 EHGQLGLGNTCDQIHPKVVN 383
+ GQ G+G+ D + + V
Sbjct: 297 KFGQCGVGHNEDVVRVQQVE 316
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++++G +GQ G G + D L PQL+ V +ACG H + +TS G+V+
Sbjct: 135 QLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSE-----GEVY 189
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G +G GE D P +G + + ++ GW HS V + G ++T G G
Sbjct: 190 CWGWGRYGNIGDGESQDRHLPTLAKGLEGVK--VAQVNCGWRHSIAVDEGGAMYTWGWGA 247
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+ QL GD + H P +V + + V +A G RH++ D G +++ G K GQ G
Sbjct: 248 YAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHTMA--ADSQG-RLFASGWNKFGQCG 302
Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
V ++D +R Q L +V + + + A++ G ++WGR N
Sbjct: 303 VGHNEDVVRV----QQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGM 358
Query: 267 SDVNCPQSLPS 277
D N P L +
Sbjct: 359 QDSNSPVELAA 369
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Takifugu rubripes]
Length = 3883
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 161/341 (47%), Gaps = 35/341 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ P+ L L ++ VS H LA+T + G+
Sbjct: 433 VKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAIT-----VDGE 487
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
VFSWG G G+LGHG YPK G ++ + SAG+ HS V+ G L+T
Sbjct: 488 VFSWGDGEYGKLGHGNSATQKYPK---IIQGPLFSKIVVSASAGYRHSAAVTKDGELYTW 544
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+G FG+LGH D +S + P V V Q+ACG H++ + +D G V+ FG G
Sbjct: 545 GEGDFGRLGHSDSQSRNMPTLVKDI--SGVGQVACGSSHTIAVAQD--GRTVWSFGGGDN 600
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNST 266
G+LG V P+V LH I + A S AL++ G ++ WG G S+
Sbjct: 601 GKLG--HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 658
Query: 267 SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRP 322
+ LS ++ + G +H L L+ + EV G + G + TRP
Sbjct: 659 ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRP 718
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV L+GV + QI AG HS V +R ++ W
Sbjct: 719 -----KKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 165/363 (45%), Gaps = 34/363 (9%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGG-AHVLALTSPSSVIGGKVFSW 96
G G G+LG G D P +++ V+ L +CG H +ALT G+VFSW
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTE-----TGEVFSW 3129
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G G G+LGHG PK + G + ++ G+ HS V+ G LFT G G G
Sbjct: 3130 GDGDFGKLGHGNNERQRRPKQIEALQGE--DVVQLACGFRHSAVVTADGKLFTFGSGESG 3187
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG + P +V++ +V Q++CG+ H+LVL D G V+ FG G G+LG
Sbjct: 3188 RLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLD--GMAVWAFGDGDYGKLGAG 3245
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNST--SDVN 270
+ PQ L + + + S ++ +GH+YT+G+ G + + +
Sbjct: 3246 SSTAKYY--PQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRS 3303
Query: 271 CPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
PQ +PS L A+G HVL L+ G+V G + G L + P+
Sbjct: 3304 NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLG----LGHCNPVKEP-T 3358
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG-------NTCDQIHPKV 381
++ L G + QI+AG HS+ T G + QLGL NT P+V
Sbjct: 3359 LITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQSVPPQYNTLKDCSPRV 3418
Query: 382 VNL 384
+++
Sbjct: 3419 LSM 3421
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 167/379 (44%), Gaps = 39/379 (10%)
Query: 19 NAKPKIEEEEEEQQVVKVWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACG 75
N +P E+ +E V+ WG G GQL GT L+P SLS + CG
Sbjct: 3008 NVRP---EDWQEGGKSDVYLWGNGRYGQLAGTGTNLTVPTLAP------SLSQTQQVVCG 3058
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
+ S G V + G G G+LG G D P ++ F G+ T S G
Sbjct: 3059 QNCSFLIQS-----NGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGS 3113
Query: 136 N-HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+ HS ++++G +F+ GDG FG+LGHG+ P ++ + ++V Q+ACG RHS V+
Sbjct: 3114 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVT 3173
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
D +++ FGSG+ G+LG + + LP+ L + +S + + LS +G
Sbjct: 3174 AD---GKLFTFGSGESGRLG--QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDG 3228
Query: 255 HLYTWG--------RGFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLG 304
+ W G S++ PQ + + + G +V+ DG V G
Sbjct: 3229 -MAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG 3287
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
L D + + P + V +L+G+ + IA G EH ++ + WG
Sbjct: 3288 QERLIGLPDSMLKNRSNP-----QVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNS 3342
Query: 365 HGQLGLGNTCDQIHPKVVN 383
GQLGLG+ P ++
Sbjct: 3343 EGQLGLGHCNPVKEPTLIT 3361
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 145/328 (44%), Gaps = 32/328 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+ WG SS QL G + L PK F + I AG + VS G + CG
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQT----IEAGQYCTFSVSTDGSVKACGK 438
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGK 209
G++G+LG GD + S P K+ ++N+ +++ H+L + D +V+ +G G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVD---GEVFSWGDGE 495
Query: 210 RGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
G+LG + P++ G L +V SA SAA++ +G LYTWG G
Sbjct: 496 YGKLGHGNSATQKY--PKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLG 553
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGMLSDPERVSSTR 321
+ + N P + Q A G +H + + DG V GG +G L + R
Sbjct: 554 HSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYR 613
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPK 380
P + + L G + ++ AG++ S +T + WG G LG G++ + P+
Sbjct: 614 P-----KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPR 666
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
V E + +++ CG A+S
Sbjct: 667 FV----EDLSITKIIDISCGDSHCLALS 690
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 25/272 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++ G+G +GQL G + + P S Q+ CG S ++ + + V G
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSL--SQTQQVVCGQNCSFLIQSNGV---VTAVG 3075
Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G+ G+LG + D + ++ G ++V + S AL+ G +++WG G F
Sbjct: 3076 EGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3135
Query: 265 STSDVNCP-QSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
N Q P + Q A G+ H V+T DG++ G G L +R
Sbjct: 3136 KLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--QRS 3193
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT-ENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L E+V+ L+G V Q++ G H+ V++ + A+ +G G++G+LG G++ +
Sbjct: 3194 TSNKMLP---ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAK 3250
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+P+ V ++ N+ + +V CG+ F+ ++
Sbjct: 3251 YYPQKV---EQLCNKGMK-KVCCGAQFSVVVA 3278
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 54/206 (26%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++++G+G G+LG +++ P+ + V ++CG H L L S+ G V+
Sbjct: 3177 KLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVL----SLDGMAVW 3232
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFF--------------------DGHRYT------- 127
++G G G+LG G YP+ V DGH YT
Sbjct: 3233 AFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLI 3292
Query: 128 -----------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
I I+ G H +S +G ++ G + GQLG G
Sbjct: 3293 GLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCN 3352
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHS 190
P +++ KN+ QI+ G HS
Sbjct: 3353 PVKEPTLITALQGKNIKQISAGRCHS 3378
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 176/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ ++S+V +ACG H A+T+ G ++
Sbjct: 263 EVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITA-----SGDLY 317
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LGHG PK V+ +G + +S G HS + SG +FT G
Sbjct: 318 TWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEG--VQVLSVSCGSWHSALTTSSGKVFTFG 375
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHG+ + + P +V + ++ACG+ HS +++ + + +++
Sbjct: 376 DGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFT 435
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G+G + LG +GD+ A L
Sbjct: 436 WGAGDKNPLG----------------------------HGDKDARLVP------------ 455
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C QSL +F Q A G + + L+ G V +G S +G L +P + P
Sbjct: 456 -----TCVQSL-IDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNP-KSDGKHPTP 508
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L G V +I+ G+ H AV+T + TWG G +G+LG G D+ P +V
Sbjct: 509 VQ----DRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLV-- 562
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 563 -EALKDRHVK-SIACGSNFTTCICIH 586
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 101/239 (42%), Gaps = 55/239 (23%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P + S V +V QIACG RH + + +V+ +G G+LG D +S P++
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQ---GEVFAWGEELGGRLGHGTDA--DISRPKL 288
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGW 288
L + ++ + A++A G LYTWG G+ +
Sbjct: 289 VEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAG--------------------- 327
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
L G G G+ H + P+RVS L+GV+V+ ++ G+ HS
Sbjct: 328 -----LLGHG-----AGTSHWL---PKRVSGP------------LEGVQVLSVSCGSWHS 362
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
A+ T + + T+G G G LG GN +PK V F+ ++V CG + AI
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRT----IKVACGLWHSAAI 417
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 125/341 (36%), Gaps = 86/341 (25%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
G V+ WG GS+ L D L PKP+ D + I+ G+ H
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLC--SKADILIPKPLESDVVLD-----VQQIACGYRHI 255
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ G +F G+ G+LGHG S P V + NV +ACG H+ +
Sbjct: 256 ALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITA--- 312
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLY 257
+Y +G G + S LP+ G L ++++ +S SA ++ G ++
Sbjct: 313 SGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVF 372
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T+ GDG LG + ++ P+ V
Sbjct: 373 TF------------------------------------GDGTFGALGHGNRHTVAYPKEV 396
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGWGEHGQ 367
+ L G + I++A G HSA + E +R + TWG G+
Sbjct: 397 ET-------------LSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNP 443
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
LG G+ ++ P V ++ +V CG T A+S
Sbjct: 444 LGHGDKDARLVPTCVQSLIDYNFH----QVACGHSMTIALS 480
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 61/381 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG T G+LG G D P+L+ + ++V ++ACG H A+T + G+++
Sbjct: 257 EVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVT-----MDGELY 311
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LG+G V PK ++ +G + +++ G H+ +S +G LFT G
Sbjct: 312 TWGDGVHNAGLLGNGTDVSHWMPKRISGILEG--LQVAYVACGPWHTALISSTGQLFTFG 369
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD S S P +V S +ACG+ H+ +++ + SGK
Sbjct: 370 DGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGK-- 427
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
T G D +G +GD+ L
Sbjct: 428 ---------------LFTWGDGDKNRLG---HGDKEPRLK-------------------- 449
Query: 272 PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P +P+ +F + A G + + LT G+V +G S +G L +P +P V
Sbjct: 450 PTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPH-ADGKQPCLVE--- 505
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
L G ++A GA H V+T + TWG G +G+LG G+ D+ P +V + +
Sbjct: 506 -DKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLV---ESLK 561
Query: 390 NRDTQLEVFCGSGFTYAISRH 410
++ ++ + CGS ++ AI H
Sbjct: 562 DKHVKI-IACGSNYSAAICLH 581
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V++WG G +G+LG G + D SP L+ V ++ACG + A+ S+ G
Sbjct: 531 EVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSG 586
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 159/356 (44%), Gaps = 37/356 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G + L+P + + L+ V+ +A G H LA+ G V+
Sbjct: 177 TVWAWGDNAWGQLGDGTRTNRLTP--VQVPGLTGVTAIAAGDYHTLAVRQD-----GTVW 229
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G + L P V G +T ISAG +H+ V G ++ GD
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPGLTG----VTAISAGESHTVAVRQDGTVWAWGDNV 285
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
+GQLG G +PV+V V IA G RH+ + +D V+ +G GQL
Sbjct: 286 WGQLGDGTRTDRLTPVQVPGL--SGVTAIAEGRRHTFAVRQD---GTVWAWGLNFWGQLG 340
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
G DR+ V +P +T + I+A + A+ +G ++ WG G +
Sbjct: 341 DGTRSDRLTPVQVPDLT------SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTY 394
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+D P +P + A G +H + + DG V G + G L D P+ V
Sbjct: 395 TDRLTPVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVP 454
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D V IAAG H+ V ++ + WG+ +GQLG G + P +V
Sbjct: 455 -------DLTSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSPSPVMV 503
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 159/352 (45%), Gaps = 32/352 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G D L+P + + L+SV+ +A G H LA+ G V+
Sbjct: 327 TVWAWGLNFWGQLGDGTRSDRLTP--VQVPDLTSVTAIAAGDYHTLAVRQD-----GTVW 379
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G D L P V G +T I+AG +H+ + G ++ GD
Sbjct: 380 AWGDNVWGQLGDGTYTDRLTPVQVPGLTG----VTAIAAGESHTVAMRQDGTVWAWGDNV 435
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G Y +PV+V +V IA G H+L + +D V +G GQLG
Sbjct: 436 WGQLGDGTYTDRLTPVQVPDL--TSVTAIAAGDYHTLAVRQD---GTVCAWGFNAYGQLG 490
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWG------RGFNSTS 267
RS S P + GL + + A GD + A+ +G ++ WG G +T
Sbjct: 491 DGTSS-RSPS-PVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATI 548
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
D P +P + A G H L DG V G + +G L D P+
Sbjct: 549 DRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPV---- 604
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV +AAG HS + ++ + WG GQLG G T ++ P
Sbjct: 605 -QVPGLTGVSA--MAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTP 653
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 157/354 (44%), Gaps = 39/354 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G D +P + L L+ V+ +A G H A+ G V+
Sbjct: 127 TVWAWGDNDWGQLGDGTRADRHTP--VQLPELTGVTAIAAGRRHTFAVRQD-----GTVW 179
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G + L P V G +T I+AG H+ V G ++ G+
Sbjct: 180 AWGDNAWGQLGDGTRTNRLTPVQVPGLTG----VTAIAAGDYHTLAVRQDGTVWAWGNNA 235
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
GQLG G Y +PV+V V I+ G H++ + +D V+ +G GQL
Sbjct: 236 LGQLGDGTYTERLTPVQVPGL--TGVTAISAGESHTVAVRQD---GTVWAWGDNVWGQLG 290
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGRGF------NS 265
G DR+ V +P GL + + A G R + A+ +G ++ WG F +
Sbjct: 291 DGTRTDRLTPVQVP----GLSGVTAI---AEGRRHTFAVRQDGTVWAWGLNFWGQLGDGT 343
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
SD P +P S + A G H L + DG V G + G L D P+
Sbjct: 344 RSDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPV-- 401
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV IAAG H+ + ++ + WG GQLG G D++ P
Sbjct: 402 ---QVPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTP 450
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 154/353 (43%), Gaps = 37/353 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G + +P + + L+ V+ +A G H A++ G V+
Sbjct: 77 TVWAWGLNVWGQLGDGTHTERHTP--VQVPGLTGVTAIAAGRRHTFAVSQD-----GTVW 129
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G D P + G +T I+AG H+ V G ++ GD
Sbjct: 130 AWGDNDWGQLGDGTRADRHTPVQLPELTG----VTAIAAGRRHTFAVRQDGTVWAWGDNA 185
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
+GQLG G + +PV+V V IA G H+L + +D V+ +G+ GQL
Sbjct: 186 WGQLGDGTRTNRLTPVQVPGL--TGVTAIAAGDYHTLAVRQD---GTVWAWGNNALGQLG 240
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
G +R+ V +P +T + ISA + A+ +G ++ WG G +
Sbjct: 241 DGTYTERLTPVQVPGLT------GVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTR 294
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+D P +P + A G H + DG V G + G L D R P+ V
Sbjct: 295 TDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVP 354
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
D V IAAG H+ V ++ + WG GQLG G D++ P
Sbjct: 355 -------DLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTP 400
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 37/351 (10%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W+WG GQLG G D L+P + + L+ V+ +A G H A+ G V++W
Sbjct: 29 WAWGNNAWGQLGDGTRTDRLTP--VQVPGLTGVTAVAAGRHHTFAVRQD-----GTVWAW 81
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLG G + P V G +T I+AG H+ VS G ++ GD +G
Sbjct: 82 GLNVWGQLGDGTHTERHTPVQVPGLTG----VTAIAAGRRHTFAVSQDGTVWAWGDNDWG 137
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--G 214
QLG G +PV++ V IA G RH+ + +D V+ +G GQL G
Sbjct: 138 QLGDGTRADRHTPVQLPEL--TGVTAIAAGRRHTFAVRQD---GTVWAWGDNAWGQLGDG 192
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+R+ V +P +T + I+A + A+ +G ++ WG G + ++
Sbjct: 193 TRTNRLTPVQVPGLT------GVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTE 246
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P +P + + G +H + + DG V G + G L D R P+
Sbjct: 247 RLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPV----- 301
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV IA G H+ V ++ + WG GQLG G D++ P
Sbjct: 302 QVPGLSGVTA--IAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTP 350
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 166/403 (41%), Gaps = 78/403 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT----------- 83
VW+WG GQLG G D L+P + + L+SV+ +A G H LA+
Sbjct: 427 TVWAWGDNVWGQLGDGTYTDRLTP--VQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484
Query: 84 ------------SPSSVI-------------------------GGKVFSWGRGSSGQLGH 106
SPS V+ G V++WG +SGQLG
Sbjct: 485 AYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGD 544
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G +D P + G +T I+AG H+ G +++ G ++GQLG G
Sbjct: 545 GATIDRRIPVQIPGLAG----VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHR 600
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
SPV+V V +A G HS+ LL+D V +G GQLG D + L
Sbjct: 601 LSPVQVPGL--TGVSAMAAGDAHSVALLQD---GTVSAWGRNSWGQLG---DGTTAARLT 652
Query: 227 QVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL 279
V + H + + ++A + AL +G ++ WG G +T+ P +
Sbjct: 653 PVQV--HGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLT 710
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ A G+ H + + DG V G + G L D + + P+ +V L GV +
Sbjct: 711 DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV-----QVQELTGVSAL 765
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
AAG H+ V ++ + WG QLG G++ D+ P V
Sbjct: 766 --AAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWV 806
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 141/327 (43%), Gaps = 35/327 (10%)
Query: 61 LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF 120
+ + L+ V+ G H +A+ G ++WG + GQLG G D L P V
Sbjct: 1 MQVPGLTGVTATTAGEYHTVAVRQD-----GTAWAWGNNAWGQLGDGTRTDRLTPVQVPG 55
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
G +T ++AG +H+ V G ++ G +GQLG G + +PV+V V
Sbjct: 56 LTG----VTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGL--TGV 109
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIV 238
IA G RH+ + +D V+ +G GQL G DR V LP++T +
Sbjct: 110 TAIAAGRRHTFAVSQD---GTVWAWGDNDWGQLGDGTRADRHTPVQLPELT------GVT 160
Query: 239 GISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
I+A + A+ +G ++ WG G + ++ P +P + A G H L
Sbjct: 161 AIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAIAAGDYHTL 220
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ DG V G + G L D P+ +V L GV I+AG H+ V
Sbjct: 221 AVRQDGTVWAWGNNALGQLGDGTYTERLTPV-----QVPGLTGVTA--ISAGESHTVAVR 273
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHP 379
++ + WG GQLG G D++ P
Sbjct: 274 QDGTVWAWGDNVWGQLGDGTRTDRLTP 300
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 37/353 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G D P + + L+ V+ +A G AH LA G V+
Sbjct: 530 TVWAWGLNASGQLGDGATIDRRIP--VQIPGLAGVTAIAAGSAHTLAAGQD-----GAVW 582
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG S GQLG G L P V G ++ ++AG HS + G + G +
Sbjct: 583 SWGANSYGQLGDGTTTHRLSPVQVPGLTG----VSAMAAGDAHSVALLQDGTVSAWGRNS 638
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + +PV+V V +A G H++ L +D V+ +G GQLG
Sbjct: 639 WGQLGDGTTAARLTPVQVHGL--TGVTAVAAGSLHTVALRQD---GTVWAWGYNDLGQLG 693
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ R+ V + +T ++ I+A + A+ +G ++ WG G S+
Sbjct: 694 DGTTTRRLAPVQVQGLT------DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSS 747
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ + P + S A G+ H + + DG V G + L + P+
Sbjct: 748 TARSTPVQVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPV--- 804
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V L GV + AG H+A V+ WG GQ+G G T D+ P
Sbjct: 805 --WVEGLTGVSAL--TAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRP 853
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 160/397 (40%), Gaps = 72/397 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G D L+P + + L+ V+ +A G +H +A+ G V+
Sbjct: 377 TVWAWGDNVWGQLGDGTYTDRLTP--VQVPGLTGVTAIAAGESHTVAMRQD-----GTVW 429
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G D L P V ++T I+AG H+ V G + G
Sbjct: 430 AWGDNVWGQLGDGTYTDRLTPVQVPDL----TSVTAIAAGDYHTLAVRQDGTVCAWGFNA 485
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQ-IACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G SPV V V +A G H++ +++D V+ +G GQL
Sbjct: 486 YGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQD---GTVWAWGLNASGQL 542
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
G + DR V +P + + I+A + A +G +++WG G +
Sbjct: 543 GDGATIDRRIPVQIPGLA------GVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGT 596
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-- 323
T+ P +P S A G H + L DG V G + G L D + P+
Sbjct: 597 TTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQV 656
Query: 324 ---------------SVALEKVSNL------------DGV--------------KVIQIA 342
+VAL + + DG V IA
Sbjct: 657 HGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTDVTAIA 716
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
AG H+ V ++ + WG+ GQLG G++ + P
Sbjct: 717 AGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTP 753
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G +P + + L+ VS LA G AH +A+ G V+
Sbjct: 730 TVWAWGYNLWGQLGDGSSTARSTP--VQVQELTGVSALAAGYAHTVAVKQD-----GTVW 782
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S QLG+G D P V G ++ ++AG H+ VS G + G
Sbjct: 783 AWGNNSGTQLGNGSSTDRYTPVWVEGLTG----VSALTAGRFHTAAVSPEGFGWAWGRNN 838
Query: 155 FGQLGHGDYRSHSSPVKV 172
FGQ+G G PV V
Sbjct: 839 FGQVGDGTTADRPRPVDV 856
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 4 PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
P+ + G SAL + +++ VW+WG + QLG G D +P + +
Sbjct: 753 PVQVQELTGVSALAAGYAHTVAVKQDG----TVWAWGNNSGTQLGNGSSTDRYTP--VWV 806
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
L+ VS L G H A+ SP G ++WGR + GQ+G G D P+PV
Sbjct: 807 EGLTGVSALTAGRFHTAAV-SPE----GFGWAWGRNNFGQVGDGTTAD--RPRPV 854
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 131 bits (329), Expect = 8e-28, Method: Composition-based stats.
Identities = 106/319 (33%), Positives = 149/319 (46%), Gaps = 27/319 (8%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
G G+ G+LG G + LNL ++ +S +H LALT G V+SWG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTK-----NGVVYSWG 447
Query: 98 RGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G G+LGHG + PK + F IT ISAG HS ++ G L+T G+G G
Sbjct: 448 DGEFGKLGHGNVATQKLPKVIRGVFKNQ--IITFISAGSRHSAAITKDGDLYTWGEGEHG 505
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LGHGD P V S Q+A G H++VL KD + V+ FG+G G+LG
Sbjct: 506 RLGHGDSSIQRVPTLVRSI--DAASQVAAGCSHTVVLSKDEM--TVWTFGAGDNGKLGHG 561
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSDVNCP 272
++ P++ L I I I+A S AL+ G +Y WG G + V+
Sbjct: 562 NTKMEY--YPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHLL 619
Query: 273 QSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ SL +LG H L L+ D EV G ++ G + P+S+ K
Sbjct: 620 PKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCFT---PVSLP-TK 675
Query: 330 VSNLDGVKVIQIAAGAEHS 348
V LDG+K+ QI+ G HS
Sbjct: 676 VLALDGIKIEQISTGTSHS 694
Score = 111 bits (277), Expect = 8e-22, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 148/316 (46%), Gaps = 33/316 (10%)
Query: 82 LTSP--SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
L SP SS + + ++WG SS QL G L PK F + AG +
Sbjct: 326 LGSPNDSSSLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFK----NAIQLEAGQYCTF 381
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKD 196
+ D G L CG G+ G+LG GD S K++ F N+N+ QI+ H+L L K+
Sbjct: 382 ALFDDGSLHACGKGSHGKLGLGDSSSKQCLHKLNLF-NQNIDQISSSKGSDSHTLALTKN 440
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH 255
+ VY +G G+ G+LG + + LP+V G+ +I+ ISA SAA++ +G
Sbjct: 441 GV---VYSWGDGEFGKLG--HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGD 495
Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG-EVLMLGGSHH 308
LYTWG G +S P + S + SQ A G +H +VL+ D V G +
Sbjct: 496 LYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDN 555
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L P + V L G+++ +IAAG + S +T I WG G L
Sbjct: 556 GKLGHGNTKMEYYP-----KIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGP--CL 608
Query: 369 GLGNTCDQIH--PKVV 382
G+G D +H PK+V
Sbjct: 609 GVG-AADAVHLLPKIV 623
Score = 72.8 bits (177), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 36/266 (13%)
Query: 137 HSGFVSDSGCL----FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
H G +DS L + G + QL G+ +P K +F KN Q+ G +
Sbjct: 325 HLGSPNDSSSLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAF--KNAIQLEAGQYCTFA 382
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALS 251
L D ++ G G G+LG+ D L ++ + +I+ + S D + AL+
Sbjct: 383 LFDD---GSLHACGKGSHGKLGLG-DSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALT 438
Query: 252 AEGHLYTWGRG-FNSTSDVN-CPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLM 302
G +Y+WG G F N Q LP + + + G H +T DG++
Sbjct: 439 KNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYT 498
Query: 303 LGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR-AI 357
G HG L S +RV + V ++D Q+AAG H+ V++++ +
Sbjct: 499 WGEGEHGRLGHGDSSIQRVPTL---------VRSIDAAS--QVAAGCSHTVVLSKDEMTV 547
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVN 383
T+G G++G+LG GNT + +PK+V+
Sbjct: 548 WTFGAGDNGKLGHGNTKMEYYPKIVD 573
>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Sarcophilus harrisii]
Length = 612
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 183/410 (44%), Gaps = 41/410 (10%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVI 89
+ V + SWGA + GQLG G D L PQ LN + +L GG H +T
Sbjct: 186 RAVTLLLSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTD----- 240
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G++F G GQLG G D L P T G + +S GW+ + ++++G + +
Sbjct: 241 EGELFVCGLNKDGQLGLGHTEDVLSFIPCTPLAG--CPVLQVSCGWDFTILLTENGQVLS 298
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG--- 206
CG +FGQLG +V +N+ V IA GMRH+L + L Q +G G
Sbjct: 299 CGSNSFGQLGLPPGTKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQ-WGTGLAS 357
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
+G+R + + P GL + ++ + A SA+L+ EG LY WG
Sbjct: 358 TGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQ 417
Query: 263 -FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP--- 314
+ + + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 418 LLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADYGQLGTKVDG 477
Query: 315 -ER--------VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
ER +S TR L+ + L+G V ++A G+EH+ V + +WGW EH
Sbjct: 478 QERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEHNLAVV-GSSCYSWGWNEH 534
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR-HCLPS 414
G G G + PK V E + L V CG+G + A+ + LPS
Sbjct: 535 GMCGDGTEVNVWVPKPV----ESPSLALCLLVGCGAGHSLAVGQAPALPS 580
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 180/387 (46%), Gaps = 73/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG + G+LG G D + P+L+ + +SV +ACG H A+T + G++F
Sbjct: 300 EIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVT-----MAGELF 354
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK ++ +G + ++ G H+ V+ + LFT G
Sbjct: 355 TWGDGTHNAGLLGHGTDVSHWIPKRISGPLEG--LQVASVTCGPWHTALVTTTRQLFTFG 412
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD + + P +V S +ACG+ H+ +
Sbjct: 413 DGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAV------------------ 454
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------ 265
+E++ +S+A + G L+TWG G +
Sbjct: 455 -----------------------VEVIVT-----QSSASVSSGKLFTWGDGDKNRLGHGD 486
Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
P +P+ +F + A G + + LT G+V +G + +G L +P+ S L
Sbjct: 487 KEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQ---SDGKL 543
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+E L G V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 544 PCFVE--DKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLV- 600
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS +T AI H
Sbjct: 601 --ETLKDRHVKY-IACGSNYTAAICLH 624
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 84/318 (26%)
Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
D L PKP+ D H HI+ G H+ V+ G +FT G+ + G+LGHG R
Sbjct: 266 ADLLLPKPLESNVVLDVH-----HIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDV 320
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
P V S +V +ACG H+ + + +++ +G G G LG D VS
Sbjct: 321 IQPRLVESLAFTSVDFVACGEFHTCAVT---MAGELFTWGDGTHNAGLLGHGTD----VS 373
Query: 225 --LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF 281
+P+ G L +++ ++ +A ++ L+T+
Sbjct: 374 HWIPKRISGPLEGLQVASVTCGPWHTALVTTTRQLFTF---------------------- 411
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
GDG +LG HG D + V+ R +V +L G++ I +
Sbjct: 412 --------------GDGTFGVLG---HG---DKDNVAYPR-------EVESLSGLRTIAV 444
Query: 342 AAGAEHSA-----VVTENRA------IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
A G H+A +VT++ A + TWG G+ +LG G+ ++ P V E+
Sbjct: 445 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNF 504
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ +V CG T ++
Sbjct: 505 Q----KVACGHSLTVGLT 518
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 166/364 (45%), Gaps = 31/364 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ + GQLG G + DE L+P + + ++V +ACG H L LT+ GK
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA-----TGK 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFF---DGHRYTITHISAGWNHSGFVSDSGCLFT 149
V++ G QLGH + P+ F + Y I I G HS +SD G + +
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLS 118
Query: 150 CGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
GD GQLGH D P V V K V QIACG HSL L C ++Y +GS
Sbjct: 119 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLA-LTSC--GELYSWGSN 175
Query: 209 KRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
GQLGV S + + + P L I + I+ G+ S +S G ++ WGR
Sbjct: 176 IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQL 235
Query: 262 GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G N ++ + P L + +L A G + LT +G V G +G L +
Sbjct: 236 GLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNE 295
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIH 378
P V L G + Q+A G H+ + +R + +G G GQLG +T +
Sbjct: 296 MLP-----RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLML 350
Query: 379 PKVV 382
P+VV
Sbjct: 351 PQVV 354
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 23/307 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P + ++ G H+ F++ +G ++
Sbjct: 4 GKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYA 63
Query: 150 CGDGTFGQLGHG--DYRSHSSP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
CG + QLGH R SP + + + + QI CG RHSL L QV +G
Sbjct: 64 CGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSD---WGQVLSWG 120
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
GQLG + D+ V LP+V L +V I+ + S AL++ G LY+WG
Sbjct: 121 DNDCGQLGHATDK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 179
Query: 262 -GFNSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
G NS +D+ N P L + L AA+ G NH +++ G V G ++ G L +
Sbjct: 180 LGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLND 239
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ + P ++ L + V +A G E S +T + T G G +GQLG G + +
Sbjct: 240 ETNRSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSN 294
Query: 376 QIHPKVV 382
++ P++V
Sbjct: 295 EMLPRMV 301
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG +D L L++L + + +ACGG H ++ G
Sbjct: 168 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK-----SG 222
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WGR + GQLG + + YP + + ++ G S F+++ G +FTCG
Sbjct: 223 AVFGWGRNNCGQLGLNDETNRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 280
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VY FG G G
Sbjct: 281 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYAFGLGSSG 338
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S+ LPQV IG
Sbjct: 339 QLGTRS--TKSLMLPQVVIG 356
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G + GQLG G +P ++ + V Q+ACG RH+L L +VY
Sbjct: 7 LYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA---TGKVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
GS QLG R P + I L D I+ I S ALS G + +WG
Sbjct: 64 CGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG--- 120
Query: 264 NSTSDVNCPQ----------SLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSH 307
D +C Q LP + + Q A G NH L LT GE+ G +
Sbjct: 121 ----DNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 176
Query: 308 HGML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+G L S + PL +++ L G+ + IA G HS +++++ A+ WG
Sbjct: 177 YGQLGVNSPNDLTHCNYPL-----RLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 231
Query: 365 HGQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + ++ +P + V GDEF
Sbjct: 232 CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEF 266
>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
plexippus]
Length = 733
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 167/347 (48%), Gaps = 38/347 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVI--GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
+ ++CG H S+VI G+VF +G + GQLG G + P V F HR
Sbjct: 57 IVAISCGDEH-------SAVICEKGRVFVFGANAWGQLGLGHKDEVTRPSCVKFLKPHRA 109
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T ++ G H+ FV+D+ +++ G GQLG GD HS P V V V Q++ G
Sbjct: 110 TF--VACGRAHTVFVTDTNAIYSVGCNDEGQLGSGDLEHHSVPQYVDLEVT--VKQVSAG 165
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD- 245
H+ +L +D +V+ GS GQLG+ +DR ++S ++ +E + G
Sbjct: 166 SNHTALLTED---GRVFVCGSNSEGQLGLGEDRRSALSFTELKF----MESIAFVECGYY 218
Query: 246 RSAALSAEGHLYTWGRGFN-------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD- 297
+ ++A+G ++ G N ++S + PQ LP + A G NH +L+ D
Sbjct: 219 HTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQVLPLDVHIKSACCGANHTFLLSMDE 278
Query: 298 GEVLMLGGSHHGMLSDP-ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
++L G + G L P E V+ T P + +EK+ DG ++ +A GA H+A VT+N
Sbjct: 279 SKILAFGSNEKGQLGMPKEVVNVTLPTEIDMEKM--FDGYQLKLVACGAMHTAFVTDNGL 336
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
+ T G H +L L T D + ++ N+ T + V +GF
Sbjct: 337 LYTCGEARHNKLCLEETDDNTN------SNDLPNQYTPMRVTAMNGF 377
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH-GEMVDALYPK 116
PQ+L L + CG H L+ S K+ ++G GQLG E+V+ P
Sbjct: 252 PQVLPLDV--HIKSACCGANHTFLLSMDES----KILAFGSNEKGQLGMPKEVVNVTLPT 305
Query: 117 PV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL---------GHGDYR 164
+ FDG Y + ++ G H+ FV+D+G L+TCG+ +L D
Sbjct: 306 EIDMEKMFDG--YQLKLVACGAMHTAFVTDNGLLYTCGEARHNKLCLEETDDNTNSNDLP 363
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLV 192
+ +P++V++ + +ACG H+L+
Sbjct: 364 NQYTPMRVTAMNGFVIDNVACGGCHTLL 391
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 179/385 (46%), Gaps = 44/385 (11%)
Query: 49 TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
+G D L P+ L + V ++CGG H +T G+V+SWG S G+LGHG
Sbjct: 293 SGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVTK-----QGEVYSWGEESGGRLGHG- 346
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSH 166
VD P+P I ++ G H+ V+ SG L+T G+GTF G LGHG+ SH
Sbjct: 347 -VDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSH 405
Query: 167 SSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +++ + +V I+CG H+ V+ Q++ FG G G LG DR +S+S+
Sbjct: 406 WMPKRLNGPLEGIHVSSISCGPWHTAVVTS---AGQLFTFGDGSFGVLG-HGDR-QSLSV 460
Query: 226 PQVTIGLHDIEIVGISAN------------GDRSAALSAEGHLYTWGRGFNST-----SD 268
P+ L + V + G+ S + + G ++TWG G D
Sbjct: 461 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKD 520
Query: 269 VNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ +SL +F Q A G + LT G V +G S +G L +P+ P V
Sbjct: 521 TRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ-ADGMVPARV 579
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+ N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 580 EGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEAL 635
Query: 386 DEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 636 KDKQVR----SVVCGINFTAAICIH 656
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 29/297 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G+LG G D P+L+ + ++ ++ACG H A+T + G ++
Sbjct: 331 EVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVT-----LSGDLY 385
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK + +G ++ IS G H+ V+ +G LFT G
Sbjct: 386 TWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 443
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 444 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKI 503
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG R V P L + ++ + AL+ GH+YT G
Sbjct: 504 FTWGDGDKGRLGHGDKDTRLV--PTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSS 561
Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
N +D P + L + + G HV VLT EV G +G L
Sbjct: 562 VYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRL 618
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G L P + + +ACG +ALT+ G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTT-----SGHVY 556
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D + P V +G H+ + IS G H ++ ++T G
Sbjct: 557 TMGSSVYGQLGNPQ-ADGMVPARV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G G+LGHGD +SP V + +K V + CG+ + +
Sbjct: 613 GANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAI 653
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 165/377 (43%), Gaps = 34/377 (9%)
Query: 21 KPKIEEEEEEQQVVK-VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHV 79
P + + + V +WG DG+LG G D +P ++L + ++++ +A G H
Sbjct: 58 SPTVAQNGPSRDASDTVLAWGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHS 117
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
LA+TS G +WG GQLG G D+ P V G T+T I+AG +HS
Sbjct: 118 LAVTS-----AGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAG--TTVTAIAAGDDHSL 170
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
V+ +G GD G+LG G +PV V V IA G+ HSL L
Sbjct: 171 AVTSAGTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTS---A 227
Query: 200 NQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
V +G GQLG +V LP T + I+A S A++ G
Sbjct: 228 GTVLTWGLNSDGQLGDGTTTDSSTPIAVDLPAGT------TVTAIAAGSLHSLAVTTAGT 281
Query: 256 LYTWGR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+ WG G +T++ + P + LP+S + + G +H L +T G L G +
Sbjct: 282 ILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDND 341
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G L D +S+ P++V L + V AG+ HS VT I+ WG G+
Sbjct: 342 DGQLGDGTTTNSSTPIAVNLPADT-----TVTATTAGSLHSLAVTTAGTILAWGNNSDGR 396
Query: 368 LGLGNTCDQIHPKVVNL 384
LG G T + P VNL
Sbjct: 397 LGDGTTTNSSTPIAVNL 413
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 167/388 (43%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG G G+LG D SP++++ + V +ACG H ALT G+V+
Sbjct: 324 EVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTD-----SGEVY 378
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG + L G P+ + DG +I+ ++ G H+ VS G LFT G
Sbjct: 379 TWGNDVCCADLLNEGRTRSQWIPQRLGGPLDG--ISISSVACGEWHTAIVSSCGRLFTYG 436
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD RS+SSP +V S V ACG H+ +++
Sbjct: 437 DGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVE---------------- 480
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------- 263
V DR R S A G L+TWG G
Sbjct: 481 ---VMFDRFRYNS---------------------------ASGKLFTWGDGDEGRLGHVD 510
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
N V + F Q + G + LT G+V +G + +G L +P R
Sbjct: 511 NGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPH----ARDK 566
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V +E + VKVI + G+ H AV+T ++ TWG GE GQLGLG+T D+ P V
Sbjct: 567 VVIVEGQLKQEFVKVI--STGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVE 624
Query: 384 LGDEFQNRDTQLE-VFCGSGFTYAISRH 410
RD Q+ + CG FT AI H
Sbjct: 625 -----ALRDRQVNTITCGPSFTAAICLH 647
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 333 EIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVT-----LSGDLY 387
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG + PK + +G ++ IS G H+ V+ +G LFT G
Sbjct: 388 TWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG--IHVSSISCGPFHTVIVTSAGQLFTFG 445
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD S S P +V S + ACG+ H+ +++ GN ++
Sbjct: 446 DGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 505
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ + L
Sbjct: 506 FTWGDGDKGRLG----------------------------HGDKESRLVP---------- 527
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + LT G V +G + +G L +P+ P
Sbjct: 528 -------TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGMLP 578
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + N V +I+ GA H AV+T + TWG G +G+LG GNT D+ P +V
Sbjct: 579 ARVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLV 634
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R+ V CG+ FT AI H
Sbjct: 635 EALKDKQVRN----VVCGTNFTAAICIH 658
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 126/314 (40%), Gaps = 75/314 (23%)
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
+D L PKP+ F R + +IS G H+ VS G +++ G+ + G+LGHG + P
Sbjct: 299 MDCLVPKPLEF--AVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHP 356
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVSLPQ 227
+ + + N+ +ACG H+ + L +Y +G G K G LG D S +P+
Sbjct: 357 KLIDALTHMNIELVACGEYHTCAVT---LSGDLYTWGDGTFKFGLLGHGND--ISHWVPK 411
Query: 228 VTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL 286
G L I + IS + +++ G L+T+
Sbjct: 412 KLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTF--------------------------- 444
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
GDG +LG LS P+ V S L G++ ++ A G
Sbjct: 445 ---------GDGSFGVLGHGDRESLSVPKEVES-------------LKGLRTVRAACGVW 482
Query: 347 HSAVVTENRA------------IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
H+A V E A I TWG G+ G+LG G+ ++ P V E
Sbjct: 483 HTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVE----PNF 538
Query: 395 LEVFCGSGFTYAIS 408
+V CG T A++
Sbjct: 539 CQVACGHCLTVALT 552
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 183/388 (47%), Gaps = 75/388 (19%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G+LG G P+LL S+ +V ++ACG H A+T+ G +
Sbjct: 281 AEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTA-----TGDL 335
Query: 94 FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ +G LGHG V PK V+ +G ++ +S G H+ ++ SG L+T
Sbjct: 336 YTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEG--LQVSTVSCGTWHTALITSSGQLYTF 393
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK------DCLGNQVYG 204
GDGTFG LGHG+ + S P +V S ++CG+ HS +++ + +++
Sbjct: 394 GDGTFGALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFT 453
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GDRSA L
Sbjct: 454 WGDGDKYRLG----------------------------HGDRSAKLK------------- 472
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P +PS +F ++A G + LT G + +G S +G L +P + R
Sbjct: 473 -------PTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPN--NDGRY 523
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +KV V+++A G+ H AV+T + TWG G +G+LG G+ D+ KV
Sbjct: 524 PRLVEDKVGG---GGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADR---KVP 577
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
L + ++R + + CGS FT AIS+H
Sbjct: 578 TLVEALRDRSVK-RIACGSSFTAAISQH 604
>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1043
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 187/398 (46%), Gaps = 43/398 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+ G DG + + D L+P+ L + + V + CG HV +T G+V
Sbjct: 218 EVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTR-----QGEV 272
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG G+LGHG VD PK V F I ++ G H+ VS SG LF+ GDG
Sbjct: 273 FTWGEEVGGRLGHGIQVDISRPKLVEFL--ALTNIDFVACGEYHTCVVSTSGDLFSWGDG 330
Query: 154 --TFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LGHG SH P +VS V +ACG HS + + +++ FG G
Sbjct: 331 IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATAN---GKLFTFGDGAF 387
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------SAEGHLYTWG 260
G LG SVS P+ L+ ++ V ++ + +AA+ + L+TWG
Sbjct: 388 GVLGHGNRE--SVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWG 445
Query: 261 RGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G + ++ LP+ +S F + A G + LT G V +GG+ HG L
Sbjct: 446 DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ +S + + ++ L G V +IA G H AV+T + TWG G +G+LG G+
Sbjct: 506 N--SISDGKLPCLVQDR---LVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGD 560
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
T D+ P V + ++R + + CGS FT +I H
Sbjct: 561 TEDKRTPTCV---EALRDRHVK-SLSCGSNFTSSICIH 594
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 157/354 (44%), Gaps = 27/354 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG G DGQLG G+ SP + + + V + CG + +A+ S G+++SWG
Sbjct: 33 SWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSR----GQIYSWG 88
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD-SGCLFTCGDGTFG 156
G G+LGHGE D P+P+ FF G + ++ G H+ V+ G L+T G G
Sbjct: 89 WGDFGRLGHGECGDVFVPRPIAFFSGR--PVARVACGDTHTLVVTQGDGALYTFGRNQNG 146
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
QLG G SP V++ + V +ACG HSL + V+ +G G+ G LG
Sbjct: 147 QLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE---AGTVFSWGWGRYGNLGDG 203
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFNSTSD 268
+ R P +GL + + + SA ++ EG ++T+ G G +
Sbjct: 204 DSQDRYT--PTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHT 261
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLS-- 324
C + S A GW H + +G + G + G L D E ++ P++
Sbjct: 262 RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGF 321
Query: 325 ---VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ +V +A G H+ VTE + +WG G +GQLG G D
Sbjct: 322 GLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 121/239 (50%), Gaps = 20/239 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G +GQLG G +D LSPQL+ VS +ACG H LA T G VFS
Sbjct: 137 LYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEA-----GTVFS 191
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G LG G+ D P V DG T+T + GW HS V+D G +FT G +
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDG--VTVTSVVCGWRHSAVVTDEGRVFTFGWSKY 249
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLGHGD+ H+ P V+ + V +A G RH++ D GN +Y +G K GQLG+
Sbjct: 250 GQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMA--ADSEGN-LYAWGWNKFGQLGL 306
Query: 216 SKDRIRSVSLPQVTIGLHDI---------EIVGISANGDR-SAALSAEGHLYTWGRGFN 264
R+ P GL V + A G R + A++ G +Y+WGRG N
Sbjct: 307 GDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVN 365
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 142/328 (43%), Gaps = 41/328 (12%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD--------- 122
++CG +H +AL G V SWGRG GQLGHG+ P +
Sbjct: 15 VSCGSSHSIALLDC-----GVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVC 69
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G YT+ S G +++ G G FG+LGHG+ P ++ F + V +
Sbjct: 70 GAEYTVA----------VASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVAR 119
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ACG H+LV+ + +Y FG + GQLG+ PQ+ L + ++
Sbjct: 120 VACGDTHTLVVTQG--DGALYTFGRNQNGQLGLGH--TNDCLSPQLVTALQGERVSSVAC 175
Query: 243 NGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVL 294
+ S A + G +++WG G + D P + ++ + GW H V+
Sbjct: 176 GSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVV 235
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +G V G S +G L + V TRP VA L +V +A G H+
Sbjct: 236 TDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVA-----GLQHCRVSTVAGGWRHTMAADSE 290
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ WGW + GQLGLG++ D+ P V
Sbjct: 291 GNLYAWGWNKFGQLGLGDSEDRAAPTPV 318
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 38/325 (11%)
Query: 9 TEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS 68
T+ G A++ A+ + Q+ +SWG G G+LG G D P+ + S
Sbjct: 60 TDAGVDAVVCGAEYTVAVASSRGQI---YSWGWGDFGRLGHGECGDVFVPRPIAFFSGRP 116
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V+ +ACG H L +T G ++++GR +GQLG G D L P+ VT G R +
Sbjct: 117 VARVACGDTHTLVVTQGD----GALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGER--V 170
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
+ ++ G HS +++G +F+ G G +G LG GD + +P +V V + CG R
Sbjct: 171 SSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWR 230
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS V+ + +V+ FG K GQLG D R P + GL + ++
Sbjct: 231 HSAVVTDE---GRVFTFGWSKYGQLGHGDHVDHTR----PCLVAGLQHCRVSTVAGGWRH 283
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--------------SSLSFSQAAL 286
+ A +EG+LY WG G + D P + + + A
Sbjct: 284 TMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLAC 343
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGML 311
GW H + +T GEV G +G L
Sbjct: 344 GWRHTVAVTEAGEVYSWGRGVNGQL 368
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQA 284
+ ++G+S S AL G + +WGRG + + C +L + +
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVV 68
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
V V + G++ G G L E P +A G V ++A G
Sbjct: 69 CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAF-----FSGRPVARVACG 123
Query: 345 AEHSAVVTE-NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
H+ VVT+ + A+ T+G ++GQLGLG+T D + P++V
Sbjct: 124 DTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVT 163
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 35/341 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-MLACGGA--HVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ P+ L L ++ + + G+ H LA+T + G+
Sbjct: 390 VKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAIT-----VDGE 444
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
VFSWG G G+LGHG YPK V G ++ + SAG+ HS V++ G L+T
Sbjct: 445 VFSWGDGEYGKLGHGNSATQKYPKIV---QGPLFSKIVVSASAGYRHSAAVTNDGELYTW 501
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+G FG+LGH D +S ++P V V Q+ACG H++ + +D G ++ FG G
Sbjct: 502 GEGDFGRLGHSDSQSRNTPTLVKDI--SGVGQVACGSSHTIAVAQD--GRTMWSFGGGDN 557
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNST 266
G+LG V P+V LH I + A S AL++ G ++ WG G S+
Sbjct: 558 GKLG--HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 615
Query: 267 SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRP 322
+ LS ++ + G +H L L+ + EV G + G + TRP
Sbjct: 616 ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRP 675
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV L+GV + QI AG HS V +R ++ W
Sbjct: 676 -----KKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 711
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 163/368 (44%), Gaps = 39/368 (10%)
Query: 19 NAKPKIEEEEEEQQVVKVWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACG 75
NA+P E+ +E V+ WG G GQL GT L+P LS + CG
Sbjct: 3669 NARP---EDWQEGGKSDVYLWGNGRYGQLAGTGTNLTLPTLAP------CLSQTQQVVCG 3719
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
+ S G V + G G G+LG G D P ++ F G+ T S G
Sbjct: 3720 QNCSFLIQS-----NGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774
Query: 136 N-HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+ HS ++++G +F+ GDG FG+LGHG+ P ++ + ++V Q+ACG RHS V+
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVT 3834
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
D +++ FGSG+ G+LG + + P+ L + +S + + LS +G
Sbjct: 3835 AD---GKLFTFGSGESGRLG--QRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDG 3889
Query: 255 HLYTWG--------RGFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLG 304
+ W G S++ PQ + + + G +VL DG V G
Sbjct: 3890 -MAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG 3948
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
L D + + P + V +L+G+ + IA G EH ++ I WG
Sbjct: 3949 QERLIGLPDSMLKNRSNP-----QVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNS 4003
Query: 365 HGQLGLGN 372
GQLGLG+
Sbjct: 4004 EGQLGLGH 4011
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 44/368 (11%)
Query: 56 LSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
L ++ NL+S SS + AC G A+T V+ WG SS QL G +
Sbjct: 309 LFEEICNLASYCLCSSSADTACPGTDGDAVT---------VYVWGSNSSHQLAEGTLEKI 359
Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
L PK F + I AG + VS G + CG G++G+LG GD + S P K+
Sbjct: 360 LLPKLTQGFSDAQT----IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKL 415
Query: 173 SSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
++N+ ++ H+L + D +V+ +G G+ G+LG + P++
Sbjct: 416 VLEPHRNIKKVFSSKGSDGHTLAITVD---GEVFSWGDGEYGKLGHGNSATQKY--PKIV 470
Query: 230 IG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
G L +V SA SAA++ +G LYTWG G + + N P +
Sbjct: 471 QGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG 530
Query: 283 QAALGWNHVLVLTGDGEVLM-LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
Q A G +H + + DG + GG +G L + RP + + L G + ++
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRP-----KVIEALHGFIIRKV 585
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVVNLGDEFQNRDTQLEVFCG 400
AG++ S +T + WG G LG G++ + P+ V E + +++ CG
Sbjct: 586 CAGSQSSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPRFV----EDLSITKIIDISCG 639
Query: 401 SGFTYAIS 408
A+S
Sbjct: 640 DSHCLALS 647
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++ G+G +GQL G + + P Q+ CG S ++ + V G
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCL--SQTQQVVCGQNCSFLIQSN---GAVMAVG 3736
Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
G+ G+LG + D + ++ G ++V + S AL+ G +++WG G F
Sbjct: 3737 EGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3796
Query: 265 STSDVNCP-QSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
N Q P + Q A G+ H V+T DG++ G G L
Sbjct: 3797 KLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTS 3856
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT-ENRAIMTWGWGEHGQLGLGNTCDQ 376
+ +P E+V+ L+G V Q++ G H+ V++ + A+ +G G++G+LG G++ +
Sbjct: 3857 NKMQP-----ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAK 3911
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+P+ V ++ N+ + +V CG+ F+ ++
Sbjct: 3912 YYPQKV---EQLCNKGMK-KVCCGAQFSVVLA 3939
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 80/206 (38%), Gaps = 54/206 (26%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++++G+G G+LG +++ P+ + V ++CG H L L S+ G V+
Sbjct: 3838 KLFTFGSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVL----SLDGMAVW 3893
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFF--------------------DGHRYT------- 127
++G G G+LG G YP+ V DGH YT
Sbjct: 3894 AFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLI 3953
Query: 128 -----------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
I I+ G H +S +G ++ G + GQLG G
Sbjct: 3954 GLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCN 4013
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHS 190
P +++ KN+ QI+ G HS
Sbjct: 4014 LVKEPTLITALQGKNIKQISAGRCHS 4039
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VY +GS QL ++ + + LP++T G D + I A + ++S +G + G+
Sbjct: 340 VYVWGSNSSHQL--AEGTLEKILLPKLTQGFSDAQT--IEAGQYCTFSVSTDGSVKACGK 395
Query: 262 GFNST---SDVNCPQSLPSSLSF-----------SQAALGWNHVLVLTGDGEVLMLGGSH 307
G D N QS+P L S+ + G H L +T DGEV G
Sbjct: 396 GSYGRLGLGDSN-NQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEVFSWGDGE 452
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+G L + P V S + V+ +AG HSA VT + + TWG G+ G+
Sbjct: 453 YGKLGHGNSATQKYPKIVQGPLFSKI----VVSASAGYRHSAAVTNDGELYTWGEGDFGR 508
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
LG ++ + P +V ++ +V CGS T A+++
Sbjct: 509 LGHSDSQSRNTPTLV------KDISGVGQVACGSSHTIAVAQ 544
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 164/378 (43%), Gaps = 73/378 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K+++ G GT+G+LG G ++ P+ + S + +A GG H LALT GK
Sbjct: 3014 KLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQ-----DGK 3068
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG + PK + R I I+ G HS ++ +G L+T G
Sbjct: 3069 VFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKR--IRDIACGSGHSAAIASNGELYTWGL 3126
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKD-CLGNQVYGFGSGK 209
G +G+LGHGD + + P V + V V Q+ACG R ++ L D C VY +G G
Sbjct: 3127 GEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGC----VYSWGDGD 3182
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
G+LG + P V L+ + +V + S AL+ G ++TWG+
Sbjct: 3183 FGKLG--RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGK-------- 3232
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
GD L G HH + P V R
Sbjct: 3233 --------------------------GDYFRLGHGNDHH--VRKPTLVEGLR-------- 3256
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEF 388
G K++ +A GA H VT+ + WG +HGQ G G T P +V+ L D
Sbjct: 3257 -----GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDAR 3311
Query: 389 QNRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3312 VNR-----VSCGSSHSIA 3324
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 145/326 (44%), Gaps = 29/326 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV+S G G G+LG G + P LL + +A GG H LAL+S G
Sbjct: 3996 KVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE-----GH 4050
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + Y +P D I I+ G +HS ++ +G L+T G
Sbjct: 4051 VYSWGEGDDGKLGHGNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD P V + + V +ACG +L + D + V+ +G G
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4165
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G+LG + +P L + ++ + S AL+ G +YTWG+ G
Sbjct: 4166 GKLG--RGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ V P+ + + A G H + + GEV G + G L D + RP
Sbjct: 4224 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRP 4283
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
V L G K+ ++A G+ H+
Sbjct: 4284 -----RLVHALQGKKITRVACGSAHT 4304
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G P+L+ ++ +ACG + AL+ + G++++
Sbjct: 530 VYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAALS-----VSGELYT 584
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG--FVSDSGCLFTCGDG 153
WGRG+ G+LGHG D + P VT GH T+ H++ G S V+ SG +F+ GDG
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGH--TVVHVACGSGDSQTLCVTASGIVFSWGDG 642
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G +L
Sbjct: 643 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAH---GEVYTWGKGDTYRL 699
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + V P++ L D +I +S L+ + +Y WGR
Sbjct: 700 GHGSE--EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGR 745
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 172/386 (44%), Gaps = 35/386 (9%)
Query: 36 VWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ WG GQLG +L +LS+L + LA G + A+T+ GKV+
Sbjct: 3945 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQ-LAGGEQTLFAVTA-----DGKVY 3998
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G G++G+LG G + P + +S+G H +S G +++ G+G
Sbjct: 3999 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGD 4058
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
G+LGHG+ S+ P + + + IACG HS + +Y +G G+ G+L
Sbjct: 4059 DGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITS---AGWLYTWGKGRYGRLG 4115
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTW--------GRG 262
G S D++R P+V L D +++ ++ +GD ++ ++ + ++++W GRG
Sbjct: 4116 HGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4171
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ V + L + G + LT G V G + L RP
Sbjct: 4172 GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRP 4231
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV+ L G K+I IA G+ H ++ + TWG + GQLG G T P++V
Sbjct: 4232 -----RKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4286
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ Q + V CGS T A S
Sbjct: 4287 H---ALQGKKIT-RVACGSAHTLAWS 4308
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R ++ G V+ G +++
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYST 4000
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + + ++A G +H L L + VY +G G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE---GHVYSWGEG 4057
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG +S DR P++ L +EI+ I+ G SAA+++ G LYTWG+
Sbjct: 4058 DDGKLGHGNKMSYDR------PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRY 4111
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 4112 GRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4171
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
PL K+ +L G+ VI++ G++ S +T + A+ TWG G++ +LG G
Sbjct: 4172 GSDGCKVPL-----KIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4226
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4227 HVRRPRKV 4234
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 37/311 (11%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ L C ++ L+ + G V++ GS Q YP+ V F T+
Sbjct: 467 IKQLCCTERALMILS-----LNGNVYNMYHGSETQ----------YPQRVHGFSDKLVTM 511
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
+ H ++ GC+++ G+G G+LGHGD S+ P + + + KN+ IACG
Sbjct: 512 IASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGST 571
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDR 246
+S L + ++Y +G G G+LG V +P + L H + V + +
Sbjct: 572 YSAAL---SVSGELYTWGRGNYGRLG--HGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQ 626
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDG 298
+ ++A G +++WG G T P+ + L + + G LT G
Sbjct: 627 TLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG 686
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTENRAI 357
EV G D R+ V K + +L K+ ++ GA H V+TE++ +
Sbjct: 687 EVYTWGK------GDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFV 740
Query: 358 MTWGWGEHGQL 368
WG ++GQ+
Sbjct: 741 YGWGRNDYGQI 751
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 12/216 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G D + P L+ +V +ACG L +S G VF
Sbjct: 581 ELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTAS---GIVF 637
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWG G G+LG G + PK V D + + G S ++ G ++T G G
Sbjct: 638 SWGDGDYGKLGRGGTDGSKTPKIVDKLLD---INVVKVFCGSQFSAALTAHGEVYTWGKG 694
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+LGHG P + S +K + ++ G H LVL +D VYG+G GQ+
Sbjct: 695 DTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQF---VYGWGRNDYGQI 751
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+ + +S P + L ++G+++ +S A
Sbjct: 752 DPTLGSV--ISEPTLCPTLSSKTVIGLASGPTQSFA 785
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 39/281 (13%)
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSG 208
+G + HG + P +V F +K V IA +H L L +D C VY +G+G
Sbjct: 483 NGNVYNMYHGSETQY--PQRVHGFSDKLVTMIASHSDGKHHLALTQDGC----VYSWGNG 536
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
G+LG VS D P++ L + IV I+ SAALS G LYTWGRG
Sbjct: 537 DGGRLGHGDTVSYDE------PKLIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNY 590
Query: 263 ----FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ DV P + + ++ G + L +T G V G +G L
Sbjct: 591 GRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG 650
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
S P + V L + V+++ G++ SA +T + + TWG G+ +LG G+
Sbjct: 651 GTDGSKTP-----KIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEE 705
Query: 375 DQIHPKVVNLGDEFQNRD-----TQLEVFCGSGFTYAISRH 410
+PK++ + + +D T + V F Y R+
Sbjct: 706 HVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRN 746
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 36/256 (14%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S+P + + Q+ C R ++L L VY G Q P
Sbjct: 454 STPFYCDAIAELGIKQLCCTERALMIL---SLNGNVYNMYHGSETQY------------P 498
Query: 227 QVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
Q G D + ++ ++G AL+ +G +Y+WG G T + P+ + +
Sbjct: 499 QRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEAL 558
Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
L + A G + L+ GE+ G ++G L P V+ L G
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIP-----TLVTTLKGH 613
Query: 337 KVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V+ +A G+ + VT + + +WG G++G+LG G T PK+V D+ + +
Sbjct: 614 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIV---DKLLDINV- 669
Query: 395 LEVFCGSGFTYAISRH 410
++VFCGS F+ A++ H
Sbjct: 670 VKVFCGSQFSAALTAH 685
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 184/402 (45%), Gaps = 28/402 (6%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
I E +Q+ +V+ WG G + L+PQ +++ S++ +ACGG H+L L+
Sbjct: 201 IASMELDQKCARVFLWGRPP----GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLS 256
Query: 84 SPSSVIGGKVFSWGRGS-SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
S V + + + L ++V L + HR I HI+ G HS ++
Sbjct: 257 SAGDVYSSEDHAISTTEPTNMLQTPQLVKELTLEKAL----HRRPIIHIACGAKHSVALT 312
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+G +++ G G G+LGHG+ R + P K+ + + + ++CG H+ V+ N V
Sbjct: 313 SAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQ---NLV 369
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
+ FG G+ G+LG+ + T G I+ + + + ALS EG +++WG+
Sbjct: 370 FTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQ 429
Query: 262 -------GFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
GF +++ P + L A G+ H L LT EVL G +G L
Sbjct: 430 SEGQCGLGFCDQDELS-PCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLG 488
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
V P S+ + + +G +I GA HS + ++ + WG +G GLG+
Sbjct: 489 R-GIVYQPSPESID-QSLFACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGH 546
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
T ++ P+ D F N DT + + CG +T A+ +PS
Sbjct: 547 TLNRDIPE---RNDFFANIDTDVVLCCGHKYTIALEVDKVPS 585
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 163/330 (49%), Gaps = 29/330 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QL--LNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
K+++ G GT+G+LG G ++ +P QL LN + V++ + GG H +ALT + G
Sbjct: 3038 KLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHS-GGKHAMALT-----LDG 3091
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH + PK + R I I+ G +HS +S +G LFT G
Sbjct: 3092 KVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKR--IRDIACGSSHSAAISSTGELFTWG 3149
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P V + + ++ Q+ACG R + L G V+ +G G G
Sbjct: 3150 LGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEG-LVFSWGDGDFG 3208
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
+LG + +P L+ + + I S AL+ G +YTWG+G S
Sbjct: 3209 KLG--RGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGS 3266
Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
V P +L SLS A+G H L T G+V G + HG + + + +P
Sbjct: 3267 DQHVRKP-TLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKP 3325
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V NL+GV+V ++A G+ HS T
Sbjct: 3326 -----SLVLNLEGVRVNRVACGSSHSIAWT 3350
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 10/226 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+SWG G DG+LG G + PQL++ + +ACGGAH A+T+ GG+++
Sbjct: 4075 KVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA-----GGEIY 4129
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D + PK V G + +G + ++D +++ GDG
Sbjct: 4130 TWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGD 4189
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 4190 YGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4246
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
D V P+ L +I+ I+ A S G ++TWG
Sbjct: 4247 HGSD--EHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWG 4290
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 23/281 (8%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H LAL+ G V+SWG G G+LGHG+ P +T G + HIS G
Sbjct: 530 GKHSLALSC-----DGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGK--NVIHISCGA 582
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+S V+ SG ++T G G +G+LGHG H+ P V + + IACG + L
Sbjct: 583 TYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTL-- 640
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+ N F G G + P++ L DIE+ + S AL+ G
Sbjct: 641 -AVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGS 699
Query: 256 LYTWGRGFN------STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+YTWG+G N S + V P+ + + + A+G HVL LT DGEV G +
Sbjct: 700 VYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRND 759
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+G + + + + P + L L G ++ I G S
Sbjct: 760 NGQVGETSETNVSEPTLLTL-----LQGKNIVDIDCGPNQS 795
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 129/292 (44%), Gaps = 27/292 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL++ GKV+SWG G G+LGHG +P+ + G I I+ G
Sbjct: 4063 GGKHCLALST-----DGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKE--IVDIACG 4115
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ G ++T G G +G+LGHGD P V + + V IACG +L
Sbjct: 4116 GAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLC 4175
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4176 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTR 4230
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4231 SGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWG 4290
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ G L D + RP V L G + ++A G+ HS + N++
Sbjct: 4291 DNDEGQLGDGTMNAIHRP-----RLVVTLQGKNINRVACGSAHSLAWSTNKS 4337
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 166/384 (43%), Gaps = 33/384 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV+ WG QLG + P +L++L + + GG+ L + S GK+
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHI--AGGSKSLFIVS----YDGKL 3039
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G++G+LG G + P +T + + + +G H+ ++ G +F+ G+G
Sbjct: 3040 YACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG 3099
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGH + S P + + +K + IACG HS + +++ +G G+ G+L
Sbjct: 3100 EDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISS---TGELFTWGLGEYGRL 3156
Query: 214 GVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTW--------GRGF 263
G D + + P++ L H I V + ++ ALSAEG +++W GRG
Sbjct: 3157 G-HGDNLTQLR-PKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGG 3214
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ D+ + L G L LT G+V G + L +P
Sbjct: 3215 SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKP- 3273
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VV 382
V +L K++ +A GA H T+ + WG +HGQ G G P V+
Sbjct: 3274 ----TLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVL 3329
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYA 406
NL NR V CGS + A
Sbjct: 3330 NLEGVRVNR-----VACGSSHSIA 3348
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 169/391 (43%), Gaps = 53/391 (13%)
Query: 32 QVVKVWSWGAGTDG-QLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q V W W + + LGT SPQ + V + C +L LT +
Sbjct: 448 QEVMAWGWLSWSSCHDLGT-------SPQSCDSIRELGVKQIVCAERWLLILT-----LT 495
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKV+ S Q P+ + FDG + A HS +S G +++
Sbjct: 496 GKVYIMYYSSETQC----------PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSW 545
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+G G+LGHGD S P K++ V KNV I+CG +S + +VY +G G
Sbjct: 546 GNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTS---SGEVYTWGRGNY 602
Query: 211 GQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG-----R 261
G+L G S+D ++P + +GL D IV I+ +GD ++ A++ G +++WG +
Sbjct: 603 GRLGHGTSEDH----TVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGK 658
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAA---LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
SD + L L + A G L LT G V G D R+
Sbjct: 659 LGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGK------GDNHRLG 712
Query: 319 STRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
V K V L+G + ++A G+ H +T++ + WG ++GQ+G + +
Sbjct: 713 HGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVS 772
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P ++ L Q ++ +++ CG + A S
Sbjct: 773 EPTLLTL---LQGKNI-VDIDCGPNQSIAWS 799
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
VWSWG G G+LG G P + + SL+ V + CG +ALT G V
Sbjct: 4182 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVVKVECGSQFSVALTR-----SGSV 4234
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG+G +LGHG +PK + G + I I+ G H SD G +FT GD
Sbjct: 4235 YTWGKGDYHRLGHGSDEHVRHPKKIAALQGKK--IICIATGSLHCVACSDLGEVFTWGDN 4292
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V + KN++++ACG HSL
Sbjct: 4293 DEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSL 4330
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 173/386 (44%), Gaps = 35/386 (9%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ WG GQLG ++ LS+L V ++ G +LA+TS GKV+
Sbjct: 3970 IYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVG-GEQTLLAVTS-----DGKVY 4023
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G L P + +++G H +S G +++ G+G
Sbjct: 4024 ATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGD 4083
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + + K + IACG HS + G ++Y +G G+ G+LG
Sbjct: 4084 DGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA---GGEIYTWGKGRYGRLG 4140
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNST 266
S+D+++ L + IG I+I S + ++ ++ + ++++WG G +
Sbjct: 4141 HGDSEDQMKP-KLVETLIGFKVIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGS 4198
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P + S L + G + LT G V G + L P
Sbjct: 4199 DGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHP-- 4256
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PK-VV 382
+K++ L G K+I IA G+ H ++ + TWG + GQLG G T + IH P+ VV
Sbjct: 4257 ---KKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDG-TMNAIHRPRLVV 4312
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAIS 408
L + NR V CGS + A S
Sbjct: 4313 TLQGKNINR-----VACGSAHSLAWS 4333
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 131/304 (43%), Gaps = 24/304 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P R + G V+ G ++
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV--QLVGGEQTLLAVTSDGKVYAT 4025
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G + +P + S + + ++A G +H L L D +VY +G G
Sbjct: 4026 GYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTD---GKVYSWGEG 4082
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
G+LG PQ+ L EIV I+ G SAA++A G +YTWG+G
Sbjct: 4083 DDGKLGHGNKN--GCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLG 4140
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ D P+ + + + F + G L +T D V G +G L
Sbjct: 4141 HGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4200
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T + ++ TWG G++ +LG G+ H
Sbjct: 4201 CKIPM-----KIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRH 4255
Query: 379 PKVV 382
PK +
Sbjct: 4256 PKKI 4259
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 166/367 (45%), Gaps = 33/367 (8%)
Query: 30 EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
++ +++WGA G LG G +EL P+++ + +ACG H LA++ +
Sbjct: 369 KEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVS-----V 423
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G++FSWG G G+LG ++D P + F+ IT +S HS V++SG L+T
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFEN--VNITFVSCNELHSASVTESGELYT 481
Query: 150 CGDGTFGQLG-HGDY----RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
FG+ G H Y R + P KV + ++CG+ ++ L + ++Y
Sbjct: 482 -----FGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSE---GELYS 533
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
FG GQLG + P + L+ + I +S A++ G ++ WG
Sbjct: 534 FGKNDCGQLGAG--HFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEF 591
Query: 262 ---GFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
G + + P PS+ G +H +VL+ G V + G G L
Sbjct: 592 GQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVA- 650
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
V+ T P +S + K+ ++ G EH+A VTE+ + TWG G G+LG G+ D
Sbjct: 651 -VNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQD 709
Query: 376 QIHPKVV 382
+ P +V
Sbjct: 710 RYVPTLV 716
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 36 VWSWGAGTDGQLGTGRL--HD---ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
VW WG+ GQLGT +L HD E N + + CGG+H + L+
Sbjct: 583 VWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWN----EEIQDIKCGGSHTVVLSCT----- 633
Query: 91 GKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V+ +G G SGQLG + Y P + I + G H+ V++SGCL+T
Sbjct: 634 GVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYT 693
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
G+G+ G+LGHGD++ P V S K V IACG H+
Sbjct: 694 WGNGSRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHT 734
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 24/249 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++S+G GQLG G +D P L+ + +S ++CG HV A+T + G V+
Sbjct: 530 ELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVT-----VNGDVW 584
Query: 95 SWGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WG GQLG ++ D + P TF++ I I G +H+ +S +G ++ G+
Sbjct: 585 LWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEE---IQDIKCGGSHTVVLSCTGVVYVFGN 641
Query: 153 GTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSG 208
G GQLG ++ ++P +S N + ++ CG+ H+ + + CL Y +G+G
Sbjct: 642 GQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCL----YTWGNG 697
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
RG+LG + R V P + L ++ I+ +AA + W + S
Sbjct: 698 SRGRLGHGDHQDRYV--PTLVESLAYKQVQSIACGAYHTAACV----IRAWVHDQETKSC 751
Query: 269 VNCPQSLPS 277
+ C Q +
Sbjct: 752 MACKQRFTT 760
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 181/413 (43%), Gaps = 33/413 (7%)
Query: 11 KGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS 70
K +A ++N E+E E++V WS G + G+LG G S + + +
Sbjct: 353 KPPNAFVSNDTTIFHEDEGEREV---WSCGQNSYGELGHGDTASRKSFERIQALQQKEII 409
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
+ G H + LT+ GKVF+ G +GQ G G + + D + H
Sbjct: 410 QIGAGNEHTVVLTA-----DGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGS-SQAH 463
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
G H+ VS G + TCG GQLGHG+ S S P + S NK V ++C H+
Sbjct: 464 AYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHT 523
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
++ +D +Y FG GQLG + R + PQ L D +IV ++ + +
Sbjct: 524 VLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVEALSDQQIVSVACGQYHTMVV 581
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
+ G + +G+ G ++ + P + L + G+ H + L +
Sbjct: 582 TVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLF 641
Query: 302 MLGGSHHGMLS-DPERVSSTRPLSVALEKVSN------LDGVKVIQIAAGAEHSAVVTEN 354
G + +G L SST L + ++ SN L+G +++IA G H+ V++N
Sbjct: 642 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 701
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ +G HGQLG G+T ++++P + D+F + L +GF + +
Sbjct: 702 GVMYVFGRNNHGQLGTGDTTERVYPFPI---DDFVGKRIAL---VAAGFYHTV 748
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 17 INNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDELSP-Q 59
I+ P+ E +QQ+V K +++G GQLG + ++L+P Q
Sbjct: 552 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQ 611
Query: 60 LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG----------EM 109
+ + CG H +AL S G +F++GR GQLG G ++
Sbjct: 612 VRGGLERQECLEIRCGYYHTIALCS-----GAHLFAFGRNDYGQLGLGRSNASSTSNLQL 666
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
+ + I I+ G H+ VSD+G ++ G GQLG GD P
Sbjct: 667 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYP 726
Query: 170 VKVSSFVNKNVHQIACGMRHSLVL 193
+ FV K + +A G H++VL
Sbjct: 727 FPIDDFVGKRIALVAAGFYHTVVL 750
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S +L++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 167/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3997 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4051
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4052 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4100
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4101 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4158
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4159 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSS-- 4214
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4215 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4274
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 4275 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 4329
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 4330 IRQISAGRCHSAAWT 4344
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3984 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4034
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4151
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4152 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4210 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4267
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4268 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4324
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4132
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4133 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4187
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 176/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 331 EVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVT-----LSGDLY 385
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G GHG V PK + +G ++ IS G H+ V+ +G LFT G
Sbjct: 386 TWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 443
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD +S S P +V S + ACG+ H+ +++ +GN ++
Sbjct: 444 DGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 503
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ L
Sbjct: 504 FTWGDGDKGRLG----------------------------HGDKETRLVP---------- 525
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C SL +F Q A G + LT G V +G S +G L +P+ P
Sbjct: 526 -------TCVASLVEP-NFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ-ADGMVP 576
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 577 ARVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLV 632
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 633 EALKDKQVR----SVVCGINFTAAICIH 656
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S +L++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4004 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4058
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 4059 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 4110
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4111 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4168
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 4169 PERVTALEGYQIGQVACGLNHTLAVSAD--GSVVWAFGDGDYGKLGLGNSTAKSS--PQK 4224
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 4225 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 4284
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G + Q
Sbjct: 4285 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNIRQ 4339
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 4340 ISAGRCHSAAWT 4351
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3991 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4041
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4042 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4158
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4159 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4217 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4274
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 4275 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4331
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4139
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 4140 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 4194
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 116/228 (50%), Gaps = 12/228 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V WG +GQLG G D L+P L +V MLA G H A+T GK++
Sbjct: 139 EVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE-----NGKLY 193
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P V G + ++ GW H+ V++SG ++T G
Sbjct: 194 GWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKM--VACGWRHTICVAESGNMYTFGWSK 251
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H P +V + +K + I G RH+ L D ++YG+G K GQ+G
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSD---GRLYGWGWNKFGQVG 308
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+S PQ+ GL D + + + A++ G++Y+WGRG
Sbjct: 309 CGNTEDQSS--PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRG 354
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 145/324 (44%), Gaps = 26/324 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V L+ G +H +AL S G V SWGRG GQLGHG+ + +P V+ D I
Sbjct: 16 VLALSAGASHSVALLS-----GDLVCSWGRGEDGQLGHGDAEERHFPTIVSALD--DCEI 68
Query: 129 THISAGWNHSGFVSDS-GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ++ G +H+ +S+S +++ G G FG+LGHG+ P + + V QIACG
Sbjct: 69 SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGD 128
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + D +V G+G + GQLG+ V P + + ++A + +
Sbjct: 129 SHCLAITTD---GEVLGWGRNQNGQLGLG--HTEDVLTPHKLTAFEGVAVKMLAAGAEHT 183
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGE 299
A++ G LY WG G D P + + A GW H + + G
Sbjct: 184 TAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGN 243
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P +V L K+ I G H+ + + +
Sbjct: 244 MYTFGWSKYGQLGHGDFADHLIP-----HQVQALKSKKIQAITGGWRHTFALDSDGRLYG 298
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN 383
WGW + GQ+G GNT DQ P++V
Sbjct: 299 WGWNKFGQVGCGNTEDQSSPQLVK 322
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 28/330 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G D PQ + V +ACG +H LA+T+ G+V
Sbjct: 88 VYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTD-----GEVLG 142
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR +GQLG G D L P +T F+G + ++AG H+ V+++G L+ G G +
Sbjct: 143 WGRNQNGQLGLGHTEDVLTPHKLTAFEG--VAVKMLAAGAEHTTAVTENGKLYGWGWGRY 200
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LG GD P +V++ + + +ACG RH++ + + GN +Y FG K GQLG
Sbjct: 201 GNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAES--GN-MYTFGWSKYGQLGH 257
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC---- 271
+P L +I I+ + AL ++G LY W G+N V C
Sbjct: 258 GD--FADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGW--GWNKFGQVGCGNTE 313
Query: 272 PQSLPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
QS P + Q + GW H L +T G V G G L + V + P +
Sbjct: 314 DQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRI 373
Query: 326 ALEKVSNLDGVKVIQI-AAGAEHSAVVTEN 354
++ + DG QI ++G+ + T N
Sbjct: 374 ---EILSSDGFACEQIESSGSSNCTSKTSN 400
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 26/358 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G + P +++ +S + CG H AL++ + V+S
Sbjct: 35 VCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKT----VYS 90
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+P+ G + I+ G +H ++ G + G
Sbjct: 91 WGWGDFGRLGHGNSSDLFIPQPIKALKG--LEVKQIACGDSHCLAITTDGEVLGWGRNQN 148
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +P K+++F V +A G H+ + ++ ++YG+G G+ G LG+
Sbjct: 149 GQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTEN---GKLYGWGWGRYGNLGL 205
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWG------RGFNSTSD 268
R V + E++ + A G R AE G++YT+G G +D
Sbjct: 206 GDREDRLVPDQVAAVA---GELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFAD 262
Query: 269 VNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P + + S A+ GW H L DG + G + G + + P
Sbjct: 263 HLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSP---- 318
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ V L V + G H+ +T+ + +WG G GQLG G+T D+ PK + +
Sbjct: 319 -QLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEI 375
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
V + V ++ G HS+ LL G+ V +G G+ GQLG R P + L D
Sbjct: 12 VRRQVLALSAGASHSVALLS---GDLVCSWGRGEDGQLGHGDAEERH--FPTIVSALDDC 66
Query: 236 EIVGISANGDRSAALS-AEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAAL 286
EI ++ D + ALS + +Y+WG G ++SD+ PQ + + L Q A
Sbjct: 67 EISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIAC 126
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H L +T DGEVL G + +G L P K++ +GV V +AAGAE
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTP-----HKLTAFEGVAVKMLAAGAE 181
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
H+ VTEN + WGWG +G LGLG+ D++ P V
Sbjct: 182 HTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQV 217
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 17/269 (6%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G R + +SAG +HS + + + G G GQLGHGD P VS+ + +
Sbjct: 11 GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISS 70
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ CG H+ L VY +G G G+LG + +PQ L +E+ I+
Sbjct: 71 VTCGADHTTALSNST--KTVYSWGWGDFGRLGHGNS--SDLFIPQPIKALKGLEVKQIAC 126
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVL 294
A++ +G + WGR G T DV P L + ++ A G H +
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAV 186
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +G++ G +G L +R P ++V+ + G + +A G H+ V E+
Sbjct: 187 TENGKLYGWGWGRYGNLGLGDREDRLVP-----DQVAAVAGELMKMVACGWRHTICVAES 241
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ T+GW ++GQLG G+ D + P V
Sbjct: 242 GNMYTFGWSKYGQLGHGDFADHLIPHQVQ 270
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 329 KVSNLDGVK--VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
K S+ GV+ V+ ++AGA HS + + +WG GE GQLG G+ ++ P +V+ D
Sbjct: 5 KASSSRGVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALD 64
Query: 387 EFQNRDTQLEVFCGSGFTYAIS 408
+ + V CG+ T A+S
Sbjct: 65 DCEIS----SVTCGADHTTALS 82
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 161/375 (42%), Gaps = 67/375 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K+++ G GT+G+LG G ++ P+L+ S + +A GG H LALT GK
Sbjct: 3004 KLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQ-----DGK 3058
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + R I I+ G HS ++ +G L+T G
Sbjct: 3059 VFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKR--IRDIACGSGHSAAIASNGELYTWGL 3116
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LGHGD + P V + + V Q+ACG R + + G VY +G G G+
Sbjct: 3117 GEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGC-VYTWGDGDFGK 3175
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG + P + L+ + +V + S AL+ G ++TWG+
Sbjct: 3176 LG--RGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGK----------- 3222
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
GD L G HH + P V R
Sbjct: 3223 -----------------------GDYFRLGHGNDHH--VRKPTLVEGLR----------- 3246
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNR 391
G K++ +A GA H VT+ + WG +HGQ G G T P +V+ L D NR
Sbjct: 3247 --GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVHELDDTRMNR 3304
Query: 392 DTQLEVFCGSGFTYA 406
V CGS + A
Sbjct: 3305 -----VSCGSSHSIA 3314
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 157/378 (41%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV+S G G G+LG G + P LL + +A GG H LAL+S G
Sbjct: 3985 KVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GH 4039
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + Y +P D I I+ G +HS ++ +G L+T G
Sbjct: 4040 VYSWGEGDDGKLGHGNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD P V + + V +ACG +L + D + V+ +G G
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4154
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + ++ + S AL+ G +YTWG+G
Sbjct: 4155 GKLG--RGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKG-------- 4204
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4205 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4223
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H ++ + TWG + GQLG G T P++V+ Q
Sbjct: 4224 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVH---ALQG 4280
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 4281 KKIT-RVACGSAHTLAWS 4297
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG G G+LG G HDE P+L+ ++ +ACG + AL++ G++
Sbjct: 530 VYSWGNGDGGRLGHGDNISHDE--PKLIETLLEKNIIFIACGSTYSAALSA-----SGEL 582
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG+ G+LGHG D P VT GH +G + + V+ SG +F+ GDG
Sbjct: 583 YTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 642
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G +L
Sbjct: 643 DYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTAR---GEVYTWGKGDAYRL 699
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + V P++ L D +I +S G AL+ + +Y WGR
Sbjct: 700 GHGNE--EHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGR 745
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 134/308 (43%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R ++ G V+ G +++
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYST 3989
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + + ++A G +H L L + VY +G G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GHVYSWGEG 4046
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG +S DR P++ L IEIV I+ G SAA+++ G LYTWG+
Sbjct: 4047 DDGKLGHGNRLSYDR------PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 4101 GRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4160
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
PL K+ +L G+ VI++ G++ S +T + A+ TWG G++ +LG G
Sbjct: 4161 GSDGCKVPL-----KIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4215
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4216 HVRRPRKV 4223
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + + LP L + + ++ A++A+G +Y+ G
Sbjct: 3934 IYGWGHNHRGQLGGLEGA--KIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGY 3991
Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
G T V P L S + + A+ G H L L+ +G V G G L
Sbjct: 3992 GAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4051
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R+S RP + V +L G++++ IA G HSA +T + TWG G +G+LG G
Sbjct: 4052 GHGNRLSYDRP-----KLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4106
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PKVV +++ ++V CGSG
Sbjct: 4107 DSDDQLRPKVVEALQDYK----VIDVACGSG 4133
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 33/309 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ L C +L L+ + G V+ GS Q + + + + KPVT H
Sbjct: 467 IKHLCCTERALLILS-----LSGNVYIMYYGSETQ--YPQRMHSFSDKPVTMIASH---- 515
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
S G ++ D GC+++ G+G G+LGHGD SH P + + + KN+ IACG
Sbjct: 516 ---SDGKHYLALTQD-GCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGST 571
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
+S L ++Y +G G G+LG + +V T+ H + V + ++
Sbjct: 572 YSAAL---SASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTL 628
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEV 300
++A G +++WG G + P+ + L + + G LT GEV
Sbjct: 629 CVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEV 688
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G D R+ V K + +L K+ ++ G H +TE++ +
Sbjct: 689 YTWGK------GDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYG 742
Query: 360 WGWGEHGQL 368
WG ++GQ+
Sbjct: 743 WGRNDYGQI 751
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKD-CLGNQVYGFGSGKRGQLG----VSKDRIR 221
P ++ SF +K V IA +H L L +D C VY +G+G G+LG +S D
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQDGC----VYSWGNGDGGRLGHGDNISHDE-- 551
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P++ L + I+ I+ SAALSA G LYTWGRG S DV P +L
Sbjct: 552 ----PKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVP-TL 606
Query: 276 PSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
++L G + L +T G V G +G L S P + V
Sbjct: 607 VTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTP-----KIV 661
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L + V+++ G + SA +T + TWG G+ +LG GN +PK++
Sbjct: 662 DKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLI 713
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
SSP + + + C R L+L L VY G Q R+ S S
Sbjct: 454 SSPFYCDAIAELGIKHLCCTERALLIL---SLSGNVYIMYYGSETQY---PQRMHSFSDK 507
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--------NSTSDVNCPQSLPSS 278
VT+ + ++G AL+ +G +Y+WG G N + D P+ + +
Sbjct: 508 PVTM-------IASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDE--PKLIETL 558
Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
L + A G + L+ GE+ G ++G L T P V+ L G
Sbjct: 559 LEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVP-----TLVTTLKGH 613
Query: 337 KVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V+ +A G+ + VT + + +WG G++G+LG G + PK+V D+ + +
Sbjct: 614 MVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIV---DKLLDINV- 669
Query: 395 LEVFCGSGFTYAIS 408
+ VFCG F+ A++
Sbjct: 670 VRVFCGGQFSAALT 683
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 200/418 (47%), Gaps = 56/418 (13%)
Query: 27 EEEEQQVVKVWSWG---------AGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGG 76
++E + V+ WG G+D + TGR+ D L P+ L + + V + CG
Sbjct: 28 QDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTGRI-DILLPKPLESNLVLDVYHVDCGV 86
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
H + G+VF+WG S G+LGHG D + P+ V + ++ G
Sbjct: 87 KHAALVMK-----NGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS--NVDFVACGEF 139
Query: 137 HSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVL 193
H+ V+ +G L+T GDGT+ G LGHG+ H P ++S + V ++CG H+ ++
Sbjct: 140 HTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALI 199
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ------------VTIGL-HDIEIVGI 240
+G Q++ FG G G LG ++SVS P+ V G+ H IV +
Sbjct: 200 TS--MG-QLFTFGDGSFGVLG--HGDLKSVSYPREVESLSGLKTIAVACGVWHTAAIVEV 254
Query: 241 SANGDRSAALSAEGHLYTWGRGFN-----STSDVNCPQSLPSSL---SFSQAALGWNHVL 292
S+ + G L+TWG G + + ++L F + A G + +
Sbjct: 255 IVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTV 314
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
LT G+VL +G + +G L +P S R + +K+ G +V+QIA G+ H AV+T
Sbjct: 315 ALTTSGQVLSMGNAVYGQLGNPH--SDGRIPCLVEDKIV---GEQVLQIACGSYHVAVLT 369
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ TWG G +G+LG G+T D+ KV L + ++R + + CG+ FT AI ++
Sbjct: 370 NRSEVFTWGKGANGRLGHGDTEDR---KVPTLVEALKDRAVRY-IACGANFTAAICQY 423
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 20/289 (6%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ++S G HS V+ +G L+T G +GQLGHG+ +S++ P V + V+ +ACG
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H++ + +Y FG G GQLG +P++ GL + ++ D S
Sbjct: 97 NHTIAATES---GHLYSFGCGGDGQLG--HGDAEDSHVPKIIEGLDVQKYKHLACGSDFS 151
Query: 248 AALSAEGHLYTW---GRGFNST-SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
AA++ G LYTW G G N D P L + G+ H+ V+T DG + M
Sbjct: 152 AAITENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMC 211
Query: 304 GGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L D E++ +T L+K+ +++ +V+ A GAE +AVVT+N ++ T+G
Sbjct: 212 GEKEGGKLGLDHEQLDNTSQ----LQKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQ 266
Query: 363 GEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G GQLGLG++ + P+ + L ++ + R V CG FT I++H
Sbjct: 267 GNQGQLGLGSSMMETEFPERIPLFEKVKAR----TVSCGESFTAVITKH 311
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 166/368 (45%), Gaps = 69/368 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++++G GQLG G P ++ V M+ACG H +A T G ++
Sbjct: 55 KLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATES-----GHLY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G G GQLGHG+ D+ PK + D +Y H++ G + S ++++G L+T G
Sbjct: 110 SFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKY--KHLACGSDFSAAITENGELYTWGSCG 167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ G G+ + + ++ V ++CG H V+ +D +Y G + G+LG
Sbjct: 168 EGQNGLGE----DTEIPTRLHLHGKVRMVSCGYYHMAVVTED---GSLYMCGEKEGGKLG 220
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ +++ + S Q + D ++V + + +A ++ G +YT+G+G
Sbjct: 221 LDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQG------------ 267
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+Q LG ++ T PER+ PL EK
Sbjct: 268 -------NQGQLGLGSSMMET----------------EFPERI----PL---FEK----- 292
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC--DQIHPKVVNLGDEFQNRD 392
VK ++ G +AV+T++ + T+G G HG+LGLG+ C + P+ V F N
Sbjct: 293 -VKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK---RFNNFT 348
Query: 393 TQLEVFCG 400
++ V CG
Sbjct: 349 VKM-VTCG 355
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 171/357 (47%), Gaps = 28/357 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+W+WG DGQLG G + +P + +++L++++ + CGG H +AL S G+V+
Sbjct: 175 KLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDS-----LGRVW 229
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G+LG G + PV + I ISAG +S +S G + T G +
Sbjct: 230 AWGYNGDGELGGG-TTENNSNVPVPVPVPNLTDIIAISAGGEYSIALSSDGSVLTWGANS 288
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG+G+ +S P K+SS + I+ G HSL + +D VY +G GQ+G
Sbjct: 289 DGQLGNGNTDQNSVPTKISSL--PLMKGISAGEAHSLAVTEDGF---VYAWGLNDEGQIG 343
Query: 215 VSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTS 267
+ + L V + GL DI+ V A S AL +G ++ WG G + +
Sbjct: 344 NGEKSADNPVLNPVQVQGLTDIDAV--CAGATFSLALGIDGRVWAWGLNDEGQLGDGTNT 401
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P + + S A G +H L + +G+V G + G L D SS+ PL V
Sbjct: 402 NSTTPVEVTNLAKISAVACGSDHSLAIR-NGKVKSWGLNDEGQLGDGSTRSSSAPLDVT- 459
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+S+ ++ +AAG HS +T I WG GQLG G PK ++L
Sbjct: 460 -GLSD-----IVYVAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRSSRTPKTIDL 510
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 133/287 (46%), Gaps = 26/287 (9%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
IS GW+HS + G L+ G GQLG G S ++PV V + + CG H
Sbjct: 159 QISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDH 218
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQL-GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
S+ L D LG +V+ +G G+L G + + +V +P L D I+ ISA G+ S
Sbjct: 219 SMAL--DSLG-RVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTD--IIAISAGGEYSI 273
Query: 249 ALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLM 302
ALS++G + TWG N +D N + SSL + + G H L +T DG V
Sbjct: 274 ALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYA 333
Query: 303 LGGSHHGMLSDPERVSSTRPL--SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + G + + E+ S+ P+ V ++ ++++D V AGA S + + + W
Sbjct: 334 WGLNDEGQIGNGEK-SADNPVLNPVQVQGLTDIDAV-----CAGATFSLALGIDGRVWAW 387
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
G + GQLG G + P E N V CGS + AI
Sbjct: 388 GLNDEGQLGDGTNTNSTTPV------EVTNLAKISAVACGSDHSLAI 428
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 272 PQSLPSS-LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
PQ P+ + Q + GW+H L L +G++ G + G L D S T P++V + +
Sbjct: 147 PQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINAL 206
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ + V G +HS + + WG+ G+LG G T
Sbjct: 207 TTITAVDC-----GGDHSMALDSLGRVWAWGYNGDGELGGGTT 244
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 155/355 (43%), Gaps = 24/355 (6%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG + G+LG G D SP +N+ + ++++ +A G H LA+TS G +WG
Sbjct: 64 AWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTS-----AGTALAWG 118
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ GQLG G + + PV T+T +S G H+ V+ +G GD +GQ
Sbjct: 119 DNAFGQLGDGTTIPSSS-TPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQ 177
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G +PV V+ + +A G HSL + +G GQLG
Sbjct: 178 LGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTS---AGTALAWGDNSSGQLG--D 232
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDV 269
S+P I ++A G S AL++ G + WG G ++S
Sbjct: 233 GTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSST 292
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+P+ + + A G H L +T G+VL G + G L D S+ P++V +
Sbjct: 293 PVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPA 352
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
G + +A G+ HS VT + WG GQLG G+T I P V+L
Sbjct: 353 -----GTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDL 402
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 154/350 (44%), Gaps = 29/350 (8%)
Query: 71 MLACGGAHVLALTSPSSVIG--GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ + G A VLA PS+ G G +WG S+G+LG G D+ P V G TI
Sbjct: 38 VTSVGAARVLAQGVPSAAAGPPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNVPAG--TTI 95
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGM 187
T ++ G HS V+ +G GD FGQLG G S S+PV V V ++ G
Sbjct: 96 TAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGG 155
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H+L + +G GQLG S R R+ V G I ++A
Sbjct: 156 VHNLAVTS---AGTALAWGDNFWGQLGDGSTTRSRTPVAVNVPAG---TTITAVAAGQGH 209
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDG 298
S A+++ G WG G + +D + P + +P+ + + A G H L LT G
Sbjct: 210 SLAVTSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGG 269
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+VL G + G L D SS+ P++V + G V +AAG HS VT ++
Sbjct: 270 DVLAWGANGSGQLGDGTTTSSSTPVAVDVPA-----GTTVTAVAAGGRHSLAVTSAGDVL 324
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
WG GQLG G+T P VN+ T V GSG + A++
Sbjct: 325 AWGDNTAGQLGDGSTTHSSTPVAVNV----PAGTTITAVATGSGHSLAVT 370
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 146/335 (43%), Gaps = 34/335 (10%)
Query: 38 SWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+WG GQLG G + +P +++ + ++V+ L+ GG H LA+TS G +W
Sbjct: 116 AWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTS-----AGTALAW 170
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLG G + P V G TIT ++AG HS V+ +G GD + G
Sbjct: 171 GDNFWGQLGDGSTTRSRTPVAVNVPAG--TTITAVAAGQGHSLAVTSAGTALAWGDNSSG 228
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-- 214
QLG G S PV + +A G HSL L G V +G+ GQLG
Sbjct: 229 QLGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTS---GGDVLAWGANGSGQLGDG 285
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
S +V +P T + ++A G S A+++ G + WG G ST
Sbjct: 286 TTTSSSTPVAVDVPAGT------TVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGST 339
Query: 267 SDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + P + +P+ + + A G H L +T L G + G L D SS P++
Sbjct: 340 THSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVA 399
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V L G V IA G+ HS + + + T
Sbjct: 400 VDLPA-----GTTVTAIAGGSFHSLAIVPSTSTTT 429
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WGA GQLG G +P +++ + ++V+ +A GG H LA+TS G V
Sbjct: 270 DVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTS-----AGDVL 324
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG ++GQLG G + P V G TIT ++ G HS V+ + GD T
Sbjct: 325 AWGDNTAGQLGDGSTTHSSTPVAVNVPAG--TTITAVATGSGHSLAVTSTDTALAWGDNT 382
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
FGQLG G S PV V V IA G HSL ++
Sbjct: 383 FGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAIVPST 425
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 185/387 (47%), Gaps = 73/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG + G+LG G + + P+L+ + ++V +ACG H A+T + G+++
Sbjct: 299 ELFTWGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGEFHTCAVT-----MAGELY 353
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK + +G + + ++ G H+ ++ +G LFT G
Sbjct: 354 TWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAL--VTCGPWHTALITSTGQLFTFG 411
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--------GNQVY 203
DGTFG LGHGD + S P +V S +ACG+ H+ +++ + ++++
Sbjct: 412 DGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLF 471
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ A L
Sbjct: 472 TWGDGDKNRLG----------------------------HGDKDARL------------- 490
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ C L S +F + A G + + LT GEV +G S +G L +P+ S +
Sbjct: 491 ----EPTCVSLLIDS-NFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQ--SDGKVP 543
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +K L G V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 544 CLVKDK---LAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLV- 599
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS ++ AI H
Sbjct: 600 --EALKDRHVKY-IACGSNYSAAICLH 623
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 160/351 (45%), Gaps = 37/351 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG G G+LG P ++ +V+M+ACGG+H +AL S G+VFS
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSK-----GQVFS 218
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD- 152
WG G G LGHG + D P DG + H++ NHS +S+ G L+T G
Sbjct: 219 WGAGPQGCLGHGNLRDRYSP---LMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKA 275
Query: 153 GTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G F LG+ D + P V + + Q+ACG H+LV+ ++ +VY FG K
Sbjct: 276 GPF--LGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEE---GRVYSFGINKF 330
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG D ++++ P + L + I +S SAA+ +G L+ WG G
Sbjct: 331 GELGQGHD--KAITKPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQG 386
Query: 271 CPQSL--PSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS--T 320
P+SL P+ ++ + G+ H +T +G G + P V +
Sbjct: 387 EPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELS 446
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
P + L G++ QI GA + +VT + TWG GQLG G
Sbjct: 447 SPRGIVLPS-----GIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNG 492
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 140 FVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ D+ C L+ G G G+LGH D + P V S + +NV IACG H++ L
Sbjct: 156 LLKDNSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSK-- 213
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
QV+ +G+G +G LG R R L + L D+ +V ++ + SA +S +G+LYT
Sbjct: 214 -GQVFSWGAGPQGCLGHGNLRDRYSPL-MIDGPLRDVNVVHVACYENHSAVISEDGNLYT 271
Query: 259 WGRG---FNSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
WG+ D Q+ P + Q A G +H LV+ +G V G + G
Sbjct: 272 WGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFG 331
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L + T+P V NL V + +++ G HSA + E+ + WGWG GQLG
Sbjct: 332 ELGQGHDKAITKP-----TMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLG 384
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G P VN F ++ + +V CG G T AI+
Sbjct: 385 QGEPKSLFSPTPVN---GFNDQPLE-DVSCGYGHTAAIT 419
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 54/337 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GK 92
+V+SWGAG G LG G L D SP +++ L V+++ HV + S+VI G
Sbjct: 215 QVFSWGAGPQGCLGHGNLRDRYSPLMID-GPLRDVNVV-----HVACYENHSAVISEDGN 268
Query: 93 VFSWGRG---------SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+++WG+ S + +VDALY G R I ++ G +H+ + +
Sbjct: 269 LYTWGKAGPFLGYMDDSVTKQTKPRLVDALY--------GTR--IVQVACGRSHTLVIDE 318
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G +++ G FG+LG G ++ + P V + V ++ +++CG HS + +D ++
Sbjct: 319 EGRVYSFGINKFGELGQGHDKAITKPTMVPNLV--SICKVSCGRHHSAAIDED---GVLF 373
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G RGQLG + +S+ P G +D + +S +AA++A G Y WG
Sbjct: 374 MWGWGARGQLG--QGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGD-- 429
Query: 264 NSTSDVNCPQS------------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
N++S P S LPS + +Q G N +++T G++ G + G L
Sbjct: 430 NASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQL 489
Query: 312 SDPE-RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+ E + + ++P+ V +L +V +A G +H
Sbjct: 490 GNGEAKKTFSQPMP-----VESLSEKRVKMVACGEDH 521
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 36 VWSWG-AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WG AG + + P+L++ + + +ACG +H L + G+V+
Sbjct: 269 LYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEE-----GRVY 323
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G G+LG G D KP + +I +S G +HS + + G LF G G
Sbjct: 324 SFGINKFGELGQGH--DKAITKPTMV--PNLVSICKVSCGRHHSAAIDEDGVLFMWGWGA 379
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ +S SP V+ F ++ + ++CG H+ + + + Y +G Q G
Sbjct: 380 RGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVA---YCWGDNASSQCG 436
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDV 269
V +S P+ + I I+ + + +++ G L+TWG N +
Sbjct: 437 VPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKK 496
Query: 270 NCPQSLP----SSLSFSQAALGWNHVLVLTGDGEV 300
Q +P S A G +H+ L G G V
Sbjct: 497 TFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWV 531
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 156/354 (44%), Gaps = 33/354 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG T GQLG G SP + LS V +A G H LAL S G V
Sbjct: 115 TVRAWGNNTYGQLGDGTTPHRASPGAV--PGLSGVVAIAAGNNHALALLSD-----GTVR 167
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G P V G + I+AG NHS V G + G+ T
Sbjct: 168 AWGYNAYGQLGDGTTTQRRTPVAVLGLTG----VVAIAAGENHSLAVLADGTVRAWGNNT 223
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G +SPV VSS V IA G HSL +L D + +G+ + R G
Sbjct: 224 YGRLGDGTTTQRTSPVLVSSLTG--VTAIAAGANHSLAVLADGT-VRAWGYNASGRLGDG 280
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ R V++P +T + ISA G S AL A+G WG G + S+
Sbjct: 281 TTTQRATPVAVPGLT------GVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSN 334
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S + + G NH L L DG G + G L D ++ R L V L
Sbjct: 335 RTSPVLVSSLTGVTALSAGGNHSLALLADGTARAWGANVSGQLGD--GTTTQRTLPVGLP 392
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ V +AAG HS V N + WG +GQLG G+T + P VV
Sbjct: 393 GLTG-----VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVV 441
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 161/349 (46%), Gaps = 42/349 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WGA GQLG G P + L L+ V+ LA GG H LA+ + G V +WG
Sbjct: 368 AWGANVSGQLGDGTTTQRTLP--VGLPGLTGVAALAAGGYHSLAV-----LANGTVRAWG 420
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ GQLG G P V G + ++AG++HS + G + G+ GQ
Sbjct: 421 HNTYGQLGDGSTAQRTAPVVVPALTG----VVSLTAGYDHSLALLSDGTVRAWGNNASGQ 476
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACG-MRHSLVLLKDCLGNQVYGFGSGKRGQLG-- 214
LG G +PV+VS N V ++ G + H+L LL D V +G GQLG
Sbjct: 477 LGDGTTNQRGTPVQVSGLTN--VVALSGGKLYHALALLSD---GTVRAWGYNMNGQLGDG 531
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNST 266
+ +R V++ +T +V I+A GD S AL + G + +WG R +++
Sbjct: 532 STSNRWTPVAVSGLT------NVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTY 585
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
S P+++P + A G NHVL L DG V G + G L D V P+ V
Sbjct: 586 SP--TPKAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQV- 642
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++N V+ IA G +HS + + + WG+ QLG G+T +
Sbjct: 643 -PGLTN-----VVAIATGWDHSLALRADGTVYAWGYNYARQLGDGSTAN 685
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 157/358 (43%), Gaps = 38/358 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG T G+LG G SP L+ SSL+ V+ +A G H LA+ + G V
Sbjct: 215 TVRAWGNNTYGRLGDGTTTQRTSPVLV--SSLTGVTAIAAGANHSLAV-----LADGTVR 267
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SG+LG G P V G +T ISAG HS + G G
Sbjct: 268 AWGYNASGRLGDGTTTQRATPVAVPGLTG----VTEISAGGGHSLALLADGTARAWGSNV 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + +SPV VSS V ++ G HSL LL D +G+ GQLG
Sbjct: 324 SGQLGDGTVSNRTSPVLVSSLTG--VTALSAGGNHSLALLAD---GTARAWGANVSGQLG 378
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ R V LP +T + ++A G S A+ A G + WG G ST
Sbjct: 379 DGTTTQRTLPVGLPGLT------GVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGST 432
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ P +P+ G++H L L DG V G + G L D P+ V+
Sbjct: 433 AQRTAPVVVPALTGVVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVS 492
Query: 327 -LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
L V L G K+ H+ + + + WG+ +GQLG G+T ++ P V+
Sbjct: 493 GLTNVVALSGGKLY-------HALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVS 543
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 156/351 (44%), Gaps = 38/351 (10%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+ GQLG G + + SP L+ SSL+ V+ L+ GG H LAL + G +WG
Sbjct: 318 AWGSNVSGQLGDGTVSNRTSPVLV--SSLTGVTALSAGGNHSLAL-----LADGTARAWG 370
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG G P + G + ++AG HS V +G + G T+GQ
Sbjct: 371 ANVSGQLGDGTTTQRTLPVGLPGLTG----VAALAAGGYHSLAVLANGTVRAWGHNTYGQ 426
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G ++PV V + V + G HSL LL D V +G+ GQLG
Sbjct: 427 LGDGSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLSD---GTVRAWGNNASGQLGDGT 481
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDR---SAALSAEGHLYTWGRGFN------STSD 268
R P GL ++ ++ +G + + AL ++G + WG N STS+
Sbjct: 482 TNQRGT--PVQVSGLTNV----VALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSN 535
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P ++ + A G ++ L L +G V G +G L + P A+
Sbjct: 536 RWTPVAVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLG--RDYDTYSPTPKAVP 593
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V+N V+ IAAGA H + + + WG + GQLG G T + P
Sbjct: 594 GVTN-----VVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTP 639
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 134/318 (42%), Gaps = 31/318 (9%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LA G AH L L +P G V +WG +SGQLG G P V G +
Sbjct: 50 LASGKAHSL-LATPD----GTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAG----AVAV 100
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG +S + G + G+ T+GQLG G +SP V V IA G H+L
Sbjct: 101 SAGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGL--SGVVAIAAGNNHAL 158
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
LL D V +G GQLG R P +GL +V I+A + S A+
Sbjct: 159 ALLSD---GTVRAWGYNAYGQLGDGTTTQRRT--PVAVLGL--TGVVAIAAGENHSLAVL 211
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+G + WG G +T+ P + S + A G NH L + DG V G
Sbjct: 212 ADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGY 271
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ G L D P++V L GV +I+AG HS + + WG
Sbjct: 272 NASGRLGDGTTTQRATPVAV-----PGLTGVT--EISAGGGHSLALLADGTARAWGSNVS 324
Query: 366 GQLGLGNTCDQIHPKVVN 383
GQLG G ++ P +V+
Sbjct: 325 GQLGDGTVSNRTSPVLVS 342
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
++A G HSL+ D V +G GQLG RS P GL V +S
Sbjct: 49 RLASGKAHSLLATPD---GTVRAWGDNASGQLGDGTTTQRSS--PTAVPGL--AGAVAVS 101
Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
A G+ S AL +G + WG G +T P ++P A G NH L L
Sbjct: 102 AGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLSGVVAIAAGNNHALALL 161
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
DG V G + +G L D P++V L V+ IAAG HS V +
Sbjct: 162 SDGTVRAWGYNAYGQLGDGTTTQRRTPVAV-------LGLTGVVAIAAGENHSLAVLADG 214
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ WG +G+LG G T + P +V+
Sbjct: 215 TVRAWGNNTYGRLGDGTTTQRTSPVLVS 242
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG GQLG G +P + + L++V +A G H LAL + G V+
Sbjct: 616 TVYAWGRNDFGQLGDGTTVQRNTP--VQVPGLTNVVAIATGWDHSLALRAD-----GTVY 668
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG + QLG G + P PV + ++AG N S + SG + GD
Sbjct: 669 AWGYNYARQLGDGSTANYRQTPAPVPGLT----NVVAVTAGGNQSLALLSSGAVHAWGDN 724
Query: 154 TFGQLGHGDYRSHSSPVKVSSF 175
+ G+LG+G + +PV V+
Sbjct: 725 SHGELGNGSTLTPPAPVAVTGL 746
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 168/376 (44%), Gaps = 30/376 (7%)
Query: 20 AKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGA 77
++P I E + ++ WG+ G+LG G + DE L P+ L+ + + +ACG
Sbjct: 12 SEPVIAVEYPLHKKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGEN 71
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
+ + +T G+++S G GQLGH + L P + + G H
Sbjct: 72 YTVVITQI-----GEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYH 122
Query: 138 SGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
+ +++ G LF+ G T GQLG + SSP V + V QIACGM+H+ L +
Sbjct: 123 TLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNN 182
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
++Y +GS GQLG+ D I+ P+ I I I+ G S A+S G +
Sbjct: 183 ---GELYSWGSNSEGQLGLGTD-IKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238
Query: 257 YTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+ WG+ G N T D N P L + + AA G + LT DG V G +
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMY 298
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQ 367
G L + P +V L G V QI+ G H+ + +R + WG G GQ
Sbjct: 299 GQLGHGSNSNEILP-----RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQ 353
Query: 368 LGLGNTCDQIHPKVVN 383
LG +T P+VV+
Sbjct: 354 LGNHSTRSVTTPQVVH 369
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ ++GQLG G + E+ P+ ++ ++ +ACGG H +A++ G V
Sbjct: 184 ELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISK-----SGAV 238
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG + D P + + I + + G S F++ G +FTCG G
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAK--ICYAACGEEFSVFLTVDGGVFTCGAG 296
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 297 MYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 354
Query: 214 GVSKDRIRSVSLPQVTIG 231
G RSV+ PQV G
Sbjct: 355 G--NHSTRSVTTPQVVHG 370
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 178/377 (47%), Gaps = 49/377 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++SWGA + GQLG G D+ P+ + + + GG H L LT G ++S
Sbjct: 27 MFSWGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTD-----CGAIYS 81
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G S GQLG G + K + H + ++ GW+ +++ G L+ G F
Sbjct: 82 CGWNSKGQLGLGHTDNLSVFKRI----DHLPPVIKVTCGWDFCLAITEVGDLYAWGCNVF 137
Query: 156 GQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG + S ++ P K+ F ++NV IA G+RHSL + D +++ +GS ++GQLG
Sbjct: 138 GQLGIPEIDSFTAIPTKIQIF-SRNVTSIAAGLRHSLAVTND---GKLWSWGSARKGQLG 193
Query: 215 VSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGR------------ 261
+ + L +V +H +E I +S+ S AL+A G++Y WG
Sbjct: 194 NDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNMYLWGSNKHNQLTNSVQG 253
Query: 262 ----GFNSTSDV-NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML- 311
G +S D+ P L L + L GW H+L +T D V G + + L
Sbjct: 254 VVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLG 313
Query: 312 -----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
++ + T+P + + K + QIA G+EH+ ++++ ++ WGW EHG
Sbjct: 314 ISLTGNNCAKKDVTKPKELVILK-------DIKQIACGSEHNLALSDDNKVLAWGWNEHG 366
Query: 367 QLGLGNTCDQIHPKVVN 383
G G + + P+V++
Sbjct: 367 SCGNGKEENVLTPQVID 383
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 13/179 (7%)
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
CL ++ +G+ GQLG+ +S P+ + + D +IV ++ G + L+ G +
Sbjct: 22 CLQRGMFSWGANSYGQLGLGHQDDKSK--PEKILKIPDGKIVDVTGGGGHTLLLTDCGAI 79
Query: 257 YTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
Y+ G G T +++ + + + GW+ L +T G++ G + G
Sbjct: 80 YSCGWNSKGQLGLGHTDNLSVFKRIDHLPPVIKVTCGWDFCLAITEVGDLYAWGCNVFGQ 139
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L PE + S + ++ S V IAAG HS VT + + +WG GQLG
Sbjct: 140 LGIPE-IDSFTAIPTKIQIFSR----NVTSIAAGLRHSLAVTNDGKLWSWGSARKGQLG 193
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL-----NLSSLSSVSMLACGGAHVLALTSPSSVI 89
K+WSWG+ GQLG + + QLL + L ++S ++ G H ALT+
Sbjct: 180 KLWSWGSARKGQLGNDQ--SKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTA----- 232
Query: 90 GGKVFSWGRGSSGQLGH---------GEMVDALYPKP----VTFFDGHRYTITHISAGWN 136
G ++ WG QL + G + + P P + F G + H +GW
Sbjct: 233 CGNMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVH--SGWT 290
Query: 137 HSGFVSDSGCLFTCGDGTFGQLG---HGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLV 192
H ++ +F G + QLG G+ + K V K++ QIACG H+L
Sbjct: 291 HILAITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDIKQIACGSEHNLA 350
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
L D N+V +G + G G K+ +V PQV L
Sbjct: 351 LSDD---NKVLAWGWNEHGSCGNGKE--ENVLTPQVIDDL 385
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 38/252 (15%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V +++WG GQLG + + P + + S +V+ +A G H LA+T+
Sbjct: 125 EVGDLYAWGCNVFGQLGIPEIDSFTAIPTKIQIFS-RNVTSIAAGLRHSLAVTN-----D 178
Query: 91 GKVFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
GK++SWG GQLG+ G + PK V + I+ +S+G HS ++ G
Sbjct: 179 GKLWSWGSARKGQLGNDQSKTGYQLLQRVPKQVHKLEN----ISSVSSGSYHSTALTACG 234
Query: 146 CLFTCGDGTFGQLGHG-------------DYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
++ G QL + D + + + F + + + G H L
Sbjct: 235 NMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILA 294
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKD----RIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
+ D + V+G+G QLG+S + V+ P+ + L DI+ I+ + +
Sbjct: 295 ITHD---SNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDIK--QIACGSEHNL 349
Query: 249 ALSAEGHLYTWG 260
ALS + + WG
Sbjct: 350 ALSDDNKVLAWG 361
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 58 PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLG------HGEM 109
P LNL +LA G H+LA+T S+V G WGR QLG +
Sbjct: 269 PTKLNLELFGGRQILAVHSGWTHILAITHDSNVFG-----WGRNDYSQLGISLTGNNCAK 323
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
D PK + I I+ G H+ +SD + G G G+G + +P
Sbjct: 324 KDVTKPKELVILKD----IKQIACGSEHNLALSDDNKVLAWGWNEHGSCGNGKEENVLTP 379
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKD 196
+ + + I H L KD
Sbjct: 380 QVIDDLAKEKIRLIDKFTTHRYYLRKD 406
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S +L++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + Q++AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 167/384 (43%), Gaps = 68/384 (17%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 3998 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4052
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4053 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4101
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4102 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4159
Query: 166 HSSPVKVSSFVNKNVHQ---------IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
P +V++ + Q +ACG+ H+L + D G+ V+ FG G G+LG+
Sbjct: 4160 KKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLG 4217
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVN 270
+S PQ L I I ++ S AL+ +G +YT+G+ + N
Sbjct: 4218 NSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHN 4275
Query: 271 CPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
PQ +P + + A+G H L LT G++ G + G L P V +
Sbjct: 4276 RPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTV- 4334
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT 352
L G V QI+AG HSA T
Sbjct: 4335 ----LQGKNVRQISAGRCHSAAWT 4354
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 169/367 (46%), Gaps = 35/367 (9%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3985 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4035
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4036 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4095
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4096 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4152
Query: 214 GVSK-------DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWG 260
G+ +R+ ++ Q+ + I ++ + + A+SA+G + +G
Sbjct: 4153 GLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYG 4212
Query: 261 R-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+ G +++ + PQ + + + A G + LT DG+V G L +
Sbjct: 4213 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRAR 4272
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ RP ++V L GV + +A GAEH+ +T I WG GQLGLG+T
Sbjct: 4273 NHNRP-----QQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVR 4327
Query: 378 HPKVVNL 384
P +V +
Sbjct: 4328 EPTLVTV 4334
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 4133
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ-----NRDTQLEVFCGSGFT 404
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q N+ V CG T
Sbjct: 4134 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHT 4193
Query: 405 YAIS 408
A+S
Sbjct: 4194 LAVS 4197
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 181/393 (46%), Gaps = 77/393 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++S+V +ACG H A+T + G+++
Sbjct: 300 EVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVT-----MAGEIY 354
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK ++ +G + ++ G H+ V+ +G LFT G
Sbjct: 355 TWGDGTHNAGLLGHGNDVSHWIPKRISGPLEG--LQVASVTCGPWHTALVTSTGQLFTFG 412
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHGD + + P +V S ACG+ H+ +++ + +++
Sbjct: 413 DGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLF 472
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 473 TWGDGDKNRLG----------------------------HGDKEPRLK------------ 492
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P +P+ + ++ + H L LT G V +G + +G L +P +
Sbjct: 493 --------PTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNP---YADG 541
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
L +E L G V +IA GA H AV+T + TWG G +G+LG G+ D+ P +
Sbjct: 542 KLPCLVE--DKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKAPIL 599
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
V + ++R + + CG+ +T AI H L S
Sbjct: 600 V---EALKDRHVKY-IACGANYTAAICLHKLVS 628
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 118/292 (40%), Gaps = 80/292 (27%)
Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
D L P+P+ D H HI+ G H+ V+ G +FT G+ + G+LGHG +
Sbjct: 266 ADVLLPRPLESNVVLDVH-----HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDV 320
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVS 224
P V S V +ACG H+ + + ++Y +G G G LG D VS
Sbjct: 321 IQPRLVESLAVSTVDFVACGEFHTCAV---TMAGEIYTWGDGTHNAGLLGHGND----VS 373
Query: 225 --LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF 281
+P+ G L +++ ++ +A +++ G L+T+
Sbjct: 374 HWIPKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTF---------------------- 411
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
GDG +LG HG D E V+ R +V +L G++ I
Sbjct: 412 --------------GDGTFGVLG---HG---DRENVAYPR-------EVESLSGLRTIAA 444
Query: 342 AAGAEHSAVVTE-----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
A G H+A V E + + TWG G+ +LG G+ ++ P V
Sbjct: 445 ACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 496
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 18/245 (7%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG +GQLG G D L PQ + S+ M+A G H A+T G++F WG
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTED-----GELFGWGW 55
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
G G LG G+ D L P+ V+ DG + + ++ GW H+ VS G L+T G +GQL
Sbjct: 56 GRYGNLGLGDRNDRLVPQKVSSVDGDKMVM--VACGWRHTISVSSLGGLYTYGWSKYGQL 113
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
GHGD+ P ++ + N+ QI+ G RH++ L D ++YG+G K GQ+G D
Sbjct: 114 GHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD---GKLYGWGWNKFGQVGAG-D 169
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCP 272
I S Q+ D +++ IS + A++ + ++++WGRG N + D N P
Sbjct: 170 NIDHCSPIQIKF-PQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 228
Query: 273 QSLPS 277
L +
Sbjct: 229 MILEA 233
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 10/180 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG G G LG G +D L PQ ++ + M+ACG H ++++S +GG ++
Sbjct: 49 ELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSS----LGG-LY 103
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLGHG+ D L P + G I+ IS GW H+ ++ G L+ G
Sbjct: 104 TYGWSKYGQLGHGDFEDRLVPHRLEALRGD--NISQISGGWRHTMALTTDGKLYGWGWNK 161
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQ+G GD H SP+++ ++ V QI+CG RH+L + V+ +G G GQLG
Sbjct: 162 FGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDK---QNVFSWGRGTNGQLG 218
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 120/260 (46%), Gaps = 26/260 (10%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR +GQLG G D+L P+ + F+G +I ++AG H+ V++ G LF G G +
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEG--ISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LG GD P KVSS + +ACG RH++ + LG +Y +G K GQLG
Sbjct: 59 GNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV--SSLGG-LYTYGWSKYGQLGH 115
Query: 216 S--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV---- 269
+DR+ +P L I IS + AL+ +G LY WG +N V
Sbjct: 116 GDFEDRL----VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWG--WNKFGQVGAGD 169
Query: 270 NCPQSLPSSLSFSQ------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
N P + F Q + GW H L +T V G +G L E V P+
Sbjct: 170 NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 229
Query: 324 SVALEKVSNLDGVKVIQIAA 343
LE +S +DG QI +
Sbjct: 230 --ILEALS-VDGCSGQQIES 246
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P K+ +F ++ +A G H+ + +D +++G+G G+ G LG+
Sbjct: 7 GQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTED---GELFGWGWGRYGNLGL 63
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R V PQ + ++V ++ + ++S+ G LYT+G G D
Sbjct: 64 GDRNDRLV--PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDR 121
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + + SQ + GW H + LT DG++ G + G + + + P+ +
Sbjct: 122 LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKF 181
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ KVIQI+ G H+ VT+ + + +WG G +GQLG G + D+ P ++
Sbjct: 182 PQDQ-----KVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMIL 231
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G GQLG G D L P L ++S ++ G H +ALT+ GK++
Sbjct: 102 LYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD-----GKLYG 156
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G+ +D P + F + + IS GW H+ V+D +F+ G GT
Sbjct: 157 WGWNKFGQVGAGDNIDHCSPIQIKFPQDQK--VIQISCGWRHTLAVTDKQNVFSWGRGTN 214
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLGHG+ ++P+ + +
Sbjct: 215 GQLGHGESVDRNTPMILEAL 234
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S+ +K+ +G+ + +AAGAEH+A VTE+ + WGWG +G LGLG+ D++ P+ V+
Sbjct: 17 SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVS 76
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAIS 408
D D + V CG T ++S
Sbjct: 77 SVDG----DKMVMVACGWRHTISVS 97
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 259 WGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
WGR G +T D PQ + + +S A G H +T DGE+ G +G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L +R P +KVS++DG K++ +A G H+ V+ + T+GW ++GQLG
Sbjct: 61 LGLGDRNDRLVP-----QKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGH 115
Query: 371 GNTCDQIHP 379
G+ D++ P
Sbjct: 116 GDFEDRLVP 124
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 176/388 (45%), Gaps = 74/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ S ++ ++ACG H A+T + G ++
Sbjct: 130 EIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVT-----LSGDLY 184
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 185 TWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG--IHVSSISCGPWHTALVTSAGQLFTFG 242
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD S S P +V S + ACG+ H+ +++ GN ++
Sbjct: 243 DGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 302
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 303 FTWGDGDKGRLG----------------------------HGDKEAKLVP---------- 324
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
C +L +F Q A G + LT G V +G + +G L + + P
Sbjct: 325 -------TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQ-ADGMLP 375
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V + N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 376 VRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLV 431
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ Q R V CG FT AI H
Sbjct: 432 EALKDKQVR----SVVCGINFTAAICIH 455
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G +L P + + +ACG +ALT+ G V+
Sbjct: 301 KIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 355
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D + P V +G H+ + IS G H ++ ++T G
Sbjct: 356 TMGSAVYGQLGNTQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 411
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG----SG 208
G G+LGHGD ++P V + +K V + CG+ + + C+ V G SG
Sbjct: 412 GANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGVDQSMCSG 468
Query: 209 KRGQLGVSKDR 219
R + + R
Sbjct: 469 CRQPFNLRRKR 479
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 176/389 (45%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG G+ G LGHG V PK V DG ++ IS G H+ V+ +G LFT
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDG+FG LGHGD S S P +V S + ACG+ H+ +++ +GN +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G +G+LG +GD+ +
Sbjct: 503 IFTWGDGDKGRLG----------------------------HGDKDSRFVP--------- 525
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C +L +F Q A G + LT G V +G + +G L +P+
Sbjct: 526 --------TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLL 575
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V + N V +I+ GA H AV+T + TWG G +G+LG G T D+ P +
Sbjct: 576 PVRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTL 631
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V + Q R V CG FT AI H
Sbjct: 632 VEALKDKQVRS----VVCGINFTAAICIH 656
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G P + + +ACG +ALT+ G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D L P V +G H+ + IS G H ++ ++T G
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
G G+LGHG ++P V + +K V + CG+ + + C+ V G SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669
Query: 209 KRGQLGVSKDR 219
R + + R
Sbjct: 670 CRQPFNLRRKR 680
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 161/341 (47%), Gaps = 35/341 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ P+ L L ++ VS H LA+T+ G+
Sbjct: 422 VKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTA-----EGE 476
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFTC 150
VFSWG G G+LGHG YPK G + +SAG+ HS V++ G L+T
Sbjct: 477 VFSWGDGDYGKLGHGNSATQKYPK---IIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTW 533
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+G FG+LGH D S + P V V Q+ACG H++ + +D G V+ FG G
Sbjct: 534 GEGDFGRLGHSDSHSRNVPTLVKDI--SGVGQVACGSSHTIAVAQD--GRIVWSFGGGDN 589
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNST 266
G+LG V P+V LH I + A S AL++ G ++ WG G S+
Sbjct: 590 GKLG--HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 647
Query: 267 SDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRP 322
+ L LS ++ + G +H L L+ + EV G + G + T+P
Sbjct: 648 ETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKP 707
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KV L+GV + QI AG HS V +R ++ W
Sbjct: 708 -----KKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 743
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 160/368 (43%), Gaps = 63/368 (17%)
Query: 35 KVWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+V+ WG G GQL GT L+P SLS + CG + + G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAP------SLSQTQQVVCGQNCTFLVQA-----NG 3909
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN---HSGFVSDSGCLF 148
V + G GS G+LG G D P ++ G Y +T + + HS ++++G +F
Sbjct: 3910 TVLAVGEGSYGRLGQGNSDDLYTPTIISALQG--YVVTQLVTSYGSDGHSLALTETGEVF 3967
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LGHG+ P ++ + V Q+ACG +HS V+ D +++ FGSG
Sbjct: 3968 SWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTAD---GKLFTFGSG 4024
Query: 209 KRGQLGVSKDRIRSVS---LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G+LG RS S +P+ L D +G G A L
Sbjct: 4025 DSGRLGQ-----RSTSNKMIPERVTAL-DGHHIGQRLIGLPDAMLK-------------- 4064
Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ +P+ + A+G H+L L+ G+V G + L + + P+
Sbjct: 4065 --NHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLG----LGHSNPV 4118
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG-QLGLG-------NTCD 375
+ V+ L G + QI+AG HS+ T A+ T G G QLGL N
Sbjct: 4119 KEPI-LVTTLQGKNIRQISAGRCHSSAWT-TPALSTRASGCSGIQLGLPQSVPPQYNALK 4176
Query: 376 QIHPKVVN 383
P+V+N
Sbjct: 4177 DCSPEVLN 4184
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 32/328 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+ WG SS QL G + L PK F + I AG + VS G + CG
Sbjct: 372 VYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQM----IEAGQYCTFSVSADGAVKACGK 427
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSGK 209
G++G+LG GD + S P K+ + + +++ H+L + + +V+ +G G
Sbjct: 428 GSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAE---GEVFSWGDGD 484
Query: 210 RGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
G+LG + P++ G L +V +SA SAA++ +G LYTWG G
Sbjct: 485 YGKLGHGNSATQKY--PKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLG 542
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM-LGGSHHGMLSDPERVSSTR 321
+ + N P + Q A G +H + + DG ++ GG +G L + R
Sbjct: 543 HSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYR 602
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPK 380
P + + L G + ++ AG++ S +T + WG G LG G++ + P+
Sbjct: 603 P-----KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPR 655
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++ E + +++ CG A+S
Sbjct: 656 LI----EELSITKIIDISCGDSHCLALS 679
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG--------ISANGDRSAALS 251
++VY +G+G+ GQL D S S+P + L + V + ANG A
Sbjct: 3860 SEVYLWGNGRHGQLA---DAGTSASVPTLAPSLSQTQQVVCGQNCTFLVQANGTVLAV-- 3914
Query: 252 AEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN-----HVLVLTGDGEVLMLGGS 306
EG G+G ++ D+ P + + + L + H L LT GEV G
Sbjct: 3915 GEGSYGRLGQG--NSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDG 3972
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
+G L RP +++ L G +V+Q+A G +HSAVVT + + T+G G+ G
Sbjct: 3973 DYGKLGHGNSERQRRP-----KQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSG 4027
Query: 367 QLGLGNTCDQIHPKVVNLGD 386
+LG +T +++ P+ V D
Sbjct: 4028 RLGQRSTSNKMIPERVTALD 4047
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VY +GS QL ++ + + P++ G D ++ I A + ++SA+G + G+
Sbjct: 372 VYVWGSNSSHQL--AEGTLEKILQPKLAQGFSDAQM--IEAGQYCTFSVSADGAVKACGK 427
Query: 262 G------FNSTSDVNCPQSL----PSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGM 310
G +++ + P+ L P ++ ++ G + H L +T +GEV G +G
Sbjct: 428 GSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGK 487
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L + P + L G V+ ++AG HSA VT + + TWG G+ G+LG
Sbjct: 488 LGHGNSATQKYPKIIQ----GPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGH 543
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ + P +V ++ +V CGS T A+++
Sbjct: 544 SDSHSRNVPTLV------KDISGVGQVACGSSHTIAVAQ 576
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 30/314 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V+ +ACG H + +T G++F++G GQLG G + KP T I
Sbjct: 37 VTDIACGDEHTVVVTE-----NGRLFTFGNNEWGQLGIGS--NKTRNKPTTVKALKPEKI 89
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
TH++AG H+ V+DS L++ G G+ G LGHGD + P + S +K+V+ IACG
Sbjct: 90 THVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGY 149
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRS 247
HS + K+ ++Y +GS GQLG+ D ++S P + +G ++ ++ +
Sbjct: 150 HSAAITKN---GELYIWGSNSEGQLGLKND---TISYPTMLDLGK---SVISVACGYYHT 200
Query: 248 AALSAEGHLYTWGR--------GFNSTSDVNCPQSLPS-SLSFSQAALGWNHVLVLTGDG 298
A ++A+G LYT+G G V P+ + S + A G NH + LT G
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASG 260
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+V G +G L ++ + + V L K+ IA G H+AVV++ +
Sbjct: 261 QVYTFGSGQNGQLGLGSKIMDSNIPKL----VEALSKRKIKHIACGESHTAVVSDKGELF 316
Query: 359 TWGWGEHGQLGLGN 372
T+G G HG+LG G+
Sbjct: 317 TFGDGRHGKLGQGD 330
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 153/329 (46%), Gaps = 32/329 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++++G GQLG G P + ++ +A G H LA+T + K++
Sbjct: 55 RLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSN-----KLY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G+GS G LGHG+ D P + + I I+ G HS ++ +G L+ G +
Sbjct: 110 SFGQGSEGALGHGDETDLNMPTSIESLEDKDVNI--IACGGYHSAAITKNGELYIWGSNS 167
Query: 155 FGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG D S+ + + + K+V +ACG H+ V+ D ++Y FG + G+L
Sbjct: 168 EGQLGLKNDTISYPTMLDLG----KSVISVACGYYHTAVVTAD---GKLYTFGETEGGKL 220
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------ST 266
G+ V+ P+V G+ ++V ++ G+ + AL+A G +YT+G G N
Sbjct: 221 GLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKI 279
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST--RP 322
D N P+ + S A G +H V++ GE+ G HG L + S +P
Sbjct: 280 MDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKP 339
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ KV L V+ IA G H+ V
Sbjct: 340 V-----KVQRLKEFIVLHIACGGCHTIVA 363
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
A G H +V+T +G + G + G L + +P +V L K+ +AAG
Sbjct: 41 ACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKA-----LKPEKITHVAAG 95
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
H+ VT++ + ++G G G LG G+ D P + + +++D + + CG +
Sbjct: 96 RFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSI---ESLEDKDVNI-IACGGYHS 151
Query: 405 YAISRH 410
AI+++
Sbjct: 152 AAITKN 157
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV IA G EH+ VVTEN + T+G E GQLG+G+ + P V
Sbjct: 36 KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTV 81
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 176/389 (45%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG G+ G LGHG V PK V DG ++ IS G H+ V+ +G LFT
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDG+FG LGHGD S S P +V S + ACG+ H+ +++ +GN +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G +G+LG +GD+ +
Sbjct: 503 IFTWGDGDKGRLG----------------------------HGDKDSRFVP--------- 525
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C +L +F Q A G + LT G V +G + +G L +P+
Sbjct: 526 --------TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLL 575
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V + N V +I+ GA H AV+T + TWG G +G+LG G T D+ P +
Sbjct: 576 PVRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTL 631
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V + Q R V CG FT AI H
Sbjct: 632 VEALKDKQVRS----VVCGINFTAAICIH 656
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G P + + +ACG +ALT+ G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D L P V +G H+ + IS G H ++ ++T G
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
G G+LGHG ++P V + +K V + CG+ + + C+ V G SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669
Query: 209 KRGQLGVSKDR 219
R + + R
Sbjct: 670 CRQPFNLRRKR 680
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 175/416 (42%), Gaps = 79/416 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ +G + G+LG G + + P + +V+ +A G H+ LT G V +
Sbjct: 41 VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTR-----NGDVLT 95
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA--GWNHSGFVSDSGCLFTCGDG 153
G SGQLGHG PK + R ITHIS+ G + +S G L+TCG
Sbjct: 96 VGFNGSGQLGHGNNKSISTPKKIESLKNIR--ITHISSANGCENLAIISQDGKLYTCGYN 153
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC--LGNQ---VYGFGSG 208
+GQLGHG + S+P V + + V ++C HSL++ +D NQ VY G
Sbjct: 154 NYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRN 213
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
GQLG ++ P++ L+ +++ + S ++ G +++ G G
Sbjct: 214 DNGQLG--QEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLG 271
Query: 263 FNSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS------- 312
N T N P +SL + QAA G+ H LV GE+ G + G L
Sbjct: 272 HNDTKSRNQPVLIESLKNKF-IVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA 330
Query: 313 --DPERVSS-----------------------TRPLSVA----------LEKVSNLDG-- 335
P+++ +P S + L + +NL+
Sbjct: 331 LIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQ 390
Query: 336 ---------VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + +IA G HS + E+ + T+G G HGQLG GNT DQ PK V
Sbjct: 391 PQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQV 446
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 31/341 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS---PSSVIGG 91
K+++ G GQLG G + +P L+ + V+ ++C H L +T +S
Sbjct: 146 KLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQT 205
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+S GR +GQLG + PK + + + + + G +HS FV+ G +F+CG
Sbjct: 206 TVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQ--VIQTACGLHHSVFVTVHGEVFSCG 263
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH D +S + PV + S NK + Q ACG H+LV +D ++Y FG +G
Sbjct: 264 FNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLV-RRDT--GEIYAFGRNDKG 320
Query: 212 QLGVSKD-----------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
QLG+ + +VS Q + G + G N S +L G +
Sbjct: 321 QLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIM--- 377
Query: 261 RGFNSTSDVNCPQS----LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+G ++++N Q L ++ S+ A G H + L G++ G +HG L
Sbjct: 378 QGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNT 437
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
P ++V++L KVI IA G H+ V+ + + +
Sbjct: 438 EDQKLP-----KQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 140/357 (39%), Gaps = 48/357 (13%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q V+S G +GQLG E++P+++ + V ACG H + +T + G
Sbjct: 203 QQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVT-----VHG 257
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VFS G +GQLGH + +PV I + G+ H+ D+G ++ G
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSR--NQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFG 315
Query: 152 DGTFGQLG-HGDYRSHSSPVKVSSFVNK--------NVHQIACGMRHSLVLLKDCLGNQV 202
GQLG + ++ P ++ F+ N +Q+ G H NQ
Sbjct: 316 RNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEH----------NQP 365
Query: 203 YGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ G + G+++ + PQV + I I+ S AL G L+T+G
Sbjct: 366 SSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFG 425
Query: 261 RGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL---MLGGSHHG 309
RG + +T D P+ + S A G+ H +VL +V L
Sbjct: 426 RGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGISQLSTDMKK 485
Query: 310 MLSDPERVSST-----RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
++++P R T RPL + + I S +E R M WG
Sbjct: 486 IINEPSRADVTFIVESRPLHAH----RCILFARCRSIEEKIRQSCRRSEERDKMRWG 538
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 170/375 (45%), Gaps = 30/375 (8%)
Query: 20 AKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGA 77
+P IE ++ + ++ WG G+LG G + DE L P ++ S + +ACG
Sbjct: 33 CEPVIEVQKSLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGEN 92
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
+ + +T GK++S G GQLGH + L + + D + + G H
Sbjct: 93 YTVVITH-----DGKIYSCGNNDYGQLGHEQGRKRL--QLILGLDA--FVFKKAACGAYH 143
Query: 138 SGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
+ V++ G LF+ G + GQLG + SP V + + QIACGM+H+L L +
Sbjct: 144 TIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNN 203
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
++Y +GS GQLG+ D IR P++ L + I I+ G S A+S G +
Sbjct: 204 ---GELYSWGSNSEGQLGLGVD-IRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259
Query: 257 YTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+ WG+ G N T + N P L + + AA G + LT DG V G +
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMY 319
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQ 367
G L + P +V L G V QI+ G H+ A+V + WG G GQ
Sbjct: 320 GQLGHGSNNNEILP-----RQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQ 374
Query: 368 LGLGNTCDQIHPKVV 382
LG +T P+VV
Sbjct: 375 LGNNSTRSTTTPQVV 389
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ ++GQLG G + E+ P+L+N + ++ +ACGG H +A++ G +
Sbjct: 205 ELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISK-----SGAI 259
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG + + P + + + + + G S F++ G +FTCG G
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAK--VCYAACGEEFSVFLTVDGGVFTCGAG 317
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 318 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPS--QGRVYAWGLGGAGQL 375
Query: 214 GVSKDRIRSVSLPQVTIG 231
G + RS + PQV G
Sbjct: 376 G--NNSTRSTTTPQVVRG 391
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 176/389 (45%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG G+ G LGHG V PK V DG ++ IS G H+ V+ +G LFT
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDG+FG LGHGD S S P +V S + ACG+ H+ +++ +GN +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G +G+LG +GD+ +
Sbjct: 503 IFTWGDGDKGRLG----------------------------HGDKDSRFVP--------- 525
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C +L +F Q A G + LT G V +G + +G L +P+
Sbjct: 526 --------TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLL 575
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V + N V +I+ GA H AV+T + TWG G +G+LG G T D+ P +
Sbjct: 576 PVRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTL 631
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V + Q R V CG FT AI H
Sbjct: 632 VEALKDKQVRS----VVCGINFTAAICIH 656
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G P + + +ACG +ALT+ G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D L P V +G H+ + IS G H ++ ++T G
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
G G+LGHG ++P V + +K V + CG+ + + C+ V G SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669
Query: 209 KRGQLGVSKDR 219
R + + R
Sbjct: 670 CRQPFNLRRKR 680
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 2465 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 2519
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 2520 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 2571
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 2572 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2629
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 2630 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 2685
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 2686 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMI 2745
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 2746 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 2800
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 2801 ISAGRCHSAAWT 2812
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 2452 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 2502
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 2503 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2562
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 2563 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 2619
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 2620 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 2678 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 2735
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L G+ + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 2736 ---QQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 2791
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 2446 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 2497
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 2498 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 2554
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 2555 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 2590
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 2591 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 2627
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 2628 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 2682
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 2683 PQKIDVLCGIGIK----KVACGTQFSVALTK 2709
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 1592 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 1646
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 1647 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 1698
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 1699 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 1756
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 1757 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 1812
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 1813 IDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVI 1872
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L +G+V G + G L P V+ L G V Q
Sbjct: 1873 IEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKNVRQ 1927
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 1928 ISAGRCHSAAWT 1939
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 1579 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 1629
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 1630 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1689
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 1690 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 1746
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 1747 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 1805 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 1862
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 1863 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 1918
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 31/276 (11%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++ G G GQL R+ P SF Q+ CG + V+ + V G
Sbjct: 1579 VYLWGAGRHGQLAEAG-RNVMVPAAAPSF--SQAQQVICGQNCTFVIQAN---GTVLACG 1632
Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
G G+LG + D + +++ G ++V + S AL+ G +++WG G
Sbjct: 1633 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1692
Query: 264 ---NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ SD Q P + Q + G+ H V+T DG++ G +G L
Sbjct: 1693 KLGHGNSDR---QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 1749
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNT 373
+ P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+
Sbjct: 1750 NTSNKKLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P+ +++ + +V CG+ F+ A+++
Sbjct: 1805 TAKSSPQKIDVLCGIGIK----KVACGTQFSVALTK 1836
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 178/382 (46%), Gaps = 45/382 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G++FSWG S G+LGHG D
Sbjct: 277 DALLPKALESTVVLDVHGIACGGRHAVLVTRQ-----GEIFSWGEESGGRLGHGVEADVS 331
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
+PK + G + ++ G H+ V+ SG L+T GDGT +G LGHG SH P K
Sbjct: 332 HPKIIDTLSGTNVEL--VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----------VSKDRI 220
VS + V I+CG H+ V+ Q++ FG G G LG + +
Sbjct: 390 VSGQMEGIRVSYISCGAWHTAVVTS---AGQLFTFGDGSFGALGHGDHITSNFPREVETL 446
Query: 221 RSVSLPQVTIGL----HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQS 274
R + +V G+ +E + ++ SA+ S+ LYTWG G N P+
Sbjct: 447 RGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSR-KLYTWGDGDKGRLGHGDNEPRL 505
Query: 275 LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+P ++ Q A G + + LT G V +G + +G L + P V E
Sbjct: 506 VPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEGE 564
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
++ V ++A G+ H AV+T + TWG G +GQLG G+ + P +V++ +
Sbjct: 565 IANSF----VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDK 620
Query: 389 QNRDTQLEVFCGSGFTYAISRH 410
Q ++ V CGS FT I H
Sbjct: 621 QVKN----VACGSKFTVVICIH 638
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 37/340 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P++++ S ++V ++ACG H A+T + G ++
Sbjct: 310 EIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT-----LSGDLY 364
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ V+ +G R +++IS G H+ V+ +G LFT G
Sbjct: 365 TWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIR--VSYISCGAWHTAVVTSAGQLFTFG 422
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC------------LG 199
DG+FG LGHGD+ + + P +V + ++ACG+ H+ ++
Sbjct: 423 DGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSS 482
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
++Y +G G +G+LG + R V P+ L + I ++ D + AL+ G +YT
Sbjct: 483 RKLYTWGDGDKGRLGHGDNEPRLV--PECVAALMEERICQVACGNDLTVALTTAGRVYTM 540
Query: 259 ----WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+G+ ++T++ P + ++ S + A G HV VLT EV G +G L
Sbjct: 541 GSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V + L +V +A G++ + V+
Sbjct: 601 GHGDNNHRNTPTIVDV-----LKDKQVKNVACGSKFTVVI 635
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 126/318 (39%), Gaps = 80/318 (25%)
Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
+DAL PK + D H I+ G H+ V+ G +F+ G+ + G+LGHG
Sbjct: 276 LDALLPKALESTVVLDVH-----GIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S P + + NV +ACG H+ + L +Y +G G + S +P
Sbjct: 331 SHPKIIDTLSGTNVELVACGEYHTCAVT---LSGDLYTWGDGTHNYGLLGHGSEVSHWIP 387
Query: 227 QVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
Q G + I + IS +A +++ G L+T+G G S A
Sbjct: 388 QKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDG-------------------SFGA 428
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LG HG + ++S P +V L G++ ++A G
Sbjct: 429 LG--------------------HG-----DHITSNFP-----REVETLRGLRTTKVACGV 458
Query: 346 EHSAVVTE---------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
H+A E +R + TWG G+ G+LG G+ ++ P+ V E
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALME--- 515
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ +V CG+ T A++
Sbjct: 516 -ERICQVACGNDLTVALT 532
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 178/388 (45%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D P L+ ++++V+ +ACG H A+++ G +F
Sbjct: 281 EVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVST-----SGDLF 335
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK V+ +G + ++ G HS + +G LFT G
Sbjct: 336 TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG--LQVVAVACGTWHSALATSNGKLFTFG 393
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG FG LGHG+ S + P +V ++ACG+ HS +
Sbjct: 394 DGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAI------------------ 435
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
I+++ +S G +++A L+TWG G
Sbjct: 436 -----------------------IDVMDLS--GSKASA----KRLFTWGDGDQYRLGHAN 466
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + C ++ + +F Q A G+ + LT G V +GG+ +G L +P P
Sbjct: 467 KETYLEPTCVAAV-AEYNFHQVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDGKV-P 524
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V L G V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V
Sbjct: 525 ILVR----DKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLV 580
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 581 ---EALKDRHVK-NISCGSTFTSCICLH 604
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 244 GDRSAAL-SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLV 293
GDR AL + +G ++TWG G D P L SL+ + A G H
Sbjct: 269 GDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH-LVESLAITNVTFVACGEYHSCA 327
Query: 294 LTGDGEVLMLGGSHHG--MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
++ G++ G HG +L VS P V+ L+G++V+ +A G HSA+
Sbjct: 328 VSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVS----GPLEGLQVVAVACGTWHSALA 383
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
T N + T+G G G LG GN +PK V L ++ ++V CG + AI
Sbjct: 384 TSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYK----AIKVACGVWHSAAI 435
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 121/228 (53%), Gaps = 12/228 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L P + +V MLA G H A+T GK++
Sbjct: 139 EVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTES-----GKLY 193
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P V G + + ++ GW H+ V++SG L+T G
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL--VACGWRHTIAVANSGNLYTFGWSK 251
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD+ H P +V + NK + ++ G RH++ L +D ++YG+G K GQ+G
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDED---GELYGWGWNKFGQVG 308
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ P++ G+ + ++ ++ + A++ G++Y+WGRG
Sbjct: 309 CGN--TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRG 354
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 157/350 (44%), Gaps = 32/350 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V ++ G +H +AL S G V SWGRG GQLGHG+ + P ++ D I
Sbjct: 16 VISVSAGASHTVALLS-----GDLVCSWGRGEDGQLGHGDAEERHLPLVISALD--DCEI 68
Query: 129 THISAGWNHSGFVSDSG-CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ I+ G +H+ S+S +++ G G FG+LGHG+ P + + QIACG
Sbjct: 69 SSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGD 128
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + D +V+ +G + GQLG+ V +P I + ++A + +
Sbjct: 129 SHCLAITGD---GEVHSWGRNQNGQLGLG--HTEDVLVPNKVAAFEGIAVKMLAAGAEHT 183
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
AA++ G LY WG G +D P + + + A GW H + + G
Sbjct: 184 AAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGN 243
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G S +G L + P +V L + ++ G H+ + E+ +
Sbjct: 244 LYTFGWSKYGQLGHGDFEDHLVP-----HQVQALKNKTIQAVSGGWRHTVALDEDGELYG 298
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAIS 408
WGW + GQ+G GNT D PK++ + +E R V CG T AI+
Sbjct: 299 WGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTR-----VTCGWRHTVAIT 343
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 24/357 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G + P +++ +S + CG H A + + V+S
Sbjct: 35 VCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRT----VYS 90
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P+ + G I I+ G +H ++ G + + G
Sbjct: 91 WGWGDFGRLGHGNSSDLFIPRAIKGLKG--LEIKQIACGDSHCLAITGDGEVHSWGRNQN 148
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P KV++F V +A G H+ + + ++YG+G G+ G LG+
Sbjct: 149 GQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTES---GKLYGWGWGRYGNLGL 205
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R V + + +V + A++ G+LYT+G G D
Sbjct: 206 GDRNDRLVPGEVAAVPGEKMNLVACGWR--HTIAVANSGNLYTFGWSKYGQLGHGDFEDH 263
Query: 270 NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P + + + + A+ GW H + L DGE+ G + G + P
Sbjct: 264 LVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSP----- 318
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ ++ + KV ++ G H+ +T+ + +WG G GQLG G+ D+ PK + L
Sbjct: 319 KLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIEL 375
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 121/241 (50%), Gaps = 25/241 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ V ++ G H++ LL G+ V +G G+ GQLG R LP V L D EI
Sbjct: 14 RRVISVSAGASHTVALLS---GDLVCSWGRGEDGQLGHGDAEERH--LPLVISALDDCEI 68
Query: 238 VGISANGDRSAALSAEGH-LYTWG------RGFNSTSDVNCPQSLP--SSLSFSQAALGW 288
I+ D + A S +Y+WG G ++SD+ P+++ L Q A G
Sbjct: 69 SSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGD 128
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L +TGDGEV G + +G L + T + V KV+ +G+ V +AAGAEH+
Sbjct: 129 SHCLAITGDGEVHSWGRNQNGQLG----LGHTEDVLVP-NKVAAFEGIAVKMLAAGAEHT 183
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
A VTE+ + WGWG +G LGLG+ D++ P +V + E N V CG T A+
Sbjct: 184 AAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNL-----VACGWRHTIAV 238
Query: 408 S 408
+
Sbjct: 239 A 239
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G R + +SAG +H+ + + + G G GQLGHGD P+ +S+ + +
Sbjct: 11 GPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISS 70
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
I CG H+ + VY +G G G+LG + +P+ GL +EI I+
Sbjct: 71 ITCGADHTTARSEST--RTVYSWGWGDFGRLGHGNS--SDLFIPRAIKGLKGLEIKQIAC 126
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVL 294
A++ +G +++WGR G T DV P + + ++ A G H +
Sbjct: 127 GDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAV 186
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G++ G +G L +R P VA + G K+ +A G H+ V +
Sbjct: 187 TESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAA-----VPGEKMNLVACGWRHTIAVANS 241
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ T+GW ++GQLG G+ D + P V
Sbjct: 242 GNLYTFGWSKYGQLGHGDFEDHLVPHQV 269
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG GQ+G G D SP+L+ V+ + CG H +A+T G V+
Sbjct: 295 ELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDR-----GNVY 349
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFF 121
SWGRG+SGQLGHG+ VD PK +
Sbjct: 350 SWGRGTSGQLGHGDAVDRCVPKRIELL 376
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 166/375 (44%), Gaps = 30/375 (8%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAH 78
+P I E + ++ WG+ G+LG G + DE L P+ L+ + + +ACG +
Sbjct: 13 EPVIAVEYPLHKKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENY 72
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
+ +T G+++S G GQLGH + L P + + G H+
Sbjct: 73 TVVITQI-----GEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYHT 123
Query: 139 GFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
+++ G LF+ G T GQLG + SSP V + V QIACGM+H+ L +
Sbjct: 124 LAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNN- 182
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
++Y +GS GQLG+ D + P+ I I I+ G S A+S G ++
Sbjct: 183 --GELYSWGSNSEGQLGLGTDTKYEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVF 239
Query: 258 TWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
WG+ G N T D N P L + + AA G + LT DG V G +G
Sbjct: 240 GWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYG 299
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQL 368
L + P +V L G V QI+ G H+ + +R + WG G GQL
Sbjct: 300 QLGHGSNSNEILP-----RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQL 354
Query: 369 GLGNTCDQIHPKVVN 383
G +T P+VV+
Sbjct: 355 GNHSTRSVTTPQVVH 369
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ ++GQLG G E+ P+ ++ ++ +ACGG H +A++ G V
Sbjct: 184 ELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISK-----SGAV 238
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG + D P + + I + + G S F++ G +FTCG G
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAK--ICYAACGEEFSVFLTVDGGVFTCGAG 296
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 297 MYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 354
Query: 214 GVSKDRIRSVSLPQVTIG 231
G RSV+ PQV G
Sbjct: 355 G--NHSTRSVTTPQVVHG 370
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 175/362 (48%), Gaps = 32/362 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +WG+ G+LG G + +P ++L + ++ +A G AH +ALT+ G V
Sbjct: 55 TILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTA-----AGTVL 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G D+L P V+ G T + ++AG +HS ++ +G + G +
Sbjct: 110 AWGDNSHGQLGDGTGADSLTPVGVSLPAG--VTASAVAAGRDHSVALTSAGTVLAWGGNS 167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S+PV V+ + V +A G HS+ L V +G GQLG
Sbjct: 168 FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTS---AGTVLAWGGNPFGQLG 224
Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------N 264
V + +V+LP T + ++A G+ S AL++ G + WGR F
Sbjct: 225 DGTVVDRSTPVAVALPPST------TVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDG 278
Query: 265 STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ D + P SLP+ ++ S A G H L LT G VL G + G L D +S+ P
Sbjct: 279 TVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDGTTTTSSTP 338
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+SV L + + + A ++HS +T A ++WG GQLG G T + P V
Sbjct: 339 VSVTLPAATTITAIS----ARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTPVDV 394
Query: 383 NL 384
+L
Sbjct: 395 HL 396
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 148/332 (44%), Gaps = 34/332 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG + GQLG G D L+P ++L + + S +A G H +ALTS G V
Sbjct: 107 TVLAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTS-----AGTVL 161
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G +VD P V T+T ++AG HS ++ +G + G
Sbjct: 162 AWGGNSFGQLGDGTVVDRSTPVAVALPP--STTVTAVAAGATHSVALTSAGTVLAWGGNP 219
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S+PV V+ + V +A G HS+ L V +G GQLG
Sbjct: 220 FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTS---AGTVLAWGRNFFGQLG 276
Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
V + VSLP + ++A S AL+ G + WG G
Sbjct: 277 DGTVVDRSTPTVVSLPA------GVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330
Query: 263 FNSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+TS +LP++ + + +A H + +T G L G + G L D + +
Sbjct: 331 TTTTSSTPVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRST 390
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
P+ V L GV V IAAG +HS +T
Sbjct: 391 PVDVHLPT-----GVTVTAIAAGDDHSLALTA 417
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 115/254 (45%), Gaps = 20/254 (7%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
F + S + G FG+LG+G + S+PV VS + IA G HS+ L
Sbjct: 49 FGAASDTILAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTA---A 105
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYT 258
V +G GQLG D + SL V + L + ++A D S AL++ G +
Sbjct: 106 GTVLAWGDNSHGQLG---DGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLA 162
Query: 259 WG------RGFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
WG G + D + P +LP S + + A G H + LT G VL GG+ G
Sbjct: 163 WGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQ 222
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L D V + P++VAL + V +AAG HS +T ++ WG GQLG
Sbjct: 223 LGDGTVVDRSTPVAVALPPST-----TVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGD 277
Query: 371 GNTCDQIHPKVVNL 384
G D+ P VV+L
Sbjct: 278 GTVVDRSTPTVVSL 291
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 176/389 (45%), Gaps = 76/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ + ++ ++ACG H A+T + G ++
Sbjct: 331 EIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVT-----LSGDLY 385
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG G+ G LGHG V PK V DG ++ IS G H+ V+ +G LFT
Sbjct: 386 TWGDGTFKFGLLGHGNDVSHWVPKRV---DGPLEGIHVSSISCGPWHTALVTSAGQLFTF 442
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDG+FG LGHGD S S P +V S + ACG+ H+ +++ +GN +
Sbjct: 443 GDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 502
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G +G+LG +GD+ +
Sbjct: 503 IFTWGDGDKGRLG----------------------------HGDKDSRFVP--------- 525
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C +L +F Q A G + LT G V +G + +G L +P+
Sbjct: 526 --------TCVAALVEP-NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ-ADGLL 575
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V + N V +I+ GA H AV+T + TWG G +G+LG G T D+ P +
Sbjct: 576 PVRVEGKLHKNF----VEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTL 631
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V + Q R V CG FT AI H
Sbjct: 632 VEALKDKQVRS----VVCGINFTAAICIH 656
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G P + + +ACG +ALT+ G V+
Sbjct: 502 KIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 556
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D L P V +G H+ + IS G H ++ ++T G
Sbjct: 557 TMGSAVYGQLGNPQ-ADGLLPVRV---EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSG 208
G G+LGHG ++P V + +K V + CG+ + + C+ V G SG
Sbjct: 613 GANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI---CIHKWVSGSDQSMCSG 669
Query: 209 KRGQLGVSKDR 219
R + + R
Sbjct: 670 CRQPFNLRRKR 680
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 168/350 (48%), Gaps = 40/350 (11%)
Query: 29 EEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
+E++ +++WG+G GQLG G +DE PQ+ + C A T+ +
Sbjct: 9 QEKEGGYLYTWGSGQFGQLGIGTQNDESLPQIAK-----EIDNEICTFTAAGANTTAAIT 63
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDA---LYPKPVT-FFDGHRYTITHISAGWNHSGFVSDS 144
GG ++++G+G S QLGHG+ D + P+ V FDG ++ + S H V++
Sbjct: 64 QGGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDG--LSVVNCSICDGHMAAVTED 121
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++T G GTFG+LGH + P KV ++ACG H+L L D +V+
Sbjct: 122 GSVWTWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDD---GRVFA 177
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---- 260
+G+ K G +GVS R PQ L +I+ ISA + SAALSAE +YTWG
Sbjct: 178 WGNNKTGCVGVSD---RGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNY 234
Query: 261 ---------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
R + + + +++P Q A G H+L L+ GEV G G
Sbjct: 235 GQLGLGQGARYISQPTRIRTLRNVP----IVQIACGQYHMLALSAAGEVYAWGQGLQGQT 290
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
++ ++V + P + K S +V IAAG HSAVV + + T G
Sbjct: 291 ANEKKVDTNIPHVIDALKES-----RVKMIAAGGSHSAVVDDKGRLFTVG 335
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 18/240 (7%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
+ G L+T G G FGQLG G S P N+ A G + + + G
Sbjct: 11 KEGGYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQ---GGV 67
Query: 202 VYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
++ FG G QLG + D V +V + +V S AA++ +G ++TW
Sbjct: 68 LWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTW 127
Query: 260 GRGF-----NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
GRG + + P+ +P + F + A G H L LT DG V G + G +
Sbjct: 128 GRGTFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG 187
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+R + A +++ +L G K+I I+AG E SA ++ + TWG +GQLGLG
Sbjct: 188 VSDRGT------CAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQ 241
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
+V++WGA GQLG G+ +S Q + +L +V + +ACG H+LAL++ G+
Sbjct: 225 EVYTWGADNYGQLGLGQGARYIS-QPTRIRTLRNVPIVQIACGQYHMLALSAA-----GE 278
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG+G GQ + + VD P + R + I+AG +HS V D G LFT G+
Sbjct: 279 VYAWGQGLQGQTANEKKVDTNIPHVIDALKESR--VKMIAAGGSHSAVVDDKGRLFTVGE 336
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 26/192 (13%)
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LY 257
G +Y +GSG+ GQLG+ SLPQ+ + D EI +A G + A +G L+
Sbjct: 13 GGYLYTWGSGQFGQLGIGTQN--DESLPQIAKEI-DNEICTFTAAGANTTAAITQGGVLW 69
Query: 258 TWGRGFNS------TSDVNCPQSLPSS-------LSFSQAALGWNHVLVLTGDGEVLMLG 304
T+G+G ++ T D + Q LP LS ++ H+ +T DG V G
Sbjct: 70 TFGQGDSNQLGHGDTGDCS-NQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWG 128
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
G L E + P EKV LDG++ +++A G H+ +T++ + WG +
Sbjct: 129 RGTFGRLGH-EVHETGIP-----EKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNK 182
Query: 365 HGQLGLGN--TC 374
G +G+ + TC
Sbjct: 183 TGCVGVSDRGTC 194
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ + ++ +ACG H A+T+ G+++
Sbjct: 97 EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ ++ +G I ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FG LGHGD +S S P +V S +ACG+ H+ +
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
+E++ +S+A + G L+TWG G
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ C SL F + A G + + LT G+V +G S +G L + S RP
Sbjct: 284 KEARLKPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN--SDGRP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + S V+QIA G+ H AV+T + TWG G +G+LG G+ D+ P V
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTV 396
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CG+ FT AI H
Sbjct: 397 ---EALRDRAVR-HIACGANFTAAICLH 420
>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 187/405 (46%), Gaps = 60/405 (14%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
GA + GQLG G + D +P+L + + L +V ++A GG H +T G+VF G
Sbjct: 1 GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITG-----DGEVFVCG 55
Query: 98 RGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+ GQLG G + D AL P +T+T+++ GW+ + F++DSG + +CG F
Sbjct: 56 QNHRGQLGLGHLADISALQRCPSL-----THTVTNVTCGWDFTLFLTDSGRVLSCGSNAF 110
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + ++ V+V + V +A G+RH+L + +VY +G RG L
Sbjct: 111 GQLGIGQKPNFTAEVQVVESLKAAVVSVAAGLRHALAVTDS---GRVYQWG---RGLLSQ 164
Query: 216 SKDRIRSVS--------LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
+K + S +P GL ++A L+ +G L+ WG +
Sbjct: 165 AKRTLGPSSVPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQL 224
Query: 268 DVNCPQSLPSSLSFSQAAL----------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
P L S++ ++ L GW H++ T G V G ++G L P
Sbjct: 225 VSRDP-FLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPAPT 283
Query: 318 SSTRPLSVALEKVSNLDG-----VKVI----QIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
S + P S + +NL+ VK + QIA G+EH+ + R +++WGW EHG
Sbjct: 284 SRS-PESRSTTDGANLEAGLPAEVKALQGATQIACGSEHNLAILAGR-LLSWGWNEHGMC 341
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLP 413
G G+ D P++V L + CG+G + A+ C P
Sbjct: 342 GDGSHTDVRQPQLVPA-------LRPLLIGCGAGHSMAV---CAP 376
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ + ++ +ACG H A+T+ G+++
Sbjct: 97 EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ ++ +G I ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FG LGHGD +S S P +V S +ACG+ H+ +
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
+E++ +S+A + G L+TWG G
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ C SL F + A G + + LT G+V +G S +G L + S RP
Sbjct: 284 KEARLKPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN--SDGRP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + S V+QIA G+ H AV+T + TWG G +G+LG G+ D+ P V
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTV 396
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CG+ FT AI H
Sbjct: 397 ---EALRDRAVR-HIACGANFTAAICLH 420
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 76/388 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ + ++ +ACG H A+T+ G+++
Sbjct: 97 EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTT-----GELY 151
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ ++ +G I ++S G H+ ++ G LFT G
Sbjct: 152 TWGDGTHNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFG 209
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG+FG LGHGD +S S P +V S +ACG+ H+ +
Sbjct: 210 DGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHTAAI------------------ 251
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--------- 262
+E++ +S+A + G L+TWG G
Sbjct: 252 -----------------------VEVIVT-----QSSATVSAGKLFTWGDGDKHRLGHGD 283
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ C SL F + A G + + LT G+V +G S +G L + S RP
Sbjct: 284 KEARLKPTCVASL-IDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLN--SDGRP 340
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + S V+QIA G+ H AV+T + TWG G +G+LG G+ D+ P V
Sbjct: 341 CLVEDKIASE----HVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTV 396
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CG+ FT AI H
Sbjct: 397 ---EALRDRAVR-HIACGANFTAAICLH 420
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 1623 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 1677
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 1678 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 1729
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 1730 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 1787
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S PQ
Sbjct: 1788 PERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS--PQK 1843
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--SSLS 280
L I I ++ S AL+ +GH+YT+G+ + N PQ +P + +
Sbjct: 1844 VDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVV 1903
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L L G+V G + G L P V + L G V Q
Sbjct: 1904 IEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKNVRQ 1958
Query: 341 IAAGAEHSAVVT 352
I+AG HSA T
Sbjct: 1959 ISAGRCHSAAWT 1970
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 1610 VYLWGAGRHGQLAEAGR--NVMVPAAA--PSFSQAQQVICGQNCTFVIQA-----NGTVL 1660
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 1661 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1720
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 1721 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 1777
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 1778 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 1836 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 1893
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 1894 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 1950
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 1758
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 1759 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 1813
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 168/379 (44%), Gaps = 41/379 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG +GQLG G L P + + LS V + G +H LAL S G V+
Sbjct: 106 TVWAWGDNPNGQLGEGTTTRRLVP--VQVQGLSEVVAVTAGSSHSLALRSD-----GTVW 158
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G + L P PV + + AG +HS + G ++ G
Sbjct: 159 AWGANASGQLGEGTTTNRLVPVPVLGLS----EVVAVEAGSSHSLALRSDGTVWAWGANA 214
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G PV+V S V + G +SL + D V+ +G GQLG
Sbjct: 215 SGQLGDGTTTKRLVPVQVLS----GVVAMEAGSGYSLAVRND---GTVWAWGYNFSGQLG 267
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
D + S S P +GL E+V ++A S AL ++G ++ WG RG +TS+
Sbjct: 268 --DDTVTSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSN 323
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P A G+ H L + DG V G + G L + + + P+
Sbjct: 324 RAFPVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPV----- 378
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
+V L GV + ++AGA S + + + WG GQLG G T D++ P +
Sbjct: 379 QVQGLSGV--VAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPV------QV 430
Query: 389 QNRDTQLEVFCGSGFTYAI 407
Q + V G+ F+ A+
Sbjct: 431 QGLSGVVAVVAGTSFSLAV 449
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 152/351 (43%), Gaps = 35/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+ G GQLG G + +P + + LS V A G H LAL + G V+
Sbjct: 6 TVWAAGNNGSGQLGDGTRDNRSTP--VQVLGLSEVVAAAAGSIHSLALRND-----GTVW 58
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG+G + P V G + AG HS V D G ++ GD
Sbjct: 59 AWGYNGYGQLGNGSLGSRAEPVQVQGLSGG----VSVDAGHYHSLAVRDDGTVWAWGDNP 114
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G PV+V V + G HSL L D V+ +G+ GQLG
Sbjct: 115 NGQLGEGTTTRRLVPVQVQGL--SEVVAVTAGSSHSLALRSD---GTVWAWGANASGQLG 169
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R V +P +GL E+V + A S AL ++G ++ WG G +T+
Sbjct: 170 EGTTTNRLVPVP--VLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S + +A G + L + DG V G + G L D S + P+ V
Sbjct: 226 RLVPVQVLSGVVAMEAGSG--YSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQV--- 280
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L +V+ +AAG+ S + + + WG ++GQ G G T ++ P
Sbjct: 281 ----LGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAFP 327
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 157/356 (44%), Gaps = 43/356 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
VW+WG GQLG + +P Q+L LS + +V A G + LAL S G V
Sbjct: 254 TVWAWGYNFSGQLGDDTVTSRSTPVQVLGLSEVVAV---AAGSSLSLALRSD-----GTV 305
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG GQ G G + +P G ++AG+ HS V G ++ G
Sbjct: 306 WAWGSNDYGQRGEGTTSNRAFPVQARGLSGG----VAVAAGYAHSLAVRSDGTVWAWGSN 361
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + S PV+V V ++ G SL + D V+ +GS GQL
Sbjct: 362 ASGQLGEGTTSNRSEPVQVQGL--SGVVAVSAGASSSLAIRSD---GTVWAWGSNASGQL 416
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
G + DR+ +P GL + V + A S A+ +G + WG G+N +
Sbjct: 417 GDGTTTDRL----VPVQVQGLSGV--VAVVAGTSFSLAVRNDGTV--WGWGYNGYGQLGT 468
Query: 272 PQSL----PSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
SL P ++ A G H L + DG V LG + +G L D + + P+
Sbjct: 469 FTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPV 528
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V+ L GV + +AAG HS V + ++ WG+ GQLG G+ + P
Sbjct: 529 -----QVTGLSGV--VSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAP 577
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 154/345 (44%), Gaps = 36/345 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG G + P + + LS V ++ G + LA+ S G V+
Sbjct: 354 TVWAWGSNASGQLGEGTTSNRSEP--VQVQGLSGVVAVSAGASSSLAIRSD-----GTVW 406
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G D L P V G + + AG + S V + G ++ G
Sbjct: 407 AWGSNASGQLGDGTTTDRLVPVQVQGLSG----VVAVVAGTSFSLAVRNDGTVWGWGYNG 462
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG PV+V+ V +A G HSL + D V+ G GQLG
Sbjct: 463 YGQLGTFTSLFVLVPVQVTGL--SGVVAVAAGNLHSLAVRSD---GTVWALGRNDNGQLG 517
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----- 269
RS + QVT GL + V ++A S A+ +G ++ WG +NS +
Sbjct: 518 DGSWTNRSAPV-QVT-GLSGV--VSVAAGDSHSLAVRYDGSVWAWG--YNSFGQLGDGSW 571
Query: 270 ---NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ P + A ++ + + DG V G + +G L D SS + + V
Sbjct: 572 FQRSAPVQVTGLSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGT-TSSNQLVPV- 629
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+V L GV +++ G+ HS + + + TWG+ GQLG G
Sbjct: 630 --QVQQLRGVVAVEV--GSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 151/352 (42%), Gaps = 34/352 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQ G G + P + LS +A G AH LA+ S G V+
Sbjct: 304 TVWAWGSNDYGQRGEGTTSNRAFP--VQARGLSGGVAVAAGYAHSLAVRSD-----GTVW 356
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G + P V G + +SAG + S + G ++ G
Sbjct: 357 AWGSNASGQLGEGTTSNRSEPVQVQGLSG----VVAVSAGASSSLAIRSDGTVWAWGSNA 412
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G PV+V V + G SL + D V+G+G GQLG
Sbjct: 413 SGQLGDGTTTDRLVPVQVQGL--SGVVAVVAGTSFSLAVRND---GTVWGWGYNGYGQLG 467
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
V +P GL + V ++A S A+ ++G ++ GR N S ++
Sbjct: 468 TFTSLF--VLVPVQVTGLSGV--VAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTN 523
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P + A G +H L + DG V G + G L D + P+
Sbjct: 524 RSAPVQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPV----- 578
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHP 379
+V+ L G +AA +++S V + + WG+ +GQLG G T +Q+ P
Sbjct: 579 QVTGLSGRG--SVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVP 628
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 157/395 (39%), Gaps = 73/395 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WGA GQLG G + L P + + LS V + G +H LAL S G V+
Sbjct: 156 TVWAWGANASGQLGEGTTTNRLVP--VPVLGLSEVVAVEAGSSHSLALRSD-----GTVW 208
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV-----TFFDGHRYTI------THISAGWNHSGFVSD 143
+WG +SGQLG G L P V G Y++ T + G+N SG + D
Sbjct: 209 AWGANASGQLGDGTTTKRLVPVQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGD 268
Query: 144 S---------------------------------GCLFTCGDGTFGQLGHGDYRSHSSPV 170
G ++ G +GQ G G + + PV
Sbjct: 269 DTVTSRSTPVQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAFPV 328
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+ +A G HSL + D V+ +GS GQLG RS P
Sbjct: 329 QARGLSGG--VAVAAGYAHSLAVRSD---GTVWAWGSNASGQLGEGTTSNRS--EPVQVQ 381
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA 284
GL + V +SA S A+ ++G ++ WG G +T+D P +
Sbjct: 382 GLSGV--VAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSGVVAV 439
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
G + L + DG V G + +G L + P+ +V+ L GV + +AAG
Sbjct: 440 VAGTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPV-----QVTGLSGV--VAVAAG 492
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
HS V + + G ++GQLG G+ ++ P
Sbjct: 493 NLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAP 527
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 112/269 (41%), Gaps = 30/269 (11%)
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++ G+ GQLG G + S+PV+V V A G HSL L D V+
Sbjct: 5 GTVWAAGNNGSGQLGDGTRDNRSTPVQVLGL--SEVVAAAAGSIHSLALRND---GTVWA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G GQLG + S + P GL V + A S A+ +G ++ WG N
Sbjct: 60 WGYNGYGQLG--NGSLGSRAEPVQVQGLSG--GVSVDAGHYHSLAVRDDGTVWAWGDNPN 115
Query: 265 ------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+T+ P + G +H L L DG V G + G L E +
Sbjct: 116 GQLGEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLG--EGTT 173
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ R + V + +S +V+ + AG+ HS + + + WG GQLG G T ++
Sbjct: 174 TNRLVPVPVLGLS-----EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLV 228
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
P V G + + GSG++ A+
Sbjct: 229 PVQVLSG--------VVAMEAGSGYSLAV 249
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 164/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG G+LG G + DE L P ++ S + +ACG + + +T GK+
Sbjct: 33 MFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITH-----DGKI 87
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+S G GQLGH L + + D + ++ G H+ V++ G LF+ G
Sbjct: 88 YSCGNNDYGQLGHERGRKRL--QLILGLDA--FVFKKVACGAYHTIAVNEWGQLFSWGSN 143
Query: 154 TFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG + SP V + + Q+ACGM+H+L L + ++Y +GS GQ
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNN---GELYSWGSNSEGQ 200
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ D IRS P++ L + I I+ G S A+S G ++ WG+ G N T
Sbjct: 201 LGLGVD-IRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDT 259
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ N P L + + AA G + LT DG V G +G L + P
Sbjct: 260 QNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILP-- 317
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V L G V QI+ G H+ A+V + WG G GQLG +T P+VV
Sbjct: 318 ---RQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ ++GQLG G + E+ P+L+N + ++ +ACGG H +A++ G +
Sbjct: 189 ELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK-----SGAI 243
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG + + P + + I + + G S F++ G +FTCG G
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAK--ICYAACGEEFSVFLTVDGGVFTCGAG 301
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 302 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPS--QGRVYAWGLGGAGQL 359
Query: 214 GVSKDRIRSVSLPQVTIG 231
G + RS+ PQV G
Sbjct: 360 G--NNSTRSIPTPQVVHG 375
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 124/248 (50%), Gaps = 21/248 (8%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ ++GQLG + E SP+++ S + +ACG H LALT+ G++
Sbjct: 136 QLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTN-----NGEL 190
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+SWG S GQLG G ++ + PK + G I I+ G HS +S SG +F G
Sbjct: 191 YSWGSNSEGQLGLGVDIRSEVKPKLINTLAG--VPIAFIACGGYHSIAISKSGAIFGWGK 248
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
TFGQLG D ++ + P ++ + N + ACG S+ L D V+ G+G GQ
Sbjct: 249 NTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVD---GGVFTCGAGMYGQ 305
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG------RGFNS 265
LG + + LP+ + L + IS + AL ++G +Y WG G NS
Sbjct: 306 LGHGSN--NNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNS 363
Query: 266 TSDVNCPQ 273
T + PQ
Sbjct: 364 TRSIPTPQ 371
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
G +F G+ G+LG G P +V + QIACG +++V+ D +
Sbjct: 30 KGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHD---GK 86
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+Y G+ GQLG + R R Q+ +GL ++ + A++ G L++WG
Sbjct: 87 IYSCGNNDYGQLGHERGRKRL----QLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGS 142
Query: 262 ------GFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G NS + + C + +L S Q A G H L LT +GE+ G + G L
Sbjct: 143 NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ S V + ++ L GV + IA G HS ++++ AI WG GQLGL +
Sbjct: 203 LGVDIRS----EVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND 258
Query: 373 TCDQIHP 379
T ++ P
Sbjct: 259 TQNRNLP 265
>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oryzias latipes]
Length = 397
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 176/395 (44%), Gaps = 52/395 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFS 95
+WGA + GQLG G D+L P+L +S L + + ++ GG H +T GG+VF
Sbjct: 12 TWGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITE-----GGEVFV 66
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+ GQLG G D + F+ +T ++ GW+ S +++ G L CG F
Sbjct: 67 CGQNHKGQLGIGHCADIATFQICPIFN---QRVTDVACGWDFSLLLTEGGRLLACGSNAF 123
Query: 156 GQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ +H + P+ V ++ + +A G+RHSL + VY +G+G +
Sbjct: 124 GQLGVGETVTHIADPLLVEVRFHEPIVSVAAGLRHSLAVNDS---GCVYQWGNGLFSHVD 180
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS---TSDVNC 271
+ R L Q + V + A L+ EG L+ WG + TS+
Sbjct: 181 DKEMRTGDKCLSQK-------KSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTSESFL 233
Query: 272 PQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P P S S GW+H++ T G V G +G L P S T P +
Sbjct: 234 PSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDSQT-PEEL 292
Query: 326 ALEKVSNLDGVKVI-------------QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++ + + QI+ G+EH+ V +R +++WGW EHG G G
Sbjct: 293 LAGFITGTSQSRAVCCPAEVHVLRGATQISCGSEHNLAVVGDR-LLSWGWNEHGMCGNGF 351
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ +HP +++ N L V CG+G + A+
Sbjct: 352 QTNVLHPGLIS------NLRAVL-VGCGAGHSMAV 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 112/288 (38%), Gaps = 66/288 (22%)
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSP------------------------------------ 169
CL T G ++GQLG G P
Sbjct: 9 CLHTWGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCG 68
Query: 170 -----------------VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
++ N+ V +ACG SL+L + G ++ GS GQ
Sbjct: 69 QNHKGQLGIGHCADIATFQICPIFNQRVTDVACGWDFSLLLTE---GGRLLACGSNAFGQ 125
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LGV + V + H+ IV ++A S A++ G +Y WG G S D
Sbjct: 126 LGVGETVTHIADPLLVEVRFHE-PIVSVAAGLRHSLAVNDSGCVYQWGNGLFSHVDDKEM 184
Query: 273 QSLPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALE 328
++ LS ++ L G H + LT +GE+ + G + H L E + S PL +L
Sbjct: 185 RTGDKCLSQKKSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTSESFLPSPTPLRRSL- 243
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
L+G KV + +G H TE+ + TWG G++GQLG N+ Q
Sbjct: 244 ----LNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDSQ 287
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 139/271 (51%), Gaps = 24/271 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCLFTC 150
VFSWGRG GQLG G+ D P T+ D R ITH++ G H+ V+ +G L+T
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEP---TYVDALRGVGIITHVTCGSYHTAAVASNGDLYTW 57
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL-KDCLGNQVYGFGSGK 209
G G +G+LGHG+ HS+P +V + V ++ IACG RH+ V+ K CL Y +G +
Sbjct: 58 GGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCL----YTWGDKE 113
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNS 265
G G D P++ L+ ++V +SA G +A L+ + + WG G +
Sbjct: 114 NGVAG-HGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGN 172
Query: 266 TSDVNC--PQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++ NC P+ + S + Q A G H V+T DG++ GG HG L ++V+ +
Sbjct: 173 GTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLK 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P V LDGV V QI G HS +T
Sbjct: 233 P-----TLVEALDGVVVKQITCGWSHSVALT 258
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+SWG G DGQLG G D+ P ++ L + ++ + CG H A+ S G ++
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVAS-----NGDLY 55
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G+LGHG P+ V G +I I+ G H+ V+ GCL+T GD
Sbjct: 56 TWGGGMYGKLGHGNESGHSTPRRVEALVG--LSIVDIACGSRHTAVVTSKGCLYTWGDKE 113
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN-KNVHQI-ACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G GHGD H K+ +N K V Q+ ACG H+ L D ++ + +G GK G+
Sbjct: 114 NGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGF-HTACLTDD---HETFAWGEGKFGR 169
Query: 213 LGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTS 267
LG +R S L + IG + + ++ G SA ++ +G +YT+G G
Sbjct: 170 LGNGTERNCHSPRLIESLIGKYPCQ---VACGGFHSAVITRDGKMYTFGGGEHGQLGHAD 226
Query: 268 DVN-CPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLML 303
VN +L +L Q GW+H + LT +GE ++
Sbjct: 227 KVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHLV 266
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 22/251 (8%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV-HQIACGMRHSLVLLKDCLGNQVYGF 205
+F+ G G GQLG GD P V + + + CG H+ + + +Y +
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASN---GDLYTW 57
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G G G+LG + S P+ L + IV I+ +A ++++G LYTWG N
Sbjct: 58 GGGMYGKLGHGNESGHST--PRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENG 115
Query: 266 TS---DVNCPQSLPSSLS-------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ D Q P L +A G+ H LT D E G G L +
Sbjct: 116 VAGHGDTEGHQYTPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGT 174
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ P + +L G Q+A G HSAV+T + + T+G GEHGQLG + +
Sbjct: 175 ERNCHSP-----RLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVN 229
Query: 376 QIHPKVVNLGD 386
++ P +V D
Sbjct: 230 KLKPTLVEALD 240
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ ++WG G G+LG G + SP+L+ +ACGG H +T GK++
Sbjct: 158 ETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRD-----GKMY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++G G GQLGH + V+ L P V DG + I+ GW+HS ++ G
Sbjct: 213 TFGGGEHGQLGHADKVNKLKPTLVEALDG--VVVKQITCGWSHSVALTSEG 261
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 166/379 (43%), Gaps = 36/379 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D P + + L V ++ G H LAL G V+
Sbjct: 63 VWAWGYNGFGQLGNGTYKDSCIP--VRVKGLKDVVAVSAGTFHSLALKKD-----GSVWI 115
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQ D P V I I+AGW+ S V G ++ G
Sbjct: 116 WGHTNYGQRKSDVYRDFTTPVKVKELK----NIVAIAAGWDFSLAVGSDGSVWAWGINNH 171
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G + + PVKV K+V ++ G+ HSL L +D V+ +G + G+LG
Sbjct: 172 GELGIGSLKPSAVPVKVKGL--KDVVAVSAGLYHSLALKRD---GTVWSWGYNEDGELGN 226
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
+VS+P GL D+ + ISA G S AL+ +G ++ WG G + +
Sbjct: 227 RPTEDYTVSVPVRVKGLSDV--IAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYI 284
Query: 276 PSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P + + A G+ H + L DG V + G + +G+L S P+ V
Sbjct: 285 PVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQV------ 338
Query: 332 NLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
G+K V+ +AAG HS +T+N I WG GQLG N + NL + +
Sbjct: 339 --KGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSL-----NLPYKVKW 391
Query: 391 RDTQLEVFCGSGFTYAISR 409
D + + G T AI R
Sbjct: 392 LDNVVAIAAGGSHTLAIKR 410
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 151/335 (45%), Gaps = 39/335 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG DG+LG D + + LS V ++ GG H +AL G V+
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKD-----GAVWI 267
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G + +G++ ++ P + + + + I+AG+ HS + D G ++ G ++
Sbjct: 268 WGGGIIEK--NGKIDNSYIPVRIRWLN----KVVAIAAGYRHSIALKDDGTVWVWGHNSY 321
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LG PV+V KNV +A G HS+ L K+ ++ +G+ GQLG
Sbjct: 322 GVLGSNVGEHSFLPVQVKGL--KNVVAVAAGRLHSVALTKN---GTIWAWGNNAFGQLGR 376
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FNST 266
+ S++LP L + +V I+A G + A+ +G +++WG + S+
Sbjct: 377 ENNSF-SLNLPYKVKWLDN--VVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSS 433
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
C + L ++ + H L + DG V + G + S+ PL +
Sbjct: 434 YIPTCVKGLNKAVLVEAGS---QHSLAVDKDGTVWVW-GFIESVWSEKNTKDILSPLPIK 489
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
+ K+++ + +IA G ++ V+ ++ I WG
Sbjct: 490 IGKLND-----ITEIAGGLDYILVLRKDGNI--WG 517
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 158/354 (44%), Gaps = 39/354 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG + G LG+ P + + L +V +A G H +ALT G +++
Sbjct: 313 VWVWGHNSYGVLGSNVGEHSFLP--VQVKGLKNVVAVAAGRLHSVALTK-----NGTIWA 365
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG + GQLG +L P V + D + I+AG +H+ + G +++ G
Sbjct: 366 WGNNAFGQLGRENNSFSLNLPYKVKWLD----NVVAIAAGGSHTLAIKRDGTVWSWGANN 421
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG+G Y+S P V NK V + G +HSL + KD V+GF +
Sbjct: 422 KGQLGNGTYKSSYIPTCVKGL-NKAV-LVEAGSQHSLAVDKDGT-VWVWGFIESVWSEKN 478
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTS 267
+KD + LP L+DI I+ D L +G+++ G F +S S
Sbjct: 479 -TKDILSP--LPIKIGKLNDI--TEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVS 533
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SSTRPLSV 325
V L + + A G+ H L + DG V G ++ L + E+ S +P+
Sbjct: 534 SVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTN---LDNKEKYLNFSEKPV-- 588
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
K+ L GV +++AAG HS + ++ + +WG+ +GQLG G P
Sbjct: 589 ---KIKGLSGV--VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVP 637
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 154/346 (44%), Gaps = 37/346 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLG R ++ S L + L +V +A GG+H LA+ G V+
Sbjct: 363 IWAWGNNAFGQLG--RENNSFSLNLPYKVKWLDNVVAIAAGGSHTLAIKRD-----GTVW 415
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--D 152
SWG + GQLG+G + P V + + AG HS V G ++ G +
Sbjct: 416 SWGANNKGQLGNGTYKSSYIPTCVKGLN----KAVLVEAGSQHSLAVDKDGTVWVWGFIE 471
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ + D S P+K+ ++ +IA G+ + LVL KD GN ++G G+
Sbjct: 472 SVWSEKNTKDILS-PLPIKIGKL--NDITEIAGGLDYILVLRKD--GN-IWGCGN----D 521
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIV-GISANGDRSAALSAEGHLYTWGRGF--NSTSDV 269
K SVS I L +I+ V I+A S A+ +G +++WG N +
Sbjct: 522 FYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYL 581
Query: 270 NC---PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
N P + + A G H L L DG V G + +G L + R +S P+
Sbjct: 582 NFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--- 638
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+V L+ V+ IAAG HS + ++ + WG GQLG N
Sbjct: 639 --RVKGLN--NVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRN 680
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 139/336 (41%), Gaps = 40/336 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWGA GQLG G P + L+ ++ G H LA+ G V+
Sbjct: 414 VWSWGANNKGQLGNGTYKSSYIPTCV--KGLNKAVLVEAGSQHSLAVDKD-----GTVWV 466
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-DGT 154
WG S D L P P+ G IT I+ G ++ + G ++ CG D
Sbjct: 467 WGFIES-VWSEKNTKDILSPLPIKI--GKLNDITEIAGGLDYILVLRKDGNIWGCGNDFY 523
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
F + S + +++ + KNV IA G HSL + D V+ +G
Sbjct: 524 FRKFTDSSVSSVTKLIRLDNI--KNVRSIAAGYFHSLAVRTD---GTVWSWGDTNLD--- 575
Query: 215 VSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNS 265
+K++ + S V I GL + V ++A S AL +G +++WG G
Sbjct: 576 -NKEKYLNFSEKPVKIKGLSGV--VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRE 632
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
TS V P + + A G H + L DG V + G + G L ST PL V
Sbjct: 633 TSFV--PVRVKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKV 690
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
EK+ N V+ IAAG HS + ++ + WG
Sbjct: 691 --EKLDN-----VVAIAAGDTHSVALKKDGTVWVWG 719
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
G + + AG H+ + D G ++ G FGQLG+G Y+ PV+V K+V
Sbjct: 37 LQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGL--KDV 94
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
++ G HSL L KD V+ +G GQ D R + P L + IV I
Sbjct: 95 VAVSAGTFHSLALKKD---GSVWIWGHTNYGQR--KSDVYRDFTTPVKVKELKN--IVAI 147
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+A D S A+ ++G ++ WG G S P + + G H L L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
DG V G + G L + T + V ++ +S+ VI I+AG HS + ++
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-----VIAISAGGFHSIALNKD 262
Query: 355 RAIMTWG 361
A+ WG
Sbjct: 263 GAVWIWG 269
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 164/360 (45%), Gaps = 30/360 (8%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
++WG +DGQLG G +P + L + ++++ + GG H LALTS G V +W
Sbjct: 59 FAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTST-----GAVLAW 113
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GR SGQLG+G+ + P V G TIT I+AG HS ++ +G + G+ G
Sbjct: 114 GRNFSGQLGNGDTTNRSTPVDVDLPAG--TTITAIAAGAFHSLALTSAGTVLAWGENLHG 171
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-- 214
QLG+G + S+PV VS + +A G HSL + V +G GQLG
Sbjct: 172 QLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTST---GAVLAWGDNSNGQLGNG 228
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
V LP G + A S AL++ G WG G T
Sbjct: 229 TTTGSSTPVDVDLPA---GTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDT 285
Query: 267 SDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
++ + P LP+ ++ + A G H L LT G V+ G + G L + S+ P+
Sbjct: 286 TNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVD 345
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L G + IAAG + +T A++ WG GQLG G+T ++ P V+L
Sbjct: 346 VDLPT-----GATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDL 400
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 151/329 (45%), Gaps = 36/329 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG GQLG G + +P ++L + ++++ +A G H LALTS G V
Sbjct: 109 AVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTS-----AGTVL 163
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG+G + P V+ G TIT ++AG HS V+ +G + GD +
Sbjct: 164 AWGENLHGQLGNGGTTNMSTPVGVSLPAG--VTITAVAAGAFHSLAVTSTGAVLAWGDNS 221
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNV---HQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG+G S+PV V + G HSL L +G+ G
Sbjct: 222 NGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTST---GAALAWGNNADG 278
Query: 212 QLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
QLG RS V LP + I ++A G S AL+A G + WGR
Sbjct: 279 QLGNGDTTNRSTPVDVDLPA------GVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQL 332
Query: 262 GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G +T+ + P LP+ + + A G++ L LT G V+ G + G L + + ++
Sbjct: 333 GNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINR 392
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ P+ V L GV + +AAG +HS
Sbjct: 393 STPVDVDLPA-----GVTITAVAAGGQHS 416
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG DGQLG G + +P ++L + +++ +A GG H LALT+ G V +WG
Sbjct: 271 AWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTA-----AGAVVAWG 325
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
R SGQLG+G + P V G TI I+AG++ ++ +G + G GQ
Sbjct: 326 RNVSGQLGNGTTTGSSTPVDVDLPTG--ATINAIAAGFDFGLALTTAGAVVAWGRNVSGQ 383
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
LG+GD + S+PV V + +A G +HS+ L+
Sbjct: 384 LGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVA 421
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 170/361 (47%), Gaps = 31/361 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ V+ WG+ G+L + L P L+ S+ V + CG L + G V
Sbjct: 288 ITVYVWGSNIHGELPGLQGKTCLQPNLV--STFKQVREIVCGQNCTFLLQT-----NGSV 340
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA---GWNHSGFVSDSGCLFTC 150
F+ G G+ G+LG G D P+T G Y I ++ G H+ V+DSG +F+
Sbjct: 341 FACGEGTYGRLGQGTSDDEHSLVPITELQG--YCIIQLATSLGGDGHTLAVADSGEVFSW 398
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LGHG+ P ++ + ++V Q +CG +HS VL KD +V+ FG G+
Sbjct: 399 GDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKD---GKVFTFGQGQY 455
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG-HLYTWGR------GF 263
G LG + + PQ+ + L + I I+ D + AL+ G LY WG G
Sbjct: 456 GILGDGGNSPQKT--PQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGL 513
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
STS + P + S ++ + A G +VL +G + G +++ + + +T
Sbjct: 514 GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTI 573
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P + VS+L +I IA G + + + I WG E GQLG+G T P++
Sbjct: 574 P-----QIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPHYLPQL 628
Query: 382 V 382
V
Sbjct: 629 V 629
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 28/291 (9%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
T+ W S ++ ++ G G+L ++ P VS+F K V +I CG
Sbjct: 275 FTNFPKDWEISAPIT----VYVWGSNIHGELPGLQGKTCLQPNLVSTF--KQVREIVCGQ 328
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-R 246
+ +L + V+ G G G+LG +P + + I + S GD
Sbjct: 329 NCTFLLQTN---GSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGH 385
Query: 247 SAALSAEGHLYTWGRGF-------NSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDG 298
+ A++ G +++WG G NS Q + + QA+ G+ H VLT DG
Sbjct: 386 TLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDG 445
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAI 357
+V G +G+L D P + + +L + QIA G +H+ + N + +
Sbjct: 446 KVFTFGQGQYGILGDGGNSPQKTP-----QLILSLKNEHISQIACGKDHTLALANNGKKL 500
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
WG GE G+LGLG+T + P NL D ++N + ++ CGS F+ ++
Sbjct: 501 YAWGDGEFGKLGLGSTSVRSIP---NLVDSYRNVCLK-KIACGSKFSIVLA 547
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G P L++ + +ACG + L + G ++
Sbjct: 499 KLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLAT-----NGYLY 553
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G + +++D P+ V+ H I I+ G N+ + +SG ++ G
Sbjct: 554 TFGHKDFLGIAETDLLDNTIPQIVSSLMPH--PIIDIAVGCNYILALDNSGNIWGWGTNE 611
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
GQLG G H P V +F N+ +++ G H
Sbjct: 612 EGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTH 646
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 27/325 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
KV++ G T+G+LG G +S P+ + S + +A GG H LALT+ G
Sbjct: 3517 KVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTT-----DG 3571
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH + P+ + R + I+ G +HS ++ +G L+T G
Sbjct: 3572 KVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKR--VRDIACGSSHSAAITSNGDLYTWG 3629
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +G+LGHGD + P +V + ++ V Q+ACG R + L G +VY +G G G
Sbjct: 3630 LGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEG-KVYSWGDGDFG 3688
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
+LG + ++P L D ++ I S AL+ G ++TWG+ G +
Sbjct: 3689 KLG--RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3746
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ V PQ + A+G H L +T G+V G + HG + + +P
Sbjct: 3747 DAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPA 3806
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHS 348
V LE G K+ ++A G+ HS
Sbjct: 3807 LVVLE------GYKISKVACGSSHS 3825
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 12/228 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P L+ S V+ + CG ++ +ALTS G+V+
Sbjct: 639 EVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS-----NGEVY 693
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG+G+ G+LGHG D P + FF GHR +G + V+DSG +++ GDG
Sbjct: 694 SWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGD 753
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G +P + + ++V ++ CG + S+ L K VY +G G +LG
Sbjct: 754 YGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTK---SGAVYTWGKGDNYRLG 810
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++D R P+ L ++ I+ A++ +G LY WGR
Sbjct: 811 HGTEDHARH---PKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGR 855
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 134/293 (45%), Gaps = 27/293 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL++ G+V+SWG G G+LGHG P+ + G + I+AG
Sbjct: 4556 GGKHCLALSAE-----GEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKE--VVDIAAG 4608
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L+T G G +G+LGHGD P V + + V +ACG +L
Sbjct: 4609 GAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLC 4668
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P L ++ + S AL+
Sbjct: 4669 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTK 4723
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + + A G H + T GEV G
Sbjct: 4724 SGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWG 4783
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
+ G L D + RP VA +L G K+ ++A G+ HS + N+A+
Sbjct: 4784 DNDEGQLGDGTTNAIQRPRLVA-----SLLGKKINRVACGSAHSLAWSTNKAV 4831
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 27/308 (8%)
Query: 53 HDELSPQLLNLSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
+ LSP L L+ ++ G H + LTS G+VFSWG G G+LGHG+
Sbjct: 601 YTSLSPTLQQLNGFGDREVIRIASHPDGKHYMGLTS-----DGEVFSWGNGDGGKLGHGD 655
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
+ P +T G + + I G ++S ++ +G +++ G G FG+LGHG ++
Sbjct: 656 YQNHEEPALITGLSGKQ--VAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTT 713
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P+ + F + +ACG + L G VY +G G G+LG + P+V
Sbjct: 714 PMLLKFFKGHRIVDVACGSGDAQTLAVTDSG-AVYSWGDGDYGKLGRGGN--DGCKTPKV 770
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLS 280
L ++V + S AL+ G +YTWG+G N + P+ + SS
Sbjct: 771 IEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKK 830
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H + +T DGE+ G + G L +P + T P + ++G +I
Sbjct: 831 VKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIG-----GMEGKNIIG 885
Query: 341 IAAGAEHS 348
+A G +
Sbjct: 886 VACGPTQT 893
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 20/275 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P++++ V +A GGAH +T+ G+++
Sbjct: 4568 EVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITA-----NGELY 4622
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D PK V +R +G + ++D +++ GDG
Sbjct: 4623 TWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGD 4682
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ + + V ++ CG + S+ L K VY +G G +LG
Sbjct: 4683 YGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTK---SGSVYTWGKGDYHRLG 4739
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
S D +R P+ L + +++ ++ A + G +++WG G +T+
Sbjct: 4740 HGSDDHVRR---PRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTN 4796
Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEV 300
+ P+ + S L ++ A G H L + + V
Sbjct: 4797 AIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 21/295 (7%)
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
F D I G ++ G SD G +F+ G+G G+LGHGDY++H P ++ K
Sbjct: 614 FGDREVIRIASHPDGKHYMGLTSD-GEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQ 672
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V +I CG +S+ L + +VY +G G G+LG ++ + H I V
Sbjct: 673 VAKICCGSSYSVALTSN---GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVA 729
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL--SFSQAALGWNHV 291
+ ++ A++ G +Y+WG G P+ + + + G
Sbjct: 730 CGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFS 789
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ LT G V G + L + P +++ L KV IA G+ H +
Sbjct: 790 MALTKSGAVYTWGKGDNYRLGHGTEDHARHP-----KQIEALSSKKVKDIAIGSLHCMAI 844
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
TE+ + WG E GQLG + + P ++ G E +N + V CG T+A
Sbjct: 845 TEDGELYGWGRNEQGQLGNPSISNFTEPTLIG-GMEGKN---IIGVACGPTQTFA 895
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 164/388 (42%), Gaps = 37/388 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++W WG GQLG P +++ L G + A+T+ GKVF
Sbjct: 4462 QIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAE-----GKVF 4516
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G +P + +++G H +S G +++ G+G
Sbjct: 4517 ATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGE 4576
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ P + S K V IA G HS + + ++Y +G G+ G+LG
Sbjct: 4577 DGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITAN---GELYTWGKGRYGRLG 4633
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWG--------RG 262
S+D+ R P++ L +V ++ +GD ++ ++ + ++++WG RG
Sbjct: 4634 HGDSEDQPR----PKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4689
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ V + G + LT G V G + L RP
Sbjct: 4690 GSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRP 4749
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KVS L KVI +A G+ H T+ + +WG + GQLG G T P++V
Sbjct: 4750 -----RKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQRPRLV 4804
Query: 383 N--LGDEFQNRDTQLEVFCGSGFTYAIS 408
LG + NR V CGS + A S
Sbjct: 4805 ASLLGKKI-NR-----VACGSAHSLAWS 4826
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 148/325 (45%), Gaps = 32/325 (9%)
Query: 91 GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+++ WG GQLG VD A +PV+ + G V+ G +F
Sbjct: 4461 GQIWGWGHNHRGQLGG---VDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFA 4517
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGS 207
G G G+LG G S S P ++ S + + ++A G +H L L + +VY +G
Sbjct: 4518 TGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAE---GEVYSWGE 4574
Query: 208 GKRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
G+ G+LG RS P+V L E+V I+A G SA ++A G LYTWG+
Sbjct: 4575 GEDGKLGHGN---RSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGR 4631
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G + D P+ + + S+ + G L +T D V G +G L
Sbjct: 4632 LGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4691
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
P+ K+ L G V+++ G++ S +T++ ++ TWG G++ +LG G+
Sbjct: 4692 DGCKVPM-----KIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHV 4746
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGS 401
P+ V+ QN+ ++V CGS
Sbjct: 4747 RRPRKVS---ALQNKKV-IDVACGS 4767
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ V+ +G + QLG K + LP + L + V I ++ EG +Y
Sbjct: 3462 IQTNVFCWGLNDKDQLGGPKGS--KIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519
Query: 258 TWGRGFN-------STSDVNCPQSLPSSLSFSQAAL-------GWNHVLVLTGDGEVLML 303
G N +T V+ P+ + S SQ + G H L LT DG+V
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQI---TSLSQYVIKKVAVHSGGRHSLALTTDGKVFSW 3576
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G G L R + +P + L +V IA G+ HSA +T N + TWG G
Sbjct: 3577 GEGDDGKLGHFSRWNCDKP-----RLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLG 3631
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
E+G+LG G+ Q+ PK V + + ++V CGS
Sbjct: 3632 EYGRLGHGDNTTQLKPKQV----KALAHERVVQVACGS 3665
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG +GQLG G + P+L+ ++ +ACG AH LA ++ +V GK+
Sbjct: 4778 EVFSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSAGKLP 4837
Query: 95 S 95
S
Sbjct: 4838 S 4838
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 154/327 (47%), Gaps = 27/327 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV--SDSGCLFTC 150
V++WG G +G LGHGE +D P+ V Y I ++ G H+ F ++ G +++
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLA--YNIKRLACGL-HTVFALNAEDGKVYSW 57
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG G+ RS +P+K++SF + NV I+C H+ + VY FG
Sbjct: 58 GLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------- 262
QLGV + PQ+ L+D I+ ++ SAALSA+G+L+ WG G
Sbjct: 118 SQLGVGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLG 175
Query: 263 -FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+N +++ A G H +LT G V G + +G ++ P
Sbjct: 176 NYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHL 235
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P ++ + + ++ G+ HSA +TEN + WG G+LGLG+ + P
Sbjct: 236 PYRISFNTSK-----RFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTE 290
Query: 382 VNLGDEFQNRDTQL-EVFCGSGFTYAI 407
V + F RD ++ + CGS T A+
Sbjct: 291 V---EGF--RDKKIGRIACGSKHTAAL 312
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 106/227 (46%), Gaps = 10/227 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+SWG G G LG G L +P + S+V ++C H A+TS ++ G V+
Sbjct: 53 KVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNT--GSVY 110
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G S+ QLG G+ P+ VT + I ++ G HS +S G LF G G
Sbjct: 111 SFGDNSNSQLGVGDTEPYAEPQLVTVLNDE--NIIKVACGKYHSAALSAKGNLFLWGLGD 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G+Y + P + K V +ACG H+ +L +G VY FGS GQ
Sbjct: 169 DGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCIL---TVGGLVYAFGSNIYGQ- 224
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
++ + LP V +S SAA++ G LY WG
Sbjct: 225 -IAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWG 270
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 24/192 (12%)
Query: 20 AKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQLLNL 63
A+P++ ++ ++KV + WG G DGQLG G + P +L++
Sbjct: 129 AEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHI 188
Query: 64 SSLSSVSM-LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
+ M +ACG H LT +GG V+++G GQ+ M P ++F
Sbjct: 189 GEKKAKVMDVACGDLHTCILT-----VGGLVYAFGSNIYGQIAAPSMNKFHLPYRISFNT 243
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
R+ +S G HS ++++G L+ G T G+LG GD + SSP +V F +K + +
Sbjct: 244 SKRFV--SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGR 301
Query: 183 IACGMRHSLVLL 194
IACG +H+ L+
Sbjct: 302 IACGSKHTAALI 313
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 166/390 (42%), Gaps = 73/390 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G G G+LGTG + + P LL + +A GG H LAL+S G
Sbjct: 3947 KVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GH 4001
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + PK + G I I+ G +HS +S +G L+T G
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDRPKLIEALLGTE--IVDIACGGHHSAAISSAGWLYTWGK 4059
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD P V++ V +ACG +L + D + V+ +G G
Sbjct: 4060 GRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4116
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4117 GKLG--RGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKG-------- 4166
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4167 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4185
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
S L G K++ IA G+ H ++ + TWG + GQLG G T Q P++V+ Q
Sbjct: 4186 SALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVH---ALQG 4242
Query: 391 RDTQLEVFCGSGFTYAIS----RHCLPSQT 416
++ V CGS T A S H LP+ T
Sbjct: 4243 KNIT-RVACGSAHTLAWSTTKATHSLPAAT 4271
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 175/395 (44%), Gaps = 47/395 (11%)
Query: 31 QQVVKVWSWGAGTDGQLGTGR-------LHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
QQ V+ WG QLG + +H E+ LS L + + GG+ L +
Sbjct: 2919 QQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEV------LSKLKPIHI--AGGSKTLFVV 2970
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
S GK+++ G G++G+LG G+ + PKP+ F + + +G H+ ++
Sbjct: 2971 SQE----GKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQ 3026
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G +F+ G+G G+LGHG+ S P + + +K + IACG HS + + ++Y
Sbjct: 3027 DGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASN---GELY 3083
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG 260
+G G+ G+LG D + P++ L ++ + A G R A AL+ +G +Y+WG
Sbjct: 3084 TWGLGEYGRLG-HGDTTTHLK-PKLVDALVGQRVIQV-ACGSRDAQTMALTEDGSVYSWG 3140
Query: 261 RG----FNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G C LP + L Q G L LT GEV G + L
Sbjct: 3141 DGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3200
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP V L G KV+ +A GA H VT+ + WG +HGQ G G+
Sbjct: 3201 HGNDHHVRRP-----TLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGS 3255
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYA 406
T P +V NL D NR V CGS + A
Sbjct: 3256 TMVNRKPSLVHNLEDAKVNR-----VACGSSHSIA 3285
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G PQ++ + S +V+ +ACG + A++S G++ +
Sbjct: 522 VYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISS-----TGELLT 576
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG--FVSDSGCLFTCGDG 153
WGRGS G+LGHG D P VT +GH T+TH++ G S V++SG +F+ GDG
Sbjct: 577 WGRGSYGRLGHGICDDISIPTVVTALNGH--TVTHVACGSGDSQTLCVTNSGIVFSWGDG 634
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G P V +++NV ++ CG + S L +VY +G G +L
Sbjct: 635 DYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH---GEVYTWGKGDHYRL 691
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + V P++ GL + ++ +S A++ + +Y WGR
Sbjct: 692 GHGNE--EHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGR 737
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H LALT+ G V+SWG G G+LGHG+ P+ + T+T+I+ G
Sbjct: 510 GKHYLALTT-----KGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDR--TVTYIACGS 562
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+S +S +G L T G G++G+LGHG S P V++ V +ACG S L
Sbjct: 563 TYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTL-- 620
Query: 196 DCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
C+ N V+ +G G G+LG + LP++ L D +V + G SAAL+A
Sbjct: 621 -CVTNSGIVFSWGDGDYGKLG--RGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677
Query: 254 GHLYTWGRG 262
G +YTWG+G
Sbjct: 678 GEVYTWGKG 686
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + + LP ++ L I++ G G+++ A++A+G +Y
Sbjct: 3896 IYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAG----GEQTLFAVTADGKVYAT 3951
Query: 260 GRG------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G V P L S + + A+ G H L L+ +G V G G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R++ RP + + L G +++ IA G HSA ++ + TWG G +G+LG
Sbjct: 4012 KLGHGNRITYDRP-----KLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLG 4066
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ P VV ++ ++V CGSG
Sbjct: 4067 HGDSDDQLKPTVVTALQGYK----VIDVACGSG 4095
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 47/269 (17%)
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G+ + S S P + V Q+ C R L+L L +VY G Q
Sbjct: 439 GNVHFGSGSMPFYCDAIAEIGVKQLCCTERALLIL---SLSGKVYMMYYGSETQY----- 490
Query: 219 RIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRG----FNSTSDVNC- 271
PQ G D ++V I++ +G AL+ +G +Y+WG G +C
Sbjct: 491 -------PQSVYGFAD-DVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD 542
Query: 272 -PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG-GSH----HGMLSDPERVSSTRPL 323
PQ + S + + A G + ++ GE+L G GS+ HG+ D +
Sbjct: 543 EPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDD---------I 593
Query: 324 SVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
S+ V+ L+G V +A G+ + VT + + +WG G++G+LG G + PK+
Sbjct: 594 SIP-TVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKI 652
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V D+ +++ ++VFCG F+ A++ H
Sbjct: 653 V---DKLLDQNV-VKVFCGGQFSAALTAH 677
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VY +G+G G+LG S PQV L D + I+ SAA+S+ G L TWGR
Sbjct: 522 VYSWGNGDGGRLGHGDSF--SCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGR 579
Query: 262 G------FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G D++ P + + +++ G + L +T G V G +G L
Sbjct: 580 GSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKL 639
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
S P + V L V+++ G + SA +T + + TWG G+H +LG G
Sbjct: 640 GRGGSDGSKLP-----KIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHG 694
Query: 372 NTCDQIHPKVV 382
N PK+V
Sbjct: 695 NEEHVRFPKLV 705
>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
Length = 1056
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 175/386 (45%), Gaps = 72/386 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ S++ V ++CG H A+++ G +F
Sbjct: 277 EVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHTCAISA-----SGDLF 331
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG GS +G LG+ PK V+ +G + ++ G HS ++ +G L+T G
Sbjct: 332 NWGDGSYHAGLLGYDTGASHWLPKRVSGPLEG--LQVLFVACGSWHSALITSTGRLYTFG 389
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHG+ S + P +V + ++ACG+ HS +++ + + ++Y
Sbjct: 390 DGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAIVEATVQTGMNMVSKKLYT 449
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG GD+ A L
Sbjct: 450 WGDGDKNRLG----------------------------QGDKEARLIP------------ 469
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C Q+L +F Q A G N + L G V +G S +G L +P + +P
Sbjct: 470 -----TCVQALLEH-NFHQLACGQNMTVALATSGHVYTMGSSDNGQLGNP-KSDGKQPCL 522
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V + L V +I+ GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 523 VKDKLAHEL----VEEISCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDKKAPTIV-- 576
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS FT I H
Sbjct: 577 -EALKDRHVK-SISCGSNFTTCICIH 600
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 55/239 (23%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P + S V +V+QI CG RH + + +V+ +G G+LG D +S P++
Sbjct: 248 PKPLESDVVLDVNQIVCGSRHIALTTRQ---GEVFTWGEELGGRLGHGTDT--DISRPKL 302
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGW 288
+ + IS + A+SA G L+ WG G S+ LG+
Sbjct: 303 VESISVTIVDFISCGEFHTCAISASGDLFNWGDG-----------------SYHAGLLGY 345
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G+ H + P+RVS L+G++V+ +A G+ HS
Sbjct: 346 D--------------TGASHWL---PKRVSGP------------LEGLQVLFVACGSWHS 376
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
A++T + T+G G G LG GN +PK V + F+ ++V CG + AI
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRT----IKVACGVWHSAAI 431
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 127 bits (319), Expect = 1e-26, Method: Composition-based stats.
Identities = 119/437 (27%), Positives = 189/437 (43%), Gaps = 98/437 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL--SPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGG 91
++++WG GQLG G ++ +P+ L S + M+ CGG H + + S V
Sbjct: 1238 ELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVV--- 1294
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+SWG+ GQLGHG + V PK + G + I I+AG+ H+ + SG L++
Sbjct: 1295 --YSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQK--IQAIAAGFAHTIVLKKSGELYSF 1350
Query: 151 GDGTFGQLGHGDYRSHSSPVKV--SSFVN-----KNVHQIACGMRHSLVLLKDCLGN-QV 202
G G GQLGHG + S S P ++ ++ V + QIACG HS++ C N +V
Sbjct: 1351 GYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVI----CSDNGEV 1406
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
Y +G GK+GQLG S++ P++ L + IS + A + ++Y+WG G
Sbjct: 1407 YSWGLGKQGQLG--HGNYESIARPRLIEALKGV--TKISCGHFYTMATTDLKNVYSWGLG 1462
Query: 263 ----FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGE------------- 299
SD N ++ P + F S+ G NH + LT G+
Sbjct: 1463 EHMKLGHGSDKN--EATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVN 1520
Query: 300 ----------------------------------------VLMLGGSHHGMLS---DPER 316
+ G HG L D +
Sbjct: 1521 DFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKS 1580
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+P+ A++ V+ L+ +I I+ G + +A++T N A+ WG+G GQ+G G T D
Sbjct: 1581 PFFDKPIPTAIKGVNALN---LIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDA 1637
Query: 377 IHPKVVNLGDEFQNRDT 393
P + L D N+ +
Sbjct: 1638 WVPIRIPLTDSKANQSS 1654
Score = 107 bits (268), Expect = 7e-21, Method: Composition-based stats.
Identities = 98/340 (28%), Positives = 150/340 (44%), Gaps = 62/340 (18%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTIT 129
++CG HV AL S S G++F+WG+ SGQLGHG + + PK + FF G + I
Sbjct: 1223 VSCGWDHV-ALISES----GELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRG-KSPII 1276
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMR 188
+ G HS V +++ G FGQLGHG S + P + + + IA G
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFA 1336
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H++VL K ++Y FG G +GQLG S S+P I L+ IVGI G +
Sbjct: 1337 HTIVLKKS---GELYSFGYGDQGQLG--HGSFVSKSIP-TRIELN--TIVGIQHGGGKIT 1388
Query: 249 ALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
++ GF H ++ + +GEV G
Sbjct: 1389 QIAC---------GF-------------------------GHSVICSDNGEVYSWGLGKQ 1414
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L S RP + L GV +I+ G ++ T+ + + +WG GEH +L
Sbjct: 1415 GQLGHGNYESIARP-----RLIEALKGVT--KISCGHFYTMATTDLKNVYSWGLGEHMKL 1467
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G G+ ++ P+VV D F ++ ++ CG T ++
Sbjct: 1468 GHGSDKNEATPRVV---DFFIQKNVS-KIVCGLNHTITLT 1503
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 238 VGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSLSFSQAA-------L 286
+ +S D A +S G L+TWG+ D+ Q+ P L F +
Sbjct: 1221 IKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G H + + D V G G L + VS RP + + ++ G K+ IAAG
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRP-----KIIEDISGQKIQAIAAGF 1335
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
H+ V+ ++ + ++G+G+ GQLG G+ + P + L
Sbjct: 1336 AHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIEL 1374
Score = 43.1 bits (100), Expect = 0.28, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 29 EEQQVVKVWSWGAGTDGQLGTG-----RLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
E QV +++ GAG G+LG G D+ P + + ++ ++CG +T
Sbjct: 1554 ENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMIT 1613
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
S G ++ WG G+ GQ+G+G+ DA P + D
Sbjct: 1614 S-----NGALYVWGYGNFGQIGNGKTDDAWVPIRIPLTD 1647
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 177/380 (46%), Gaps = 46/380 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G+ FSWG S G+LGHG VD+
Sbjct: 282 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHG--VDSN 334
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+P + I ++ G HS V+ SG L+T G G FG LGHG+ SH P +V+
Sbjct: 335 IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVN 394
Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
F+ + +H IACG H+ V+ Q++ FG G G LG + SV +P+
Sbjct: 395 -FLLEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLGHGDKK--SVFIPREVDS 448
Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST--SDVNCPQSLPS 277
L + V + +AA+ + G L+TWG G P+ +P+
Sbjct: 449 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPT 508
Query: 278 SLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
++ F Q A G + + LT G V +G +G L + T P V
Sbjct: 509 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT-PNRVE----G 563
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
L V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V +
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVE-----SLK 618
Query: 392 DTQLE-VFCGSGFTYAISRH 410
D Q++ + CG+ FT A+ H
Sbjct: 619 DKQVKSIACGTNFTAAVCIH 638
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 32/337 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + P+L++ + +++ ++ACG H A+T + G +++W
Sbjct: 317 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 371
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 372 GKGDFGVLGHGNEVSHWVPKRVNFLLEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 429
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +G+ +++ +G
Sbjct: 430 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 489
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G +G+LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 490 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 547
Query: 262 GFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D P + L SF + A G HV VLT EV G +G L +
Sbjct: 548 LGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 607
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V +L +V IA G +A V +R
Sbjct: 608 RNSPT-----LVESLKDKQVKSIACGTNFTAAVCIHR 639
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G +L P + + +ACG + +ALT+ G V+
Sbjct: 484 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 538
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P V +G H+ + I+ G H ++ ++T G
Sbjct: 539 TMGSPVYGQLGNSH-ADGKTPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 594
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 595 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 628
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 45/382 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G++FSWG S G+LGHG D
Sbjct: 277 DALLPKALESTVVLDVHGIACGGRHAVLVTRQ-----GEIFSWGEESGGRLGHGVEADVS 331
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
+PK + G + ++ G H+ V+ SG L+T GDGT +G LGHG SH P K
Sbjct: 332 HPKIIDTLSGTNVEL--VACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389
Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----------VSKDRI 220
V V I+CG H+ V+ Q++ FG G G LG + +
Sbjct: 390 VGGQMEGIRVSYISCGAWHTAVVTS---AGQLFTFGDGSFGALGHGDHITSNFPREVETL 446
Query: 221 RSVSLPQVTIGL----HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQS 274
R + +V G+ +E + ++ SA+ S+ LYTWG G N P+
Sbjct: 447 RGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSR-KLYTWGDGDKGRLGHGDNEPRL 505
Query: 275 LPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+P ++ Q A G + + LT G V +G + +G L + P V E
Sbjct: 506 VPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSAT-ANGKLPTCVEGE 564
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
++ V ++A G+ H AV+T + TWG G +GQLG G+ + P +V++ +
Sbjct: 565 IANSF----VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDK 620
Query: 389 QNRDTQLEVFCGSGFTYAISRH 410
Q ++ V CGS FT I H
Sbjct: 621 QVKN----VACGSKFTVVICIH 638
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 167/340 (49%), Gaps = 37/340 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P++++ S ++V ++ACG H A+T + G ++
Sbjct: 310 EIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT-----LSGDLY 364
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V P+ V +G R +++IS G H+ V+ +G LFT G
Sbjct: 365 TWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIR--VSYISCGAWHTAVVTSAGQLFTFG 422
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC------------LG 199
DG+FG LGHGD+ + + P +V + ++ACG+ H+ ++
Sbjct: 423 DGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSS 482
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
++Y +G G +G+LG + R V P+ L + I ++ D + AL+ G +YT
Sbjct: 483 RKLYTWGDGDKGRLGHGDNEPRLV--PECVAALIEERICQVACGNDLTVALTTAGRVYTM 540
Query: 259 ----WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+G+ ++T++ P + ++ S + A G HV VLT EV G +G L
Sbjct: 541 GSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V + L +V +A G++ + V+
Sbjct: 601 GHGDNNHRNTPTIVDV-----LKDKQVKNVACGSKFTVVI 635
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 129/320 (40%), Gaps = 84/320 (26%)
Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
+DAL PK + D H I+ G H+ V+ G +F+ G+ + G+LGHG
Sbjct: 276 LDALLPKALESTVVLDVH-----GIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIRSVS 224
S P + + NV +ACG H+ + L +Y +G G G LG + S
Sbjct: 331 SHPKIIDTLSGTNVELVACGEYHTCAVT---LSGDLYTWGDGTHNYGLLGHGSE--VSHW 385
Query: 225 LPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQ 283
+PQ G + I + IS +A +++ G L+T+G G S
Sbjct: 386 IPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDG-------------------SF 426
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
ALG HG + ++S P +V L G++ ++A
Sbjct: 427 GALG--------------------HG-----DHITSNFP-----REVETLRGLRTTKVAC 456
Query: 344 GAEHSAVVTE---------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
G H+A E +R + TWG G+ G+LG G+ ++ P+ V E
Sbjct: 457 GVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIE- 515
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
+ +V CG+ T A++
Sbjct: 516 ---ERICQVACGNDLTVALT 532
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 177/380 (46%), Gaps = 46/380 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G+ FSWG S G+LGHG VD+
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHG--VDSN 347
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+P + I ++ G HS V+ SG L+T G G FG LGHG+ SH P +V+
Sbjct: 348 IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVN 407
Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
F+ + +H IACG H+ V+ Q++ FG G G LG + SV +P+
Sbjct: 408 -FLLEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLGHGDKK--SVFIPREVDS 461
Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST--SDVNCPQSLPS 277
L + V + +AA+ + G L+TWG G P+ +P+
Sbjct: 462 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPT 521
Query: 278 SLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
++ F Q A G + + LT G V +G +G L + T P V
Sbjct: 522 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT-PNRVE----G 576
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
L V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V +
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVE-----SLK 631
Query: 392 DTQLE-VFCGSGFTYAISRH 410
D Q++ + CG+ FT A+ H
Sbjct: 632 DKQVKSIACGTNFTAAVCIH 651
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 32/337 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + P+L++ + +++ ++ACG H A+T + G +++W
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 384
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 385 GKGDFGVLGHGNEVSHWVPKRVNFLLEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 442
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +G+ +++ +G
Sbjct: 443 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G +G+LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 503 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 262 GFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D P + L SF + A G HV VLT EV G +G L +
Sbjct: 561 LGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V +L +V IA G +A V +R
Sbjct: 621 RNSPTL-----VESLKDKQVKSIACGTNFTAAVCIHR 652
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G +L P + + +ACG + +ALT+ G V+
Sbjct: 497 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 551
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P V +G H+ + I+ G H ++ ++T G
Sbjct: 552 TMGSPVYGQLGNSH-ADGKTPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 608 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 180/387 (46%), Gaps = 73/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG + G+LG G + + P L+ + S+V +ACG H A+T + G+++
Sbjct: 362 EMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVT-----MAGEIY 416
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK + +G + ++ G H+ ++ +G LFT G
Sbjct: 417 TWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEG--LQVAFVTCGPWHTALITSTGQLFTFG 474
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD + S P +V S +ACG+ H+ +
Sbjct: 475 DGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAI------------------ 516
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----- 266
+E++ + SA++S+ G L+TWG G +
Sbjct: 517 -----------------------VEVIVTQS----SASISS-GKLFTWGDGDKNRLGHGD 548
Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
D + S+L +F + A G + + LT G V +G + +G L +P+ S L
Sbjct: 549 KDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQ---SDGKL 605
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+E L G V +IA GA H V+T + TWG G +G+LG G+ D+ P +V
Sbjct: 606 PCLVE--DKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLV- 662
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGS ++ AI H
Sbjct: 663 --EALKDRHVKY-IACGSNYSAAICLH 686
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 74/290 (25%)
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
D L PKP+ + I+ G H+ V+ G +FT G+ + G+LGHG ++ P
Sbjct: 328 TDILLPKPLE--SNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQP 385
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVS--L 225
V + + V +ACG H+ + + ++Y +G G G LG D VS +
Sbjct: 386 CLVEALASSTVDFVACGEFHTCAV---TMAGEIYTWGDGTHNAGLLGHGTD----VSHWI 438
Query: 226 PQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
P+ G L +++ ++ +A +++ G L+T+
Sbjct: 439 PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTF------------------------- 473
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
GDG +LG HG D E +S R +V +L G++ + +A G
Sbjct: 474 -----------GDGTFGVLG---HG---DRENISYPR-------EVESLSGLRTVSVACG 509
Query: 345 AEHSA-----VVTENRA------IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
H+A +VT++ A + TWG G+ +LG G+ ++ P ++
Sbjct: 510 VWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCIS 559
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 177/387 (45%), Gaps = 60/387 (15%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H + +T G+ FSWG S G+LGHG VD+
Sbjct: 295 DSLLPKALESTIVLDVQNIACGGQHAVLVTK-----QGESFSWGEESEGRLGHG--VDSN 347
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+P + I ++ G HS V+ SG L+T G G FG LGHG+ SH P +V+
Sbjct: 348 IQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVN 407
Query: 174 SFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
F+ + +H IACG H+ V+ Q++ FG G G LG + SV +P+
Sbjct: 408 -FLLEGIHVSSIACGPYHTAVVTS---AGQLFTFGDGTFGVLGHGDKK--SVFIPREVDS 461
Query: 232 LHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST--SDVNCPQSLPS 277
L + V + +AA+ + G L+TWG G P+ +P+
Sbjct: 462 LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPT 521
Query: 278 SLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD-------PERVSSTRPLS 324
++ F Q A G + + LT G V +G +G L + P RV
Sbjct: 522 CVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEG----- 576
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L V +IA GA H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 577 -------KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVE- 628
Query: 385 GDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT A+ H
Sbjct: 629 ----SLKDKQVKSIACGTNFTAAVCIH 651
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 32/337 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG ++G+LG G + P+L++ + +++ ++ACG H A+T + G +++W
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVT-----LSGDLYTW 384
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G+G G LGHG V PK V F +G ++ I+ G H+ V+ +G LFT GDGTF
Sbjct: 385 GKGDFGVLGHGNEVSHWVPKRVNFLLEG--IHVSSIACGPYHTAVVTSAGQLFTFGDGTF 442
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVYGFG 206
G LGHGD +S P +V S + ACG+ H+ +++ +G+ +++ +G
Sbjct: 443 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR 261
G +G+LG + V P L + ++ + AL+ GH+YT +G+
Sbjct: 503 DGDKGRLGHGNKEPKLV--PTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 262 GFNSTSDVNCPQSLPSSL--SF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
NS +D P + L SF + A G HV VLT EV G +G L +
Sbjct: 561 LGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDD 620
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V +L +V IA G +A V +R
Sbjct: 621 RNSPTL-----VESLKDKQVKSIACGTNFTAAVCIHR 652
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G +L P + + +ACG + +ALT+ G V+
Sbjct: 497 KLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT-----SGHVY 551
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ D P V +G H+ + I+ G H ++ ++T G
Sbjct: 552 TMGSPVYGQLGNSH-ADGKLPNRV---EGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 607
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G+ G+LGHGD +SP V S +K V IACG
Sbjct: 608 GSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 180/400 (45%), Gaps = 65/400 (16%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G+S L P + QQ++ V + G G+ G+LG G D+L
Sbjct: 3198 ETGRSLLTPTVTPSFSQA---QQIICGQNCTFVIQANGTVQACGEGSYGRLGQGN-SDDL 3253
Query: 57 SPQLLNLSSLSS--VSML--ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
QL +S+L V+ L +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 3254 H-QLTIISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGNSDR 3307
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
P+ + G I ++ G+ HS VS G LFT G+G +G+LG G+ + P +
Sbjct: 3308 QRRPRQIEALQGEE--IIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPER 3365
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
V++ + V Q+ CG+ H+L + D GN V+ FG G G+LG+ +S PQ
Sbjct: 3366 VTALEGQMVGQVGCGLNHTLAVSAD--GNTVWSFGDGDYGKLGLGNSTAKST--PQRVDP 3421
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSF--SQ 283
L I + + S AL+ +G ++T+G+ + + + N PQ +P+ +F
Sbjct: 3422 LCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVED 3481
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
+G H L LT GEV G + G L + + P V+ L G V Q+
Sbjct: 3482 VVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPC-----LVTALQGKNVRQV-- 3534
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
WG GQLG+G+T + P +V
Sbjct: 3535 ----------------WGSNGDGQLGIGDTNARREPCLVT 3558
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 146/359 (40%), Gaps = 75/359 (20%)
Query: 88 VIGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++GG+ + WG G GQL L P F + I G N + + +G
Sbjct: 3178 MLGGRCEAYMWGGGRHGQLAETGR-SLLTPTVTPSFSQAQQII----CGQNCTFVIQANG 3232
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGNQV 202
+ CG+G++G+LG G+ +S+ V Q+ +CG HS+ L + +V
Sbjct: 3233 TVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTE---SGEV 3289
Query: 203 YGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ +G G G+LG + DR R P+ L EI+ ++ SA +SA+G L+T+G
Sbjct: 3290 FSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGN 3346
Query: 262 ------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGE-VLMLGGSHHGML 311
G +TS+ P+ + ++L Q G NH L ++ DG V G +G L
Sbjct: 3347 GDYGRLGLGNTSNKKIPERV-TALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKL 3405
Query: 312 --------SDPERVSST-----------RPLSVALEK----------------------- 329
S P+RV SVAL K
Sbjct: 3406 GLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNH 3465
Query: 330 -----VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V L+ V + GAEHS +T + WG GQLG+G+T + P +V
Sbjct: 3466 NRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPCLVT 3524
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G G GQL RS +P SF QI CG + V+ + V G
Sbjct: 3186 YMWGGGRHGQLAETG-RSLLTPTVTPSF--SQAQQIICGQNCTFVIQAN---GTVQACGE 3239
Query: 208 GKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
G G+LG + D + +++ G ++V + S AL+ G +++WG G
Sbjct: 3240 GSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3299
Query: 264 --NSTSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ SD Q P + Q A G+ H V++ DG++ G +G L
Sbjct: 3300 LGHGNSDR---QRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTC 374
+ P E+V+ L+G V Q+ G H+ AV + + ++G G++G+LGLGN+
Sbjct: 3357 TSNKKIP-----ERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNST 3411
Query: 375 DQIHPKVVN----LGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P+ V+ +G + +V CG+ F+ A+++
Sbjct: 3412 AKSTPQRVDPLCGIGVK--------KVCCGTQFSVALTK 3442
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 41/189 (21%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWS+G G G+LG G + +PQ ++ V + CG +ALT G+VF+
Sbjct: 3394 VWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTK-----DGRVFT 3448
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG---------- 145
+G+ +G E + +P + + + G HS ++ +G
Sbjct: 3449 FGQ--ERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGD 3506
Query: 146 --------------CLFTC----------GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
CL T G GQLG GD + P V+ KNV
Sbjct: 3507 GQLGIGDTNARREPCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVR 3566
Query: 182 QIACGMRHS 190
QI+ G HS
Sbjct: 3567 QISAGRNHS 3575
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 25/105 (23%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VW+WG+ DGQLG G + P L+ A G +V +
Sbjct: 3497 EVWAWGSNGDGQLGIGDTNARREPCLVT----------ALQGKNVRQV------------ 3534
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
WG GQLG G+ P VT G + ISAG NHSG
Sbjct: 3535 -WGSNGDGQLGIGDTNARREPCLVTDLQGK--NVRQISAGRNHSG 3576
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 166/378 (43%), Gaps = 34/378 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D P + + L V ++ G H LAL G V+
Sbjct: 63 VWAWGYNGFGQLGNGTYKDSCIP--VRVKGLKDVVAVSAGTFHSLALKKD-----GSVWI 115
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQ D P V I I+AGW+ S V G ++ G
Sbjct: 116 WGHTNYGQRKSDVYRDFTTPVKVKELK----NIVAIAAGWDFSLAVGSDGSVWAWGINNH 171
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G + + PVKV K+V ++ G+ HSL L +D V+ +G + G+LG
Sbjct: 172 GELGIGSLKPSAVPVKVKGL--KDVVAVSAGLYHSLALKRD---GTVWSWGYNEDGELGN 226
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
+VS+P GL D+ + ISA G S AL+ +G ++ WG G + +
Sbjct: 227 RPTEDYTVSVPVRVKGLSDV--IAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYI 284
Query: 276 PSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P + + A G+ H + L DG V + G + +G+L S+ S L +V
Sbjct: 285 PVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLG-----SNVGEHSFLLVQVK 339
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
L V+ +AAG HS +T+N I WG GQLG N + NL + +
Sbjct: 340 GLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSL-----NLPYKVKWL 392
Query: 392 DTQLEVFCGSGFTYAISR 409
D + + G T AI R
Sbjct: 393 DNVVAIATGGSHTLAIKR 410
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 154/346 (44%), Gaps = 37/346 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLG R ++ S L + L +V +A GG+H LA+ G V+
Sbjct: 363 IWAWGNNAFGQLG--RENNSFSLNLPYKVKWLDNVVAIATGGSHTLAIKRD-----GTVW 415
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--D 152
SWG + GQLG+G + P V + + AG HS V G ++ G +
Sbjct: 416 SWGANNKGQLGNGTYKSSYIPTCVKGLN----NAVLVEAGSQHSLAVDKDGTVWVWGFIE 471
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ + D S P+K+ ++ +IA G+ + LVL KD GN ++G G+
Sbjct: 472 SVWSEKNTKDILS-PLPIKIGKL--NDITEIAGGLDYILVLRKD--GN-IWGCGN----D 521
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIV-GISANGDRSAALSAEGHLYTWGRGF--NSTSDV 269
K SVS I L +I+ V I+A S A+ +G +++WG N +
Sbjct: 522 FYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKKYL 581
Query: 270 NC---PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
N P + + A G H L L DG V G + +G L + R +S P+
Sbjct: 582 NFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--- 638
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+V L+ V+ IAAG HS + ++ + WG GQLG N
Sbjct: 639 --RVKGLN--NVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRN 680
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 157/354 (44%), Gaps = 39/354 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG + G LG+ E S L+ + L +V +A G H +ALT G +++
Sbjct: 313 VWVWGHNSYGVLGSNV--GEHSFLLVQVKGLKNVVAVAAGRLHSVALTK-----NGTIWA 365
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG + GQLG +L P V + D + I+ G +H+ + G +++ G
Sbjct: 366 WGNNAFGQLGRENNSFSLNLPYKVKWLD----NVVAIATGGSHTLAIKRDGTVWSWGANN 421
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG+G Y+S P V N + G +HSL + KD V+GF +
Sbjct: 422 KGQLGNGTYKSSYIPTCVKGL--NNAVLVEAGSQHSLAVDKDGT-VWVWGFIESVWSEKN 478
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTS 267
+KD + LP L+DI I+ D L +G+++ G F +S S
Sbjct: 479 -TKDILSP--LPIKIGKLNDI--TEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVS 533
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SSTRPLSV 325
V L + + A G+ H L + DG V G ++ L + ++ S +P+
Sbjct: 534 SVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTN---LDNKKKYLNFSEKPV-- 588
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
K+ L GV +++AAG HS + ++ + +WG+ +GQLG G P
Sbjct: 589 ---KIKGLSGV--VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVP 637
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 157/382 (41%), Gaps = 80/382 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG DG+LG D + + LS V ++ GG H +AL G V+
Sbjct: 213 VWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKD-----GAVWI 267
Query: 96 WGRGSSGQLGHGEMVDALYP-------KPVTFFDGHRYTI-------------------- 128
WG G + +G++ ++ P K V G+R++I
Sbjct: 268 WGGGIIEK--NGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLG 325
Query: 129 -------------------THISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSS 168
++AG HS ++ +G ++ G+ FGQLG + S +
Sbjct: 326 SNVGEHSFLLVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNL 385
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P KV NV IA G H+L + +D V+ +G+ +GQLG +S +P
Sbjct: 386 PYKVKWL--DNVVAIATGGSHTLAIKRD---GTVWSWGANNKGQLG--NGTYKSSYIPTC 438
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWG-----RGFNSTSDVNCPQSLPSSL---- 279
GL++ +V A S A+ +G ++ WG +T D+ P LP +
Sbjct: 439 VKGLNNAVLV--EAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSP--LPIKIGKLN 494
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
++ A G +++LVL DG + G + VSS L + L+ + N V
Sbjct: 495 DITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKL-IRLDNIKN-----VR 548
Query: 340 QIAAGAEHSAVVTENRAIMTWG 361
IAAG HS V + + +WG
Sbjct: 549 SIAAGYFHSLAVRTDGTVWSWG 570
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 138/339 (40%), Gaps = 46/339 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWGA GQLG G P + L++ ++ G H LA+ G V+
Sbjct: 414 VWSWGANNKGQLGNGTYKSSYIPTCV--KGLNNAVLVEAGSQHSLAVDKD-----GTVWV 466
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-DGT 154
WG S D L P P+ G IT I+ G ++ + G ++ CG D
Sbjct: 467 WGFIES-VWSEKNTKDILSPLPIKI--GKLNDITEIAGGLDYILVLRKDGNIWGCGNDFY 523
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS----GKR 210
F + S + +++ + KNV IA G HSL + D V+ +G K+
Sbjct: 524 FRKFTDSSVSSVTKLIRLDNI--KNVRSIAAGYFHSLAVRTD---GTVWSWGDTNLDNKK 578
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RG 262
L S+ ++ L V V ++A S AL +G +++WG G
Sbjct: 579 KYLNFSEKPVKIKGLSGV---------VKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNG 629
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
TS V P + + A G H + L DG V + G + G L ST P
Sbjct: 630 TRETSFV--PVRVKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVP 687
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L V EK+ N V+ IAAG HS + ++ + WG
Sbjct: 688 LKV--EKLDN-----VVAIAAGDTHSVALKKDGTVWVWG 719
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
G + + AG H+ + D G ++ G FGQLG+G Y+ PV+V K+V
Sbjct: 37 LQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGL--KDV 94
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
++ G HSL L KD V+ +G GQ D R + P L + IV I
Sbjct: 95 VAVSAGTFHSLALKKD---GSVWIWGHTNYGQR--KSDVYRDFTTPVKVKELKN--IVAI 147
Query: 241 SANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+A D S A+ ++G ++ WG G S P + + G H L L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
DG V G + G L + T + V ++ +S+ VI I+AG HS + ++
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-----VIAISAGGFHSIALNKD 262
Query: 355 RAIMTWG 361
A+ WG
Sbjct: 263 GAVWIWG 269
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 167/362 (46%), Gaps = 30/362 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
++++ WG + GQLG G + DE L+P + S+V+ +ACG H L LT+ G
Sbjct: 1 MELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTA-----SG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KV++ G QLGH + +P+ + IT I+ G HS +++ G + + G
Sbjct: 56 KVYACGSNDYAQLGH----ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWG 111
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
D GQLGH D P V + V+K V QIACG HSL L C G ++Y +GS
Sbjct: 112 DNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLAL--TCCG-ELYAWGSNIY 168
Query: 211 GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLGV + + + P + L I + I+ G+ S +S ++ WGR G
Sbjct: 169 GQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N ++ P L + +L A G + LT +G V G +G L +
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L G + Q+A G H+ A+V I +G G GQLG NT P+
Sbjct: 289 P-----RMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQ 343
Query: 381 VV 382
+V
Sbjct: 344 MV 345
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL----SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
++++WG+ GQLG + EL +P LL V +ACGG H ++ S+V G
Sbjct: 159 ELYAWGSNIYGQLGV-KTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFG 217
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
WGR + GQLG + + YP + + ++ G S F+++ G +FTC
Sbjct: 218 -----WGRNNCGQLGLNDETNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTC 270
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +GQLGHG + P V + + Q+ACG RH+L ++ ++YGFG G
Sbjct: 271 GAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVP--ARGRIYGFGLGSS 328
Query: 211 GQLGVSKDRIRSVSLPQVTIG 231
GQLG +S++LPQ+ IG
Sbjct: 329 GQLGTRN--TKSLNLPQMVIG 347
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G+ + GQLG G +P K+ + V+QIACG RH+L L +VY
Sbjct: 3 LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTA---SGKVYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
GS QLG R + +P++ D I I+ S AL+ G + +WG
Sbjct: 60 CGSNDYAQLGHELSSKRPLQIPELV----DCVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 262 ---GFNSTSDV-NCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGML--SD 313
G S DV P+++ + +S + Q A G NH L LT GE+ G + +G L
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKT 175
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + A ++ L G+ V IA G HS +++++ A+ WG GQLGL +
Sbjct: 176 PSELGQCN----APMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE 231
Query: 374 CDQIHP-----------KVVNLGDEF 388
++ +P + V GDEF
Sbjct: 232 TNRAYPTQLKTLRTLGVRFVACGDEF 257
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 153/344 (44%), Gaps = 42/344 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
KV++ G+ QLG H+ S + L + L ++ +ACG H +ALT G+
Sbjct: 56 KVYACGSNDYAQLG----HELSSKRPLQIPELVDCVITQIACGSRHSMALTE-----WGQ 106
Query: 93 VFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V SWG GQLGH D + PK V T+ I+ G NHS ++ G L+ G
Sbjct: 107 VLSWGDNECGQLGHASDQDVVQLPKTVRALVSK--TVVQIACGNNHSLALTCCGELYAWG 164
Query: 152 DGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+GQLG + ++P+ +++ + V IACG HS ++ K + V+G+G
Sbjct: 165 SNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISK---SSAVFGWGRN 221
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS 267
GQLG++ + R+ P L + + ++ + S L+ EG ++T G G +
Sbjct: 222 NCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG 279
Query: 268 DVNC-PQSLPSSL------SFSQAALGWNHVLVLT---------GDGEVLMLGGSHHGML 311
C + LP + + SQ A G H L + G G LG + L
Sbjct: 280 HGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSL 339
Query: 312 SDPERVSS--TRPLSVALEKVSNLDGVKVI-QIAAGAEHSAVVT 352
+ P+ V P AL + S+ VI QI +G + S V T
Sbjct: 340 NLPQMVIGPWVSPSGSALLQSSDAQIAVVIRQIFSGGDQSIVTT 383
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 157/365 (43%), Gaps = 41/365 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI---GGK 92
VW+WG+ + GQLG G +D P L GGA +A S+ GG
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLP----------GVGGARAVASLDAGSLALLEGGD 337
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V +WG +SGQLG G+ D P V +T + G H+ + G L+ G
Sbjct: 338 VLAWGANNSGQLGDGDTADRSTPSLVPELS----AVTAVVGGAQHALALRKDGTLWAWGG 393
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G GQLGHG H P V N V +A G HSL L+D V+ +G GQ
Sbjct: 394 GLAGQLGHGGSERHVVPATVMGLTN--VTSMATGSFHSLAALED---GSVWAWGRNSYGQ 448
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG R V P GL + V +A G S A++ +G ++TWGR G +T
Sbjct: 449 LGDGTVTERHV--PVRVPGLPSVRAV--AAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTT 504
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
D P ++ S A G +HVL L DG+V G + G L D P+ V
Sbjct: 505 RDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVP 564
Query: 327 LEKVSNLDGVKVIQ-IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
G+ IQ +AAG S + + + TWG G GQLG G ++ P V
Sbjct: 565 --------GLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGL 616
Query: 386 DEFQN 390
+ +N
Sbjct: 617 SDIRN 621
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 166/355 (46%), Gaps = 37/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG G GQLG G + P + L++V+ +A G H LA ++ G V++
Sbjct: 388 LWAWGGGLAGQLGHGGSERHVVPA--TVMGLTNVTSMATGSFHSLA-----ALEDGSVWA 440
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR S GQLG G + + P V ++ ++A +HS V+ G ++T G
Sbjct: 441 WGRNSYGQLGDGTVTERHVPVRVPGLP----SVRAVAAAGHHSIAVAMDGTVWTWGRNAA 496
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G R + PV VS + V IA G H L L D V+ +G GQLG
Sbjct: 497 GQLGDGTTRDRARPVAVSGLTS--VLAIAAGGSHVLALRSD---GDVWAWGYNALGQLGD 551
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST-SDVNCP 272
S D++ V +P GL I+ V +A S AL+ +G ++TWG GF D
Sbjct: 552 GTSGDKLTPVRVP----GLAPIQSV--AAGTYFSMALANDGTVWTWGEGFEGQLGDGGGV 605
Query: 273 QSL-PSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
Q L P ++ ++G H L + GDG V G ++ G L D + P+
Sbjct: 606 QRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPV---- 661
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V NL G+ + + G HS + + + WG +GQLG G ++ P V+
Sbjct: 662 -QVRNLTGITAV--SGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVI 713
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 154/348 (44%), Gaps = 33/348 (9%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWGA + GQLG G LSP+ + +LS ++ +A G H +AL G V++WG
Sbjct: 240 SWGANSFGQLGLGTFTQRLSPE--RIPTLSGITSVAAGTYHAVALGKD-----GTVWTWG 292
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SSGQLG G D P P+ G R + + AG S + + G + G GQ
Sbjct: 293 SNSSGQLGDGTWNDRAVPAPLPGVGGAR-AVASLDAG---SLALLEGGDVLAWGANNSGQ 348
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG GD S+P V V + G +H+L L KD ++ +G G GQLG
Sbjct: 349 LGDGDTADRSTPSLVPEL--SAVTAVVGGAQHALALRKD---GTLWAWGGGLAGQLGHGG 403
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
V P +GL + ++ S A +G ++ WGR G + ++ +
Sbjct: 404 SERHVV--PATVMGL--TNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHV 459
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P +P S A +H + + DG V G + G L D RP++V S
Sbjct: 460 PVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAV-----S 514
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L V+ IAAG H + + + WG+ GQLG G + D++ P
Sbjct: 515 GL--TSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTP 560
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 152/350 (43%), Gaps = 33/350 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG+ + GQLG G D PQ + + V +A G H L L S G V++
Sbjct: 138 VWTWGSNSSGQLGDGTTTDRAEPQ--RVEGFTDVVAVAAGDFHSLVLKSD-----GTVWA 190
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G L+PKPV +G + ++AG++ + V G + + G +F
Sbjct: 191 WGTNFHGQLGQGHTQTGLWPKPVPGLEG----VVALAAGFDFTLAVHADGAVSSWGANSF 246
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + SP ++ + + +A G H++ L KD V+ +GS GQLG
Sbjct: 247 GQLGLGTFTQRLSPERIPTL--SGITSVAAGTYHAVALGKD---GTVWTWGSNSSGQLGD 301
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R+V P +G + + A S AL G + WG G T+D
Sbjct: 302 GTWNDRAVPAPLPGVG-GARAVASLDAG---SLALLEGGDVLAWGANNSGQLGDGDTADR 357
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P +P + + G H L L DG + GG G L P +V
Sbjct: 358 STPSLVPELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATV---- 413
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ V +A G+ HS E+ ++ WG +GQLG G ++ P
Sbjct: 414 ---MGLTNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVP 460
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 163/357 (45%), Gaps = 32/357 (8%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG T GQLG G + PQ ++ LS V +A G +A+ G F
Sbjct: 1038 VWAWGDNTLGQLGDGTSAFTVMWPQ--RVAELSDVESVAAGEQFSVAVAHD-----GTAF 1090
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG GQLG G+ L P V T+ + A H+ + G L GD
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G SSP ++ V ++ G HSL L D V+ +G+ GQLG
Sbjct: 1151 TGQLGDGTTTRRSSPGEIRGVT--RVTAVSTGAWHSLALRLD---GTVWAWGANGFGQLG 1205
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD-VNCP 272
R+V +P GL D +V I+A G S A+ ++G ++TWG F D +
Sbjct: 1206 DGTTTARAVPVP--VQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSES 1261
Query: 273 QSLP---SSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
++LP L QA G + H L L DG V G + G L D R P+
Sbjct: 1262 RALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPV----- 1316
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH--PKVVN 383
++ ++DG + ++ AGA H+ + ++ + TWG HGQLG G T ++ PK V+
Sbjct: 1317 RLKDVDG--LTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVS 1371
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 169/406 (41%), Gaps = 82/406 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA GQ+G G + D L+P+ + +LS V ++A G +H LA+ G V++
Sbjct: 888 VWAWGANASGQVGDGTVEDRLTPR--RIEALSDVMVIALGESHALAVGED-----GTVWA 940
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +SGQLG G +L P V +G + ++AG S V D G + G
Sbjct: 941 WGANASGQLGDGGETPSLLPARVKGLEG----VGSVAAGRAFSLAVRDDGTAWAWGANES 996
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +S P +V+S K + ++ G H++ L +D V+ +G GQLG
Sbjct: 997 GQLGDGSNQSRRVPHRVASV--KGLRAVSAGAHHAMALGED---GAVWAWGDNTLGQLGD 1051
Query: 216 SKDRIRSVSLPQVTIGLHDIE--------------------------------------- 236
+V PQ L D+E
Sbjct: 1052 GTSAF-TVMWPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLS 1110
Query: 237 -------------IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS 277
+V + A G + AL A+G L WG G +T+ + P +
Sbjct: 1111 PAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRG 1170
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ + G H L L DG V G + G L D ++ R + V ++ + +
Sbjct: 1171 VTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGD--GTTTARAVPVPVQGLRD----- 1223
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V+ IAAG HS V + + TWG+ GQLG G + + P V+
Sbjct: 1224 VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVH 1269
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 164/400 (41%), Gaps = 77/400 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D P + +S L+SV +A GG+HVLAL S G V++
Sbjct: 488 VWTWGRNAAGQLGDGTTRDRARP--VAVSGLTSVLAIAAGGSHVLALRSD-----GDVWA 540
Query: 96 WGRGSSGQLGHGEMVDALYPKPV------------TFF------DGHRYT---------- 127
WG + GQLG G D L P V T+F DG +T
Sbjct: 541 WGYNALGQLGDGTSGDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLG 600
Query: 128 ------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
I +IS G H+ V G ++ GD GQLG G + +P
Sbjct: 601 DGGGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAP 660
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V+V + + ++ G HSL L D V +GS GQLG + S LP V
Sbjct: 661 VQVRNLT--GITAVSGGRSHSLALHAD---GTVRAWGSNGYGQLG--DGTLTSRVLPSVI 713
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQ 283
GL I+ + AL A+ L WG G + P + +
Sbjct: 714 PGLSGIQA--LHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGRVER 771
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ-IA 342
A G H L++ DG V+ G + G L D R ++V GV + +A
Sbjct: 772 LAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTV--------RGVSCARSVA 823
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+G +HS V+ + + TWG + GQLG G T ++ P V
Sbjct: 824 SGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRV 863
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 154/356 (43%), Gaps = 33/356 (9%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
SWG+ GQLG G+ LSP + + S +V + G H +AL + G + +
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMAD-----GTLQA 1145
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG G P + +T +S G HS + G ++ G F
Sbjct: 1146 WGDNATGQLGDGTTTRRSSPGEIRGV----TRVTAVSTGAWHSLALRLDGTVWAWGANGF 1201
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + + PV V ++V IA G HS+ + D V+ +G GQLG
Sbjct: 1202 GQLGDGTTTARAVPVPVQGL--RDVVAIAAGGYHSVAVRSD---GTVWTWGYNTFGQLGD 1256
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR------GFNSTSD 268
R+ LP + +H +E V GD S AL A+G + WG G S +D
Sbjct: 1257 GTSESRA--LP---VQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P L ++ G H + L DG V G + HG L D V+ R + + +
Sbjct: 1312 RYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGD--GVTGPR-MRLVPK 1368
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
VS L I AGA HS TWG HGQLG+G+ + P+ + L
Sbjct: 1369 PVSGLP--AATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKL 1422
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 151/360 (41%), Gaps = 45/360 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQLG G SP + ++ V+ ++ G H LAL + G V++WG
Sbjct: 1145 AWGDNATGQLGDGTTTRRSSPG--EIRGVTRVTAVSTGAWHSLALR-----LDGTVWAWG 1197
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G P PV + I+AG HS V G ++T G TFGQ
Sbjct: 1198 ANGFGQLGDGTTTARAVPVPVQGL----RDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQ 1253
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
LG G S + PV+V + V + G HSL L D V G+G GQLG
Sbjct: 1254 LGDGTSESRALPVQVHKL--EGVQAVTGGDHHSLALHAD---GTVSGWGHNASGQLGDGS 1308
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQ 273
DR V L V GL ++ A + AL +G ++TWG + V P+
Sbjct: 1309 RTDRYTPVRLKDVD-GLTEVR-----AGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPR 1362
Query: 274 ---------SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
LP++ + A H + G + HG L + P
Sbjct: 1363 MRLVPKPVSGLPAATAIGAGAW---HSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEP-- 1417
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L G+KVI A GA+ S +T+ +M+WG HG LGLG + P V L
Sbjct: 1418 ---QRMKLLSGLKVI--AGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLL 1472
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 156/357 (43%), Gaps = 40/357 (11%)
Query: 36 VWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG + GQLG LSP L + L + + G AH LAL + G V+
Sbjct: 87 VWAWGGNSAGQLGGADTSFQRLSPARLPV--LEDIVSVVSGDAHSLALGAD-----GTVW 139
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SSGQLG G D P+ V F + ++AG HS + G ++ G
Sbjct: 140 TWGSNSSGQLGDGTTTDRAEPQRVEGF----TDVVAVAAGDFHSLVLKSDGTVWAWGTNF 195
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G ++ P V + V +A G +L + D V +G+ GQLG
Sbjct: 196 HGQLGQGHTQTGLWPKPVPGL--EGVVALAAGFDFTLAVHAD---GAVSSWGANSFGQLG 250
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ R+ +P ++ I ++A + AL +G ++TWG G +
Sbjct: 251 LGTFTQRLSPERIPTLS------GITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTW 304
Query: 267 SDVNCPQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+D P LP + + A+L + +L G G+VL G ++ G L D + + P
Sbjct: 305 NDRAVPAPLPGVGGARAVASLDAGSLALLEG-GDVLAWGANNSGQLGDGDTADRSTP--- 360
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L V + GA+H+ + ++ + WG G GQLG G + + P V
Sbjct: 361 --SLVPELS--AVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATV 413
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 151/356 (42%), Gaps = 36/356 (10%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WGA GQLG G + + + +S +A GG H L L G V++WG
Sbjct: 790 AWGANASGQLGDGGTTH--GARAVTVRGVSCARSVASGGQHSLVLACD-----GTVWTWG 842
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G + P V +G I ++ G + S + G ++ G GQ
Sbjct: 843 ENQRGQLGDGTTSARVAPGRVEGLEG----IVAVAGGGDTSLALRSDGTVWAWGANASGQ 898
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
+G G +P ++ + +V IA G H+L + +D V+ +G+ GQLG
Sbjct: 899 VGDGTVEDRLTPRRIEAL--SDVMVIALGESHALAVGED---GTVWAWGANASGQLG--- 950
Query: 218 DRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
D + SL P GL + V +A S A+ +G + WG G S
Sbjct: 951 DGGETPSLLPARVKGLEGVGSV--AAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRR 1008
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL-EK 329
P + S + G +H + L DG V G + G L D T +V ++
Sbjct: 1009 VPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGD-----GTSAFTVMWPQR 1063
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
V+ L V+ +AAG + S V + +WG E+GQLG G T ++ P V +G
Sbjct: 1064 VAELSDVE--SVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIG 1117
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 32/333 (9%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM-VDALYP 115
+ Q + L+ S +A G H L LT P+ G V++WG S+GQLG + L P
Sbjct: 56 AAQAIRLAEPLSPMRIAAGAQHSLFLT-PT----GAVWAWGGNSAGQLGGADTSFQRLSP 110
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
+ + I + +G HS + G ++T G + GQLG G + P +V F
Sbjct: 111 ARLPVLE----DIVSVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF 166
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+V +A G HSLVL D V+ +G+ GQLG + ++ P+ GL
Sbjct: 167 T--DVVAVAAGDFHSLVLKSD---GTVWAWGTNFHGQLG--QGHTQTGLWPKPVPGLEG- 218
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN 289
+V ++A D + A+ A+G + +WG G + + P+ +P+ + A G
Sbjct: 219 -VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAAGTY 277
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + L DG V G + G L D + R + L V V + S
Sbjct: 278 HAVALGKDGTVWTWGSNSSGQLGD--GTWNDRAVPAPLPGVGGARAVASLDAG-----SL 330
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ E ++ WG GQLG G+T D+ P +V
Sbjct: 331 ALLEGGDVLAWGANNSGQLGDGDTADRSTPSLV 363
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 118/232 (50%), Gaps = 21/232 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++S+G G G LG L D PQ LNL +ACG H LALT I G +F
Sbjct: 41 QLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQ--KFVQVACGATHSLALT-----ISGIIF 93
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG+ GQLGHG D L PK V D +I G HS FVS + L+T G+G
Sbjct: 94 SWGKNLRGQLGHGNQNDCLKPKEVIQND---IIAEYIDCGDQHSAFVSKNKELYTWGNGQ 150
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+ +LGHG P KV + V ++CGM H+L++ + VY +G G G+LG
Sbjct: 151 YYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGF---VYAWGDGMYGKLG 207
Query: 215 VSKDRIRSVSLPQVTIGL------HDIEIVGISANGDRSAALSAEGHLYTWG 260
VS+D ++ +LP +G+ + ++A S ALS G ++TWG
Sbjct: 208 VSED-CKTQTLP-TRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWG 257
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN--KNVHQIAC 185
I +I+ G +H+ + ++ L++ G G G LG+ H VK+ +N + Q+AC
Sbjct: 23 IIYIACGHHHTLIIDENNQLYSFGMGKTGLLGN----EHLEDVKIPQQLNLKQKFVQVAC 78
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G HSL L + ++ +G RGQLG D ++ + Q +DI I
Sbjct: 79 GATHSLAL---TISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-----NDIIAEYIDCG 130
Query: 244 GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
SA +S LYTWG G T+D P+ + + + G NH L++T
Sbjct: 131 DQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT 190
Query: 296 GDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G+G V G +G L E + T P V + Q+AAG+ HS ++ N
Sbjct: 191 GEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTN 250
Query: 355 RAIMTWGWGEHGQLGLGNTCD----QIHPKVVNLGDEFQNRDTQLEVF 398
I TWG + G LG+G D P+ +++ N+D L+ F
Sbjct: 251 GQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISIK---LNKDKNLQFF 295
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQ 283
+ L D EI+ I+ + + LY++G G DV PQ L F Q
Sbjct: 16 LELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKFVQ 75
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H L LT G + G + G L + +P V + + I
Sbjct: 76 VACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ------NDIIAEYIDC 129
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDT----QLEVF 398
G +HSA V++N+ + TWG G++ +LG G T D++ P KVV L D + + +
Sbjct: 130 GDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIV 189
Query: 399 CGSGFTYA 406
G GF YA
Sbjct: 190 TGEGFVYA 197
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 52 LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
L+D P + + + ++C H +A++ G+ + WG+ QLG G +
Sbjct: 413 LNDFNRPFQIQYFKNNIIRYISCSYLHAIAISQK-----GQAYVWGKNIYYQLGVGYSCN 467
Query: 112 ALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
Y P+ + + TI + S ++D G ++T G G LGH + + P
Sbjct: 468 YNYIPQKLQGILETK-TIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPE 526
Query: 171 -KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
K+ + + + ++ IACG + + + Q+Y +G+ GQLG+ R
Sbjct: 527 PKMVNDIPQMIY-IACGPQGMVSI--SAHKRQLYAWGNNIYGQLGIKIYR 573
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 181/388 (46%), Gaps = 75/388 (19%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G+LG G P+L+ S+ +V +ACG H A+T+ G +
Sbjct: 305 AEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITAT-----GDL 359
Query: 94 FSWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ +G LGHG V PK V+ +G ++ +S G H+ ++ SG L+T
Sbjct: 360 YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEG--LQVSAVSCGTWHTALITSSGKLYTF 417
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYG 204
GDGTFG LGHG+ + S P +V S ++CG+ H+ +++ + +++
Sbjct: 418 GDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFT 477
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+G G + +LG +GDRS+ L
Sbjct: 478 WGDGDKYRLG----------------------------HGDRSSKLK------------- 496
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P +PS +F +A G + LT G + G S +G L +P + R
Sbjct: 497 -------PTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPN--NDGRY 547
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ EK L G V+++ GA H AV+T++ + TWG G +G+LG G+ D+ P V
Sbjct: 548 PRLVEEK---LGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFV 604
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++R + + CGSGFT AI +H
Sbjct: 605 ---EALRDRSVK-RIACGSGFTAAICQH 628
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V++WG G +G+LG G + D +P + SV +ACG A+ SV G
Sbjct: 578 EVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSG 633
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 172/380 (45%), Gaps = 59/380 (15%)
Query: 35 KVWSWGAGTDGQLGTG---RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVI 89
++++WG + GQLG G R PQ LSSL V + LACGG H AL+ +
Sbjct: 162 RIFAWGDNSFGQLGIGAPGRTLYRDHPQ--QLSSLPGVPIRRLACGGWHSFALS-----V 214
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G VF WG+ + GQLG G D + P P+ + + +I+ G N++ ++ SG LF
Sbjct: 215 SGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQ--VKYIACGQNYTAILTASGGLFL 272
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G+ GQLGHG + + +P V F+ + Q+ACG +H+LVL + + + G G
Sbjct: 273 FGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL--EGRTGRFFSLGQGS 330
Query: 210 RGQLGVSKDRIRSVS--------LPQVTIGLHDIE----IVG-ISANGDRSAALSAEG-- 254
+GQLG+ D +S + P T G + E I+G I A GD+S + + G
Sbjct: 331 KGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRGND 390
Query: 255 --HLYTWGRGFNSTSDVNCPQSL------------PSS------LSFSQAALGWNHVLVL 294
H + S V + L PS ++ S A LV
Sbjct: 391 PDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVG 450
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G G + + G G L + P S V + G ++ Q+A G +H+ +V E
Sbjct: 451 AGSGGLFLFGQGSEGQLGHGSHSNEVNPRS-----VKDFLGNEITQVACGRQHT-LVLEG 504
Query: 355 RA--IMTWGWGEHGQLGLGN 372
R + G G GQLGL N
Sbjct: 505 RTGGFYSLGQGSKGQLGLDN 524
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 151/356 (42%), Gaps = 35/356 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDEL----SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
+ V+SWG DGQLG L D++ SP+ + + + ++CG H L +
Sbjct: 1 MSVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVL-----LR 55
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V G GQLG L P T IT +S G +H+ V+D G +
Sbjct: 56 DGTVMMCGANDRGQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLG 111
Query: 150 CGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G GQ G GD P + S + V Q+ACG HS+ L +D +++ +G
Sbjct: 112 WGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRD---GRIFAWGD 168
Query: 208 GKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
GQLG+ + R PQ L + I ++ G S ALS G ++ WG+
Sbjct: 169 NSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQ 228
Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G +T D P L + + A G N+ +LT G + + G G L +
Sbjct: 229 LGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSN 288
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA--IMTWGWGEHGQLGLGN 372
P S V G ++ Q+A G +H+ +V E R + G G GQLGL N
Sbjct: 289 EVNPRS-----VQGFLGSEITQVACGRQHT-LVLEGRTGRFFSLGQGSKGQLGLDN 338
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 30/271 (11%)
Query: 152 DGTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
DG G G GD S SSP +V + K + +I+CG+RH+ VLL+D V G+ R
Sbjct: 11 DGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRD---GTVMMCGANDR 67
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG + +P + I +S D + A++ G + WGR G +
Sbjct: 68 GQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLS 123
Query: 265 S--TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPER-V 317
+ + D P+ L SS +Q A G H + LT DG + G + G L P R +
Sbjct: 124 TGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTL 183
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P +++S+L GV + ++A G HS ++ + A+ WG GQLGLG T D++
Sbjct: 184 YRDHP-----QQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRV 238
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P + + + + + CG +T ++
Sbjct: 239 SPTPLK---NLKTKQVKY-IACGQNYTAILT 265
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG LF G G+ GQLGHG + + +P V F+ + Q+ACG +H+LVL G Y
Sbjct: 453 SGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGG--FY 510
Query: 204 GFGSGKRGQLGVSKDRIRSVS--------LPQVTIGLHDIE----IVG-ISANGDRSAAL 250
G G +GQLG+ +S + P T G + E I+G I A GD+S +
Sbjct: 511 SLGQGSKGQLGLDNGSSKSCASLVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCI 570
Query: 251 SAEGHL 256
+ G++
Sbjct: 571 VSRGNI 576
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 179/384 (46%), Gaps = 74/384 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P L+ ++S+V +ACG H A+T+ G+++
Sbjct: 112 EVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTT-----AGELY 166
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG + PK ++ +G + + ++S G H+ ++ +G LFT G
Sbjct: 167 TWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQ--VAYVSCGTWHTALITSTGQLFTFG 224
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHG+ S P +V S +ACG+ H+ +++ + +++
Sbjct: 225 DGTFGVLGHGNRESIPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLF 284
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ +
Sbjct: 285 TWGDGDKHRLG----------------------------HGDKEPRVKP----------- 305
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
C SL F + A G + + LT G+V +G + +G L +P R P
Sbjct: 306 ------TCVASL-IDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNP-RSDGKLPC 357
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V ++ G V+Q+A G+ H AV+T + TWG G +G+LG G+ D+ P +V
Sbjct: 358 LV-----EDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVE 412
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAI 407
+ ++R + + CG+ FT AI
Sbjct: 413 V---LRDRGVR-HIACGANFTAAI 432
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 161/357 (45%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + QIACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ ++S S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 143/302 (47%), Gaps = 26/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDTD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L DI+IV I+ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-EYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
F S + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 173 FELKSQ-SAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P+
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 381 VV 382
V
Sbjct: 287 KV 288
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 26/271 (9%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T + + P+++ S + Q A G+ H L L+ EV G + HG L + S
Sbjct: 118 LPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKS 177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
A + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+ P
Sbjct: 178 QS----APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP 233
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
NL +++ + + CG T A+++
Sbjct: 234 ---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+SWG GQLG G L + +PQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SL+ + + +ACG H LAL+ G
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIKVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E+ P+ + G + ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG S GQ G G + + P+P + H + ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLGH S P ++ + +++ +ACG HSL L Q++ +G+G GQ
Sbjct: 61 NTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGESHSLALSDQ---GQLFSWGAGSDGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG++ +V++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172
Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ PS S +Q A G H L+ G V G + G L +
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRR 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 153/357 (42%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G G + PQ+ +V +ACGG H + L G+V++
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + GQLGH + P+ + G I H++ G +HS +SD G LF+ G G+ G
Sbjct: 59 GLNTKGQLGHD--CEGSKPEQIGALAGQH--IVHVACGESHSLALSDQGQLFSWGAGSDG 114
Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG + P + + + Q++CG H L L D Q + +G GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
K+ S PQ L I + ++A G S ALS G ++ WG+ G + D
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230
Query: 270 NCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G H VLT G V G G L P
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ SSGQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG + GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G ++ I+ G +H+ FV SG ++ G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 164/360 (45%), Gaps = 40/360 (11%)
Query: 48 GTGRLHDELS------PQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGS 100
G R+H S PQ +++L+ LS + ++ CG HVLAL + GK+ SWGRG
Sbjct: 84 GATRIHGRFSTYNSQRPQEVVSLAGLS-IKLITCGSDHVLALDA-----SGKIRSWGRGE 137
Query: 101 SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
SGQLGH + P + R + ++ G S + + G L+T G +GQLG
Sbjct: 138 SGQLGHASFSHSSTPSIIDELASQR--VKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQ 195
Query: 161 GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
GD S + P + S +++VH +ACG H +VL VY +G+ GQLG R
Sbjct: 196 GDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVL---TTSRDVYTWGNNSYGQLG-HGFRK 251
Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQS 274
+ P+ + ++I I A + S +++ G +YTWGR G + P
Sbjct: 252 KHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTL 311
Query: 275 LPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLS---DPERVSSTR-PLSVAL 327
L +QA+L G + ++ +T G V G + G L D S R P V
Sbjct: 312 LSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVIS 371
Query: 328 EKVSNL-------DGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHP 379
K+ + D + + I+ G+ H +TE + + WG GEHGQLGL P
Sbjct: 372 PKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRP 431
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 160/394 (40%), Gaps = 72/394 (18%)
Query: 7 EETEKGKSALINNAKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTG 50
E + G ++ +++ P I +E Q+V +V ++WG GQLG G
Sbjct: 137 ESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQG 196
Query: 51 RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EM 109
P++L + V ++ACG AH++ LT+ V++WG S GQLGHG
Sbjct: 197 DRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTT-----SRDVYTWGNNSYGQLGHGFRK 251
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
L PK V G I I AG NHS ++ G ++T G G FGQLGHGD S P
Sbjct: 252 KHCLQPKSVRVMSG--LDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIP 309
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQ 227
+S K Q + + + ++ VY +G GQL GV +S P
Sbjct: 310 TLLSPLDPKT--QASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPS 367
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG 287
I I S D ++S S + G
Sbjct: 368 DVISPKIISFFAASEEHD--------------------------------AISLSSISCG 395
Query: 288 WNHVLVLTGDGEVLML-GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
+HVL +T + L G HG L R +S RP+ ++V + G+ V+ A
Sbjct: 396 SHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIP---QEVKKMKGMIVLAAACSEN 452
Query: 347 HSAVVTE--------NRAIMTWGWGEHGQLGLGN 372
HS VV + + +WG G GQLG G+
Sbjct: 453 HSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGS 486
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WG G GQLG G + + P LL+ L + S++ G ++A+T G V+
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMT-----YSGAVY 341
Query: 95 SWGRGSSGQLGHGEMV----------DALYPKPVTFFDGHR----YTITHISAGWNHSGF 140
SWGR GQLGHG + D + PK ++FF +++ IS G +H
Sbjct: 342 SWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLA 401
Query: 141 VSDS-GCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL--- 194
+++ LF G G GQLG D P +V V AC HS+V+
Sbjct: 402 ITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMP 461
Query: 195 -KDCLGN-QVYGFGSGKRGQLGVSKDRI 220
G+ +V+ +G G GQLG ++
Sbjct: 462 GSGPKGDMKVFSWGRGSFGQLGYGSGKV 489
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 262 GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G ST + PQ + S LS G +HVL L G++ G G L S
Sbjct: 90 GRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS 149
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ P + L +V ++A G SA + E + TWG +GQLG G+ P
Sbjct: 150 STP-----SIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIP 204
Query: 380 KVV 382
+++
Sbjct: 205 RML 207
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
HG S +S RP ++V +L G+ + I G++H + + I +WG GE GQ
Sbjct: 89 HGRFST---YNSQRP-----QEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQ 140
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
LG + P ++ DE ++ + EV CG F+ A+
Sbjct: 141 LGHASFSHSSTPSII---DELASQRVK-EVACGVAFSAAL 176
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 163/360 (45%), Gaps = 31/360 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +WG + GQ G G +P + L ++V+ +A H LALTS G V
Sbjct: 56 TILAWGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSV-----GTVL 110
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G + P PV G T+T I+AG +HS ++ +G +F GD
Sbjct: 111 AWGGNSFGQLGDGTTASSRTPVPVRLPVG--TTVTAIAAGTSHSLAITATGAVFAWGDNA 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
GQLG G S PV V V V IA G+ HSL + +GS GQL
Sbjct: 169 VGQLGDGTTTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVAST---GATLAWGSNAFGQLG 225
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
G + +++PQ+ + ++A S AL++ G +Y WG G ST
Sbjct: 226 DGTTTGSSTPITVPQLP------TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGST 279
Query: 267 SDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
SD + P + +P+ + + G +H L LT G L G + G L + V S+ P++
Sbjct: 280 SDSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVA 339
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V + + L V + + +H+ VT + W GQLG G T D P V+L
Sbjct: 340 VRVPGGATLTAVAIHR-----DHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSL 394
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 132/309 (42%), Gaps = 20/309 (6%)
Query: 83 TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
T ++V + +WG S GQ G+G + P PV G T+T I+ HS ++
Sbjct: 47 TPTAAVATDTILAWGDNSFGQFGNGTTASSRTPVPVRLPVG--TTVTAIAGSDTHSLALT 104
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G + G +FGQLG G S +PV V V V IA G HSL + V
Sbjct: 105 SVGTVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITAT---GAV 161
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ +G GQLG S+ +P ++ +G + I+ S A+++ G WG
Sbjct: 162 FAWGDNAVGQLGDGTTTDSSLPVPVRLPVG---TTVTAIAGGLGHSLAVASTGATLAWGS 218
Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
G +T+ + P ++P + + A G H L LT G V G + G L D
Sbjct: 219 NAFGQLGDGTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGS 278
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
S+ P++V + G + +GA+HS +T + WG GQLG G T
Sbjct: 279 TSDSSTPIAVRVPA-----GTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVG 333
Query: 376 QIHPKVVNL 384
P V +
Sbjct: 334 SSTPVAVRV 342
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 128/319 (40%), Gaps = 72/319 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG + GQLG G +P + L ++V+ +A G +H LA+T+ G VF
Sbjct: 108 TVLAWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITA-----TGAVF 162
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G D+ P PV G T+T I+ G HS V+ +G G
Sbjct: 163 AWGDNAVGQLGDGTTTDSSLPVPVRLPVG--TTVTAIAGGLGHSLAVASTGATLAWGSNA 220
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
FGQLG G S+P+ V V +A G HSL L VY +G+ GQL
Sbjct: 221 FGQLGDGTTTGSSTPITVPQL--PTVTAVAAGDVHSLALTST---GTVYAWGANSFGQLG 275
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIV---------------------------------- 238
G + D +++ +V G +V
Sbjct: 276 DGSTSDSSTPIAV-RVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGS 334
Query: 239 ---------------GISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQ--SL 275
++ + D + A+++ W R G +T+D + P SL
Sbjct: 335 STPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPVAVSL 394
Query: 276 PSSLSFSQAALGWNHVLVL 294
P+ + + A+G +H L L
Sbjct: 395 PAGTAITAVAVGDDHSLAL 413
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 7/161 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WGA + GQLG G D +P + + + ++ + + G H S + G
Sbjct: 262 TVYAWGANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADH-----SLALTAAGGAL 316
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG+G V + P V G T+T ++ +H+ V+ +
Sbjct: 317 AWGDNGQGQLGNGATVGSSTPVAVRVPGG--ATLTAVAIHRDHAVAVTSTATALAWSRNN 374
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
GQLG+G S PV VS + +A G HSL L+
Sbjct: 375 EGQLGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLALVD 415
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 156/333 (46%), Gaps = 37/333 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSS 87
V + G G+ G+LG G D L L+ +S++ + +CG H +ALT
Sbjct: 2694 VLACGEGSYGRLGQGNSDD-----LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE--- 2745
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+VFSWG G G+LGHG P+ + G + +S G+ HS V+ G L
Sbjct: 2746 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKL 2801
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G+G +G+LG G+ + P +V++ + Q+ACG+ H+L + D G+ V+ FG
Sbjct: 2802 FTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGD 2859
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
G G+LG+ +S PQ L I I ++ S AL+ +GH+YT+G+
Sbjct: 2860 GDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 2917
Query: 264 --NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ N PQ +P + + A+G H L L G+V G + G L
Sbjct: 2918 PEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 2977
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P V + L G + QI+AG HSA T
Sbjct: 2978 REPTLVTV-----LQGKNIRQISAGRCHSAAWT 3005
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 2645 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 2695
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 2696 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2755
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 2756 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 2812
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 2813 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 2871 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 2928
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 2929 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 2985
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V ++CG H +TS GK+F
Sbjct: 2748 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS-----DGKLF 2802
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + P+ VT +G Y I ++ G NH+ VS D ++ GDG
Sbjct: 2803 TFGNGDYGRLGLGNTSNKKLPERVTALEG--YQIGQVACGLNHTLAVSADGSMVWAFGDG 2860
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + SSP KV + ++ACG + S+ L KD VY FG + +
Sbjct: 2861 DYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD---GHVYTFGQDRL--I 2915
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+ + R R+ + PQ L + I ++ + + AL++ G +Y WG
Sbjct: 2916 GLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 2962
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 2793
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 2794 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 2848
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 161/357 (45%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + QIACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ ++S S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GFE-LKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 143/302 (47%), Gaps = 26/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDTD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L DI+IV I+ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-EYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
F S + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 173 FELKSQ-SAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P+
Sbjct: 232 VP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 381 VV 382
V
Sbjct: 287 KV 288
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 26/271 (9%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T + + P+++ S + Q A G+ H L L+ EV G + HG L + S
Sbjct: 118 LPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKS 177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
A + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+ P
Sbjct: 178 QS----APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP 233
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
NL +++ + + CG T A+++
Sbjct: 234 ---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+SWG GQLG G L + +PQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SL+ + + +ACG H LAL+ G
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIKVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E+ P+ + G + ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 169/387 (43%), Gaps = 72/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D PQL+ + S+ ++ACG H A+T + G ++
Sbjct: 329 EVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT-----LSGDLY 383
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+WG G S G LGHG + PK V + I+ G H+ V+ +G LFT GD
Sbjct: 384 TWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACGPWHTAVVTTAGQLFTFGD 442
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVY 203
GTFG LGH D +S SP +V S + ACG+ H+ +++ +G+ +++
Sbjct: 443 GTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLF 502
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G +G+LG R V P L D
Sbjct: 503 TWGDGDKGRLGHGDKEQRLV--PTCVAALVD----------------------------- 531
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+F + A G + + LT GEV +G S G L DP+ + L
Sbjct: 532 ---------------HNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQ---ADGKL 573
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+E L V IA GA H A VT + TWG G +G+LG G+ D+ P +V
Sbjct: 574 PGMVE--GRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVE 631
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
E Q + + CG+ FT A+ H
Sbjct: 632 ALKEKQVKS----IACGATFTAAVCLH 654
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 129/340 (37%), Gaps = 79/340 (23%)
Query: 91 GKVFSWGRGS--------SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
G V+ WG G S ++G G ++ P P + +++ G H+ V+
Sbjct: 266 GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVACGGKHAALVT 325
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G +FT G+ + G+LGHG S P V + + +ACG H + L +
Sbjct: 326 KQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT---LSGDL 382
Query: 203 YGFGSGKR--GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
Y +G G G LG D I +V L ++ + I+ +A ++ G L+T+G
Sbjct: 383 YTWGDGTHSLGLLGHGND-ISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFG 441
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
G G+L +R S+
Sbjct: 442 DGT--------------------------------------------FGVLGHNDRQSAY 457
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE------------NRAIMTWGWGEHGQL 368
P +V +L G++ ++ A G H+A V E + + TWG G+ G+L
Sbjct: 458 SP-----REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRL 512
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G G+ ++ P V + R +V CG T A++
Sbjct: 513 GHGDKEQRLVPTCVAALVDHNFR----KVACGHSLTVALT 548
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 37/365 (10%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
SV + CGG H LT G++F+WGRG G+LGHG P+ + +G
Sbjct: 272 SVQQVCCGGQHAAVLTDC-----GEIFTWGRGGFGRLGHGNREGLESPRRIEALEG--IP 324
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G+ ++ V+ SG L+T G G G+LG GD +P +V +K V ++ G
Sbjct: 325 CVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSK-VKEVYAGS 383
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDR 246
HS VL ++ VY FG + G +D + +P + G + + + G
Sbjct: 384 VHSCVLTRE---GTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYH 440
Query: 247 SAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSS--------LSFSQAALGW 288
+ AL+ +G +Y WG F ++ LPS ++ + GW
Sbjct: 441 TMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGW 500
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTR---PLSVALEKVSNLDGVKVIQIAA 343
H LT DG++ + G ++ G L P+ P + L +K+ QIA
Sbjct: 501 GHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIAC 560
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
G EHS V EN + ++G G+ GQLG +T + P++V R + V CG+
Sbjct: 561 GGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALK--STRREIMHVACGNNC 618
Query: 404 TYAIS 408
T ++
Sbjct: 619 TLVLA 623
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 145/354 (40%), Gaps = 43/354 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G SP+ + +ACG A+ A+T+ G+++
Sbjct: 291 EIFTWGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTA-----SGELY 345
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G +G+LG G++ D P V +G + + AG HS ++ G ++ G
Sbjct: 346 TWGAGENGRLGLGDVADRHTPSRV---EGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHE 402
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKN---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GHGD+ P + +F + V QI+ G + C G QVY +G +
Sbjct: 403 Y--TGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQG-QVYAWGHNRVA 459
Query: 212 QLGVSKDRIRSVSL--------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
QLG+ ++ PQ+ L + IV + A SAAL+ +G LY GR +
Sbjct: 460 QLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNY 519
Query: 264 NSTSDVNCPQSLPSS------------------LSFSQAALGWNHVLVLTGDGEVLMLGG 305
+ PQ P + L Q A G H + + +GEV G
Sbjct: 520 QGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGA 579
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G L P V K + + ++ +A G + V+ A T
Sbjct: 580 GQKGQLGHESTTREDFPRLVQALKSTRRE---IMHVACGNNCTLVLAGGVAFPT 630
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
LS Q G H VLT GE+ G G L R P ++ L+G+
Sbjct: 271 LSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESP-----RRIEALEGIPC 325
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEV 397
+Q+A G ++A VT + + TWG GE+G+LGLG+ D+ P +V L + + EV
Sbjct: 326 VQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVK------EV 379
Query: 398 FCGS---------GFTYAISRH 410
+ GS G YA +H
Sbjct: 380 YAGSVHSCVLTREGTVYAFGKH 401
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 172/360 (47%), Gaps = 42/360 (11%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG HV +T G+VF+WG S G+LGHG D P V F + + +
Sbjct: 269 IACGVRHVALVTR-----QGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVN--NVDFV 321
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMR 188
+ G H+ VS SG LFT GDGT G LGHG SH P +VS V +ACG
Sbjct: 322 ACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTW 381
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANG 244
HS + + +++ FG G G LG DR SV P Q+ GL I++ G+
Sbjct: 382 HSALATSN---GKLFTFGDGTFGVLG-HGDR-ESVPYPREVQILSGLKTIKVACGVWHTA 436
Query: 245 DRSAALSAEG------HLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNH 290
+S G L+TWG G ++ LP+ +S F Q A G
Sbjct: 437 AIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTM 496
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT G V +GG+ +G L +P +S R + +K L G V +I+ GA H AV
Sbjct: 497 TVALTTSGHVFTMGGTAYGQLGNP--LSDGRLPCLVQDK---LVGEFVEEISCGAYHVAV 551
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T + TWG G +G+LG G+T D+ P V + ++R+ + + CGS FT +I H
Sbjct: 552 LTSRSEVFTWGRGANGRLGHGDTEDRRSPTFV---EALKDRNVK-SISCGSNFTASICIH 607
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 150/321 (46%), Gaps = 29/321 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G +D P L+ ++++V +ACG H A+++ G +F
Sbjct: 284 EVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVST-----SGDLF 338
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK V+ +G + ++ G HS + +G LFT G
Sbjct: 339 TWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEG--LQVLSVACGTWHSALATSNGKLFTFG 396
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD S P +V ++ACG+ H+ +++ + +++
Sbjct: 397 DGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFT 456
Query: 205 FGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT----- 258
+G G + +LG SK+ + LP L D ++ + AL+ GH++T
Sbjct: 457 WGDGDKHRLGHGSKE---TYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTA 513
Query: 259 WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+G+ N SD P + L + + G HV VLT EV G +G L +
Sbjct: 514 YGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGD 573
Query: 316 RVSSTRPLSVALEKVSNLDGV 336
P V K N+ +
Sbjct: 574 TEDRRSPTFVEALKDRNVKSI 594
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + LACG +ALT+ G VF
Sbjct: 453 KLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTT-----SGHVF 507
Query: 95 SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G + GQLG+ G + + K V F + IS G H ++ +FT
Sbjct: 508 TMGGTAYGQLGNPLSDGRLPCLVQDKLVGEF------VEEISCGAYHVAVLTSRSEVFTW 561
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FG 206
G G G+LGHGD SP V + ++NV I+CG + + C+ V G
Sbjct: 562 GRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI---CIHKWVSGADQSVC 618
Query: 207 SGKRGQLGVSKDR 219
SG R G ++ R
Sbjct: 619 SGCRQAFGFTRKR 631
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 118/302 (39%), Gaps = 77/302 (25%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G Y I+ G H V+ G +FT G+ + G+LGHG S P V NV
Sbjct: 261 GDVYVWGEIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDF 320
Query: 183 IACGMRHSLVLLK--DCLGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIE 236
+ACG H+ + D +G G+ G LG VS + VS P L ++
Sbjct: 321 VACGEYHTCAVSTSGDLF---TWGDGTHNAGLLGHGTEVSHWIPKRVSGP-----LEGLQ 372
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
++ ++ SA ++ G L+T+ G
Sbjct: 373 VLSVACGTWHSALATSNGKLFTF------------------------------------G 396
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE--- 353
DG +LG HG D E V R + + L G+K I++A G H+A + E
Sbjct: 397 DGTFGVLG---HG---DRESVPYPREVQI-------LSGLKTIKVACGVWHTAAIIEVMS 443
Query: 354 -------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+R + TWG G+ +LG G+ + P V+ ++ ++ CG T A
Sbjct: 444 QSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH----QLACGHTMTVA 499
Query: 407 IS 408
++
Sbjct: 500 LT 501
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 169/387 (43%), Gaps = 72/387 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D PQL+ + S+ ++ACG H A+T + G ++
Sbjct: 329 EVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT-----LSGDLY 383
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+WG G S G LGHG + PK V + I+ G H+ V+ +G LFT GD
Sbjct: 384 TWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACGPWHTAVVTTAGQLFTFGD 442
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QVY 203
GTFG LGH D +S SP +V S + ACG+ H+ +++ +G+ +++
Sbjct: 443 GTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLF 502
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G +G+LG R V P L D
Sbjct: 503 TWGDGDKGRLGHGDKEQRLV--PTCVAALVD----------------------------- 531
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+F + A G + + LT GEV +G S G L DP+ + L
Sbjct: 532 ---------------HNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQ---ADGKL 573
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+E L V IA GA H A VT + TWG G +G+LG G+ D+ P +V
Sbjct: 574 PGMVE--GRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVE 631
Query: 384 LGDEFQNRDTQLEVFCGSGFTYAISRH 410
E Q + + CG+ FT A+ H
Sbjct: 632 ALKEKQVKS----IACGATFTAAVCLH 654
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 129/340 (37%), Gaps = 79/340 (23%)
Query: 91 GKVFSWGRGS--------SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
G V+ WG G S ++G G ++ P P + +++ G H+ V+
Sbjct: 266 GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVACGGKHAALVT 325
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G +FT G+ + G+LGHG S P V + + +ACG H + L +
Sbjct: 326 KQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAV---TLSGDL 382
Query: 203 YGFGSGKR--GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
Y +G G G LG D I +V L ++ + I+ +A ++ G L+T+G
Sbjct: 383 YTWGDGTHSLGLLGHGND-ISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFG 441
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
G G+L +R S+
Sbjct: 442 DGT--------------------------------------------FGVLGHNDRQSAY 457
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE------------NRAIMTWGWGEHGQL 368
P +V +L G++ ++ A G H+A V E + + TWG G+ G+L
Sbjct: 458 SP-----REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRL 512
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G G+ ++ P V + R +V CG T A++
Sbjct: 513 GHGDKEQRLVPTCVAALVDHNFR----KVACGHSLTVALT 548
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG S GQ G G + + P+P + H + ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLGH S P + + +++ +ACG HS+ L QV+ +G+G GQ
Sbjct: 61 NTKGQLGHES--EGSKPEPIGALAGQHIVHVACGESHSVALSDQ---GQVFSWGAGSDGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG++ +V++P++ L+ I+ IS AL+A+G +TWG+ NS +
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172
Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ PS S +Q A G H L+ G V G + G L +
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRR 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G G + PQ+ +V +ACGG H + L G+V++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + GQLGH + P+P+ G I H++ G +HS +SD G +F+ G G+ G
Sbjct: 59 GLNTKGQLGHES--EGSKPEPIGALAGQH--IVHVACGESHSVALSDQGQVFSWGAGSDG 114
Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG + P + + + QI+CG H L L D Q + +G GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
K+ S PQ L I + ++A G S ALS G ++ WG+ G + D
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230
Query: 270 NCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G H VLT G V G G L P
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ SSGQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG + GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G ++ I+ G +H+ FV SG ++ G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 165/352 (46%), Gaps = 27/352 (7%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V V++ G G GQLG G D +P L+ + +A H LT G+V
Sbjct: 2 VAVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDE-----GEV 56
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G +GQLG M + + P V D H +THI+ G+ H+ V+++G L + G
Sbjct: 57 YTTGSNDAGQLGVRGMEEQVVPIRVAALDTH--MVTHIACGFKHTVAVTETGALASWGGD 114
Query: 154 TFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+GQLG G+ P V + + ++A G H+L L VY FG G G
Sbjct: 115 EYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGS---GDVYSFGDGSSG 171
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNS 265
LG + S P + L + + I+ + SAAL+ +G ++TWGRG S
Sbjct: 172 ALG--HGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGS 229
Query: 266 TSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
T ++ P ++ + + Q A G +H L +T DG + G HG+ T+
Sbjct: 230 TQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG---HGLWGQTGH--GTKED 284
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
++ ++V L+G ++Q++AGA H+ V+ + + WG E QLG + CD
Sbjct: 285 VLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCD 336
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 143/302 (47%), Gaps = 18/302 (5%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V++ GRG GQLG G+ D +P P + I HI+A H+ F++D G ++T
Sbjct: 1 GVAVYALGRGDLGQLGIGDYSD--HPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT 58
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G GQLG P++V++ V IACG +H++ + + + +G +
Sbjct: 59 TGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTET---GALASWGGDE 115
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG I P++ G D+ ++A G + AL+ G +Y++G G
Sbjct: 116 YGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGH 175
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ + P + S L +Q A G NH LT DG+V G +G L +
Sbjct: 176 GNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGS--TQNI 233
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
L VA++ + + D VIQIA G +H+ +T + + +WG G GQ G G D + PK
Sbjct: 234 KLPVAVKALVDHD---VIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQ 290
Query: 382 VN 383
V+
Sbjct: 291 VH 292
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 169/354 (47%), Gaps = 25/354 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG GQLG G + P ++ S S +A G H L+ G++FS
Sbjct: 160 VLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAGSQHSFVLSK-----FGELFS 214
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G+ G+LGHG + + P+P++ G I ++AG HS V G L+T G +
Sbjct: 215 FGCGTFGRLGHGNELPSFNPRPISTLVGKH--IVSVAAGLMHSAAVDSQGALYTWGWNRY 272
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + H+ P K N+ ++ CG H+LVL D G VY FG GQLG+
Sbjct: 273 GQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVL--DVNG-HVYSFGFNVCGQLGI 329
Query: 216 SKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR---GFNSTSDVNC 271
S+ ++ + L + EI+ I+A L+ +G +Y++G G DV
Sbjct: 330 GS-YTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVG 388
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
QS P + FS +NH + D + G + +D ++ P V ++
Sbjct: 389 HQSRPKLMPFSH----FNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPPKVV--ELH 442
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC--DQIHPKVVN 383
N G ++IAAG HSA++T + + T+G G++ LGN C DQ P +VN
Sbjct: 443 NEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDN--FRLGNNCQEDQDMPCIVN 494
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 95/248 (38%), Gaps = 59/248 (23%)
Query: 162 DYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
D S+ + +K+ + + + V IACG H+L +L + V +G + GQLG+
Sbjct: 120 DDDSNFNIIKLPTLIKQGLIVSMIACGDSHALAVLPN--DATVLSWGCNRWGQLGLGDQV 177
Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSL 279
R H I G+S QS+P +
Sbjct: 178 NR----------CHPTPISGLS-------------------------------QSIPVFV 196
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
A G H VL+ GE+ G G L + S P +S L G ++
Sbjct: 197 -----AAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNP-----RPISTLVGKHIV 246
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399
+AAG HSA V A+ TWGW +GQLGLG P N E + R ++V C
Sbjct: 247 SVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLP---NKNKELE-RFNIVKVVC 302
Query: 400 GSGFTYAI 407
G T +
Sbjct: 303 GKNHTLVL 310
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 59/275 (21%)
Query: 128 ITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
++ I+ G +H+ + + + + G +GQLG GD + P +S +A G
Sbjct: 140 VSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVFVAAG 199
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT-IGLHDIEIVGISANGD 245
+HS VL K G +++ FG G G+LG + P T +G H IV ++A
Sbjct: 200 SQHSFVLSK--FG-ELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKH---IVSVAAGLM 253
Query: 246 RSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
SAA+ ++G LYTW GWN
Sbjct: 254 HSAAVDSQGALYTW---------------------------GWNR--------------- 271
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+G L T P K L+ ++++ G H+ V+ N + ++G+
Sbjct: 272 --YGQLGLGTVKKHTLP-----NKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVC 324
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
GQLG+G+ D I P ++L + + D +++ G
Sbjct: 325 GQLGIGSYTDSIKPNRIDL--DLKQNDEIIDIAAG 357
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 181/381 (47%), Gaps = 46/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACGG H +T G+VFSWG S G+LGHG VD+
Sbjct: 292 DSLLPKALESAVVLDVQNIACGGEHAAMVTKQ-----GEVFSWGGESGGRLGHG--VDSD 344
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
P P I ++ G H+ V+ SG L+T GDGT+ G LGHG+ SH P +
Sbjct: 345 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKR 404
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
V+ + +V I+CG H+ V+ Q++ FG G G LG DR +SVSLP+
Sbjct: 405 VNGPLEGIHVSSISCGPWHTAVVTS---SGQLFTFGDGTFGVLG-HGDR-KSVSLPREIE 459
Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNSTSDVNCPQS--LP 276
L + V + +AA+ + G L+TWG G +S +P
Sbjct: 460 SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 519
Query: 277 SSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ + +F Q A G + + L+ G V +G +G L + + + L +E
Sbjct: 520 TRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQ---ADGKLPTPVE-- 574
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L V +IA GA H AV+T + TWG G +G LG G+T D+ P +V
Sbjct: 575 GKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEAL----- 629
Query: 391 RDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 630 KDKQVKSIACGTNFTAAICLH 650
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 160/337 (47%), Gaps = 34/337 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G+LG G D P+L+ S +++ ++ACG H A+T + G ++
Sbjct: 325 EVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVT-----LSGDLY 379
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG V PK V +G ++ IS G H+ V+ SG LFT G
Sbjct: 380 TWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSSGQLFTFG 437
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD +S S P ++ S Q ACG+ H+ +++ +GN ++
Sbjct: 438 DGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKL 497
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G +G+LG + V P + L + ++ + ALS GH+YT
Sbjct: 498 FTWGDGDKGRLGHGDKESKLV--PTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSC 555
Query: 259 -WGRGFNSTSDVNCPQSLPSSLSFS---QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G N+ +D P + LS S + A G HV VLT EV G +G L
Sbjct: 556 VYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHG 615
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L +V IA G +A +
Sbjct: 616 DTNDRNTPTLVEA-----LKDKQVKSIACGTNFTAAI 647
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 165/354 (46%), Gaps = 35/354 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G D +P + +S L+S V +A GG H ALTS G V+
Sbjct: 432 VWCWGLNNSGQLGDGSDTDSSTP--VAVSGLASGVETIAAGGWHTCALTSS-----GGVW 484
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR +SGQLG G + + P V+ G +T I+AG H+ ++ SG ++ G
Sbjct: 485 CWGRNNSGQLGDGSTIYHITPVAVS---GLPSGVTAIAAGDYHTCALTGSGGVWCWGYNL 541
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S+PV VS V IA G H+ L V+ +G+ GQLG
Sbjct: 542 SGQLGDGTTTDRSTPVAVSGLT-SGVTVIAAGRFHTCALTSS---GGVWCWGANFDGQLG 597
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
R+ P GL + I+A G + AL++ G ++ WG + +T++
Sbjct: 598 DGTTTNRTT--PVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTN 654
Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P + LPS ++ A GW H LT GEV G +++G L D + + P
Sbjct: 655 RSTPGAVSGLPSGVT--AIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTP--- 709
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
VS L V IAAG H+ +T + +M WG GQLG G + P
Sbjct: 710 --GAVSGLP-SGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 168/360 (46%), Gaps = 39/360 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G +P + S L S V+ +A GG H AL S G V+
Sbjct: 381 VWCWGRNNSGQLGDGTTTARSTPAAV--SGLPSGVTAIAAGGLHTCALMSS-----GGVW 433
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG +SGQLG G D+ P V+ G + I+AG H+ ++ SG ++ G
Sbjct: 434 CWGLNNSGQLGDGSDTDSSTPVAVS---GLASGVETIAAGGWHTCALTSSGGVWCWGRNN 490
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H +PV VS V IA G H+ L V+ +G GQLG
Sbjct: 491 SGQLGDGSTIYHITPVAVSGL-PSGVTAIAAGDYHTCALTGS---GGVWCWGYNLSGQLG 546
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
+ DR V++ +T G + I+A + AL++ G ++ WG F+ +T
Sbjct: 547 DGTTTDRSTPVAVSGLTSG-----VTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTT 601
Query: 267 SDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
++ P LPS ++ + AA GW H LT GEV G +++G L D + + P
Sbjct: 602 TNRTTPVAVSGLPSGVT-AIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTP- 658
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L V IAAG EH+ +T + + WG +GQLG G T ++ P V+
Sbjct: 659 ----GAVSGLP-SGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVS 713
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 159/357 (44%), Gaps = 30/357 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VW WG GQLG G S S ++ +A GG H AL S G V+
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSS-----GGVW 280
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR SGQLG G D+ P V+ G +T I+AG H+ ++ SG ++ G
Sbjct: 281 CWGRNDSGQLGDGSDTDSSTPVAVS---GLPSGVTAIAAGDYHTCALTGSGEVWCWGGNG 337
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G + S+P VS V IA G H+ L+ V+ +G GQLG
Sbjct: 338 FGQLGDGTTTARSTPAAVSGL-PSGVETIAAGDYHTCALMSS---GGVWCWGRNNSGQLG 393
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
RS P GL + I+A G + AL + G ++ WG G S +D
Sbjct: 394 DGTTTARST--PAAVSGLPS-GVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTD 450
Query: 269 VNCPQSLPSSLSFSQ--AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ P ++ S + AA GW H LT G V G ++ G L D + P++V
Sbjct: 451 SSTPVAVSGLASGVETIAAGGW-HTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAV- 508
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L V IAAG H+ +T + + WG+ GQLG G T D+ P V+
Sbjct: 509 ----SGLP-SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVS 560
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 154/355 (43%), Gaps = 34/355 (9%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG G +P + S L S V+ +A G H ALT G V WG
Sbjct: 77 WGGNDFGQLGDGTPTTRSTPGAV--SGLPSGVTAIAAGNYHTCALTGS-----GGVRCWG 129
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG+G P V+ G +T I+AG +H+ + SG + GD +GQ
Sbjct: 130 ANYSGQLGNGLTFGRSTPGAVS---GLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQ 186
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G + +PV VS V IA G H+ L +V+ +G GQLG
Sbjct: 187 LGDGTTTNRRTPVAVSGL-PSGVTAIAAGGLHTCALTGS---GEVWCWGYNYYGQLG-DG 241
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
S S P GL + I+A G + AL + G ++ WGR G S +D +
Sbjct: 242 TTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSST 300
Query: 272 P---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P LPS + + A G H LTG GEV GG+ G L D + + P
Sbjct: 301 PVAVSGLPSGV--TAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTP-----A 353
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L V IAAG H+ + + + WG GQLG G T + P V+
Sbjct: 354 AVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVS 407
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 137/300 (45%), Gaps = 29/300 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G ++P + +S L S V+ +A G H ALT G V+
Sbjct: 483 VWCWGRNNSGQLGDGSTIYHITP--VAVSGLPSGVTAIAAGDYHTCALTGS-----GGVW 535
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG SGQLG G D P V+ G +T I+AG H+ ++ SG ++ G
Sbjct: 536 CWGYNLSGQLGDGTTTDRSTPVAVS---GLTSGVTVIAAGRFHTCALTSSGGVWCWGANF 592
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + ++PV VS V IA G H+ L +V+ +G GQLG
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGL-PSGVTAIAAGGWHTCALTSS---GEVWCWGDNYYGQLG 648
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
RS P GL + I+A + + AL++ G ++ WG + +T++
Sbjct: 649 DGTTTNRST--PGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTN 705
Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P + LPS ++ A + H LTG G V+ G + G L D + T P+ V
Sbjct: 706 RSTPGAVSGLPSGVTAIAAGV--YHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 763
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WGA DGQLG G + +P + +S L S V+ +A GG H ALTS G+V+
Sbjct: 585 VWCWGANFDGQLGDGTTTNRTTP--VAVSGLPSGVTAIAAGGWHTCALTSS-----GEVW 637
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G + P V+ G +T I+AGW H+ ++ SG ++ GD
Sbjct: 638 CWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGWEHTCALTSSGEVWCWGDNY 694
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + S+P VS V IA G+ H+ L V +G+ GQLG
Sbjct: 695 YGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAGVYHTCALTGS---GGVMCWGNNGDGQLG 750
Query: 215 VSKDRIRSVSLPQVT 229
+ R+ + VT
Sbjct: 751 DGRPLYRTTPVDVVT 765
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+T I+AG H+ ++ SG + G FGQLG G + S+P VS V IA G
Sbjct: 55 VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGL-PSGVTAIAAGN 113
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+ L V +G+ GQLG RS P GL + I+A GD +
Sbjct: 114 YHTCALTGS---GGVRCWGANYSGQLGNGLTFGRST--PGAVSGLPS-GVTAIAAGGDHT 167
Query: 248 AALSAEGHLYTWGRGF------NSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDG 298
AL + G + WG + +T++ P LPS + + A G H LTG G
Sbjct: 168 CALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGV--TAIAAGGLHTCALTGSG 225
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV G +++G L D S R A+ + + + IAAG H+ + + +
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYS-RSTPAAVGGLPS----GMTAIAAGGLHTCALMSSGGVW 280
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVN 383
WG + GQLG G+ D P V+
Sbjct: 281 CWGRNDSGQLGDGSDTDSSTPVAVS 305
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW WG GQLG G + +P + S L S V+ +A G H ALTS G+V
Sbjct: 635 EVWCWGDNYYGQLGDGTTTNRSTPGAV--SGLPSGVTAIAAGWEHTCALTSS-----GEV 687
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG GQLG G + P V+ G +T I+AG H+ ++ SG + G+
Sbjct: 688 WCWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGVYHTCALTGSGGVMCWGNN 744
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
GQLG G ++PV V + + V+
Sbjct: 745 GDGQLGDGRPLYRTTPVDVVTSASWGVY 772
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 135/254 (53%), Gaps = 23/254 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG + GQLG G D +P Q+ L++ S++ ++A GG H LALTS G+V
Sbjct: 140 RVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTS-----DGRV 194
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG+ SSGQLG+ VD+ P V G +T ++AG NHS ++ G ++ G
Sbjct: 195 FAWGKNSSGQLGNNSTVDSSIPVQV---QGLPANVTAVAAGGNHSLALTSDGRIYAWGLN 251
Query: 154 TFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G + S+PV V+ ++ G HSL L++D VY +G GQ
Sbjct: 252 SSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQD---GTVYAWGGNSYGQ 308
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG + +P GL + + +SA G S AL+++G++Y WG G +T
Sbjct: 309 LG--NGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTT 364
Query: 267 SDVNCPQSLPSSLS 280
S+ N P + S LS
Sbjct: 365 SNRNTPVRVFSVLS 378
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 32/320 (10%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
+ ++ GG+H L LTS +V ++WG ++GQLG G P P ++
Sbjct: 73 AAVSAGGSHSLVLTSDQTV-----WAWGDNTNGQLGDGTTTGRQTPTPAQGLP----SVA 123
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMR 188
+SAG +HS ++D G +F G + GQLG G +PV+V + + +A G
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
HSL L D +V+ +G GQLG + S+P GL + ++A G+ S
Sbjct: 184 HSLALTSD---GRVFAWGKNSSGQLG--NNSTVDSSIPVQVQGLP-ANVTAVAAGGNHSL 237
Query: 249 ALSAEGHLYTWG------RGFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGE 299
AL+++G +Y WG G +TS+ + P LP+ + G +H L L DG
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V GG+ +G L + +S P+ +V+ L V ++AG S +T + +
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPV-----QVTGL--ANVTAVSAGGSDSLALTSDGYVYA 350
Query: 360 WGWGEHGQLGLGNTCDQIHP 379
WG GQLG G T ++ P
Sbjct: 351 WGLNSSGQLGDGTTSNRNTP 370
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 137/297 (46%), Gaps = 21/297 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG T+GQLG G +P L SV+ ++ G +H LALT G+VF+
Sbjct: 91 VWAWGDNTNGQLGDGTTTGRQTPTPAQ--GLPSVAQVSAGESHSLALTD-----DGRVFA 143
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SSGQLG G D+ P V TI ++AG NHS ++ G +F G +
Sbjct: 144 WGLNSSGQLGDGTTADSRTPVQVQGL-ATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSS 202
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+ S PV+V NV +A G HSL L D ++Y +G GQLG
Sbjct: 203 GQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNHSLALTSD---GRIYAWGLNSSGQLG- 257
Query: 216 SKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
+ S P + GL + V +SA D S AL +G +Y WG G +T+
Sbjct: 258 -DGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTA 316
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + + + + G + L LT DG V G + G L D + P+ V
Sbjct: 317 SEMPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
++ G HSLVL D V+ +G GQLG R P GL + +SA
Sbjct: 75 VSAGGSHSLVLTSD---QTVWAWGDNTNGQLGDGTTTGRQTPTPAQ--GLP--SVAQVSA 127
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLV 293
S AL+ +G ++ WG G +T+D P Q L + + A G NH L
Sbjct: 128 GESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLA 187
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
LT DG V G + G L + V S+ P+ +V L V +AAG HS +T
Sbjct: 188 LTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-----QVQGLPA-NVTAVAAGGNHSLALTS 241
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ I WG GQLG G T + P +V
Sbjct: 242 DGRIYAWGLNSSGQLGDGTTSNSSTPVLV 270
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 159/353 (45%), Gaps = 30/353 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ N +V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G G
Sbjct: 59 GCNDLGQLGHEKSRKR--PEQVGALDAQ--NIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I I+A G S AL+ G ++ WGR G N +D
Sbjct: 172 GYDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
KV L G V QIA G +H SA V I ++G G +GQLG+G+T ++ P
Sbjct: 286 RKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 26/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF T+ + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK--TVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDK---GQVYAWGFAAD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ +P+ L D++IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-EYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ + PQ + S L F Q A G H LT G V G + G L +
Sbjct: 173 YDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + +L K++ I+ G +H+A +T+ + T+G G +GQLG +T +I+P+
Sbjct: 232 VP-----NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 381 VV 382
V
Sbjct: 287 KV 288
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G L + SPQL+ +A GGAH ALT + G V
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +IS G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYISCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPST--GRIYSFGLGGNGQL 327
Query: 214 GVSKDRIRSVSLP 226
G+ R P
Sbjct: 328 GMGSTSNRKSPFP 340
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
+V++WG DGQLG +E + N+ SLS V ++ ACG H LAL+ G +
Sbjct: 104 QVYAWGFAADGQLGLPGT-EEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK-----GSE 157
Query: 93 VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG+ GQLG G ++ P+ + G + I+AG HS ++ SG +F G
Sbjct: 158 VFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPF--GQIAAGGAHSFALTLSGAVFGWG 215
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FGQLG D P + S ++ + I+CG H+ L K+ V+ FG+G G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE---GGVFTFGAGGYG 272
Query: 212 QLG 214
QLG
Sbjct: 273 QLG 275
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG E++P+ + + V+ +ACG H A PS+ G+++S
Sbjct: 263 VFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFV-PST---GRIYS 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G +GQLG G + P PV
Sbjct: 319 FGLGGNGQLGMGSTSNRKSPFPV 341
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG S GQ G G + + P+P + H + ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLGH S P + + +++ +ACG HS+ L QV+ +G+G GQ
Sbjct: 61 NTKGQLGHES--EGSKPELIGALAGQHIVHVACGESHSVALSDQ---GQVFSWGAGSDGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG++ +V++P++ L+ I+ IS AL+A+G +TWG+ NS +
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172
Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ PS S +Q A G H L+ G V G + G L +
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRR 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G G + PQ+ +V +ACGG H + L G+V++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + GQLGH + P+ + G I H++ G +HS +SD G +F+ G G+ G
Sbjct: 59 GLNTKGQLGHES--EGSKPELIGALAGQH--IVHVACGESHSVALSDQGQVFSWGAGSDG 114
Query: 157 QLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG + + P + + + QI+CG H L L D Q + +G GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
K+ S PQ L I + ++A G S ALS G ++ WG+ G + D
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230
Query: 270 NCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G H VLT G V G G L P
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ SSGQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG + GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G ++ I+ G +H+ FV SG ++ G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 153/334 (45%), Gaps = 28/334 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ V+ WG G+LG G + DE L P+ ++ SSV ACG +H L LT G
Sbjct: 1 MAVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTK-----DG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTC 150
K+FS G GQLGH D L K F Y +TH+S G HS +++ G +F+
Sbjct: 56 KLFSCGNNDHGQLGHD--TDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW 113
Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G + GQLGH D +++++P + + K V QIA G HSL L +++ +G+
Sbjct: 114 GSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTN---SGELFSWGANG 170
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG+ + V+ P + L I I I+ G+ S A+S G ++ WG+ G
Sbjct: 171 YGQLGLGTTGEKVVT-PTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N PQ L + +L + G + LT +G V G G L +
Sbjct: 230 NDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL 289
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V L G K+ QIA G H+ +R
Sbjct: 290 P-----RMVFELMGSKITQIACGRRHTLAFVPSR 318
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 32/280 (11%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
++ G+ G+LG G P ++ + +V Q ACG H+L+L KD +++
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKD---GKLFS 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
G+ GQLG D + + PQ L + + +S S AL+ G +++WG
Sbjct: 60 CGNNDHGQLGHDTDCLPN-KRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSI 118
Query: 263 --FNSTSDVNC---PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+D+ P+ + + + + Q A G H L LT GE+ G + +G L
Sbjct: 119 GQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLG--- 175
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ +T V V +L G+ + IA G HS V+++ AI WG GQLGL +
Sbjct: 176 -LGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVS 234
Query: 376 QIHP-----------KVVNLGDEFQNRDTQL-EVF-CGSG 402
+ P + ++ GD+F TQ VF CG+G
Sbjct: 235 RCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAG 274
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 175/377 (46%), Gaps = 74/377 (19%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G GQLG G L D L P++ NLS L +V +AC H A+ S G++++WG
Sbjct: 66 WGYGGCGQLGFGNLEDCLVPRV-NLS-LKNVVQVACSDRHTAAILS-----NGELYTWGC 118
Query: 99 GSSGQLGHGEMVDAL------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+G+LGHG+ ++ P V +G + + +S G H+G ++D T G
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEK--VIQVSCGSYHTGCLTDDKKALTWGL 176
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD + +P + S + +I+CG H+ +LL + ++Y FG G G+
Sbjct: 177 GLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILL---VTGKLYMFGGGAFGK 233
Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
LG V +P++ G L DI+I +S SAA++ G +YTWG+G
Sbjct: 234 LGFGS--TDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--------- 282
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
LG H+ G H LS P+R +S
Sbjct: 283 ------------GRLG--HI-----------FNGPEHDFLS-PKR-------------LS 303
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
NL+ ++ I+ G HS +++ I TWG ++ +G+ IHP + + QN+
Sbjct: 304 NLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN----IGHGIQGIHPNMPSKHPILQNK 359
Query: 392 DTQLEVFCGSGFTYAIS 408
+ ++V C S + A+S
Sbjct: 360 NI-VQVVCSSSHSIALS 375
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 33/332 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFTC 150
V WG GQ HG + + P P DG R+ +I+ +S G N+S +++SG L
Sbjct: 10 VVVWGSSEYGQ--HGSKGEEVSPGP-HLVDGLRHLSSISKVSCGSNYSAAITNSGDLILW 66
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G GQLG G+ P S KNV Q+AC RH+ +L + ++Y +G K
Sbjct: 67 GYGGCGQLGFGNLEDCLVPRVNLSL--KNVVQVACSDRHTAAILSN---GELYTWGCSKN 121
Query: 211 GQLGVSKDRI----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-- 264
G+LG + + VS P L +++ +S + L+ + TWG G
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 265 ----STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T D+ P+ + S L + + G +H +L G++ M GG G L
Sbjct: 182 LGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLG----FG 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW-GEHGQLGLGNTCDQI 377
ST + + L+ +++ +++ G++HSA VT+ + TWG G G + G D +
Sbjct: 238 STDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFL 297
Query: 378 HPK-VVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
PK + NL F +++ CG+ + A+S
Sbjct: 298 SPKRLSNLEKAF-----IVDISCGNSHSVALS 324
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS----PQLLNLSSL--SSVSMLACGGAHVLALTSPSSV 88
++++WG +G+LG G+ +S Q + + +L V ++CG H LT
Sbjct: 112 ELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK-- 169
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
K +WG G G+LGHG+ D PK + G I IS G +H+ + +G L+
Sbjct: 170 ---KALTWGLGLQGRLGHGDTQDIFTPKLIESLAG--LPIKEISCGGHHTAILLVTGKLY 224
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G G FG+LG G P + + + +++ G +HS + K C +VY +G
Sbjct: 225 MFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTK-C--GKVYTWGQ 281
Query: 208 GKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G G+LG + P+ L IV IS S ALS G +YTWG N
Sbjct: 282 G--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN 337
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
++ +++CG +S + G+ + +G G GQLG + +P+V + L ++ V
Sbjct: 43 SISKVSCGSNYSAAITNS--GDLIL-WGYGGCGQLGFG--NLEDCLVPRVNLSLKNV--V 95
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN------------STSDVNCPQSLPS--SLSFSQA 284
++ + +AA+ + G LYTWG N S + V+ P + + Q
Sbjct: 96 QVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV 155
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
+ G H LT D + L G G L + P + + +L G+ + +I+ G
Sbjct: 156 SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTP-----KLIESLAGLPIKEISCG 210
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGF 403
H+A++ + +G G G+LG G+T D + P+++ E D Q+ +V GS
Sbjct: 211 GHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLL----EGPLEDIQITKVSLGSQH 266
Query: 404 TYAISR 409
+ A+++
Sbjct: 267 SAAVTK 272
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 177/389 (45%), Gaps = 77/389 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D + P+L+ ++++V +ACG H A+T + G+++
Sbjct: 300 EVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVT-----MAGEIY 354
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G +G LGHG + PK ++ +G + ++ G H+ V+ +G LFT G
Sbjct: 355 TWGDGMHYAGLLGHGTDISHWIPKRISGPLEG--LQVASVTCGPWHTALVTSTGQLFTFG 412
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--------QVY 203
DGTFG LGHG+ + + P +V S +ACG+ H+ +++ + +++
Sbjct: 413 DGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLF 472
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+G G + +LG +GD+ L
Sbjct: 473 TWGDGDKNRLG----------------------------HGDKEPRLK------------ 492
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P +P+ + F+ + H L LT G V +G + +G L +P
Sbjct: 493 --------PTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNP-YADGKV 543
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V L G V +IA GA H AV+T + TWG G +G+LG G+ D+ P +
Sbjct: 544 PCLVE----DKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPTL 599
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
V + +++ + + CG+ ++ AI H
Sbjct: 600 V---EALKDKHVKY-IACGANYSAAICLH 624
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 124/315 (39%), Gaps = 78/315 (24%)
Query: 110 VDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
D L P+P+ D H HI+ G+ H+ V+ G +FT G+ + G+LGHG +
Sbjct: 266 ADVLLPRPLESNVVLDVH-----HIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDV 320
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVS 224
P V S V IACG H+ + + ++Y +G G G LG D I
Sbjct: 321 IQPRLVESLAMTTVDFIACGEFHTCAV---TMAGEIYTWGDGMHYAGLLGHGTD-ISHWI 376
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA 284
+++ L +++ ++ +A +++ G L+T+
Sbjct: 377 PKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTF------------------------- 411
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
GDG +LG + ++ P+ V S L G++ I +A G
Sbjct: 412 -----------GDGTFGVLGHGNRENIAYPKEVES-------------LAGLRTIAVACG 447
Query: 345 AEHSAVVTE-----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 393
H+A V E + + TWG G+ +LG G+ ++ P V +F
Sbjct: 448 VWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFH-- 505
Query: 394 QLEVFCGSGFTYAIS 408
++ CG T ++
Sbjct: 506 --KIACGHSLTVGLT 518
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 161/356 (45%), Gaps = 37/356 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG+ + GQ+G G D SP + ++S++ +A A L L G VF+
Sbjct: 270 VWAWGSNSSGQMGDGTWTDRPSP--VQVTSIARAKAVAAQDAGSLVLLDD-----GGVFA 322
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQLG G D+ P V +T ++AG H+ + G L+T G G
Sbjct: 323 WGLNSQGQLGIGTTADSPLPVRVRGLG----AVTSLAAGTQHAVVLRADGTLWTWGHGAT 378
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
GQLGHG SP V+ NV +A G HS+ L D V+ +G GQL
Sbjct: 379 GQLGHGSSERMLSPEVVTRL--SNVASVASGSFHSVAALSD---GSVWTWGRNTNGQLGD 433
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G + +R V +P ++ +V +SA+G S AL ++G ++ WGR G +T
Sbjct: 434 GTTTERHLPVRVPGLS------GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTK 487
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
D P + S A G +H++ L DG V G + G L D P+
Sbjct: 488 DRASPARVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPV---- 543
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V+ L G V +AAGA S + + + WG G GQLG G + P V
Sbjct: 544 -QVTGLSG--VTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVT 596
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 161/355 (45%), Gaps = 38/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA GQLG G SP + ++ LS+ ++ G A+ LA+ + G V+S
Sbjct: 920 VWAWGANGRGQLGDGTTTSSASP--VRVAGLSAAMNVSVGQAYSLAV-----LPDGTVWS 972
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SGQLG G V PKPV + ++AG +H V G ++ G F
Sbjct: 973 WGANDSGQLGDGTNVARTTPKPVQDL----ADVKAVTAGAHHVVAVRHDGTVWGWGANAF 1028
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQ+G G + PV+V +N + + G +HSL LL D + +GS + GQLG
Sbjct: 1029 GQVGDGTHFWRFRPVRVEGLLNAV--ETSAGEQHSLALLGD---ERALSWGSHEYGQLG- 1082
Query: 216 SKDRIRSVSLPQVTIGLHDIEI----VGISANGDRSAALSAEGHLYTWG------RGFNS 265
D SL V + L ++ V +SA +AAL A+G + TWG G +
Sbjct: 1083 --DAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGT 1140
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
T P ++ + A H L L DG V G + G L D T P+ V
Sbjct: 1141 TESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQV 1200
Query: 326 -ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
LEKV+ IAAG+ HS V E+ + WG+ GQLG G + P
Sbjct: 1201 VGLEKVT--------AIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVP 1247
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 151/353 (42%), Gaps = 28/353 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG + GQLG G + P + L V + GG + L + G V++
Sbjct: 820 VWSWGGNSQGQLGDGGVTSRAYPA--KVEGLWGVVAVLAGGDSSMVLRAD-----GTVWT 872
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SGQLG G + D P V G I G H+ VS G ++ G
Sbjct: 873 WGANGSGQLGDGTLGDRASPLEVKGLAG----IATGVMGEAHALVVSQDGTVWAWGANGR 928
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S +SPV+V+ ++ G +SL +L D V+ +G+ GQLG
Sbjct: 929 GQLGDGTTTSSASPVRVAGL--SAAMNVSVGQAYSLAVLPD---GTVWSWGANDSGQLGD 983
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSDVN---- 270
+ R+ P+ L D++ V +A A+ +G ++ WG F D
Sbjct: 984 GTNVARTT--PKPVQDLADVKAV--TAGAHHVVAVRHDGTVWGWGANAFGQVGDGTHFWR 1039
Query: 271 -CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + L+ + + G H L L GD L G +G L D E S P+ V L
Sbjct: 1040 FRPVRVEGLLNAVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEPVGVKLPS 1099
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L V + ++A +H+A + + + TWG GQLG G T + P V
Sbjct: 1100 SKVL--VPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITV 1150
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 159/351 (45%), Gaps = 37/351 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG + GQLG G D SP + + L +V+ LA G H + L + G +++
Sbjct: 320 VFAWGLNSQGQLGIGTTAD--SPLPVRVRGLGAVTSLAAGTQHAVVLRAD-----GTLWT 372
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G++GQLGHG L P+ VT + +++G HS G ++T G T
Sbjct: 373 WGHGATGQLGHGSSERMLSPEVVTRLS----NVASVASGSFHSVAALSDGSVWTWGRNTN 428
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G PV+V V ++ HS L D V+G+G +GQ+G
Sbjct: 429 GQLGDGTTTERHLPVRVPGL--SGVVSVSASGHHSFALRSD---GTVWGWGRNAQGQMGD 483
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+KDR + P GL ++ +++ G AL +G ++TWG G +T+
Sbjct: 484 GTTKDR----ASPARVEGLSSVKA--LASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTT 537
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
D P + + A G L L DG V G G L D V P+
Sbjct: 538 DRRAPVQVTGLSGVTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPV---- 593
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+V+ L +V+++AAGA H V ++ + WG GQ+G G+ D+
Sbjct: 594 -QVTGL--TRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFR 641
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 172/383 (44%), Gaps = 40/383 (10%)
Query: 13 KSALINNAKPKIEEEEEEQ----QVVKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSL 66
+S + +A K+ + Q VW+WG GQLGTG + + ++ Q+ L+ +
Sbjct: 42 RSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDV 101
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
+S+ A G AH LAL + +V ++WG ++GQ+G G VD P+ V
Sbjct: 102 TSI---AAGDAHSLALRADRTV-----WTWGGNNAGQVGDGTNVDRPTPQKVPGLS---- 149
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ ++AG HS + G ++ G +GQLG G + SP +V V +A G
Sbjct: 150 DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTG--VVALAAG 207
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
SL + D V+ +G+ GQLG I+ ++ QV+ L + V +A
Sbjct: 208 FDFSLAVRSD---GTVWAWGANGSGQLG-DGTYIQRLAPTQVSQ-LQGVSAV--TAGLYH 260
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
+ AL ++G ++ WG G + +D P + S A LVL DG V
Sbjct: 261 ALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGV 320
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + G L S P+ +V L V +AAG +H+ V+ + + TW
Sbjct: 321 FAWGLNSQGQLGIGTTADSPLPV-----RVRGLG--AVTSLAAGTQHAVVLRADGTLWTW 373
Query: 361 GWGEHGQLGLGNTCDQIHPKVVN 383
G G GQLG G++ + P+VV
Sbjct: 374 GHGATGQLGHGSSERMLSPEVVT 396
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 160/352 (45%), Gaps = 37/352 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG GQ+G G D SP + LSSV LA GG+H++AL + G V++
Sbjct: 470 VWGWGRNAQGQMGDGTTKDRASPA--RVEGLSSVKALASGGSHMVALRTD-----GTVWT 522
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +GQLG G D P VT G +T ++AG S + G ++ GDG
Sbjct: 523 WGYNGAGQLGDGTTTDRRAPVQVTGLSG----VTSVAAGAYFSLALRTDGTVWAWGDGFE 578
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +SPV+V+ V ++A G H L + D V+ +G GQ+G
Sbjct: 579 GQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDD---GTVWAWGDNTEGQMGD 633
Query: 216 SK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
DR R+V + +T G+ + + G+ S AL+ +G L WG G +
Sbjct: 634 GSWSDRFRAVQVYGLT-GVSSV-VGGLY----HSMALAQDGTLRAWGGNAYGQFGDGGVT 687
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
++P + HVL + DG +L G + G L S+ P+
Sbjct: 688 PRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPV---- 743
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L + +++AG HS +V + ++ WG GQLG G+T + P
Sbjct: 744 -QVRGLGQGR--RLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASP 792
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 147/355 (41%), Gaps = 39/355 (10%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG DGQLG G +P + ++ L ++ +A H LAL S G V++WG
Sbjct: 1127 TWGGNADGQLGDGTTESRATP--ITVAGLGAMVAVAPAARHTLALRSD-----GTVWAWG 1179
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ GQLG G P V + +T I+AG HS V + G ++ G FGQ
Sbjct: 1180 DNTFGQLGDGSNTRRTLPVQVVGLE----KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GV 215
LG G + + P ++ +A G HSL+L D ++ G+ GQL G
Sbjct: 1236 LGDGTMDARAVPTRMLGL--DGAVAVAGGEYHSLMLRFD---GTLWATGNNSHGQLGEGT 1290
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+R+ P + L + V A G S AL +G ++TWG G + +
Sbjct: 1291 FTNRLS----PFQVVELDQVRTV--RAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTR 1344
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P +P + + G +H + E G + HG L + P
Sbjct: 1345 RVPAPVPGLTAIASVGAGTSHTFAV--GSETWAWGRNSHGQLGTGDSSDRLEP-----TL 1397
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L GVK + AG + S + + M+WG HG LG+G + P V L
Sbjct: 1398 VKGLHGVK--SVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPGQRTVPGAVTL 1450
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 160/400 (40%), Gaps = 83/400 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D +P + ++ LS V+ +A G LAL + G V++
Sbjct: 520 VWTWGYNGAGQLGDGTTTDRRAP--VQVTGLSGVTSVAAGAYFSLALRTD-----GTVWA 572
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G GQLG G V P VT + ++AG H V D G ++ GD T
Sbjct: 573 WGDGFEGQLGDGAGVQRASPVQVTGLT----RVVKLAAGAAHGLAVRDDGTVWAWGDNTE 628
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD----CLGNQVYG-FGSG-- 208
GQ+G G + V+V V + G+ HS+ L +D G YG FG G
Sbjct: 629 GQMGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGV 686
Query: 209 ----------------------------------------KRGQLGVSKDRIRSVSLPQV 228
+ GQLG+ S LP
Sbjct: 687 TPRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSS--LPVQ 744
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSL 279
GL +SA S + A+G + WG+ G ST+ P ++LP +
Sbjct: 745 VRGLGQGRR--LSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCAR 802
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ A+ G H LVL DG V GG+ G L D S P KV L GV +
Sbjct: 803 A---ASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYP-----AKVEGLWGV--V 852
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ AG + S V+ + + TWG GQLG G D+ P
Sbjct: 853 AVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASP 892
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 93/224 (41%), Gaps = 25/224 (11%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG---VSKDRIRSVSL 225
P S + ++A G +HSL + + V+ +G GQLG VS R+ + +
Sbjct: 39 PAARSQALASATSKVAAGAQHSLYVTQ---AGTVWAWGGNGSGQLGTGSVSFQRVVAQQV 95
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL 279
P +T ++ I+A S AL A+ ++TWG G + D PQ +P
Sbjct: 96 PGLT------DVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLS 149
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
A G H L L DG V G + +G L P +V L GV +
Sbjct: 150 DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSP-----AQVVGLTGV--V 202
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+AAG + S V + + WG GQLG G ++ P V+
Sbjct: 203 ALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVS 246
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G + P + L++++ + G +H A +G + ++
Sbjct: 1325 VWTWGHNGQGQLGDGTVTTRRVPA--PVPGLTAIASVGAGTSHTFA-------VGSETWA 1375
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR S GQLG G+ D L P V G + + AG + S G + G
Sbjct: 1376 WGRNSHGQLGTGDSSDRLEPTLVKGLHG----VKSVLAGGDFSVAQGADGSAMSWGTNVH 1431
Query: 156 GQLGHGDYRSHSSPVKVS 173
G LG G + P V+
Sbjct: 1432 GTLGIGLPGQRTVPGAVT 1449
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 159/353 (45%), Gaps = 30/353 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ N +V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G G
Sbjct: 59 GCNDLGQLGHEKSRKR--PEQVGALDAQ--NIVAVSCGEAHTLTLNDKGQVYAWGFAADG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I I+A G S AL+ G ++ WGR G N +D
Sbjct: 172 GYDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
KV L G V QIA G +H SA V I ++G G +GQLG+G+T ++ P
Sbjct: 286 RKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 26/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF T+ + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNK--TVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDK---GQVYAWGFAAD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ +P+ L D++IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-EYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
++ + PQ + S L F Q A G H LT G V G + G L +
Sbjct: 173 YDLKKQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + +L K++ I+ G +H+A +T+ + T+G G +GQLG +T +I+P+
Sbjct: 232 VP-----NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 381 VV 382
V
Sbjct: 287 KV 288
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G L + SPQL+ +A GGAH ALT + G V
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +IS G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYISCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPST--GRIYSFGLGGNGQL 327
Query: 214 GVSKDRIRSVSLP 226
G+ R P
Sbjct: 328 GMGSTSNRKSPFP 340
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
+V++WG DGQLG +E + N+ SLS V ++ ACG H LAL+ G +
Sbjct: 104 QVYAWGFAADGQLGLPGT-EEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK-----GSE 157
Query: 93 VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG+ GQLG G ++ P+ + G + I+AG HS ++ SG +F G
Sbjct: 158 VFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPF--GQIAAGGAHSFALTLSGAVFGWG 215
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FGQLG D P + S ++ + I+CG H+ L K+ V+ FG+G G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE---GGVFTFGAGGYG 272
Query: 212 QLG 214
QLG
Sbjct: 273 QLG 275
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG E++P+ + + V+ +ACG H A PS+ G+++S
Sbjct: 263 VFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFV-PST---GRIYS 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G +GQLG G + P PV
Sbjct: 319 FGLGGNGQLGMGSTSNRKSPFPV 341
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 159/322 (49%), Gaps = 24/322 (7%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLS-SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
G + G+LG G ++ P+ +N++ + VS H LAL+ G+V+SWG
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSD-----TGEVYSWGD 452
Query: 99 GSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G+LGHG++ PK + F G I +SAG+ HS V+ G L+T G+G G+
Sbjct: 453 GDYGKLGHGDVATHKEPKLIQGPFIGK--VIELVSAGYRHSAAVTSDGQLYTWGEGDHGR 510
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LGHGD P V S + V +ACG H+L +D GN V+ FGSG G+LG
Sbjct: 511 LGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRD--GNTVWSFGSGDNGKLG-HG 567
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----STSDVNCP 272
+ IR + PQ GL +I ++A S AL+ G ++TWG+G N S + P
Sbjct: 568 NTIR-LYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEITLFSP 626
Query: 273 QSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ + ++G +H L LT + V G + G ST P+S KV
Sbjct: 627 AVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGH---STSPVSRP-SKV 682
Query: 331 SNLDGVKVIQIAAGAEHSAVVT 352
NL+G ++ QI+AG HS T
Sbjct: 683 INLEGKQINQISAGTSHSVAWT 704
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 162/366 (44%), Gaps = 42/366 (11%)
Query: 37 WSWGAGTDGQLG---TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ WG G +GQLG G+ + SP + + + + CG LTS G V
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSP--IKIQNFKIAQRIVCGQNCTFVLTS-----QGTV 3447
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN---HSGFVSDSGCLFTC 150
S G G+ G+LGHG D+L P + IT +S HS ++++G +F+
Sbjct: 3448 LSCGEGNYGRLGHGHS-DSL-PNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSW 3505
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG FG+LGHG+ P + S + V Q+ACG +HS VL +D +VY FGS +
Sbjct: 3506 GDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQD---GEVYVFGSAEH 3562
Query: 211 GQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
G+LG ++K R + V G +I+ + A G E ++ +G
Sbjct: 3563 GKLGLGGHINKKRPTKI----VHKGFLNIKYI---ACGQNHTICIGENVVWAFGEGEGGK 3615
Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G S D+ PQ + + + +A G + L+ DGE+ G + L D V
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDN---LQDATDVL 3672
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T L EK+ G V +A G +H V+T + WG G LG G+
Sbjct: 3673 YTEKL--IPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQK 3730
Query: 379 PKVVNL 384
P ++ +
Sbjct: 3731 PMIIQI 3736
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 146/332 (43%), Gaps = 37/332 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-----SSVSMLACGGAHVLALTSPSSVIG 90
V S G G G+LG G H + P L +S+L + VS H LALT
Sbjct: 3447 VLSCGEGNYGRLGHG--HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE-----T 3499
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+VFSWG G G+LGHG PK + + +D + ++ G HS +S G ++
Sbjct: 3500 GEVFSWGDGDFGKLGHGNNERQRKPKLIESLYD---VVVIQVACGHKHSAVLSQDGEVYV 3556
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG-NQVYGFGSG 208
G G+LG G + + P K+ N+ IACG H++ C+G N V+ FG G
Sbjct: 3557 FGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTI-----CIGENVVWAFGEG 3611
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNSTS 267
+ G+LG+ + + +PQ I L+ I + LS +G LY+ G +
Sbjct: 3612 EGGKLGIGSKK--DIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDAT 3669
Query: 268 DVNCPQSLPSSLSF-------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
DV + L F + A G +HVLVLT G V G + G+L +
Sbjct: 3670 DVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQ 3729
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P+ + + L + QIA H A T
Sbjct: 3730 KPMIIQI-----LSDKNIKQIATSRTHCAAWT 3756
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G + P L+ S V +ACG H LA + G V+
Sbjct: 499 QLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRD----GNTVW 554
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDG 153
S+G G +G+LGHG + P+ + +G R Y I ++AG + S ++ +G +FT G G
Sbjct: 555 SFGSGDNGKLGHGNTIRLYKPQKI---EGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQG 611
Query: 154 TFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ LG G + SP V + + + I+ G H L L ++C VY +GS +GQ
Sbjct: 612 S--NLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNC---AVYAWGSNGKGQ 666
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
G VS P I L +I ISA S A
Sbjct: 667 CG-QGHSTSPVSRPSKVINLEGKQINQISAGTSHSVA 702
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+L+ V +ACG H L+ G+V+
Sbjct: 3501 EVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQ-----DGEVY 3555
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGD 152
+G G+LG G ++ P + H+ I +I+ G NH+ + + ++ G+
Sbjct: 3556 VFGSAEHGKLGLGGHINKKRPTKIV----HKGFLNIKYIACGQNHTICIGE-NVVWAFGE 3610
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LG G + P ++ + KN+ + CG ++ L +D ++Y GS
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSED---GELYSCGS---DN 3664
Query: 213 LGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
L + D + + L P+ + ++ D L+A GH++ WG
Sbjct: 3665 LQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNN 3715
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ-IAAGAEHS 348
H L L+ GEV G +G L + + P + + KVI+ ++AG HS
Sbjct: 437 HSLALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIG-----KVIELVSAGYRHS 491
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAI 407
A VT + + TWG G+HG+LG G+ + P +V +L D V CGS T A
Sbjct: 492 AAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGY-----VACGSTHTLAC 546
Query: 408 SR 409
SR
Sbjct: 547 SR 548
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 176/388 (45%), Gaps = 36/388 (9%)
Query: 8 ETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS 67
ET++ +I+ ++ E+ V ++WG GT G LG G E SP+++
Sbjct: 136 ETDQKLQVVIDKGSTRVLIREDASDV---YTWGEGTRGMLGHGEEDPEASPRVVEALLGH 192
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+ ML G H +AL + G+V+SWG G G+LG G D P + G +
Sbjct: 193 DIKMLCLGSGHTMAL-----AVSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRG--FD 245
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACG 186
ITHI+ NHS V+D+G + G G G LG GD H SP ++ + K V ACG
Sbjct: 246 ITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD--KHVSPTQIHALDGKRVVHAACG 303
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+L +++ +VY G+ + GQLG+ + ++S P + L + IV I+
Sbjct: 304 AAFTLFVIES---GEVYACGNNEHGQLGIGSN--EAMSEPTLVTNLPE-RIVRIACGNSH 357
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS------------FSQAALGWNHVLVL 294
+ ALS G LY W G +S+ + + L LS + A G NH ++L
Sbjct: 358 AVALSETGRLYAW--GAHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIIL 415
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ G + G G L + + AL N +G K I+ G + SA V++
Sbjct: 416 SNSGLLYAFGSGAQGQLGLGPLATKNQATPAAL---PNPEGRKYTAISCGQDISAAVSDR 472
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
I TWG G LGL + + P ++
Sbjct: 473 GKIYTWGSGASNALGLPDGRTKYAPTLI 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGK 92
++++WGA + GQLG G L D LSP + + + V+ ACGG H + L++ G
Sbjct: 366 RLYAWGAHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSN-----SGL 420
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++++G G+ GQLG G + P + T IS G + S VSD G ++T G
Sbjct: 421 LYAFGSGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGS 480
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
G LG D R+ +P + S +K +ACG H
Sbjct: 481 GASNALGLPDGRTKYAPTLIESMADKRCRTVACGFFH 517
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 166/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ P + QQV+ V + G G+ G+LG G D
Sbjct: 167 EAGRNVMVPATAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 221
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 222 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 270
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 271 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 328
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 329 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 384
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 385 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 444
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L G+V G + G L P V + L G
Sbjct: 445 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----LQGKN 499
Query: 338 VIQIAAGAEHSAVVT 352
+ QI+AG HSA T
Sbjct: 500 IRQISAGRCHSAAWT 514
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 30/360 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 154 VYLWGAGRHGQLAEAGR--NVMVPA--TAPSFSQAQQVICGQNCTFVIQA-----NGTVL 204
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 205 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 264
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 265 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 321
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 322 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 380 TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 437
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV + +A GAEH+ + + WG GQLGLG+T P +V +
Sbjct: 438 ---QQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 494
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 302
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + + T+G G++G+LGLGNT ++ P+ V + +Q +V CG T A+S
Sbjct: 303 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG----QVACGLNHTLAVS 357
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 125 bits (313), Expect = 5e-26, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 17/236 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG G+ G LG GR+ D +P +++S L + +A G H LAL +V+
Sbjct: 320 VFIWGMGSQGCLGNGRVDDLETPTQIDISGLF-FNEIAAGAYHSLALAK-----NNQVYG 373
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G + L PK +TFFD + ++ G HS ++ + L+T G+G +
Sbjct: 374 WGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDY 433
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQL 213
+LGHG P K+ + V +A G HSL C+ N+ VY +GS K L
Sbjct: 434 YRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSL-----CITNEGFVYAWGSSKDSVL 488
Query: 214 GVSKDRIRSVSLPQ----VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G+ + + +LPQ ++ D ++A S +LS GHLY WG NS
Sbjct: 489 GMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSNKNS 544
Score = 88.6 bits (218), Expect = 5e-15, Method: Composition-based stats.
Identities = 94/382 (24%), Positives = 159/382 (41%), Gaps = 41/382 (10%)
Query: 5 LMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGT--GRLHDELSPQ-LL 61
+ME+++ GK+ + ++ +E + + + WG +G+LG + +E Q +
Sbjct: 192 MMEKSKDGKTEINICYYYQMLTQESRPEYIAI-VWGNPANGRLGAPKSKFPNESDKQTIF 250
Query: 62 NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
N ++ S + + + PS + S L E ++ + +P+
Sbjct: 251 NNNNPSQMDFTS------RQMQQPSRT------QQVQNSQYNLNQAEPNNSDFIQPIAL- 297
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS---FVNK 178
+ I G +H+ +++ G +F G G+ G LG+G +P ++ F N
Sbjct: 298 ---KQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGLFFN- 353
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+IA G HSL L K+ NQVYG+G RGQLG+ + + I+
Sbjct: 354 ---EIAAGAYHSLALAKN---NQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQ 407
Query: 239 GISANGDRSAALSAEGHLYTWGRG--FNSTSDVNCPQSLPSSLSFSQ------AALGWNH 290
+ SA ++ LYTWG G + + + P + Q ALG H
Sbjct: 408 YLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIH 467
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERV--SSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
L +T +G V G S +L P + T P V L S D Q+AAG HS
Sbjct: 468 SLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDA-SFYQVAAGTSHS 526
Query: 349 AVVTENRAIMTWGWGEHGQLGL 370
++EN + WG ++ LG+
Sbjct: 527 LSLSENGHLYVWGSNKNSLLGV 548
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 82/375 (21%), Positives = 144/375 (38%), Gaps = 37/375 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGGK 92
+V+ WG GQLG G ++L P+ L + L CG H +T+ +
Sbjct: 370 QVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITT-----NKE 424
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG G +LGHG ++D + PK + + ++ G HS +++ G ++ G
Sbjct: 425 LYTWGNGDYYRLGHGMLLDEMEPKKIEIL--QDVYVLDVALGTIHSLCITNEGFVYAWGS 482
Query: 153 GTFGQLGH--GDYRSHSSPVKV----SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
LG Y+ + P +V SF + + +Q+A G HSL L ++ +Y +G
Sbjct: 483 SKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSEN---GHLYVWG 539
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----GDRSAALSAEGHLYTWGR 261
S K LGV +PQ D+E I + + L T+ +
Sbjct: 540 SNKNSLLGVRLQGQEHTCVPQKVEQSEDLEKSCIEKALFFNLKKEEQQMMKDEKLVTFEQ 599
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-SDPER---- 316
+ + + A LG + + G + G + GML +P +
Sbjct: 600 TTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKF 659
Query: 317 ---VSSTRPLSVALEK------VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+ P + E+ + + I+ H VT WG ++ Q
Sbjct: 660 KQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQ 719
Query: 368 LGLGNTCDQIHPKVV 382
LGLG D + ++
Sbjct: 720 LGLGFQSDHVFTPIL 734
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------TSDV 269
+ D I+ ++L Q E V I + AL+ EG ++ WG G D+
Sbjct: 288 NSDFIQPIALKQ--------EFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDL 339
Query: 270 NCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S L F++ A G H L L + +V G ++ G L + + P +
Sbjct: 340 ETPTQIDISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLP-----K 394
Query: 329 KVSNLDGVKVI--QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+++ D K+ + G +HSA +T N+ + TWG G++ +LG G D++ PK + +
Sbjct: 395 QLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQ 454
Query: 387 EFQNRDTQL---EVFC--GSGFTYA 406
+ D L C GF YA
Sbjct: 455 DVYVLDVALGTIHSLCITNEGFVYA 479
Score = 58.2 bits (139), Expect = 8e-06, Method: Composition-based stats.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 14/207 (6%)
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR--SAALSAEGHLYTWGRG 262
+G+ G+LG K + + S Q ++ + ++ + S + Y +
Sbjct: 225 WGNPANGRLGAPKSKFPNESDKQTIFNNNNPSQMDFTSRQMQQPSRTQQVQNSQYNLNQA 284
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ SD P +L F + G +H + LT +G V + G G L + P
Sbjct: 285 EPNNSDFIQPIALKQE--FVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETP 342
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ ++ G+ +IAAGA HS + +N + WG GQLG+GN +Q+ PK +
Sbjct: 343 TQI------DISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQL 396
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAIS 408
F + Q + ++CG + I+
Sbjct: 397 TF---FDRKKIQCQYLYCGDQHSACIT 420
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 85/371 (22%), Positives = 136/371 (36%), Gaps = 55/371 (14%)
Query: 36 VWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVI 89
V++WG+ D LG T + D+ PQ + L S S S +A G +H L+L+
Sbjct: 477 VYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSE----- 531
Query: 90 GGKVFSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWN----HSGFVS 142
G ++ WG + LG G+ P+ V + + + +N +
Sbjct: 532 NGHLYVWGSNKNSLLGVRLQGQE-HTCVPQKVEQSEDLEKSCIEKALFFNLKKEEQQMMK 590
Query: 143 D--------SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
D + + T T GQ Y+ + K + F++ H ACG +L
Sbjct: 591 DEKLVTFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLC 650
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
K+ Q K Q KD P + + I IS + A+
Sbjct: 651 KNPHKKQ-------KFKQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAV 703
Query: 251 SAEGHLYTWGR--------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGE 299
+A+G+ Y WG GF S V P L ++ A G +LT GE
Sbjct: 704 TAKGNAYCWGSNQYNQLGLGFQS-DHVFTPILLEGAIEQKVIIMAITGEKFSALLTDQGE 762
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G S G+L + V +E D +I +A + + + + +
Sbjct: 763 VWSFGTSEFGVLG-----HELKNFYVIMEPRMINDIPSMINLACSNQTMFAIDQKQQLWA 817
Query: 360 WGWGEHGQLGL 370
WG + GQLG+
Sbjct: 818 WGNNQFGQLGI 828
Score = 41.2 bits (95), Expect = 1.0, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRY 126
+ ++C H +A+T+ G + WG QLG G D ++ P+ +G +
Sbjct: 690 IRYISCQYNHCIAVTAK-----GNAYCWGSNQYNQLGLGFQSDHVF-TPI-LLEGAIEQK 742
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIA 184
I G S ++D G +++ G FG LGH ++ P ++ ++ +A
Sbjct: 743 VIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDI--PSMINLA 800
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
C + + + Q++ +G+ + GQLG+S R
Sbjct: 801 CSNQTMFAIDQK---QQLWAWGNNQFGQLGISLQR 832
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 175/377 (46%), Gaps = 74/377 (19%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G GQLG G L D L P++ NLS L +V +AC H A+ S G++++WG
Sbjct: 66 WGYGGCGQLGFGNLEDCLVPRV-NLS-LKNVIQVACSDRHTAAILS-----NGELYTWGC 118
Query: 99 GSSGQLGHGEMVDAL------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+G+LGHG+ ++ P V +G + + +S G H+G ++D T G
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQPMKVKALEGEK--VIQVSCGSYHTGCLTDDKKALTWGL 176
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD + +P + S + +I+CG H+ +LL + ++Y FG G G+
Sbjct: 177 GLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILL---VTGKLYMFGGGAFGK 233
Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
LG V +P++ G L DI+I +S SAA++ G +YTWG+G
Sbjct: 234 LGFGS--TDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--------- 282
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
LG H+ G H LS P+R +S
Sbjct: 283 ------------GRLG--HI-----------FNGPEHDFLS-PKR-------------LS 303
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
NL+ ++ I+ G HS +++ I TWG ++ +G+ IHP + + QN+
Sbjct: 304 NLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN----IGHGIQGIHPNMPSKHPILQNK 359
Query: 392 DTQLEVFCGSGFTYAIS 408
+ ++V C S + A+S
Sbjct: 360 NI-VQVVCSSSHSIALS 375
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 33/332 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFTC 150
V WG GQ HG + + P P DG R+ +I+ +S G N+S +++SG L
Sbjct: 10 VVVWGSTEYGQ--HGSKGEEVSPGP-HLVDGLRHLSSISKVSCGSNYSAAITNSGDLILW 66
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G GQLG G+ P S KNV Q+AC RH+ +L + ++Y +G K
Sbjct: 67 GYGGCGQLGFGNLEDCLVPRVNLSL--KNVIQVACSDRHTAAILSN---GELYTWGCSKN 121
Query: 211 GQLGVSKDRI----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-- 264
G+LG + + VS P L +++ +S + L+ + TWG G
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 265 ----STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T D+ P+ + S L + + G +H +L G++ M GG G L
Sbjct: 182 LGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLG----FG 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW-GEHGQLGLGNTCDQI 377
ST + + L+ +++ +++ G++HSA VT+ + TWG G G + G D +
Sbjct: 238 STDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFL 297
Query: 378 HPK-VVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
PK + NL F +++ CG+ + A+S
Sbjct: 298 SPKRLSNLEKAF-----IVDISCGNSHSVALS 324
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 20/238 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS----PQLLNLSSL--SSVSMLACGGAHVLALTSPSSV 88
++++WG +G+LG G+ +S Q + + +L V ++CG H LT
Sbjct: 112 ELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDK-- 169
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
K +WG G G+LGHG+ D PK + G I IS G +H+ + +G L+
Sbjct: 170 ---KALTWGLGLQGRLGHGDTQDIFTPKLIESLAG--LPIKEISCGGHHTAILLVTGKLY 224
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G G FG+LG G P + + + +++ G +HS + K C +VY +G
Sbjct: 225 MFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTK-C--GKVYTWGQ 281
Query: 208 GKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G G+LG + P+ L IV IS S ALS G +YTWG N
Sbjct: 282 G--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN 337
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 27/246 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K +WG G G+LG G D +P+L+ + + ++CGG H L ++ GK++
Sbjct: 170 KALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL-----LVTGKLY 224
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+G G+ G+LG G D L P+ +G IT +S G HS V+ G ++T G
Sbjct: 225 MFGGGAFGKLGFGSTDDVLIPR---LLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ 281
Query: 153 GTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G+LGH G SP ++S+ + I+CG HS V L D +Y +G K
Sbjct: 282 G--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHS-VALSDV--GDIYTWGMTK 336
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
G+ ++P L + IV + + S ALS G L +S+
Sbjct: 337 NIGHGIQGIH---PNMPSKHPILQNKNIVQVVCSSSHSIALSDIGAL------VQKSSET 387
Query: 270 NCPQSL 275
PQSL
Sbjct: 388 RKPQSL 393
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
++ +++CG +S + G+ + +G G GQLG + +P+V + L ++ +
Sbjct: 43 SISKVSCGSNYSAAITNS--GDLIL-WGYGGCGQLGFG--NLEDCLVPRVNLSLKNV--I 95
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN------------STSDVNCPQSLPS--SLSFSQA 284
++ + +AA+ + G LYTWG N S + V+ P + + Q
Sbjct: 96 QVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV 155
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
+ G H LT D + L G G L + P + + +L G+ + +I+ G
Sbjct: 156 SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTP-----KLIESLAGLPIKEISCG 210
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL-EVFCGSGF 403
H+A++ + +G G G+LG G+T D + P+++ E D Q+ +V GS
Sbjct: 211 GHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLL----EGPLEDIQITKVSLGSQH 266
Query: 404 TYAISR 409
+ A+++
Sbjct: 267 SAAVTK 272
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 161/357 (45%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E+ P+ V + CG H L G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLE-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G +H+ ++D G +F+ G G+ G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--IIVALSCGESHTLALNDKGQVFSWGLGSDG 114
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG ++ P + S + V Q+ACG HSL L K G ++ +G + GQLG+
Sbjct: 115 QLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSK---GGHIFSWGQNRYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+S+S+PQ L I I+A G S AL+ G ++ WGR G N T+D
Sbjct: 172 GMTG-QSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + S + G +H LT +G V G +G L P
Sbjct: 231 CFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIM-TWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H+ T + M ++G G +GQLG +TC++ P V
Sbjct: 286 RKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVK 342
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + + P+ FF G R + + G H+ F+ + G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKR--VRDVGCGRRHTAFLLEDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + + + ++CG H+L L QV+ +G G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQIIVALSCGESHTLALNDK---GQVFSWGLGSD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG++ + +P+ L D+++ ++ S ALS GH+++WG+ G
Sbjct: 114 GQLGLNNFE-ECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG 172
Query: 265 ST-SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
T ++ PQ L S + F+Q A G H LT G V G + G L +
Sbjct: 173 MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCF 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P AL K L +VI I+ G +H+A +T+ + T+G G +GQLG +T +++P+
Sbjct: 233 P---ALLKA--LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRK 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G +S PQ +L SL + + +A GGAH ALT + G
Sbjct: 158 IFSWGQNRYGQLGLGMTGQSISVPQ--HLQSLQGIPFAQIAAGGAHSFALT-----LSGA 210
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF WGR GQLG + D +P + R + +IS G +H+ ++ G +FT G
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRCFPALLKALRSQR--VIYISCGEDHTAALTKEGGVFTFGA 268
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QIACG +H+L ++ FG G GQ
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPS--SGKMDSFGLGGNGQ 326
Query: 213 LGVSKDRIRSVSLP 226
LG R P
Sbjct: 327 LGTRSTCNRKSPAP 340
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 27/284 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G GQLG + + P+ + + L+CG +H LAL G+VFS
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEQVVALDAQIIVALSCGESHTLALND-----KGQVFS 107
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GS GQLG + + P+ + + ++ G+ HS +S G +F+ G
Sbjct: 108 WGLGSDGQLGLNNFEECIRVPRNIKSLSD--VQVAQVACGYWHSLALSKGGHIFSWGQNR 165
Query: 155 FGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G +S S P + S QIA G HS L L V+G+G K GQL
Sbjct: 166 YGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFAL---TLSGAVFGWGRNKFGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G++ R P + L ++ IS D +AAL+ EG ++T+G G NST+
Sbjct: 223 GLNDTNDR--CFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 268 DVNCPQSLPSSLS--FSQAALGWNHVLVLT---GDGEVLMLGGS 306
P+ + + +Q A G H L T G + LGG+
Sbjct: 281 HEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN 324
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V+SWG G+DGQLG + + P+ N+ SLS V + +ACG H LAL+ GG
Sbjct: 104 QVFSWGLGSDGQLGLNNFEECIRVPR--NIKSLSDVQVAQVACGYWHSLALSK-----GG 156
Query: 92 KVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+FSWG+ GQLG G ++ P+ + G + I+AG HS ++ SG +F
Sbjct: 157 HIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPF--AQIAAGGAHSFALTLSGAVFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + + ++ V I+CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 29/362 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG G+LG G + +E + P+ ++ S V + CG +H L LT G
Sbjct: 1 MAIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE-----G 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPK-PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
K+++ G GQLGH +D L K P Y IT IS G HS +++ G +F+
Sbjct: 56 KMYACGNNDHGQLGHD--LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSW 113
Query: 151 GDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G GQLGH + +P + + K+V QIA G H L L + ++Y +GS
Sbjct: 114 GSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNN---GELYAWGSNS 170
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG+ V +P + L + I I+ G+ S A+S G ++ WG+ G
Sbjct: 171 YGQLGIGTTS-EKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N + P L + SL + G + + LT +G V G G L +
Sbjct: 230 NDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV 289
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHPK 380
P KV L G K+ QIA G H+ +R I +G G GQLG+G + P+
Sbjct: 290 P-----RKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQ 344
Query: 381 VV 382
+V
Sbjct: 345 IV 346
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ + GQLG G +++ P L+ + ++ +ACGG H A++ G +
Sbjct: 162 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK-----SGAI 216
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG ++ YP + + +IS G + S F+++ G +FTCG G
Sbjct: 217 FGWGKNTFGQLGLNDLNSRCYPTQLRTL--RSLGVRYISCGDDFSVFLTNEGGVFTCGAG 274
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
TFGQLGHG + P KV + + QIACG RH+L + ++YGFG G GQL
Sbjct: 275 TFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPS--RGKIYGFGLGGVGQL 332
Query: 214 GVSKDRIRSVSLPQVTIG 231
G+ + + S PQ+ G
Sbjct: 333 GIG--MVGNHSTPQIVRG 348
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 40/269 (14%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
++ G+ G+LG G P K+ V ++ CG H+L L K+ ++Y
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE---GKMYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G+ GQLG D + + PQ L + I IS S AL+ G +++WG N
Sbjct: 60 CGNNDHGQLGHDLDTLPN-KRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS--N 116
Query: 265 STSDV-----NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGML-- 311
+ + N Q P + Q A G H L LT +GE+ G + +G L
Sbjct: 117 AVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGI 176
Query: 312 -SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
+ E+V P+ ++ +L GV + IA G HS V+++ AI WG GQLGL
Sbjct: 177 GTTSEKV----PMPTLIQ---SLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Query: 371 GNTCDQIHP-----------KVVNLGDEF 388
+ + +P + ++ GD+F
Sbjct: 230 NDLNSRCYPTQLRTLRSLGVRYISCGDDF 258
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 160/351 (45%), Gaps = 33/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG G + L P + + LS V +A G +H LA+ S G V+
Sbjct: 166 TVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSGVVSVAAGSSHSLAVLSD-----GSVW 218
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SSGQLG G ++ L P V G + HS V G ++T G +
Sbjct: 219 AWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAA----HSLAVRSDGTVWTWGANS 274
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G PV+V V G HSL L D V+ +G GQLG
Sbjct: 275 FGQLGDGTKSDRLVPVRVQGL--SGVVASDVGSYHSLALRSD---GSVWAWGHNSSGQLG 329
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
D S S+P GL + ++A S A+ ++G ++ WG RG +T++
Sbjct: 330 --DDSSTSRSVPVQVRGLSGG--MAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNN 385
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + A G+NH L DG V G + G L D +ST P+
Sbjct: 386 RASPVQVQGLGGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPV----- 440
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV + +AAG +HS + + ++ WG +GQLG G T +++ P
Sbjct: 441 QVQGLSGV--VAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVP 489
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 159/346 (45%), Gaps = 39/346 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG G + SP + + LS V +A G H LAL S G V+
Sbjct: 416 SVWAWGSNDSGQLGDGTTRNSTSP--VQVQGLSGVVAVAAGFDHSLALRSD-----GSVW 468
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G + L P V G + ++AG NHS V G ++T G
Sbjct: 469 AWGSNAYGQLGEGTTTNRLVP--VQVLSG----VVAVAAGSNHSLAVRSDGTVWTWGSNL 522
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + PV+V V +A G HSL + D V+ +GS G+LG
Sbjct: 523 YGQLGDGTTSNRLVPVQVQGL--SGVAAVAAGSFHSLAVHSD---GSVWAWGSNSSGELG 577
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ +R+ +P ++ G V ++A G S + ++G ++TWG G +T
Sbjct: 578 DGTTSNRLVPGRVPGLSGG------VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTT 631
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ + P + G +H L + DG V G + +G L D + P+
Sbjct: 632 TSRSVPVQVQGLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPV--- 688
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+V L GV + +A GA H VV + + WG+ GQLG G+
Sbjct: 689 --QVPGLSGV--VAMATGALHPLVVRSDGTVWAWGYNSFGQLGNGS 730
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 157/351 (44%), Gaps = 35/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ G+ G G ++ SP + + L +A G H LA S G V+
Sbjct: 366 TVWAWGSNFSGERGEGTTNNRASP--VQVQGLGGGVAVAAGFNHSLAARSD-----GSVW 418
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SGQLG G ++ P V G + ++AG++HS + G ++ G
Sbjct: 419 AWGSNDSGQLGDGTTRNSTSPVQVQGLSG----VVAVAAGFDHSLALRSDGSVWAWGSNA 474
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + PV+V S V +A G HSL + D V+ +GS GQLG
Sbjct: 475 YGQLGEGTTTNRLVPVQVLS----GVVAVAAGSNHSLAVRSD---GTVWTWGSNLYGQLG 527
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R V P GL + V +A S A+ ++G ++ WG G +TS+
Sbjct: 528 DGTTSNRLV--PVQVQGLSGVAAV--AAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSN 583
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P +P A G H LV+ DG V G + G L D S + P+
Sbjct: 584 RLVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPV----- 638
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV + + AG HS V + + TWG+ +GQLG G T + P
Sbjct: 639 QVQGLSGV--VAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP 687
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 153/351 (43%), Gaps = 35/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG + GQLG P + + LS + G +H LA+ S G V+
Sbjct: 316 SVWAWGHNSSGQLGDDSSTSRSVP--VQVRGLSGGMAVTAGSSHSLAVGSD-----GTVW 368
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SG+ G G + P V G ++AG+NHS G ++ G
Sbjct: 369 AWGSNFSGERGEGTTNNRASPVQVQGLGGG----VAVAAGFNHSLAARSDGSVWAWGSND 424
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G R+ +SPV+V V +A G HSL L D V+ +GS GQLG
Sbjct: 425 SGQLGDGTTRNSTSPVQVQGL--SGVVAVAAGFDHSLALRSD---GSVWAWGSNAYGQLG 479
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R V + QV G +V ++A + S A+ ++G ++TWG G +TS+
Sbjct: 480 EGTTTNRLVPV-QVLSG-----VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSN 533
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + + A G H L + DG V G + G L D + P
Sbjct: 534 RLVPVQVQGLSGVAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVP-----G 588
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L G + +AAG HS VV + + TWG G+LG G T + P
Sbjct: 589 RVPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVP 637
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 167/385 (43%), Gaps = 41/385 (10%)
Query: 7 EETEKGKSALINNAKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLN 62
E+T +G ++ ++ ++ VW+ G+ GQLG G + +P +
Sbjct: 34 EQTSRGAPLRDAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAP--VQ 91
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
+ LS V +A G +H LA+ G V++WG S GQLG G L P V
Sbjct: 92 VPGLSGVVAVAAGSSHSLAVRHD-----GTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS 146
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G + ++AG ++S V G ++ G GQLG G + PV+V V
Sbjct: 147 G----VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGL--SGVVS 200
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGI 240
+A G HSL +L D V+ +G+ GQL G +R+ V +P ++ +V +
Sbjct: 201 VAAGSSHSLAVLSD---GSVWAWGANSSGQLGDGTKINRLVPVQVPGLS------GVVAV 251
Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+A S A+ ++G ++TWG G + SD P + + +G H L L
Sbjct: 252 AAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDVGSYHSLAL 311
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
DG V G + G L D S + P+ +V L G + + AG+ HS V +
Sbjct: 312 RSDGSVWAWGHNSSGQLGDDSSTSRSVPV-----QVRGLSG--GMAVTAGSSHSLAVGSD 364
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHP 379
+ WG G+ G G T ++ P
Sbjct: 365 GTVWAWGSNFSGERGEGTTNNRASP 389
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 144/344 (41%), Gaps = 38/344 (11%)
Query: 47 LGTGRLHDELSPQLLN---LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
+G G DE + Q L S + LA G ++ LAL G V++ G GQ
Sbjct: 23 VGCGLPTDESAEQTSRGAPLRDAPSRARLAAGSSYSLALRPD-----GTVWATGSNDLGQ 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G + P V G + ++AG +HS V G ++ G + GQLG G
Sbjct: 78 LGDGTTTNHSAPVQVPGLSG----VVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTT 133
Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIR 221
+PV+V V +A G +SL + D V+ +GS GQL G + +R+
Sbjct: 134 TMRLTPVRVQGL--SGVVSVAAGSSYSLAVRSD---GTVWAWGSNFSGQLGDGTTSNRLV 188
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN--CPQSL 275
V +P ++ +V ++A S A+ ++G ++ WG + +N P +
Sbjct: 189 PVQVPGLS------GVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQV 242
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
P A G H L + DG V G + G L D + P+ +V L G
Sbjct: 243 PGLSGVVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPV-----RVQGLSG 297
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V + G+ HS + + ++ WG GQLG ++ + P
Sbjct: 298 VVASDV--GSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVP 339
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG S GQ G G + + P+P + H + ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLGH S P ++ + +++ +ACG HS+ L Q++ +G+G GQ
Sbjct: 61 NTKGQLGHD--CEGSKPEQIGALAGQHIVHVACGESHSVALSDQ---GQLFSWGAGSDGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG++ +V++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 116 LGLTTIE-DAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ--NSYGQLGLG 172
Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ PS S +Q A G H L+ G V G + G L +
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 233 PCHVKL-----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRR 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G G + PQ+ +V +ACGG H + L G+V++
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + GQLGH + P+ + G I H++ G +HS +SD G LF+ G G+ G
Sbjct: 59 GLNTKGQLGHD--CEGSKPEQIGALAGQH--IVHVACGESHSVALSDQGQLFSWGAGSDG 114
Query: 157 QLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG + + P + + + Q++CG H L L D Q + +G GQLG+
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAAD---GQFFTWGQNSYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
K+ S PQ L I + ++A G S ALS G ++ WG+ G + D
Sbjct: 172 GKECPSQAS-PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDR 230
Query: 270 NCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G H VLT G V G G L P
Sbjct: 231 ESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ SSGQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPS--SGMIYAFGCGTRGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG + GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G ++ I+ G +H+ FV SG ++ G GT
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 175/387 (45%), Gaps = 42/387 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG---AHVLALTSPSSVIGGK 92
V SWGAG GQLG G L D LSP + V ++ GG A AL
Sbjct: 47 VLSWGAGRTGQLGNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALARTDKT---- 102
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V SWG SSGQLG+G + P V I ++AG H+ + SG +++ GD
Sbjct: 103 VKSWGHNSSGQLGNGGNTNQTVPTTVPRL----TDIKDVAAGGKHALALDTSGQVYSWGD 158
Query: 153 GTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
++GQLG+ GD R + P +V V QI+ G SL LL++ +VY +G G
Sbjct: 159 NSYGQLGNNRTGDSR--TVPDRVQGM--PKVKQISAGCDFSLALLEN---GKVYAWGRGI 211
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG SV P+ GL + IV I A + AL+A+ + +WG G
Sbjct: 212 HGQLGTGNRATSSV--PRQVQGLEN--IVEIDAGCYHALALTADDTVKSWGYNLYGQLGN 267
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER---VSST 320
+ST P + S G H V T D V G + +G L + + + +
Sbjct: 268 SSTKSSTLPVDVDWIEGVSDIEAGAFHNYVKTSDSHVWGWGNNQYGQLLESDEAFDANVS 327
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP- 379
R A ++ L+GV+ +AAGA H VT + + TWG GQLG G T +
Sbjct: 328 RTNRTAPVEIPRLEGVQ--HLAAGARHGVAVTADD-VFTWGHNGEGQLGNGTTVARYESV 384
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYA 406
K++N G +N + V G TYA
Sbjct: 385 KILNEGSAIKN----VAVSLGGNTTYA 407
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 20/230 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG + GQLG R D + P + + V ++ G LAL + GKV
Sbjct: 152 QVYSWGDNSYGQLGNNRTGDSRTVPD--RVQGMPKVKQISAGCDFSLAL-----LENGKV 204
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG GQLG G + P+ V + I I AG H+ ++ + + G
Sbjct: 205 YAWGRGIHGQLGTGNRATSSVPRQVQGLE----NIVEIDAGCYHALALTADDTVKSWGYN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG+ +S + PV V + V I G H+ V D V+G+G+ + GQL
Sbjct: 261 LYGQLGNSSTKSSTLPVDVDWI--EGVSDIEAGAFHNYVKTSDS---HVWGWGNNQYGQL 315
Query: 214 GVSKDRIRS-VSLPQVTIGLHDIEIVGIS--ANGDRSAALSAEGHLYTWG 260
S + + VS T + + G+ A G R ++TWG
Sbjct: 316 LESDEAFDANVSRTNRTAPVEIPRLEGVQHLAAGARHGVAVTADDVFTWG 365
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV++WG G GQLGTG P+ + L ++ + G H LALT+ +V
Sbjct: 203 KVYAWGRGIHGQLGTGNRATSSVPR--QVQGLENIVEIDAGCYHALALTADDTVK----- 255
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG GQLG+ + P V + +G ++ I AG H+ + ++ G+
Sbjct: 256 SWGYNLYGQLGNSSTKSSTLPVDVDWIEG----VSDIEAGAFHNYVKTSDSHVWGWGNNQ 311
Query: 155 FGQLGHGD--------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+GQL D + ++PV++ + V +A G RH + + D V+ +G
Sbjct: 312 YGQLLESDEAFDANVSRTNRTAPVEIPRL--EGVQHLAAGARHGVAVTAD----DVFTWG 365
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
GQLG R S+ + G I+ V +S G+ + A
Sbjct: 366 HNGEGQLGNGTTVARYESVKILNEG-SAIKNVAVSLGGNTTYA 407
>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
Length = 1120
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 67/384 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G LG G + + P+L+ + ++V +ACG H A+T + G+++
Sbjct: 298 EVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVT-----MAGELY 352
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ +G LGHG V PK + +G I ++ G H+ V+ +G LFT G
Sbjct: 353 TWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEG--LQIAFVACGPWHTALVTSTGQLFTFG 410
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD ++ S P +V S + +ACG+ H+ +++ + SGK
Sbjct: 411 DGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGK-- 468
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
T G D +G +GD+ A L C
Sbjct: 469 ---------------LFTWGDGDKNRLG---HGDKEARLKP-----------------TC 493
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
+L S +F + A G + LT G V +G + +G L +P+ + KV
Sbjct: 494 VAALIDS-NFHKIACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQ----------SDGKVP 542
Query: 332 NLDGVKVI-----QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
L G K+ +IA GA H AV+T + TWG G +G+LG G+ D+ P +V +
Sbjct: 543 CLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALV---E 599
Query: 387 EFQNRDTQLEVFCGSGFTYAISRH 410
++R + + CGS ++ AI H
Sbjct: 600 ALKDRHVKY-IACGSNYSAAICLH 622
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 193/416 (46%), Gaps = 54/416 (12%)
Query: 27 EEEEQQVVKVWSWG---------AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGA 77
+++ + V+ WG G+D + + D L P+ L + V + CG
Sbjct: 28 QDDCDSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVR 87
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
H +T G VF+WG S G+LGHG D+++P+ V + ++ G H
Sbjct: 88 HAALVTR-----NGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA--CNVDFVACGEFH 140
Query: 138 SGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLL 194
+ V+ +G L+T GDGT G LGHG H P ++S ++ V ++CG H+ ++
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALIT 200
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS--- 251
+G Q++ FG G G LG + S+S P+ L ++ + ++ +AA+
Sbjct: 201 S--MG-QLFTFGDGSFGVLG--HGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255
Query: 252 --------AEGHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+ G L+TWG G S C SL F + A G + + L
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID-YDFYRVACGHSLTVCL 314
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T G+VL +G S +G L +P S R + ++++ G V+Q+A G+ H AV+T
Sbjct: 315 TTSGKVLSMGNSVYGQLGNPN--SDGRLPCLVEDRIA---GEHVLQVACGSYHVAVLTGR 369
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ TWG G +G+LG G+ D+ P V + ++R + + CG+ FT AI H
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 421
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P + +ACG + + LT+ GKV
Sbjct: 267 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 321
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G GQLG+ D P V + + ++ G H ++ +FT G G
Sbjct: 322 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 379
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G+LGHGD P +V + ++ V IACG + + CL V G
Sbjct: 380 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 426
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 155/351 (44%), Gaps = 33/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G LSP + + L+ V L+ GG H LA+ + G V+
Sbjct: 166 TVWAWGDNASGQLGDGTATRRLSP--VQVPGLTDVVALSAGGYHSLAVRTD-----GTVW 218
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SGQLG G L P V+ + +SA +++ + G ++ G +
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSGLT----NVVALSADDSYTLALRTDGTVWAWGYNS 274
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G SPV+V NV ++ G HSL L D V+ +G GQLG
Sbjct: 275 YGQLGDGTTTPRLSPVQVPGL--TNVVALSAGYSHSLALRTD---GTVWAWGYNYNGQLG 329
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
RS S+P GL I++V +SA S AL +G ++ WG G +T
Sbjct: 330 NGIPTQRSPSIP--VFGL--IDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIP 385
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P +P + G +H L L DG V G ++ G L D P+ V
Sbjct: 386 RPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVP-- 443
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
D V+ ++AG H+ + N + WG GQLG G T ++ P
Sbjct: 444 -----DLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSP 489
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 157/356 (44%), Gaps = 37/356 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG + GQLG G SP + + L+ V L+ G +H LAL + G V
Sbjct: 366 TVWAWGYNSLGQLGDGTTIPRPSP--VQVPDLTDVVALSAGDSHSLALRTD-----GTVR 418
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SGQLG G L P V + +SAG NH+ + +G ++ G +
Sbjct: 419 AWGVNYSGQLGDGTTTHRLSPVQVPDLT----DVVALSAGGNHTLALRTNGTVWAWGSNS 474
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G SPV++ NV ++ G HSL + D V+ +GS GQLG
Sbjct: 475 DGQLGDGTTTPRLSPVQMLGL--TNVVALSAGYYHSLAVHTD---GTVWAWGSNSDGQLG 529
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ R+ V +P +T ++V +SA S AL +G ++ WG G +T
Sbjct: 530 DGTTTHRLTPVQVPGLT------DVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTT 583
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ P +P + G H L L DG V G +++G L D P+
Sbjct: 584 TPRGSPVQVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPV--- 640
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
VSNL G + AGA HS + + WG GQLG G + +HP V
Sbjct: 641 --LVSNLTGTS--NLYAGAGHSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 165/363 (45%), Gaps = 42/363 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ + GQLG G LS + + L+ V L+ G ++ LAL + G V+
Sbjct: 66 TVWAWGSNSSGQLGDGTTTPRLSS--VQVPGLTDVVALSAGSSYTLALRTD-----GTVW 118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G L P V + +S+G HS + G ++ GD
Sbjct: 119 AWGYNFYGQLGDGTTTPRLAPVQVPGLT----DVVALSSGIYHSLALRTDGTVWAWGDNA 174
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
GQLG G SPV+V +V ++ G HSL + D V+ +GS GQL
Sbjct: 175 SGQLGDGTATRRLSPVQVPGL--TDVVALSAGGYHSLAVRTD---GTVWAWGSNFSGQLG 229
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
G + R+ V + +T +V +SA+ + AL +G ++ WG G +T
Sbjct: 230 DGTATPRLSPVQVSGLT------NVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTT 283
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--PERVSSTRPLS 324
+ P +P + + G++H L L DG V G +++G L + P + S + P+
Sbjct: 284 TPRLSPVQVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPV- 342
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVN 383
+ V+ ++AG HS + + + WG+ GQLG G T + P +V +
Sbjct: 343 --------FGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPD 394
Query: 384 LGD 386
L D
Sbjct: 395 LTD 397
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 158/345 (45%), Gaps = 37/345 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ + GQLG G SP + + L+ V L+ G H LAL + G V+
Sbjct: 16 TVWAWGSNSSGQLGDGTTTPRGSP--VQVPGLTDVVALSAGNHHCLALRTD-----GTVW 68
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SSGQLG G L V + +SAG +++ + G ++ G
Sbjct: 69 AWGSNSSGQLGDGTTTPRLSSVQVPGLT----DVVALSAGSSYTLALRTDGTVWAWGYNF 124
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
+GQLG G +PV+V +V ++ G+ HSL L D V+ +G GQL
Sbjct: 125 YGQLGDGTTTPRLAPVQVPGL--TDVVALSSGIYHSLALRTD---GTVWAWGDNASGQLG 179
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVN 270
G + R+ V +P +T ++V +SA G S A+ +G ++ WG F+
Sbjct: 180 DGTATRRLSPVQVPGLT------DVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLGDGTA 233
Query: 271 CPQSLPSSLS--FSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P+ P +S + AL + + L L DG V G + +G L D P+ V
Sbjct: 234 TPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQV- 292
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
++N V+ ++AG HS + + + WG+ +GQLG G
Sbjct: 293 -PGLTN-----VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG 331
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 174/424 (41%), Gaps = 79/424 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG + GQLG G LSP + + L++V L+ G +H LAL + G V+
Sbjct: 266 TVWAWGYNSYGQLGDGTTTPRLSP--VQVPGLTNVVALSAGYSHSLALRTD-----GTVW 318
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +GQLG+G PV + +SAG++HS + G ++ G +
Sbjct: 319 AWGYNYNGQLGNGIPTQRSPSIPVFGL----IDVVALSAGYSHSLALRTDGTVWAWGYNS 374
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G SPV+V +V ++ G HSL L D V +G GQLG
Sbjct: 375 LGQLGDGTTIPRPSPVQVPDL--TDVVALSAGDSHSLALRTD---GTVRAWGVNYSGQLG 429
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ R+ V +P +T ++V +SA G+ + AL G ++ WG G +T
Sbjct: 430 DGTTTHRLSPVQVPDLT------DVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT 483
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV- 325
+ P + + + G+ H L + DG V G + G L D P+ V
Sbjct: 484 TPRLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVP 543
Query: 326 ALEKVSNL----------------------------DGV--------------KVIQIAA 343
L V L DG V+ ++A
Sbjct: 544 GLTDVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLTDVVALSA 603
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
G HS + + + WG +GQLG G T ++ P +V+ N ++ G+G
Sbjct: 604 GGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVS------NLTGTSNLYAGAGH 657
Query: 404 TYAI 407
+ A+
Sbjct: 658 SLAL 661
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 26/261 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++AG++HS + G ++ G + GQLG G SPV+V +V ++ G H
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGL--TDVVALSAGNHHC 58
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
L L D V+ +GS GQLG + R+ SV +P +T ++V +SA +
Sbjct: 59 LALRTD---GTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLT------DVVALSAGSSYTL 109
Query: 249 ALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL +G ++ WG F +T+ P +P + G H L L DG V
Sbjct: 110 ALRTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVALSSGIYHSLALRTDGTVWA 169
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + G L D ++TR LS +V L V+ ++AG HS V + + WG
Sbjct: 170 WGDNASGQLGDG---TATRRLSPV--QVPGL--TDVVALSAGGYHSLAVRTDGTVWAWGS 222
Query: 363 GEHGQLGLGNTCDQIHPKVVN 383
GQLG G ++ P V+
Sbjct: 223 NFSGQLGDGTATPRLSPVQVS 243
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 136/319 (42%), Gaps = 35/319 (10%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+A G +H LAL + G V++WG SSGQLG G P V + +
Sbjct: 1 MAAGYSHSLALHTD-----GTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLT----DVVAL 51
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG +H + G ++ G + GQLG G S V+V +V ++ G ++L
Sbjct: 52 SAGNHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGL--TDVVALSAGSSYTL 109
Query: 192 VLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
L D V+ +G GQL G + R+ V +P +T ++V +S+ S A
Sbjct: 110 ALRTD---GTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLT------DVVALSSGIYHSLA 160
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L +G ++ WG G + + P +P + G H L + DG V
Sbjct: 161 LRTDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAW 220
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + G L D P+ +VS L V+ ++A ++ + + + WG+
Sbjct: 221 GSNFSGQLGDGTATPRLSPV-----QVSGL--TNVVALSADDSYTLALRTDGTVWAWGYN 273
Query: 364 EHGQLGLGNTCDQIHPKVV 382
+GQLG G T ++ P V
Sbjct: 274 SYGQLGDGTTTPRLSPVQV 292
>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1096
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 162/385 (42%), Gaps = 76/385 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV++WG + G+LG G D P L+ + ++ ++ACG H A++ + F
Sbjct: 111 KVFTWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNF-----F 165
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG + PK V F DG R + ++ G HS + +G LFT G
Sbjct: 166 TWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLR--VVSVACGSWHSALATSNGKLFTFG 223
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD S P +V ++ACG+ H+ +++ F SG
Sbjct: 224 DGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIE-------VAFQSGSN- 275
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-----ST 266
++ L+TWG G
Sbjct: 276 ---------------------------------------ASSWKLFTWGDGDKFRLGHGN 296
Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
D+ + S L +F Q A G + LT G V +G + +G L +P L
Sbjct: 297 KDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTL 356
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
L G + +I+ GA H A VT + TWG G +G+LG G+T D+ P +V
Sbjct: 357 VQ-----DKLLGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLV- 410
Query: 384 LGDEFQNRDTQLE-VFCGSGFTYAI 407
+D L+ + CGS FT +
Sbjct: 411 ----LALKDRHLKNISCGSNFTSCV 431
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + +ACG +ALT+ G VF
Sbjct: 280 KLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTT-----SGHVF 334
Query: 95 SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G +GQLG+ G++ + K + F I IS G +H V+ L+T
Sbjct: 335 TMGSTENGQLGNPNAAGKVPTLVQDKLLGEF------IEEISCGAHHVAAVTSRSELYTW 388
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS--- 207
G G+ G+LGHGD SP V + ++++ I+CG C+ NQ Y G+
Sbjct: 389 GKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSN-----FTSCVCNQKYVSGTDQS 443
Query: 208 ---GKRGQLGVSKDR 219
G R G+++ R
Sbjct: 444 VCFGCRQPFGLTRIR 458
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGE 299
A +S EG ++TWG G D P P ++ A G H ++
Sbjct: 104 AIVSREGKVFTWGEESGGRLGHGIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDN 163
Query: 300 VLMLG-GSHH-GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G G+H+ G+L +S P SV LDG++V+ +A G+ HSA+ T N +
Sbjct: 164 FFTWGDGTHNVGLLGHGNEISHWIPKSVN----GFLDGLRVVSVACGSWHSALATSNGKL 219
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
T+G G G LG G+ ++PK V L + ++V CG T AI
Sbjct: 220 FTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKT----VKVACGVWHTAAI 265
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 166/368 (45%), Gaps = 46/368 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
V WG+ T GQLG G L +E + S +V + +ACG H L + G+V
Sbjct: 11 VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKK-----DGRV 65
Query: 94 FSWGRGSSGQLGHGE------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
S G GQLGH + ++D+L G R + S+G HS ++D+G +
Sbjct: 66 LSCGNNDYGQLGHEKPCKRPALIDSL---------GER-NVLQASSGTKHSTVLTDAGQV 115
Query: 148 FTCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
FT G QLG G D S S P V + V Q+ACG H++ L Q+Y +
Sbjct: 116 FTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTAT---GQIYTW 172
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
GS GQLG++ ++ PQ + + IV ++A D + L+ G L+ WG
Sbjct: 173 GSNNHGQLGLANKTPQNE--PQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFG 230
Query: 261 -RGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G D P +L +L A G +H L LT DG V G +G L
Sbjct: 231 QLGVGDDQDRGAP-TLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTS 289
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ P KV L G V QIA G +HS A V + + +G G +GQLG G+T +
Sbjct: 290 NNELLP-----RKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVN 344
Query: 376 QIHPKVVN 383
++ P +V
Sbjct: 345 RMSPAMVK 352
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 120/235 (51%), Gaps = 19/235 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG+ D QLG G++ + P+++ + V +ACG AH + LT+ G+
Sbjct: 114 QVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTA-----TGQ 168
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG + GQLG P+ V+ G I ++AG +H+ ++ SG LF G
Sbjct: 169 IYTWGSNNHGQLGLANKTPQNEPQWVSCISG--LPIVRVAAGADHNLVLTISGALFAWGC 226
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+FGQLG GD + +P V + N+ + +ACG HSL L +D V+ FG+G GQ
Sbjct: 227 NSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRD---GGVFTFGAGMYGQ 283
Query: 213 LG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN 264
LG S + + LP+ L + I+ S A + + G +Y +G G N
Sbjct: 284 LGHNTSNNEL----LPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGN 334
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 28/271 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G T GQLG G + + + P ++ SF N V IACG++H+L + KD +V G+
Sbjct: 15 GSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKD---GRVLSCGNN 71
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-------- 260
GQLG K R P + L + ++ S+ S L+ G ++TWG
Sbjct: 72 DYGQLGHEKPCKR----PALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLG 127
Query: 261 RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
RG ++ + P+ + + Q A G H + LT G++ G ++HG L +
Sbjct: 128 RGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTP 187
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + VS + G+ ++++AAGA+H+ V+T + A+ WG GQLG+G+ D+
Sbjct: 188 QNEP-----QWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGA 242
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P +V +N+ + CG + A++R
Sbjct: 243 PTLVK---TLRNQGI-CALACGDDHSLALTR 269
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG+ GQLG + PQ ++ S + +A G H L LT I G +F
Sbjct: 168 QIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT-----ISGALF 222
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G+ D P V I ++ G +HS ++ G +FT G G
Sbjct: 223 AWGCNSFGQLGVGDDQDRGAPTLVKTLRNQ--GICALACGDDHSLALTRDGGVFTFGAGM 280
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGH + P KV + +V QIACG +HS+ + +VY FG G GQLG
Sbjct: 281 YGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPS--SGRVYVFGLGGNGQLG 338
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
L + V +GS GQLG+ +V+LP+ ++E+V I+ + + +G +
Sbjct: 7 LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVL 66
Query: 258 TWGRGFNSTSDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ G P P+ + + QA+ G H VLT G+V G + L
Sbjct: 67 SCGNNDYGQLGHEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQL 126
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ S++ + V L KV+Q+A G+ H+ +T I TWG HGQLGL
Sbjct: 127 GRGQVDSASTSIP---RMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLA 183
Query: 372 NTCDQIHPKVVN 383
N Q P+ V+
Sbjct: 184 NKTPQNEPQWVS 195
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 156/352 (44%), Gaps = 37/352 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G + + P + LS + ++CG + +AL + G V+
Sbjct: 296 VWAWGDNESGQLGDGTTNSKYIPS--QVQGLSGIVSISCGFYYSMALKND-----GTVWV 348
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +SGQLG G D PV+ DG + I+ G NHS + + G ++T G F
Sbjct: 349 WGDNTSGQLGDGTTTDRNTAVPVSGLDG----VIAIACGVNHSMALRNDGTVWTWGFNAF 404
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S ++ V +S + I CG HS+ L D V+ +G + GQLG
Sbjct: 405 GQLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALKDD---GTVWAWGDNQYGQLG- 458
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNSTS 267
S + P L I+ I S AL +G ++ WG +GF T+
Sbjct: 459 -NGTFISNTTPSQVSNLSGIK--SIFCGYSTSFALKPDGTVWAWGNNEYGELGKGF--TT 513
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V P + ++G +H L L DG V G + +G L D + P+
Sbjct: 514 RVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPV---- 569
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+VS + G+ I +AG HS + + + WG GQLG G D+ P
Sbjct: 570 -QVSGISGITAI--SAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTP 618
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 165/360 (45%), Gaps = 38/360 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+ G GQLG D SP + + L+ VS ++ G + +AL S G V++
Sbjct: 196 VWACGENDYGQLGNNNTIDINSP--IPVEGLNKVSSISAGKYYSMALKSD-----GTVWT 248
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G L P V G I IS+G +HS + D G ++ GD
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLSG----IIAISSGNSHSLALKDDGTVWAWGDNES 304
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S P +V + I+CG +S+ L D V+ +G GQLG
Sbjct: 305 GQLGDGTTNSKYIPSQVQGL--SGIVSISCGFYYSMALKND---GTVWVWGDNTSGQLGD 359
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
R+ ++P GL ++ I+ + S AL +G ++TW GFN+ + +
Sbjct: 360 GTTTDRNTAVP--VSGLDG--VIAIACGVNHSMALRNDGTVWTW--GFNAFGQLGDGTKV 413
Query: 276 PSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ + + L G +H + L DG V G + +G L + +S+T P
Sbjct: 414 SKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP----- 468
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 386
+VSNL G+K I G S + + + WG E+G+LG G T I+P + +N+GD
Sbjct: 469 SQVSNLSGIK--SIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLNIGD 526
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 148/310 (47%), Gaps = 31/310 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG T GQLG G D + + +S L V +ACG H +AL + G V++
Sbjct: 346 VWVWGDNTSGQLGDGTTTDRNTA--VPVSGLDGVIAIACGVNHSMALRND-----GTVWT 398
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G V P++ DG I I+ G +HS + D G ++ GD +
Sbjct: 399 WGFNAFGQLGDGTKVSKNTAVPISGLDG----IIAITCGTSHSMALKDDGTVWAWGDNQY 454
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G + S+++P +VS+ + I CG S L D V+ +G+ + G+LG
Sbjct: 455 GQLGNGTFISNTTPSQVSNL--SGIKSIFCGYSTSFALKPD---GTVWAWGNNEYGELG- 508
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSD-VNCPQ 273
K V P T+ + DI+ + I ++ AL +G ++ WG + D +
Sbjct: 509 -KGFTTRVIYPTETLNIGDIKAISIGSS--HCLALKNDGTVWAWGDNRYGQLGDGTTTIK 565
Query: 274 SLPSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
SLP +S + + G +H L L DG V G ++ G L D + P+ +
Sbjct: 566 SLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPV-----Q 620
Query: 330 VSNLDGVKVI 339
VS L G+ VI
Sbjct: 621 VSELSGITVI 630
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 147/339 (43%), Gaps = 37/339 (10%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G +H LAL S G V++ G GQLG+ +D P PV + ++ ISAG
Sbjct: 183 GESHTLALESD-----GTVWACGENDYGQLGNNNTIDINSPIPVEGLN----KVSSISAG 233
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
+S + G ++T G+ +GQLG G + SPV+V + + I+ G HSL L
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNL--SGIIAISSGNSHSLALK 291
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
D V+ +G + GQLG S +P GL IV IS S AL +G
Sbjct: 292 DD---GTVWAWGDNESGQLG--DGTTNSKYIPSQVQGLSG--IVSISCGFYYSMALKNDG 344
Query: 255 HLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
++ WG G +T+D N + A G NH + L DG V G +
Sbjct: 345 TVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNAF 404
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L D +VS + +S LDG +I I G HS + ++ + WG ++GQL
Sbjct: 405 GQLGDGTKVSKNTAV-----PISGLDG--IIAITCGTSHSMALKDDGTVWAWGDNQYGQL 457
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
G G P + N +FCG ++A+
Sbjct: 458 GNGTFISNTTPS------QVSNLSGIKSIFCGYSTSFAL 490
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 160/386 (41%), Gaps = 80/386 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG G+LG G + P + LN+ + ++S+ G +H LAL + G V+
Sbjct: 496 VWAWGNNEYGELGKGFTTRVIYPTETLNIGDIKAISI---GSSHCLALKND-----GTVW 547
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G P V+ G IT ISAG +HS + G ++ G
Sbjct: 548 AWGDNRYGQLGDGTTTIKSLPVQVSGISG----ITAISAGGSHSLALKSDGTVWAWGQNN 603
Query: 155 FGQLGHGDYRSHSSPVKVS--------------SFVNKN--------------------- 179
GQLG G ++PV+VS SF KN
Sbjct: 604 VGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTM 663
Query: 180 ---------VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+ I CG H+L L D V+ +G GQ G + ++P
Sbjct: 664 PIQISGLSGIIAIECGTYHNLALKND---GTVWAWGKNNFGQFG--DGTTTTTNIPVQVS 718
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA-----A 285
GL ++ I+ G+RS AL ++G ++ WGR S S P ++ + + Q
Sbjct: 719 GLSGVK--AIAVGGNRSIALKSDGTVWQWGRILVSVS----PSTVETWTTARQVDGLSEI 772
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+ ++ + L DG+V G + +G L D T V + VS L+GV +A+
Sbjct: 773 VSISNNVALKNDGKVFTWGANDYGQLGD-----GTTTARVTVAPVSGLEGVA--GVASSD 825
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLG 371
S V+ + I WG GQLG G
Sbjct: 826 TTSMVLMNDGTIRAWGKNNFGQLGNG 851
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 155/394 (39%), Gaps = 84/394 (21%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G +P +S+LS + + CG + AL G V++
Sbjct: 446 VWAWGDNQYGQLGNGTFISNTTPS--QVSNLSGIKSIFCGYSTSFALKPD-----GTVWA 498
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+LG G +YP T G I IS G +H + + G ++ GD +
Sbjct: 499 WGNNEYGELGKGFTTRVIYPTE-TLNIGD---IKAISIGSSHCLALKNDGTVWAWGDNRY 554
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G S PV+VS + I+ G HSL L D V+ +G GQLG
Sbjct: 555 GQLGDGTTTIKSLPVQVSGI--SGITAISAGGSHSLALKSD---GTVWAWGQNNVGQLGD 609
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP- 272
+DR V + +++ I IS RS AL +G ++ WG + N P
Sbjct: 610 GTKEDRNTPVQVSELS------GITVISNCIYRSFALKNDGTVWVWG-----SDSYNLPL 658
Query: 273 --QSLPSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
++P +S G H L L DG V G ++ G D ++ P+
Sbjct: 659 EKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPV--- 715
Query: 327 LEKVSNLDGVKVIQIAA-------------------------------------GAEHSA 349
+VS L GVK I + G
Sbjct: 716 --QVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIV 773
Query: 350 VVTENRA------IMTWGWGEHGQLGLGNTCDQI 377
++ N A + TWG ++GQLG G T ++
Sbjct: 774 SISNNVALKNDGKVFTWGANDYGQLGDGTTTARV 807
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
I +S G +H+ + G ++ CG+ +GQLG+ + +SP+ V NK V I+ G
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL-NK-VSSISAGK 234
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
+S+ L D V+ +G GQL G + R+ V + ++ I+ IS+
Sbjct: 235 YYSMALKSD---GTVWTWGENDYGQLGDGTTATRLSPVQVQNLS------GIIAISSGNS 285
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
S AL +G ++ WG G +T+ P + + G+ + + L DG
Sbjct: 286 HSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGT 345
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V + G + G L D ++ R +V VS LDG VI IA G HS + + + T
Sbjct: 346 VWVWGDNTSGQLGDG--TTTDRNTAVP---VSGLDG--VIAIACGVNHSMALRNDGTVWT 398
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
WG+ GQLG G + N D + + CG+ + A+
Sbjct: 399 WGFNAFGQLGDGTKVSK------NTAVPISGLDGIIAITCGTSHSMAL 440
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 131/329 (39%), Gaps = 69/329 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G + P + +S +S ++ ++ GG+H LAL S G V++
Sbjct: 546 VWAWGDNRYGQLGDGTTTIKSLP--VQVSGISGITAISAGGSHSLALKSD-----GTVWA 598
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDG-------------------------------- 123
WG+ + GQLG G D P V+ G
Sbjct: 599 WGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPL 658
Query: 124 HRYT----------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+ T I I G H+ + + G ++ G FGQ G G + + PV+VS
Sbjct: 659 EKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVS 718
Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
V IA G S+ L D V+ +G R + VS + + + + GL
Sbjct: 719 GL--SGVKAIAVGGNRSIALKSD---GTVWQWG---RILVSVSPSTVETWTTARQVDGLS 770
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLS-FSQAALG 287
EIV IS N AL +G ++TWG + T+ + S L + A
Sbjct: 771 --EIVSISNN----VALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASS 824
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+VL DG + G ++ G L + ER
Sbjct: 825 DTTSMVLMNDGTIRAWGKNNFGQLGNGER 853
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + QIACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ R S PQ+ L I ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GFELKRQSS-PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDTD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ +++ IR +P+ L DI+IV I+ S ALS +++WG+
Sbjct: 114 GQLGLPGTEEYIR---VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
GF + PQ + S L F+Q A G H VLT G + G + G L +
Sbjct: 171 LGFELKRQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RFVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
T + + P+++ S + Q A G+ H L L+ EV G + HG L + +R
Sbjct: 118 LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKR 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
SS + + +L G+ Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QSSP-------QLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 FVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G L + SPQL+ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SL+ + + +ACG H LAL+ G
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E+ P+ + G + T ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPF--TQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 189/407 (46%), Gaps = 54/407 (13%)
Query: 36 VWSWG---------AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
V+ WG G+D + + D L P+ L + V + CG H +T
Sbjct: 114 VYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTR-- 171
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G VF+WG S G+LGHG D+++P+ V + ++ G H+ V+ +G
Sbjct: 172 ---NGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA--CNVDFVACGEFHTCAVTTTGE 226
Query: 147 LFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVY 203
L+T GDGT G LGHG H P ++S ++ V ++CG H+ ++ +G Q++
Sbjct: 227 LYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITS--MG-QLF 283
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-----------A 252
FG G G LG + S+S P+ L ++ + ++ +AA+ +
Sbjct: 284 TFGDGSFGVLG--HGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 341
Query: 253 EGHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
G L+TWG G S C SL F + A G + + LT G+VL +
Sbjct: 342 AGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID-YDFYRVACGHSLTVCLTTSGKVLSM 400
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S +G L +P S R + ++++ G V+Q+A G+ H AV+T + TWG G
Sbjct: 401 GNSVYGQLGNPN--SDGRLPCLVEDRIA---GEHVLQVACGSYHVAVLTGRSEVFTWGKG 455
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+G+LG G+ D+ P V + ++R + + CG+ FT AI H
Sbjct: 456 ANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 498
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P + +ACG + + LT+ GKV
Sbjct: 344 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 398
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G GQLG+ D P V + + ++ G H ++ +FT G G
Sbjct: 399 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 456
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G+LGHGD P +V + ++ V IACG + + CL V G
Sbjct: 457 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 503
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 161/357 (45%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E+ P+ V + CG H + L G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G +H+ ++D G +F+ G G+ G
Sbjct: 59 GCNDLGQLGHEKPRKK--PEHVVALDAQ--IIVAVSGGESHTLALNDKGQIFSWGLGSDG 114
Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG ++ P + + + Q+ACG RHS L K G QV+ +G + GQLG+
Sbjct: 115 QLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSK---GGQVFSWGQNQFGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
S+S PQ+ L I +SA G S A++ G ++ WGR G N T+D
Sbjct: 172 GMHG-SSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S + G +H LT +G V G +G L P
Sbjct: 231 WFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIM-TWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QI+ G +H+ T + M ++G G +GQLG +TC++ P V
Sbjct: 286 RKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVK 342
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G +S PQ++ + L+ GGAH A+T + G V
Sbjct: 157 QVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D +P + R + ++S G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDTNDRWFPALLKSLRSQR--VIYVSCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QI+CG +H+L ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPS--SGKMYSFGLGGNGQL 327
Query: 214 GVSKDRIRSVSLP 226
G R P
Sbjct: 328 GTRSTCNRKSPAP 340
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 19/235 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG G+DGQLG + + P+ + S ++ +ACG H AL+ GG+V
Sbjct: 104 QIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSK-----GGQV 158
Query: 94 FSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
FSWG+ GQLG HG + P+ + G + +SAG HS ++ SG +F
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIST--PQIIQSLQGIPF--AQLSAGGAHSFAITLSGAVFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ V ++CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWGRGFN 264
GQLG + P+ L + IS + A + + G +Y++G G N
Sbjct: 272 GQLG--HNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 167/363 (46%), Gaps = 33/363 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG +G LG G + SP + + L+ ++ ++ G AH +AL S G V++
Sbjct: 56 VWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGITAISAGWAHFVALKSD-----GTVWT 108
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G SG+LG G P P+ G IT ISAGWNH+ + G L++ G +
Sbjct: 109 WGVGYSGELGDGTNSLRTTPAPINGLTG----ITAISAGWNHTLALKADGTLWSWGQNQY 164
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G+ + + P++V + + I+ G HSLV+ D V+ +G GQLG
Sbjct: 165 GQLGTGNTTNSNIPLQVPGQI--GITSISSGGGHSLVIKND---GTVWSWGCNNFGQLGN 219
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
+ P GL+ I+ +SA S AL ++G ++ WG F + D
Sbjct: 220 GTNSNNPT--PHQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDS 275
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P GW + DG + G + +G L + + T P+ +
Sbjct: 276 YIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPM-----Q 330
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
VS+L G+ I GA ++ + + I +G +GQLG G T P++V++GD +
Sbjct: 331 VSSLSGITAID--TGATYTVALKTDGNIFAFGENTYGQLGNGTTTGSTTPELVSIGDTYV 388
Query: 390 NRD 392
D
Sbjct: 389 ATD 391
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 26/298 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+SWG +G LG G ++ P V +G IT ISAGW H + G ++T
Sbjct: 54 GTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNG----ITAISAGWAHFVALKSDGTVWTW 109
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G G+LG G ++P ++ + I+ G H+L L D ++ +G +
Sbjct: 110 GVGYSGELGDGTNSLRTTPAPINGLT--GITAISAGWNHTLALKAD---GTLWSWGQNQY 164
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
GQLG ++ L QV I I IS+ G S + +G +++WG G
Sbjct: 165 GQLGTGNTTNSNIPL-QVP---GQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNG 220
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ S+ P + + G H L DG V G + G L++ ++ S P+
Sbjct: 221 TNSNNPTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPV- 279
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ + L+G +I I AG E S+ + + WG ++GQLG G+ D P V
Sbjct: 280 ----QANGLNG--IIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQV 331
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+SAG + + + G +++ G G LG G + +SPV+V + I+ G H
Sbjct: 40 VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL--NGITAISAGWAHF 97
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ L D V+ +G G G+LG + +R+ P GL I ISA + + AL
Sbjct: 98 VALKSD---GTVWTWGVGYSGELGDGTNSLRTTPAP--INGLTG--ITAISAGWNHTLAL 150
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
A+G L++WG+ G +T++ N P +P + + + G H LV+ DG V G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG 210
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
++ G L + ++ P ++S L+G +I ++AG HS + + + WG
Sbjct: 211 CNNFGQLGNGTNSNNPTP-----HQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNF 263
Query: 365 HGQLGLGNTCDQIHPKVVN 383
G+L GN D P N
Sbjct: 264 RGELANGNKIDSYIPVQAN 282
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 238 VGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHV 291
+ +SA + AL +G +++WG N +TS+ N P + + + GW H
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ L DG V G + G L D T P ++ L G+ I+AG H+ +
Sbjct: 98 VALKSDGTVWTWGVGYSGELGDGTNSLRTTP-----APINGLTGITA--ISAGWNHTLAL 150
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + +WG ++GQLG GNT + P
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIP 178
>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1054
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 182/398 (45%), Gaps = 43/398 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+ A +DG + D L P+ L + V+ + CG HV ALT+ G+V
Sbjct: 223 EVWTDAAPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHV-ALTTRQ----GEV 277
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG G+LGHG D PK V + IS G H+ +S SG LF GDG
Sbjct: 278 FTWGEELGGRLGHGTDTDISRPKLVESLSV--TIVDFISCGEFHTCAISASGDLFNWGDG 335
Query: 154 TF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
++ G LG+ SH P +VS V +ACG HS ++ ++Y FG GK
Sbjct: 336 SYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHSALITS---TGRLYTFGDGKF 392
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS----------AEGHLYTWG 260
G LG S + P+ L+ V ++ SAA+ LYTWG
Sbjct: 393 GALGHGNRE--SAAYPKEVEALNGFRTVKVACGVWHSAAIVEASVQTGMNVVSKKLYTWG 450
Query: 261 RGFNSTSDVNCPQS--LPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G + ++ +P+ L +F Q G N + L G V +G S +G L
Sbjct: 451 DGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQLG 510
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+P+ S + + +K++N V +I+ GA H AV+T + TWG G +G+LG G+
Sbjct: 511 NPK--SDGKHPCLVKDKLAN---ELVEEISCGAAHVAVLTSRSEVYTWGLGANGRLGHGD 565
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
D+ P +V + ++R + + CGS FT I H
Sbjct: 566 LNDKKTPTIV---EALKDRHVK-SISCGSNFTTCICIH 599
>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1080
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 185/403 (45%), Gaps = 50/403 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+VW+ G +DG LG+ D L P+ L + V+ + G +H+ +T G+
Sbjct: 230 EVWAEGNSSDG-LGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTR-----QGE 283
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG S G+LGHG D Y KP +++ ++ G H+ VS SG L+T GD
Sbjct: 284 IFTWGEDSGGRLGHG--FDKDYGKPRLVDSLAITSVSFVACGEYHTCAVSISGDLYTWGD 341
Query: 153 GTF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
GT G LGHG SHS P +V+ V IACG H+ ++ + +++ FG G
Sbjct: 342 GTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSN---GKLFTFGDGT 398
Query: 210 RGQLGVSKDRIRSVSLPQ------------VTIGL-HDIEIVGISANGDRSAALSAEGHL 256
G LG DR SV+ P+ V G+ H I+ ++ S+ S+ L
Sbjct: 399 LGVLG-HGDR-ESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKL 456
Query: 257 YTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+TWG G + C +L + +F Q A G + + LT G V +G
Sbjct: 457 FTWGDGDQYRLGHANKETYLQPTCVAAL-ADYNFLQVACGHSLTVALTASGHVFTMGSKA 515
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+G L +P T V + L G V +I+ G H AV+T + TWG G +G+
Sbjct: 516 YGQLGNP-----TSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGR 570
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
LG G+ DQ P +V E ++ + CG+ FT I H
Sbjct: 571 LGHGDIEDQKTPILVEALKERHVKN----IACGANFTTCICIH 609
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + QIACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ R S PQ+ L I ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GFELKRQSS-PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDTD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ +++ IR +P+ L DI+IV I+ S ALS +++WG+
Sbjct: 114 GQLGLPGTEEYIR---VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
GF + PQ + S L F+Q A G H VLT G + G + G L +
Sbjct: 171 LGFELKRQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RFVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
T + + P+++ S + Q A G+ H L L+ EV G + HG L + +R
Sbjct: 118 LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKR 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
SS + + +L G+ Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QSSP-------QLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 FVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G L + SPQL+ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SL+ + + +ACG H LAL+ G
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E+ P+ + G + T ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPF--TQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 163/350 (46%), Gaps = 33/350 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA +GQLG + +P + +S L+ V +A G H +AL S G V++
Sbjct: 164 VWTWGANWNGQLGDESTTNRSTP--VQVSGLTDVIAIAGGAYHTIALKSD-----GTVWA 216
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G D P V+ + I+ G+ H+ + G ++ GD
Sbjct: 217 WGNNEGGQLGDGSTTDRSTPVQVSGLT----DVIAIAGGYAHTIALKSDGTVWAWGDNEG 272
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G + S PVKV +V IA G H++ L D V+ +G + GQLG
Sbjct: 273 GRLGDGSTTNRSIPVKVGGL--SDVIAIAGGNAHTIALKSD---GTVWAWGDNEGGQLGD 327
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
RS P GL D+ + I+ + L ++G ++TWG G ST++
Sbjct: 328 GSTTNRST--PVKVSGLADV--IAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNR 383
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P + A G H + + DG + G + +G L D ++S+ P+ +
Sbjct: 384 STPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV-----Q 438
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V+ L VI IA G H+ + + A+ TWG+ +GQLG G+ ++ P
Sbjct: 439 VNGL--TDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTP 486
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 160/351 (45%), Gaps = 33/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+ GA +GQLG G + +P + +S L+ V +A G H +AL S ++V +
Sbjct: 1059 TVWACGANWNGQLGDGTTINRSTP--VQVSGLTDVIAIAGGDYHTIALKSDNTV-----W 1111
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G + + P PVT+ I I+ G+ H+ + G ++ G
Sbjct: 1112 AWGSNSYGQLGDGTITNRSIPTPVTYLT----NIIAIAGGYVHTIALKSDGTVWAWGYNG 1167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + S+PV+VS +V IA H++ L D V+ +G GQLG
Sbjct: 1168 YGQLGDGSTTNRSTPVQVSGL--TDVIAIAGEYVHTVALKSD---GTVWAWGYNGYGQLG 1222
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
RS P GL D+ + I+ + AL ++G ++TWG G +T +
Sbjct: 1223 DGSTTNRST--PVQVSGLTDV--IAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTIN 1278
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + A G H + L D V G + +G L D ++ P+
Sbjct: 1279 RLTPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPV----- 1333
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+VS L I IA G H+ + + + WG +GQLG +T + + P
Sbjct: 1334 QVSGL--TDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLTP 1382
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 156/353 (44%), Gaps = 37/353 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW++GA + QLG G D +P + +S L+ +A G H +AL S G V+
Sbjct: 611 TVWAYGANWNSQLGDGSTTDSSTP--VQVSGLTDAIAIAGGVYHTIALKSD-----GTVW 663
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G ++ P V + I+ G H+ + G ++T G
Sbjct: 664 TWGWNNSGQLGDGTTINRSTPVQVIGLT----DVIAIAGGDYHTIALKSDGTVWTWGFNY 719
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + S+PV+V ++ IA G HS+ L D V+ +G GQLG
Sbjct: 720 YGQLGGGATTNRSTPVQVKGL--ADIIAIAGGYVHSIALKSD---GTVWAWGYNGYGQLG 774
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ D + V + +T +I+ I+ + AL ++G ++ WG G +T
Sbjct: 775 DGSTTDHLTPVQVSGLT------DIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTT 828
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
++ + P + H + L DG V G + +G L D + P+ V
Sbjct: 829 TNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQV- 887
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ VI IA G H+ + + A+ WG+ + QLG +T + P
Sbjct: 888 ------IGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTP 934
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 143/320 (44%), Gaps = 31/320 (9%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
S ++ G H L L P G V++WG +GQLG + P V+ +
Sbjct: 146 SQISAGAYHTLTL-KPD----GAVWTWGANWNGQLGDESTTNRSTPVQVSGLT----DVI 196
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
I+ G H+ + G ++ G+ GQLG G S+PV+VS +V IA G H
Sbjct: 197 AIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGL--TDVIAIAGGYAH 254
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
++ L D V+ +G + G+LG RS+ P GL D+ + I+ + A
Sbjct: 255 TIALKSD---GTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDV--IAIAGGNAHTIA 307
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L ++G ++ WG G ST++ + P + A G++H +VL DG V
Sbjct: 308 LKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDGTVWTW 367
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + G L D + + P+ +VS L VI IA G H+ V + + WG+
Sbjct: 368 GHNEGGQLGDGSTTNRSTPV-----QVSGL--ADVIAIAGGVYHTIAVKSDGTMWAWGYN 420
Query: 364 EHGQLGLGNTCDQIHPKVVN 383
+GQLG G T + P VN
Sbjct: 421 WYGQLGDGTTINSSTPVQVN 440
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 123/267 (46%), Gaps = 23/267 (8%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
+ ISAG H+ + G ++ CG GQLG G + S+PV+VS +V IA G
Sbjct: 1042 SQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGL--TDVIAIAGGDY 1099
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H++ L D N V+ +GS GQLG RS+ P + I+ I+ +
Sbjct: 1100 HTIALKSD---NTVWAWGSNSYGQLGDGTITNRSIPTPVTYL----TNIIAIAGGYVHTI 1152
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL ++G ++ WG G ST++ + P + A + H + L DG V
Sbjct: 1153 ALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSDGTVWA 1212
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + +G L D + + P+ +VS L VI IA G H+ + + + TWGW
Sbjct: 1213 WGYNGYGQLGDGSTTNRSTPV-----QVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGW 1265
Query: 363 GEHGQLGLGNTCDQIHP-KVVNLGDEF 388
GQLG G T +++ P +V L D
Sbjct: 1266 NNSGQLGDGTTINRLTPVQVSGLTDAI 1292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 26/295 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G + +P + + L+ V +A G H +AL S G V+
Sbjct: 661 TVWTWGWNNSGQLGDGTTINRSTP--VQVIGLTDVIAIAGGDYHTIALKSD-----GTVW 713
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G + P V I I+ G+ HS + G ++ G
Sbjct: 714 TWGFNYYGQLGGGATTNRSTPVQVKGLA----DIIAIAGGYVHSIALKSDGTVWAWGYNG 769
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G H +PV+VS ++ IA G H++ L D V+ +G + GQLG
Sbjct: 770 YGQLGDGSTTDHLTPVQVSGL--TDIIAIAGGYIHTIALKSD---GTVWAWGHNEGGQLG 824
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ S P GL D ++ ++A + AL ++G ++TWGR G ST++
Sbjct: 825 --DGTTTNSSTPVQVSGLTD--VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTE 880
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ P + A G+ H + L DG V G + + L + +S+ P+
Sbjct: 881 RSLPVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPV 935
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 141/326 (43%), Gaps = 32/326 (9%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
S ++ G H L L P G V++ G +GQLG G ++ P V+ +
Sbjct: 1042 SQISAGAYHTLTL-KPD----GTVWACGANWNGQLGDGTTINRSTPVQVSGLT----DVI 1092
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
I+ G H+ + ++ G ++GQLG G + S P V+ N+ IA G H
Sbjct: 1093 AIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYL--TNIIAIAGGYVH 1150
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
++ L D V+ +G GQLG RS P GL D+ + I+ + A
Sbjct: 1151 TIALKSD---GTVWAWGYNGYGQLGDGSTTNRST--PVQVSGLTDV--IAIAGEYVHTVA 1203
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L ++G ++ WG G ST++ + P + A G+ H + L DG V
Sbjct: 1204 LKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTW 1263
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G ++ G L D ++ P+ +VS L I IA G H+ + + + WG
Sbjct: 1264 GWNNSGQLGDGTTINRLTPV-----QVSGL--TDAIAIAGGDYHTIALKSDNTVWAWGSN 1316
Query: 364 EHGQLGLGNTCDQIHP-KVVNLGDEF 388
+GQLG G T +++ P +V L D
Sbjct: 1317 SYGQLGDGTTINRLTPVQVSGLTDAI 1342
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 143/324 (44%), Gaps = 32/324 (9%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
+ ++ G H L L P G V+++G + QLG G D+ P V+
Sbjct: 594 TQISAGAYHTLTL-KPD----GTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT----DAI 644
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
I+ G H+ + G ++T G GQLG G + S+PV+V +V IA G H
Sbjct: 645 AIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGL--TDVIAIAGGDYH 702
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
++ L D V+ +G GQLG RS P GL DI + I+ S A
Sbjct: 703 TIALKSD---GTVWTWGFNYYGQLGGGATTNRST--PVQVKGLADI--IAIAGGYVHSIA 755
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L ++G ++ WG G ST+D P + A G+ H + L DG V
Sbjct: 756 LKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAW 815
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + G L D +S+ P+ +VS L VI + A H+ + + + TWG
Sbjct: 816 GHNEGGQLGDGTTTNSSTPV-----QVSGL--TDVIAVTARLYHTIALKSDGTVWTWGRN 868
Query: 364 EHGQLGLGNTCDQIHP-KVVNLGD 386
+GQLG G+T ++ P +V+ L D
Sbjct: 869 IYGQLGDGSTTERSLPVQVIGLTD 892
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 161/389 (41%), Gaps = 63/389 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
VW+WG GQLG G + + +P +LS + SV+ + G A ++L+S +++ G V
Sbjct: 464 VWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSS--ALLNGWV 521
Query: 94 ----------FSWGRGS-------------SGQLGHGEMVDALYPKPVTF---------- 120
F +G + +G G + L P +
Sbjct: 522 NGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGG 581
Query: 121 -FDGHRYTI---THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
+ G T T ISAG H+ + G ++ G QLG G S+PV+VS
Sbjct: 582 IYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLT 641
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
+ IA G+ H++ L D V+ +G GQLG RS P IGL D+
Sbjct: 642 DA--IAIAGGVYHTIALKSD---GTVWTWGWNNSGQLGDGTTINRST--PVQVIGLTDV- 693
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNH 290
+ I+ + AL ++G ++TWG + +T++ + P + A G+ H
Sbjct: 694 -IAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVH 752
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ L DG V G + +G L D P+ +VS L +I IA G H+
Sbjct: 753 SIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPV-----QVSGL--TDIIAIAGGYIHTIA 805
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + + WG E GQLG G T + P
Sbjct: 806 LKSDGTVWAWGHNEGGQLGDGTTTNSSTP 834
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 146/359 (40%), Gaps = 36/359 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G + +P + +S L+ V +A G H +A+ S G ++
Sbjct: 363 TVWTWGHNEGGQLGDGSTTNRSTP--VQVSGLADVIAIAGGVYHTIAVKSD-----GTMW 415
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G +++ P V + I+ G+ H+ + G ++T G
Sbjct: 416 AWGYNWYGQLGDGTTINSSTPVQVNGLT----DVIAIAGGYYHTIAMKSDGAVWTWGFNY 471
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG G + S+P + S K+V + G + L L V G G
Sbjct: 472 YGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATTAW 531
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC- 271
+ G++ IS + + G L W + + N
Sbjct: 532 FDYGT-----------STGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIG 580
Query: 272 ---PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
S + + +Q + G H L L DG V G + + L D S+ P+
Sbjct: 581 GIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPV----- 635
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 386
+VS L I IA G H+ + + + TWGW GQLG G T ++ P +V+ L D
Sbjct: 636 QVSGL--TDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTD 692
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 143/354 (40%), Gaps = 35/354 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G + +P + +S L+ V + H +AL S G V+
Sbjct: 811 TVWAWGHNEGGQLGDGTTTNSSTP--VQVSGLTDVIAVTARLYHTIALKSD-----GTVW 863
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR GQLG G + P V + I+ G+ H+ + G ++ G
Sbjct: 864 TWGRNIYGQLGDGSTTERSLPVQVIGLT----DVIAIAGGYYHTIALKSDGAVWAWGYNG 919
Query: 155 FGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
QLG+ ++ S+PV+ + +N + V L L N G+ G R
Sbjct: 920 NNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLN---GWVDGNRAAT 976
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGRGFNSTSDVNCP 272
D S G++ + G SA +SA G L W + + N
Sbjct: 977 TAWFDYGTSS-------GVY-FDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSR 1028
Query: 273 Q-SLPSSLSF---SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
S S F SQ + G H L L DG V G + +G L D ++ + P+
Sbjct: 1029 GISYGSETIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPV----- 1083
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+VS L VI IA G H+ + + + WG +GQLG G ++ P V
Sbjct: 1084 QVSGL--TDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPV 1135
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 189/407 (46%), Gaps = 54/407 (13%)
Query: 36 VWSWG---------AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
V+ WG G+D + + D L P+ L + V + CG H +T
Sbjct: 37 VYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTR-- 94
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G VF+WG S G+LGHG D+++P+ V + ++ G H+ V+ +G
Sbjct: 95 ---NGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA--CNVDFVACGEFHTCAVTTTGE 149
Query: 147 LFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVY 203
L+T GDGT G LGHG H P ++S ++ V ++CG H+ ++ +G Q++
Sbjct: 150 LYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITS--MG-QLF 206
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-----------A 252
FG G G LG + S+S P+ L ++ + ++ +AA+ +
Sbjct: 207 TFGDGSFGVLG--HGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 264
Query: 253 EGHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
G L+TWG G S C SL F + A G + + LT G+VL +
Sbjct: 265 AGKLFTWGDGDKHRLGHGDKESRLKPTCVASL-IDYDFYRVACGHSLTVCLTTSGKVLSM 323
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S +G L +P S R + ++++ G V+Q+A G+ H AV+T + TWG G
Sbjct: 324 GNSVYGQLGNPN--SDGRLPCLVEDRIA---GEHVLQVACGSYHVAVLTGRSEVFTWGKG 378
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+G+LG G+ D+ P V + ++R + + CG+ FT AI H
Sbjct: 379 ANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 421
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P + +ACG + + LT+ GKV
Sbjct: 267 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 321
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G GQLG+ D P V + + ++ G H ++ +FT G G
Sbjct: 322 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 379
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G+LGHGD P +V + ++ V IACG + + CL V G
Sbjct: 380 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 426
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 157/353 (44%), Gaps = 30/353 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G G
Sbjct: 59 GCNDLGQLGHEKSRKR--PEQVGALDAQ--NIVTVSCGEAHTLALNDKGQVYAWGFAVDG 114
Query: 157 QLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG ++ P + S + + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSK---GSEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GYEYKKQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
KV L G V QIA G +H SA V I ++G G +GQLG+G T ++ P
Sbjct: 286 RKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSP 338
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ +FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKRPEQVGALDAQNIVTVSCGEAHTLALNDK---GQVYAWGFAVD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+S +P+ L DI+IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLSGTE-EYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ + PQ + S L F+Q A G H VLT G V G + G L +
Sbjct: 173 YEYKKQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + +L K++ I+ G +H+A +T+ + T+G G +GQLG +T +I+P+
Sbjct: 232 VP-----NLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPR 286
Query: 381 VV 382
V
Sbjct: 287 KV 288
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 26/271 (9%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P + S FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
GQLG K R R P+ L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKSRKR----PEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ T + P+++ S + Q A G+ H L L+ EV G + +G L +
Sbjct: 118 LSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLG----LGY 173
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + + +L G+ QIAAG HS V+T + A+ WG + GQLGL + D+ P
Sbjct: 174 EYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVP 233
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
NL +++ + + CG T A+++
Sbjct: 234 ---NLLKSLRSQKI-VYISCGEDHTAALTKE 260
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G + SPQ++ + +A GGAH LT + G V
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLT-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +IS G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYISCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPST--GRIYSFGLGGNGQL 327
Query: 214 GVSKDRIRSVSLP 226
G+ R P
Sbjct: 328 GMGTTSNRKSPFP 340
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
+V++WG DGQLG +E + N+ SLS + ++ ACG H LAL+ G +
Sbjct: 104 QVYAWGFAVDGQLGLSGT-EEYTRVPRNIKSLSDIQIVQVACGYFHSLALSK-----GSE 157
Query: 93 VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG+ GQLG G E P+ + G + I+AG HS ++ SG +F G
Sbjct: 158 VFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPF--AQIAAGGAHSFVLTLSGAVFGWG 215
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FGQLG D P + S ++ + I+CG H+ L K+ V+ FG+G G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE---GGVFTFGAGGYG 272
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG ++ +V + +I SA + + G +Y++G G N +
Sbjct: 273 QLG-HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGT 331
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGE 299
+ S L +N + L DGE
Sbjct: 332 TSNRKSPFPVKGNWLPYNGQIPLNSDGE 359
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 162/349 (46%), Gaps = 36/349 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T+ LG G + E + P +N S V ++CG +H L S G+V
Sbjct: 60 QLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISEASGRV 119
Query: 94 FSWGRGSSGQLGH-------------GEMVDALY-PKPVTFFDGHRYTITHISAGWNHSG 139
++ G G G+LG+ ++ ++ Y P P I+ IS G NHS
Sbjct: 120 YTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCGANHSL 179
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCL 198
+SDSG +F G G +G LG G+ SPVK+ + +K V IA G RHSL +D
Sbjct: 180 ALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNED-- 237
Query: 199 GNQVYGFGSGKRGQLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
QV+ +GS G+LG +++V P L I ++A S + + G++Y
Sbjct: 238 -GQVFAWGSNSNGRLGTGGSYGMKTV--PTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294
Query: 258 TWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
TWG G + SD N P+ + SSL F Q LG + + L+ GEV + G H
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQHE 354
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
++S P ++ + + +++ I A H+ + NR ++
Sbjct: 355 IISLPTKIDAFD------SHICHINSGPYISFAMDVRHNIYLWNNRLLV 397
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 38/269 (14%)
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP-VKVSSFVNKN----- 179
+++ I+ G +H+ + G +F GD +GQLG R S K SF+N+
Sbjct: 488 WSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKF 547
Query: 180 ---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
+ ++ACG HSL D GN + +G G RGQLG IR++ P + L ++
Sbjct: 548 SEPIRRVACGSWHSLCC--DIKGN-CFSWGRGDRGQLGTGA--IRNLYEPAGIVTLKNVI 602
Query: 237 -----------IVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLP 276
IV G++ G L+ WG G S + P+ L
Sbjct: 603 EVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN 662
Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
+ ALG +H L LT GE++ G ++G L S + P+ + + GV
Sbjct: 663 LGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFP----IKGV 718
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+++ IA G+ HS V+ + WG E+
Sbjct: 719 QIVDIAVGSYHSMAVSSLGDLWVWGKAEN 747
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 35/289 (12%)
Query: 123 GHRYTITHISAGWNHSGFVS---DSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNK 178
GH +T ++ NH V+ + G L+ G T LG G + + P+KV+ F
Sbjct: 36 GHSFT--RAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93
Query: 179 NVHQIACGMRHSLVLLKDC--LGNQVYGFGSGKRGQLGVSKDRIR--------------S 222
V Q++CG H+ VL+K +VY G G RG+LG ++
Sbjct: 94 EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWY 153
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSL- 275
+P + + +I IS + S ALS G ++ WG G +DV P +
Sbjct: 154 TPIPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIE 213
Query: 276 --PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
P+ A G H L DG+V G + +G L + + ++ +L
Sbjct: 214 AGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG----TGGSYGMKTVPTQIKSL 269
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +AAG HS + I TWG G G+LG G D P+ +
Sbjct: 270 SQYHITLVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRI 318
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 36/261 (13%)
Query: 36 VWSWGAGTDGQLGT---------GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
+++WG GQLG G ++ + + + +ACG H L
Sbjct: 509 IFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRRVACGSWHSLCCD--- 565
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD-------GHRYT---ITHISAGWN 136
I G FSWGRG GQLG G + + P + G Y+ + I+ G N
Sbjct: 566 --IKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTG-N 622
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVL 193
+SG L+ GDG G+LG GD+ S +P ++ + + ++A G H+L L
Sbjct: 623 KDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN--LGTPIIKVALGSSHTLAL 680
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
++ +G+G G+LG + + S + ++ + ++IV I+ S A+S+
Sbjct: 681 ---TASGELITWGAGYYGRLGTNSTKSHSNPI-KIRFPIKGVQIVDIAVGSYHSMAVSSL 736
Query: 254 GHLYTWGRGFN--STSDVNCP 272
G L+ WG+ N S DV P
Sbjct: 737 GDLWVWGKAENVLSEKDVLTP 757
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 51/326 (15%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---------HGEMVDALYPKPV 118
SV +ACG +H L L V GG +F+WG GQLG G+ ++ +P
Sbjct: 489 SVRQIACGTSHTLLL-----VYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPT 543
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
I ++ G HS G F+ G G GQLG G R+ P + + K
Sbjct: 544 EI--KFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTL--K 599
Query: 179 NVHQIACGMRHSLVLLKDCL--GNQ---------VYGFGSGKRGQLGVSKDRIRS-VSLP 226
NV ++A G +S ++ C+ GN+ ++ +G G G+LG+ ++S ++ P
Sbjct: 600 NVIEVAGGELYSACIVA-CITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAP 658
Query: 227 Q-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSL 279
+ + +G I+ ++ + AL+A G L TWG G+ NST + P + +
Sbjct: 659 RHLNLG---TPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFPI 715
Query: 280 SFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
Q A+G H + ++ G+ L + G +LS+ + ++ P A K+ + G+
Sbjct: 716 KGVQIVDIAVGSYHSMAVSSLGD-LWVWGKAENVLSEKDVLT---PYIFA--KLESPSGI 769
Query: 337 -KVIQIAAGAEHSAVVTENRAIMTWG 361
++ I A + S +T++ + WG
Sbjct: 770 PRIYSIHAFGDVSYAITQSGVLWIWG 795
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 22/296 (7%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSP-----SSVIG 90
+SWG G GQLGTG + + P ++ L ++ V+ A ++A + ++
Sbjct: 571 FSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTGNKDLDTINS 630
Query: 91 GKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G ++ WG G G+LG G+ ++ + P G I ++ G +H+ ++ SG L T
Sbjct: 631 GDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT--PIIKVALGSSHTLALTASGELIT 688
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGS 207
G G +G+LG +SHS+P+K+ F K V IA G HS+ + LG+ +
Sbjct: 689 WGAGYYGRLGTNSTKSHSNPIKI-RFPIKGVQIVDIAVGSYHSMAV--SSLGDL---WVW 742
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
GK + KD + ++ I I A GD S A++ G L+ WG + T
Sbjct: 743 GKAENVLSEKDVLTPYIFAKLESPSGIPRIYSIHAFGDVSYAITQSGVLWIWGPENSETE 802
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH-GMLSDPERVSSTRP 322
++ Q L +S+ ++ G ++VL G+ + +HH +L+ E VS P
Sbjct: 803 NI---QGLETSIKI-KSHTGRAEMIVLPGNAIGVSGSTTHHVCLLASGEVVSWGDP 854
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 25/163 (15%)
Query: 248 AALSAEGHLYTWGRGFNST-------SDVNCPQSLP--SSLSFSQAALGWNHVLVLT--- 295
A L +G LY WG N+ + N P + S+L Q + G++H VL
Sbjct: 53 AKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGI 112
Query: 296 --GDGEVLMLGGSHHGML----------SDPERVSSTRPLSVALEKVSNLD-GVKVIQIA 342
G V +G G L ++ ++ + + N K+ +I+
Sbjct: 113 SEASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRIS 172
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
GA HS ++++ + WG G++G LG G D P + G
Sbjct: 173 CGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAG 215
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 189/407 (46%), Gaps = 54/407 (13%)
Query: 36 VWSWG---------AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
V+ WG G+D + + D L P+ L + V + CG H +T
Sbjct: 37 VYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTR-- 94
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G VF+WG S G+LGHG D+++P+ V + ++ G H+ V+ +G
Sbjct: 95 ---NGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA--CNVDFVACGEFHTCAVTTTGE 149
Query: 147 LFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVY 203
L+T GDGT G LGHG H P ++S ++ V ++CG H+ ++ +G Q++
Sbjct: 150 LYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITS--MG-QLF 206
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-----------A 252
FG G G LG + S+S P+ L ++ + ++ +AA+ +
Sbjct: 207 TFGDGSFGVLG--HGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVS 264
Query: 253 EGHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
G L+TWG G S C SL F + A G + + LT G+VL +
Sbjct: 265 AGKLFTWGDGDKHRLGHGDKESRLKPTCVASL-IDYDFYRVACGHSLTVCLTTSGKVLSM 323
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G S +G L +P S R + ++++ G V+Q+A G+ H AV+T + TWG G
Sbjct: 324 GNSVYGQLGNPN--SDGRLPCLVEDRIA---GEHVLQVACGSYHVAVLTGRSEVFTWGKG 378
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+G+LG G+ D+ P V + ++R + + CG+ FT AI H
Sbjct: 379 ANGRLGHGDIEDRKVPTQV---EALKDRAVR-HIACGANFTAAICLH 421
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P + +ACG + + LT+ GKV
Sbjct: 267 KLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTT-----SGKVL 321
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G GQLG+ D P V + + ++ G H ++ +FT G G
Sbjct: 322 SMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVL-QVACGSYHVAVLTGRSEVFTWGKGA 379
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G+LGHGD P +V + ++ V IACG + + CL V G
Sbjct: 380 NGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI---CLHKWVSG 426
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + QIACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK---GSEVFSWGQNKHGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ R S PQ+ L I ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GFELKRQSS-PQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 FVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDTD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ +++ IR +P+ L DI+IV I+ S ALS +++WG+
Sbjct: 114 GQLGLPGTEEYIR---VPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
GF + PQ + S L F+Q A G H VLT G + G + G L +
Sbjct: 171 LGFELKRQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RFVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
T + + P+++ S + Q A G+ H L L+ EV G + HG L + +R
Sbjct: 118 LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKR 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
SS + + +L G+ Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QSSP-------QLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 FVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G L + SPQL+ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRFVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SL+ + + +ACG H LAL+ G
Sbjct: 104 QVYAWGLDTDGQLGLPGTEEYIRVPR--NIKSLTDIQIVQIACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E+ P+ + G + T ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPF--TQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
Length = 982
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 167/387 (43%), Gaps = 74/387 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG G+LG G D PQL+ + + ++ACG H A+T + G++++
Sbjct: 301 VFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDFHTCAVT-----LSGELYT 355
Query: 96 WGRG--SSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WG S G +GH V PK ++ +G R I+ I+ G H+ VS +G LFT GD
Sbjct: 356 WGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVR--ISSIACGAWHTALVSSAGQLFTFGD 413
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GTFG LGHGD R+ + P +V S + ACG+ H+ +++
Sbjct: 414 GTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVE----------------- 456
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
IVG S SA + G L+TWG G
Sbjct: 457 -----------------------VIVGYS-----SATSCSSGKLFTWGDGDKYRLGHGDK 488
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P + + +F Q A G + + LT G V +G + +G L +P + P
Sbjct: 489 EQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNP-KADGKVPGM 547
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V E V +I GA H A ++ I TWG G +G+LG G+ D+ P +V
Sbjct: 548 VDGELARTF----VEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVE- 602
Query: 385 GDEFQNRDTQLE-VFCGSGFTYAISRH 410
RD Q++ V CGS FT I H
Sbjct: 603 ----ALRDKQVKTVACGSSFTAVICLH 625
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 124/320 (38%), Gaps = 77/320 (24%)
Query: 105 GHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
G G VD+L PK + D ++ I+ G H+ V+ G +F G+ G+LGHG
Sbjct: 261 GAGSRVDSLVPKALQAAVVLD-----VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHG 315
Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
S P V + N +ACG H+ + L ++Y +G+ + V
Sbjct: 316 IDVDVSEPQLVQALAGVNTELVACGDFHTCAVT---LSGELYTWGADAQSGGLVGHSNPV 372
Query: 222 SVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS 280
S +P+ ++ L + I I+ +A +S+ G L+T+
Sbjct: 373 SHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTF--------------------- 411
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
GDG +LG L+ P+ V S L G+K ++
Sbjct: 412 ---------------GDGTFGVLGHGDKRNLAIPKEVES-------------LKGLKTVR 443
Query: 341 IAAGAEHSAVVTE------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
A G H+A V E + + TWG G+ +LG G+ ++ P V ++
Sbjct: 444 AACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY 503
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
R +V CG T A++
Sbjct: 504 NFR----QVACGHSLTVALT 519
>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
Length = 1878
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 162/349 (46%), Gaps = 36/349 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T+ LG G + E + P +N S V ++CG +H L S G+V
Sbjct: 60 QLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISEASGRV 119
Query: 94 FSWGRGSSGQLGH-------------GEMVDALY-PKPVTFFDGHRYTITHISAGWNHSG 139
++ G G G+LG+ ++ ++ Y P P I+ IS G NHS
Sbjct: 120 YTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRISCGANHSL 179
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCL 198
+SDSG +F G G +G LG G+ SPVK+ + +K V IA G RHSL +D
Sbjct: 180 ALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNED-- 237
Query: 199 GNQVYGFGSGKRGQLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
QV+ +GS G+LG +++V P L I ++A S + + G++Y
Sbjct: 238 -GQVFAWGSNSNGRLGTGGSYGMKTV--PTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294
Query: 258 TWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
TWG G + SD N P+ + SSL F Q LG + + L+ GEV + G H
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQHE 354
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
++S P ++ + + +++ I A H+ + NR ++
Sbjct: 355 IISLPTKIDAFD------SHICHINSGPYISFAMDVRHNIYLWNNRLLV 397
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 38/269 (14%)
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP-VKVSSFVNKN----- 179
+++ I+ G +H+ + G +F GD +GQLG R S K SF+N+
Sbjct: 488 WSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKF 547
Query: 180 ---VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
+ ++ACG HSL D GN + +G G RGQLG IR++ P + L ++
Sbjct: 548 SEPIRRVACGSWHSLCC--DIKGN-CFSWGRGDRGQLGTGA--IRNLYEPAGIVTLKNVI 602
Query: 237 -----------IVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLP 276
IV G++ G L+ WG G S + P+ L
Sbjct: 603 EVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN 662
Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
+ ALG +H LVLT GE++ G ++G L S + P+ + + GV
Sbjct: 663 LGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFP----IKGV 718
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+++ IA G+ HS V+ + WG E+
Sbjct: 719 QIVDIAVGSYHSMAVSSLGDLWVWGKAEN 747
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 35/289 (12%)
Query: 123 GHRYTITHISAGWNHSGFVS---DSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNK 178
GH +T ++ NH V+ + G L+ G T LG G + + P+KV+ F
Sbjct: 36 GHSFT--RAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93
Query: 179 NVHQIACGMRHSLVLLKDC--LGNQVYGFGSGKRGQLGVSKDRIR--------------S 222
V Q++CG H+ VL+K +VY G G RG+LG ++
Sbjct: 94 EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWY 153
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSL- 275
+P + + +I IS + S ALS G ++ WG G +DV P +
Sbjct: 154 TPVPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIE 213
Query: 276 --PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
P+ A G H L DG+V G + +G L + + ++ +L
Sbjct: 214 AGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG----TGGSYGMKTVPTQIKSL 269
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +AAG HS + I TWG G G+LG G D P+ +
Sbjct: 270 SQYHITLVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRI 318
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 36/261 (13%)
Query: 36 VWSWGAGTDGQLGT---------GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
+++WG GQLG G ++ + + + +ACG H L
Sbjct: 509 IFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEPIRRVACGSWHSLCCD--- 565
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD-------GHRYT---ITHISAGWN 136
I G FSWGRG GQLG G + + P + G Y+ + I+ G N
Sbjct: 566 --IKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTG-N 622
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVL 193
+SG L+ GDG G+LG GD+ S +P ++ + + ++A G H+LVL
Sbjct: 623 KDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN--LGTPIIKVALGSSHTLVL 680
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
++ +G+G G+LG + + S + ++ + ++IV I+ S A+S+
Sbjct: 681 ---TASGELITWGAGYYGRLGTNSTKSHSNPI-KIRFPIKGVQIVDIAVGSYHSMAVSSL 736
Query: 254 GHLYTWGRGFN--STSDVNCP 272
G L+ WG+ N S DV P
Sbjct: 737 GDLWVWGKAENVLSEKDVLTP 757
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSP-----SSVIG 90
+SWG G GQLGTG + + P ++ L ++ V+ A ++A + ++
Sbjct: 571 FSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSACIVACITTGNKDLDTINS 630
Query: 91 GKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G ++ WG G G+LG G+ ++ + P G I ++ G +H+ ++ SG L T
Sbjct: 631 GDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT--PIIKVALGSSHTLVLTASGELIT 688
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGS 207
G G +G+LG +SHS+P+K+ F K V IA G HS+ + LG+ +
Sbjct: 689 WGAGYYGRLGTNSTKSHSNPIKI-RFPIKGVQIVDIAVGSYHSMAV--SSLGDL---WVW 742
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
GK + KD + ++ I I A GD S A++ G L+ WG + T
Sbjct: 743 GKAENVLSEKDVLTPYIFAKLESPSGVPRIYSIHAFGDVSYAITQSGVLWIWGPENSETE 802
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
++ Q L SS+ TG E+++L G+ G+
Sbjct: 803 NI---QGLESSIKIKSH----------TGRAEMILLPGNAIGV 832
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 148/326 (45%), Gaps = 51/326 (15%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---------HGEMVDALYPKPV 118
SV +ACG +H L L V GG +F+WG GQLG +G+ ++ +P
Sbjct: 489 SVRQIACGTSHTLLL-----VYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPT 543
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
I ++ G HS G F+ G G GQLG G R+ P + + K
Sbjct: 544 EI--KFSEPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTL--K 599
Query: 179 NVHQIACGMRHSLVLLKDCL--GNQ---------VYGFGSGKRGQLGVSKDRIRS-VSLP 226
NV ++A G +S ++ C+ GN+ ++ +G G G+LG+ ++S ++ P
Sbjct: 600 NVIEVAGGELYSACIVA-CITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAP 658
Query: 227 Q-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSL 279
+ + +G I+ ++ + L+A G L TWG G+ NST + P + +
Sbjct: 659 RHLNLG---TPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFPI 715
Query: 280 SFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
Q A+G H + ++ G+ L + G +LS+ + ++ P A K+ + GV
Sbjct: 716 KGVQIVDIAVGSYHSMAVSSLGD-LWVWGKAENVLSEKDVLT---PYIFA--KLESPSGV 769
Query: 337 -KVIQIAAGAEHSAVVTENRAIMTWG 361
++ I A + S +T++ + WG
Sbjct: 770 PRIYSIHAFGDVSYAITQSGVLWIWG 795
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 25/163 (15%)
Query: 248 AALSAEGHLYTWGRGFNST-------SDVNCPQSLP--SSLSFSQAALGWNHVLVLT--- 295
A L +G LY WG N+ + N P + S+L Q + G++H VL
Sbjct: 53 AKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGI 112
Query: 296 --GDGEVLMLGGSHHGML----------SDPERVSSTRPLSVALEKVSNLD-GVKVIQIA 342
G V +G G L ++ ++ + + N K+ +I+
Sbjct: 113 SEASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRIS 172
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
GA HS ++++ + WG G++G LG G D P + G
Sbjct: 173 CGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAG 215
>gi|336088622|ref|NP_001229506.1| secretion regulating guanine nucleotide exchange factor [Apis
mellifera]
Length = 381
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 179/364 (49%), Gaps = 40/364 (10%)
Query: 38 SWGAGTDGQLGTGRLHDE-LSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIGGK 92
SWGA + GQLG G +E + P ++LS S + + G H L L G
Sbjct: 7 SWGANSHGQLGQGFRSEECVLPCEVDLSKCSLEPQKIKKIIGGAGHTLILDDY-----GC 61
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+S G + GQ+G D L + + ++ I I+ GW+ S ++ G LF G
Sbjct: 62 VYSCGWNNKGQVGFSTKEDILLFQKLKGKLKNK-VIVDIACGWDCSAALTIEGTLFVWGS 120
Query: 153 GTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+FGQLG D + P +V +++ + +I+ G+RH++++ +D +V+ G+ +
Sbjct: 121 NSFGQLGKHPNDLQWTHEPFEV--VIDRKIKRISIGLRHTVLITED---YKVFVAGTDNK 175
Query: 211 GQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
GQLG++ + + +V + + L +IE IS + A++ +G+ Y +G
Sbjct: 176 GQLGLNSTKNDKSLNAVYIFTEVLTLSNIE--HISCGQHHTIAVAKDGNFYAFGDNKYGQ 233
Query: 267 SDVNC---PQSL-PSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+N P++L P LS Q L GW+HV+VL + + G + +G L +
Sbjct: 234 LGINTDIFPKTLIPIKLSDFQFKLPFNLYSGWSHVIVLKNN-YIFGWGRNTYGQLGIAQL 292
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
S+ ++ LE + K+ Q++ G+EH+ +TEN I+ WGW EHG G G+T D
Sbjct: 293 EKSSTWKAIQLENIP-----KIYQVSVGSEHNVALTENGKILCWGWNEHGNCGNGHTKDV 347
Query: 377 IHPK 380
P+
Sbjct: 348 KFPE 351
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 21/219 (9%)
Query: 205 FGSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+G+ GQLG S++ + + L +I I + L G +Y+ G
Sbjct: 8 WGANSHGQLGQGFRSEECVLPCEVDLSKCSLEPQKIKKIIGGAGHTLILDDYGCVYSCGW 67
Query: 262 ------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML- 311
GF++ D+ Q L L A GW+ LT +G + + G + G L
Sbjct: 68 NNKGQVGFSTKEDILLFQKLKGKLKNKVIVDIACGWDCSAALTIEGTLFVWGSNSFGQLG 127
Query: 312 SDPERVSST-RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
P + T P V +++ K+ +I+ G H+ ++TE+ + G GQLGL
Sbjct: 128 KHPNDLQWTHEPFEVVIDR-------KIKRISIGLRHTVLITEDYKVFVAGTDNKGQLGL 180
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+T + V + E + CG T A+++
Sbjct: 181 NSTKNDKSLNAVYIFTEVLTLSNIEHISCGQHHTIAVAK 219
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG T GQLG +L + + + L ++ + ++ G H +ALT GK+
Sbjct: 276 IFGWGRNTYGQLGIAQLEKSSTWKAIQLENIPKIYQVSVGSEHNVALTE-----NGKILC 330
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
WG G G+G D +P+ + + Y + +G HS
Sbjct: 331 WGWNEHGNCGNGHTKDVKFPEQLLL--SYNYVGILVGSGAAHS 371
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-----LACGGAHVLALTSPSSVIGG 91
+++G GQLG ++ ++ P+ L LS L G +HV+ L +
Sbjct: 224 YAFGDNKYGQLG---INTDIFPKTLIPIKLSDFQFKLPFNLYSGWSHVIVLKN------N 274
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR + GQLG ++ + K + + + I +S G H+ ++++G + G
Sbjct: 275 YIFGWGRNTYGQLGIAQLEKSSTWKAIQLENIPK--IYQVSVGSEHNVALTENGKILCWG 332
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
G G+G + P ++ N + G HS ++K
Sbjct: 333 WNEHGNCGNGHTKDVKFPEQLLLSYNYVGILVGSGAAHSFAVIK 376
>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
Length = 991
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 170/387 (43%), Gaps = 74/387 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG G+LG G D PQL+ + + ++ACG H A+T + G++++
Sbjct: 310 VFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGDFHTCAVT-----LSGELYT 364
Query: 96 WGRG--SSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WG S G +GH V PK ++ +G R I+ I+ G H+ VS +G LFT GD
Sbjct: 365 WGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVR--ISSIACGAWHTALVSSAGQLFTFGD 422
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GTFG LGHGD R+ + P +V S + ACG+ H+ +++
Sbjct: 423 GTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVE----------------- 465
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--FNSTSDVN 270
IVG S SA + G L+TWG G +
Sbjct: 466 -----------------------VIVGYS-----SATSCSSGKLFTWGDGDKYRLGHGDK 497
Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ +P+ ++ F Q A G + + LT G V +G + +G L +P + P
Sbjct: 498 EQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNP-KADGKVPGM 556
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V E V +I GA H A ++ I TWG G +G+LG G+ D+ P +V
Sbjct: 557 VDGELARTF----VEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVE- 611
Query: 385 GDEFQNRDTQLE-VFCGSGFTYAISRH 410
RD Q++ V CGS FT I H
Sbjct: 612 ----ALRDKQVKTVACGSSFTAVICLH 634
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 124/320 (38%), Gaps = 77/320 (24%)
Query: 105 GHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
G G VD+L PK + D ++ I+ G H+ V+ G +F G+ G+LGHG
Sbjct: 270 GAGSRVDSLVPKALQAAVVLD-----VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHG 324
Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
S P V + N +ACG H+ + L ++Y +G+ + V
Sbjct: 325 IDVDVSEPQLVQALAGVNAELVACGDFHTCAVT---LSGELYTWGADAQSGGLVGHSNPV 381
Query: 222 SVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS 280
S +P+ ++ L + I I+ +A +S+ G L+T+
Sbjct: 382 SHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTF--------------------- 420
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
GDG +LG L+ P+ V S L G+K ++
Sbjct: 421 ---------------GDGTFGVLGHGDKRNLAIPKEVES-------------LKGLKTVR 452
Query: 341 IAAGAEHSAVVTE------------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
A G H+A V E + + TWG G+ +LG G+ ++ P V ++
Sbjct: 453 AACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY 512
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
R +V CG T A++
Sbjct: 513 NFR----QVACGHSLTVALT 528
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 181/381 (47%), Gaps = 46/381 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + V ++CGG H +T G+++SWG S G+LGHG D
Sbjct: 336 DCLVPKPLEFAVRLDVQNISCGGRHAALVTK-----QGEIYSWGEESGGRLGHGVDCDVS 390
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
PK + I ++ G H+ V+ SG L+T GDGTF G LGHG+ SH P
Sbjct: 391 QPKLIDALS--HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKH 448
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
V+ + +V I+CG H+ V+ Q++ FG G G LG DR S+S+P+
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTS---AGQLFTFGDGSFGVLG-HGDR-ESISVPREVE 503
Query: 231 GL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQSL 275
L H +V + A G+ S++ + G ++TWG G P+ +
Sbjct: 504 SLKGLRTVRAACGVWHTAAVVEVMA-GNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLV 562
Query: 276 PSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P+ ++ F Q A G + LT G V +G + +G L + + P+ V +
Sbjct: 563 PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQ-ADGMLPVRVEGKL 621
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
N V +I+ GA H AV+T + TWG G +G+LG G+T D+ P +V + +
Sbjct: 622 HKNF----VEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLV---EALK 674
Query: 390 NRDTQLEVFCGSGFTYAISRH 410
++ ++ V CG FT AI H
Sbjct: 675 DKQVRI-VVCGINFTAAICIH 694
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 29/297 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P+L++ S ++ ++ACG H A+T + G ++
Sbjct: 369 EIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVT-----LSGDLY 423
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G+ G LGHG + PK V +G ++ IS G H+ V+ +G LFT G
Sbjct: 424 TWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFG 481
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DG+FG LGHGD S S P +V S + ACG+ H+ +++ GN ++
Sbjct: 482 DGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKI 541
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG + V P L + ++ + AL+ GH+YT G
Sbjct: 542 FTWGDGDKGRLGHGDKGPKLV--PTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA 599
Query: 263 F-----NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
N+ +D P + L + + G HV VLT EV G +G L
Sbjct: 600 VYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRL 656
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG G +L P + + +ACG +ALT+ G V+
Sbjct: 540 KIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTT-----SGHVY 594
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + D + P V +G H+ + IS G H ++ ++T G
Sbjct: 595 TMGSAVYGQLGNAQ-ADGMLPVRV---EGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGK 650
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG----SG 208
G G+LGHGD ++P V + +K V + CG+ + + C+ V G SG
Sbjct: 651 GANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAI---CIHKWVSGVDQSMCSG 707
Query: 209 KRGQLGVSKDR 219
R + + R
Sbjct: 708 CRQPFNLRRKR 718
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 167/363 (46%), Gaps = 33/363 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG +G LG G + SP + + L+ ++ ++ G AH +AL S G V++
Sbjct: 56 VWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGITAISAGWAHFVALKSD-----GTVWT 108
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G SG+LG G P P+ G IT ISAGWNH+ + G L++ G +
Sbjct: 109 WGVGYSGELGDGTNSLRTTPAPINGLTG----ITAISAGWNHTLALKADGTLWSWGQNQY 164
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G+ + + P++V + + I+ G HSLV+ D V+ +G GQLG
Sbjct: 165 GQLGTGNTTNSNIPLQVPGQI--GITSISSGGGHSLVIKND---GTVWSWGCNNFGQLGN 219
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
+ P GL+ I+ +SA S AL ++G ++ WG F + D
Sbjct: 220 GTNSNNPT--PHQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDS 275
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P GW + DG + G + +G L + + T P+ +
Sbjct: 276 YIPVQANGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPM-----Q 330
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
VS+L G+ I GA ++ + + I +G +GQLG G T P++V++GD +
Sbjct: 331 VSSLSGITAID--TGATYTVALKTDGNIFAFGENTYGQLGNGTTTGSTTPELVSIGDTYV 388
Query: 390 NRD 392
D
Sbjct: 389 ATD 391
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 132/298 (44%), Gaps = 26/298 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V+SWG +G LG G ++ P V +G IT ISAGW H + G ++T
Sbjct: 54 GTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNG----ITAISAGWAHFVALKSDGTVWTW 109
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G G+LG G ++P ++ + I+ G H+L L D ++ +G +
Sbjct: 110 GVGYSGELGDGTNSLRTTPAPINGLT--GITAISAGWNHTLALKAD---GTLWSWGQNQY 164
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFN 264
GQLG ++ L QV I I IS+ G S + +G +++WG G
Sbjct: 165 GQLGTGNTTNSNIPL-QVP---GQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNG 220
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ S+ P + + G H L DG V G + G L++ ++ S P+
Sbjct: 221 TNSNNPTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPV- 279
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ + L+G +I I AG E S+ + + WG ++GQLG G+ D P V
Sbjct: 280 ----QANGLNG--IIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQV 331
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+SAG + + + G +++ G G LG G + +SPV+V + I+ G H
Sbjct: 40 VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL--NGITAISAGWAHF 97
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ L D V+ +G G G+LG + +R+ P GL I ISA + + AL
Sbjct: 98 VALKSD---GTVWTWGVGYSGELGDGTNSLRTTPAP--INGLTG--ITAISAGWNHTLAL 150
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
A+G L++WG+ G +T++ N P +P + + + G H LV+ DG V G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG 210
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
++ G L + ++ P ++S L+G +I ++AG HS + + + WG
Sbjct: 211 CNNFGQLGNGTNSNNPTP-----HQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNF 263
Query: 365 HGQLGLGNTCDQIHPKVVN 383
G+L GN D P N
Sbjct: 264 RGELANGNKIDSYIPVQAN 282
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 238 VGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHV 291
+ +SA + AL +G +++WG N +TS+ N P + + + GW H
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHF 97
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ L DG V G + G L D T P ++ L G+ I+AG H+ +
Sbjct: 98 VALKSDGTVWTWGVGYSGELGDGTNSLRTTP-----APINGLTGITA--ISAGWNHTLAL 150
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + +WG ++GQLG GNT + P
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIP 178
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 146/304 (48%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS EG + WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 157/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K+ + + +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKE---GEFFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ +GE G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 57/231 (24%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALT-------- 83
+V++WG +DGQLG G P+ N+ SLS + + +ACG H LAL+
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLALSKEGEFFCW 161
Query: 84 ------------------SPSSV----------------------IGGKVFSWGRGSSGQ 103
SP + + G +F WGR GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG + D P + + I +I G +H+ ++ G +FT G G +GQLGH
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+P KV + V QIACG +H+ + ++Y FG G GQLG
Sbjct: 280 SHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 160/332 (48%), Gaps = 27/332 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
V++ G GQ G G + ++ + LS ++ +SM+A G H+LA+ S G
Sbjct: 518 VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIA-ISMVAAANGCEHMLAVAS-----DG 571
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG GQLG G + + + +Y IT + ++HS VS +G L T G
Sbjct: 572 AVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFG 631
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG + +P V + ++ V + ACG+ H++ D +VY FG G
Sbjct: 632 MNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSD---GEVYSFGKNDYG 688
Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLG+ R I++ +L + ++G D +IV +S + +S +G L TWGR G
Sbjct: 689 QLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 748
Query: 265 STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SST 320
S N Q LP S A+ G H L+L +G V++ G ++ G L R S+
Sbjct: 749 SKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSAD 808
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
PL V ++N +V++IAAG S ++T
Sbjct: 809 LPLPVPSNSLAN---DEVVRIAAGFYSSYILT 837
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++FS G+ + G+L G + V FF I ++ G V + G +FTCG
Sbjct: 465 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAK--GIRDVAGGNEVLAVVMNDGGVFTCG 522
Query: 152 DGTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
GQ G+G + ++PV+ S + ++ A G H L + D V+ +G
Sbjct: 523 LNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASD---GAVFSWGYN 579
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------ 261
RGQLG+ I P++ L + I + + SA +S+ G L T+G
Sbjct: 580 DRGQLGLGST-ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQL 638
Query: 262 GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G + T + PQ + SS ++AA G H + T DGEV G + +G L +
Sbjct: 639 GLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNI 698
Query: 320 TRPLSVALEKVS-NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P AL K S K++ ++ G H+ ++E ++TWG ++GQLG+G+
Sbjct: 699 KTP---ALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ ++G GQLG + +PQ+++ S V+ ACG H +A TS G+V+
Sbjct: 626 ELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATS-----DGEVY 680
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
S+G+ GQLG G + P V T I +S G+ H+ +S+ G L T G
Sbjct: 681 SFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRN 740
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G +S V ++ + +CG HSL+L+ + +V FG +GQL
Sbjct: 741 DYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSN---GRVMVFGRNNKGQL 797
Query: 214 GVSKDRIRS--VSLPQVTIGLHDIEIVGISA 242
G + S + LP + L + E+V I+A
Sbjct: 798 GAGARTLSSADLPLPVPSNSLANDEVVRIAA 828
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 157/376 (41%), Gaps = 37/376 (9%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV 69
E G+S ++ P + EE +++S G G+L G + + + S +
Sbjct: 448 EAGRSEML----PTVASFEE----CELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGI 499
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTI 128
+A GG VLA+ + G VF+ G SGQ G+G + + PV G ++
Sbjct: 500 RDVA-GGNEVLAVV----MNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISM 554
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNK-NVHQIACG 186
+ G H V+ G +F+ G GQLG G S S +P + S K ++ A
Sbjct: 555 VAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVS 614
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS V+ + ++ FG GQLG+ D + PQV L + +
Sbjct: 615 YHHSAVVSSN---GELLTFGMNDCGQLGL--DHTQHQHTPQVVDALSSQVVTKAACGLYH 669
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAAL-----GWNHVLVLT 295
+ A +++G +Y++G+ G ++ P + +SL S + G+ H + ++
Sbjct: 670 TVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTIS 729
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G+++ G + +G L + V L S K+ + G HS ++ N
Sbjct: 730 EKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSS-----KIKNASCGCYHSLILMSNG 784
Query: 356 AIMTWGWGEHGQLGLG 371
+M +G GQLG G
Sbjct: 785 RVMVFGRNNKGQLGAG 800
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
LF+CG +G+L G S S V F K + +A G V++ D V+ G
Sbjct: 466 LFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMND---GGVFTCG 522
Query: 207 SGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
K GQ G ++R+ ++ P + I +V + + A++++G +++WG
Sbjct: 523 LNKSGQCGNGTFEERV-IIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDR 581
Query: 262 ---GFNST-SDVNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G ST S + P+ SL + AA+ ++H V++ +GE+L G + G L
Sbjct: 582 GQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLD 641
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
P + V L V + A G H+ T + + ++G ++GQLGLG+
Sbjct: 642 HTQHQHTP-----QVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHAR 696
Query: 375 DQIHPKVV--NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ P +V +LG ++ + + V CG T IS
Sbjct: 697 NIKTPALVKTSLG---ESDEKIVAVSCGYYHTVTIS 729
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+ +WG GQLG G + S Q + L S + +CG H L L S G+V
Sbjct: 733 KLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMS-----NGRVM 787
Query: 95 SWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
+GR + GQLG G + A P PV + I+AG+ S ++
Sbjct: 788 VFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAGFYSSYILT 837
>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
Length = 1162
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 179/384 (46%), Gaps = 43/384 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L S++ V +A G H+ T G VF+WG+ S G+LGHG D
Sbjct: 185 DVLIPKALE-SNVLDVCHIATGAHHIAIATR-----QGHVFTWGQESGGRLGHGIDKDFS 238
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
P V F +G+ + ++ G H+ +S S L+T GDGT G LGHG SH P
Sbjct: 239 SPVLVEFLEGNNFEF--VACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296
Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP---Q 227
V+ V IACG HS + + +++ FG G G LG SV P Q
Sbjct: 297 VNGPLEGLQVVSIACGTWHSALATSN---GKLFTFGDGAFGVLGHGDQE--SVWYPKEVQ 351
Query: 228 VTIGLHDIEIV-------GISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQ 273
+ GL I++ I +S + S+ L+TWG G N + + +
Sbjct: 352 LLTGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTR 411
Query: 274 SLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
P +F Q G N + LT G V +GG+ HG L +P +S + ++ +K
Sbjct: 412 VAPLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNP--MSLGKIPTLVQDK--- 466
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
L G V +I+ GA H A++T I TWG G +G+LG G+ D+ P +V ++R+
Sbjct: 467 LLGEFVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVV---ALKDRN 523
Query: 393 TQLEVFCGSGFTYAISRHCLPSQT 416
+ V CGS FT I H S+T
Sbjct: 524 IK-NVSCGSNFTSCICVHKWVSET 546
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHV-----LALTSPSSVI 89
K++++G G G LG G P+ + L + +ACG H +A S S+
Sbjct: 324 KLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVWHTAAIIEVAFQSGSNSS 383
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
K+F+WG G +LGHG L P V Y + G N + ++ SG +FT
Sbjct: 384 SWKLFTWGDGDMHRLGHGNKETYLQPTRVAPL--MEYNFHQVECGHNMTIALTTSGHVFT 441
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G GQLG+ + + + V +I+CG H +L +++Y +G G
Sbjct: 442 MGGTEHGQLGNPMSLGKIPTLVQDKLLGEFVEKISCGAHHVAILTNK---SEIYTWGMGA 498
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
G+LG + P + + L D I +S + ++ +
Sbjct: 499 NGRLG--HGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCI 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 74/312 (23%)
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
D L PK + + + + HI+ G +H + G +FT G + G+LGHG + SSP
Sbjct: 184 TDVLIPKAL---ESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSP 240
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR--GQLGVSKDRIRSVSLPQ 227
V V N +ACG H+ L K ++Y +G G G LG + S +P+
Sbjct: 241 VLVEFLEGNNFEFVACGEYHTSALSKSF---ELYTWGDGTHNVGLLGHGSE--ASHWIPK 295
Query: 228 VTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL 286
+ G L +++V I+ SA ++ G L+T+
Sbjct: 296 MVNGPLEGLQVVSIACGTWHSALATSNGKLFTF--------------------------- 328
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
GDG +LG HG ++ S P V L L G+K I++A G
Sbjct: 329 ---------GDGAFGVLG---HG-----DQESVWYPKEVQL-----LTGLKTIKVACGVW 366
Query: 347 HSAVVTE----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 396
H+A + E + + TWG G+ +LG GN + P V E+ +
Sbjct: 367 HTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNFH----Q 422
Query: 397 VFCGSGFTYAIS 408
V CG T A++
Sbjct: 423 VECGHNMTIALT 434
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P + + + CG +ALT+ G VF
Sbjct: 386 KLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNFHQVECGHNMTIALTT-----SGHVF 440
Query: 95 SWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G GQLG+ G++ + K + F + IS G +H +++ ++T
Sbjct: 441 TMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF------VEKISCGAHHVAILTNKSEIYTW 494
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH-SLVLLKDCLGNQVYGFGSGK 209
G G G+LGHGD SP V + ++N+ ++CG S + + + +G
Sbjct: 495 GMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCICVHKWVSETDQSIYNGF 554
Query: 210 RGQLGVSKDR 219
R G++K R
Sbjct: 555 RQAFGLTKKR 564
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 188/408 (46%), Gaps = 59/408 (14%)
Query: 36 VWSWGA---------GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
V+ WG GT Q+ +D L+P+ L + + V +ACG H+ +T
Sbjct: 90 VYVWGEIWTDLVLPDGTSSQIPVK--NDVLTPKPLETNVVLDVQQIACGVRHIALVTR-- 145
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI---SAGWNHSGFVSD 143
G+VF+WG G+LGHG D P V F ++H+ + G H+ ++
Sbjct: 146 ---QGEVFTWGEECGGRLGHGIDRDFSRPHLVEFL-----AVSHVDFVACGEYHTCAITS 197
Query: 144 SGCLFTCGDGTF--GQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGN 200
S L+T GDG F G LGHG SH P +V S V +ACG HS + +
Sbjct: 198 SNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSN---G 254
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANGDRSAALSAEG-- 254
++Y FG G G LG DR SV P Q+ GL I++ G+ +S G
Sbjct: 255 KLYTFGDGTYGVLG-HGDR-ESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSN 312
Query: 255 ----HLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLM 302
L+TWG G ++ LP+ +S F Q A G N + LT G V
Sbjct: 313 MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFT 372
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
+GG+ +G L +P SS + ++ L G V +I+ GA H+ V+T + +WG
Sbjct: 373 MGGTAYGQLGNP---SSDGVIPCLVQ--DRLVGEFVEEISCGAYHTVVLTSRNEVFSWGR 427
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G +G+LG G+ D+ P ++ + ++R + + CGS FT +I H
Sbjct: 428 GSNGRLGHGDVEDRKAPTLI---EALKDRHVK-SISCGSNFTASICIH 471
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 27/295 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P L+ ++S V +ACG H A+TS ++
Sbjct: 148 EVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITS-----SNDLY 202
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G +SG LGHG + PK V +G + ++ G HS + +G L+T G
Sbjct: 203 TWGDGIFNSGILGHGTDISHWIPKRVVGSLEG--LQVLSVACGTWHSALATSNGKLYTFG 260
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGT+G LGHGD S P +V ++ACG+ H+ +++ + +++
Sbjct: 261 DGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFT 320
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----W 259
+G G + +LG + LP L D ++ + + AL+ GH++T +
Sbjct: 321 WGDGDKYRLGHGNK--ETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAY 378
Query: 260 GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G+ N +SD P + L + + G H +VLT EV G +G L
Sbjct: 379 GQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRL 433
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 133/340 (39%), Gaps = 84/340 (24%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
G V+ WG G+S Q+ D L PKP+ + I+ G H V
Sbjct: 88 GDVYVWGEIWTDLVLPDGTSSQIPVKN--DVLTPKPLE--TNVVLDVQQIACGVRHIALV 143
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
+ G +FT G+ G+LGHG R S P V +V +ACG H+ + N
Sbjct: 144 TRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITS---SND 200
Query: 202 VYGFGSG--KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYT 258
+Y +G G G LG D S +P+ +G L ++++ ++ SA ++ G LYT
Sbjct: 201 LYTWGDGIFNSGILGHGTD--ISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNGKLYT 258
Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+G G +G+L +R S
Sbjct: 259 FGDG--------------------------------------------TYGVLGHGDRES 274
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGWGEHGQL 368
P V L L G++ I++A G H+A + E +R + TWG G+ +L
Sbjct: 275 VVYPREVQL-----LSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRL 329
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G GN + P V+ ++ ++ CG T A++
Sbjct: 330 GHGNKETYLLPTCVSSLIDYNFH----QLACGHNMTVALT 365
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + LACG +ALT+ G VF
Sbjct: 317 KLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT-----SGHVF 371
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG+ D + P V + + IS G H+ ++ +F+ G G+
Sbjct: 372 TMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEF-VEEISCGAYHTVVLTSRNEVFSWGRGS 429
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
G+LGHGD +P + + +++V I+CG + + C+ V G +G R
Sbjct: 430 NGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASI---CIHKWVSGADQSVCTGCR 486
Query: 211 GQLGVSKDR 219
G ++ R
Sbjct: 487 QAFGFTRKR 495
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 188/408 (46%), Gaps = 59/408 (14%)
Query: 36 VWSWGA---------GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
V+ WG GT Q+ +D L+P+ L + + V +ACG H+ +T
Sbjct: 228 VYVWGEIWTDLVLPDGTSSQIPVK--NDVLTPKPLETNVVLDVQQIACGVRHIALVTR-- 283
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI---SAGWNHSGFVSD 143
G+VF+WG G+LGHG D P V F ++H+ + G H+ ++
Sbjct: 284 ---QGEVFTWGEECGGRLGHGIDRDFSRPHLVEFL-----AVSHVDFVACGEYHTCAITS 335
Query: 144 SGCLFTCGDGTF--GQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGN 200
S L+T GDG F G LGHG SH P +V S V +ACG HS + +
Sbjct: 336 SNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSN---G 392
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLP---QVTIGLHDIEIV-GISANGDRSAALSAEG-- 254
++Y FG G G LG DR SV P Q+ GL I++ G+ +S G
Sbjct: 393 KLYTFGDGTYGVLG-HGDR-ESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSN 450
Query: 255 ----HLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNHVLVLTGDGEVLM 302
L+TWG G ++ LP+ +S F Q A G N + LT G V
Sbjct: 451 MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFT 510
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
+GG+ +G L +P SS + ++ L G V +I+ GA H+ V+T + +WG
Sbjct: 511 MGGTAYGQLGNP---SSDGVIPCLVQ--DRLVGEFVEEISCGAYHTVVLTSRNEVFSWGR 565
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G +G+LG G+ D+ P ++ + ++R + + CGS FT +I H
Sbjct: 566 GSNGRLGHGDVEDRKAPTLI---EALKDRHVK-SISCGSNFTASICIH 609
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 27/295 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P L+ ++S V +ACG H A+TS ++
Sbjct: 286 EVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITS-----SNDLY 340
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G +SG LGHG + PK V +G + ++ G HS + +G L+T G
Sbjct: 341 TWGDGIFNSGILGHGTDISHWIPKRVVGSLEG--LQVLSVACGTWHSALATSNGKLYTFG 398
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGT+G LGHGD S P +V ++ACG+ H+ +++ + +++
Sbjct: 399 DGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFT 458
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----W 259
+G G + +LG + LP L D ++ + + AL+ GH++T +
Sbjct: 459 WGDGDKYRLGHGNK--ETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFTMGGTAY 516
Query: 260 GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G+ N +SD P + L + + G H +VLT EV G +G L
Sbjct: 517 GQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRL 571
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 134/343 (39%), Gaps = 90/343 (26%)
Query: 91 GKVFSWGR---------GSSGQLGHGEMVDALYPKPV---TFFDGHRYTITHISAGWNHS 138
G V+ WG G+S Q+ D L PKP+ D + I+ G H
Sbjct: 226 GDVYVWGEIWTDLVLPDGTSSQIPVKN--DVLTPKPLETNVVLD-----VQQIACGVRHI 278
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
V+ G +FT G+ G+LGHG R S P V +V +ACG H+ +
Sbjct: 279 ALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCAITS--- 335
Query: 199 GNQVYGFGSG--KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGH 255
N +Y +G G G LG D S +P+ +G L ++++ ++ SA ++ G
Sbjct: 336 SNDLYTWGDGIFNSGILGHGTD--ISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNGK 393
Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
LYT+G G +G+L +
Sbjct: 394 LYTFGDG--------------------------------------------TYGVLGHGD 409
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGWGEH 365
R S P V L L G++ I++A G H+A + E +R + TWG G+
Sbjct: 410 RESVVYPREVQL-----LSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDK 464
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+LG GN + P V+ ++ ++ CG T A++
Sbjct: 465 YRLGHGNKETYLLPTCVSSLIDYNFH----QLACGHNMTVALT 503
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + LACG +ALT+ G VF
Sbjct: 455 KLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT-----SGHVF 509
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG+ D + P V + + IS G H+ ++ +F+ G G+
Sbjct: 510 TMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEF-VEEISCGAYHTVVLTSRNEVFSWGRGS 567
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG----FGSGKR 210
G+LGHGD +P + + +++V I+CG + + C+ V G +G R
Sbjct: 568 NGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASI---CIHKWVSGADQSVCTGCR 624
Query: 211 GQLGVSKDR 219
G ++ R
Sbjct: 625 QAFGFTRKR 633
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNSKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG G+ D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 161/373 (43%), Gaps = 43/373 (11%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S S+ +ACGG H + L G+V++ G S GQLGH + P+
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTCGVNSKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQTSPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D C L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN------------LGDEFQNRDTQ 394
+ A V + I +G G GQLG G+TC+ P V D F+ R +
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYRVVK 365
Query: 395 LEVFCGSGFTYAI 407
++F G T+ +
Sbjct: 366 -QIFSGGDQTFVL 377
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGHG +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGHG M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHGSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + GQL
Sbjct: 324 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 353
Query: 215 VSKDRIRSVSLPQVTIG 231
DR + + Q+ G
Sbjct: 354 ARADRFKYRVVKQIFSG 370
>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
Length = 267
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)
Query: 15 ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC 74
A+IN +E+ +++ K++ WG D QLG E P+ +S ++
Sbjct: 2 AIINAPNNGLEDNAQQEYSNKLFVWGCSDDWQLGI-----ETGPKNYQISDPVQITPDYW 56
Query: 75 GGA--HVLALTSPSSVIG--GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTIT 129
G + A ++ S I G VFSWG G G+LG+ + V YPK + F +T
Sbjct: 57 QGKLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVT 116
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
I+ G +HS ++ G L+T G G GQLGHG ++ P KV F + V +IACG H
Sbjct: 117 KIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSH 176
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
++ ++ GN VYG+G + GQLG + V+LP+ + + E+V I S A
Sbjct: 177 TMAIIS---GNLVYGWGFNQAGQLGFQD--LSRVNLPKKIMFFNQKEVVQIQCGKKHSIA 231
Query: 250 LSAEGHLYTWG 260
L+ EG +Y+WG
Sbjct: 232 LTVEGQVYSWG 242
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 167 SSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
S PV+++ + + +I +S+ + D GN V+ +GSG+ G+LG KD ++
Sbjct: 46 SDPVQITPDYWQGKLEKIYAQSNYSMSI--DTKGN-VFSWGSGEFGRLGYEKD-VKYQKY 101
Query: 226 PQV--TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS 277
P++ T + +I + I+ SAA + +G LYTWG+G N S + P+ +
Sbjct: 102 PKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKE 161
Query: 278 --SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPLSVALEKVSNL 333
+ + A G +H + + V G + G L D RV+ + K+
Sbjct: 162 FQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPK-------KIMFF 214
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
+ +V+QI G +HS +T + +WG E+GQLG+
Sbjct: 215 NQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGI 251
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +GQLG G +E P+ + V +ACG +H +A+ S G V+
Sbjct: 133 KLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIIS-----GNLVY 187
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG +GQLG ++ PK + FF+ + + I G HS ++ G +++ G
Sbjct: 188 GWGFNQAGQLGFQDLSRVNLPKKIMFFN--QKEVVQIQCGKKHSIALTVEGQVYSWGSNE 245
Query: 155 FGQLG 159
+GQLG
Sbjct: 246 YGQLG 250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
N+ + + G V G G L + V + + +E S + + V +IA G HS
Sbjct: 68 NYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKI-IETFS-IQNIIVTKIALGTHHS 125
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
A T + TWG G +GQLG G+ ++ PK V EFQ+ LE+ CG T AI
Sbjct: 126 AACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKV---KEFQDIRV-LEIACGDSHTMAI 180
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 167/383 (43%), Gaps = 33/383 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
W G G + + PQ S S+ +ACGG H + L G+V++ G
Sbjct: 7 WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLE-----DGEVYTCGS 61
Query: 99 GSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+ GQ
Sbjct: 62 NTKGQLGHER--EGNKPEQIGALADQH---IVHVACGESHSLALSDQGQLFSWGAGSDGQ 116
Query: 158 LGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH S + P + + + Q++CG H + L D Q + +G + GQLG+
Sbjct: 117 LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAAD---GQFFTWGQNRHGQLGLG 173
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
K+ S + PQ L I + ++A G S ALS G ++ WGR G + +D
Sbjct: 174 KE-FPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ 232
Query: 271 --CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
C L + + G H VLT G V G G L P
Sbjct: 233 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNP-----R 287
Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 288 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK--GH 345
Query: 388 FQNRDTQLEVFCGSGFTYAISRH 410
+ + QL S F Y I +H
Sbjct: 346 WAAHNGQLSSRADS-FKYHIVKH 367
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 158 QFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS-----LSGAV 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 213 FGWGRNNAGQLGLSDETDRQSPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+FGQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 271 SFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 328
Query: 214 G 214
G
Sbjct: 329 G 329
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 266
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 325 RGQLGTG----HTCNVKCPSPVK 343
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 159/378 (42%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G G G+LG G + P LL V +A GG H LAL+S G
Sbjct: 3949 KVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4003
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + PK + G I ++ G +HS ++ +G L+T G
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTE--IVDVACGGHHSAAITSAGWLYTWGK 4061
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD +P V + + V +ACG +L + D + V+ +G G
Sbjct: 4062 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4118
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + ++ + S AL+ G +YTWG+G
Sbjct: 4119 GKLG--RGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKG-------- 4168
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4169 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4187
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H ++ + TWG + GQLG G TC P++V+ Q
Sbjct: 4188 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVH---ALQG 4244
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 4245 KKIT-RVACGSAHTLAWS 4261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 173/392 (44%), Gaps = 37/392 (9%)
Query: 29 EEQQVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
E Q V+ WG QLG + +L +LS L V + GG+ L + S
Sbjct: 2904 ETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHI--AGGSKTLFVVSQE- 2960
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
GK+++ G G++G+LG G+ +A PKP+ F + + +G H+ ++ G +
Sbjct: 2961 ---GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRV 3017
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
F+ G+G G+LGHG+ S P + S +K + +ACG HS + ++Y +G
Sbjct: 3018 FSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITS---SGELYTWGL 3074
Query: 208 GKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG- 262
G+ G+LG + L Q +G I++ A G R A AL+A+G +Y+WG G
Sbjct: 3075 GEYGRLGHGDTNTQLKPKLVQSLVGQRVIQV----ACGSRDAQTMALTADGSVYSWGDGD 3130
Query: 263 ---FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
C L + L Q G L LT GEV G + L
Sbjct: 3131 FGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3190
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+P V L G KVI +A GA H VT+ + WG +HGQ G G+T
Sbjct: 3191 DHHVRKP-----TLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIV 3245
Query: 376 QIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
P +V+ L D NR V CGS + A
Sbjct: 3246 NKKPSLVHELDDARVNR-----VSCGSSHSIA 3272
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G P+L+ +++ +ACG + AL+S G++++
Sbjct: 527 VYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSS-----NGELYT 581
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG+ G+LGHG D + P V+ +GH +G + + V+ SG +F+ GDG +
Sbjct: 582 WGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDY 641
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G +P V ++ NV ++ CG + S L +VY +G G+ +LG
Sbjct: 642 GKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEAYRLGH 698
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ V P+ L ++ + AL+ + +Y WGR
Sbjct: 699 GNE--EHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGR 742
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + V LP + L + V ++ A++A+G +Y G
Sbjct: 3898 IYGWGHNHRGQLGGLEGA--KVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3955
Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
G T V P L S + + A+ G H L L+ +G V G G L
Sbjct: 3956 GAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4015
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R+S RP + + L G +++ +A G HSA +T + TWG G +G+LG G
Sbjct: 4016 GHGNRLSYDRP-----KLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4070
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V +++ ++V CGSG
Sbjct: 4071 DSEDQLTPKLVEALQDYK----VIDVACGSG 4097
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 146/353 (41%), Gaps = 44/353 (12%)
Query: 27 EEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
+ + Q + +V +WG+ G GTG SP + + + L C ++ L++
Sbjct: 429 KNQSQTLQEVLAWGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILST-- 479
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSG 145
G V+ GS Q YP+ V F D I G ++ DS
Sbjct: 480 ---SGNVYMMYYGSETQ----------YPQRVYGFSDKFVAMIASHPDGKHYLALTEDSS 526
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+++ G+G G+LGHGD + P + S V+KN+ IACG +S L + ++Y +
Sbjct: 527 -VYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN---GELYTW 582
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
G G G+LG V +P + L H I V + ++ ++A G +++WG G
Sbjct: 583 GRGNYGRLGHGNS--DDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640
Query: 263 FNSTSDVNC-----PQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ C P+ + L + A + G LT GEV G L
Sbjct: 641 YGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGN 700
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
P + + L KV ++ G+ H +TE++ + WG ++GQ+
Sbjct: 701 EEHVRYP-----KAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI 748
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P +V F +K V IA +H L L +D + VY +G+G G+LG DR P
Sbjct: 495 PQRVYGFSDKFVAMIASHPDGKHYLALTED---SSVYSWGNGDGGRLG-HGDRTW-YEEP 549
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS 280
++ L D I I+ SAALS+ G LYTWGRG ++ DV P +L S+L+
Sbjct: 550 KLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVP-TLVSALN 608
Query: 281 -----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
+ G + L +T G V G +G L S P + V L
Sbjct: 609 GHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTP-----KIVDKLLD 663
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V ++ G + SA +T + TWG GE +LG GN +PK +
Sbjct: 664 INVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAI 710
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 44/260 (16%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
SSP + + Q+ C R ++L GN VY G Q P
Sbjct: 451 SSPFYCDAIAELGIKQLCCTERALMILSTS--GN-VYMMYYGSETQY------------P 495
Query: 227 QVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSS 278
Q G D + ++ +G AL+ + +Y+WG G + P+ + S
Sbjct: 496 QRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESL 555
Query: 279 L--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSN 332
+ + + A G + L+ +GE+ G ++G L SD V + VS
Sbjct: 556 VDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTL---------VSA 606
Query: 333 LDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L+G ++ +A G+ + VT + + +WG G++G+LG G PK+V D+ +
Sbjct: 607 LNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIV---DKLLD 663
Query: 391 RDTQLEVFCGSGFTYAISRH 410
+ +V+CG F+ A++ +
Sbjct: 664 INVA-KVYCGGQFSAALTAY 682
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGHG R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHG--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 150/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGHG + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHGR--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ KD S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKD-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + RGQL
Sbjct: 324 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHRGQLS 353
Query: 215 VSKDRIRSVSLPQVTIG 231
+ DR + + Q+ G
Sbjct: 354 ATADRFKYHIVKQIFSG 370
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEGGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG++ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLTTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T+N + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 158/358 (44%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L GG+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----GGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT +G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ +G +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKNGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----NGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 163/361 (45%), Gaps = 30/361 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG + GQLG G + DE L+P + + S++ +ACG H L LTS G+
Sbjct: 6 ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTS-----SGR 60
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++ G QLGH D +P+ + Y + I+ G HS +S+ G + + GD
Sbjct: 61 VYACGSNDHSQLGH----DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGD 116
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG D P V V+K V QIACG HSL L C ++Y +GS G
Sbjct: 117 NDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLA-LTSC--GELYSWGSNIYG 173
Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV+ + + + P L I + I+ G+ S +S ++ WGR G N
Sbjct: 174 QLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLN 233
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + P L + +L A G + LT +G V G +G L + P
Sbjct: 234 DETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLP 293
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
V L G + Q+A G H+ + +R + +G G GQLG +T P+V
Sbjct: 294 -----RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLPQV 348
Query: 382 V 382
V
Sbjct: 349 V 349
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 142/304 (46%), Gaps = 22/304 (7%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G +++ WG S GQLG G + D P I ++ G H+ F++ SG ++
Sbjct: 4 GTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYA 63
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG QLGH P+ + ++ V QIACG RHS+ L + QV +G
Sbjct: 64 CGSNDHSQLGHD--LPTKRPLLIPELLDYVVVQIACGSRHSMALSE---WGQVLSWGDND 118
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + D+ V LP++ L +V I+ + S AL++ G LY+WG G
Sbjct: 119 CGQLGQATDQ-DIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 264 NSTSDV---NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
N+ +V N P L + L AA+ G NH +++ V G ++ G L + S
Sbjct: 178 NTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETS 237
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ P ++ L + V +A G E S +T + T G G +GQLG G +++
Sbjct: 238 RSYP-----TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEML 292
Query: 379 PKVV 382
P++V
Sbjct: 293 PRMV 296
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG + S Q + L++L V+ +ACGG H ++ S+V G
Sbjct: 163 ELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFG- 221
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WGR + GQLG + YP + + ++ G S F+++ G +FTCG
Sbjct: 222 ----WGRNNCGQLGLNDETSRSYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTCG 275
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ +VYGFG G G
Sbjct: 276 AGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYGFGLGSSG 333
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +S++LPQV IG
Sbjct: 334 QLGTRS--TKSLTLPQVVIG 351
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 39/268 (14%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G+ + GQLG G +P +V + + Q+ACG RH+L L +VY
Sbjct: 7 LYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTS---SGRVYA 63
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
GS QLG R + +P+ L D +V I+ S ALS G + +WG
Sbjct: 64 CGSNDHSQLGHDLPTKRPLLIPE----LLDYVVVQIACGSRHSMALSEWGQVLSWGDNDC 119
Query: 263 --FNSTSDVNCPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--S 312
+D + Q LP S + Q A G NH L LT GE+ G + +G L +
Sbjct: 120 GQLGQATDQDIVQ-LPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 178
Query: 313 DPERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
P+ V+ S +P+ +++ L G+ V IA G HS +++++ A+ WG GQLGL
Sbjct: 179 TPKEVTHSNQPV-----RLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLN 233
Query: 372 NTCDQIHP-----------KVVNLGDEF 388
+ + +P + V GDEF
Sbjct: 234 DETSRSYPTQLKTLRTLGVRFVACGDEF 261
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 161/359 (44%), Gaps = 34/359 (9%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
G GQLGH + P+ V D I +S G H+ ++D G +++ G DG
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G LG +Y P + S + + Q+ACG HSL L K ++V+ +G K GQL
Sbjct: 115 QLGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQL 169
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+ D + S PQ+ L I + ++A G S L+ G ++ WGR G N +
Sbjct: 170 GLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D P L S S G +H LT +G V G +G L P
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP--- 285
Query: 326 ALEKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 --RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYSWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEEYIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K F NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y+WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLIK--SLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 156/355 (43%), Gaps = 36/355 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++W+WG GQLG G D P +NL+ + SV A G H AL S G V+
Sbjct: 419 RLWAWGDNQQGQLGNGTQQDSSLPLPVNLTDVISV---ASGYRHTAALRSD-----GTVW 470
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G + D P V G +T I+ G NHS + +G ++ G
Sbjct: 471 TWGMNRFGQLGEGTVTDRPTPVQVVGLGG----VTAIATGDNHSLALRSNGTVWAWGFNR 526
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G PV+ S N+ IA G HSL L D V+ FG GQLG
Sbjct: 527 YGQLGDGTAVDRRQPVQASGL--SNIVAIAAGGSHSLALRSD---GTVWAFGYNFDGQLG 581
Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ R+ +L P +GL +V ++A S AL A+G ++ WG G +T
Sbjct: 582 ---NGTRTWTLVPVQAVGLS--SVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQ 636
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P +P + A G H L L DG V G + G L + P VA
Sbjct: 637 GSAQPLQVPGLSGITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPGLVA- 695
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+SN + I AG +HS + + + WG GQLG G+T + P V
Sbjct: 696 -GMSN-----AVAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQV 744
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 170/402 (42%), Gaps = 76/402 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L L PQ +S+LS+V LA G AHVLAL + G V++
Sbjct: 121 VWAWGDNASGQLGDGTLTSRLLPQ--RVSALSNVVSLASGFAHVLALRAD-----GTVWA 173
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + QLG G + + P V G + + AG + S + G L+ GD +
Sbjct: 174 WGDNRNNQLGDGTLTRSSVPLQVPGLSG----VVAVVAGGSSSLALRADGTLWAWGDNRY 229
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V+S +V ++ G H+L L D V+ +G GQLG
Sbjct: 230 GQLGDGTTVRRITPVQVASL--DSVVSVSVGAYHALALRAD---GTVWAWGHNAYGQLGD 284
Query: 216 SKDRIR----SVSLPQVTI----GLHDIEI------------------------------ 237
+ R SVSL V H + +
Sbjct: 285 GTNTQRTQPVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSPLPLQ 344
Query: 238 ------VGISANGDRSAALSAEGHLYTWGRG-FNSTSDVNC-PQSLPS-----SLSFSQA 284
V + A S AL A+G ++WG F D P+ P +L + A
Sbjct: 345 AGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALGRADA 404
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
G H ++L +G + G + G L + + S+ PL V L VI +A+G
Sbjct: 405 TSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNL--------TDVISVASG 456
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLG 385
H+A + + + TWG GQLG G D+ P +VV LG
Sbjct: 457 YRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVGLG 498
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 163/359 (45%), Gaps = 47/359 (13%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GKVF 94
WSWG GQLG ++P VS LA G A + + ++G G+++
Sbjct: 370 WSWGDNVFGQLGDTTFEPRMAP--------VQVSGLALGRADATSGQLHTVMLGANGRLW 421
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG+G D+ P PV D + +++G+ H+ + G ++T G
Sbjct: 422 AWGDNQQGQLGNGTQQDSSLPLPVNLTD-----VISVASGYRHTAALRSDGTVWTWGMNR 476
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G +PV+V V IA G HSL L + V+ +G + GQLG
Sbjct: 477 FGQLGEGTVTDRPTPVQVVGL--GGVTAIATGDNHSLALRSN---GTVWAWGFNRYGQLG 531
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------- 265
+ DR + V ++ IV I+A G S AL ++G ++ +G F+
Sbjct: 532 DGTAVDRRQPVQASGLS------NIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTR 585
Query: 266 TSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
T + Q+ L S +S + +L + L L DG V G + G L S +PL
Sbjct: 586 TWTLVPVQAVGLSSVVSLAAGSL---YSLALRADGTVWAWGYNASGQLGVGTTQGSAQPL 642
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V L G+ IAAG+ HS + + + WG+ GQLG G + ++ P +V
Sbjct: 643 -----QVPGLSGIT--SIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPGLV 694
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 134/314 (42%), Gaps = 32/314 (10%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LA G H LA+ S G VF+WG GQLG G D P V +T +
Sbjct: 55 LALGQYHSLAVHSD-----GTVFAWGFNRLGQLGDGTSRDKASPVQVAGLT----QVTSV 105
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG +S + G ++ GD GQLG G S P +VS+ NV +A G H L
Sbjct: 106 AAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSAL--SNVVSLASGFAHVL 163
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L D V+ +G + QLG + S+P GL +V + A G S AL
Sbjct: 164 ALRAD---GTVWAWGDNRNNQLG--DGTLTRSSVPLQVPGLSG--VVAVVAGGSSSLALR 216
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+G L+ WG G +T P + S S ++G H L L DG V G
Sbjct: 217 ADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLDSVVSVSVGAYHALALRADGTVWAWGH 276
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ +G L D T+P+SV+L V L AG HS V + A+ WG +
Sbjct: 277 NAYGQLGDGTNTQRTQPVSVSLTDVRTL--------VAGNYHSLAVRTDGAVWAWGDNRY 328
Query: 366 GQLGLGNTCDQIHP 379
QLG GN P
Sbjct: 329 RQLGTGNLTSSPLP 342
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 158/353 (44%), Gaps = 41/353 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G ++P + ++SL SV ++ G H LAL + G V++
Sbjct: 221 LWAWGDNRYGQLGDGTTVRRITP--VQVASLDSVVSVSVGAYHALALRAD-----GTVWA 273
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G P V+ D + + AG HS V G ++ GD +
Sbjct: 274 WGHNAYGQLGDGTNTQRTQPVSVSLTD-----VRTLVAGNYHSLAVRTDGAVWAWGDNRY 328
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G+ S SP+ + + + V +A G RHS+ L D + +G GQLG
Sbjct: 329 RQLGTGNLTS--SPLPLQAGMTGGVTLVA-GYRHSVALGAD---GTAWSWGDNVFGQLGD 382
Query: 216 S--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ + R+ V + + +G D ++ + L A G L+ WG G +
Sbjct: 383 TTFEPRMAPVQVSGLALGRADA-----TSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQ 437
Query: 268 DVNCPQSLPSSLS-FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
D + P LP +L+ A G+ H L DG V G + G L E + RP V
Sbjct: 438 DSSLP--LPVNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLG--EGTVTDRPTPV- 492
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV I A G HS + N + WG+ +GQLG G D+ P
Sbjct: 493 --QVVGLGGVTAI--ATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQP 541
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 161/393 (40%), Gaps = 71/393 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G P + SL+ V L G H LA+ + G V++
Sbjct: 271 VWAWGHNAYGQLGDGTNTQRTQPVSV---SLTDVRTLVAGNYHSLAVRTD-----GAVWA 322
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG QLG G + + P G + AG+ HS + G ++ GD F
Sbjct: 323 WGDNRYRQLGTGNLTSSPLPLQAGMTGG-----VTLVAGYRHSVALGADGTAWSWGDNVF 377
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG + +PV+VS + G H+++L + +++ +G ++GQLG
Sbjct: 378 GQLGDTTFEPRMAPVQVSGLALGRADATS-GQLHTVMLGAN---GRLWAWGDNQQGQLGN 433
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ S+ LP ++ +++ +++ +AAL ++G ++TWG G + +D
Sbjct: 434 GTQQDSSLPLP-----VNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDR 488
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL------ 323
P + + A G NH L L +G V G + +G L D V +P+
Sbjct: 489 PTPVQVVGLGGVTAIATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQASGLS 548
Query: 324 -----------SVALEKVS-------NLDG-------------------VKVIQIAAGAE 346
S+AL N DG V+ +AAG+
Sbjct: 549 NIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTWTLVPVQAVGLSSVVSLAAGSL 608
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+S + + + WG+ GQLG+G T P
Sbjct: 609 YSLALRADGTVWAWGYNASGQLGVGTTQGSAQP 641
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 150/340 (44%), Gaps = 35/340 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG GQLG G D+ SP + ++ L+ V+ +A G + LAL + G V++
Sbjct: 71 VFAWGFNRLGQLGDGTSRDKASP--VQVAGLTQVTSVAAGDQYSLALDAD-----GAVWA 123
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +SGQLG G + L P+ V+ + +++G+ H + G ++ GD
Sbjct: 124 WGDNASGQLGDGTLTSRLLPQRVSALS----NVVSLASGFAHVLALRADGTVWAWGDNRN 179
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G S P++V V + G SL L D ++ +G + GQLG
Sbjct: 180 NQLGDGTLTRSSVPLQVPGL--SGVVAVVAGGSSSLALRAD---GTLWAWGDNRYGQLG- 233
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWG-RGFNSTSD-VNCP 272
+R ++ QV ++ V + G A AL A+G ++ WG + D N
Sbjct: 234 DGTTVRRITPVQVA----SLDSVVSVSVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQ 289
Query: 273 QSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
++ P S+S + G H L + DG V G + + L SS PL +
Sbjct: 290 RTQPVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSPLPLQAGMTG 349
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
GV ++ AG HS + + +WG GQLG
Sbjct: 350 -----GVTLV---AGYRHSVALGADGTAWSWGDNVFGQLG 381
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 123/287 (42%), Gaps = 24/287 (8%)
Query: 108 EMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
++ A P+ T G R ++ G HS V G +F G GQLG G R
Sbjct: 30 DLPGAAAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRD 89
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+SPV+V+ V +A G ++SL L D V+ +G GQLG + S L
Sbjct: 90 KASPVQVAGLTQ--VTSVAAGDQYSLALDAD---GAVWAWGDNASGQLG--DGTLTSRLL 142
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSL 279
PQ L ++ V +++ AL A+G ++ WG N + + + P +P
Sbjct: 143 PQRVSALSNV--VSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLS 200
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
G + L L DG + G + +G L D V P+ VA +LD V+
Sbjct: 201 GVVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVA-----SLD--SVV 253
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
++ GA H+ + + + WG +GQLG G + P V+L D
Sbjct: 254 SVSVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSVSLTD 300
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 162/366 (44%), Gaps = 38/366 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG + GQLG G + +E L P + S V +ACG H L LT+ G
Sbjct: 1 MALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTA-----NG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++ G QLGH + +P+ + Y + I+ G HS +++ G + + G
Sbjct: 56 QVYACGNNDHHQLGH----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
D GQ+GH D P + V++ V QIACG HSL L C ++Y +GS
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL-TSC--GELYSWGSNIY 168
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGI-----SANGDRSAALSAEGHLYTWGR---- 261
GQLGV + LP L I+GI + G+ S +S ++ WG+
Sbjct: 169 GQLGVQSPK----DLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCG 224
Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G N + P L S +L G + + LT +G V G ++G L
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASN 284
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+ P V L G + Q+A G H+ A+V + ++G G GQLG NT Q
Sbjct: 285 NEMIP-----RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQ 339
Query: 377 IHPKVV 382
PKVV
Sbjct: 340 TLPKVV 345
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG D S L L+++ + + +ACGG H ++ S+V G
Sbjct: 159 ELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG- 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + GQLG + + YP + + ++ G +S F+++ G +FTCG
Sbjct: 218 ----WGKNTCGQLGLNDEQNRAYPSQLK--SMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ G +VY FG G G
Sbjct: 272 AGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPS--GGRVYSFGLGASG 329
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +++ I S +LP+V IG
Sbjct: 330 QLG-TRNTI-SQTLPKVVIG 347
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 41/269 (15%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ GD + GQLG G + P ++ + V QIACG RH+L L + QVY
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN---GQVYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+ QLG R + +P+ L ++ I+ S AL+ G + +WG
Sbjct: 60 CGNNDHHQLGHELPTKRPLPIPE----LQAYVVIQIACGSRHSMALTEWGQILSWGDNDC 115
Query: 262 ---GFNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G ++ +DV LP L F Q A G NH L LT GE+ G + +G L
Sbjct: 116 GQVGHSTDNDV---IELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 172
Query: 313 DPERVSSTR--PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
V S + P S A +++ + G+ + IA G HS +++++ A+ WG GQLGL
Sbjct: 173 ----VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGL 228
Query: 371 GNTCDQIHP-----------KVVNLGDEF 388
+ ++ +P + V GDE+
Sbjct: 229 NDEQNRAYPSQLKSMRTLGVRFVTCGDEY 257
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 161/359 (44%), Gaps = 34/359 (9%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
G GQLGH + P+ V D I +S G H+ ++D G +++ G DG
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G LG +Y P + S + + Q+ACG HSL L K ++V+ +G K GQL
Sbjct: 115 QLGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQL 169
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+ D + S PQ+ L I + ++A G S L+ G ++ WGR G N +
Sbjct: 170 GLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D P L S S G +H LT +G V G +G L P
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP--- 285
Query: 326 ALEKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 --RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYSWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEEYIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K F NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y+WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 161/359 (44%), Gaps = 34/359 (9%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
G GQLGH + P+ V D I +S G H+ ++D G +++ G DG
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G LG +Y P + S + + Q+ACG HSL L K ++V+ +G K GQL
Sbjct: 115 QLGLLGSEEYIR--VPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQL 169
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+ D + S PQ+ L I + ++A G S L+ G ++ WGR G N +
Sbjct: 170 GLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D P L S S G +H LT +G V G +G L P
Sbjct: 229 DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP--- 285
Query: 326 ALEKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 --RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYSWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEEYIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K F NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y+WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 164/353 (46%), Gaps = 37/353 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG DGQLG G P + + LS + +A G +H LAL G V++
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRVP--VPIQGLSGIVAVASGTSHSLALR-----YDGNVWA 267
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SGQLG G + P VT G I + G ++S V G ++T G T+
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVTELSG----IVSVEGGPDYSMAVRYDGTVWTWGINTY 323
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + S PV+ S V +A G H+L + + N ++ +G GQ G
Sbjct: 324 GQLGDGTTIARSVPVQTSGL--SGVVAVAAGRTHALAMRAN---NSIWAWGGNVNGQRG- 377
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D RSV TI L+ E+V ++A D S A+ ++G L+ WG G +T +
Sbjct: 378 --DESRSVYFSPRTI-LN--EVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNR 432
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + ++ A G H L + DG + G + G L D S T P+ +
Sbjct: 433 WAPAEVLGNVV--SVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM-----Q 485
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + G+ +AAG+++S + +R + WG +GQLG G T ++ P V
Sbjct: 486 VPGISGIA--SVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRV 536
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 152/353 (43%), Gaps = 35/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG DGQLG G L P + + LS V+ +A G H LAL G V++
Sbjct: 115 VWAWGRNDDGQLGDGTLSTRGDP--VQVQGLSGVTTVALGATHSLAL-----CYDGSVWA 167
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G + P+ V + ++AG NHS V G ++ G+
Sbjct: 168 WGANDHGQLGDGTSIARRTPQMVAGLQ----EVVAVAAGANHSLAVLSDGTVWAWGENYD 223
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + PV + + +A G HSL L D GN V+ +GS GQLG
Sbjct: 224 GQLGDGTTVTRRVPVPIQGL--SGIVAVASGTSHSLALRYD--GN-VWAWGSNYSGQLGD 278
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSD-VNCPQ 273
RS S QVT IV + D S A+ +G ++TWG + D +
Sbjct: 279 GSSLSRS-SPVQVT---ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIAR 334
Query: 274 SLPSSLS----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
S+P S A G H L + + + GG+ +G D R P ++ E
Sbjct: 335 SVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTILNE- 393
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V+ +AA +HS V + + WG GQLG G T ++ P V
Sbjct: 394 --------VVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEV 438
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 154/353 (43%), Gaps = 37/353 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG T GQLG G P + S LS V +A G H LA+ + +S+ ++
Sbjct: 315 VWTWGINTYGQLGDGTTIARSVP--VQTSGLSGVVAVAAGRTHALAMRANNSI-----WA 367
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +GQ G+ ++Y P T + + ++A +HS V G L+ G
Sbjct: 368 WGGNVNGQ--RGDESRSVYFSPRTILN----EVVTMAATNDHSLAVRSDGGLWAWGANNE 421
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G ++ +P +V NV +A G RHSL + D ++ +GS GQLG
Sbjct: 422 GQLGDGTTKNRWAPAEVLG----NVVSVAAGRRHSLAVRDD---GSLWAWGSNTVGQLGD 474
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R++ P G+ I ++A D S AL + L+ WG G +T +
Sbjct: 475 GTGSSRTI--PMQVPGISGI--ASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNR 530
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P + A G H+L + +G V G + G L D ++ P+ V +
Sbjct: 531 HVPTRVQGLSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLS 590
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ +AAGA HS V + + WG QLG G ++ P V
Sbjct: 591 -------GIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQV 636
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 147/350 (42%), Gaps = 34/350 (9%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
W GT G + QL LS + S+ G +A+ S G V++WGR
Sbjct: 69 WTVGTRYVSANGWYRQDWPGQLPGLSGMVSID---SGDDFSMAVRSD-----GTVWAWGR 120
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G + P V G +T ++ G HS + G ++ G GQL
Sbjct: 121 NDDGQLGDGTLSTRGDPVQVQGLSG----VTTVALGATHSLALCYDGSVWAWGANDHGQL 176
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G G + +P V+ + V +A G HSL +L D V+ +G GQLG
Sbjct: 177 GDGTSIARRTPQMVAGL--QEVVAVAAGANHSLAVLSD---GTVWAWGENYDGQLGDGTT 231
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCP 272
R V +P GL IV +++ S AL +G+++ WG ++ S+ + P
Sbjct: 232 VTRRVPVP--IQGLSG--IVAVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSSLSRSSP 287
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
+ G ++ + + DG V G + +G L D ++ + P+ + S
Sbjct: 288 VQVTELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIARSVPV-----QTSG 342
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L G V+ +AAG H+ + N +I WG +GQ G + P+ +
Sbjct: 343 LSG--VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTI 390
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 156/353 (44%), Gaps = 51/353 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WGA +GQLG G + +P + L +V +A G H LA+ G +++
Sbjct: 413 LWAWGANNEGQLGDGTTKNRWAPAEV----LGNVVSVAAGRRHSLAVRDD-----GSLWA 463
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G P V G I ++AG ++S + L+ G+ ++
Sbjct: 464 WGSNTVGQLGDGTGSSRTIPMQVPGISG----IASVAAGSDYSVALRYDRTLWAWGENSY 519
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G + P +V + IA G H L + + V+ +G GQLG
Sbjct: 520 GQLGDGTTVNRHVPTRVQGL--SGIVAIATGNGHMLAVRSN---GTVWAWGDNSSGQLGD 574
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN--- 270
+ +R V + ++ IV ++A S A+ +G L+ WG N+TS +
Sbjct: 575 GTTINRATPVQVQVLS------GIVAVAAGAAHSLAVRYDGTLWAWG--INNTSQLGDGT 626
Query: 271 -CPQSLP-------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P+ +P S+++ S A +H L + DG + G +++G L + ++ P
Sbjct: 627 GIPRLVPTQVQGIGSAVAVSAAK---HHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTP 683
Query: 323 LSVALEKVSNLDGVK----VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
KV+ L GV + G HS + + ++ WG +GQLG G
Sbjct: 684 -----SKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTG 731
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 137/342 (40%), Gaps = 39/342 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG +GQ G SP+ + L+ V +A H LA+ S G ++
Sbjct: 364 SIWAWGGNVNGQRGDESRSVYFSPRTI----LNEVVTMAATNDHSLAVRSD-----GGLW 414
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G + P V + ++AG HS V D G L+ G T
Sbjct: 415 AWGANNEGQLGDGTTKNRWAPAEVLG------NVVSVAAGRRHSLAVRDDGSLWAWGSNT 468
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S + P++V + +A G +S+ L D ++ +G GQLG
Sbjct: 469 VGQLGDGTGSSRTIPMQVPGI--SGIASVAAGSDYSVALRYD---RTLWAWGENSYGQLG 523
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R V P GL IV I+ A+ + G ++ WG G +T +
Sbjct: 524 DGTTVNRHV--PTRVQGLSG--IVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTIN 579
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + A G H L + DG + G ++ L D + P V
Sbjct: 580 RATPVQVQVLSGIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQV--- 636
Query: 329 KVSNLDGV-KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
G+ + ++A HS V + + WG +GQLG
Sbjct: 637 -----QGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLG 673
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG + GQLG G + P + LS + +A G H+LA+ S G V++
Sbjct: 511 LWAWGENSYGQLGDGTTVNRHVPT--RVQGLSGIVAIATGNGHMLAVRS-----NGTVWA 563
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SSGQLG G ++ P V G + HS V G L+ G
Sbjct: 564 WGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGAA----HSLAVRYDGTLWAWGINNT 619
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P +V + ++ HSL +L D ++ +G+ GQLG
Sbjct: 620 SQLGDGTGIPRLVPTQVQGI--GSAVAVSAAKHHSLAVLAD---GTLWDWGANNYGQLGR 674
Query: 216 SKDRIRSVSLPQVTI-GLHD-IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
++D T+ G+ + + G S S AL ++G+L WG P+
Sbjct: 675 NQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPE 734
Query: 274 SLP 276
++P
Sbjct: 735 NIP 737
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 240 ISANGDRSAALSAEGHLYTWGRGF---NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
I+A+ S A+ ++G ++T G + N + P LP G + + +
Sbjct: 52 IAASSMNSLAIRSDGTVWTVGTRYVSANGWYRQDWPGQLPGLSGMVSIDSGDDFSMAVRS 111
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG V G + G L D + P+ +V L GV + A GA HS + + +
Sbjct: 112 DGTVWAWGRNDDGQLGDGTLSTRGDPV-----QVQGLSGVTTV--ALGATHSLALCYDGS 164
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ WG +HGQLG G + + P++V
Sbjct: 165 VWAWGANDHGQLGDGTSIARRTPQMV 190
>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Strongylocentrotus purpuratus]
Length = 539
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 180/408 (44%), Gaps = 57/408 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+WGA + GQLG G D L P+ NL + V + GG H + LT G +
Sbjct: 153 AWGANSYGQLGLGHQKDHLLPE--NLKTFPEDVKTIVGGGGHTVFLTG-----NGDLHVC 205
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + GQLG G D K V D + I+ GWNH+ ++++ L G T G
Sbjct: 206 GSNNKGQLGLGHTSD--INKLVRVPD--LRPLKKIACGWNHTVAITENDELLCWGSNTHG 261
Query: 157 QLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QL H + + +++S I+ G+RH+L + D Q++ +G+GK+GQLG
Sbjct: 262 QLTHKESIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTD---GQLWTWGAGKKGQLGW 318
Query: 216 SKDRIR-------SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ ++R V +P V D++ V ++A SAALS G LY WG
Sbjct: 319 TDSKMRVPHQWNKPVHIP-VKEDDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLA 377
Query: 264 --NSTSDVNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
S++ ++ P+ L +L + GW H+L +T D V G + +G L P
Sbjct: 378 QPKSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAK 437
Query: 318 S----STRPLSVALEKVSNLDGVKVI----------QIAAGAEHSAVVTENRAIMTWGWG 363
S S S A + D V QI GAEHS +T++ ++ WGW
Sbjct: 438 SIPNGSAESESNATPTTTTPDCCHVPTEISILKNAKQIVCGAEHSLAITKDDKLLAWGWN 497
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL--EVFCGSGFTYAISR 409
EHG G + PK + Q D Q+ +V G+G +A +
Sbjct: 498 EHGMCADGTKTNVFLPK------QVQGLDGQVASKVGVGAGHCFAFCQ 539
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 148/361 (40%), Gaps = 63/361 (17%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
G+ GQLG G D +L+ + L + + CG H +A+T G + RG
Sbjct: 47 GSNNKGQLGLGHTSD--INKLVRVPDLRPLKQIVCGWNHTVAITGTD----GSLELLHRG 100
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL---------FTC 150
++G L P P ++ + AG +H V + L
Sbjct: 101 QFNEVGR-----ELIPVPECSWEETLPVAVRVGAG-SHESCVGVADVLNGVYTLFAYLAW 154
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G ++GQLG G + H P + +F ++V I G H++ L + ++ GS +
Sbjct: 155 GANSYGQLGLGHQKDHLLPENLKTF-PEDVKTIVGGGGHTVFLTGN---GDLHVCGSNNK 210
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG+ + D + V +P + + I+ + + A++ L WG +
Sbjct: 211 GQLGLGHTSDINKLVRVPDLR------PLKKIACGWNHTVAITENDELLCWGSNTHGQLT 264
Query: 265 ------------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML- 311
S V+CP+ F+ + G H L ++ DG++ G G L
Sbjct: 265 HKESIVTKPRQIELSGVDCPR-------FAAISGGLRHTLAVSTDGQLWTWGAGKKGQLG 317
Query: 312 --SDPERVSS--TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
RV +P+ + + K ++D VK +Q+AAGA HSA +++ + WG + Q
Sbjct: 318 WTDSKMRVPHQWNKPVHIPV-KEDDVD-VKFVQVAAGAYHSAALSDMGILYIWGCNKWSQ 375
Query: 368 L 368
L
Sbjct: 376 L 376
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 46/230 (20%)
Query: 35 KVWSWGAGTDGQLG----TGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPS 86
++W+WGAG GQLG R+ + + + V + +A G H AL+
Sbjct: 304 QLWTWGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDM- 362
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPV--TFFDGHRYTITHISAGWNHSGFVSD 143
G ++ WG QL + + + PK + FDG TI I +GW H +++
Sbjct: 363 ----GILYIWGCNKWSQLAQPKSSNPISTPKRLDPALFDG--LTIKGIHSGWTHMLAITE 416
Query: 144 SGCLFTCGDGTFGQLG--------HGDYRSHSS-------------PVKVSSFVNKNVHQ 182
++T G +GQLG +G S S+ P ++S + KN Q
Sbjct: 417 DESVYTWGRNDYGQLGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEIS--ILKNAKQ 474
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
I CG HSL + KD +++ +G + G + +V LP+ GL
Sbjct: 475 IVCGAEHSLAITKD---DKLLAWGWNEHGM--CADGTKTNVFLPKQVQGL 519
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN 289
++ I G + L+ G L+ G G TSD+N +P Q GWN
Sbjct: 23 DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKQIVCGWN 82
Query: 290 HVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H + +TG DG + +L H G ++ R P E + +++ AG+ S
Sbjct: 83 HTVAITGTDGSLELL---HRGQFNEVGRELIPVPECSWEETLP-----VAVRVGAGSHES 134
Query: 349 AV--------VTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
V V A + WG +GQLGLG+ D + P+
Sbjct: 135 CVGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHLLPE 174
>gi|417401058|gb|JAA47434.1| Putative alpha-tubulin suppressor [Desmodus rotundus]
Length = 445
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 179/400 (44%), Gaps = 41/400 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D LSPQ LN + + GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSPQQLNDFCKPMCIRRITGGGGHSAVVTD-----GGSLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G G+LG G D L P G + ++ GW+ + +++SG + +CG +
Sbjct: 72 VCGLNKDGRLGLGHTEDVLCFTPCRSLLG--CPVQQVACGWDFTVILTESGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG RS + + + V IA G+RH+L + Q +G G SG+
Sbjct: 130 FGQLGVPHGPRRSVVP--QAIELLREKVVGIAAGLRHALAATASGIVFQ-WGTGLASSGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
R G + + P GL + + + A + SA+L+ G LY WG +
Sbjct: 187 RLCPGQTLPLFLTAKEPSRVTGLENSRAICVVAGSEHSASLTDAGELYVWGSNKHGQLAS 246
Query: 265 STSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLS-------- 312
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 247 QAAFLPVPQGIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKPESPEG 306
Query: 313 -DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+PE+ S P S + S+L + +++ G+EH+ V A +WGW EHG G
Sbjct: 307 WNPEKQGSPFPCSRPQKNTPSSLHCLTGATEVSCGSEHNLAVVGG-ACCSWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G+ + PK+V + + L V CG+G + A +
Sbjct: 366 DGSEANIWAPKLV----QALRSSSVLLVGCGAGHSLAFCQ 401
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L + SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ S S+ +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-- 383
+V L G +V QIA G +H+ A+V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 384 ----------LGDEFQNRDTQLEVFCGSGFTYAI 407
D F+ R + ++F G T+ +
Sbjct: 345 WAAHSGQLSARADRFKYRVVK-QIFSGGDQTFVL 377
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH + D + P+ V G +T I+ G H+ V SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 KGQLGTG----HTCNVKCPSPVK 342
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 160/347 (46%), Gaps = 35/347 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG T GQLG G D P + ++ LS V +A GG H LA+ S G V+
Sbjct: 168 SVWAWGRNTSGQLGDGTRDDRAVP--VQVTGLSGVVSVAAGGNHSLAVRSD-----GSVW 220
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG +A YP P D + ++AG HS V G ++ GD
Sbjct: 221 AWGNNASGQLGGAP--EAAYPVPWRVED--VSGVVAVAAGQYHSLAVRYDGTVWAWGDNL 276
Query: 155 FGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG G +S P +V V ++ G HSLV+ D V+ +G+ GQ
Sbjct: 277 YGQLGDGKLEGNSRWLPKQVPGL--GGVVAVSAGFYHSLVVRSD---GTVWAWGNNAYGQ 331
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG R + S QV L V ++A S ++++G L+ WG RG +
Sbjct: 332 LG-GGSRAHAASPVQV---LGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTL 387
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ P +P A G HVL L DG V G + G L D R S P
Sbjct: 388 TRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWVP---- 443
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+V L GV + +AAG+ S V + ++ +WG +GQLG G+T
Sbjct: 444 -RQVPELSGV--VAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGST 487
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 161/355 (45%), Gaps = 40/355 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG+ DGQ G G L +P + LS V +A GG HVLAL S G V++
Sbjct: 371 LWAWGSNLDGQRGDGTLTRYPTPG--RVPGLSGVVSVAAGGGHVLALLSD-----GTVWA 423
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +SGQLG G P+ V G + ++AG + S V G +++ GD +
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQVPELSG----VVAVAAGSSFSLAVRYDGSVWSWGDNAY 479
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLGHG + S P+ V V +A G H+L + D V+G+G GQLG
Sbjct: 480 GQLGHGSTDASSVPLHVREL--SEVVAVAAGSMHALAVRAD---GTVWGWGFNDYGQLGD 534
Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
+S R V +P ++ +V ++A+ S A+ A+G ++ WG G
Sbjct: 535 GFEGISARRYSPVQVPGLS------GMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDG 588
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+T+ P + + + + + G+N+ + + DG + G + G L D S P+
Sbjct: 589 TTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVR 648
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V V+ +AAG HS V + + WG+ GQLG G P
Sbjct: 649 VQGP-------VRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALP 696
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 157/378 (41%), Gaps = 37/378 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG + P + ++ LS V + G H LA+ S G V++
Sbjct: 119 VWAWGNNAYGQLGDDTRDNRTVP--VQVTGLSGVVSVVAGDTHSLAVRSD-----GSVWA 171
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR +SGQLG G D P VT G + ++AG NHS V G ++ G+
Sbjct: 172 WGRNTSGQLGDGTRDDRAVPVQVTGLSG----VVSVAAGGNHSLAVRSDGSVWAWGNNAS 227
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG ++ P +V V +A G HSL + D V+ +G GQLG
Sbjct: 228 GQLGGAPEAAYPVPWRVEDV--SGVVAVAAGQYHSLAVRYD---GTVWAWGDNLYGQLGD 282
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
K S LP+ GL +V +SA S + ++G ++ WG G S +
Sbjct: 283 GKLEGNSRWLPKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHA 340
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + A G+ H LV+ DG + G + G D P +
Sbjct: 341 ASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTP-----GR 395
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
V L G V+ +AAG H + + + WG GQLG G + P+ +
Sbjct: 396 VPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWVPR------QVP 447
Query: 390 NRDTQLEVFCGSGFTYAI 407
+ V GS F+ A+
Sbjct: 448 ELSGVVAVAAGSSFSLAV 465
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 150/357 (42%), Gaps = 34/357 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G+L + L V ++ G H L + S G V++
Sbjct: 269 VWAWGDNLYGQLGDGKLEGNSRWLPKQVPGLGGVVAVSAGFYHSLVVRSD-----GTVWA 323
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G A P V G ++AG+ HS V+ G L+ G
Sbjct: 324 WGNNAYGQLGGGSRAHAASPVQVLGVSG----AVAVAAGYRHSLVVNSDGTLWAWGSNLD 379
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQ G G + +P +V V +A G H L LL D V+ +G GQLG
Sbjct: 380 GQRGDGTLTRYPTPGRVPGL--SGVVSVAAGGGHVLALLSD---GTVWAWGDNASGQLGD 434
Query: 216 SKDRIRSV--SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
R V +P+++ +V ++A S A+ +G +++WG G ST
Sbjct: 435 GTRHSRWVPRQVPELS------GVVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTD 488
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP-ERVSSTRPLSVA 326
+ P + A G H L + DG V G + +G L D E +S+ R V
Sbjct: 489 ASSVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQ 548
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +S + + +AA HS V + + WG +LG G T ++ P VN
Sbjct: 549 VPGLSGM-----VSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVN 600
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 147/356 (41%), Gaps = 37/356 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+ G GQLG G +P + + LS V+ +A G H LAL G V++
Sbjct: 69 VWTTGGNGHGQLGDGTTLSRRTP--VQVQGLSGVAAVAAGHGHSLALR-----YDGTVWA 121
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG + P VT G + + AG HS V G ++ G T
Sbjct: 122 WGNNAYGQLGDDTRDNRTVPVQVTGLSG----VVSVVAGDTHSLAVRSDGSVWAWGRNTS 177
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + PV+V+ V +A G HSL + D V+ +G+ GQLG
Sbjct: 178 GQLGDGTRDDRAVPVQVTGL--SGVVSVAAGGNHSLAVRSD---GSVWAWGNNASGQLGG 232
Query: 216 SKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVN--- 270
+ + V + D+ +V ++A S A+ +G ++ WG + D
Sbjct: 233 APEAAYPVPWR-----VEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEG 287
Query: 271 ----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P+ +P + G+ H LV+ DG V G + +G L R + P+ V
Sbjct: 288 NSRWLPKQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQV- 346
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L + +AAG HS VV + + WG GQ G G P V
Sbjct: 347 ------LGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRV 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 141/356 (39%), Gaps = 42/356 (11%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G R H Q+L +S +V A G H L + S G ++
Sbjct: 321 VWAWGNNAYGQLGGGSRAHAASPVQVLGVSGAVAV---AAGYRHSLVVNSD-----GTLW 372
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQ G G + P V G + ++AG H + G ++ GD
Sbjct: 373 AWGSNLDGQRGDGTLTRYPTPGRVPGLSG----VVSVAAGGGHVLALLSDGTVWAWGDNA 428
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S P +V V +A G SL + D V+ +G GQLG
Sbjct: 429 SGQLGDGTRHSRWVPRQVPEL--SGVVAVAAGSSFSLAVRYD---GSVWSWGDNAYGQLG 483
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN---- 270
SV L + E+V ++A + A+ A+G + WG GFN +
Sbjct: 484 HGSTDASSVPLHVRELS----EVVAVAAGSMHALAVRADGTV--WGWGFNDYGQLGDGFE 537
Query: 271 -------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
P +P A + H L + DG V G + L D PL
Sbjct: 538 GISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPL 597
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V N G V ++AG +S + + ++ WG GQLG G+T + P
Sbjct: 598 RV------NAPG-TVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVP 646
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 24/295 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++ G GQLG G + P V G + ++AG HS + G ++
Sbjct: 67 GTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSG----VAAVAAGHGHSLALRYDGTVWAW 122
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+ +GQLG + + PV+V+ V + G HSL + D V+ +G
Sbjct: 123 GNNAYGQLGDDTRDNRTVPVQVTGL--SGVVSVVAGDTHSLAVRSD---GSVWAWGRNTS 177
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG R+V + QVT GL +V ++A G+ S A+ ++G ++ WG G
Sbjct: 178 GQLGDGTRDDRAVPV-QVT-GLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGA 233
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ P + A G H L + DG V G + +G L D + ++R L
Sbjct: 234 PEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLP 293
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
++V L G V+ ++AG HS VV + + WG +GQLG G+ P
Sbjct: 294 ---KQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASP 343
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 107/243 (44%), Gaps = 24/243 (9%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS V G ++T G GQLG G S +PV+V V +A G HSL L D
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGL--SGVAAVAAGHGHSLALRYD 116
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ +G+ GQLG R+V + QVT GL +V + A S A+ ++G +
Sbjct: 117 ---GTVWAWGNNAYGQLGDDTRDNRTVPV-QVT-GLSG--VVSVVAGDTHSLAVRSDGSV 169
Query: 257 YTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
+ WGR G + D P + A G NH L + DG V G + G
Sbjct: 170 WAWGRNTSGQLGDGTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQ 229
Query: 311 LSD-PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L PE + P+ +E VS V+ +AAG HS V + + WG +GQLG
Sbjct: 230 LGGAPE---AAYPVPWRVEDVSG-----VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLG 281
Query: 370 LGN 372
G
Sbjct: 282 DGK 284
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 36 VWSWGAGTDGQLGTGR---LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
VW WG GQLG G SP + + LS + +A H LA+ + G
Sbjct: 521 VWGWGFNDYGQLGDGFEGISARRYSP--VQVPGLSGMVSVAADFGHSLAVRAD-----GT 573
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG + +LG G L P V T+ +SAG+N+S + G L+ G
Sbjct: 574 VWAWGNNTDSELGDGTTTRRLVPLRVNAPG----TVALLSAGYNYSMAMRADGSLWAWGT 629
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G S + PV+V V + +A G HS+ + D ++ +G GQ
Sbjct: 630 NFAGQLGDGSTTSRAVPVRVQGPVRAST--LAAGQSHSMAVGSDGF---LWAWGFNFEGQ 684
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG + +LP G+ + V ++ N S A+ ++G L+ WG
Sbjct: 685 LG--DGTLTHHALPVRVPGMSGVVAVDVTLN--LSLAVRSDGSLWAWG 728
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L + SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ S S+ +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-- 383
+V L G +V QIA G +H+ A+V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 384 ----------LGDEFQNRDTQLEVFCGSGFTYAI 407
D F+ R + ++F G T+ +
Sbjct: 345 WAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH + D + P+ V G +T I+ G H+ V SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
GQLG G + +HSS + + F + V QI G + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R I + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--IRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 165/387 (42%), Gaps = 48/387 (12%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP------- 338
Query: 387 EFQNRDTQLEVFCGSGFTYAISRHCLP 413
F G YA + CLP
Sbjct: 339 -----------FTVKGNWYAYNGQCLP 354
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
niloticus]
Length = 4833
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 20/261 (7%)
Query: 56 LSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
L+P L+++ S + LA G H LAL+S G+VFSWG G G+LGHG+
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHYLALSS-----NGEVFSWGCGDGGRLGHGDTTYLE 527
Query: 114 YPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
PK + F+G + + H++ G +S ++ G L+T G G +G+LGHG ++P+
Sbjct: 528 EPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMV 587
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
V++F V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEK 644
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQ 283
L D++IV + S AL+ +G +YTWG+G N + V P+ L S
Sbjct: 645 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD 704
Query: 284 AALGWNHVLVLTGDGEVLMLG 304
A+G H L LT DGEVL G
Sbjct: 705 VAVGSTHCLALTDDGEVLSWG 725
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPSSVIG 90
K+++ G T+G+LG G L P +++LS+ + + GG H +ALT +
Sbjct: 3009 KIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALT-----VD 3062
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++
Sbjct: 3063 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 3120
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R + L L ++ V+ +G G
Sbjct: 3121 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTL---ALTDEGFVFSWGDG 3177
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3178 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3235
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3236 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3295
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3296 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3322
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4046 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 4098
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG LFT G G +G+LGHGD P V + V +ACG +L
Sbjct: 4099 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 4158
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4159 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTK 4213
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4214 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4235
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4236 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4284
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4285 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4316
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G++F
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 4112
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V GHR +G + ++D +++ GDG
Sbjct: 4113 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4172
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4173 YGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4229
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4230 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4273
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 176/411 (42%), Gaps = 29/411 (7%)
Query: 7 EETEKGKSALINNAKPKIEEEEEEQQV-VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS 65
EE + K+A + A+ K E + KV+ WG QLG + P S
Sbjct: 2928 EEEDDEKTAAGSLARKKPSGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLS 2987
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGH 124
+V +A G + A+T + GK+++ G ++G+LG G + P+ +T +
Sbjct: 2988 ALNVVQVAGGSKSLFAVT-----VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNY 3042
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+ +G H+ ++ G +F+ G+G G+LGH + P + + K + IA
Sbjct: 3043 VIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3102
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISAN 243
CG HS + ++Y +G G+ G+LG + + L +V +G H + V +
Sbjct: 3103 CGSSHSAAITS---SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLG-HRVIQVACGSR 3158
Query: 244 GDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLT 295
++ AL+ EG +++WG G + N PQ++ + Q G L LT
Sbjct: 3159 DAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3218
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G V G + L V +P + V L G K++ +A GA H VT+
Sbjct: 3219 KSGVVWTWGKGDYFRLGHGTDVHVRKP-----QMVEGLRGKKIVHVAVGALHCLAVTDTG 3273
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ WG +HGQ G G T P +V G E Q V CGS + A
Sbjct: 3274 QVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQK---ITRVACGSSHSVA 3320
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 125/252 (49%), Gaps = 20/252 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P+++ + V +ACG + A+T+
Sbjct: 506 EVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITA-----D 560
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P VT F G + +G + V+++G +++
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSW 620
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P V + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 677
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
+LG D V P++ L ++V ++ AL+ +G + +WG F++
Sbjct: 678 QRLGHGTD--EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDT 735
Query: 266 T-SDVNCPQSLP 276
S+ P++LP
Sbjct: 736 LFSNKKQPKALP 747
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3953 IYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4008
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4009 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4068
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L GV+V+ IAAG HSA +T + + TWG G +G+LG
Sbjct: 4069 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG 4123
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V D Q ++V CGSG
Sbjct: 4124 HGDSEDQLKPKLV---DALQGHRV-IDVACGSG 4152
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 44/273 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G LG Y + + P++ + + V QI C + L+L SG
Sbjct: 419 WGLLGWKLYANVNGPIQCKALSSLGVTQIVCSEKGFLIL-----------SSSG-----A 462
Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFNS 265
V +S +L P + L +IV ++A +G ALS+ G +++WG G
Sbjct: 463 VYSQNYKSTTLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD 522
Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T+ + P+ + + + QA A G + +T DGE+ G ++G L
Sbjct: 523 TTYLEEPKMI-GTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSED 581
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
T P+ V K G+KV+ +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 582 QTTPMVVTAFK-----GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 636
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK+V ++ Q+ D ++V CGS F+ A+++
Sbjct: 637 KTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 665
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 237 IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGW 288
+V ++ SAA++A+G LYTWGRG S+ D P + + L A G
Sbjct: 544 VVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGS 603
Query: 289 N--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
L +T +G+V G +G L P V EK+ +LD ++++ G++
Sbjct: 604 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLD---IVKVCCGSQ 658
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
S +T++ + TWG G++ +LG G +PK++ D Q + ++V GS A
Sbjct: 659 FSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL---DSLQGKKV-VDVAVGSTHCLA 714
Query: 407 IS 408
++
Sbjct: 715 LT 716
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 220 IRSVSLPQ---VTIGLHDIEIVGISANGDRSAALSAEGH-------------LYTWGR-G 262
+R ++LPQ + I L +V I A+ DR A+ + H + WG G
Sbjct: 365 LRYLTLPQDNDLAIDLRQTAVV-IMAHLDRLASPCSPPHCNSPTSHKGTLQEVIAWGLLG 423
Query: 263 FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ ++VN P SSL +Q L+L+ G V S + ++
Sbjct: 424 WKLYANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVY----------SQNYKSTTL 473
Query: 321 RPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ + + L K++++AA +H ++ N + +WG G+ G+LG G+T
Sbjct: 474 APMLIHV-----LSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEE 528
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
PK++ + Q + V CGS ++ AI+
Sbjct: 529 PKMIGTFNGKQAGKHVVHVACGSTYSAAIT 558
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4268 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 4326
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 23/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+F WG +G+LG G + + L PK F G + +S G H+ FV G ++TC
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPF--GATKAMREVSCGRQHTVFVLAEGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLG + H P +++ +++ Q++CG H+LV+ QV+ +G
Sbjct: 59 GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDK---YQVFSWGYDDC 113
Query: 211 GQLGVSKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG + + + S P++ L ++IV ++ G S ALS +G +++WG G
Sbjct: 114 GQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI 173
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
ST + PQ L S + F Q G +H VL+ G V G + G L +
Sbjct: 174 GSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY 233
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V +L +KV I+ G EH+AV+T + ++T+G G +GQLG + + P+
Sbjct: 234 P-----THVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRK 288
Query: 382 V 382
V
Sbjct: 289 V 289
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 160/362 (44%), Gaps = 33/362 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WGA +G+LG G + ++ L+P+ + ++ ++CG H + + + G V
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAE-----GTV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G GQLG D + +P +I +S G H+ V+D +F+ G
Sbjct: 56 YTCGSNDYGQLGQ----DKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYD 111
Query: 154 TFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GQLGH + P V + + Q+ACG +HSL L D +++ +G+
Sbjct: 112 DCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSND---GRIFSWGNNSH 168
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG+ ++ PQ L I I A G S LS G ++ +GR G
Sbjct: 169 GQLGIGS--TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG 226
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
T D P + S SL + + G H VLT DG VL G +G L P
Sbjct: 227 DTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALP 286
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKV 381
KV L G++V Q+A G H+ E+ I ++G G +GQLG T + P
Sbjct: 287 -----RKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPIT 341
Query: 382 VN 383
V+
Sbjct: 342 VD 343
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)
Query: 35 KVWSWGAGTDGQLGTGRL---HDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V+SWG GQLG ++ P+++ LSSL V +ACGG H LAL++
Sbjct: 104 QVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQ-VACGGKHSLALSN-----D 157
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++FSWG S GQLG G + P+ +T G + I AG +HS +S SG +F
Sbjct: 158 GRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPF--CQIVAGGSHSFVLSKSGAVFGF 215
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G TFGQLG GD P V S + V I+CG H+ VL L V FG+G
Sbjct: 216 GRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL---TLDGGVLTFGAGSY 272
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFN----- 264
GQLG + + +LP+ L +E+ ++ + A + + G +Y++G G N
Sbjct: 273 GQLGHNSNNHE--ALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGS 330
Query: 265 -STSDVNCP 272
T++ N P
Sbjct: 331 KGTTNCNTP 339
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 39/264 (14%)
Query: 18 NNAKPKIEEEEEEQQVV----------------KVWSWGAGTDGQLGTGRLHDELSPQLL 61
N+ +P++ +E Q+V +++SWG + GQLG G ++ PQ
Sbjct: 126 NSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQ-- 183
Query: 62 NLSSLSSVSM--LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
L+SL+ + + GG+H L+ G VF +GR + GQLG G+ D YP V
Sbjct: 184 ELTSLTGIPFCQIVAGGSHSFVLSK-----SGAVFGFGRNTFGQLGLGDTGDRKYPTHVK 238
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
+ +THIS G H+ ++ G + T G G++GQLGH + P KV +
Sbjct: 239 SLRSLK--VTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLE 296
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTI-GLHD 234
V Q+ACG H++ ++ ++Y FG G GQLG + + +V P V G +
Sbjct: 297 VTQLACGRMHTMAYVES--SGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNS 354
Query: 235 IE-----IVGISANGDRSAALSAE 253
+E + I+A GD++ AL+++
Sbjct: 355 LEEQCYVVQAITAGGDQAFALASK 378
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 158/359 (44%), Gaps = 26/359 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG GQLG G D +P ++L + ++++ +A A+ ALTS G V
Sbjct: 55 TVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTS-----TGAVL 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + G+LG G D P V G T+T I+ G H+ ++ +G L G
Sbjct: 110 AWGNNTGGELGDGTNTDRTTPVAVKLPTG--TTVTAIAVGTFHTLALTSTGALLAWGGNG 167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FG+LG G + + PV V+ + IA G HSL L V +G GQLG
Sbjct: 168 FGELGDGTTTARNEPVPVNVPAGTTITAIAGGRGHSLALTST---GTVLAWGKNNEGQLG 224
Query: 215 VSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
D + S V + L + I+ G S AL++ G + WG G +T+
Sbjct: 225 ---DGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGTTT 281
Query: 268 DVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D + P LP + + A G H + LT G VL G + G L D ST P+ V
Sbjct: 282 DRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDV 341
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L + + + A HS +T I+ WG G+LG G T ++ P VNL
Sbjct: 342 NLPPDTTITAIT----AHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRSTPVDVNL 396
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 129/310 (41%), Gaps = 22/310 (7%)
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
SPS V V +WG GQLG G +D+ P V G TIT I+ +S ++
Sbjct: 47 SPSGVASDTVLTWGENDFGQLGDGTTIDSSTPVDVDLPAG--TTITAIAGSDANSFALTS 104
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G + G+ T G+LG G ++PV V V IA G H+L L +
Sbjct: 105 TGAVLAWGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTST---GALL 161
Query: 204 GFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
+G G+LG R+ +P V G I I+ S AL++ G + WG+
Sbjct: 162 AWGGNGFGELGDGTTTARNEPVPVNVPAG---TTITAIAGGRGHSLALTSTGTVLAWGKN 218
Query: 262 -------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G N+ S LP + + A G ++ LT G VL G + G + D
Sbjct: 219 NEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDG 278
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+ P+ V L G V IA G HS +T ++ WG GQLG G T
Sbjct: 279 TTTDRSTPVDVDLPP-----GTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTT 333
Query: 375 DQIHPKVVNL 384
D P VNL
Sbjct: 334 DSTTPVDVNL 343
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG + GQ+G G D +P ++L ++V+ +A G H +ALTS G V
Sbjct: 263 TVLAWGLNSSGQVGDGTTTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTS-----AGTVL 317
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GWNHSGFVSDSGCLFTCGDG 153
+WG SSGQLG G D+ P V TIT I+A +HS ++ +G + G
Sbjct: 318 AWGLNSSGQLGDGTTTDSTTPVDVNLP--PDTTITAITAHDGSHSLALTSTGTILAWGLN 375
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
+ G+LG G + S+PV V+ V I G HS+ L
Sbjct: 376 SSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDDHSMAL 415
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 149/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D C L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 GV 215
G
Sbjct: 328 GT 329
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 175/408 (42%), Gaps = 70/408 (17%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G G+LG G L + P + + S+ +ACGGAH L LT G V++ G
Sbjct: 38 WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTES-----GCVYAAGL 92
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQL G VD Y I HI+AG+ HS ++ G L+ G + GQL
Sbjct: 93 NDFGQL--GVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQL 150
Query: 159 GHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
G G ++ S P KV ++ +A G HS+ + +G+G G+LG
Sbjct: 151 GLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQ---GEALSWGAGGSGRLGHG 207
Query: 217 KD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
+ R S P++ L I++ ++A SA + G ++ +G GF
Sbjct: 208 HESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGF 267
Query: 264 NSTSDVNCPQSLPSSLSFS-QAALGWNHVLVLTGDGEVLMLGGSHHGMLS--------DP 314
+ P S+ S L +S Q A G H V++ GE+ G + +G L P
Sbjct: 268 REAKNATAP-SMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFP 326
Query: 315 ERVS---STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG-------- 363
ER+ S P+S Q++ G +H+A ++E + TWGWG
Sbjct: 327 ERIEGPFSKNPVS---------------QVSCGWKHTAAISEGN-VFTWGWGGSYGTFSD 370
Query: 364 ----EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLG G+ D I PK+V EF+ L+V CG T AI
Sbjct: 371 DGHSSGGQLGQGSDVDHIKPKMV----EFEESVRALQVSCGFNHTGAI 414
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 34/332 (10%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LG G + P + FD H ++ I+ G H+ F+++SGC++ G F
Sbjct: 38 WGNGDFGRLGLGSLESQWRPAVCSAFDHH--SLVAIACGGAHTLFLTESGCVYAAGLNDF 95
Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG D + P++VS+ K +H IA G HS + D ++Y +G GQLG
Sbjct: 96 GQLGVSVDKNYTTEPLEVSALPKKIIH-IAAGYYHSAAITAD---GELYMWGKNSNGQLG 151
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------------- 261
+ K +VS+P L+ I I ++ + S A + +G +WG
Sbjct: 152 LGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGRLGHGHESS 211
Query: 262 --GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
GF TS P+ + + A G H + +G V + G E
Sbjct: 212 LLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERAMDKFGFREAK 271
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
++T P +S L K Q+A G H+ V++ + + TWG E+G LG+G + I
Sbjct: 272 NATAP-----SMISELPYSK--QVACGGYHTCVISSSGELFTWGSNENGCLGMGFM-ETI 323
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
H G +N +Q V CG T AIS
Sbjct: 324 HFPERIEGPFSKNPVSQ--VSCGWKHTAAISE 353
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 25/239 (10%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG ++GQLG G + + +S P + + S+ M+A G H +A T G+
Sbjct: 138 ELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQ-----GE 192
Query: 93 VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
SWG G SG+LGHG L P+ + +G + + +++AG HS + +
Sbjct: 193 ALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIK--VKNVAAGLLHSACIDE 250
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G +F G+ + G + ++ ++P +S Q+ACG H+ V+ +++
Sbjct: 251 NGSVFIFGERAMDKFGFREAKNATAPSMISELPYSK--QVACGGYHTCVISSS---GELF 305
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+GS + G LG+ + ++ P+ G V + G + A +EG+++TWG G
Sbjct: 306 TWGSNENGCLGMG--FMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFTWGWG 362
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ +G + G + +P ++ S L +ACGG H ++S G++F+
Sbjct: 254 VFIFGERAMDKFGFREAKNATAPSMI--SELPYSKQVACGGYHTCVISSS-----GELFT 306
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCG-- 151
WG +G LG G M +P+ + +G + ++ +S GW H+ +S+ G +FT G
Sbjct: 307 WGSNENGCLGMGFMETIHFPERI---EGPFSKNPVSQVSCGWKHTAAISE-GNVFTWGWG 362
Query: 152 --DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
GTF GQLG G H P V + Q++CG H+ +L+
Sbjct: 363 GSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAILE 416
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 151/326 (46%), Gaps = 29/326 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
+V++ G GT+G+LG G ++ P L + V +A GG H LALT + GK
Sbjct: 3127 RVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT-----LDGK 3181
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3182 VFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3239
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3240 GEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3296
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G+LG + P L I ++ I S AL+ G ++TWG+ G
Sbjct: 3297 GKLG--RGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3354
Query: 265 STSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
V PQ + A+G H L +T G+V G + HG + +P
Sbjct: 3355 GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKP 3414
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
AL V LD V V ++A G+ HS
Sbjct: 3415 ---AL--VIGLDDVFVNRVACGSSHS 3435
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 142/336 (42%), Gaps = 67/336 (19%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG V PK V H ++ I+ G
Sbjct: 4319 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHL--HGMSVADIACG 4371
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4431
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + ++ + S AL+
Sbjct: 4432 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTK 4486
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4487 SGAVYTWGKG----------------------------------DFHRLGHGSVDH---- 4508
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +KV+ L G K+I IA G+ H +++ + TWG + GQLG G
Sbjct: 4509 ------VRRP-----KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT 4557
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V+ Q + ++V CGS T A+S
Sbjct: 4558 VTAIQRPRLVS---ALQGKHI-VKVTCGSAHTLALS 4589
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ SV+ +ACG AH A+T+ G+V
Sbjct: 4331 EVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITA-----SGQVL 4385
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4386 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4445
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4446 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKS---GAVYTWGKGDFHRLG 4502
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4503 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4546
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 152/330 (46%), Gaps = 32/330 (9%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS--AGWNHSGFVSDSGCLF 148
G+VF+ G G++G+LG G + P + H+Y + ++ +G H+ ++ G +F
Sbjct: 3126 GRVFACGEGTNGRLGLGVTYNVPLPHQLPVL--HQYVVKKVAVHSGGKHALALTLDGKVF 3183
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ G+G G+LGHG+ + P +V + K + +ACG HS + ++Y +G G
Sbjct: 3184 SWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQ---GELYTWGLG 3240
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW------ 259
+ G+LG + + P++ L +V + A G R A AL+ +G +++W
Sbjct: 3241 EYGRLGHGDNATQLK--PKLVAALAGRRVVQV-ACGSRDAQTLALTEDGAVFSWGDGDFG 3297
Query: 260 --GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
GRG + SD S + Q G L LT GEV G + L
Sbjct: 3298 KLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3357
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+P + + L G +VI +A GA H VT++ + WG +HGQ G GNT
Sbjct: 3358 HVRKP-----QPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNK 3412
Query: 378 HPK-VVNLGDEFQNRDTQLEVFCGSGFTYA 406
P V+ L D F NR V CGS + A
Sbjct: 3413 KPALVIGLDDVFVNR-----VACGSSHSIA 3437
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 17/244 (6%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWGAG D +LG G H P + V + CG + +T GG + +W
Sbjct: 653 YSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVIT-----CGGNLLTW 707
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G +F GDG +G
Sbjct: 708 GRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 767
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G+ P+ V S V +I G ++S+ L + QVY +G +
Sbjct: 768 KLGNGNCNGSLQPILVESL--PRVQRIFAGSQYSVALSSE---GQVYTWGKATCLGHQLV 822
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ ALS+ G ++ WGR +C Q P
Sbjct: 823 ERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRN-------DCQQVCP 875
Query: 277 SSLS 280
SS+S
Sbjct: 876 SSVS 879
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VWSWG G G+LG G +L ++ +L+ L + + CG +ALT G V+
Sbjct: 4438 VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV-ECGSQFSVALTK-----SGAVY 4491
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G +LGHG + PK V G + I I+ G H SDSG ++T GD
Sbjct: 4492 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKK--IISIATGSLHCVACSDSGEVYTWGDND 4549
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GQLG G + P VS+ K++ ++ CG H+L L
Sbjct: 4550 EGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + RI++ + + L +++ G G++S A++ +G L+
Sbjct: 4226 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAG----GEQSLFAVTPDGKLFAT 4281
Query: 260 GRGFNSTSDVNCPQS--LPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHG 309
G G V S +P+ L Q G H L LT +GEV G G
Sbjct: 4282 GYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4341
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L RVS RP + V +L G+ V IA G+ HSA +T + ++TWG G +G+LG
Sbjct: 4342 KLGHGNRVSYDRP-----KLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLG 4396
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4397 HGDSEDQLRPKLVEALLGYR----AIDIACGSG 4425
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
C RH + + + + Y +G+G+ +LG R+V + H ++ V
Sbjct: 638 CEGRHFMAIDSN---HNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCT- 693
Query: 245 DRSAALSAEGHLYTWGRGFNS-----TSDVNCPQSLPSSL---SFSQAALGWN--HVLVL 294
SA ++ G+L TWGRG + SD C +L ++L + ALG H L L
Sbjct: 694 -YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLAL 752
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +G V G +G L + S +P+ V E + +V +I AG+++S ++
Sbjct: 753 TSEGLVFAWGDGDYGKLGNGNCNGSLQPILV--ESLP-----RVQRIFAGSQYSVALSSE 805
Query: 355 RAIMTWG 361
+ TWG
Sbjct: 806 GQVYTWG 812
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + L P L+ SL V + G + +AL+S G+V++
Sbjct: 758 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRIFAGSQYSVALSS-----EGQVYT 810
Query: 96 WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + LGH + ++ P+ V+ R I ++ G H +S SG +F G
Sbjct: 811 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDMAVGVAHCLALSSSGEVFGWG 866
Query: 152 DGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLV 192
Q+ S SP+ V + IAC SL+
Sbjct: 867 RNDCQQVCPSSVSSEPLLRSPILV-ALPTLPASGIACTAGQSLI 909
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
K++ L+ V + G +SAV+T ++TWG G + +LG GN+ D+ P +V E
Sbjct: 676 KIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEH 735
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
T ++V GSG ++++
Sbjct: 736 ----TVVDVALGSGDAHSLA 751
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 149/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLED-----GEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D C L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
G +V P G +SA DR
Sbjct: 328 GTG--HTCNVKCPSPVKGYWAAHSGQLSARADR 358
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 157/335 (46%), Gaps = 30/335 (8%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G K+ WG S G G V + +P T H ++ ++ G NHS F+ + G ++T
Sbjct: 57 GKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYT 116
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG T GQLGH + S P ++ + ++++ +ACG HSL L +++ +G+G
Sbjct: 117 CGVNTKGQLGHE--KEGSKPEQIGALADQHIIHVACGESHSLALSDQ---GRLFSWGAGS 171
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG++ SV++P++ L+ I+ +S AL+A+G + WG+ NS +
Sbjct: 172 DGQLGLTTTE-DSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQ--NSHGQL 228
Query: 270 NCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ PS S +Q A G H L+ G V G + G L +
Sbjct: 229 GLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQD 288
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P V L + KV+ I+ G++H+AV+T+ + T+G G GQLG + D+++
Sbjct: 289 RESPCHVKLLRTQ-----KVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVN 343
Query: 379 PKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
P+ V +G E R L SG YA
Sbjct: 344 PRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 159/362 (43%), Gaps = 32/362 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
K+ WG + G GT L P+ SV +ACGG H + L G+
Sbjct: 59 KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLE-----DGE 113
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V++ G + GQLGH + + P+ + D H I H++ G +HS +SD G LF+ G
Sbjct: 114 VYTCGVNTKGQLGHEK--EGSKPEQIGALADQH---IIHVACGESHSLALSDQGRLFSWG 168
Query: 152 DGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+ GQLG S + P + + + Q++CG H L L D Q + +G
Sbjct: 169 AGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAAD---GQFFAWGQNSH 225
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG+ K+ S + PQ L I + ++A G S ALS G ++ WG+ G +
Sbjct: 226 GQLGLGKE-FPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLS 284
Query: 265 STSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
D P L + + G +H VLT G V G G L P
Sbjct: 285 DEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNP 344
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P
Sbjct: 345 -----RRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSP 399
Query: 382 VN 383
V
Sbjct: 400 VK 401
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 159/378 (42%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G G G+LG G + P LL V +A GG H LAL+S G
Sbjct: 4345 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4399
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + +Y +P + I I+ G +HS ++ +G L+T G
Sbjct: 4400 VYSWGEGDDGKLGHGNRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4457
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD +P V + + V +ACG +L + D + V+ +G G
Sbjct: 4458 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4514
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + ++ + S AL+ G +YTWG+G
Sbjct: 4515 GKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG-------- 4564
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4565 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4583
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H T+ + TWG + GQLG G T P++V+ Q
Sbjct: 4584 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVH---ALQG 4640
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 4641 KKIT-RVACGSAHTLAWS 4657
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 169/393 (43%), Gaps = 37/393 (9%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
E Q V+ WG QLG + P LS L + + GG+ L + S
Sbjct: 3253 EPPPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHI--AGGSKTLFVVSQE 3310
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
GK+++ G G++G+LG G+ + PK + F + + +G H+ ++ G
Sbjct: 3311 ----GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGK 3366
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F+ G+G G+LGHG+ S P + S +K + IACG HS + ++Y +G
Sbjct: 3367 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 3423
Query: 207 SGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
G+ G+LG + L Q +G I++ A G R A AL+A+G +Y+WG G
Sbjct: 3424 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQV----ACGSRDAQTMALTADGSVYSWGDG 3479
Query: 263 ----FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
C L + L Q G L LT GEV G + L
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3539
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+P V L G KV+ +A GA H VT+ + WG +HGQ G G+T
Sbjct: 3540 NDHHVRKP-----TLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3594
Query: 375 DQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
P +V+ L D NR V CGS + A
Sbjct: 3595 VNKKPSLVHELDDARVNR-----VSCGSSHSIA 3622
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG G G+LG G +DE P+L+ +++ +ACG + L+S G++
Sbjct: 526 VYSWGNGDGGRLGHGDRVWYDE--PKLVEALVDKNITFIACGSTYSAVLSS-----NGEL 578
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG+ G+LGHG + L P VT +GH +G + + V+ SG +F+ GDG
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G+ +L
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEGYRL 695
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + + P+V L ++ + AL+ + +Y WGR
Sbjct: 696 GHGNE--EHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGR 741
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 130/308 (42%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P R ++ G V+ G ++
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLLAVTADGKVYAT 4349
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + V ++A G +H L L + VY +G G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4406
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG + DR P++ L EIV I+ G SAA+++ G LYTWG+
Sbjct: 4407 DDGKLGHGNRLMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4460
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 4461 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4520
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
P+ K+ +L G+ VI++ G++ S +T + AI TWG G++ +LG G
Sbjct: 4521 GSDGCKIPM-----KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4575
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4576 HVRRPRKV 4583
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + V LP + L + V ++ A++A+G +Y G
Sbjct: 4294 IYGWGHNHRGQLGGLEGA--KVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4351
Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
G T V P L S + + A+ G H L L+ +G V G G L
Sbjct: 4352 GAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4411
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R+ RP + + L G +++ IA G HSA +T + TWG G +G+LG G
Sbjct: 4412 GHGNRLMYDRP-----KLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4466
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V +++ ++V CGSG
Sbjct: 4467 DSEDQLTPKLVEALQDYK----VIDVACGSG 4493
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 39/312 (12%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ L C ++ L+ I G V+ GS Q + + V KPVT H
Sbjct: 463 IKQLCCTERALMILS-----ISGNVYMMYYGSETQ--YPQRVYGFSEKPVTMIASH---- 511
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
S G ++ DS +++ G+G G+LGHGD + P V + V+KN+ IACG
Sbjct: 512 ---SDGTHYLALTQDSS-VYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGST 567
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-R 246
+S VL + ++Y +G G G+LG +V +P + L+ +V ++ +GD +
Sbjct: 568 YSAVLSSN---GELYTWGRGNYGRLGHGNS--DNVLIPTLVTALNGHMVVHVACGSGDSQ 622
Query: 247 SAALSAEGHLYTWGRG-FNSTSDVNC-----PQSLPSSLSFSQAAL--GWNHVLVLTGDG 298
+ ++A G +++WG G + C P+ + L + A + G LT G
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 682
Query: 299 EVLMLGGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
EV G L + E + + + V K KV ++ G H +TE++
Sbjct: 683 EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTK-------KVKELCVGNFHVLALTEDQL 735
Query: 357 IMTWGWGEHGQL 368
+ WG ++GQ+
Sbjct: 736 VYGWGRNDYGQI 747
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 101/228 (44%), Gaps = 22/228 (9%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P +V F K V IA H L L +D + VY +G+G G+LG DR+ P
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQD---SSVYSWGNGDGGRLG-HGDRVW-YDEP 548
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLS- 280
++ L D I I+ SA LS+ G LYTWGRG + SD +L ++L+
Sbjct: 549 KLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNG 608
Query: 281 ----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
G + L +T G V G ++G L S P + V L +
Sbjct: 609 HMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTP-----KIVDKLLDI 663
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V ++ G + SA +T + TWG GE +LG GN +PKV+ +
Sbjct: 664 NVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV 711
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L LT D V G G L +RV P + V L + IA G+ +SA
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEP-----KLVEALVDKNITFIACGSTYSA 570
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
V++ N + TWG G +G+LG GN+ + + P +V N + V CGSG
Sbjct: 571 VLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA----LNGHMVVHVACGSG 619
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L + SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ S S+ +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-- 383
+V L G +V QIA G +H+ A+V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 384 ----------LGDEFQNRDTQLEVFCGSGFTYAI 407
D F+ R + ++F G T+ +
Sbjct: 345 WAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH + D + P+ V G +T I+ G H+ V SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
GQLG G + +HSS + + F + V QI G + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L + SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ S S+ +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-- 383
+V L G +V QIA G +H+ A+V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 384 ----------LGDEFQNRDTQLEVFCGSGFTYAI 407
D F+ R + ++F G T+ +
Sbjct: 345 WAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH + D + P+ V G +T I+ G H+ V SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
GQLG G + +HSS + + F + V QI G + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R I + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--IRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 165/388 (42%), Gaps = 48/388 (12%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP------- 338
Query: 387 EFQNRDTQLEVFCGSGFTYAISRHCLPS 414
F G YA + CLP
Sbjct: 339 -----------FTVKGNWYAYNGQCLPD 355
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L + SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ S S+ +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-- 383
+V L G +V QIA G +H+ A+V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 384 ----------LGDEFQNRDTQLEVFCGSGFTYAI 407
D F+ R + ++F G T+ +
Sbjct: 345 WAAHSGQLSARADRFKYRVVK-QIFSGGDQTFVL 377
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH + D + P+ V G +T I+ G H+ V SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 KGQLGTG----HTCNVKCPSPVK 342
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 159/378 (42%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G G G+LG G + P LL V +A GG H LAL+S G
Sbjct: 4312 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4366
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + +Y +P + I I+ G +HS ++ +G L+T G
Sbjct: 4367 VYSWGEGDDGKLGHGNRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4424
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD +P V + + V +ACG +L + D + V+ +G G
Sbjct: 4425 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4481
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + ++ + S AL+ G +YTWG+G
Sbjct: 4482 GKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG-------- 4531
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4532 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4550
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H T+ + TWG + GQLG G T P++V+ Q
Sbjct: 4551 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVH---ALQG 4607
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 4608 KKIT-RVACGSAHTLAWS 4624
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 169/393 (43%), Gaps = 37/393 (9%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
E Q V+ WG QLG + P LS L + + GG+ L + S
Sbjct: 3248 EPPPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHI--AGGSKTLFVVSQE 3305
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
GK+++ G G++G+LG G+ + PK + F + + +G H+ ++ G
Sbjct: 3306 ----GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGK 3361
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F+ G+G G+LGHG+ S P + S +K + IACG HS + ++Y +G
Sbjct: 3362 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 3418
Query: 207 SGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
G+ G+LG + L Q +G I++ A G R A AL+A+G +Y+WG G
Sbjct: 3419 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQV----ACGSRDAQTMALTADGSVYSWGDG 3474
Query: 263 ----FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
C L + L Q G L LT GEV G + L
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+P V L G KV+ +A GA H VT+ + WG +HGQ G G+T
Sbjct: 3535 NDHHVRKP-----TLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTI 3589
Query: 375 DQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
P +V+ L D NR V CGS + A
Sbjct: 3590 VNKKPSLVHELDDARVNR-----VSCGSSHSIA 3617
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 36 VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG G G+LG G +DE P+L+ +++ +ACG + L+S G++
Sbjct: 518 VYSWGNGDGGRLGHGDRVWYDE--PKLVEALVDKNITFIACGSTYSAVLSS-----NGEL 570
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG+ G+LGHG + L P VT +GH +G + + V+ SG +F+ GDG
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G+ +L
Sbjct: 631 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEGYRL 687
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G + + P+V L ++ + AL+ + +Y WGR
Sbjct: 688 GHGNE--EHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGR 733
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 130/308 (42%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P R ++ G V+ G ++
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLLAVTADGKVYAT 4316
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + V ++A G +H L L + VY +G G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4373
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG + DR P++ L EIV I+ G SAA+++ G LYTWG+
Sbjct: 4374 DDGKLGHGNRLMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4427
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 4428 GRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4487
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
P+ K+ +L G+ VI++ G++ S +T + AI TWG G++ +LG G
Sbjct: 4488 GSDGCKIPM-----KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4542
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4543 HVRRPRKV 4550
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + V LP + L + V ++ A++A+G +Y G
Sbjct: 4261 IYGWGHNHRGQLGGLEGA--KVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGY 4318
Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
G T V P L S + + A+ G H L L+ +G V G G L
Sbjct: 4319 GAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4378
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R+ RP + + L G +++ IA G HSA +T + TWG G +G+LG G
Sbjct: 4379 GHGNRLMYDRP-----KLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4433
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V +++ ++V CGSG
Sbjct: 4434 DSEDQLTPKLVEALQDYK----VIDVACGSG 4460
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 132/320 (41%), Gaps = 55/320 (17%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ L C ++ L+ I G V+ GS Q + + V KPVT H
Sbjct: 455 IKQLCCTERALMILS-----ISGNVYMMYYGSETQ--YPQRVYGFSEKPVTMIASH---- 503
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
S G ++ DS +++ G+G G+LGHGD + P V + V+KN+ IACG
Sbjct: 504 ---SDGTHYLALTQDSS-VYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGST 559
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDR 246
+S VL + ++Y +G G G+LG +V +P + L H + V + +
Sbjct: 560 YSAVLSSN---GELYTWGRGNYGRLGHGNS--DNVLIPTLVTALNGHMVVYVACGSGDSQ 614
Query: 247 SAALSAEGHLYTWGRG------------------FNSTSDVNCPQSLPSSLSFSQAALGW 288
+ ++A G +++WG G + D+N + FS A +
Sbjct: 615 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGG-QFSAALTAY 673
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
V G GE LG + + P+ + +P KV ++ G H
Sbjct: 674 GEVYTW-GKGEGYRLGHGNEEHIRYPKVIEVLKP-------------KKVKELCVGNFHV 719
Query: 349 AVVTENRAIMTWGWGEHGQL 368
+TE++ + WG ++GQ+
Sbjct: 720 LALTEDQLVYGWGRNDYGQI 739
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P +V F K V IA H L L +D + VY +G+G G+LG DR+ P
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQD---SSVYSWGNGDGGRLG-HGDRVW-YDEP 540
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQSLPSSLS- 280
++ L D I I+ SA LS+ G LYTWGRG + SD +L ++L+
Sbjct: 541 KLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNG 600
Query: 281 ----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
+ G + L +T G V G ++G L S P + V L +
Sbjct: 601 HMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTP-----KIVDKLLDI 655
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V ++ G + SA +T + TWG GE +LG GN +PKV+ +
Sbjct: 656 NVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV 703
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L LT D V G G L +RV P + V L + IA G+ +SA
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEP-----KLVEALVDKNITFIACGSTYSA 562
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
V++ N + TWG G +G+LG GN+ + + P +V N + V CGSG
Sbjct: 563 VLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA----LNGHMVVYVACGSG 611
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R +I ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDR-SIKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L + SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 172/394 (43%), Gaps = 45/394 (11%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ S S+ +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GVNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-- 383
+V L G +V QIA G +H+ A+V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGH 344
Query: 384 ----------LGDEFQNRDTQLEVFCGSGFTYAI 407
D F+ R + ++F G T+ +
Sbjct: 345 WAAHSSQLSARADRFKYRVVK-QIFSGGDQTFVL 377
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L L+ +Y FG G +GQL
Sbjct: 270 SCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH + D + P+ V G +T I+ G H+ V SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSVNDEVNPRRVLELMGSE--VTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 155 FGQLG-------------HGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVL 193
GQLG G + +HSS + + F + V QI G + VL
Sbjct: 324 KGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVL 377
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 195/428 (45%), Gaps = 60/428 (14%)
Query: 17 INNAKPKIEEEEEEQQVVKVWSWGAGT--------DGQLG--TGRLHDELSPQLLNLSSL 66
+N+ P+ E+++ + V+ WG G D Q G + D L P+LL + +
Sbjct: 248 LNHGSPRTEKKDILKDVL---IWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVM 304
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
V+ ++ G H +T G+VF WG GS G+LGH +D PK V DG
Sbjct: 305 LDVTNISLGRKHAALITKR-----GEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDG--V 357
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVS-SFVNKNVHQI 183
+ ++ G + ++DSG L+ G+ +G + RS S P ++S + +
Sbjct: 358 HVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNV 417
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
ACG H+ ++ Q++ +G G G LG + SVS P+ L + + ++
Sbjct: 418 ACGDWHTAIVSS---SGQLFTYGDGSFGVLG--HGNLLSVSQPKEVESLKGLLVKSVACG 472
Query: 244 GDRSAAL-----------SAEGHLYTWGRGFNST---SDVNCPQSLPS------SLSFSQ 283
+AA+ G L+TWG G +D+ + LP+ L F Q
Sbjct: 473 SWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLE-KKLLPTCVAQLVELDFDQ 531
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
+ G + LT G+V +G S HG L +P + S+ + + L V +I++
Sbjct: 532 VSCGRMLTVALTNTGKVYTMGSSVHGQLGNPH----AKDKSIVIVE-GKLKEEFVKEISS 586
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGSG 402
G+ H A +T + ++ TWG G +GQLGLGN D+ P +V RD Q++ + CGS
Sbjct: 587 GSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVE-----ALRDMQVQSIACGSN 641
Query: 403 FTYAISRH 410
T AI H
Sbjct: 642 LTAAICLH 649
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 162/355 (45%), Gaps = 45/355 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G P Q+LNLS V L+ G H +AL S G V+
Sbjct: 207 VWAWGDNRYGQLGDGTTTQRAVPVQVLNLSG---VMNLSAGSFHTVALRSD-----GSVW 258
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G P V D + + AG HS V G ++ GD
Sbjct: 259 AWGFNAYGQLGDGTTTSRFQPVQVGLSD-----VLTLVAGNYHSLAVRSDGAVWAWGDNR 313
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+ QLG G + SS V V S ++ V +A G +HSLVL D V+ +G GQLG
Sbjct: 314 YRQLGDG--TTTSSRVPVQSGLSGGVTLVA-GYKHSLVLRSD---GTVWSWGDNVFGQLG 367
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NST- 266
R +V + +++G D+ S+ S L + G ++ WG + N T
Sbjct: 368 DGTFNPRSSAVKVSWLSLGRADV-----SSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTG 422
Query: 267 --SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
S V P L S++ S G+ H LVL D V G + HG L D TRP+
Sbjct: 423 LDSLVAAPVGLGGSVAVSA---GFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQ 479
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
VA L GV + +AG+ HS + N + WG+ +GQLG G D++ P
Sbjct: 480 VA-----GLSGVSAV--SAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRLQP 527
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 149/351 (42%), Gaps = 35/351 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G P + LS V L G H LA+ S G V+
Sbjct: 256 SVWAWGFNAYGQLGDGTTTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSD-----GAVW 307
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG QLG G + P G + AG+ HS + G +++ GD
Sbjct: 308 AWGDNRYRQLGDGTTTSSRVPVQSGLSGG-----VTLVAGYKHSLVLRSDGTVWSWGDNV 362
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G + SS VKV S+++ ++ G HS+VL + V+ +G GQLG
Sbjct: 363 FGQLGDGTFNPRSSAVKV-SWLSLGRADVSSGQLHSVVLDSN---GAVWAWGDNYSGQLG 418
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
V+ P +GL V +SA + L A+ ++ WG G + +D
Sbjct: 419 NGTGLDSLVAAP---VGLGG--SVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTD 473
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S + G H L L +G V G + +G L D +P+ VA
Sbjct: 474 RTRPVQVAGLSGVSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVA-- 531
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L G V+ +AAG HS + + + WG+ GQ+G G+ + P
Sbjct: 532 ---GLSG--VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSWRFLP 577
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 158/358 (44%), Gaps = 38/358 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG T GQLG G SP + + +LS V L G +H LAL S G V++
Sbjct: 107 VWAWGDNTAGQLGNGTA--SASPVPVRVQNLSGVVSLGSGFSHGLALRSD-----GTVWA 159
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG QLG+ + P V G + + AG +S + G ++ GD +
Sbjct: 160 WGDNRYNQLGNVGATRSNLPVQVPGLSG----VIAVVAGGYYSLALRSDGTVWAWGDNRY 215
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + PV+V + V ++ G H++ L D V+ +G GQLG
Sbjct: 216 GQLGDGTTTQRAVPVQVLNL--SGVMNLSAGSFHTVALRSD---GSVWAWGFNAYGQLG- 269
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTS 267
D + V +GL D+ + + A S A+ ++G ++ WG G ++S
Sbjct: 270 --DGTTTSRFQPVQVGLSDV--LTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSS 325
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V L ++ G+ H LVL DG V G + G L D + P S A+
Sbjct: 326 RVPVQSGLSGGVTL---VAGYKHSLVLRSDGTVWSWGDNVFGQLGD----GTFNPRSSAV 378
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
KVS L + +++G HS V+ N A+ WG GQLG G D + V LG
Sbjct: 379 -KVSWLS-LGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLG 434
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 142/323 (43%), Gaps = 32/323 (9%)
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
L SS + LA G H + + S G V++WG GQLG G +VD+ P VT
Sbjct: 32 LGGRSSAARLALGQYHSVGVHSD-----GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS 86
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G + +++G HS +S G ++ GD T GQLG+G + PV+V + V
Sbjct: 87 G----VVSVASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASASPVPVRVQNL--SGVVS 140
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ G H L L D V+ +G + QLG + RS +LP GL ++ + A
Sbjct: 141 LGSGFSHGLALRSD---GTVWAWGDNRYNQLG-NVGATRS-NLPVQVPGLSG--VIAVVA 193
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
G S AL ++G ++ WG G +T+ P + + + G H + L
Sbjct: 194 GGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRS 253
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG V G + +G L D S +P+ V L V+ + AG HS V + A
Sbjct: 254 DGSVWAWGFNAYGQLGDGTTTSRFQPVQVGLS--------DVLTLVAGNYHSLAVRSDGA 305
Query: 357 IMTWGWGEHGQLGLGNTCDQIHP 379
+ WG + QLG G T P
Sbjct: 306 VWAWGDNRYRQLGDGTTTSSRVP 328
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 37/343 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L D SP + +++LS V +A G H L L+S G V++
Sbjct: 57 VWAWGFNRQGQLGDGTLVD--SPTPVRVTNLSGVVSVASGDYHSLGLSSD-----GTVWA 109
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG+G + P V G + + +G++H + G ++ GD +
Sbjct: 110 WGDNTAGQLGNGTASASPVPVRVQNLSG----VVSLGSGFSHGLALRSDGTVWAWGDNRY 165
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG+ + PV+V V + G +SL L D V+ +G + GQLG
Sbjct: 166 NQLGNVGATRSNLPVQVPGL--SGVIAVVAGGYYSLALRSD---GTVWAWGDNRYGQLGD 220
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----NC 271
R+V + QV L+ ++ +SA + AL ++G ++ W GFN+ +
Sbjct: 221 GTTTQRAVPV-QV---LNLSGVMNLSAGSFHTVALRSDGSVWAW--GFNAYGQLGDGTTT 274
Query: 272 PQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P + S G H L + DG V G + + L D SS P+ L
Sbjct: 275 SRFQPVQVGLSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQSGLS 334
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
GV ++ AG +HS V+ + + +WG GQLG G
Sbjct: 335 G-----GVTLV---AGYKHSLVLRSDGTVWSWGDNVFGQLGDG 369
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 153/356 (42%), Gaps = 37/356 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G D L + L +VS G H L L + ++V +
Sbjct: 405 AVWAWGDNYSGQLGNGTGLDSLVAAPVGLGGSVAVS---AGFKHTLVLKADTTV-----W 456
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G + D P V G ++ +SAG HS + +G ++ G
Sbjct: 457 AWGVNEHGQLGDGTLTDRTRPVQVAGLSG----VSAVSAGSYHSLALRSNGTVWAWGFNR 512
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G PV+V+ V +A G HSL L D V+ +G GQ+G
Sbjct: 513 YGQLGDGTNTDRLQPVQVAGL--SGVVAVAAGDSHSLALRSD---GTVWAWGYNFDGQIG 567
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R + + V + G G S AL ++G ++TWG G ST+
Sbjct: 568 DGSYSWRFLPVQVVGLSGVVSVSAG----GYHSLALRSDGTVWTWGYNGSGQLGDGSTA- 622
Query: 269 VNCPQSLPSSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+N P + + +LG H L L DG V G + G L D ++ + P+
Sbjct: 623 INKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPV--- 679
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+VS L GV + + AG HS + + WG+ GQLG G D + P V
Sbjct: 680 --RVSGLSGV--VSVVAGDYHSLARRSDGTVWAWGYNGEGQLGDGTRNDTLVPVWV 731
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 24/271 (8%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G R + ++ G HS V G ++ G GQLG G +PV+V++ V
Sbjct: 33 GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNL--SGVVS 90
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE-IVGIS 241
+A G HSL L D V+ +G GQLG + S V + + ++ +V +
Sbjct: 91 VASGDYHSLGLSSD---GTVWAWGDNTAGQLGNG-----TASASPVPVRVQNLSGVVSLG 142
Query: 242 ANGDRSAALSAEGHLYTWGRG-FNSTSDV-----NCPQSLPSSLSFSQAALGWNHVLVLT 295
+ AL ++G ++ WG +N +V N P +P G + L L
Sbjct: 143 SGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLSGVIAVVAGGYYSLALR 202
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
DG V G + +G L D P+ +V NL GV + ++AG+ H+ + +
Sbjct: 203 SDGTVWAWGDNRYGQLGDGTTTQRAVPV-----QVLNLSGV--MNLSAGSFHTVALRSDG 255
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
++ WG+ +GQLG G T + P V L D
Sbjct: 256 SVWAWGFNAYGQLGDGTTTSRFQPVQVGLSD 286
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R I + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--IRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 165/388 (42%), Gaps = 48/388 (12%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP------- 338
Query: 387 EFQNRDTQLEVFCGSGFTYAISRHCLPS 414
F G YA + CLP
Sbjct: 339 -----------FTVKGNWYAYNGQCLPD 355
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 162/366 (44%), Gaps = 38/366 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG + GQLG G + +E L P + S V +ACG H L LT+ G
Sbjct: 1 MALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTA-----NG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++ G QLGH + +P+ + Y + I+ G HS +++ G + + G
Sbjct: 56 QVYACGNNDHHQLGH----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
D GQ+GH D P + V++ V QIACG HSL L C ++Y +GS
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLAL-TSC--GELYSWGSNIY 168
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGI-----SANGDRSAALSAEGHLYTWGR---- 261
GQLGV + LP L I+GI + G+ S +S ++ WG+
Sbjct: 169 GQLGVQSPK----DLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCG 224
Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G N + P L S +L G + + LT +G V G ++G L
Sbjct: 225 QLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSN 284
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+ P V L G + Q+A G H+ A+V + ++G G GQLG NT Q
Sbjct: 285 NEMIP-----RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQ 339
Query: 377 IHPKVV 382
PKVV
Sbjct: 340 TLPKVV 345
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+++SWG+ GQLG D S L L+++ + + +ACGG H ++ S+V G
Sbjct: 159 ELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFG- 217
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + GQLG + + YP + + ++ G +S F+++ G +FTCG
Sbjct: 218 ----WGKNTCGQLGLNDEQNRAYPSQLK--SMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P V + + Q+ACG RH+L L+ G +VY FG G G
Sbjct: 272 AGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPS--GGRVYSFGLGASG 329
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG +++ I S +LP+V IG
Sbjct: 330 QLG-TRNTI-SQTLPKVVIG 347
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 123/269 (45%), Gaps = 41/269 (15%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ GD + GQLG G + P ++ + V QIACG RH+L L + QVY
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN---GQVYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+ QLG R + +P+ L ++ I+ S AL+ G + +WG
Sbjct: 60 CGNNDHHQLGHELPTKRPLPIPE----LQAYVVIQIACGSRHSMALTEWGQILSWGDNDC 115
Query: 262 ---GFNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGML- 311
G ++ +DV LP L F Q A G NH L LT GE+ G + +G L
Sbjct: 116 GQVGHSTDNDV---IELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 172
Query: 312 -SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
P+ + P S A +++ + G+ + IA G HS +++++ A+ WG GQLGL
Sbjct: 173 VQSPKDL----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGL 228
Query: 371 GNTCDQIHP-----------KVVNLGDEF 388
+ ++ +P + V GDE+
Sbjct: 229 NDEQNRAYPSQLKSMRTLGVRFVTCGDEY 257
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 157/356 (44%), Gaps = 30/356 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
W G G + + PQ S S+ +ACGG H + L G+V++ G
Sbjct: 7 WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLE-----DGEVYTCGL 61
Query: 99 GSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+ GQ
Sbjct: 62 NTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDQGQLFSWGAGSDGQ 116
Query: 158 LGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH S + P + + + Q++CG H + L D Q + +G + GQLG+
Sbjct: 117 LGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAAD---GQFFTWGQNRHGQLGLG 173
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
K+ S + PQ L I + ++A G S ALS G ++ WGR G + +D
Sbjct: 174 KE-FPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQ 232
Query: 271 CP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P L + + G H VLT G V G G L P
Sbjct: 233 SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNP-----R 287
Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 288 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 343
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 143/298 (47%), Gaps = 30/298 (10%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+I ++ G NHS F+ + G ++TCG T GQLGH R + P ++ + ++++ +ACG
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQHIIHVACG 93
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HSL L Q++ +G+G GQLG + SV++P++ L+ I+ +S
Sbjct: 94 ESHSLALSDQ---GQLFSWGAGSDGQLGHTTTE-DSVAIPRLIKKLNQQMILQVSCGNWH 149
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLT 295
AL+A+G +TWG+ N + + PS S +Q A G H L+
Sbjct: 150 CMALAADGQFFTWGQ--NRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G V G ++ G L + P V L + KV+ I+ G EH+AV+T++
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSG 262
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
+ T+G G GQLG + D+++P+ V +G E R L SG YA
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 158 QFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS-----LSGAV 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 213 FGWGRNNAGQLGLSDETDRQSPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+FGQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 271 SFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 328
Query: 214 G 214
G
Sbjct: 329 G 329
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
++++ ++ACG HS+ LL+D +VY G +GQLG ++ + P+ L D
Sbjct: 34 DRSIKEVACGGNHSIFLLED---GEVYTCGLNTKGQLGHEREGNK----PEQIGALADQH 86
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS---FSQAALG 287
I+ ++ S ALS +G L++WG G + +T D L L+ Q + G
Sbjct: 87 IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCG 146
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H + L DG+ G + HG L + P + ++V +L+G+ + Q+AAG H
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLG----LGKEFPSQASPQRVKSLEGIPLAQVAAGGAH 202
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
S ++ + A+ WG GQLGL + D+ P V L
Sbjct: 203 SFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKL 239
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 266
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 267 FGAGSFGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 325 RGQLGTG----HTCNVKCPSPVK 343
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 156/359 (43%), Gaps = 35/359 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW WG GQLG G D +P + +S L S V+ +A GGAH ALTS G V
Sbjct: 80 EVWCWGYNWSGQLGDGSYTDRSTP--VAVSGLPSGVTAIAAGGAHTCALTSS-----GGV 132
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG GQLG G D P V+ G +T I+AG H+ + SG ++ G
Sbjct: 133 MCWGGNYFGQLGDGSYTDRSTPVAVS---GLPSGVTAIAAGGAHTCALMSSGGVWCWGYN 189
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G H +PV VS ++ V IA G H+ L V+ +G GQL
Sbjct: 190 LSGQLGDGSTIYHITPVAVSGLPSE-VTAIAAGYAHTCALTGS---GGVWCWGDNGFGQL 245
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---------FN 264
G S P GL + I+A G + AL++ G ++ WGR F
Sbjct: 246 G--DGSFTDSSTPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFT 302
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ S LPS ++ A G H LT G V GG+ G L D + P
Sbjct: 303 NRSTPGAVGGLPSGVT--AIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTP-- 358
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L V IAAG H+ T + + WG +GQLG G T D+ P V+
Sbjct: 359 ---GAVSGLP-SGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVS 413
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 158/354 (44%), Gaps = 35/354 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G + +P + S L S V+ +A G H ALTS G V+
Sbjct: 438 VWCWGDNFYGQLGDGTTTNRSTPGAV--SGLPSGVTAIAAGNYHTCALTSS-----GGVW 490
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR SGQLG G + P V G +T I+AG H+ + SG ++ G
Sbjct: 491 CWGRNDSGQLGDGTTTNRSTPGAV---GGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNN 547
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G Y S+PV V V IA G H+ L + V+ +G+ GQLG
Sbjct: 548 RGQLGDGSYTDSSTPVAVGGL-PSGVMAIAAGNYHTCALTGS---DGVWCWGTNSDGQLG 603
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
RS P GL + I+A + AL++ G ++ WG G +T++
Sbjct: 604 DGTTTNRST--PVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTN 660
Query: 269 VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P + LPS ++ A G H LTG G V G +++G L D + + P
Sbjct: 661 RSTPGAVSGLPSGVT--AIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTP--- 715
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
VS L V IAAG H+ +T + +M WG GQLG G + P
Sbjct: 716 --GAVSGLP-SGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 766
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 149/344 (43%), Gaps = 38/344 (11%)
Query: 49 TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
T RLH + S L V+ +A G H ALT G+V+ WG SGQLG G
Sbjct: 48 TTRLHTS------SFSPLQGVTAIAAGSWHTCALTGS-----GEVWCWGYNWSGQLGDGS 96
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
D P V+ G +T I+AG H+ ++ SG + G FGQLG G Y S+
Sbjct: 97 YTDRSTPVAVS---GLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRST 153
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
PV VS V IA G H+ L+ V+ +G GQLG D + V
Sbjct: 154 PVAVSGL-PSGVTAIAAGGAHTCALMSS---GGVWCWGYNLSGQLG---DGSTIYHITPV 206
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGF-----NSTSDVNCPQS---LPSSL 279
+ E+ I+A + AL+ G ++ WG GF S +D + P + LPS +
Sbjct: 207 AVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGV 266
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ A G + LT G V G + G L D + + P +V V
Sbjct: 267 --TAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLP------SGVT 318
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
IAAG H+ +T + + WG + GQLG G+ D+ P V+
Sbjct: 319 AIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVS 362
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 156/358 (43%), Gaps = 35/358 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G D +P + S L S V+ +A G H ALT V+
Sbjct: 387 VWCWGGNFYGQLGDGTTTDRSTPGAV--SGLPSGVTAIAAGNYHTCALTGSD-----GVW 439
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G + P V+ G +T I+AG H+ ++ SG ++ G
Sbjct: 440 CWGDNFYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGNYHTCALTSSGGVWCWGRND 496
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + S+P V V IA G H+ L+ V+ +G RGQLG
Sbjct: 497 SGQLGDGTTTNRSTPGAVGGL-PSGVTAIAAGDYHTCALMSS---GGVWCWGLNNRGQLG 552
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
D + S V +G ++ I+A + AL+ ++ WG G +T++
Sbjct: 553 ---DGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609
Query: 269 VNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P LPS ++ A G H LT G V G + G L D + + P
Sbjct: 610 RSTPVAVSGLPSGVT--AIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTP--- 664
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L V IAAG EH+ +T + + WG +GQLG G T ++ P V+
Sbjct: 665 --GAVSGLP-SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVS 719
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 131/299 (43%), Gaps = 27/299 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG GQLG G + +P + S V+ +A G H AL S G V+
Sbjct: 489 VWCWGRNDSGQLGDGTTTNRSTPGAVG-GLPSGVTAIAAGDYHTCALMSS-----GGVWC 542
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G D+ P V G + I+AG H+ ++ S ++ G +
Sbjct: 543 WGLNNRGQLGDGSYTDSSTPVAV---GGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSD 599
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + S+PV VS V IA G H+ L V+ +G GQLG
Sbjct: 600 GQLGDGTTTNRSTPVAVSGL-PSGVTAIAAGNYHTCALTSS---GGVWCWGYNLSGQLGD 655
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
RS P GL + I+A + + AL+ G ++ WG + +T++
Sbjct: 656 GTTTNRST--PGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNR 712
Query: 270 NCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P + LPS ++ A + H LTG G V+ G + G L D + T P+ V
Sbjct: 713 STPGAVSGLPSGVTAIAAGV--YHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 769
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G + +P + S L S V+ +A G H ALT G V+
Sbjct: 642 VWCWGYNLSGQLGDGTTTNRSTPGAV--SGLPSGVTAIAAGDEHTCALTGS-----GGVW 694
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G + P V+ G +T I+AG H+ ++ SG + G+
Sbjct: 695 CWGDNYYGQLGDGTTTNRSTPGAVS---GLPSGVTAIAAGVYHTCALTGSGGVMCWGNNG 751
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVH 181
GQLG G ++PV V + + V+
Sbjct: 752 DGQLGDGRPLYRTTPVDVVTSASWGVY 778
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 153/338 (45%), Gaps = 30/338 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG+ G+LG G + DE L P+ L+ ++V +ACG H + +T G+V
Sbjct: 28 MYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITK-----DGEV 82
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
FS G SGQLGH + L P + + G +HS V++ G LF G
Sbjct: 83 FSCGNNDSGQLGHEKPTKRLQMIP----GLDAFIFKQAACGASHSVAVNNWGQLFCWGSN 138
Query: 154 TFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + + +P V + V QIACG +H+L L + ++Y +GS GQ
Sbjct: 139 ADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNN---GELYAWGSNSDGQ 195
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ +D ++ + P++ GL I I I+ G S +S G ++ WGR G N
Sbjct: 196 LGLGQD-VKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
SD P L + + A G + LT DG V G +G L + P
Sbjct: 255 SDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILP-- 312
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
++ L G V QI+ G H+ + +R + W
Sbjct: 313 ---RQIIELMGSVVTQISCGKRHTLALVPSRG-KVYAW 346
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ +DGQLG G+ + E P+L+ + ++ +ACGG H + ++ G V
Sbjct: 184 ELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK-----SGAV 238
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR + GQLG ++ D P + + + +++ G S F++ G +FTCG G
Sbjct: 239 FGWGRNTFGQLGMNDISDKYVPCLLKTLRNAK--VKYVACGEEFSVFLTMDGGVFTCGAG 296
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG + P ++ + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 297 MYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPS--RGKVYAWGLGGSGQL 354
Query: 214 GVSKDRIRSVSLPQVTIG 231
G RSV+ PQ+ +G
Sbjct: 355 GSQT--ARSVATPQMVLG 370
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++ WG+ DGQLG G L +P+++ S V +ACG H LALT+ G++
Sbjct: 131 QLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN-----NGEL 185
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG S GQLG G+ V + +P I I+ G HS VS SG +F G
Sbjct: 186 YAWGSNSDGQLGLGQDV-KIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRN 244
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
TFGQLG D P + + N V +ACG S+ L D V+ G+G GQL
Sbjct: 245 TFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD---GGVFTCGAGMYGQL 301
Query: 214 --GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
G + + I LP+ I L + IS + AL + G +Y W
Sbjct: 302 GHGANSNEI----LPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++ WG G+LG G + D L P+ + F + I+ G H+ ++ G +F+C
Sbjct: 28 MYCWGSTVYGELGLGGIEDENILMPRELDFQKAT--AVEQIACGETHTVLITKDGEVFSC 85
Query: 151 GDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G+ GQLGH + + +F+ K Q ACG HS+ + Q++ +GS
Sbjct: 86 GNNDSGQLGHEKPTKRLQMIPGLDAFIFK---QAACGASHSVAVNN---WGQLFCWGSNA 139
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG+ + P++ L +V I+ + AL+ G LY WG NS +
Sbjct: 140 DGQLGLGTP-LTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGS--NSDGQL 196
Query: 270 NCPQSLP-----------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
Q + +++ + A G H +V++ G V G + G L +
Sbjct: 197 GLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISD 256
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + L KV +A G E S +T + + T G G +GQLG G ++I
Sbjct: 257 KYVPCL-----LKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEIL 311
Query: 379 PKVV 382
P+ +
Sbjct: 312 PRQI 315
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 35/272 (12%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
+ + ++ G +G+LG G + P ++ V QIACG H++++ KD
Sbjct: 21 LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKD- 79
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+V+ G+ GQLG K R +P GL + S A++ G L+
Sbjct: 80 --GEVFSCGNNDSGQLGHEKPTKRLQMIP----GLDAFIFKQAACGASHSVAVNNWGQLF 133
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQA---------ALGWNHVLVLTGDGEVLMLGGSHH 308
WG + + P ++ + +A A G H L LT +GE+ G +
Sbjct: 134 CWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSD 193
Query: 309 GMLSDPERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G L + V TRP + ++ L + + IA G HS VV+++ A+ WG GQ
Sbjct: 194 GQLGLGQDVKIETRP-----KLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQ 248
Query: 368 LGLGNTCDQIHP-----------KVVNLGDEF 388
LG+ + D+ P K V G+EF
Sbjct: 249 LGMNDISDKYVPCLLKTLRNAKVKYVACGEEF 280
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 171/383 (44%), Gaps = 48/383 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG T GQLG G + + + SL + + M++ GG H + +
Sbjct: 1214 ELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDR-----SFH 1268
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++SWG G GQLGHG PK + F G + I+ I+ G+ H+ + G LF G
Sbjct: 1269 IYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQK--ISSIATGYWHTLVLRSGGDLFAFGS 1326
Query: 153 GTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQ---------IACGMRHSLVLLKDCLGNQV 202
GQLG D + H P +V++ ++H I CG HS+ L+ G+ V
Sbjct: 1327 NEHGQLGLNDLKHHLPIPTRVNT---ADIHHAGQPTRVTGIFCGHSHSV--LRTSHGD-V 1380
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
Y FG+ +GQLG S P++ GL I I+ + + +Y WG+G
Sbjct: 1381 YSFGANAKGQLG--HGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQG 1438
Query: 263 FN------STSDVNCPQ--SLPSSLSFSQAALGWNHVLVLT---GD----GEVLMLGGSH 307
+ S + P+ L + + G H LT GD G V + G S
Sbjct: 1439 EHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSE 1498
Query: 308 HGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
HG L DP S + + +++ V+ +A+GAE +A++T N A+ WG G
Sbjct: 1499 HGKLGIGGDPRSPSLDKAYPAI---IPSINSANVVDLASGAEFNALITSNGALYMWGAGT 1555
Query: 365 HGQLGLGNTCDQIHPKVVNLGDE 387
HGQ+G G D P V+L E
Sbjct: 1556 HGQIGNGKNQDTWIPTRVSLSSE 1578
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 37/307 (12%)
Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY--RSHSSPV 170
++P P F+ +S GW H+ ++ G LFT G+ T GQLGHG + S+P+
Sbjct: 1183 VHPMPALRFNEKH--AKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPM 1240
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQV 228
+V S + ++ G H++V+ + +Y +G+GK GQL GVS +LP+
Sbjct: 1241 RVESLKQTPIMMMSLGGEHTVVIDRSF---HIYSWGNGKYGQLGHGVSTPH----NLPKR 1293
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-CPQSLPSSLSFSQAAL- 286
+I I+ + L + G L+ +G + +N LP + A +
Sbjct: 1294 IEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIH 1353
Query: 287 -------------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
G +H ++ T G+V G + G L S P + + L
Sbjct: 1354 HAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYP-----KLIQGL 1408
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDT 393
G + +I G H+ V T+ ++ WG GEH LG G+ +++ PK+V L F N+
Sbjct: 1409 KGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVEL---FVNKRV 1465
Query: 394 QLEVFCG 400
+ V CG
Sbjct: 1466 E-RVVCG 1471
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP--SSVIGGKV 93
V+ WG G LGTG +EL P+L+ L V + CG H LT P S GG V
Sbjct: 1432 VYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491
Query: 94 FSWGRGSSGQLGHG-----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
+ G G+LG G +D YP + + + +++G + ++ +G L+
Sbjct: 1492 YICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSAN--VVDLASGAEFNALITSNGALY 1549
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
G GT GQ+G+G + P +VS KN +Q S + L +
Sbjct: 1550 MWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFIVDESGSTITLSSSM 1599
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R T+ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDR-TVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + PQ+ S +V +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 179/387 (46%), Gaps = 51/387 (13%)
Query: 50 GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
G D L P+LL +++ V ++ GG H +T G+VF WG GS G LGH
Sbjct: 290 GMQSDALLPKLLESTTMLDVREISLGGKHAALVTK-----HGEVFCWGEGSGGXLGHKVN 344
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG--QLGHGDYRSHS 167
+D PK V G + +S G + ++ SG L+T GD G +G RS
Sbjct: 345 MDMGNPKIVESLTG--VLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQW 402
Query: 168 SPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P ++S +N ++ +ACG H ++ Q++ +G G G LG K + S+S P
Sbjct: 403 IPSRLSGPLNGTSISNVACGEWHMAIV---STSGQLFTYGDGTFGVLGHGK--LESISQP 457
Query: 227 QVTIGL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SDVN 270
+ L H IV + A DR + G L+TWG G D
Sbjct: 458 KEVESLSGLWVKAAACGPWHTAAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQE 515
Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ LP+ ++ F Q + G + LT G V +G + HG L +P+ + S
Sbjct: 516 -RKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQ----AKDKS 570
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+A+ L V +I++G+ H A +T ++ TWG G +GQLGLG+T D+ P VV
Sbjct: 571 IAIVG-GKLKDEFVKEISSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEA 629
Query: 385 GDEFQNRDTQLE-VFCGSGFTYAISRH 410
RD Q+E + CGSGFT AI H
Sbjct: 630 L-----RDRQVESIACGSGFTAAICLH 651
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 159/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + +V + CG H + + G V++
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G +F+ G +G
Sbjct: 59 GCNDLGQLGHDK--SRRKPEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
Q+G + P + S + + Q+ACG HSL L KD + ++ +G + GQLG+
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKD---SDIFSWGQNQYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ I+ P+ L I I+A G S AL+ G ++ WGR G +D
Sbjct: 172 GLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
N P L S S G +H LT +G V G +G L P
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H+ A V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVK 342
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 140/301 (46%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINK--NVRDVGCGSRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + + + ++CG H+L L QV+ +G
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDK---GQVFSWGHAVY 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQ+G+S + +P+ L D++IV ++ S ALS + +++WG+ G
Sbjct: 114 GQIGLSTAE-EYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172
Query: 265 STSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C SLS F+ A G H LT G + G + G L +
Sbjct: 173 LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P AL K +L K+I I G +H+A +T+ + T+G G +GQLG +T +++P+
Sbjct: 233 P---ALLK--SLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRK 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G + E +P+ ++ SLS + +A GG H ALT I G
Sbjct: 158 IFSWGQNQYGQLGLGLEIKKECAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WGR GQLG + D P + + I HI G +H+ ++ G +FT G
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQK--IIHICCGEDHTAALTKEGGVFTFGA 268
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QIACG +H+L + ++Y FG G GQ
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326
Query: 213 LG 214
LG
Sbjct: 327 LG 328
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V+SWG GQ+G + + P+ N+ SLS V + +ACG H LAL+ S
Sbjct: 104 QVFSWGHAVYGQIGLSTAEEYIRVPR--NIKSLSDVQIVQVACGHHHSLALSKDSD---- 157
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+FSWG+ GQLG G E+ P+ + G + HI+AG HS ++ SG +F
Sbjct: 158 -IFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPF--AHIAAGGGHSFALTISGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D + P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H+ FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTINRKSPFTVK 342
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 5 LMEETEKGKSALINNAKP-KIEE----EEEEQQVVK---VWSWGAGTDGQLGTGRLHDEL 56
L +ET++ AL+ + + KI E+ + K V+++GAG GQLG + E+
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
+P+ + S V+ +ACG H LA PSS G+++S+G G +GQLG G ++ P
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAFV-PSS---GRIYSFGLGGNGQLGTGSTINRKSPF 339
Query: 117 PV 118
V
Sbjct: 340 TV 341
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 164/367 (44%), Gaps = 34/367 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG G+LG G + +E + P+ ++ S V + CG +H L LT G
Sbjct: 1 MAIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE-----G 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR------YTITHISAGWNHSGFVSDSG 145
K+++ G GQLGH +D L K R Y IT IS G HS +++ G
Sbjct: 56 KMYACGNNDHGQLGHD--LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWG 113
Query: 146 CLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+F+ G GQLGH + +P + + K+V QIA G H L L + ++Y
Sbjct: 114 QVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNN---GELYA 170
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
+GS GQLG+ V +P + L + I I+ G+ S A+S G ++ WG+
Sbjct: 171 WGSNSYGQLGIGTTS-EKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTF 229
Query: 262 ---GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G N + P L + SL + G + + LT +G V G G L
Sbjct: 230 GQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCD 375
+ P KV L G K+ QIA G H+ +R I +G G GQLG+G +
Sbjct: 290 SNEIVP-----RKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGN 344
Query: 376 QIHPKVV 382
P++V
Sbjct: 345 HSTPQIV 351
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ + GQLG G +++ P L+ + ++ +ACGG H A++ G +
Sbjct: 167 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK-----SGAI 221
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG ++ YP + + +IS G + S F+++ G +FTCG G
Sbjct: 222 FGWGKNTFGQLGLNDLNSRCYPTQLRTL--RSLGVRYISCGDDFSVFLTNEGGVFTCGAG 279
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
TFGQLGHG + P KV + + QIACG RH+L + ++YGFG G GQL
Sbjct: 280 TFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPS--RGKIYGFGLGGVGQL 337
Query: 214 GVSKDRIRSVSLPQVTIG 231
G+ + + S PQ+ G
Sbjct: 338 GIG--MVGNHSTPQIVRG 353
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 45/274 (16%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
++ G+ G+LG G P K+ V ++ CG H+L L K+ ++Y
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE---GKMYA 59
Query: 205 FGSGKRGQLGVSKD-----RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
G+ GQLG D R R ++T L + I IS S AL+ G +++W
Sbjct: 60 CGNNDHGQLGHDLDTLPNKRPRMSRFKRLT-SLENYIITCISCGTAHSLALTNWGQVFSW 118
Query: 260 GRGFNSTSDV-----NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
G N+ + N Q P + Q A G H L LT +GE+ G + +
Sbjct: 119 GS--NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSY 176
Query: 309 GML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L + E+V P+ ++ +L GV + IA G HS V+++ AI WG
Sbjct: 177 GQLGIGTTSEKV----PMPTLIQ---SLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTF 229
Query: 366 GQLGLGNTCDQIHP-----------KVVNLGDEF 388
GQLGL + + +P + ++ GD+F
Sbjct: 230 GQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDF 263
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
Length = 393
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 175/391 (44%), Gaps = 50/391 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG-----AHVLALTSPSSVIG 90
V SWGAG GQLG G L D LSP + V ++ GG + LA T +
Sbjct: 32 VLSWGAGRTGQLGNGTLSDSLSPASVTSLFRGDVDQMSAGGTSSADSFTLARTDKT---- 87
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
V +WG S+GQLG+G + P V + I+AG H+ + SG +++
Sbjct: 88 --VKAWGHNSAGQLGNGGNTNQAVPTTVPRL----TNVKDIAAGGKHALALDTSGQVYSW 141
Query: 151 GDGTFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
GD ++GQLG+ GD R + P +V QI+ G SL LL++ +VY +G
Sbjct: 142 GDNSYGQLGNNRTGDSR--TVPDRVQGM--PKAKQISAGCDFSLALLEN---GKVYAWGR 194
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G GQLG SV P+ GL D IV I A + A++A+ + +WG
Sbjct: 195 GIHGQLGTGNRATSSV--PRQVTGLED--IVKIDAGCYHALAITADNTVKSWGYNLYGQL 250
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPER 316
G ++T P + S G H +T D V G + +G L +D +
Sbjct: 251 GNSATKSSTVPVDVDWLTDVSDIEAGAWHNYAMTSDSHVYGWGNNQYGQLLEGDQADGDN 310
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S T A ++ L+GV+ +AAGA H VT + + TWG GQLG G T +
Sbjct: 311 ISRTN--RTAPVEIPRLEGVQ--HLAAGARHGVAVTADD-VFTWGNNSEGQLGNGTTVSR 365
Query: 377 IHP-KVVNLGDEFQNRDTQLEVFCGSGFTYA 406
K++ G +N L G TYA
Sbjct: 366 FDSVKILQEGSAIKNVTASL----GGNTTYA 392
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG + GQLG R D + P + + ++ G LAL + GKV
Sbjct: 137 QVYSWGDNSYGQLGNNRTGDSRTVPD--RVQGMPKAKQISAGCDFSLAL-----LENGKV 189
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG GQLG G + P+ VT + I I AG H+ ++ + + G
Sbjct: 190 YAWGRGIHGQLGTGNRATSSVPRQVTGLE----DIVKIDAGCYHALAITADNTVKSWGYN 245
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG+ +S + PV V +V I G H+ + D VYG+G+ + GQL
Sbjct: 246 LYGQLGNSATKSSTVPVDVDWLT--DVSDIEAGAWHNYAMTSDS---HVYGWGNNQYGQL 300
Query: 214 ---------GVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+S+ +R V +P+ +E V A G R ++TWG
Sbjct: 301 LEGDQADGDNISRTNRTAPVEIPR-------LEGVQHLAAGARHGVAVTADDVFTWG 350
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 29/204 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV++WG G GQLGTG P+ ++ L + + G H LA+T+ ++V
Sbjct: 188 KVYAWGRGIHGQLGTGNRATSSVPR--QVTGLEDIVKIDAGCYHALAITADNTVK----- 240
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGDG 153
SWG GQLG+ + P V + ++ I AG W++ SDS ++ G+
Sbjct: 241 SWGYNLYGQLGNSATKSSTVPVDVDWL----TDVSDIEAGAWHNYAMTSDS-HVYGWGNN 295
Query: 154 TFGQLGHGD--------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+GQL GD + ++PV++ + V +A G RH + + D V+ +
Sbjct: 296 QYGQLLEGDQADGDNISRTNRTAPVEIPRL--EGVQHLAAGARHGVAVTAD----DVFTW 349
Query: 206 GSGKRGQL--GVSKDRIRSVSLPQ 227
G+ GQL G + R SV + Q
Sbjct: 350 GNNSEGQLGNGTTVSRFDSVKILQ 373
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 156/333 (46%), Gaps = 29/333 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKV 93
V++ G G +GQLG G SP+LL ++ ++ GG H LAL+S G+V
Sbjct: 1496 VFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSS-----DGEV 1550
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
FSWG G G+LGHG + PK + FF G IT+I AG +HS + +G L+T G G
Sbjct: 1551 FSWGEGEDGKLGHGNRQTSSQPKRIEFFCGK--IITNICAGGSHSAAIGLNGELYTWGKG 1608
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN--QVYGFGSGKRG 211
+G+LGHGD P +V + V +ACG + L C+ N V+ +G G G
Sbjct: 1609 RYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTL---CITNDDNVWSWGDGDYG 1665
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
+LG + +P + L IV + S AL+ G LYTWG+ G +
Sbjct: 1666 KLG--RGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGT 1723
Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
V P + + + + + G H +V T +GEV G + G L D ++ P
Sbjct: 1724 EEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPT 1783
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
L K+ +I+ G+ H+ + ++A
Sbjct: 1784 LNTF-----LLNKKIDRISCGSAHTIAWSTSKA 1811
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 168/392 (42%), Gaps = 32/392 (8%)
Query: 27 EEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
E + V V+ WG QLG + SP L + S +A G +T+
Sbjct: 551 ENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNK- 609
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
GK++S G S G+LG G++ + P+ VT + T + +G NH ++ G
Sbjct: 610 ----GKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
F+ GDG GQLGHG+ S S P + +FV K V I+CG HS ++++ +Y +
Sbjct: 666 LAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVEN---KYLYTW 722
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW--- 259
G G G+LG + ++ P+ +V +S G R A ++ + +++W
Sbjct: 723 GLGDFGRLGHGDE--ETILQPKFVTHFLGYNVVQVSC-GSRDAQTVCITDDDKVWSWGDG 779
Query: 260 -----GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
GRG + + L + G + LT G V G L
Sbjct: 780 DFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHG 839
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+ +P + V L G VI IA GA H VT++ + +WG +HGQLG G T
Sbjct: 840 TDIHVRQP-----KLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETD 894
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ KV NL N + V CGS + A
Sbjct: 895 VK---KVPNLITGLHNHRIKY-VACGSSHSIA 922
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+ + ++ + GG+H A+ + G+++
Sbjct: 1549 EVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIG-----LNGELY 1603
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V +G + +++ +++ GDG
Sbjct: 1604 TWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGD 1663
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+ + K + ++ CG + S+ L K +Y +G G +LG
Sbjct: 1664 YGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTK---YGVLYTWGKGDYYRLG 1720
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ V P + L + + IS + EG +Y WG
Sbjct: 1721 HGTE--EHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWG 1764
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 22/242 (9%)
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLG 199
+D +F G G GQLG G + +SP + S + N+ +I+ G RH L L D
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSD--- 1547
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G+ G+LG +R S ++ I I I A G SAA+ G LYTW
Sbjct: 1548 GEVFSWGEGEDGKLG-HGNRQTSSQPKRIEFFCGKI-ITNICAGGSHSAAIGLNGELYTW 1605
Query: 260 GRG------FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G+G + D P+ + + F + G L +T D V G +G
Sbjct: 1606 GKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYG 1665
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L P+ + +L G ++++ G++ S +T+ + TWG G++ +LG
Sbjct: 1666 KLGRGGSDGCKVPMII-----EDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLG 1720
Query: 370 LG 371
G
Sbjct: 1721 HG 1722
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL----GWN 289
D + V I+ +G A + A G+ G + V P+ L S + + G
Sbjct: 1483 DCDTVCITTDG---ALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGR 1539
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L L+ DGEV G G L R +S++P +++ G + I AG HSA
Sbjct: 1540 HCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP-----KRIEFFCGKIITNICAGGSHSA 1594
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
+ N + TWG G +G+LG G++ DQ+ PK V F L+V CGSG
Sbjct: 1595 AIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFF----FVLDVACGSG 1643
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 159/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + +V + CG H + + G V++
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G +F+ G +G
Sbjct: 59 GCNDLGQLGHDK--SRRKPEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
Q+G + P + S + + Q+ACG HSL L KD + ++ +G + GQLG+
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKD---SDIFSWGQNQYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ I+ P+ L I I+A G S AL+ G ++ WGR G +D
Sbjct: 172 GLE-IKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
N P L S S G +H LT +G V G +G L P
Sbjct: 231 NVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H+ A V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVK 342
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 140/301 (46%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINK--NVRDVGCGSRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + + + ++CG H+L L QV+ +G
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDK---GQVFSWGHAVY 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQ+G+S + +P+ L D++IV ++ S ALS + +++WG+ G
Sbjct: 114 GQIGLSTAE-EYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172
Query: 265 STSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
C SLS F+ A G H LT G + G + G L +
Sbjct: 173 LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNV 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P AL K +L K+I I G +H+A +T+ + T+G G +GQLG +T +++P+
Sbjct: 233 P---ALLK--SLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRK 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G + E +P+ ++ SLS + +A GG H ALT I G
Sbjct: 158 IFSWGQNQYGQLGLGLEIKKECAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WGR GQLG + D P + + I HI G +H+ ++ G +FT G
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQK--IIHICCGEDHTAALTKEGGVFTFGA 268
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QIACG +H+L + ++Y FG G GQ
Sbjct: 269 GGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326
Query: 213 LG 214
LG
Sbjct: 327 LG 328
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V+SWG GQ+G + + P+ N+ SLS V + +ACG H LAL+ S
Sbjct: 104 QVFSWGHAVYGQIGLSTAEEYIRVPR--NIKSLSDVQIVQVACGHHHSLALSKDSD---- 157
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+FSWG+ GQLG G E+ P+ + G + HI+AG HS ++ SG +F
Sbjct: 158 -IFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPF--AHIAAGGGHSFALTISGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D + P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H+ FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTINRKSPFTVK 342
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 5 LMEETEKGKSALINNAKP-KIEE----EEEEQQVVK---VWSWGAGTDGQLGTGRLHDEL 56
L +ET++ AL+ + + KI E+ + K V+++GAG GQLG + E+
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
+P+ + S V+ +ACG H LA PSS G+++S+G G +GQLG G ++ P
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAFV-PSS---GRIYSFGLGGNGQLGTGSTINRKSPF 339
Query: 117 PV 118
V
Sbjct: 340 TV 341
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 157/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V +IA G +H S V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 162/352 (46%), Gaps = 37/352 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG +DGQLG G + P + ++ LS +A G H LA+ + G V++
Sbjct: 153 VWAWGWNSDGQLGDGTTRERHVP--VQVAGLSGGVKVAAGDGHSLAV-----CLDGTVWA 205
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR SGQLG G V P V G + ++AG +HS V G ++ G +
Sbjct: 206 WGRNDSGQLGDGTTVQRSAPVQVAGLSG----VVAVAAGSSHSLAVRSDGTVWAWGRNSD 261
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + +PV+V+ +A GM HSL + D V+ +G RGQLG
Sbjct: 262 GQLGDGTTSARLTPVQVTGLSGGVA--VAAGMFHSLAVRSD---GTVWAWGQNTRGQLG- 315
Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
D + SL P IGL + E V +A S ++G ++ WG RG S
Sbjct: 316 --DGSMTASLTPVQAIGLSEGEAV--AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKT 371
Query: 269 VNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P Q S F+ AA G H L + DG V G + G L D R+ T P+
Sbjct: 372 STAPVQVTALSGGFTVAA-GKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPV---- 426
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V+ L G + +AAG +HS + + + WG GQLG G T + P
Sbjct: 427 -QVTGLSG--GVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAP 475
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 169/378 (44%), Gaps = 39/378 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG +GQ G G +P + +++LS +A G AH LA+ S G V++
Sbjct: 353 VWAWGNNIEGQRGDGSAKTSTAP--VQVTALSGGFTVAAGKAHALAVRSD-----GTVWA 405
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ GQLG G + P VT G ++AG +HS + G ++ G T
Sbjct: 406 WGQNLFGQLGDGTRMQRTAPVQVTGLSGG----VAVAAGDDHSLGLCLDGTVWAWGQNTS 461
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V+ V +A G HSL + D V+ +GS GQLG
Sbjct: 462 GQLGDGTTAQRPAPVQVTEL--SGVVAVAAGTSHSLAVSSD---GTVWAWGSNASGQLGD 516
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R R P GL + V ++A S A+ ++G ++ WG G + +
Sbjct: 517 GTTRARLT--PVQVAGLSGV--VAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQR 572
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P +P AA G+ H LVL DG V G + +G L + +S P+ +
Sbjct: 573 PTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPV-----Q 627
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
V+ L G + +AAG S V + + WG +GQLG G ++ P VN
Sbjct: 628 VTGLSGG--VAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPVGVN------ 679
Query: 390 NRDTQLEVFCGSGFTYAI 407
+ V G+GF+ A+
Sbjct: 680 GLSGGMAVAAGNGFSLAV 697
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 146/351 (41%), Gaps = 35/351 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+ G+ T GQLG G + P + LS ++A G +H LA+ S G ++
Sbjct: 53 VWAAGSNTSGQLGDGTTSERRVPA--QVVGLSDAVLVAAGSSHSLAIRSD-----GTAWA 105
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SG+LG G P VT ++AG HS V G ++ G +
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLS----EAEAVAAGDGHSLVVRSDGTVWAWGWNSD 161
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G R PV+V+ ++A G HSL + CL V+ +G GQLG
Sbjct: 162 GQLGDGTTRERHVPVQVAGLSGG--VKVAAGDGHSLAV---CLDGTVWAWGRNDSGQLGD 216
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
RS P GL +V ++A S A+ ++G ++ WGR G +TS
Sbjct: 217 GTTVQRSA--PVQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSAR 272
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL-SVALE 328
P + A G H L + DG V G + G L D +S P+ ++ L
Sbjct: 273 LTPVQVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIGLS 332
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ +AAG HS V + + WG GQ G G+ P
Sbjct: 333 EGE--------AVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 151/354 (42%), Gaps = 43/354 (12%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W+WG G+LG G P + ++ LS +A G H L + S G V++W
Sbjct: 104 WAWGHNGSGELGDGTTFRRTRP--VQVTGLSEAEAVAAGDGHSLVVRSD-----GTVWAW 156
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G S GQLG G + P V G ++AG HS V G ++ G G
Sbjct: 157 GWNSDGQLGDGTTRERHVPVQVAGLSGG----VKVAAGDGHSLAVCLDGTVWAWGRNDSG 212
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--G 214
QLG G S+PV+V+ V +A G HSL + D V+ +G GQL G
Sbjct: 213 QLGDGTTVQRSAPVQVAGL--SGVVAVAAGSSHSLAVRSD---GTVWAWGRNSDGQLGDG 267
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ R+ V + ++ G V ++A S A+ ++G ++ WG+ +T S
Sbjct: 268 TTSARLTPVQVTGLSGG------VAVAAGMFHSLAVRSDGTVWAWGQ---NTRGQLGDGS 318
Query: 275 LPSSLSFSQA---------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ +SL+ QA A G H LV DG V G + G D +ST P+
Sbjct: 319 MTASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPV-- 376
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V+ L G +AAG H+ V + + WG GQLG G + P
Sbjct: 377 ---QVTALSG--GFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAP 425
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 37/357 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G +P + ++ LS +A G H L L + G V++
Sbjct: 403 VWAWGQNLFGQLGDGTRMQRTAP--VQVTGLSGGVAVAAGDDHSLGL-----CLDGTVWA 455
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ +SGQLG G P VT G + ++AG +HS VS G ++ G
Sbjct: 456 WGQNTSGQLGDGTTAQRPAPVQVTELSG----VVAVAAGTSHSLAVSSDGTVWAWGSNAS 511
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
GQLG G R+ +PV+V+ V +A G HSL + D V+ +G+ QL
Sbjct: 512 GQLGDGTTRARLTPVQVAGL--SGVVAVAAGYFHSLAVRSD---GTVWAWGNNSFFQLGD 566
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSD 268
G + R V +P ++ G V +A S L ++G ++ WG N T++
Sbjct: 567 GTNTQRPTPVRVPGLSGG------VAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTAN 620
Query: 269 VNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ + LS A A G L + DG V G + +G L D + P+
Sbjct: 621 ASFSPVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPVG--- 677
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V+ L G + +AAG S V + WG+ GQLG G + V +L
Sbjct: 678 --VNGLSG--GMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHGGPSVYVTAAVRSL 730
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 132/316 (41%), Gaps = 31/316 (9%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
S LA GG+H LA+ G V++ G +SGQLG G + P V
Sbjct: 35 SRLAAGGSHSLAIRPD-----GTVWAAGSNTSGQLGDGTTSERRVPAQVVGLS----DAV 85
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
++AG +HS + G + G G+LG G + PV+V+ +A G H
Sbjct: 86 LVAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGL--SEAEAVAAGDGH 143
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
SLV+ D V+ +G GQLG R R V P GL V ++A S A
Sbjct: 144 SLVVRSD---GTVWAWGWNSDGQLGDGTTRERHV--PVQVAGLSG--GVKVAAGDGHSLA 196
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
+ +G ++ WGR G +T + P + A G +H L + DG V
Sbjct: 197 VCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAW 256
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + G L D + P+ +V+ L G + +AAG HS V + + WG
Sbjct: 257 GRNSDGQLGDGTTSARLTPV-----QVTGLSG--GVAVAAGMFHSLAVRSDGTVWAWGQN 309
Query: 364 EHGQLGLGNTCDQIHP 379
GQLG G+ + P
Sbjct: 310 TRGQLGDGSMTASLTP 325
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 149/328 (45%), Gaps = 24/328 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G VF WG + GQLG + A P + +I HISA + S FV+DSG L+
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLA--TSIVHISANSDMSAFVTDSGSLYVS 1667
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+LG G +PV++ S + ++ACG H L L ++ +VY +G GK
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEE---KRVYAWGDGKW 1724
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---S 267
G GVS V PQ L I+G+ A G SAALS G L+ WG+ N
Sbjct: 1725 GNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLG 1782
Query: 268 DVNCPQSLPSSLS-----FSQAALGWNH--VLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ + P+ +S +LG NH VL+ + G + +G L + V +
Sbjct: 1783 TTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRS 1842
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
L V LD +++ + GA H+A V++ ++TWG G +GQLGL +
Sbjct: 1843 -----TLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIEN 1897
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
V L D ++V CG T +S
Sbjct: 1898 PVQL--PAICNDPMVKVVCGQEVTIVVS 1923
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 171/413 (41%), Gaps = 72/413 (17%)
Query: 5 LMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQ-LLNL 63
L+ +EK I + K E + E + +++WG G +G+LG G +PQ + +
Sbjct: 1151 LVRYSEKKHFEQIRDRANKRYEVDLEGEY-HIYTWGCGVNGRLGHGFHTGYSTPQEITSF 1209
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD------ALYPKP 117
S + + +ACG H LA + G V++WG G GQLG E D A P+P
Sbjct: 1210 PSNTKIVEVACGCEHSLARS-----FDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQP 1264
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
V + RY I I+ G H+ ++ + + G G FGQLG S +P V +
Sbjct: 1265 V--LNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDG 1322
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
+ +I CG HS +L+ ++ +G GQLG +S S P+V
Sbjct: 1323 RAPCKILCGGWHSAAILES---GKILLWGKNVYGQLG--HGDTKSCSAPRV--------- 1368
Query: 238 VGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
+ L EG + T G G N H LV+
Sbjct: 1369 ---------NQYLRLEGKVRTAGLGAN-------------------------HTLVVMVA 1394
Query: 298 GEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+V +G + G L DP R P+S + L+G + Q+AAG +HS ++
Sbjct: 1395 NKVFAMGSNIDGQLGLDDPSRTGKNVPVS-----IEELNGKNICQVAAGDQHSLALSVFG 1449
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ +WG GQLG D++ P L + + + CG F+ A+S
Sbjct: 1450 EVWSWGGSPFGQLGHETITDKLAP--TPLLERHKIPPDVKSIACGYTFSAAMS 1500
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 143/323 (44%), Gaps = 29/323 (8%)
Query: 36 VWSWGAGTDGQLGTG----RLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
++++G G G+LG G R + + P+ + + SV +ACG ALT
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDT----- 571
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKV++WG+ + G+LG G P D + + IS G NH+ +D F
Sbjct: 572 GKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVW 631
Query: 151 GDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G TFGQLG S+ P +++S N+ IACG H+L+ V G G
Sbjct: 632 GSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNT---GSVMSCGKGW 688
Query: 210 RGQLG---VSKDRIRSVSLP---QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
GQLG S +LP ++ G D IV +SA + SAA++ +G L+TWG+G
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGD 748
Query: 263 -FNSTSDVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ + + ++ P + F ++G +H+L L G G G L E
Sbjct: 749 EYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGE 808
Query: 316 RVS-STRPLSVALEKVSNLDGVK 337
T P + L + DG++
Sbjct: 809 MCERETLPRPIMLCRRGLRDGIE 831
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 161/402 (40%), Gaps = 84/402 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++SWG+G+ G+LG G + SP+ + S V +ACG H A+T+ G V+
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTV-----GDVW 262
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G GQLGH + + P+ + I G +H+ + SG L++ G T
Sbjct: 263 TWGKGLRGQLGHKSVKEEFSPRLNASL--RKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG GD P V+ F N+ V I S+ L +V+ FG+ L
Sbjct: 321 HGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNT---GKVFAFGNETEPHL- 376
Query: 215 VSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYTWGRGFNS-------- 265
+RI P+ GL + I+ ++ A+S G L+ W R F+S
Sbjct: 377 ---NRI-----PRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW-RPFSSEEESSRML 427
Query: 266 -----------------------TSDVNCPQSLPS---SLSFSQ---------------- 283
+ ++ C Q++ S S SFS
Sbjct: 428 ESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKIL 487
Query: 284 AALGWNHVLV-------------LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
ALG N + GDG + G G L + + +++
Sbjct: 488 PALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRI 547
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
L + V+ IA G + +A +T+ + TWG G+LGLG+
Sbjct: 548 ETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGS 589
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 147/321 (45%), Gaps = 30/321 (9%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGKVFSWG 97
G G+LG G H +P + + SL++V ++ ACG H LALT +V++WG
Sbjct: 1668 GGSEHGRLGLG--HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEK-----RVYAWG 1720
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G G G D L P+ ++ +I + AG HS +S G LF G + GQ
Sbjct: 1721 DGKWGNAGVSNTNDVLEPQELSSLAA--CSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQ 1778
Query: 158 LGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LG G + SP K+S+ ++ V ++ G HS VL++ N ++ G GQLG+
Sbjct: 1779 LGLGTTSAAEDSPTKISN-LDGVVMDVSLGANHSAVLMQVTSPN-LFTCGLNANGQLGLG 1836
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS--------TSD 268
D + +L V L D +IV S +AA+S G L TWG G N + D
Sbjct: 1837 -DFVDRSTLTAVD-ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKD 1894
Query: 269 VNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ P LP+ + + G +V++ GE+ M G + + S R V+
Sbjct: 1895 IENPVQLPAICNDPMVKVVCGQEVTIVVSEKGELYMAG--YESTIGLGGNSSRRREFDVS 1952
Query: 327 LEKVSNLDGVKVIQIAAGAEH 347
+V L ++ QIA G+ H
Sbjct: 1953 FREVEGL--IQPTQIAVGSVH 1971
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 137/281 (48%), Gaps = 37/281 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
+V++WG G G G +D L PQ LSSL++ S++ GG H AL+ G
Sbjct: 1715 RVYAWGDGKWGNAGVSNTNDVLEPQ--ELSSLAACSIIGVHAGGFHSAALSQY-----GD 1767
Query: 93 VFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSD--SGCLFT 149
+F WG+ S+GQLG G A P ++ DG + +S G NHS + S LFT
Sbjct: 1768 LFMWGKNSNGQLGLGTTSAAEDSPTKISNLDG---VVMDVSLGANHSAVLMQVTSPNLFT 1824
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
CG GQLG GD+ S+ V + ++ + +CG H+ + + G+ + +G+G+
Sbjct: 1825 CGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQ--YGDLIT-WGNGR 1881
Query: 210 RGQL----GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TW 259
GQL G+SKD V LP + + +V + + + +S +G LY T
Sbjct: 1882 NGQLGLKAGLSKDIENPVQLPAIC----NDPMVKVVCGQEVTIVVSEKGELYMAGYESTI 1937
Query: 260 GRGFNSTS----DVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
G G NS+ DV+ + + + +Q A+G HVL L G
Sbjct: 1938 GLGGNSSRRREFDVSF-REVEGLIQPTQIAVGSVHVLALVG 1977
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 15/232 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWGAG GQLG + +PQ++ + + CGG H A+ GK+
Sbjct: 1291 QVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE-----SGKIL 1345
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG+ GQLGHG+ P+ V + + G NH+ V + +F G
Sbjct: 1346 LWGKNVYGQLGHGDTKSCSAPR-VNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNI 1404
Query: 155 FGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG D + PV + KN+ Q+A G +HSL L + +V+ +G GQ
Sbjct: 1405 DGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLAL---SVFGEVWSWGGSPFGQ 1461
Query: 213 LGVSKDRIRSVSLPQVTIGLHDI--EIVGISANGDRSAALSAEGHLYTWGRG 262
LG + I P + H I ++ I+ SAA+SA+G ++TWG G
Sbjct: 1462 LG--HETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNG 1511
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 32/290 (11%)
Query: 145 GCLFTCGDGTFGQLGHG-DY-RSHSS---PVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
G ++T G G FG+LGHG +Y RS S P ++ + +V IACG + S L D
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACG-KDSTAALTDT-- 571
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYT 258
+VY +G +G+LG+ + ++ +PQ+ L + IS G AA S + H +
Sbjct: 572 GKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISL-GRNHAACSTDMHKFFV 630
Query: 259 WGRGFNSTSDVNCPQ------------SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
WG N+ + P SL + S A GW H L+ T G V+ G
Sbjct: 631 WGS--NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGW-HTLISTNTGSVMSCGKG 687
Query: 307 HHGMLS--DPERVSS-TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
HG L D E +++ ++ L + V +++++AG E SA +T + TWG G
Sbjct: 688 WHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKG 747
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLP 413
+ QLG ++ ++ +P+ V EF + ++V G A+ LP
Sbjct: 748 DEYQLGHESSKNEAYPREV----EFFAKIRVVDVSIGDSHMLALDYSGLP 793
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 40/285 (14%)
Query: 6 MEETE---KGKSALINNAKPKIEEEEEE-------QQVVK---------VWSWGAGTDGQ 46
+E TE + ++AL+ + + ++ EEE E ++ ++ V+ WG G +G+
Sbjct: 43 LENTEGDFRREAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGK 102
Query: 47 LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH 106
LG + P ++ V + A G H L L++ G V S G GQLG
Sbjct: 103 LGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSAD-----GVVLSCGSNVYGQLGM 157
Query: 107 GEMV-----DALYPKPVTFFDGHRYTITH------ISAGWNHSGFVSDSGCLFTCGDGTF 155
G+ + P D + I I+AG+ HS ++D+G +F+ G G++
Sbjct: 158 GDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSW 217
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G + SP V+S N V IACG H+ + +G+ V+ +G G RGQLG
Sbjct: 218 GKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAI--TTVGD-VWTWGKGLRGQLG- 273
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
++ P++ L I D + + G LY+ G
Sbjct: 274 -HKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMG 317
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 21/238 (8%)
Query: 35 KVWSWGAGTDGQ--LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
KV++WG G+ LG+G+ + PQL+ S V ++ G H T K
Sbjct: 573 KVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH-----K 627
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG + GQLG + + P P I I+ G H+ +++G + +CG
Sbjct: 628 FFVWGSNTFGQLGIPH-ISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVH--------QIACGMRHSLVLLKDCLGNQVYG 204
G GQLGHGDY S ++ K + K V +++ G S + +++
Sbjct: 687 GWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK---GRLFT 743
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+G G QLG + ++ + P+ I +V +S AL G Y+WG G
Sbjct: 744 WGKGDEYQLG--HESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNG 799
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F GDG G+LG+ P V +F N V A G +H+L L D + V G
Sbjct: 92 VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGV---VLSCG 148
Query: 207 SGKRGQLGVSK---DRIRSVSLPQVTIGLHDIE--------IVGISANGDRSAALSAEGH 255
S GQLG+ R VS P L ++ IVGI+A S AL+ G
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGK 208
Query: 256 LYTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGS 306
+++WG G S ++ P+ + +SL S+ A G +H +T G+V G
Sbjct: 209 IFSWGSGSWGKLGIGSDANAESPRFV-ASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267
Query: 307 HHGMLSDPERVSSTRP-LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L P L+ +L K +I G +H+ V+ + + + G H
Sbjct: 268 LRGQLGHKSVKEEFSPRLNASLRKCG------AQKIRCGDDHTLVILRSGQLYSMGANTH 321
Query: 366 GQLGLGNTCDQIHPKVV 382
GQLGLG+ D+I P +V
Sbjct: 322 GQLGLGDATDRIIPTLV 338
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G + QLG +E P+ + + V ++ G +H+LAL G +
Sbjct: 740 RLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALD-----YSGLPY 794
Query: 95 SWGRGSSGQLGHGEMVD-ALYPKPVTF 120
SWG GS+GQLGHGEM + P+P+
Sbjct: 795 SWGNGSAGQLGHGEMCERETLPRPIML 821
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+I+ ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 45/333 (13%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGA--HVLALTSPSSVIGG 91
G G+ G+LG G D L LS +S+ + + G+ H LALT G
Sbjct: 543 GEGSYGRLGMGNSDD-----LFTLSPISALQGYVVIQIATSRGSDGHSLALTD-----SG 592
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VFSWG G G+LGHG P+ + G + +++ G+ HS V+ G LFT G
Sbjct: 593 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEE--VVNMACGFKHSAVVTVDGKLFTFG 650
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G +G+LGHG+ + +P +V++ + Q+ACG+ H+LVL D GN V+ FG G G
Sbjct: 651 NGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSAD--GNTVWAFGDGDYG 708
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----------- 260
+LG+ ++ PQ L I I S L+ +G ++++G
Sbjct: 709 KLGLGSCTAKTS--PQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGR 766
Query: 261 -RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
RG + Q+L S +G HVL LT GEV G + G L +
Sbjct: 767 LRGPQKPQQI---QALASHF-IDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQ 822
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P + +L G + QI+AG HSA T
Sbjct: 823 REPCV-----IPDLKGKNIRQISAGRNHSAAWT 850
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 13/231 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V +ACG H +T + GK+F
Sbjct: 593 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVT-----VDGKLF 647
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LGHG + P+ VT + H I ++ G NH+ +S D ++ GDG
Sbjct: 648 TFGNGDYGRLGHGNSANKKTPERVTALEKH--AIGQVACGLNHTLVLSADGNTVWAFGDG 705
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G + +SP + +I CG + S+VL D +V+ FG +
Sbjct: 706 DYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTND---GRVFSFGQER--LT 760
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G + R+R PQ L I + + AL++ G ++ WG +
Sbjct: 761 GQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVD 811
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 11/218 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++++G G G+LG G ++ +P+ + ++ +ACG H L L S G V+
Sbjct: 645 KLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVL----SADGNTVW 700
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G G G+LG G P+ + G I G S +++ G +F+ G
Sbjct: 701 AFGDGDYGKLGLGSCTAKTSPQAIDVLAG--IGCKKICCGTQFSVVLTNDGRVFSFGQER 758
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G R P ++ + + + + G H L L +V+G+G+ GQLG
Sbjct: 759 LTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTST---GEVWGWGNNVDGQLG 815
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ + P V L I ISA + SAA +A
Sbjct: 816 LGHSNAQRE--PCVIPDLKGKNIRQISAGRNHSAAWTA 851
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 73/327 (22%)
Query: 90 GGK--VFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
GGK + WG G GQL G V+ V + + G N + V +G
Sbjct: 485 GGKCDAYLWGGGRHGQLAESGRGVN------VPTVTKSLASAQQVVCGQNCTFVVQVNGT 538
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---HSLVLLKDCLGNQVY 203
+ CG+G++G+LG G+ + +S+ V QIA HSL L +V+
Sbjct: 539 ILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTD---SGEVF 595
Query: 204 GFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+G G G+LG + DR R P+ L E+V +
Sbjct: 596 SWGDGDYGKLGHGNSDRQRR---PRQIEALRGEEVVNM---------------------- 630
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
A G+ H V+T DG++ G +G L + P
Sbjct: 631 ----------------------ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTP 668
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLGNTCDQIHPKV 381
E+V+ L+ + Q+A G H+ V++ + + +G G++G+LGLG+ + P+
Sbjct: 669 -----ERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQA 723
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+++ + ++ CG+ F+ ++
Sbjct: 724 IDVLAGIGCK----KICCGTQFSVVLT 746
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 166/358 (46%), Gaps = 39/358 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G ++ L +S V +A G H +AL++ G V +
Sbjct: 520 VWTWGYNAYGQLGNGTTTQVVT--PTQLPGMSGVIDVAAGVNHTVALSAD-----GTVAA 572
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG+G + L P+ V DG +T ISAG H+ + G ++ G +
Sbjct: 573 WGYNAYGQLGNGTTANQLTPQSVPELDG----VTAISAGSTHTVALKADGTVWAWGSNLY 628
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + SSPV+V S +NV IA G H++ + D ++ +G G +GQLG+
Sbjct: 629 GQLGDGTFTHRSSPVQVPSL--ENVVSIAAGHFHTVAVKGD---GTLWVWGYGPQGQLGL 683
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----- 270
+SV + +G V I+A G + AL A G ++TWG +NS+ +
Sbjct: 684 GTTTNQSVPVQVSGLG----HAVAIAAGGYHTVALLANGQVWTWG--YNSSGQLGDATII 737
Query: 271 ---CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P +P + A G VL DG V G + +G L D S + P + +
Sbjct: 738 QRYSPVLVPGLTNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLM 797
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
V + +++G H + ++ + G+ GQLG G T + P +V NL
Sbjct: 798 NSV--------VDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNL 847
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 158/398 (39%), Gaps = 77/398 (19%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WSWG GQLG G + L P L+ + L+ V L+ G H +AL G + W
Sbjct: 317 WSWGNNAYGQLGDGTTLNRLRPVLV--AGLTGVRALSGGVVHTVALK-----WDGTAWGW 369
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G S+GQLG+G ++ P V I AG H+ G L+ GD +G
Sbjct: 370 GYNSAGQLGNGTTTNSSIPVQVAALT----QAVEIDAGGYHTLARRQDGTLYAWGDNFYG 425
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV---YGFGSGKRGQL 213
LG G+ S S PV+V V G +S+ K QV + +G G+L
Sbjct: 426 ALGTGNTTSSSVPVQVPL---SGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGEL 482
Query: 214 GVSKDRIRSVSLPQVTIGL--------HDIE----------------------------- 236
G R+ V G+ H +
Sbjct: 483 GDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTP 542
Query: 237 --------IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
++ ++A + + ALSA+G + WG G +T++ PQS+P +
Sbjct: 543 TQLPGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVT 602
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQI 341
+ G H + L DG V G + +G L D + P+ V +LE V + I
Sbjct: 603 AISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENV--------VSI 654
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
AAG H+ V + + WG+G GQLGLG T +Q P
Sbjct: 655 AAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVP 692
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 166/364 (45%), Gaps = 40/364 (10%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
++ QV +++WG T+G+LG G SP + +S + A G AH +AL +
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAV---VVSGIVKTAGGSAHSVALGA 516
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
GG V++WG + GQLG+G + P + G + ++AG NH+ +S
Sbjct: 517 -----GGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSG----VIDVAAGVNHTVALSAD 567
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G + G +GQLG+G + +P V V I+ G H++ L D V+
Sbjct: 568 GTVAAWGYNAYGQLGNGTTANQLTPQSVPEL--DGVTAISAGSTHTVALKAD---GTVWA 622
Query: 205 FGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+GS GQLG R V +P + +V I+A + A+ +G L+ WG G
Sbjct: 623 WGSNLYGQLGDGTFTHRSSPVQVPSLE------NVVSIAAGHFHTVAVKGDGTLWVWGYG 676
Query: 263 ------FNSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+T++ + P + S L + A A G H + L +G+V G + G L D
Sbjct: 677 PQGQLGLGTTTNQSVPVQV-SGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDAT 735
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ P V + ++N VI +AAG +AV+ + + +G+ +GQLG G T
Sbjct: 736 IIQRYSP--VLVPGLTN-----VIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTS 788
Query: 376 QIHP 379
+ P
Sbjct: 789 RSSP 792
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 153/355 (43%), Gaps = 33/355 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG + G+LG G L P + + +LS V+ +A G H LA+ G +S
Sbjct: 266 VWTWGINSSGELGDGTTTHSLLP--IQVPNLSGVTNIAAGLWHTLAVKKD-----GSAWS 318
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G ++ L P V G R +S G H+ + G + G +
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLTGVR----ALSGGVVHTVALKWDGTAWGWGYNSA 374
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G + S PV+V++ +I G H+L +D +Y +G G LG
Sbjct: 375 GQLGNGTTTNSSIPVQVAALTQA--VEIDAGGYHTLARRQD---GTLYAWGDNFYGALGT 429
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWGRGFN------STSD 268
SV + G+ + +R A+ H L+ WG N +T+
Sbjct: 430 GNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQ 489
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P ++ S + A G H + L G V G + +G L +
Sbjct: 490 RTSPTAVVVS-GIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQV--------V 540
Query: 329 KVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ L G+ VI +AAG H+ ++ + + WG+ +GQLG G T +Q+ P+ V
Sbjct: 541 TPTQLPGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSV 595
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 22/255 (8%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ V G L+ G+ GQLG+G ++P +V V + G HS
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL--NQVVSASAGAEHS 207
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ + +D V+ +GS GQLG + +R+V P G+ D +V ++A G R+ AL
Sbjct: 208 VAVTED---GSVWTWGSNAYGQLGDGTNTLRAV--PVQVPGMSD--VVAVAAAGSRTVAL 260
Query: 251 SAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
A+G ++TWG G +T+ P +P+ + A G H L + DG G
Sbjct: 261 KADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGSAWSWG 320
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+ +G L D ++ RP+ VA L GV+ ++ G H+ + + WG+
Sbjct: 321 NNAYGQLGDGTTLNRLRPVLVA-----GLTGVRA--LSGGVVHTVALKWDGTAWGWGYNS 373
Query: 365 HGQLGLGNTCDQIHP 379
GQLG G T + P
Sbjct: 374 AGQLGNGTTTNSSIP 388
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 155/373 (41%), Gaps = 38/373 (10%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVL 80
P + E + +W+WG GQLG G+ +P + L+ V + G H +
Sbjct: 151 SPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPT--RVRGLNQVVSASAGAEHSV 208
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
A+T G V++WG + GQLG G + L PV G + +AG
Sbjct: 209 AVTED-----GSVWTWGSNAYGQLGDG--TNTLRAVPVQ-VPGMSDVVAVAAAGSRTVAL 260
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
+D G ++T G + G+LG G P++V + V IA G+ H+L + KD
Sbjct: 261 KAD-GTVWTWGINSSGELGDGTTTHSLLPIQVPNL--SGVTNIAAGLWHTLAVKKD---G 314
Query: 201 QVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
+ +G+ GQL G + +R+R P + GL + +S + AL +G
Sbjct: 315 SAWSWGNNAYGQLGDGTTLNRLR----PVLVAGLTGVR--ALSGGVVHTVALKWDGT--A 366
Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGSHHGM 310
WG G+NS + + SS+ AAL G H L DG + G + +G
Sbjct: 367 WGWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGA 426
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV-VTENRAIMTWGWGEHGQLG 369
L SS+ P+ V L V + AE V + + + WG +G+LG
Sbjct: 427 LGTGNTTSSSVPVQVPLSGVRWFGAGYYYSV---AERKKVNMAQVHTLFAWGHNTNGELG 483
Query: 370 LGNTCDQIHPKVV 382
G T + P V
Sbjct: 484 DGTTTQRTSPTAV 496
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 159/403 (39%), Gaps = 81/403 (20%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W WG + GQLG G + P + +++L+ + GG H LA G +++W
Sbjct: 367 WGWGYNSAGQLGNGTTTNSSIP--VQVAALTQAVEIDAGGYHTLARRQD-----GTLYAW 419
Query: 97 GRGSSGQLGHGEMVDALYPKPVT------FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G G LG G + P V F G+ Y++ ++ LF
Sbjct: 420 GDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAE-----RKKVNMAQVHTLFAW 474
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G T G+LG G +SP V V + + A G HS+ L G V+ +G
Sbjct: 475 GHNTNGELGDGTTTQRTSPTAV---VVSGIVKTAGGSAHSVAL---GAGGAVWTWGYNAY 528
Query: 211 GQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG + + LP ++ ++ ++A + + ALSA+G + WG G
Sbjct: 529 GQLGNGTTTQVVTPTQLPGMS------GVIDVAAGVNHTVALSADGTVAAWGYNAYGQLG 582
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+T++ PQS+P + + G H + L DG V G + +G L D + P
Sbjct: 583 NGTTANQLTPQSVPELDGVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSP 642
Query: 323 LSV-ALEKVSNL------------DG------------------------VKV------I 339
+ V +LE V ++ DG V+V +
Sbjct: 643 VQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLGHAV 702
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
IAAG H+ + N + TWG+ GQLG + P +V
Sbjct: 703 AIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLV 745
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VW+WG + GQLG + SP L+ L++V LA GG L G V+
Sbjct: 719 QVWTWGYNSSGQLGDATIIQRYSPVLV--PGLTNVIALAAGGYTTAVLKRD-----GTVW 771
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G +GQLG G P T + ++ +S+G NH + + CG +
Sbjct: 772 AFGYNPNGQLGDGTTTSRSSPT-ATLMN----SVVDLSSGVNHMMGLRKDAWVRACGYNS 826
Query: 155 FGQLGHGDYRSHSSPVKVSSF 175
GQLG G +PV+V++
Sbjct: 827 AGQLGDGTTTQRPTPVQVTNL 847
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L + G + G + G L + +R P +V L+ +V+ +AGAEHS
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAP-----TRVRGLN--QVVSASAGAEHSV 208
Query: 350 VVTENRAIMTWGWGEHGQLGLG-NTCDQIHPKVVNLGD 386
VTE+ ++ TWG +GQLG G NT + +V + D
Sbjct: 209 AVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD 246
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 163/357 (45%), Gaps = 40/357 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG+ G+LG G L P + + L ++ +A G AH LAL G+V++
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMP--VQVQGLPTIKAIAAGNAHSLALDGT-----GRVWA 221
Query: 96 WGRGSSGQLGHG----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG S+GQLG M+ AL P T +SAG NHS G + G
Sbjct: 222 WGSNSNGQLGDTTAGYRMLPALVPGLTN--------ATGLSAGSNHSLVRQADGTTWVWG 273
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T+GQLG G S S+P +VS V + HSLVL D V+ +GS +RG
Sbjct: 274 ANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSD---GTVWTWGSNQRG 328
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG R V P +GL + V + +G S A+ A G ++TWG G S
Sbjct: 329 QLGDGTQEQRLV--PVQVMGLSGVVAV-AAGSGQHSVAVMANGEVWTWGHNVEGQLGEGS 385
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+S P+ + + + A G H L DG V G + G L D ++ R L
Sbjct: 386 SSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGD--GTTAQRLLPT 443
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ ++N+ + +AAG S + + + WG +GQLG G+T D+ +P V
Sbjct: 444 QVPGLTNM-----VAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQV 495
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 157/356 (44%), Gaps = 38/356 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG G L P Q++ LS + V++ A G H +A+ + G+V+
Sbjct: 319 VWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGV--VAVAAGSGQHSVAV-----MANGEVW 371
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G + PK T ++AG H G ++ GD
Sbjct: 372 TWGHNVEGQLGEGSSSYSAVPKRSHAL----VERTSVAAGRYHGLASKPDGTVWAWGDNA 427
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G P +V N + +A G SL L D V+ +G GQLG
Sbjct: 428 KGQLGDGTTAQRLLPTQVPGLTN--MVAVAAGHHSSLALKAD---GTVWAWGDNANGQLG 482
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ DR +P +T +V I+A + A+ A+G L+TWG G +T
Sbjct: 483 NGSTTDRSNPTQVPGLT------GVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTT 536
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
D P +P A G H LV+ DG V G ++ G L ++ RP+
Sbjct: 537 VDRPIPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGG--GTTTIRPVP-- 592
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ NL GV + I AG HS + + + WG+ HGQLG GNT Q P V
Sbjct: 593 -SQTPNLTGV--VAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQV 645
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 159/353 (45%), Gaps = 36/353 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L D+ P + L ++S + G H LA+ S G V++
Sbjct: 69 VWAWGDNAYGQLGNGSLQDQRVP--VRAWGLWNISAVGAGDLHSLAMKSD-----GTVWT 121
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G P V + ++AG++HS + G ++ G
Sbjct: 122 WGGNNFGQLGDGTTTGRQAPVQVPGLG----EVVRVAAGFSHSLALKTDGTVWAWGSNGA 177
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G PV+V + IA G HSL L D G +V+ +GS GQLG
Sbjct: 178 GRLGDGTTTQRLMPVQVQGL--PTIKAIAAGNAHSLAL--DGTG-RVWAWGSNSNGQLGD 232
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ R LP + GL G+SA + S A+G + WG G +T+
Sbjct: 233 TTAGYR--MLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSR 288
Query: 270 NCPQSLPSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ PQ + S L+ LG H LVL DG V G + G L D + P+
Sbjct: 289 SAPQQV-SGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPV----- 342
Query: 329 KVSNLDGVKVIQIAAGA-EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
+V L G V+ +AAG+ +HS V N + TWG GQLG G++ PK
Sbjct: 343 QVMGLSG--VVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPK 393
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 144/322 (44%), Gaps = 33/322 (10%)
Query: 65 SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
+ S + ++A G H LA+ S G V++WG + GQLG+G + D P
Sbjct: 46 TASRLGLVAAGRHHTLAVRSD-----GTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL--- 97
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+ I+ + AG HS + G ++T G FGQLG G +PV+V V ++A
Sbjct: 98 -WNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGL--GEVVRVA 154
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
G HSL L D V+ +GS G+LG R +P GL I+ I+A
Sbjct: 155 AGFSHSLALKTD---GTVWAWGSNGAGRLGDGTTTQR--LMPVQVQGLPTIKA--IAAGN 207
Query: 245 DRSAALSAEGHLYTWGRGFNST-SDVNC-----PQSLPSSLSFSQAALGWNHVLVLTGDG 298
S AL G ++ WG N D P +P + + + G NH LV DG
Sbjct: 208 AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADG 267
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE-HSAVVTENRAI 357
+ G + +G L D S + P ++VS L GV + GAE HS V+ + +
Sbjct: 268 TTWVWGANTYGQLGDGTTTSRSAP-----QQVSGLAGVDGV---LGAELHSLVLKSDGTV 319
Query: 358 MTWGWGEHGQLGLGNTCDQIHP 379
TWG + GQLG G ++ P
Sbjct: 320 WTWGSNQRGQLGDGTQEQRLVP 341
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 153/355 (43%), Gaps = 37/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG T GQLG G SP +S L+ V LA G HV+ + + G V++
Sbjct: 769 VWAWGDNTYGQLGDGTTLATRSPA--QVSGLTDVEGLAAGEGHVVVVK-----MDGTVWT 821
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G L P V G + ++AG+ HS + G ++ G+ +
Sbjct: 822 WGNNAKGQLGDGTTTRRLVPTQVPGLTG----VVAVAAGYAHSLALKADGTVWGWGENIY 877
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +P + V +A G H L D ++ +G GQLG+
Sbjct: 878 GQLGDGTTTQRVAPTQAQGLTV--VLSMASGTYHGLARKAD---GTLWAWGYNAHGQLGI 932
Query: 216 --SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
+ R+ +P ++ +V +SA S AL +G ++ WG N +T+
Sbjct: 933 GTTTTRLAPTLVPSLS------GVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTT 986
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P PS S + G+ + L + DG V G + G L P VA
Sbjct: 987 TRHVPTQAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVA- 1045
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L+ V + A H+ VV+ + + +G E GQLG G+T ++ P V
Sbjct: 1046 ----GLN--SVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLIRLAPNQV 1094
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G + P + S L G H LA+ + G V++
Sbjct: 620 VWAWGYNLHGQLGNGNTTTQQVPT--QVPGFSGGVSLGAGIYHSLAIKTD-----GSVWT 672
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G P V F G ++ ++AG HS + G + G
Sbjct: 673 WGYNYRGQLGDGTTTSRTTPTQVAGFTG----VSFLAAGEFHSVALRTDGTAWAWGSNDK 728
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G R H +P +S V +A G R + D V+ +G GQLG
Sbjct: 729 GQLGDGSARWHYAPT-LSRLVG--ARGLAAGDRFTAARKSD---GTVWAWGDNTYGQLG- 781
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S QV+ GL D+E G++A + +G ++TWG G +T+
Sbjct: 782 DGTTLATRSPAQVS-GLTDVE--GLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRR 838
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD---PERVSSTRPLSVA 326
P +P A G+ H L L DG V G + +G L D +RV+ T+ +
Sbjct: 839 LVPTQVPGLTGVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQRVAPTQAQGLT 898
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V+ +A+G H + + WG+ HGQLG+G T ++ P +V
Sbjct: 899 V----------VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLV 944
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 161/397 (40%), Gaps = 74/397 (18%)
Query: 35 KVWSWGAGTDGQLGTG----RLHDELSPQLLNLSSLSSVSMLA----------------- 73
+VW+WG+ ++GQLG R+ L P L N + LS+ S +
Sbjct: 218 RVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGANTY 277
Query: 74 --CGGAHVLALTSPSSVIG--------------------GKVFSWGRGSSGQLGHGEMVD 111
G + ++P V G G V++WG GQLG G
Sbjct: 278 GQLGDGTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQ 337
Query: 112 ALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
L P V G + ++AG HS V +G ++T G GQLG G + P
Sbjct: 338 RLVPVQVMGLSG----VVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVPK 393
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQV 228
+ + V + +A G H L D V+ +G +GQL G + R+ +P +
Sbjct: 394 RSHALVERT--SVAAGRYHGLASKPD---GTVWAWGDNAKGQLGDGTTAQRLLPTQVPGL 448
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFS 282
T +V ++A S AL A+G ++ WG N ST+D + P +P
Sbjct: 449 T------NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPGLTGVV 502
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
A G H L + DG + G ++ G L D V RP+ + V+ V+ +A
Sbjct: 503 SIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVD--RPIPTQVPGVTG-----VVSVA 555
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
AG HS VV + + WG GQLG G T + P
Sbjct: 556 AGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVP 592
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 155/396 (39%), Gaps = 68/396 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L P + L+++ +A G LAL + G V++
Sbjct: 420 VWAWGDNAKGQLGDGTTAQRLLPT--QVPGLTNMVAVAAGHHSSLALKAD-----GTVWA 472
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG+G D P V G + I+AG H+ V G L+T GD
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQVPGLTG----VVSIAAGPGHALAVKADGTLWTWGDNNT 528
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G P +V V +A G+ HSLV+ D V+ +GS GQLG
Sbjct: 529 GQLGDGTTVDRPIPTQVPGVTG--VVSVAAGLYHSLVVKVD---GTVWAWGSNYEGQLGG 583
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
IR V P T L +V I+A S AL +G ++ WG G +T+
Sbjct: 584 GTTTIRPV--PSQTPNL--TGVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQ 639
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA-LE 328
P +P G H L + DG V G ++ G L D S T P VA
Sbjct: 640 QVPTQVPGFSGGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFT 699
Query: 329 KVSNL----------------------------DG-------------VKVIQIAAGAEH 347
VS L DG V +AAG
Sbjct: 700 GVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGLAAGDRF 759
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+A + + WG +GQLG G T P V+
Sbjct: 760 TAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVS 795
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 144/355 (40%), Gaps = 38/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
W+WG+ GQLG G +P LS L LA G A S G V++
Sbjct: 720 AWAWGSNDKGQLGDGSARWHYAP---TLSRLVGARGLAAGDRFTAARKSD-----GTVWA 771
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G + P V+ + ++AG H V G ++T G+
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSGLT----DVEGLAAGEGHVVVVKMDGTVWTWGNNAK 827
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G P +V V +A G HSL L D V+G+G GQLG
Sbjct: 828 GQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSLALKAD---GTVWGWGENIYGQLGD 882
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ R+ +T+ ++ +++ A A+G L+ WG G +T+
Sbjct: 883 GTTTQRVAPTQAQGLTV------VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTT 936
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P +PS + H L L DG V G + +G L D + P
Sbjct: 937 TRLAPTLVPSLSGVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVP----- 991
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +L VK + +AG E+S V + + +WG + GQLG G + P V
Sbjct: 992 TQAPSLSSVKAV--SAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQV 1044
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 163/373 (43%), Gaps = 53/373 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G + ++ + VS LA G H +AL + G ++
Sbjct: 670 VWTWGYNYRGQLGDGTTTSRTT--PTQVAGFTGVSFLAAGEFHSVALRTD-----GTAWA 722
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G Y ++ G R ++AG + G ++ GD T+
Sbjct: 723 WGSNDKGQLGDGS-ARWHYAPTLSRLVGAR----GLAAGDRFTAARKSDGTVWAWGDNTY 777
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G + SP +VS + V +A G H +V+ D V+ +G+ +GQLG
Sbjct: 778 GQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVVKMD---GTVWTWGNNAKGQLGD 832
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ R+ +P +T +V ++A S AL A+G ++ WG G +T+
Sbjct: 833 GTTTRRLVPTQVPGLT------GVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTT 886
Query: 268 DVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P Q L LS + H L DG + G + HG L ++TR
Sbjct: 887 QRVAPTQAQGLTVVLSMASGTY---HGLARKADGTLWAWGYNAHGQLG--IGTTTTR--- 938
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP----- 379
+A V +L GV + ++A +HS + + + WG+ +GQLG G T + P
Sbjct: 939 LAPTLVPSLSGV--VSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPS 996
Query: 380 ----KVVNLGDEF 388
K V+ G E+
Sbjct: 997 LSSVKAVSAGFEY 1009
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 166/446 (37%), Gaps = 126/446 (28%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG +GQLG G D +P + L+ V +A G H LA+ + G +++
Sbjct: 470 VWAWGDNANGQLGNGSTTDRSNPT--QVPGLTGVVSIAAGPGHALAVKAD-----GTLWT 522
Query: 96 WGRGSSGQLGHGEMVD------------------ALYPKPVTFFDGHRYT---------- 127
WG ++GQLG G VD LY V DG +
Sbjct: 523 WGDNNTGQLGDGTTVDRPIPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLG 582
Query: 128 ------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
+ I+AG HS + G ++ G GQLG+G+ + P
Sbjct: 583 GGTTTIRPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVP 642
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDC------------LGN----------QVYGF-- 205
+V F + G+ HSL + D LG+ QV GF
Sbjct: 643 TQVPGFSGG--VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTG 700
Query: 206 -----------------------GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
GS +GQLG R +G + A
Sbjct: 701 VSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGL------A 754
Query: 243 NGDR-SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
GDR +AA ++G ++ WG G +T P + A G HV+V+
Sbjct: 755 AGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEGHVVVVK 814
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
DG V G + G L D ++TR L +V L G V+ +AAG HS + +
Sbjct: 815 MDGTVWTWGNNAKGQLGDG---TTTRRL--VPTQVPGLTG--VVAVAAGYAHSLALKADG 867
Query: 356 AIMTWGWGE--HGQLGLGNTCDQIHP 379
+ WGWGE +GQLG G T ++ P
Sbjct: 868 TV--WGWGENIYGQLGDGTTTQRVAP 891
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 26/261 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++AG +H+ V G ++ GD +GQLG+G + PV+ N+ + G HS
Sbjct: 53 VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL--WNISAVGAGDLHS 110
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
L + D V+ +G GQLG + R V +P + E+V ++A S
Sbjct: 111 LAMKSD---GTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLG------EVVRVAAGFSHSL 161
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL +G ++ WG G +T+ P + + A G H L L G G V
Sbjct: 162 ALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGRVWA 221
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + +G L D + R L + ++N G ++AG+ HS V + WG
Sbjct: 222 WGSNSNGQLGD--TTAGYRMLPALVPGLTNATG-----LSAGSNHSLVRQADGTTWVWGA 274
Query: 363 GEHGQLGLGNTCDQIHPKVVN 383
+GQLG G T + P+ V+
Sbjct: 275 NTYGQLGDGTTTSRSAPQQVS 295
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 43/372 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQ-LLNLS---SLSSVSMLACGGAHVLALTSPSSVIG- 90
V+SWG GQLG G ++ P +L+LS + +V + G +H S+VI
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSH-------SAVIAE 53
Query: 91 -GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V++WGRG GQLGH ++V + +P + ++ G NH+ V+D+G ++T
Sbjct: 54 DGDVYTWGRGWEGQLGH-DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYT 112
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ GQLG GD +S +SPV + S +N +V IACG H++ + C+ ++ +G
Sbjct: 113 WGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAI---CIEGTIWSWGRN 169
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
+ GQLG ++ P +G+ + + G + L+ +Y WG G
Sbjct: 170 QCGQLG--HGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLG 227
Query: 263 FNSTSDVNCPQSLPSSLSFSQAA---LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
N + + L S A G++H + L + ++ G + G L S
Sbjct: 228 LNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHS 287
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA---------IMTWGWGEHGQLGL 370
P E V+ L V+V QIA G +H + + +WG GE GQLG
Sbjct: 288 PVP-----ELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGH 342
Query: 371 GNTCDQIHPKVV 382
+ P++V
Sbjct: 343 NELLSRCTPRIV 354
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG+ GQLG R L P +++ S + CG +H +AL ++
Sbjct: 214 KIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNE-----QI 268
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDS-------- 144
++WGR GQLG G + P+ VT R + I+ G++H FV+D
Sbjct: 269 YTWGRNDCGQLGLGHYTHSPVPELVTALRSVR--VQQIACGYDHCVAFVADEVEPGMPPL 326
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSP 169
+++ G G GQLGH + S +P
Sbjct: 327 EHVYSWGRGEEGQLGHNELLSRCTP 351
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS----PSSVIG 90
++++WG GQLG G P+L+ V +ACG H +A + P
Sbjct: 267 QIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPL 326
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPV 118
V+SWGRG GQLGH E++ P+ V
Sbjct: 327 EHVYSWGRGEEGQLGHNELLSRCTPRIV 354
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 19/164 (11%)
Query: 256 LYTWGR------GFNSTSDVNCPQ---SLPSSLSFSQA---ALGWNHVLVLTGDGEVLML 303
+Y+WG+ G T++V P SL L+ G +H V+ DG+V
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G G L + + V ++ +A G H+ VVT+N I TWG
Sbjct: 61 GRGWEGQLGH----DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGEN 116
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ GQLG G+ P ++ D N + L + CG T AI
Sbjct: 117 KAGQLGTGDLKSSNSPVLI---DSALNLPSVLSIACGEFHTVAI 157
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 154/346 (44%), Gaps = 30/346 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG+ G+LG G + DE P+ ++ + + V +ACG + + +T+ G+V
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITN-----DGQV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+S G GQLGH + L P + I+ G H+ V++ G LF+ G
Sbjct: 56 YSCGNNDYGQLGHEKARKRLQLIP----GLDAFVFKKIACGSCHTLAVNEWGQLFSWGCN 111
Query: 154 TFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG + +P V + + QIACG+ HS+ L D ++Y +GS + GQ
Sbjct: 112 MKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTND---GELYSWGSNREGQ 168
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ + + P+ I L + I I+ G + +S G ++ WGR G N T
Sbjct: 169 LGIGSHTVTEIK-PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDT 227
Query: 267 SD--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
V C + AA G + LT DG V G +G L ++ P
Sbjct: 228 QQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILP-- 285
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLG 369
+V L G V QI+ G H+ + +R + WG G GQLG
Sbjct: 286 ---RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ +GQLG G E+ P+ + + ++ +ACGG H + ++ G V
Sbjct: 157 ELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISK-----SGVV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WGR + GQLG + + P + + + + + G S F++ G +FTCG G
Sbjct: 212 FAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAK--VCYAACGEEFSVFLTLDGGVFTCGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG+ + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 270 MYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 327
Query: 214 GVSKDRIRSVSLPQVTIG 231
G RS + P V +G
Sbjct: 328 GNRAS--RSATTPLVVLG 343
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+F WG G+LG G + D P+ V F + + I+ G N++ +++ G +++C
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANE--VEQIACGENYTVTITNDGQVYSC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G+ +GQLGH R + + +FV K +IACG H+L + + Q++ +G
Sbjct: 59 GNNDYGQLGHEKARKRLQLIPGLDAFVFK---KIACGSCHTLAVNE---WGQLFSWGCNM 112
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-------- 261
+GQLG++ + P++ L IV I+ + S AL+ +G LY+WG
Sbjct: 113 KGQLGLNSVDCTERT-PRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGI 171
Query: 262 GFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
G ++ +++ + + +++ + A G H +V++ G V G + G L +
Sbjct: 172 GSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P ++ L KV A G E S +T + + T G G +GQLG GN ++I P+
Sbjct: 232 VPC-----QLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR 286
Query: 381 VV 382
V
Sbjct: 287 QV 288
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG GQLG + E +P+++ S + +ACG H +ALT+ G++
Sbjct: 104 QLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN-----DGEL 158
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+SWG GQLG G V + PK + I I+ G H+ +S SG +F G
Sbjct: 159 YSWGSNREGQLGIGSHTVTEIKPKRIITLAA--VPIAFIACGGYHTVVISKSGVVFAWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
TFGQLG D + P ++ + N V ACG S+ L D V+ G+G GQ
Sbjct: 217 NTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLD---GGVFTCGAGMYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRG 262
LG + LP+ + L + IS + AL + G +Y WG G
Sbjct: 274 LGHGNG--MNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 322
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 131/302 (43%), Gaps = 25/302 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+S G GQLG + L QL+ +ACG H LA+ G++F
Sbjct: 54 QVYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFKKIACGSCHTLAVNE-----WGQLF 106
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG GQLG VD P I I+ G HS +++ G L++ G
Sbjct: 107 SWGCNMKGQLGLNS-VDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNR 165
Query: 155 FGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + + P ++ + + IACG H++V+ K + V+ +G GQL
Sbjct: 166 EGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGV---VFAWGRNTFGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NST 266
G++ + R V P L + ++ + + S L+ +G ++T G G N
Sbjct: 223 GLNDTQQRIV--PCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGM 280
Query: 267 SDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+++ P+ + + + +Q + G H L L G V G G L + S+T PL
Sbjct: 281 NEI-LPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPL 339
Query: 324 SV 325
V
Sbjct: 340 VV 341
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 158/378 (41%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G G G+LG G + P LL V +A GG H LAL+S G
Sbjct: 4006 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 4060
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + PK + G I I+ G +HS ++ +G L+T G
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTE--IVDIACGGHHSAAITSAGWLYTWGK 4118
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD +P + + + V +ACG +L + D + V+ +G G
Sbjct: 4119 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4175
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + +V + S AL+ G +YTWG+G
Sbjct: 4176 GKLG--RGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKG-------- 4225
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4226 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4244
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H T+ + TWG + GQLG G T P++V+ Q
Sbjct: 4245 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVH---ALQG 4301
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 4302 KKIT-RVACGSAHTLAWS 4318
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 171/393 (43%), Gaps = 37/393 (9%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
E + Q V+ WG QLG + P LS L V + GG+ L + S
Sbjct: 2928 EPQPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHI--AGGSKTLFVVSQE 2985
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
GK+++ G G++G+LG G+ + PKP+ F + + +G H+ ++ G
Sbjct: 2986 ----GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGK 3041
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F+ G+G G+LGHG+ S P + S +K + IACG HS + ++Y +G
Sbjct: 3042 VFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 3098
Query: 207 SGKRGQLGVSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
G+ G+LG +S L Q +G I+I A G R A AL+A+G +Y+WG G
Sbjct: 3099 LGEYGRLGHGDTATQSKPKLVQSLVGQRIIQI----ACGSRDAQTMALTADGLVYSWGDG 3154
Query: 263 ----FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
C L + L Q G L LT GEV G + L
Sbjct: 3155 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3214
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+P V L G KVI +A GA H VT+ + WG +HGQ G G T
Sbjct: 3215 NDHHVRKP-----TLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI 3269
Query: 375 DQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
P +V+ L D NR V CGS + A
Sbjct: 3270 VNKKPSLVHELDDARVNR-----VSCGSSHSIA 3297
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 16/230 (6%)
Query: 36 VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG G G+LG G +DE P+L+ +++ +ACG + AL+S G++
Sbjct: 526 VYSWGNGDGGRLGHGDRAWYDE--PKLIEALVEKNITFIACGSTYSAALSS-----NGEL 578
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WGRG+ G+LGHG + + P VT +GH +G + + V+ SG +F+ GDG
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G +P V ++ NV ++ CG + S L +VY +G G+ +L
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA---YGEVYTWGKGEAYRL 695
Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G ++D +R P++ L ++ + AL+ + +Y WGR
Sbjct: 696 GHGNEDHVR---YPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRN 742
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P R ++ G V+ G ++
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYAT 4010
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + V ++A G +H L L + VY +G G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 4067
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG +S DR P++ L EIV I+ G SAA+++ G LYTWG+
Sbjct: 4068 DDGKLGHGNRLSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 4122 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4181
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
P+ K+ +L G+ V+++ G++ S +T + AI TWG G++ +LG G
Sbjct: 4182 GSDGCKIPM-----KIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4236
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4237 HVRRPRKV 4244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + V LP + L + V ++ A++A+G +Y G
Sbjct: 3955 IYGWGHNHRGQLGGLEGA--KVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 4012
Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
G T V P L S + + A+ G H L L+ +G V G G L
Sbjct: 4013 GAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 4072
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R+S RP + + L G +++ IA G HSA +T + TWG G +G+LG G
Sbjct: 4073 GHGNRLSYDRP-----KLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 4127
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK++ +++ ++V CGSG
Sbjct: 4128 DSEDQLTPKLIEALQDYK----VIDVACGSG 4154
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 145/353 (41%), Gaps = 43/353 (12%)
Query: 26 EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSP 85
++ Q +V +WG+ +LG G SP + + + L C ++ L+
Sbjct: 428 QKNHNQTFQEVIAWGSV---KLGNGS-----SPFYYDTIAELGIKQLCCTERALMILS-- 477
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
+ G V+ GS Q + + V KP+ H S G ++ D+
Sbjct: 478 ---VNGNVYMMYYGSETQ--YPQRVYGFSEKPIIMIASH-------SDGTHYLALTQDNS 525
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+++ G+G G+LGHGD + P + + V KN+ IACG +S L + ++Y +
Sbjct: 526 -VYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN---GELYTW 581
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
G G G+LG +V +P + L H + V + ++ ++A G +++WG G
Sbjct: 582 GRGNYGRLGHGNS--DNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGN 639
Query: 263 FNSTSDVNC-----PQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ C P+ + L + A + G LT GEV G L
Sbjct: 640 YGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGN 699
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
P + + K KV ++ G H +TE++ I WG ++GQ+
Sbjct: 700 EDHVRYPKIIDILKTK-----KVKELCVGNLHVLALTEDQLIYGWGRNDYGQI 747
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P +V F K + IA H L L +D N VY +G+G G+LG DR P
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALTQD---NSVYSWGNGDGGRLG-HGDRAW-YDEP 548
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS 280
++ L + I I+ SAALS+ G LYTWGRG ++ +V P +L ++L+
Sbjct: 549 KLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIP-TLVTALN 607
Query: 281 -----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
+ G + L +T G V G ++G L S P + V L
Sbjct: 608 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTP-----KIVDKLLD 662
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ V ++ G + SA +T + TWG GE +LG GN +PK++++
Sbjct: 663 INVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDI 711
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L LT D V G G L +R P + + L + IA G+ +SA
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEP-----KLIEALVEKNITFIACGSTYSA 570
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ N + TWG G +G+LG GN+ + + P +V N + V CGSG
Sbjct: 571 ALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTA----LNGHMVVYVACGSG 619
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 144/289 (49%), Gaps = 25/289 (8%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
HIS G HS +++SG L+T G +GQLG G + + P V S + V+ +ACG H
Sbjct: 40 HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
++V K ++Y FG+G GQLG + + PQ+ I L + + +SA D SAA
Sbjct: 100 TIVCTK---AGRLYSFGAGSDGQLGTGD--AQCATSPQL-INLPEQKYKLLSAGTDHSAA 153
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G LY WG G +T V P+ L S S + G+ H ++T DG++
Sbjct: 154 LTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTF 213
Query: 304 GGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L++ + +T P V E ++ K+ +A G H+AV+++ + T+G
Sbjct: 214 GEKEFGKLGLTEDQLEDTTTPKHV--ESITE----KIKLVACGGAHTAVISDVGNLYTFG 267
Query: 362 WGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G HGQLG G + Q+ P+ V E + + V CG T I+
Sbjct: 268 DGMHGQLGNGPSLLQLSLPQKVARLSEHKCK----YVSCGDNHTAVITE 312
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 123/230 (53%), Gaps = 17/230 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++S+GAG+DGQLGTG SPQL+NL +L+ G H ALT+ G ++
Sbjct: 108 RLYSFGAGSDGQLGTGDAQCATSPQLINLPE-QKYKLLSAGTDHSAALTTD-----GTLY 161
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GS GQLG G PK + F +++ +S G+ H+ V+D G L+T G+
Sbjct: 162 MWGSGSEGQLGLGNTDSVETPKELKF----HSSVSWVSCGYYHTAIVTDDGKLYTFGEKE 217
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FG+LG ++P V S K + +ACG H+ V+ +GN +Y FG G GQ
Sbjct: 218 FGKLGLTEDQLEDTTTPKHVESITEK-IKLVACGGAHTAVISD--VGN-LYTFGDGMHGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
LG ++ +SLPQ L + + +S + +A ++ +G +YT+G G
Sbjct: 274 LGNGPSLLQ-LSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDG 322
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 154/303 (50%), Gaps = 25/303 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++++G+ GQLG G + P + V+++ACG +H + T G+++
Sbjct: 56 RLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTK-----AGRLY 110
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G GS GQLG G+ A P+ + + +Y + +SAG +HS ++ G L+ G G+
Sbjct: 111 SFGAGSDGQLGTGDAQCATSPQLINLPE-QKYKL--LSAGTDHSAALTTDGTLYMWGSGS 167
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ S +P ++ + +V ++CG H+ ++ D ++Y FG + G+LG
Sbjct: 168 EGQLGLGNTDSVETPKELK--FHSSVSWVSCGYYHTAIVTDD---GKLYTFGEKEFGKLG 222
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STS 267
+++D++ + P+ + + +I ++ G +A +S G+LYT+G G + S
Sbjct: 223 LTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLL 281
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPL 323
++ PQ + S + G NH V+T G + G HG L S+ + + +P
Sbjct: 282 QLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEEDFCNIFKPC 341
Query: 324 SVA 326
V+
Sbjct: 342 KVS 344
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 245 DRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSL-----SFSQAALGWNHVLVLTGDGE 299
D A + G ++T+G+ +LPS + G H ++T G
Sbjct: 4 DDDADIPETGAIFTFGKS-------RFADNLPSKFWIRNDKAMHISCGDEHSAIITESGR 56
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G + G L +T+P V K +GV ++ A G H+ V T+ + +
Sbjct: 57 LYTFGSNDWGQLGLGHMKPTTKPGCV---KSLKQEGVNLV--ACGRSHTIVCTKAGRLYS 111
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+G G GQLG G+ P+++NL ++
Sbjct: 112 FGAGSDGQLGTGDAQCATSPQLINLPEQ 139
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV +S S ALS +++WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q++CG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSK---ASEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q + G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+SWG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFSWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG +DGQLG G P+ N+ SLS + + ++CG H LAL+ S
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVSCGYYHSLALSKAS----- 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G + P+ + G + ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 161/393 (40%), Gaps = 86/393 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG L P+++ + + V +A G H AL I G++F
Sbjct: 223 EVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCAL-----AISGELF 277
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WG G S G YP + F ++ ++ G H+ +S SG LFT GD
Sbjct: 278 EWGEGTHSLGVWDDQCQRSQWYPHKL-FGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GTFG LGHGD S + P +V S V +ACG H+ +
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI------------------- 377
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDV 269
+EI+G + + G L+TWG RG SD
Sbjct: 378 ----------------------VEILGTVKSN------APSGKLFTWGDADRGKLGHSDK 409
Query: 270 ------NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPERVS 318
C ++L S F+Q + + LT G V +G HG L D S
Sbjct: 410 ESKLVPTCVKALTDS-DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICS 468
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
PL V +I++G+ H AV+T N + TWG G GQLGLGN D+
Sbjct: 469 VEGPLKTEF----------VREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSS 518
Query: 379 PKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
P +V + D Q++ + CGS FT A+ H
Sbjct: 519 PTLVEALE-----DKQVDSIACGSNFTVAVCLH 546
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 47/257 (18%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL----PQVTIGLHD 234
+V ++CG +H+ ++ K +V+ +G G+LG VS+ P++ L
Sbjct: 204 DVQNVSCGEKHAAIVTKQ---GEVFSWGKEDGGRLG------HKVSVGVLHPKIIESLAF 254
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTS--DVNCPQS--LPSSL-------SFSQ 283
+ I+ + AL+ G L+ WG G +S D C +S P L S +
Sbjct: 255 THVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVK 314
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H +++ G++ G G+L + S RP ++V +L G++V +A
Sbjct: 315 MACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP-----KEVESLKGLRVKAVAC 369
Query: 344 GAEHSAVVTE----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGD-EFQNR 391
G H+A + E + + TWG + G+LG + ++ P V L D +F
Sbjct: 370 GPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDSDFA-- 427
Query: 392 DTQLEVFCGSGFTYAIS 408
+V C T A++
Sbjct: 428 ----QVSCAKALTVALT 440
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSL 275
+VSLP++ +++ +S +A ++ +G +++WG+ G + V P+ +
Sbjct: 190 NVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKII 249
Query: 276 PSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHH--GMLSDPERVSSTRPLSVALEKV 330
SL+F+ A G H L GE+ G H G+ D + S P +
Sbjct: 250 -ESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKL----F 304
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
L+GV V+++A G H+A+++ + + T+G G G LG G+T PK V
Sbjct: 305 GPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVE 357
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
KV++WG GT+GQLG G D SP L+ V +ACG +A+ S+ G
Sbjct: 496 KVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 551
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 158/356 (44%), Gaps = 30/356 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V Q+ACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 GV 215
G
Sbjct: 328 GT 329
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VQDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S + F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLK-------SLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDQ---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 149/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 161/356 (45%), Gaps = 30/356 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E + P+ + +V + CG H + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G +F+ G G
Sbjct: 59 GCNDLGQLGHDKSRKK--PEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAAHG 114
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
Q+G + P + S + + Q+ACG HSL L K+ + +Y +G + GQLG+
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKE---SNIYSWGQNQYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
++ R S P+ L I I+A G S AL+ G ++ WGR G N +D
Sbjct: 172 GSEK-RKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P L S S G +H LT +G V G +G L P
Sbjct: 231 SDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
KV L G V QIA G +H+ A V + I ++G G +GQLG+G+T ++ P +V
Sbjct: 286 RKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + + P+ FF + + G H+GFV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--NVRDVGCGNRHTGFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + + + ++CG H+L L QV+ +G
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDK---GQVFSWGHAAH 113
Query: 211 GQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQ+GVS +D IR +P+ L DI+IV ++ S ALS E ++Y+WG+ G
Sbjct: 114 GQIGVSIAEDYIR---VPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLG 170
Query: 263 FNSTS-DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
S + P+ + S + F+ A G H LT G + G + G L +
Sbjct: 171 LGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ P AL K +L K+I I G +H+A +T+ + T+G G +GQLG + +++P
Sbjct: 231 SDP---ALLK--SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G E +P+ ++ SLS + +A GG H ALT I G
Sbjct: 158 IYSWGQNQYGQLGLGSEKRKESAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQK--IIYICCGEDHTAALTKEGGVFTFGA 268
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QIACG +H+L + ++Y FG G GQ
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326
Query: 213 LGV 215
LG+
Sbjct: 327 LGI 329
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P + F+NKNV + CG RH+ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ L IV +S + AL+ +G +++WG G
Sbjct: 62 DLGQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ D + P+++ S + Q A G +H L L+ + + G + +G L + S
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLG----LGS 173
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ A + +L G+ IAAG HS +T + AI WG + GQLGL + D+ P
Sbjct: 174 EKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDP 233
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ + + + CG T A+++
Sbjct: 234 ALL----KSLRSQKIIYICCGEDHTAALTK 259
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V+SWG GQ+G D + P+ N+ SLS + + +ACG H LAL+ S+
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPR--NIKSLSDIQIVQVACGHHHSLALSKESN---- 157
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++SWG+ GQLG G E P+ + G HI+AG HS ++ SG +F
Sbjct: 158 -IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSG--IPFAHIAAGGGHSFALTISGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D S P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGH--VREGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+++G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G +GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 158/358 (44%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGH--VREGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G +G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
++GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + GQL
Sbjct: 324 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 353
Query: 215 VSKDRIRSVSLPQVTIG 231
DR + + Q+ G
Sbjct: 354 ARADRFKYHIVKQIFSG 370
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 177/389 (45%), Gaps = 50/389 (12%)
Query: 48 GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
G+G D P+ L + L V +ACG H +T G+VFSWG G+LGHG
Sbjct: 286 GSGVQMDSFVPKALESAVLLDVQAIACGRQHAALVTK-----QGEVFSWGEELGGRLGHG 340
Query: 108 EMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYR 164
D +PK F DG + + + ++ G HS V+ SG L+ G FG LG G
Sbjct: 341 VDSDVSHPK---FVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEA 397
Query: 165 SHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
+ P K+ +V ++CG H+ V+ Q++ FG G G LG DRI SV
Sbjct: 398 TQWVPRKLDGPLEGIHVSSVSCGPWHTAVVTS---AGQLFTFGDGTFGVLG-HGDRI-SV 452
Query: 224 SLPQVTIGL-------------HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---- 266
S+P+ L H +V I G +++ + G L+TWG G
Sbjct: 453 SIPREVESLKGLRTMRAACGVWHTAAVVEIMV-GSSNSSNCSSGKLFTWGDGDKCRLGHG 511
Query: 267 -SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + ++L +F Q A G + LT G+V +G +G L +P+ P
Sbjct: 512 DKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQ-ADGMLP 570
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V + + N V ++A GA H AV+T + TWG G +G+LG G+ D+ P VV
Sbjct: 571 TRVEGKLMKNF----VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDADDRNSPSVV 626
Query: 383 NLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+D Q++ + CG+ FT AI H
Sbjct: 627 E-----ALKDKQVKGIVCGTSFTAAICLH 650
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 136/298 (45%), Gaps = 31/298 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG G D P+ ++ +V ++ACG H A+T + G ++
Sbjct: 325 EVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVT-----LSGDLY 379
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVTFFDGHRYTI--THISAGWNHSGFVSDSGCLFTC 150
WG + G LG G P+ + DG I + +S G H+ V+ +G LFT
Sbjct: 380 IWGGNAYNFGLLGCGSEATQWVPRKL---DGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDGTFG LGHGD S S P +V S + ACG+ H+ +++ +G+ +
Sbjct: 437 GDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGK 496
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
++ +G G + +LG R V P L + ++ +AAL+ G +YT
Sbjct: 497 LFTWGDGDKCRLGHGDKEARLV--PTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGS 554
Query: 259 --WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+G+ N +D P + L + A G HV VLT EV G +G L
Sbjct: 555 PVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRL 612
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 133/344 (38%), Gaps = 88/344 (25%)
Query: 91 GKVFSWGRGSSGQL---------GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
G V+ WG G+ + G G +D+ PK + + I+ G H+ V
Sbjct: 263 GDVYIWGEGTGDGILGGGVHRIGGSGVQMDSFVPKALE--SAVLLDVQAIACGRQHAALV 320
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS--LVLLKDCL- 198
+ G +F+ G+ G+LGHG S P V N NV +ACG HS + L D
Sbjct: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYI 380
Query: 199 -GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHL 256
G Y F G LG + + V P+ G L I + +S +A +++ G L
Sbjct: 381 WGGNAYNF-----GLLGCGSEATQWV--PRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+T+ GDG +LG HG +R
Sbjct: 434 FTF------------------------------------GDGTFGVLG---HG-----DR 449
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE------------NRAIMTWGWGE 364
+S + P +V +L G++ ++ A G H+A V E + + TWG G+
Sbjct: 450 ISVSIP-----REVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGD 504
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+LG G+ ++ P V E +V CG T A++
Sbjct: 505 KCRLGHGDKEARLVPTCVATLVE----PNFCQVACGHSLTAALT 544
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 158/378 (41%), Gaps = 69/378 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G G G+LG G + P LL V +A GG H LAL+S G
Sbjct: 3837 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE-----GH 3891
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + PK + G I I+ G +HS ++ +G L+T G
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTE--IVDIACGGHHSAAITSAGWLYTWGK 3949
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD +P + + + V +ACG +L + D + V+ +G G
Sbjct: 3950 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDD---DNVWSWGDGDY 4006
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + +P L + ++ + S AL+ G +YTWG+G
Sbjct: 4007 GKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG-------- 4056
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L G H RP KV
Sbjct: 4057 --------------------------DYHRLGHGTDDH----------VRRP-----RKV 4075
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
+ L G K+I IA G+ H T+ + TWG + GQLG G T P++V+ Q
Sbjct: 4076 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVH---ALQG 4132
Query: 391 RDTQLEVFCGSGFTYAIS 408
+ V CGS T A S
Sbjct: 4133 KKIT-RVACGSAHTLAWS 4149
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 171/393 (43%), Gaps = 37/393 (9%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
E + Q V+ WG QLG + P LS L V + GG+ L + S
Sbjct: 2784 EPQPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHI--AGGSKTLFVVSQE 2841
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
GK+++ G G++G+LG G+ + PKP+ F + + +G H+ ++ G
Sbjct: 2842 ----GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGK 2897
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F+ G+G G+LGHG+ S P + S +K + IACG HS + ++Y +G
Sbjct: 2898 VFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS---SGELYTWG 2954
Query: 207 SGKRGQLGVSKDRIRSV-SLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWGRG 262
G+ G+LG +S L Q +G I+I A G R A AL+A+G +Y+WG G
Sbjct: 2955 LGEYGRLGHGDTATQSKPKLVQSLVGQRVIQI----ACGSRDAQTMALTADGLVYSWGDG 3010
Query: 263 ----FNSTSDVNCPQSL----PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
C L + L Q G L LT GEV G + L
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3070
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+P V L G K+I +A GA H VT+ + WG +HGQ G G T
Sbjct: 3071 NDHHVRKP-----TLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTI 3125
Query: 375 DQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYA 406
P +V+ L D NR V CGS + A
Sbjct: 3126 VNKKPSLVHELDDARVNR-----VSCGSSHSIA 3153
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 36 VWSWGAGTDGQLGTGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG G G+LG G + +DE P+L+ +++ +ACG + AL+S G++
Sbjct: 523 VYSWGNGECGRLGHGNMTWYDE--PKLIEALVEKNITFIACGSTYSAALSS-----NGEL 575
Query: 94 FSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGF-VSDSGCLFTCG 151
++WGRG+ G+LGHG D + P VT +GH G + V+ SG +F+ G
Sbjct: 576 YTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWG 635
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG G+LG G +P V ++ NV ++ CG + S L +VY +G G+
Sbjct: 636 DGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA---YGEVYTWGKGEDY 692
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+LG ++D +R P++ L +I + AL+ + +Y WGR
Sbjct: 693 KLGHGNEDHVR---YPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRN 741
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P R ++ G V+ G ++
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYAT 3841
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + V ++A G +H L L + VY +G G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GHVYSWGEG 3898
Query: 209 KRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
G+LG +S DR P++ L EIV I+ G SAA+++ G LYTWG+
Sbjct: 3899 DDGKLGHGNRLSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G + D P+ + + + + G L +T D V G +G L
Sbjct: 3953 GRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4012
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
P+ K+ +L G+ VI++ G++ S +T + AI TWG G++ +LG G
Sbjct: 4013 GSDGCKIPM-----KIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4067
Query: 375 DQIHPKVV 382
P+ V
Sbjct: 4068 HVRRPRKV 4075
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+YG+G RGQLG + V LP + L + V ++ A++A+G +Y G
Sbjct: 3786 IYGWGHNHRGQLGGLEGA--KVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGY 3843
Query: 262 G------FNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGML 311
G T V P L S + + A+ G H L L+ +G V G G L
Sbjct: 3844 GAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKL 3903
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
R+S RP + + L G +++ IA G HSA +T + TWG G +G+LG G
Sbjct: 3904 GHGNRLSYDRP-----KLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG 3958
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK++ +++ ++V CGSG
Sbjct: 3959 DSEDQLTPKLIEALQDYK----VIDVACGSG 3985
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 133/323 (41%), Gaps = 38/323 (11%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
SP + S + L C V+ L+ + G V+ GS Q +G K
Sbjct: 451 SPVYYDTISELGIKQLCCTERAVIILS-----VNGNVYMMYYGSETQRVYG-----FSEK 500
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
P+T H S G ++ D+ +++ G+G G+LGHG+ + P + + V
Sbjct: 501 PITMIASH-------SDGTHYLALTQDNS-VYSWGNGECGRLGHGNMTWYDEPKLIEALV 552
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
KN+ IACG +S L + ++Y +G G G+LG + + V +P + L+
Sbjct: 553 EKNITFIACGSTYSAALSSN---GELYTWGRGNYGKLG-HGNSDKDVMIPTLVTALNGHM 608
Query: 237 IVGISANGDR---SAALSAEGHLYTWGRGFNST------SDVNCPQSLPSSLSFSQAAL- 286
+V ++ G R + ++A G +++WG G + P+ + L + A +
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVY 668
Query: 287 -GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G LT GEV G L P + + K K+ + G
Sbjct: 669 CGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTK-----KIKDLYIGH 723
Query: 346 EHSAVVTENRAIMTWGWGEHGQL 368
H +TE++ + WG +HGQ+
Sbjct: 724 LHVLALTEDQLVYGWGRNDHGQI 746
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 26/237 (10%)
Query: 171 KVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
+V F K + IA H L L +D N VY +G+G+ G+LG + P++
Sbjct: 493 RVYGFSEKPITMIASHSDGTHYLALTQD---NSVYSWGNGECGRLG--HGNMTWYDEPKL 547
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSLS- 280
L + I I+ SAALS+ G LYTWGRG NS DV P +L ++L+
Sbjct: 548 IEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIP-TLVTALNG 606
Query: 281 --FSQAALGWN---HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
A G L +T G V G +HG L S P + V L
Sbjct: 607 HMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTP-----KIVDKLLD 661
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
+ V ++ G + SA +T + TWG GE +LG GN +PK++++ + +D
Sbjct: 662 INVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKD 718
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGG---AHVLALTSPSSVIG 90
++++WG G G+LG G D + P L+ + V +ACGG L +T+
Sbjct: 574 ELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTA-----S 628
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G VFSWG G+ G+LG G + PK V D + + G S ++ G ++T
Sbjct: 629 GIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLD---INVAKVYCGQQFSAALTAYGEVYT 685
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G +LGHG+ P + K + + G H L L +D L VYG+G
Sbjct: 686 WGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQL---VYGWGRND 742
Query: 210 RGQL 213
GQ+
Sbjct: 743 HGQI 746
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+++G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G +GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 157/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G +G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
++GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSYGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 161/393 (40%), Gaps = 86/393 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG L P+++ + + V +A G H AL I G++F
Sbjct: 288 EVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCAL-----AISGELF 342
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WG G S G YP + F ++ ++ G H+ +S SG LFT GD
Sbjct: 343 EWGEGTHSLGVWDDQCQRSQWYPHKL-FGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GTFG LGHGD S + P +V S V +ACG H+ +
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI------------------- 442
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDV 269
+EI+G + + G L+TWG RG SD
Sbjct: 443 ----------------------VEILGTVKSN------APSGKLFTWGDADRGKLGHSDK 474
Query: 270 ------NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-----SDPERVS 318
C ++L S F+Q + + LT G V +G HG L D S
Sbjct: 475 ESKLVPTCVKALTDS-DFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICS 533
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
PL V +I++G+ H AV+T N + TWG G GQLGLGN D+
Sbjct: 534 VEGPLKTEF----------VREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSS 583
Query: 379 PKVVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
P +V + D Q++ + CGS FT A+ H
Sbjct: 584 PTLVEALE-----DKQVDSIACGSNFTVAVCLH 611
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 47/257 (18%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL----PQVTIGLHD 234
+V ++CG +H+ ++ K +V+ +G G+LG VS+ P++ L
Sbjct: 269 DVQNVSCGEKHAAIVTKQ---GEVFSWGKEDGGRLG------HKVSVGVLHPKIIESLAF 319
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTS--DVNCPQS--LPSSL-------SFSQ 283
+ I+ + AL+ G L+ WG G +S D C +S P L S +
Sbjct: 320 THVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVK 379
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H +++ G++ G G+L + S RP ++V +L G++V +A
Sbjct: 380 MACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP-----KEVESLKGLRVKAVAC 434
Query: 344 GAEHSAVVTE----------NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGD-EFQNR 391
G H+A + E + + TWG + G+LG + ++ P V L D +F
Sbjct: 435 GPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDSDFA-- 492
Query: 392 DTQLEVFCGSGFTYAIS 408
+V C T A++
Sbjct: 493 ----QVSCAKALTVALT 505
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSL 275
+VSLP++ +++ +S +A ++ +G +++WG+ G + V P+ +
Sbjct: 255 NVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKII 314
Query: 276 PSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHH--GMLSDPERVSSTRPLSVALEKV 330
SL+F+ A G H L GE+ G H G+ D + S P +
Sbjct: 315 -ESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKL----F 369
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
L+GV V+++A G H+A+++ + + T+G G G LG G+T PK V
Sbjct: 370 GPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVE 422
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
KV++WG GT+GQLG G D SP L+ V +ACG +A+ S+ G
Sbjct: 561 KVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISG 616
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+I+ ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 182/405 (44%), Gaps = 63/405 (15%)
Query: 36 VWSWGAGTDGQLGTGRL--------HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
V++WG GT GQLG G ++ELSP++L +++ L G H A+
Sbjct: 7 VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKE-- 64
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
GK+++WG QLGHG + P+ V G + I IS G H+G V + G
Sbjct: 65 ---GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIK--IVDISCGEYHTGAVDEEG 119
Query: 146 CLFTCGDG-----TFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCL 198
LFT G G G LGH S P V + V++ V + CG H++ L KD
Sbjct: 120 KLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD-- 177
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
+++ +G+G+ G+LG + +P+ D I ISA D + A++ G +Y+
Sbjct: 178 -GEIWAWGNGEYGRLGNGAS--DNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYS 234
Query: 259 WGRGFNS--------TSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
WG +S T D +++P S+++ +Q + G++H +T DG++ M G
Sbjct: 235 WGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
L + +++ L +I + G ++A ++ + + T+G G
Sbjct: 295 AK----------------LWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGH 338
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
LG G Q+ P +V E NR + + CG A+++
Sbjct: 339 SNCLGHGERKTQLQPLLV----ESLNRYNVVSMTCGYSHMGALTK 379
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 142/330 (43%), Gaps = 27/330 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
K+++WG+ QLG G + ++ P++++ + ++CG H A+ GK
Sbjct: 66 KLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEE-----GK 120
Query: 93 VFSWGRGSS-----GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
+F+WG G S G LGH D P+ V + + G H+ ++ G +
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI 180
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G+G +G+LG+G + P V F ++N+ I+ G + + + +VY +G
Sbjct: 181 WAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH---GEVYSWGI 237
Query: 208 GKRGQL----GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
QL G++ D ++P V L ++ + +SA D +AA++ +G ++ WG
Sbjct: 238 NSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAKL 297
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
++ + G + L+ G + G H L ER + +PL
Sbjct: 298 WLEPH---EMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPL 354
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
V +L+ V+ + G H +T+
Sbjct: 355 -----LVESLNRYNVVSMTCGYSHMGALTK 379
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 31/254 (12%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRS--------HSSPVKVSSFVNKNVHQIACGMRHSLV 192
+S +FT G GT GQLGHG + SP + +F KN+ ++ G HS
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ K+ ++Y +GS + QLG S+P+V L I+IV IS + A+
Sbjct: 61 IDKE---GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDE 117
Query: 253 EGHLYTWGRGFNSTS-----------DVNCPQSLPS----SLSFSQAALGWNHVLVLTGD 297
EG L+TWG G ++ D + P+ + + + G H + LT D
Sbjct: 118 EGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD 177
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
GE+ G +G L + + P E V + I+AG + + +TE+ +
Sbjct: 178 GEIWAWGNGEYGRLGNGASDNFEVP-----EPVEYFADENIASISAGRDFTFAITEHGEV 232
Query: 358 MTWGWGEHGQLGLG 371
+WG H QLGLG
Sbjct: 233 YSWGINSHSQLGLG 246
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+I+ ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 161/382 (42%), Gaps = 67/382 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV+ G + G+LG SP+ + S + +A GG H +AL+ + GK
Sbjct: 2646 KVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALS-----LDGK 2700
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V SWG G G+LGHG+++ PK + R + +I+ G HS ++ G L+T G
Sbjct: 2701 VLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKR--VFYIACGSAHSAAITSDGELYTWGQ 2758
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LGH D S +P V FV KN+ Q+ACG R + L D GN VY +G G G+
Sbjct: 2759 GQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGN-VYSWGDGDFGK 2817
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG + PQ L +V I S AL+A G ++TWG+G
Sbjct: 2818 LG--RGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKG---------- 2865
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
+ + LG G H RP V K+
Sbjct: 2866 -------EYYRLGLG----------------RGEH-----------VRRPTLVNQLKLVT 2891
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNR 391
+D IA G H V+ + WG +HGQ G G T P++V N + NR
Sbjct: 2892 ID-----HIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNIKINR 2946
Query: 392 DTQLEVFCGSGFTYAISRHCLP 413
V CGS + A LP
Sbjct: 2947 -----VGCGSSQSIAWKCPVLP 2963
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G PQL+ S + +ACGG H A++ G ++
Sbjct: 3653 EVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISR-----YGHLY 3707
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D LYPK V + +G + V+ +++ GDG
Sbjct: 3708 TWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGD 3767
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LGH S P K+ S K + QI CG + S+ L +Y +G G +LG
Sbjct: 3768 YGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVAL---SANGTLYTWGKGDYFRLG 3824
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S + +R P+ GL +IV S AL+ +G +Y WG
Sbjct: 3825 HGSSEHVRK---PKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWG 3868
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 188/432 (43%), Gaps = 65/432 (15%)
Query: 12 GKSALINNAKPKIEEEEEEQQVVKV----WSWGAGTDGQLGTGRLHDELSPQLLNLSSLS 67
G+ INN K E +E+ Q + W+ G +GQ+ H+ QL + S
Sbjct: 3506 GEHIFINNLKFTKEHDEQLLQWLNSKPDDWNMTWGGNGQVVYVWGHNHRG-QLACMDSSQ 3564
Query: 68 SVSMLACGGAHVLALTSPSSVIGG-----------KVFSWGRGSSGQLGHGEMVDALYPK 116
LAC VL P+ VIGG KV++ G SG+LG G + P
Sbjct: 3565 VKKPLACDSLSVL---KPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPY-NPKNPY 3620
Query: 117 PVT--FFDGHRYTI-THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
VT G I +++G H +S +G ++ GDG G+LG G+ +HS P V
Sbjct: 3621 VVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQ 3680
Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
S +K + IACG HS + + +Y +G G+ G+LG P++ GL
Sbjct: 3681 SLSDKCIIDIACGGFHSAAISR---YGHLYTWGKGRYGRLG--HGDYEDYLYPKLVQGLI 3735
Query: 234 DIEIVGISA-NGD-RSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS--------- 280
+ +V ++ +GD ++ ++++ ++++WG G N +S LP +
Sbjct: 3736 NYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQ 3795
Query: 281 ------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
FS AL N L G G+ LG HG E V +P VS L
Sbjct: 3796 IDCGSQFS-VALSANGTLYTWGKGDYFRLG---HG---SSEHVRKPKP-------VSGLQ 3841
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
G K++Q + G+ H +T++ + WG + GQLG G P+ + + + Q
Sbjct: 3842 GKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPI---AALKGKRIQ 3898
Query: 395 LEVFCGSGFTYA 406
+V CGS ++A
Sbjct: 3899 -QVSCGSAHSFA 3909
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 48/315 (15%)
Query: 93 VFSWGRGSSGQLG-----------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
V+ WG GQLG E + AL KP+ G + V
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTAL--KPIEIVGGSKSLF-----------IV 2641
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCL 198
S+ G +F CGD + G+LG SSP ++ S FV K V + G +H++ L L
Sbjct: 2642 SNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTV-AVHSGGKHAMAL---SL 2697
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
+V +G G+ G+LG I ++ P++ L + I+ SAA++++G LYT
Sbjct: 2698 DGKVLSWGDGEDGKLG--HGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYT 2755
Query: 259 WGRG----FNSTSDVN--CPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
WG+G + +V+ P+ + + + +Q A G L L +G V G
Sbjct: 2756 WGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDF 2815
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L P +KV L G +V+QI GA+ S +T + TWG GE+ +L
Sbjct: 2816 GKLGRGGSDGCCTP-----QKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRL 2870
Query: 369 GLGNTCDQIHPKVVN 383
GLG P +VN
Sbjct: 2871 GLGRGEHVRRPTLVN 2885
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 29/248 (11%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+V+SWG G LGHG+ + P+P+ F + + +S G + V++ G L+
Sbjct: 511 GEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFS--KLIVVMVSCGKDFCAAVTEDGKLYM 568
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+G++ H ++ P V S +V +++CG + L L + Y F
Sbjct: 569 -----WGKILHSSNCCYT-PELVKSISEWHVSKVSCGSSINNTL---ALSREGYVFSFEY 619
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
R D+ +V +P + + D EIV I + D +A + +++TWGR G
Sbjct: 620 RNSDRGCDDKSLNV-IPSMIV--FDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGH 676
Query: 264 NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N++ VN P+ + S + +L +++L LT G+V G D E + R
Sbjct: 677 NNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWGQ------LDNENTTQCR 730
Query: 322 PLSVALEK 329
P+ + +
Sbjct: 731 PVKCLMNR 738
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+VY +G + G LG + + S P+ + + +V +S D AA++ +G LY WG
Sbjct: 512 EVYSWGVNEFGALGHGQ-KYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWG 570
Query: 261 RGFNSTSDVNCPQSLPSSLS---FSQAALG--WNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+ +S++ P+ L S+S S+ + G N+ L L+ +G V + +
Sbjct: 571 KILHSSNCCYTPE-LVKSISEWHVSKVSCGSSINNTLALSREGYVFSFE------YRNSD 623
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
R + L+V + + +++ I + +AV+ + TWG G + LG N+
Sbjct: 624 RGCDDKSLNVIPSMI--VFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFR 681
Query: 376 QIHPKVVNL 384
PK V
Sbjct: 682 VNRPKEVKF 690
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
VF+WGRG++ LGH PK V F G + +T +S ++ ++D+G ++
Sbjct: 660 ANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQ--VTSLSLADDYILALTDTGQVY- 716
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+GQL + + + PVK +N+ V +IAC
Sbjct: 717 ----CWGQLDNEN-TTQCRPVKC--LMNRQVKKIACS 746
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+I+ ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+I+ ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+I+ ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 105/370 (28%), Positives = 167/370 (45%), Gaps = 44/370 (11%)
Query: 36 VWSWGAGTDGQLGT------GRLHDELS---PQLLNLSSLSSVSMLACGGAHVLALTSPS 86
++SWG T+GQ+G L ++ P+L+ + V+ +ACG H +A+T
Sbjct: 1502 MFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAIT--- 1558
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G V +WG S QLG GE + +P P+ I +S G H+ +
Sbjct: 1559 --YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALT----NIQSVSCGSEHTLALDYI 1612
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G +F+ G+G G LGHG+ SP + + NV I CG HSLVL K+ QVY
Sbjct: 1613 GQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKN---RQVYS 1669
Query: 205 FGSGKRGQLGVSKDRIRS----VSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTW 259
+G + GQLG+ K + ++ P+ G L + ++ I+A S AL+ G +Y W
Sbjct: 1670 WGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGW 1729
Query: 260 GRGFN---------STSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHG 309
G N T V PQ +P + G N L + E + + + +
Sbjct: 1730 GYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLGLEKEPIKITSTTNN 1789
Query: 310 MLSDPERVSSTRPLSVAL--EKVSNLDGVKVIQIAAGAEHS--AVVTENRAIMTWGWG-- 363
+L + R ++ +K+ + V+ ++ G HS VV + + M + WG
Sbjct: 1790 ILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMH 1849
Query: 364 EHGQLGLGNT 373
+HGQLG+G T
Sbjct: 1850 KHGQLGIGET 1859
Score = 98.6 bits (244), Expect = 5e-18, Method: Composition-based stats.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 58/294 (19%)
Query: 91 GKVFSWGRGSSGQLGH---------GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
G +FSWG+ + GQ+G+ + + +PK + +T ++ G+ HS +
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKD--TIVTSVACGYQHSVAI 1557
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
+ +G + GD + QLG G+ S P N+ ++CG H+L L D +G Q
Sbjct: 1558 TYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLAL--DYIG-Q 1614
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V+ +G+G+ G LG + + P++ L + + I G S L+ +Y+WGR
Sbjct: 1615 VFSWGNGEGGLLGHGNEDV--CPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGR 1672
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
LG + L + L+ P+RV
Sbjct: 1673 N-------------------EGGQLGIDKKLFT-----------NEKCYLTTPKRVK--- 1699
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
NL+GV VIQIAAG HS + N + WG+ +GQ+GLG D
Sbjct: 1700 ---------GNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTD 1744
Score = 61.6 bits (148), Expect = 7e-07, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 120/291 (41%), Gaps = 39/291 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G LG G SP+++ +V + CGG H L LT +V+
Sbjct: 1614 QVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTK-----NRQVY 1668
Query: 95 SWGRGSSGQLG------HGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCL 147
SWGR GQLG E PK V +G + I+AG HS ++ +G +
Sbjct: 1669 SWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEG--VGVIQIAAGEAHSLALALNGQV 1726
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+ G GQ+G G ++ + PV + NK CG+ S L L +
Sbjct: 1727 YGWGYNMNGQIGLG-MQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQL---GLEKEPIK 1782
Query: 205 FGSGKRGQLGVSK--DRIRSVS---LPQVTIGLHDIEIVGISANGDRSAAL----SAEGH 255
S L K D+ R+V+ +P+ H I ++ +S + S AL +
Sbjct: 1783 ITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYM 1842
Query: 256 LYTWG---RGFNSTSDVNCPQSLPSSLSFSQ------AALGWNHVLVLTGD 297
L+ WG G + S+P +++ Q A G H LV+ D
Sbjct: 1843 LFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVAND 1893
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
+ A G+ H + +T G VL G + H L E+ S+ P + ++N+ V
Sbjct: 1545 TSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSV----- 1599
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ G+EH+ + + +WG GE G LG GN PK++
Sbjct: 1600 SCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKII 1640
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S + F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLK-------SLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 157/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 ANTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDQ---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWGR NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGR--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 148/337 (43%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGANTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGRNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ + A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ + GGAH AL+ + G V
Sbjct: 157 QFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 157/356 (44%), Gaps = 34/356 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VWSWG DGQLG G D+L+P L L+ SV G H + L ++ V+
Sbjct: 419 RVWSWGDNEDGQLGNGIGADKLTPALTGLTGAVSV---VAGNRHTVVLKGDTT-----VW 470
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S G++G G + P V G IT ISAG HS + G ++ G
Sbjct: 471 AWGVNSRGEVGDGTNANTSQPVRVLGLSG----ITAISAGAYHSLALRTDGTVWAWGFNR 526
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG+G + PV+V+ V IA G HSL L D V+ +G GQ+G
Sbjct: 527 YGQLGNGGTVDQNQPVQVAGL--SGVTAIAAGHSHSLALCGD---GTVWAWGYNFDGQIG 581
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ LP +GL + I+A G S AL ++G +++WG G + +
Sbjct: 582 SGTNNWH--ILPVQAVGLS--SVTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALAS 637
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+N P + + A G H L L DG V G + G + D + P+ VA
Sbjct: 638 LNAPGPVSNLTGVVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVA-- 695
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ G V+ + AG HS + + WG GQLG G D I P V L
Sbjct: 696 ---GMSG--VVSVIAGDHHSMAMRSDGTTWAWGANTEGQLGDGTRNDSIIPVRVEL 746
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 156/353 (44%), Gaps = 43/353 (12%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W+WG T GQLG G P + L+ V G H LA+ S G V++W
Sbjct: 272 WTWGLNTMGQLGDGTTTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSD-----GAVWAW 323
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G QLG+G M +L P G IT + AG+ HS + G +++ GD FG
Sbjct: 324 GDNRYRQLGNGNMTSSLLPIQAGLSGG----ITLV-AGFKHSLTLRADGTVWSWGDNVFG 378
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--G 214
QLG G Y+ SPV+V++ N +A G HS + +D G +V+ +G + GQL G
Sbjct: 379 QLGDGTYQPRMSPVRVATTTLGN-PGVASGQLHS--VYRDSAG-RVWSWGDNEDGQLGNG 434
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----N 270
+ D++ P +T + +V G+R + +G W G NS +V N
Sbjct: 435 IGADKLT----PALTGLTGAVSVVA----GNRHTVV-LKGDTTVWAWGVNSRGEVGDGTN 485
Query: 271 CPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
S P + + + G H L L DG V G + +G L + V +P+ VA
Sbjct: 486 ANTSQPVRVLGLSGITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVA 545
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L GV IAAG HS + + + WG+ GQ+G G I P
Sbjct: 546 -----GLSGVTA--IAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNWHILP 591
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 153/355 (43%), Gaps = 37/355 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G + SP + + +L+ +A G +H LAL S G V+
Sbjct: 70 SVWAWGFNRQGQLGNGLFTN--SPTPVKVKNLTDAVAVASGDSHSLALRSD-----GTVW 122
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SGQLG G + P V G + +++G+ HS + G ++ GD
Sbjct: 123 AWGDNYSGQLGTGSTAVSAEPVQVQGLSG----VLSVASGFAHSAALRSDGTVWAWGDNR 178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+ QLG S S PV+V V +A G +L L D V+ +G + GQLG
Sbjct: 179 YRQLGPLTAGSSSVPVQVPGL--GGVIAVAAGGNTTLALRAD---GTVWAWGDNRSGQLG 233
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----N 270
+ + P +GL +V +SA AL + G +TW G N+ +
Sbjct: 234 --DGTVTTRGNPLQVLGL--TGVVTLSAGASHCVALRSNGTAWTW--GLNTMGQLGDGTT 287
Query: 271 CPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+S+P+ + + A G H L + DG V G + + L + SS P+ L
Sbjct: 288 TQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGL 347
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
I + AG +HS + + + +WG GQLG G ++ P V
Sbjct: 348 S--------GGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRV 394
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 113/268 (42%), Gaps = 22/268 (8%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R ++ +S G HS V G ++ G GQLG+G + + +PVKV + + +A
Sbjct: 49 RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKVKNLTDAVA--VA 106
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
G HSL L D V+ +G GQLG + + P GL + + +++
Sbjct: 107 SGDSHSLALRSD---GTVWAWGDNYSGQLGTGSTAVSAE--PVQVQGLSGV--LSVASGF 159
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
SAAL ++G ++ WG G + + P +P A G N L L DG
Sbjct: 160 AHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVPVQVPGLGGVIAVAAGGNTTLALRADG 219
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V G + G L D + PL V L V+ ++AGA H + N
Sbjct: 220 TVWAWGDNRSGQLGDGTVTTRGNPLQV-------LGLTGVVTLSAGASHCVALRSNGTAW 272
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
TWG GQLG G T + P V L D
Sbjct: 273 TWGLNTMGQLGDGTTTQRSVPAQVGLTD 300
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 32/323 (9%)
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
L+ +SV+ L+ G H + + S G V++WG GQLG+G ++ P PV +
Sbjct: 46 LAGRASVARLSLGQYHSVGVHSD-----GSVWAWGFNRQGQLGNGLFTNS--PTPVKVKN 98
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
+++G +HS + G ++ GD GQLG G + PV+V V
Sbjct: 99 --LTDAVAVASGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGL--SGVLS 154
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+A G HS L D V+ +G + QLG S S+P GL ++ ++A
Sbjct: 155 VASGFAHSAALRSD---GTVWAWGDNRYRQLG--PLTAGSSSVPVQVPGLGG--VIAVAA 207
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
G+ + AL A+G ++ WG G + + P + + G +H + L
Sbjct: 208 GGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGVVTLSAGASHCVALRS 267
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+G G + G L D + P V L V+ AG HS V + A
Sbjct: 268 NGTAWTWGLNTMGQLGDGTTTQRSVPAQVGL--------TDVMAAVAGNYHSLAVRSDGA 319
Query: 357 IMTWGWGEHGQLGLGNTCDQIHP 379
+ WG + QLG GN + P
Sbjct: 320 VWAWGDNRYRQLGNGNMTSSLLP 342
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG GQLG G L +P +S+L+ V +A G H LAL S G V +
Sbjct: 619 VWSWGYNGSGQLGNGALASLNAPG--PVSNLTGVVSIAAGDYHSLALRSD-----GTVRA 671
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G + + P V G + + AG +HS + G + G T
Sbjct: 672 WGFNFDGQIGDGSLTNRHVPVMVAGMSG----VVSVIAGDHHSMAMRSDGTTWAWGANTE 727
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLG G PV+V F
Sbjct: 728 GQLGDGTRNDSIIPVRVELF 747
>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Anolis carolinensis]
Length = 409
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 177/413 (42%), Gaps = 50/413 (12%)
Query: 26 EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALT 83
E E +++WGA + GQLG G D PQ+L L + +V + GG H LT
Sbjct: 2 EVPREAPAQALFTWGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLT 61
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
G++F G+ +GQLG G D + K + G ++ ++ GW+ + ++
Sbjct: 62 DT-----GELFLCGQNKNGQLGLGHTEDVTHFKLCSSLCG--CSVIQVACGWDFTIILAG 114
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
SG +F+CG +FGQLG S+ K + + V +A G+RH+L + ++ V+
Sbjct: 115 SGQVFSCGSNSFGQLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHALAVTEN---GSVF 171
Query: 204 GFGSG-----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
+G G KR G P GL D + +++ + AL+ EG LY
Sbjct: 172 QWGIGMSSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYV 231
Query: 259 WGRG-----FNSTSDVNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
WG N V PQ + + + GW H++ T G+V G + +G
Sbjct: 232 WGNNKHKQLVNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYG 291
Query: 310 ML--------------SDPERVSSTRPL-SVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
L + S PL S AL V L G QIA G+EH+ +
Sbjct: 292 QLGRSGLPYEQMGQDGKASDENSVKEPLHSPAL--VPALTGAS--QIACGSEHNLAIVGG 347
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ +WGW EHG G G + P+ +++ + L V CG+G + A
Sbjct: 348 QCF-SWGWNEHGMCGNGTEANVCAPQPLDV----LSSAKLLYVGCGAGHSMAF 395
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 28/334 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG+ G+LG G + +E ++P+ ++ S ++V ACGG+H L LT G
Sbjct: 1 MALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTK-----DG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTC 150
K+++ G GQLGH + L K F Y +T +S G +HS +++ G LF+
Sbjct: 56 KLYTCGNNDHGQLGHD--TNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSW 113
Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G GQLGH D S+ +P + S K V QI+CG H L L +++ +G+ +
Sbjct: 114 GSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN---SGELFAWGANE 170
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG+ + V + L I I I+ G+ S A+S G ++ WG+ G
Sbjct: 171 YGQLGLGTTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N P L + SL + G + + LT +G V G G L +
Sbjct: 230 NDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL 289
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V L G K+ QIA G +H+ +R
Sbjct: 290 P-----RMVFELMGSKITQIACGRKHTLAFVPSR 318
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++ WG G+LG G + + P + + G +H+ ++ G L+TCG+
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH + + P +S+ N V Q++CG+ HSL L Q++ +GS G
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTN---WGQLFSWGSNATG 119
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG D + S P++ + +V IS AL+ G L+ WG G +
Sbjct: 120 QLGHDLDMV-SYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178
Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
T +L SL+ + A G NH ++ G + G + G L + S P
Sbjct: 179 TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP 238
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ L + V I+ G + S +T+ + T G G GQLG G ++I P++V
Sbjct: 239 -----TQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV 293
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G G+LG G +P ++ NV Q ACG H+L+L KD ++Y
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKD---GKLYT 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G+ GQLG + + + PQ L + + +S S AL+ G L++WG N
Sbjct: 60 CGNNDHGQLGHDTNNLPN-KRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGS--N 116
Query: 265 STSDVN---------CPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
+T + P+ + S + + Q + G +H L LT GE+ G + +G L
Sbjct: 117 ATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLG- 175
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ +T V +L G+ + IA G HS V+++ AI WG GQLGL +
Sbjct: 176 ---LGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232
Query: 374 CDQIHP-----------KVVNLGDEFQNRDTQ 394
+ +P + ++ GD+F TQ
Sbjct: 233 DSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 157/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T+N + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 157/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT +G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ + GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ +G +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKNGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----NGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +QIAAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 159/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG H+L L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHNLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ +V++P+V L+ I+ +S S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 150/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +H+ +SD G LF+ G G+ GQLG + + P +
Sbjct: 78 IGALADQH---IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG HSL L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHSLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 27/332 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
V++ G GQ G G + ++ + LS + ++M+A G H+LA+ S G
Sbjct: 523 VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIV-INMVAAANGCEHMLAVAS-----DG 576
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+SWG GQLG G + + + +Y IT + ++HS VS +G L G
Sbjct: 577 AVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG 636
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG + +P V S ++ + ++ACG+ H++ + G +VY FG G
Sbjct: 637 MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITS---GGEVYSFGKNDYG 693
Query: 212 QLGVSKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLG+ R ++ +L + ++G D +IV +S + +S +G L TWGR G
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753
Query: 265 STSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV--SST 320
S N Q +P LS A+ G H L+L +G V++ G ++ G L R S+
Sbjct: 754 SKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSAD 813
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
PL V ++N +V++IAAG S ++T
Sbjct: 814 LPLPVPSNSLAN---DEVVRIAAGFYSSYILT 842
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 26/306 (8%)
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
L S +S ++FS G+ + G+L G + V FF I I+ G V
Sbjct: 460 LLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAK--AIRDIAGGNEVLAVV 517
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSH---SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
G +FTCG GQ G+G + ++PV+ S + N+ A G H L + D
Sbjct: 518 MKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASD-- 575
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLY 257
VY +G RGQLG+ I P++ L + I + + SA +S+ G L
Sbjct: 576 -GAVYSWGYNDRGQLGLGST-ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELL 633
Query: 258 TWGR------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+G G + T + PQ L SLS ++ A G H + +T GEV G + +
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQ-LVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDY 692
Query: 309 GMLSDPERVSSTRPLSVALEKVSNL--DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L + R + V ++L K++ ++ G H+ ++E ++TWG ++G
Sbjct: 693 GQLG----LGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYG 748
Query: 367 QLGLGN 372
QLG+G+
Sbjct: 749 QLGIGS 754
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 26/280 (9%)
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
D LF+CG +G+L G S S V F K + IA G V++KD V
Sbjct: 467 DDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKD---GAV 523
Query: 203 YGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ G K GQ G ++R+ ++ P + I +V + + A++++G +Y+WG
Sbjct: 524 FTCGLNKSGQCGNGTFEERV-IIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWG 582
Query: 261 R------GFNST-SDVNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
G ST S + P+ SL + AA+ ++H V++ +GE+LM G + G
Sbjct: 583 YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQ 642
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L P + V +L + ++A G H+ +T + ++G ++GQLGL
Sbjct: 643 LGLDHTQHQHTP-----QLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGL 697
Query: 371 GNTCDQIHPKVV--NLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+ + P +V +LG ++ + + V CG T IS
Sbjct: 698 GHARNMKVPTLVKTSLG---ESDEKIVAVSCGYYHTVTIS 734
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+ +WG GQLG G + S Q + L S + +CG H L L S G+V
Sbjct: 738 KLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMS-----NGRVM 792
Query: 95 SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGC 146
+GR + GQLG G + A P PV + I+AG+ S + S GC
Sbjct: 793 VFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGC 849
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S + F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLK-------SLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 163/358 (45%), Gaps = 39/358 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG + GQLG G L L P + + L V+ +A GG H+ A G +++
Sbjct: 896 LWTWGLNSYGQLGGGPLSYRLLP--VQVQGLMDVTAMAAGGYHMAAAGQD-----GTLWT 948
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQLG G + L P V ++T ++AG H G L+T G ++
Sbjct: 949 WGLNSYGQLGGGPLSYRLLPVQVQGL----MSVTAMAAGGYHMAAAGQDGTLWTWGLNSY 1004
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V V IA G H+L + +D V+ +G GQLG
Sbjct: 1005 GQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQD---GTVWSWGGNAYGQLG- 1060
Query: 216 SKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
D + SL V + GL + ISA + AL +G ++ WGR G +T+
Sbjct: 1061 --DGTTAQSLTPVQVQGL--TGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTH 1116
Query: 269 VNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P Q L ++ + +L H + L DG V G + G L D P+
Sbjct: 1117 RATPVQVQGLTGVIAIAAGSL---HTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPV-- 1171
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L GV I IAAG+ H+ + ++ + WG+ + GQLG G T ++ P V
Sbjct: 1172 ---QVQGLTGV--IAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQ 1224
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 157/350 (44%), Gaps = 31/350 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG + GQLG G L L+P + + L+ V+ +A G +H LA+ G V+S
Sbjct: 996 LWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQD-----GTVWS 1050
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G +L P V G +T ISAG H+ + G ++ G ++
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLTG----VTAISAGDAHTVALRRDGTVWAWGRNSW 1106
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G ++PV+V V IA G H++ L +D V+ +G GQLG
Sbjct: 1107 GQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQD---GTVWAWGRNSWGQLGD 1161
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R+ P GL ++ I+A + AL +G ++ WG G +T+
Sbjct: 1162 GTTTHRAT--PVQVQGL--TGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRR 1217
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + A G+ H + DG G + G L D P+ +
Sbjct: 1218 LTPAQVQGLTGVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPV-----Q 1272
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V L GV + AAG H+ VV E+ + WG QLG G++ D+ P
Sbjct: 1273 VQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTP 1320
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 153/354 (43%), Gaps = 35/354 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG DGQLG G SP + ++ + +A G H +A + G V++
Sbjct: 94 VWAWGNNDDGQLGDGTTTRRFSP----VQVMTGATAIAAGIYHTVAASQD-----GTVWT 144
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR SSGQLG G + P V G +T ++AG NHS + G ++T GD
Sbjct: 145 WGRNSSGQLGDGTSIQRFSPVQVQGLTG----VTAVAAGRNHSAALGQGGTVWTWGDNLV 200
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V V I+ ++ L +D V+ +G+ GQLG
Sbjct: 201 GQLGDGTSTQRLTPVQVQGLT--GVIAISANDSETVALRQD---GTVWAWGNNSSGQLGD 255
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+R P +GL + I+A G + AL +G L+ WG G +T
Sbjct: 256 GTTTVRFT--PVQVLGL--TGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGS 311
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P+ + + A H + L DG + G + G L D P+ +
Sbjct: 312 YRPEQVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPV-----Q 366
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V L GV IAAG ++ ++ + WG E GQLG G T ++ P V
Sbjct: 367 VQGLTGVTA--IAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQ 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 166/357 (46%), Gaps = 37/357 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG + GQLG G L L P + + L SV+ +A GG H+ A G +++
Sbjct: 946 LWTWGLNSYGQLGGGPLSYRLLP--VQVQGLMSVTAMAAGGYHMAAAGQD-----GTLWT 998
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQLG G + +L P V + I+AG++H+ V G +++ G +
Sbjct: 999 WGLNSYGQLGGGPLSQSLTPVQVQVQG--LTGVAAIAAGFSHTLAVRQDGTVWSWGGNAY 1056
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V V I+ G H++ L +D V+ +G GQLG
Sbjct: 1057 GQLGDGTTAQSLTPVQVQGLTG--VTAISAGDAHTVALRRD---GTVWAWGRNSWGQLGD 1111
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R+ P GL ++ I+A + AL +G ++ WGR G +T+
Sbjct: 1112 GTTTHRAT--PVQVQGL--TGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHR 1167
Query: 270 NCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P Q L ++ + +L H + L DG V G + G L D ++TR L+ A
Sbjct: 1168 ATPVQVQGLTGVIAIAAGSL---HTVALRQDGTVWAWGFNDLGQLGDG---TTTRRLTPA 1221
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L GV I AAG H+A V ++ TWG+ GQLG G D+ P V
Sbjct: 1222 --QVQGLTGVTTI--AAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQ 1274
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 155/350 (44%), Gaps = 33/350 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG+ + GQLG G P+ + L+ V+ +A G H +AL G +++
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYRPE--QVQGLTGVTAIAASGIHTVALRQD-----GTLWA 344
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SSGQLG G P V G +T I+AG+ ++ G ++ GD +
Sbjct: 345 WGNNSSGQLGDGTTTVRFTPVQVQGLTG----VTAIAAGYLYTVASKQDGTVWAWGDNEW 400
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V V IA G +++ +D V+ +G KR QLG
Sbjct: 401 GQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYTVASKQD---GTVWAWGDNKRSQLG- 454
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + P GL I I+A+ + A+ +G ++ WG G +T+
Sbjct: 455 -EGAVSQRHTPGEVQGLEGITA--IAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTRR 511
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + A H++ + DG V G G L D + + P+ +
Sbjct: 512 LTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPV-----Q 566
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V L GV I AAG+ H+ + ++ + WG+ +GQLG G T + P
Sbjct: 567 VQGLTGVTAI--AAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTP 614
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 159/352 (45%), Gaps = 37/352 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG GQLG G L+P + + L+ V+ ++ G AH +AL G V++
Sbjct: 1048 VWSWGGNAYGQLGDGTTAQSLTP--VQVQGLTGVTAISAGDAHTVALRRD-----GTVWA 1100
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR S GQLG G P V G + I+AG H+ + G ++ G ++
Sbjct: 1101 WGRNSWGQLGDGTTTHRATPVQVQGLTG----VIAIAAGSLHTVALRQDGTVWAWGRNSW 1156
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G ++PV+V V IA G H++ L +D V+ +G GQLG
Sbjct: 1157 GQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQD---GTVWAWGFNDLGQLG- 1210
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
R ++ QV GL + I+A +AA+ +G +TWG G + +D
Sbjct: 1211 DGTTTRRLTPAQVQ-GLTGVTT--IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDR 1267
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + S A G+ H +V+ DG V G + L + + P+ +
Sbjct: 1268 ATPVQVQGLTGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPV-----Q 1322
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH--GQLGLGNTCDQIHP 379
V L G +AAG H+ ++ + A WGWG + GQ+G G T D+ P
Sbjct: 1323 VEALTGA--FSLAAGRFHTVAMSPDGA--GWGWGRNNLGQVGDGTTADRPTP 1370
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 158/356 (44%), Gaps = 37/356 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L+P + + L+ V+ +A H++A+ G V++
Sbjct: 492 VWAWGDNARGQLGDGTTTRRLTP--VQVQGLAGVTAVAASDYHLVAVRQD-----GTVWA 544
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G GQLG G +D P V G +T I+AG NH+ + G ++ G +
Sbjct: 545 WGVGFWGQLGDGTGMDRSTPVQVQGLTG----VTAIAAGSNHTVALRQDGTVWAWGFNNY 600
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G H +PV+V IA G H++ LL+D V+ +G GQLG
Sbjct: 601 GQLGDGTTAGHLTPVQVPGVTGAVA--IAAGGSHTVALLQD---GTVWTWGYNIWGQLGD 655
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SDVNCP 272
R P GL D ++ I+ N + A+ +G ++TW G NS+ D
Sbjct: 656 GTTTHRHS--PVQVQGLAD--VIAIATNNGHTVAVRQDGTVWTW--GLNSSGQLGDGTTT 709
Query: 273 QSLPS----SLSFSQAAL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
Q L L+ + A L + + + D + G +H G L D P+
Sbjct: 710 QRLTPVQVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPV---- 765
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L + V +AAG H A ++ + TWG +GQLG G ++ P V
Sbjct: 766 -QVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 818
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 148/354 (41%), Gaps = 41/354 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L+P + + L+ V+ +A G + +A S G V++
Sbjct: 392 VWAWGDNEWGQLGDGTTTRRLTP--VQVQGLTGVTAIAAGYLYTVA-----SKQDGTVWA 444
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG QLG G + P V +G IT I+A + V G ++ GD
Sbjct: 445 WGDNKRSQLGEGAVSQRHTPGEVQGLEG----ITAIAASNLLTVAVRQDGTVWAWGDNAR 500
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G +PV+V V +A H + + +D V+ +G G GQLG
Sbjct: 501 GQLGDGTTTRRLTPVQVQGL--AGVTAVAASDYHLVAVRQD---GTVWAWGVGFWGQLGD 555
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN--- 270
DR V + +T + I+A + + AL +G ++ WG FN+ +
Sbjct: 556 GTGMDRSTPVQVQGLT------GVTAIAAGSNHTVALRQDGTVWAWG--FNNYGQLGDGT 607
Query: 271 -----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P +P A G +H + L DG V G + G L D P+
Sbjct: 608 TAGHLTPVQVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPV-- 665
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L VI IA H+ V ++ + TWG GQLG G T ++ P
Sbjct: 666 ---QVQGL--ADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTP 714
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 151/358 (42%), Gaps = 35/358 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG + GQLG G L+P + + L+ + + + +A+ ++ ++
Sbjct: 692 VWTWGLNSSGQLGDGTTTQRLTP--VQVHGLTDATAILTSSSQTVAMRQDRTL-----WA 744
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G L P V +T ++AG H G L+T G ++
Sbjct: 745 WGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSY 800
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G PV+V + IA G H++ + +D V+ +GS GQLG
Sbjct: 801 GQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQD---GTVWAWGSNFSGQLG- 856
Query: 216 SKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN---- 270
D + SL V + + + ++ ++A G AA +G L+TW G NS +
Sbjct: 857 --DGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTW--GLNSYGQLGGGPL 912
Query: 271 ----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P + + + A G H+ DG + G + +G L PLS
Sbjct: 913 SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG-------PLSYR 965
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L V + V +AAG H A ++ + TWG +GQLG G + P V +
Sbjct: 966 LLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQV 1023
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 143/343 (41%), Gaps = 40/343 (11%)
Query: 52 LHDELSPQLLNLSSLSSVS--MLACG-GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L +P L ++ ++ + +LA G G H LA+ G V++WG GQLG G
Sbjct: 55 LSKRTAPGLQGANAFAAPAGPVLAAGNGNHTLAVRQD-----GTVWAWGNNDDGQLGDGT 109
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
PV G T I+AG H+ S G ++T G + GQLG G S
Sbjct: 110 TTRRF--SPVQVMTG----ATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFS 163
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLP 226
PV+V V +A G HS L + G V+ +G GQL G S R+ V +
Sbjct: 164 PVQVQGLT--GVTAVAAGRNHSAALGQ---GGTVWTWGDNLVGQLGDGTSTQRLTPVQVQ 218
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLS 280
+T ++ ISAN + AL +G ++ WG G +T+ P +
Sbjct: 219 GLT------GVIAISANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTG 272
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ A G + L DG + G + G L + S RP E+V L GV
Sbjct: 273 VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRP-----EQVQGLTGVTA-- 325
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
IAA H+ + ++ + WG GQLG G T + P V
Sbjct: 326 IAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQ 368
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GKVF 94
W+WG GQLG G D +P + + L+ VS LA G AH + V+G G V+
Sbjct: 1249 WTWGFNLWGQLGDGTFTDRATP--VQVQGLTGVSALAAGYAHTV-------VVGEDGTVW 1299
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S QLG+G D P V G ++AG H+ +S G + G
Sbjct: 1300 AWGNNSGTQLGNGSSTDRSTPVQVEALTGAF----SLAAGRFHTVAMSPDGAGWGWGRNN 1355
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQ+G G +PV V
Sbjct: 1356 LGQVGDGTTADRPTPVNV 1373
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 4 PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
P+ + G SAL + E+ VW+WG + QLG G D +P + +
Sbjct: 1270 PVQVQGLTGVSALAAGYAHTVVVGEDG----TVWAWGNNSGTQLGNGSSTDRSTP--VQV 1323
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
+L+ LA G H +A+ SP G + WGR + GQ+G G D P PV
Sbjct: 1324 EALTGAFSLAAGRFHTVAM-SPD----GAGWGWGRNNLGQVGDGTTAD--RPTPVNVM 1374
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 143/294 (48%), Gaps = 32/294 (10%)
Query: 36 VWSWGAGT---DGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
VWSWG + G G E PQ +N ++S+V+ +ACGG+H LAL G
Sbjct: 565 VWSWGRNSVGQLGLGTGGTYSTENRPQKIN--AISNVAAIACGGSHSLALARD-----GS 617
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+SWG GQLG G+ V P+ V + ++AG HS ++ G L++ GD
Sbjct: 618 FWSWGYNYYGQLGLGDNVSKTTPRKVNALS----NVVAMAAGDRHSLALTLDGSLWSWGD 673
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T+GQLG GD ++P KV++ NV IA G RHSL L +D V+ +G+ RGQ
Sbjct: 674 NTYGQLGLGDNDHRNTPRKVNAI--SNVVAIAAGYRHSLALTRD---GSVWSWGNNTRGQ 728
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------- 264
LG+ + R+ P TI I I+ + S A+S EG ++ WG +
Sbjct: 729 LGLGDNDDRNTPQPVTTIS----NIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTH 784
Query: 265 -STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
S +D N PQ + + + G +H + LT DG + G + G ++ E +
Sbjct: 785 GSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIAAEEAI 838
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 37/319 (11%)
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG---HGEMVDALYPKPVT 119
+ +L + +A G H LAL G V+SWG S GQLG G P+ +
Sbjct: 1029 VDALPPAAKIAAGDNHALALAPD-----GSVWSWGYNSDGQLGLGSSGTYSTKNRPQKIN 1083
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
+ I+ G +HS V+ G L++ G +GQLG GD S ++P KV++ N
Sbjct: 1084 AIS----NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAI--SN 1137
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V IA G +SL L +D V+ +G GQLG+ + R+ PQ L + +
Sbjct: 1138 VAAIAAGEYYSLALTRD---GSVWSWGDNSDGQLGLGDNEDRNT--PQKVEVLSN--VAA 1190
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
I+A D S AL+ +G +++WGR G + D N PQ + + + A G +H
Sbjct: 1191 IAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFA 1250
Query: 294 LTGDGEVLMLGGSHHGML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
++ +G G ++ G L + + P V + +SN V+ ++ G HS
Sbjct: 1251 ISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKV--ISN-----VVGLSGGNYHSLA 1303
Query: 351 VTENRAIMTWGWGEHGQLG 369
+TE+ A+ WG + GQ+G
Sbjct: 1304 LTEDGALWAWGDNDDGQIG 1322
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 163/363 (44%), Gaps = 47/363 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG GQLG G ++ N+ +L + +A GG H LAL S G V+S
Sbjct: 513 VWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHALALASD-----GSVWS 567
Query: 96 WGRGS---SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGR S G G P+ + + I+ G +HS ++ G ++ G
Sbjct: 568 WGRNSVGQLGLGTGGTYSTENRPQKINAIS----NVAAIACGGSHSLALARDGSFWSWGY 623
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG GD S ++P KV++ NV +A G RHSL L D ++ +G GQ
Sbjct: 624 NYYGQLGLGDNVSKTTPRKVNAL--SNVVAMAAGDRHSLALTLD---GSLWSWGDNTYGQ 678
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ + R+ I +V I+A S AL+ +G +++WG G
Sbjct: 679 LGLGDNDHRNTPRKVNAIS----NVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDN 734
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL--------MLGGSHHGMLSDPERVS 318
D N PQ + + + A+G N+ + ++ +G V LG HG L+D
Sbjct: 735 DDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLAD----- 789
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P V + +SN V+ ++AG+ HS +TE+ A+ WG E GQ+ + I
Sbjct: 790 ENTPQKVIV--ISN-----VVGLSAGSSHSIALTEDGALWAWGNNEAGQIAAEEAIEYID 842
Query: 379 PKV 381
V
Sbjct: 843 NPV 845
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 157/363 (43%), Gaps = 39/363 (10%)
Query: 19 NAKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC 74
NA+P + + +K VW WG QLG G + L+P+ + +S++ +A
Sbjct: 67 NAEPMVASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPV--VSNIVSVAA 124
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G LAL S G +++WG GQLG G+ + L P + I+ G
Sbjct: 125 GRLFSLALASD-----GSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLS----DVAAIAGG 175
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
H+ + SG ++ G GQLG GD+ +PV+V+ NV +A G SL L
Sbjct: 176 DYHALAATQSGEVWAMGRNDHGQLGFTGDHAD--APVQVAGL--SNVKSVAAGEFFSLAL 231
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
D V+ +G+ + QLG +V+ P L +I I+A + AL+ +
Sbjct: 232 KND---GTVWAWGNNESAQLGTGI-AGEAVATPAPIAVLSNI--TAIAAGRRHAMALAED 285
Query: 254 GHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
G ++ WG GF P + S + A GW H L LT DG + G +
Sbjct: 286 GSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNG 345
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G L +S + L + +SN + A G HS + + ++ +WG +GQ
Sbjct: 346 DGRLG--TDATSDQSLPAQVSSISN-----AVSFAGGQRHSLAIAADGSVWSWGGNAYGQ 398
Query: 368 LGL 370
LG+
Sbjct: 399 LGV 401
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 145/314 (46%), Gaps = 36/314 (11%)
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--VDALYPKPVTFFDGHRYTI 128
M+A GG LAL + G ++SWG +GQLG G V+ P V
Sbjct: 985 MVAAGGNFSLALKTD-----GSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALP----PA 1035
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIAC 185
I+AG NH+ ++ G +++ G + GQLG G Y + + P K+++ NV IAC
Sbjct: 1036 AKIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAI--SNVAAIAC 1093
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G HSL + +D ++ +G GQLG+ + ++ PQ + ++ I+A
Sbjct: 1094 GGSHSLAVARD---GSLWSWGYNYYGQLGLGDNYSKTT--PQKVNAISNV--AAIAAGEY 1146
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
S AL+ +G +++WG G D N PQ + + + A G +H L LT DG
Sbjct: 1147 YSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGS 1206
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G + G L + P + V+ + +K I AAG HS ++E
Sbjct: 1207 VWSWGRNSRGQLGLDDNDDRNTP-----QPVTTISNIKAI--AAGNSHSFAISEEGLAWA 1259
Query: 360 WGWGEHGQLGLGNT 373
WG+ GQLG+G +
Sbjct: 1260 WGYNYDGQLGIGTS 1273
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 136/300 (45%), Gaps = 38/300 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G + L+P LS V+ +A G H LA T G+V++
Sbjct: 138 LWAWGGNYYGQLGMGDNDNRLTPS--KTPGLSDVAAIAGGDYHALAATQS-----GEVWA 190
Query: 96 WGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
GR GQLG G+ DA PV + ++AG S + + G ++ G+
Sbjct: 191 MGRNDHGQLGFTGDHADA----PVQV--AGLSNVKSVAAGEFFSLALKNDGTVWAWGNNE 244
Query: 155 FGQLG---HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
QLG G+ + +P+ V S N+ IA G RH++ L +D V+ +G+ G
Sbjct: 245 SAQLGTGIAGEAVATPAPIAVLS----NITAIAAGRRHAMALAED---GSVWAWGANGSG 297
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG + P L D+ I++ S AL+++G L+ WG G ++
Sbjct: 298 QLGFGD--FETPKAPGRVSSLADV--TAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDA 353
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
TSD + P + S + A G H L + DG V GG+ +G L V S P SV
Sbjct: 354 TSDQSLPAQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG----VESLTPASV 409
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 166/379 (43%), Gaps = 53/379 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG DG+LGT D+ P +SS+S+ A G H LA+ + G V+S
Sbjct: 338 LWAWGNNGDGRLGTDATSDQSLPA--QVSSISNAVSFAGGQRHSLAIAAD-----GSVWS 390
Query: 96 WGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAG------W------------- 135
WG + GQLG + A PV T + G + + + + G W
Sbjct: 391 WGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAANIWDDDDDGDGFLDES 450
Query: 136 NHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
++ VS+ G GDGT F GD+ S N N +A G SL L
Sbjct: 451 DNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQP--GFSGCGNPN-PMVAAGGGFSLAL 507
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
D V+ +G+ GQLG+ V P L I+A G + AL+++
Sbjct: 508 KTD---GSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP--LAASIAAGGGHALALASD 562
Query: 254 GHLYTWGRG---------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +++WGR + S N PQ + + + + A G +H L L DG G
Sbjct: 563 GSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLALARDGSFWSWG 622
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+++G L + VS T P V +SN V+ +AAG HS +T + ++ +WG
Sbjct: 623 YNYYGQLGLGDNVSKTTPRKV--NALSN-----VVAMAAGDRHSLALTLDGSLWSWGDNT 675
Query: 365 HGQLGLGNTCDQIHPKVVN 383
+GQLGLG+ + P+ VN
Sbjct: 676 YGQLGLGDNDHRNTPRKVN 694
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 133/319 (41%), Gaps = 33/319 (10%)
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
M+A H LAL G V+ WGR QLG G+ ++ L P+ I
Sbjct: 71 MVASRLDHSLALKGD-----GTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVS 121
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++AG S ++ G L+ G +GQLG GD + +P K +V IA G H+
Sbjct: 122 VAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGL--SDVAAIAGGDYHA 179
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L + +V+ G GQLG + D + P GL +++ V +A S AL
Sbjct: 180 LAATQ---SGEVWAMGRNDHGQLGFTGDHADA---PVQVAGLSNVKSV--AAGEFFSLAL 231
Query: 251 SAEGHLYTWGRGFNST-------SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
+G ++ WG ++ V P + + + A G H + L DG V
Sbjct: 232 KNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAW 291
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + G L + + P +VS+L V IA+G HS +T + + WG
Sbjct: 292 GANGSGQLGFGDFETPKAP-----GRVSSL--ADVTAIASGWFHSLALTSDGVLWAWGNN 344
Query: 364 EHGQLGLGNTCDQIHPKVV 382
G+LG T DQ P V
Sbjct: 345 GDGRLGTDATSDQSLPAQV 363
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGS--SGQLGHGEMVDALYPKPVTFFDGHRYTI 128
M+A GG LAL + G V+SWG LG GE D P V
Sbjct: 496 MVAAGGGFSLALKTD-----GSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALP----LA 546
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTF---GQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I+AG H+ ++ G +++ G + G G Y + + P K+++ NV IAC
Sbjct: 547 ASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI--SNVAAIAC 604
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
G HSL L +D + +G GQLG+ + ++ P+ L + +V ++A
Sbjct: 605 GGSHSLALARD---GSFWSWGYNYYGQLGLGDNVSKTT--PRKVNALSN--VVAMAAGDR 657
Query: 246 RSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
S AL+ +G L++WG G N P+ + + + A G+ H L LT DG
Sbjct: 658 HSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGS 717
Query: 300 VLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V G + G L D + ++ +P++ +SN + IA G +S ++E +
Sbjct: 718 VWSWGNNTRGQLGLGDNDDRNTPQPVTT----ISN-----IKAIAVGNNYSIAISEEGLV 768
Query: 358 MTWGWGEHGQLGL---GNTCDQIHPKVV 382
WG+ GQLG+ G+ D+ P+ V
Sbjct: 769 WAWGYNCSGQLGIGTHGSLADENTPQKV 796
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 29/291 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMR 188
++AG N S + G L++ GD GQLG G +S + +P KV + +IA G
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDAL--PPAAKIAAGDN 1043
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+L L D V+ +G GQLG+ S + + PQ + ++ I+ G S
Sbjct: 1044 HALALAPD---GSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV--AAIACGGSHS 1098
Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
A++ +G L++WG G PQ + + + + A G + L LT DG V
Sbjct: 1099 LAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEYYSLALTRDGSVW 1158
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L + P V E +SN V IAAG +HS +T + ++ +WG
Sbjct: 1159 SWGDNSDGQLGLGDNEDRNTPQKV--EVLSN-----VAAIAAGEDHSLALTRDGSVWSWG 1211
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
GQLGL + D+ P+ V + + G+ ++AIS L
Sbjct: 1212 RNSRGQLGLDDNDDRNTPQPVTTISNIK------AIAAGNSHSFAISEEGL 1256
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 157/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 21/247 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
+V++WG +DGQLG + +E N+ SLS + + +ACG H LAL+ S +
Sbjct: 104 QVYAWGLDSDGQLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----E 157
Query: 93 VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WG+ GQLG G + P+ + G + ++AG HS ++ SG +F G
Sbjct: 158 VFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGWG 215
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGYG 272
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------S 265
QLG + ++ +V + I SA + + G +Y++G G N S
Sbjct: 273 QLGHNSTS-HEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331
Query: 266 TSDVNCP 272
TS+ P
Sbjct: 332 TSNRKSP 338
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T + G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 161/357 (45%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E + P+ + +V + CG H + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G +F+ G G
Sbjct: 59 GCNDLGQLGHDKSRKK--PEQVGALDAQ--IIVAVSCGEAHTLALNDKGQVFSWGHAAHG 114
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
Q+G + P + S + + Q+ACG HSL L K+ + +Y +G + GQLG+
Sbjct: 115 QIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKE---SNIYSWGQNQYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
++ R S P+ L I I+A G S AL+ G ++ WGR G N +D
Sbjct: 172 GSEK-RKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P L S S G +H LT +G V G +G L P
Sbjct: 231 SDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H+ A V + I ++G G +GQLG+G+T ++ P +V
Sbjct: 286 RKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + + P+ FF + + G H+GFV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--NVRDVGCGNRHTGFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + + + ++CG H+L L QV+ +G
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDK---GQVFSWGHAAH 113
Query: 211 GQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQ+GVS +D IR +P+ L DI+IV ++ S ALS E ++Y+WG+ G
Sbjct: 114 GQIGVSIAEDYIR---VPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLG 170
Query: 263 FNSTS-DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
S + P+ + S + F+ A G H LT G + G + G L +
Sbjct: 171 LGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ P AL K +L K+I I G +H+A +T+ + T+G G +GQLG + +++P
Sbjct: 231 SDP---ALLK--SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G E +P+ ++ SLS + +A GG H ALT I G
Sbjct: 158 IYSWGQNQYGQLGLGSEKRKESAPR--HIKSLSGIPFAHIAAGGGHSFALT-----ISGA 210
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQK--IIYICCGEDHTAALTKEGGVFTFGA 268
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QIACG +H+L + ++Y FG G GQ
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 326
Query: 213 LGV 215
LG+
Sbjct: 327 LGI 329
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 26/271 (9%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P + F+NKNV + CG RH+ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R + P+ L IV +S + AL+ +G +++WG G
Sbjct: 62 DLGQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ D + P+++ S + Q A G +H L L+ + + G + +G L + S
Sbjct: 118 VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLG----LGS 173
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ A + +L G+ IAAG HS +T + AI WG + GQLGL + D+ P
Sbjct: 174 EKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDP 233
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
++ + + + CG T A+++
Sbjct: 234 ALL----KSLRSQKIIYICCGEDHTAALTKE 260
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V+SWG GQ+G D + P+ N+ SLS + + +ACG H LAL+ S+
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPR--NIKSLSDIQIVQVACGHHHSLALSKESN---- 157
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++SWG+ GQLG G E P+ + G + HI+AG HS ++ SG +F
Sbjct: 158 -IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPF--AHIAAGGGHSFALTISGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D S P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 178/391 (45%), Gaps = 80/391 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG G D P+ ++ +V ++ACG A+T + G ++
Sbjct: 291 EVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVT-----LSGDLY 345
Query: 95 SWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG + G LG G P+ ++ +G ++ +S G H+ V+ +G LFT G
Sbjct: 346 IWGGNAYNFGLLGCGSEATQWVPRKLSGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFG 403
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------QV 202
DGTFG LGHGD S S+P +V S ++ACG+ H+ +++ +G+ ++
Sbjct: 404 DGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKL 463
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G G +G+LG +GD+ A L
Sbjct: 464 FTWGDGDKGRLG----------------------------HGDKEARL------------ 483
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
P + + + SF Q A G + + LT G+V +G +G L +P+
Sbjct: 484 --------VPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQ-ADGK 534
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V + + N V ++A GA H AV+T + TWG G +G+LG G+T D+ P
Sbjct: 535 VPTRVEGKLMKNF----VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 590
Query: 381 VVNLGDEFQNRDTQLE-VFCGSGFTYAISRH 410
+V +D Q++ + CG+ FT AI H
Sbjct: 591 IVE-----ALKDKQVKGIICGTSFTAAICLH 616
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
S + P+++ S + Q A G+ H L L+ EV G + +G L E
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK 177
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T P + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-----QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 233 P---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 GV 215
G
Sbjct: 328 GT 329
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
+V++WG +DGQLG + +E N+ SLS + + +ACG H LAL+ S +
Sbjct: 104 QVYAWGLDSDGQLGL-QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS-----E 157
Query: 93 VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WG+ GQLG G E P+ + G + ++AG HS ++ SG +F G
Sbjct: 158 VFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPF--MQVAAGGAHSFVLTLSGAIFGWG 215
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FGQLG D P + S ++ + I CG H+ L K+ V+ FG+G G
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE---GGVFTFGAGGYG 272
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRGFN------ 264
QLG + P+ L + I+ ++A + G +Y++G G N
Sbjct: 273 QLG--HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 265 STSDVNCP 272
STS+ P
Sbjct: 331 STSNRKSP 338
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 10 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 67
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 68 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 122
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 123 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 179
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 180 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 238
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 239 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 293
Query: 379 PKVV 382
P+ V
Sbjct: 294 PRKV 297
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 67
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 68 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 123
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 124 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 180
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 181 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 239
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 240 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 294
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 295 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 351
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 14 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 70
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 71 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 126
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 127 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 186
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 187 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 239
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 240 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 269
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 166 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 218
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 219 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 276
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 277 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 334
Query: 212 QLG 214
QLG
Sbjct: 335 QLG 337
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 220 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 274
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 275 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 332
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 333 NGQLGTGSTSNRKSPFTVK 351
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 161/350 (46%), Gaps = 27/350 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA + GQLG G L+ ++ S+ V +A GG+H LA+ S + +++
Sbjct: 58 VWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHALAVLSDKT-----LWA 112
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR GQLG G + P V G + ++ +N + +SD G + T G +
Sbjct: 113 WGRNGDGQLGVGSTTSSFSPVKVPGRTGVE-VVAMAASTFNSAAVLSD-GKVLTWGYNAY 170
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G SSPV+VS+ ++ ++ G H L L G V+ +G GQLG+
Sbjct: 171 GQLGNGSTTDQSSPVEVSAL--SDIKGVSVGKYHMLALRS---GGTVWAWGFNGSGQLGL 225
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ PQ L + +SA S AL +G ++ WG+ G S +D
Sbjct: 226 GSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSFTDR 283
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P +P + A G H L L DG V G + G L D +S + P+ +
Sbjct: 284 PSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPV-----Q 338
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V L G V+ +AAG HS V + + TWG GQLG G+ HP
Sbjct: 339 VPGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHP 386
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 155/363 (42%), Gaps = 33/363 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+W+WG GQLG + L+P ++ +SL+ V +A GG H LAL S GK++
Sbjct: 480 KLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSD-----GKLW 534
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG S QLG D L + + ++AG HS V +G + G
Sbjct: 535 SWGSNSLSQLGVSR--DTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNG 592
Query: 155 FGQLGHG----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+GQ+G G SSP + ++ ++ +A G HSL L D V+ +G
Sbjct: 593 YGQIGDGCSPVPTFYCSSPTEPTNLF--SILGVAAGQNHSLALRSD---GTVWAWGRNNS 647
Query: 211 GQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG DR R V + ++ +V + A S AL ++G ++ WG G
Sbjct: 648 GQLGDGSLVDRTRPVQVARLN------RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLG 701
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ P +P A G H L L DG V G + +G + D S
Sbjct: 702 DGTYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIGDGSDASIIYR 761
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG-NTCDQIHPKV 381
S S+ D V+ +AAG HS V + TWG + GQLG N D+ P
Sbjct: 762 PSPVKVLFSSQD--VVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYATNNTDRSTPGE 819
Query: 382 VNL 384
V L
Sbjct: 820 VTL 822
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 162/417 (38%), Gaps = 92/417 (22%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G SP + + L+ V +A G H +A+ S G+V++
Sbjct: 314 VWAWGFNGSGQLGDGTTLSRSSP--VQVPGLTGVVSVAAGDGHSVAVLSD-----GRVYT 366
Query: 96 WGRGSSGQLGHGEMVDALYPKP----VTFFDG-HRYT----------------------- 127
WGR S+GQLG G +P P + F G HR
Sbjct: 367 WGRNSAGQLGDGSQDALPHPTPGQALLPFVCGNHRLEPEEQCDDGNSINGDGCSALCLAE 426
Query: 128 ---------ITHISAGWNHSGFVSDSGCLFTC------------------GDGTF----- 155
I + + V+ GC F C DG
Sbjct: 427 SGSSLCGDGIKAAAEACDDGNLVNGDGCSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGH 486
Query: 156 ---GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG + +PV VS+ +V +A G HSL L D +++ +GS Q
Sbjct: 487 NFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSD---GKLWSWGSNSLSQ 543
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSDVNC 271
LGVS+D + S + P + G+ + V S + + G + WG G+ D
Sbjct: 544 LGVSRDTLGSRASPALVSGVSGVVAVAAGET--HSLVVLSNGKVSAWGYNGYGQIGDGCS 601
Query: 272 P--------QSLPSSL-SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
P + P++L S A G NH L L DG V G ++ G L D V TRP
Sbjct: 602 PVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGTVWAWGRNNSGQLGDGSLVDRTRP 661
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ VA +V+ + AG HS + + + WG GQLG G Q+ P
Sbjct: 662 VQVARLN-------RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLP 711
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 127/299 (42%), Gaps = 28/299 (9%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++WG S GQLG G L PV F +G + ++AG +H+ V L+
Sbjct: 56 GSVWTWGANSGGQLGDGTTAYRLASAPVDFSNG--MVVKRVAAGGSHALAVLSDKTLWAW 113
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLG G S SPVKV V +A +S +L D +V +G
Sbjct: 114 GRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSAAVLSD---GKVLTWGYNAY 170
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
GQLG S P L DI+ G+S AL + G ++ W GFN
Sbjct: 171 GQLG--NGSTTDQSSPVEVSALSDIK--GVSVGKYHMLALRSGGTVWAW--GFNGSGQLG 224
Query: 265 ----STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
S + N PQ + + G +H L L DG V G ++ G L +
Sbjct: 225 LGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQGQLGIGSF--TD 282
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
RP V + +++ V+++AAG H+ + + + WG+ GQLG G T + P
Sbjct: 283 RPSPVQVPRLTG-----VVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSP 336
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 166/373 (44%), Gaps = 50/373 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV +WG GQLG G D+ SP + +S+LS + ++ G H+LAL S GG V+
Sbjct: 161 KVLTWGYNAYGQLGNGSTTDQSSP--VEVSALSDIKGVSVGKYHMLALRS-----GGTVW 213
Query: 95 SWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+WG SGQLG G + Y P+ G + +SAG +HS + G ++ G
Sbjct: 214 AWGFNGSGQLGLGSGSNTQYNTPQQAAVLKG----VASVSAGDSHSLALRWDGTVWAWGQ 269
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + SPV+V V ++A G H+L L D V+ +G GQ
Sbjct: 270 NNQGQLGIGSFTDRPSPVQVPRLT--GVVEVAAGQFHALALRLD---GTVWAWGFNGSGQ 324
Query: 213 L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
L G + R V +P +T +V ++A S A+ ++G +YTWGR
Sbjct: 325 LGDGTTLSRSSPVQVPGLT------GVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDG 378
Query: 271 CPQSLPSSLSFSQAALGW---NHVL----------VLTGDG-EVLMLGGSHHGMLSDPER 316
+LP + QA L + NH L + GDG L L S + D +
Sbjct: 379 SQDALPHP-TPGQALLPFVCGNHRLEPEEQCDDGNSINGDGCSALCLAESGSSLCGDGIK 437
Query: 317 VSSTRPLSVALEKVSNLDGVKVI------QIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
++ + + N DG + ++ AGA+ + + + WG GQLG
Sbjct: 438 AAAE---ACDDGNLVNGDGCSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGD 494
Query: 371 GNTCDQIHPKVVN 383
+T +++ P V+
Sbjct: 495 DSTVNRLTPVSVS 507
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 28/267 (10%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQ 182
R +AG ++ D G ++T G + GQLG G YR S+PV S+ V +
Sbjct: 36 RLETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSN--GMVVKR 93
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGI 240
+A G H+L +L D ++ +G GQLGV + V +P G +E+V +
Sbjct: 94 VAAGGSHALAVLSD---KTLWAWGRNGDGQLGVGSTTSSFSPVKVP----GRTGVEVVAM 146
Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+A+ SAA+ ++G + TWG G ST+D + P + + ++G H+L L
Sbjct: 147 AASTFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLAL 206
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSS--TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G V G + G L ++ P A+ K V ++AG HS +
Sbjct: 207 RSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLK-------GVASVSAGDSHSLALR 259
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + WG GQLG+G+ D+ P
Sbjct: 260 WDGTVWAWGQNNQGQLGIGSFTDRPSP 286
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 171/374 (45%), Gaps = 51/374 (13%)
Query: 54 DELSPQLLNLSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
D PQ ++ LS ++M+ G H LALT +V+SWG G G+LGHG+
Sbjct: 500 DTQCPQ--EMTGLSGINMIKIAAHPEGKHYLALTK-----DYEVYSWGNGDGGRLGHGDT 552
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
P + G I + G +S +S +G L+T G G +G+LGHG +P
Sbjct: 553 STKEEPTLIQALKGK--DIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTP 610
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQ 227
+S+ ++++ ++ACG ++ L C+ +Q VY +G G G+LG + LP+
Sbjct: 611 TMISALSDEHIIKVACGSFYAHTL---CITSQGKVYSWGDGDYGKLG--RGGSDGSKLPR 665
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSL 279
+ L +++IV + S ALS +GH+YTWG+G + +V P+ +
Sbjct: 666 LIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDR 725
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+LG +HVL LT GEV G + + + D + +P + L G KV+
Sbjct: 726 KVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQP-----RLIEALKGQKVV 780
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE-FQNRDTQLEVF 398
+ G S + W + + T P V++LG++ F+ + LEV
Sbjct: 781 GVCCGPAQS-----------FAWTDDNE----RTPKTAVPFVIDLGEQTFKLIENLLEVV 825
Query: 399 CGSGFTYAISRHCL 412
+ T A + C+
Sbjct: 826 LTN--TIAQDKECI 837
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 175/384 (45%), Gaps = 33/384 (8%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG QLG + +L Q LS L + + GG+ L + S GK+
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHI--AGGSKSLFIVSHE----GKL 2948
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G++G+LG G + YP+P+ F + + +G H+ ++ G +F+ G+G
Sbjct: 2949 YACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG 3008
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + P + + +K + IACG HS + ++Y +G G+ G+L
Sbjct: 3009 EDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3065
Query: 214 GVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG-FNS----- 265
G D I + P++ L H I V + ++ AL+ EG +++WG G F
Sbjct: 3066 G-HGDNITQLK-PKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG 3123
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N P ++ ++L Q G L LT GEV G + L +P
Sbjct: 3124 SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPT 3183
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +L KVI +A GA H VT+ + WG +HGQ G G T P +V+
Sbjct: 3184 V-----IESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVH 3238
Query: 384 -LGDEFQNRDTQLEVFCGSGFTYA 406
L D NR V CGS + A
Sbjct: 3239 GLEDVHINR-----VACGSSHSIA 3257
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL++ V+SWG G G+LGHG + PK + G Y I I+ G
Sbjct: 3965 GGKHCLALSA-----DNDVYSWGEGDDGKLGHGNRLACETPKLIEALQG--YEIIDIACG 4017
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L+T G G +G+LGHGD P + V V +ACG +L
Sbjct: 4018 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLC 4077
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P+ L + ++ + S AL+
Sbjct: 4078 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR 4132
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G + V P+ + + A G H + + +GEV G
Sbjct: 4133 SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 4192
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ G L D + RP VS L G K+ +A G+ H+ + N A
Sbjct: 4193 DNDEGQLGDDTTNAIQRP-----RLVSALQGKKITNVACGSAHTLAWSTNNA 4239
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 12/226 (5%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+SWG G DG+LG G RL E +P+L+ + +ACGGAH A+TS G+++
Sbjct: 3978 VYSWGEGDDGKLGHGNRLACE-TPKLIEALQGYEIIDIACGGAHSAAITS-----TGQLY 4031
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK + G++ +G + ++D +++ GDG
Sbjct: 4032 TWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 4091
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4148
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
V P+ L +I+ I+ A S EG ++TWG
Sbjct: 4149 HGTG--EHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 4192
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P L+ + + CGG + A+++ G ++
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA-----NGALY 589
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGRG+ G+LGHG D L P ++ + + H+ ++ G +++ GDG
Sbjct: 590 TWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGD 649
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P + N + Q+ CG + S+ L +D VY +G G+ +LG
Sbjct: 650 YGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED---GHVYTWGKGEGWKLG 706
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+ +V P++ L D ++VG+S AL+ +G +Y WG+ N
Sbjct: 707 HPTE--ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNEN 754
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 23/256 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G G+LG G D+L P+L+ V +ACG A L +T +
Sbjct: 4029 QLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN----- 4083
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG G PK + G + + G S ++ SG ++T G
Sbjct: 4084 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAG--LGVIKVECGSQFSVALTRSGSVYTWGK 4141
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G + +LGHG P KV++ K + IA G H + + +V+ +G GQ
Sbjct: 4142 GDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE---GEVFTWGDNDEGQ 4198
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG D ++ P++ L +I ++ H W S++ P
Sbjct: 4199 LG--DDTTNAIQRPRLVSALQGKKITNVAC---------GSAHTLAWSTNNASSACARLP 4247
Query: 273 QSLPSSLSFSQAALGW 288
P Q W
Sbjct: 4248 PVAPLEYDLLQDIPTW 4263
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G ++
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLR--PVQLVGGEQTLFAVTADGKVYAT 3927
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + + +IA G +H L L D N VY +G G
Sbjct: 3928 GYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD---NDVYSWGEG 3984
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
G+LG +R+ + P++ L EI+ I+ G SAA+++ G LYTWG+ G
Sbjct: 3985 DDGKLG-HGNRL-ACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLG 4042
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----SDP 314
+ D P+ + + + + G L +T D V G +G L SD
Sbjct: 4043 HGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4102
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+V +K+ +L G+ VI++ G++ S +T + ++ TWG G++ +LG G
Sbjct: 4103 CKVP---------KKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGE 4153
Query: 375 DQIHPKVV 382
PK V
Sbjct: 4154 HVRRPKKV 4161
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 39/388 (10%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ WG GQLG ++ LS+L V ++ G + A+T+ GKV+
Sbjct: 3872 IYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVG-GEQTLFAVTA-----DGKVY 3925
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G L P + +++G H +S +++ G+G
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ + +P + + + IACG HS + Q+Y +G G+ G+LG
Sbjct: 3986 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITS---TGQLYTWGKGRYGRLG 4042
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRG------FN 264
S+D+++ P++ L +++ ++ +GD ++ ++ + ++++WG G
Sbjct: 4043 HGDSEDQLK----PKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4098
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ P+ + S L + G + LT G V G + L RP
Sbjct: 4099 GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRP 4158
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+KV+ L G K+I IA G+ H ++ + TWG + GQLG T P++V
Sbjct: 4159 -----KKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLV 4213
Query: 383 NL--GDEFQNRDTQLEVFCGSGFTYAIS 408
+ G + N V CGS T A S
Sbjct: 4214 SALQGKKITN------VACGSAHTLAWS 4235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 69/270 (25%)
Query: 150 CGDGT---FGQLGHGDYRSHSS----PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGN 200
C D T Q G + +SS P +++ N+ +IA +H L L KD
Sbjct: 478 CSDRTILILTQTGKVFFMYYSSDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKD---Y 534
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+VY +G+G G+LG + P + L +I+ + G SAA+SA G LYTWG
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEE--PTLIQALKGKDIIDVECGGTYSAAISANGALYTWG 592
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
RG + LG HG D
Sbjct: 593 RG-------------------NYGRLG--------------------HGTAED------- 606
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ +S L +I++A G+ H+ +T + +WG G++G+LG G +
Sbjct: 607 ---CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKL 663
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P+++ ++ QN ++V+CG+ F+ A+S
Sbjct: 664 PRLI---EKLQNVKI-VQVYCGAQFSVALS 689
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 22/195 (11%)
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
PQ L ++ I I + L+ G ++ +SD CPQ + +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----MYYSSDTQCPQEMTGLSGINMIK 517
Query: 286 LGW----NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
+ H L LT D EV G G L + + P + L G +I +
Sbjct: 518 IAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEP-----TLIQALKGKDIIDV 572
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCG 400
G +SA ++ N A+ TWG G +G+LG G D + P +++ L DE ++V CG
Sbjct: 573 ECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEH-----IIKVACG 627
Query: 401 SGFTYAISRHCLPSQ 415
S + + + C+ SQ
Sbjct: 628 SFYAHTL---CITSQ 639
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 169/378 (44%), Gaps = 42/378 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L+ + ++ACG H + +T G++FSWG S G+LGHG D
Sbjct: 285 DALLPKALDRIAALDAQIIACGSKHAVIVTK-----QGQIFSWGESSGGKLGHGADADVS 339
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVK 171
PK + + ++ G H+ V+ SG L+T GD T G LGHG SH P +
Sbjct: 340 QPKVIDALS--ESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPRE 397
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG------VSKDR----I 220
V + + ++CG H+ + +++ FG G G LG SK R +
Sbjct: 398 VIGQIESVRISFVSCGPWHTAAVSSQ---GKLFTFGDGTFGALGHGDRSSTSKPREVESL 454
Query: 221 RSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSDVNCPQSLP 276
+ + +V+ G+ H ++ DR S G L+TWG RG D P+ +P
Sbjct: 455 KGLRTLKVSCGIWHTAAVIDFINESDR-LDTSLSGKLFTWGAGERGQLGHGDEE-PRLVP 512
Query: 277 SSLSFS----QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
S +S Q A + + LT G+V +G + +G L P V + + +
Sbjct: 513 SCVSMPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGK-----LPIHTDGD 567
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
+ + QIA G+ H ++ N + TWG G +GQLG G+ D+ P +V Q +
Sbjct: 568 IRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVK- 626
Query: 393 TQLEVFCGSGFTYAISRH 410
V CGS FT I H
Sbjct: 627 ---SVVCGSNFTAVICPH 641
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 158/346 (45%), Gaps = 42/346 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G D P++++ S S+V ++ACG H A+T + G ++
Sbjct: 318 QIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVT-----VSGNLY 372
Query: 95 SWGRGS--SGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+WG + +G LGHG V P+ V I+ +S G H+ VS G LFT GD
Sbjct: 373 TWGDDTHNTGYLGHGSAVSHWIPREV-IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGD 431
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL---------LKDCLGNQVY 203
GTFG LGHGD S S P +V S +++CG+ H+ + L L +++
Sbjct: 432 GTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLF 491
Query: 204 GFGSGKRGQLGVSKDRIR----SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+G+G+RGQLG + R VS+P + ++ + AL+ G +YT
Sbjct: 492 TWGAGERGQLGHGDEEPRLVPSCVSMPA--------GVCQVACAHSMTIALTVLGQVYTM 543
Query: 260 GRGFNSTSDVNCPQ-SLP-------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G C LP + Q A G +HV+ L+ +G+V G +G L
Sbjct: 544 GAADYGQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQL 603
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
+ P V L +V + G+ +AV+ ++ +
Sbjct: 604 GHGDIKDRHTP-----TLVKALKHKQVKSVVCGSNFTAVICPHKCV 644
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADR-SVKEVACGGNHSVFLLEDGEVYTCG 513
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 514 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 568
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 569 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 625
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 626 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 685
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 686 SPCHVKL-----LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 740
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 741 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 773
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 159/358 (44%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG-TGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G + L ++ PQ+ + SV +ACGG H + L G+V++
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLE-----DGEVYTC 512
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 513 GLNTKGQLGHER--EGNKPEQIGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSD 567
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 568 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 624
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 625 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 683
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 684 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 739
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 740 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 796
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 611 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 665
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 666 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 723
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 724 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 781
Query: 214 G 214
G
Sbjct: 782 G 782
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 665 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 719
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 720 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 777
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 778 RGQLGTG----HTCNVKCPSPVK 796
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 169/379 (44%), Gaps = 60/379 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 2637 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 2691
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 2692 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 2743
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 2744 SDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2801
Query: 169 PVKVSSFVNKNVHQ-------IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
P +V++ + Q +ACG+ H+L + D G+ V+ FG G G+LG+ +
Sbjct: 2802 PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTD--GSMVWAFGDGDYGKLGLGNSTAK 2859
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSL 275
S PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +
Sbjct: 2860 SS--PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 2917
Query: 276 P--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
P + + A+G H L L G+V G + G L P V + L
Sbjct: 2918 PVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV-----L 2972
Query: 334 DGVKVIQIAAGAEHSAVVT 352
G + QI+AG HSA T
Sbjct: 2973 QGKNIRQISAGRCHSAAWT 2991
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 37/367 (10%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 2624 VFLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 2674
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 2675 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2734
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 2735 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 2791
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEI-------VGISANGDRSAALSAEGHLY------TWG 260
G+ + LP+ L +I ++ + + A+S +G + +G
Sbjct: 2792 GLGNTSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849
Query: 261 R-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+ G +++ + PQ + + + A G + LT DG V G L +
Sbjct: 2850 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 2909
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ RP ++V L GV + +A GAEH+ + + WG GQLGLG+T
Sbjct: 2910 NHNRP-----QQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVR 2964
Query: 378 HPKVVNL 384
P +V +
Sbjct: 2965 EPTLVTV 2971
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H + LT GEV G +G L RP ++ L G +V+Q++ G +HSA
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQMSCGFKHSA 2772
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF---QNRDTQLEVFCGSGFTYA 406
VVT + + T+G G++G+LGLGNT ++ P+ V + + Q + V CG T A
Sbjct: 2773 VVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLA 2832
Query: 407 IS 408
+S
Sbjct: 2833 VS 2834
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
S + P+++ S + Q A G+ H L L+ EV G + +G L E
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK 177
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T P + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-----QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 233 P---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + GQL
Sbjct: 324 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 353
Query: 215 VSKDRIRSVSLPQVTIG 231
DR + + Q+ G
Sbjct: 354 ARADRFKYHIVKQIFSG 370
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 5 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 63
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 64 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 118
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 119 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 175
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 176 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 235
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 236 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 290
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 291 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 323
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 159/365 (43%), Gaps = 32/365 (8%)
Query: 32 QVVKVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
++ + WG + GQ G T PQ+ S SV +ACGG H + L
Sbjct: 1 KIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE----- 55
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G+V++ G + GQLGH + P+ + D H I H++ G +HS +SD G LF
Sbjct: 56 DGEVYTCGLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLF 110
Query: 149 TCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G G+ GQLG S + P + + + Q++CG H L L D Q + +G
Sbjct: 111 SWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGK 167
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
GQLG+ K+ S + PQ L I + ++A G S ALS G ++ WG
Sbjct: 168 NSHGQLGLGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQL 226
Query: 262 GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G + D P L + + G H VLT G V G G L
Sbjct: 227 GLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 286
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P +V L G +V QIA G +H+ A V + I +G G GQLG G+TC+
Sbjct: 287 VNP-----RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKC 341
Query: 379 PKVVN 383
P V
Sbjct: 342 PSPVK 346
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + A G H + T DGEV G
Sbjct: 4217 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VA L G KV ++A G+ H+
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 4315
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG+ + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGLGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 134/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
S P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 SKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 379 PKVVN 383
P+ V
Sbjct: 4242 PRQVQ 4246
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4011
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4072 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4127 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4155
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVNL 384
+LG G+ Q+ PK+V +
Sbjct: 3131 RLGHGDNTTQLKPKMVKV 3148
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LGLG +PK++
Sbjct: 657 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 483
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 484 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 156/324 (48%), Gaps = 29/324 (8%)
Query: 40 GAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
G G+ G+LG G ++ P+ L + + +S H LALT+ G+V+SWG
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTT-----GEVYSWG 507
Query: 98 RGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G G+LGHG PK V G + +SAG+ HS V++ G L+T GDG FG
Sbjct: 508 DGDYGKLGHGTHSTQKIPKLVKGPLVGK--VVKCVSAGYRHSAAVTEDGELYTWGDGEFG 565
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LGH S + P KV S ++V +ACG H+L + +D G ++ FG G+ G+LG
Sbjct: 566 RLGHDYTSSKNFPTKVQSI--ESVGLVACGGSHTLAVSQD--GKTIWSFGGGENGKLG-H 620
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSDVNCP 272
D R + P+V L+ + I ++ S A+++ G LY WG G S
Sbjct: 621 GDTNRQLK-PKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYTALR 679
Query: 273 QSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALE 328
L L + A G +HV+ LT + EV G + G S TRP +
Sbjct: 680 PRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRP-----K 734
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVT 352
+V LDGV V Q++AG HS T
Sbjct: 735 RVIGLDGVSVHQVSAGTSHSVAWT 758
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 33/330 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V+ WG + QL G PK F + + AG + + G + C
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQ----QVEAGQFCTFLIYSDGTVGAC 452
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGS 207
G G++G+LG GD + S P K F K V +I+ HSL L +VY +G
Sbjct: 453 GKGSYGRLGLGDSNNCSVP-KKPLFDKKYVKKISSSKGSDGHSLALTTT---GEVYSWGD 508
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR----- 261
G G+LG + + P++ G ++V + G R SAA++ +G LYTWG
Sbjct: 509 GDYGKLGHGTHSTQKI--PKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGR 566
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM-LGGSHHGMLSDPERVSS 319
G + TS N P + S S A G +H L ++ DG+ + GG +G L +
Sbjct: 567 LGHDYTSSKNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQ 626
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIH 378
+P + + L+G+ + ++A G++ S VT + + WG G LG G+ +
Sbjct: 627 LKP-----KVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG--AILGCGSAEYTALR 679
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P++V ++ Q++ +++ CG A++
Sbjct: 680 PRLV---EDLQSK-RMVDIACGDSHVIALT 705
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 155/361 (42%), Gaps = 35/361 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG+ QL G +P+ S C + G V
Sbjct: 398 EVYVWGSNCTHQLAEGGQEKITTPKY-------SAVFTDCQQVEAGQFCTFLIYSDGTVG 450
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G+GS G+LG G+ + PK F + I+ HS ++ +G +++ GDG
Sbjct: 451 ACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGD 510
Query: 155 FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG + + P V V K V ++ G RHS + +D ++Y +G G+ G+L
Sbjct: 511 YGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTED---GELYTWGDGEFGRL 567
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGDRSAALSAEGH-LYTWGRGFNST---SD 268
G D S + P + IE VG+ A G + A+S +G ++++G G N D
Sbjct: 568 G--HDYTSSKNFP---TKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD 622
Query: 269 VN---CPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSSTRP 322
N P+ + + L + A G L +T G++ G G+ G S ++ RP
Sbjct: 623 TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGS--AEYTALRP 680
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI-HPKV 381
V +L +++ IA G H +T + WG GQ G G+ I PK
Sbjct: 681 -----RLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKR 735
Query: 382 V 382
V
Sbjct: 736 V 736
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +QIAAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +QIAAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCNKQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS +++WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S + F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCNKQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D +
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+SWG GQLG G + + SPQL+ SL+ + + A GGAH LT + G
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQASPQLI--KSLTGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V++WG +DGQLG G P+ N+ SLS + + +ACG H LAL+ S
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPR--NIKSLSDIQIVQVACGYYHSLALSKAS----- 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G + P+ + G + ++AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPF--MQVAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S + + I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
Length = 1271
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 179/408 (43%), Gaps = 76/408 (18%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
+ + + E+ +W WG + GT + L P+ ++L + + +ACGG H+L LT
Sbjct: 457 LNDHQSEEPSSHMWVWGRPPSLEGGTPLV---LRPKQVSLLNGQPIVQVACGGEHLLYLT 513
Query: 84 SPSSVIGGKVFSWGRGSSGQLG------HGEMVDALYPKPVTFFDG-----HRYTITHIS 132
S G V+S+G + + D Y + ++ HR TI IS
Sbjct: 514 S-----TGDVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMIS 568
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
G HS ++D+G L+T G G G+LGHGD R + P KV S + ++V +CG+ +
Sbjct: 569 CGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCGLGDN-- 626
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+D +Q+ GF G R I + + +AAL
Sbjct: 627 KWRDT-PHQIVGFPQGTR--------------------------ISNVVCGWNFTAALDR 659
Query: 253 EGHLYTWGR--------GFNSTSDV--NCPQSLPSSLSFSQA---ALGWNHVLVLTGDGE 299
+G+++TWG+ G+ V C + L + S A A G+ H +VLT GE
Sbjct: 660 QGNIFTWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGE 719
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G +G L+ V L + ++ ++ GA HS TE R +
Sbjct: 720 LYSWGLGEYGQLA-----------RVQLPSDALCAPDQLTRVYCGAFHSIATTEKRVMFA 768
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
WG +G GLG+T ++ P+ + D F ++ T+L V CG +T A+
Sbjct: 769 WGLNSYGACGLGHTANKDKPERI---DCFSSQ-TELVVACGHKYTIAL 812
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEED 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GLDCKKQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S + F Q A G H VLT G + G + G L +
Sbjct: 171 LGLDCKKQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQTSPQLI--KSLVGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 80 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 138
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 139 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 193
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 194 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 250
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 251 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 310
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 311 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 365
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 366 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 398
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 149/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 104 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 156
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 157 IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 213
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 214 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 269
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 270 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 329
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 330 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 384
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 385 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 421
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 236 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 290
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 291 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 348
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 349 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 406
Query: 214 G 214
G
Sbjct: 407 G 407
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 344
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 345 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 402
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 403 RGQLGTG----HTCNVKCPSPVK 421
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +QIAAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +QIAAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
S + P+++ S + Q A G+ H L L+ EV G + +G L E
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK 177
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T P + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-----QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 233 P---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIK--SLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
S + P+++ S + Q A G+ H L L+ EV G + +G L E
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK 177
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T P + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-----QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 233 P---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 149/337 (44%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +QIAAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 157/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 VNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDQ---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWGR NS +
Sbjct: 115 QLGLMTIE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGR--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 148/337 (43%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGVNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGRNSHGQLGLGKE-FPSQASPQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ + A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 21/247 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWGAG+DGQLG + D ++ P+L+ + ++ ++CG H LAL + G+
Sbjct: 104 QLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQF 158
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WGR S GQLG G E P+ V +G + + AG HS +S SG +F G
Sbjct: 159 FTWGRNSHGQLGLGKEFPSQASPQRVRSLEG--IPLAQVVAGGAHSFALSLSGAVFGWGM 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG D + SP V + V I+CG H+ VL K V+ FG+G GQ
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG------RGFNS 265
LG D + P+ + L E+ I+ + A + G +Y +G G
Sbjct: 274 LG--HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGH 331
Query: 266 TSDVNCP 272
T +V CP
Sbjct: 332 TCNVKCP 338
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 32/305 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH ++ P V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ V +P+ L +I+IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-ECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
+ + PQ + S L F+Q A G H VLT G + G + G L D +R
Sbjct: 173 YEYKKQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T + +L KV+ I G +H+A +T+ + T+G G +GQLG +T +I
Sbjct: 232 VPTL--------LKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 378 HPKVV 382
+P+ V
Sbjct: 284 NPRKV 288
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 155/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GYEYKKQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QI G +H+ A V + I ++G G +GQLG G T ++ P V
Sbjct: 286 RKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G + SPQ++ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + + HI G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQK--VVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QI CG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SLS + ++ ACG H LAL+ G
Sbjct: 104 QVYAWGLATDGQLGLPGTEECVRVPR--NIRSLSEIQIVQVACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E P+ + G + I+AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S ++ V I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL V + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H+ FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGTTSNRKSPFTVK 342
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3079 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3132
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3133 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3190
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3191 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3247
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3248 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3305
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3306 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3365
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3366 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3392
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 549 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 603
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 604 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 663
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 720
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 721 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 780
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 781 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 835
Query: 342 AAGAEHS 348
A G S
Sbjct: 836 ACGPAQS 842
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4115 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4167
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4227
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4228 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4282
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4283 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4304
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4305 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4353
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4354 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4385
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4181
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4182 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4241
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4298
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4299 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4342
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 584 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 638
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 639 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 698
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 699 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 755
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 756 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4077
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4078 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4134
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4135 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4192
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4193 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4252
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4253 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4307
Query: 379 PKVVN 383
P+ V
Sbjct: 4308 PRQVQ 4312
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 4022 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4077
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4078 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4137
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4138 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4192
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4193 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4221
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 497 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 545
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 546 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 601
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 602 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 660
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 661 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 715
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 716 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 743
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 3024 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3081
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3082 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3141
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3142 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3196
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3197 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3227
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 552 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 606
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 607 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 666
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 667 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 724
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 725 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 773
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4337 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4395
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 434 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 492
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 493 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 551
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 552 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 597
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 598 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 636
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 171/393 (43%), Gaps = 32/393 (8%)
Query: 2 VAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDE--LSPQ 59
+ P+ K L +P I E ++ WG+ G+LG G + DE L P+
Sbjct: 46 IIPIKNANRNKKRRLA--CEPIIAVEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPR 103
Query: 60 LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
L+ + + +ACG + + +T G+V+S G GQLGH + L P
Sbjct: 104 ELDFQKATEIEQIACGENYTVLITR-----DGQVYSCGNNDYGQLGHEKGRKRLQLIP-- 156
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNK 178
+ ++ G +H+ V++ G LF+ G GQLG + P V +
Sbjct: 157 --GLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTS 214
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
V Q+ACG+ H L L + ++Y +GS GQLG+ D +++ P++ L + I
Sbjct: 215 VVVQVACGINHVLALTNN---GKLYSWGSNSDGQLGLGTD-VKNEIKPKLISSLAGVPIA 270
Query: 239 GISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNH 290
I+ G S A+S G ++ WG+ G N T + N P+ L + + AA G
Sbjct: 271 FITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEF 330
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT DG V G +G L + P +V L G V QI+ G H+
Sbjct: 331 SVFLTVDGGVFTCGAGMYGQLGHGNTSNEILP-----RQVMELMGSTVTQISCGKRHTLG 385
Query: 351 VTENRA-IMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +R + WG G GQLG T P+VV
Sbjct: 386 LVPSRGRVYAWGLGGAGQLGNNITRSVATPQVV 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K++SWG+ +DGQLG G + +E+ P+L++ + ++ + CGG H +A++ G V
Sbjct: 234 KLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISK-----SGAV 288
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ + GQLG + + P+ + + + + + G S F++ G +FTCG G
Sbjct: 289 FGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAK--VCYAACGEEFSVFLTVDGGVFTCGAG 346
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG+ + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 347 MYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPS--RGRVYAWGLGGAGQL 404
Query: 214 GVSKDRIRSVSLPQVTIG 231
G + RSV+ PQV G
Sbjct: 405 G--NNITRSVATPQVVHG 420
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 3015 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3068
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3069 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKR--IRDIACGSSHSAALTSSGELYTW 3126
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3127 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3183
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3184 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3241
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3242 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3301
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3302 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3328
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+VFSWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSF 281
L D+E+V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 136/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ V G + ++AG
Sbjct: 4051 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRG--IEVVDVAAG 4103
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V V +ACG +L
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLC 4163
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4164 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTK 4218
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4219 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4240
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4241 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4289
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4290 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4321
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4117
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4234
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4235 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GLH +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3958 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4013
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4014 GYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4073
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP V +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4074 KLGHGSRSPCDRP-----RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4128
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4129 HSDSEDQLKPKLV----EVLQGHRVVDVACGSG 4157
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4013
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4014 GYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 4070
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4071 EDGKLGHGSR--SPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4128
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L L + G L LT D V G +G L
Sbjct: 4129 HSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4189 CKVPM-----KIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4243
Query: 379 PKVVN 383
P+ V
Sbjct: 4244 PRQVQ 4248
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +++WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S Q A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ + ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLEV-VKVRCGSQFSVALTK 675
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2962 TKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 3019
Query: 260 GRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHH 308
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3020 GEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3079
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G+L
Sbjct: 3080 GKLGHFSRMNCDKP-----RLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 3134
Query: 369 GLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
G G+ Q+ PK+V LG ++V CGS
Sbjct: 3135 GHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3163
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 124/327 (37%), Gaps = 87/327 (26%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V+ +AC L L+ G+V++ S D L P+ V
Sbjct: 454 VTQIACAEKRFLILSR-----NGRVYTQAYNS----------DTLAPQLVQGLASRNIVK 498
Query: 129 THISAGWNHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ +H ++ +G +F+ CGDG G+LGHGD P +S+F
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCGDG--GRLGHGDTVPLEEPKVISAF----------- 545
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
SGK+G G H +V I+
Sbjct: 546 --------------------SGKQG-------------------GKH---VVHIACGSTY 563
Query: 247 SAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTG 296
SAA++AEG LYTWGRG S+ D P + L A G L +T
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+G+V G +G L P + + L ++V+++ G++ S +T++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTP-----KLIEKLQDLEVVKVRCGSQFSVALTKDGQ 678
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +WG G++ +LG G +P+++
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPRLLE 705
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPSSAGKL 4331
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 137/288 (47%), Gaps = 40/288 (13%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
+SD+G +F C D H + +P + + V Q+ACG +H++VL KD
Sbjct: 94 LLSDTGVVF-CVDSP-----HPPF----TPRSLEALSGITVTQVACGSQHTVVLSKD--- 140
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
QVY +G RGQLG+ K+ S+S PQ L + +V +SA GD S ALS G ++ W
Sbjct: 141 GQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGW 200
Query: 260 GR------GFNSTSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGM 310
GR G T+D P +L L+ + AA G +H VLT DG V G H+G
Sbjct: 201 GRNDCGQLGLGDTTDRETP-TLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQ 259
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L ++ P VA L G KV +IA G H+ V+T++ + ++G EHGQLG
Sbjct: 260 LGHNSFRNALCPRLVA-----ELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGP 314
Query: 371 GNTCDQIHPKVVNLGDE---FQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
P V L E QN +F G ++A C P Q
Sbjct: 315 REETHPCVPLPVQLPREGPIIQN------IFAGGDSSFAT---CRPEQ 353
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 13/217 (5%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG + GQLG G+ SPQ + S V ++ GG H AL+ + G
Sbjct: 142 QVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALS-----VSGS 196
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF WGR GQLG G+ D P V + + + + G +H+ ++ G +FT G
Sbjct: 197 VFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFA--ACGKDHTAVLTMDGTVFTFGS 254
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +R+ P V+ V +IACG H+LVL +VY FG + GQ
Sbjct: 255 GHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHM---KVYSFGCNEHGQ 311
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
LG ++ V LP V + I I A GD S A
Sbjct: 312 LGPREETHPCVPLP-VQLPREGPIIQNIFAGGDSSFA 347
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 116/296 (39%), Gaps = 58/296 (19%)
Query: 53 HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
H +P+ L S +V+ +ACG H + L+ G+V++WG+ S GQLG G+ +
Sbjct: 108 HPPFTPRSLEALSGITVTQVACGSQHTVVLSK-----DGQVYTWGQNSRGQLGLGKEGCS 162
Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
P + +SAG +HS +S SG +F G GQLG GD +P V
Sbjct: 163 SISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLV 222
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
K ACG H+ VL D V+ FGSG GQLG + R+ P++ L
Sbjct: 223 HYLNMKKTVFAACGKDHTAVLTMD---GTVFTFGSGHYGQLG--HNSFRNALCPRLVAEL 277
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVL 292
WG + + C G H L
Sbjct: 278 --------------------------WG---AKVTKIAC---------------GRYHTL 293
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
VLT +V G + HG L E PL V L + +G + I AG + S
Sbjct: 294 VLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQLPR----EGPIIQNIFAGGDSS 345
>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
Length = 596
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 178/399 (44%), Gaps = 54/399 (13%)
Query: 26 EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG------AHV 79
+ E+ +++ G G GQLG + ++ PQ + L G A V
Sbjct: 167 QPEQAAPEYAMYAMGRGFHGQLGLEQFDNQEQPQRVGAVERDVKVPLYQGAPDDIHLAVV 226
Query: 80 LALTSPSSVIG--GKVFSWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGW 135
A +S S+ I G++++WG SSG+LGHG ++ P+ +T R I +S G
Sbjct: 227 SAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEVSCPRMITSL--QRTRIVSVSCGA 284
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
NH+ +S++G L++CG G GQLGHG + + V + ++ V +A G HS+ L
Sbjct: 285 NHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAHSVALAA 344
Query: 196 DCLGNQVYGFGSGKRGQLGVSK---------DRIRSVSLPQVTIGLH------DIEIVGI 240
D +++ +G +GQLG ++ + S+ PQ L + I
Sbjct: 345 D---GKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAI 401
Query: 241 SANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQSLPSSLSFS--------QA 284
+A GD S A++ G L +G G T D P +P +L Q
Sbjct: 402 AAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQV 461
Query: 285 ALGWNHVLVLT---GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
G H L L G +V +GG+ +G L +R+ R + L G ++ +
Sbjct: 462 HCGAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHR-----FHPIPALKGKSIVCV 516
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
+ G H+A + ++ + WG G+ GQLGLG+ ++ PK
Sbjct: 517 SVGDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPK 555
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4217 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4238
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4239 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4288 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4319
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 379 PKVVN 383
P+ V
Sbjct: 4242 PRQVQ 4246
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4011
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4072 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4127 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4155
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 483
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 484 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 28/334 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG+ G+LG G + +E ++P+ ++ S ++V ACGG+H L LT G
Sbjct: 1 MALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTK-----DG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVSDSGCLFTC 150
K+++ G GQLGH + L K F Y +T +S G +HS +++ G LF+
Sbjct: 56 KLYTCGNNDHGQLGHD--TNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSW 113
Query: 151 GDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G GQLGH D S+ +P + S K V QI+CG H L L +++ +G+ +
Sbjct: 114 GSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN---SGELFAWGANE 170
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLG+ + V + L I I I+ G+ S A+S G ++ WG+ G
Sbjct: 171 YGQLGLGTTG-KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N P L + SL + G + + LT +G V G G L +
Sbjct: 230 NDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEIL 289
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P V L G K+ QIA G +H+ +R
Sbjct: 290 P-----RMVFELMGSKITQIACGRKHTLAFVPSR 318
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++ WG G+LG G + + P + + G +H+ ++ G L+TCG+
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGH + + P +S+ N V Q++CG+ HSL L Q++ +GS G
Sbjct: 63 NDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTN---WGQLFSWGSNATG 119
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG D + S P++ + +V IS AL+ G L+ WG G +
Sbjct: 120 QLGHDLDMV-SYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178
Query: 266 TSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
T +L SL+ + A G NH ++ G + G + G L + S P
Sbjct: 179 TGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYP 238
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ L + V I+ G + S +T+ + T G G GQLG G ++I P++V
Sbjct: 239 -----TQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV 293
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L+ G G+LG G +P ++ NV Q ACG H+L+L KD ++Y
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKD---GKLYT 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G+ GQLG + + + PQ L + + +S S AL+ G L++WG N
Sbjct: 60 CGNNDHGQLGHDTNNLPN-KRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGS--N 116
Query: 265 STSDVN---------CPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
+T + P+ + S + + Q + G +H L LT GE+ G + +G L
Sbjct: 117 ATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLG- 175
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ +T V +L G+ + IA G HS V+++ AI WG GQLGL +
Sbjct: 176 ---LGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232
Query: 374 CDQIHP-----------KVVNLGDEFQNRDTQ 394
+ +P + ++ GD+F TQ
Sbjct: 233 DSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 48 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 101
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 102 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 159
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 160 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 216
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 217 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 274
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 275 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 334
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 335 KP-----TLVQGLEGQKITRVACGSSHSVAWT 361
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 1084 GGKHCLALSSE-----GEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 1136
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 1137 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 1196
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 1197 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 1251
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 1252 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 1273
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 1274 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 1322
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 1323 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 1354
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 1150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 1151 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 1210
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 1211 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 1267
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 1268 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1311
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 989 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 1046
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 1047 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 1103
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
K G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 1104 KDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 1161
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 1162 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1221
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 1222 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 1276
Query: 379 PKVVN 383
P+ V
Sbjct: 1277 PRQVQ 1281
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 991 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 1046
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 1047 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDG 1106
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 1107 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 1161
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 1162 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 1190
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSL 275
+ +P + L + +V ++ A++ EG +Y+ G N S+ V P+ +
Sbjct: 16 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 75
Query: 276 P--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
SS + A+ G H LT DG+V G G L R++ +P +
Sbjct: 76 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIE 130
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQ 389
L ++ IA G+ HSA +T + + TWG GE+G+LG G+ Q+ PK+V LG
Sbjct: 131 ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV- 189
Query: 390 NRDTQLEVFCGS 401
++V CGS
Sbjct: 190 -----IQVACGS 196
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 1306 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 1364
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 177/402 (44%), Gaps = 56/402 (13%)
Query: 38 SWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
++G G G+LG + E P+++ + +ACGGAH A+ G V++W
Sbjct: 7 TFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDS-----GTVYTW 61
Query: 97 GRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GQLGH E + P V + + +SAG+ H+ V +SG +++ G
Sbjct: 62 GLNDKGQLGHDSEDSEVGLPGEVAMPE----RVVALSAGYYHTLCVGESGSVWSFGCNGK 117
Query: 156 GQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G D P V S + V +A GM HSL L G +VY +G+ G+LG
Sbjct: 118 GQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTA---GGEVYSWGNAANGRLG 174
Query: 215 ---VSKDRIRSVS---LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
+ R+ S LP++ + + +SA SAA+S G + WG G
Sbjct: 175 HGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLG 234
Query: 263 FNSTSDVNCPQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--PERVSS 319
F S D+ P LP S + A G H L L G VL G + +G+L ++
Sbjct: 235 FGSDEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQP 294
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW--------------GEH 365
RP S + GV QIAAG +HSA VT + + TWGW G
Sbjct: 295 KRP--------SKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTG 346
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLG GN D P V D +T L V CG T AI
Sbjct: 347 GQLGHGNDFDYWSPHHV---DWLSLTETDL-VACGMNHTAAI 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 113/238 (47%), Gaps = 27/238 (11%)
Query: 36 VWSWGAGTDGQLGTGR---LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
VWS+G GQLG G+ L E P+L+ + V +A G H LALT+ GG+
Sbjct: 109 VWSFGCNGKGQLGLGKDVVLVRE--PRLVKSLQDNKVVAVAAGMEHSLALTA-----GGE 161
Query: 93 VFSWGRGSSGQLGHGEMVD--------ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
V+SWG ++G+LGHG P+ V F+ R + +SAG HS VS +
Sbjct: 162 VYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALR--VEQVSAGQMHSAAVSTA 219
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G F G G F QLG G + P V + + +ACG HSL L G V
Sbjct: 220 GDAFLWGYGKFHQLGFGSDEDLAGPT-VLPPLKGSTAAVACGSLHSLALQ---YGGHVLA 275
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+G+ + G LG ++ + P G+ + I+A SAA++ G LYTWG G
Sbjct: 276 WGTNQNGVLGQGHEKQQQPKRPSKVPGVSAEQ---IAAGWKHSAAVTGSGKLYTWGWG 330
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G QLG G D P +L S + +ACG H LAL GG V +WG
Sbjct: 225 WGYGKFHQLGFGSDEDLAGPTVLPPLK-GSTAAVACGSLHSLALQ-----YGGHVLAWGT 278
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG------- 151
+G LG G PK + G + I+AGW HS V+ SG L+T G
Sbjct: 279 NQNGVLGQGHEKQQ-QPKRPSKVPG--VSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGT 335
Query: 152 -------DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
GT GQLGHG+ + SP V +ACGM H+ +++
Sbjct: 336 ALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG GQLG G + SPQL+ +A GGAH LT + G +
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + I +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKV 172
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTV 341
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4217 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4238
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4239 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4288 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4319
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 379 PKVVN 383
P+ V
Sbjct: 4242 PRQVQ 4246
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4011
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4072 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4127 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4155
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 483
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 484 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLH-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDYKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLHDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDYKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYFP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YFPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D +P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 3014 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3067
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3068 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3125
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3126 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3182
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3183 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3240
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3241 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3300
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3301 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3327
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + + + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DALAPQLVQGLASRNIIKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P + LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ V G + ++AG
Sbjct: 4051 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRG--IEVVDVAAG 4103
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4163
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4164 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4218
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4219 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4240
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4241 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4289
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4290 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4321
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4117
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4178 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4234
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4235 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D + P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRP--VQLIGGEQTLFAVTADGKLYAT 4013
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4014 GYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4070
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4071 EDGKLGHGNR--SPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4128
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4129 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4189 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4243
Query: 379 PKVVN 383
P+ V
Sbjct: 4244 PRQVQ 4248
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3958 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG----GEQTLFAVTADGKLYAT 4013
Query: 260 G------RGFNSTSDVNCPQSLPSS--LSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4014 GYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4073
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP V +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4074 KLGHGNRSPCDRP-----RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4128
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4129 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4157
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V QIAC + L+L + SG+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSR-----------SGRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL I+ I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDAL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 VIPVLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2959 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3016
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3017 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3076
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3077 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3131
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3132 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3162
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACG 186
+T I+ +S SG ++T Y S + +P V ++N+ +IA
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQA-----------YNSDALAPQLVQGLASRNIIKIAAH 502
Query: 187 M--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE----IVGI 240
H L L +VY +G G G+LG D + + P+V + +V I
Sbjct: 503 SDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEEPKVISAFSGKQAGKHVVHI 557
Query: 241 SANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--H 290
+ SAA++AEG LYTWGRG S+ D P + L A G
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQ 617
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L +T +G+V G +G L P +EK+ +LD V+++ G++ S
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIA 672
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+T++ + +WG G++ +LG G +PK++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V ++A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VTAHLDRLATPCMPPLCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL +Q A L+L+ G V
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYT-----QAYN 479
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
SD ++A + V L +I+IAA ++ H + + +WG G+ G+LG
Sbjct: 480 SD----------ALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4273 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSTGKL 4331
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 149/344 (43%), Gaps = 29/344 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG DGQLG G + + P+ N+ + + + CGG H + L G V++ G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLH-----DGSVYTCG 58
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLGH + + P+ V D + IT +S G HS V++ G +F G G GQ
Sbjct: 59 SNSCGQLGHNK--PGITPEFVGALDTQK--ITLVSCGQAHSLAVNEQGQVFAWGAGEEGQ 114
Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LG G + P + + + Q+ CG +H + L KD Q++ +G GQLG+
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKD---GQLFTWGQNTSGQLGLG 171
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD-- 268
K S PQ L I + I+A GD S ALS G ++ WG+ G N D
Sbjct: 172 KGE-PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRA 230
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
V C S + G H LT DG + G G L + P
Sbjct: 231 VPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLP-----R 285
Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG 371
+V L G +V QI G H+ A + + +G HGQLG G
Sbjct: 286 RVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTG 329
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG+ GQLG G + ++ P+ F G + I G HS F+ G ++TCG
Sbjct: 1 MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGR--GLKEIVCGGQHSVFLLHDGSVYTCG 58
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLGH + +P V + + + ++CG HSL + + QV+ +G+G+ G
Sbjct: 59 SNSCGQLGHN--KPGITPEFVGALDTQKITLVSCGQAHSLAVNEQ---GQVFAWGAGEEG 113
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ +V +P++ L D I + ALS +G L+TWG+ N++ +
Sbjct: 114 QLGLGTTET-AVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQ--NTSGQLGL 170
Query: 272 PQSLPSSL-----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS L ++ G +H L+ G V G + G L +
Sbjct: 171 GKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRA 230
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + L KV+ I+ G EH+A +T++ + T+G G GQLG G+T +++ P+
Sbjct: 231 VPCHIKF-----LRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPR 285
Query: 381 VV 382
V
Sbjct: 286 RV 287
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T GQLG G+ +L PQ L + ++ + GG H AL+ + G V
Sbjct: 156 QLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALS-----LSGAV 210
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ +GQLG ++ D P + F + + HIS G H+ ++ G LFT GDG
Sbjct: 211 FGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQK--VVHISCGEEHTAALTKDGGLFTFGDG 268
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
++GQLGHG + P +V + V QI CG H+L G VY FG GQL
Sbjct: 269 SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGG--VYAFGCNSHGQL 326
Query: 214 G 214
G
Sbjct: 327 G 327
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 151/330 (45%), Gaps = 25/330 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G+ + GQLG + ++P+ + +++++CG AH LA+ G+VF+
Sbjct: 54 VYTCGSNSCGQLGHNK--PGITPEFVGALDTQKITLVSCGQAHSLAVNE-----QGQVFA 106
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G GQLG G A+ P+ + HR I + G H +S G LFT G T
Sbjct: 107 WGAGEEGQLGLGTTETAVRIPRLIKRLCDHR--IAQVMCGNQHCIALSKDGQLFTWGQNT 164
Query: 155 FGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G S P + S + +I G HS L L V+G+G K GQL
Sbjct: 165 SGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFAL---SLSGAVFGWGKNKAGQL 221
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR-GFNSTS 267
G++ + R+V P L ++V IS + +AAL+ +G L+T WG+ G ST+
Sbjct: 222 GLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTA 279
Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ P+ + + SQ G +H L G V G + HG L + P
Sbjct: 280 NELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSPYP 339
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ +S V +I G +HS ++ N
Sbjct: 340 LKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 15/229 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WGAG +GQLG G + P+L+ ++ + CG H +AL+ G++
Sbjct: 103 QVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSK-----DGQL 157
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG+ +SGQLG G+ L+P+P+ G + I+AG +HS +S SG +F G
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPQPLKSLAG--IPLAKITAGGDHSFALSLSGAVFGWGK 215
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG D + + P + ++ V I+CG H+ L KD ++ FG G GQ
Sbjct: 216 NKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKD---GGLFTFGDGSWGQ 272
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWG 260
LG + LP+ + L E+ I+ + A + + G +Y +G
Sbjct: 273 LG--HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFG 319
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ G H + L DG V G + G L +P + E V LD K+
Sbjct: 35 LKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLG------HNKP-GITPEFVGALDTQKITL 87
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVN-LGDEFQNRDTQLEVF 398
++ G HS V E + WG GE GQLGLG T + P+++ L D +R Q V
Sbjct: 88 VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCD---HRIAQ--VM 142
Query: 399 CGSGFTYAISR 409
CG+ A+S+
Sbjct: 143 CGNQHCIALSK 153
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ V + CG H + L G V++
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLE-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G +F G G+ G
Sbjct: 59 GCNDLGQLGHEKARKK--PEQVVSLDAQ--NIVAVSCGEAHTLALNDKGQVFAWGLGSDG 114
Query: 157 QLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG P V S ++ Q+ACG HSL L + G +++ +G K GQLG+
Sbjct: 115 QLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR---GGEIFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ V PQV L I ISA G S L+ G ++ WGR G D
Sbjct: 172 GQQG-ACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L + S G +H LT +G V G +G L P
Sbjct: 231 RFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H+ A + + I ++G G +GQLG +TC++I P V
Sbjct: 286 RKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVK 342
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 148/303 (48%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF+G R + + G H+ F+ + G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKR--VRDVGCGRRHTVFLLEDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH ++ P +V S +N+ ++CG H+L L QV+ +G G
Sbjct: 59 GCNDLGQLGHE--KARKKPEQVVSLDAQNIVAVSCGEAHTLALNDK---GQVFAWGLGSD 113
Query: 211 GQLGVS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG+S +D +R +P+ L ++ I ++ S AL+ G +++WG+ G
Sbjct: 114 GQLGLSIVEDCLR---VPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLG 170
Query: 263 FNSTSDVNC-PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
C PQ + S + F Q + G H LT G + G + G L + +
Sbjct: 171 LGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGD--ND 228
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
R V L+ L +V+ I G +H+A +T+ + T+G G +GQLG +T +++P
Sbjct: 229 DRRFPVLLK---TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 28/272 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P + F K V + CG RH++ LL+D VY G
Sbjct: 5 GNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLED---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G ++ WG G
Sbjct: 62 DLGQLGHEKARKK----PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ D + P+++ S + +Q A G+ H L L GE+ G + +G L ++ +
Sbjct: 118 LSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGAC 177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + + +L G+ QI+AG HS +T + AI WG + GQLGLG+ D+ P
Sbjct: 178 V----CSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFP 233
Query: 380 KVVNLGDEFQNRDTQ-LEVFCGSGFTYAISRH 410
++ R Q + + CG T A+++
Sbjct: 234 VLLK-----TLRSQQVVYICCGEDHTAALTKE 260
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 95/182 (52%), Gaps = 12/182 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G+DGQLG + D L P+ + S ++ +ACG H LAL GG++
Sbjct: 104 QVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR-----GGEI 158
Query: 94 FSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FSWG+ GQLG G+ P+ + G + ISAG HS ++ SG +F G
Sbjct: 159 FSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPF--GQISAGGAHSFGLTLSGAIFGWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG GD PV + + ++ V I CG H+ L K+ V+ FG+G GQ
Sbjct: 217 NKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKE---GGVFTFGAGGYGQ 273
Query: 213 LG 214
LG
Sbjct: 274 LG 275
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 110/231 (47%), Gaps = 25/231 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG GQLG G+ + SPQ++ ++ GGAH LT + G +
Sbjct: 157 EIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG G+ D +P + + + +I G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQ--VVYICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QIACG +H+L + ++ FG G GQL
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPS--SGKIDSFGLGGNGQL 327
Query: 214 GVSK--DRI---------RSVSLPQVTIGLHDIE----IVGISANGDRSAA 249
G +RI R+ + P V + + + E + I A GD+S A
Sbjct: 328 GTRSTCNRISPTPVKGCWRAHADPCVELCISEAERSYCVKRIYAGGDQSFA 378
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 139/300 (46%), Gaps = 30/300 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
V++ G GQLG H++ + + SL + +++A CG AH LAL G+V
Sbjct: 55 VYTCGCNDLGQLG----HEKARKKPEQVVSLDAQNIVAVSCGEAHTLALNDK-----GQV 105
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG GS GQLG + D L P T IT ++ G+ HS ++ G +F+ G
Sbjct: 106 FAWGLGSDGQLGLSIVEDCLR-VPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQN 164
Query: 154 TFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG G SP + S QI+ G HS L L ++G+G K GQ
Sbjct: 165 KYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGL---TLSGAIFGWGRNKFGQ 221
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ + R P + L ++V I D +AAL+ EG ++T+G G NST
Sbjct: 222 LGLGDNDDR--RFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNST 279
Query: 267 SDVNCPQSLPSSLS--FSQAALGWNHVLVL---TGDGEVLMLGGS-HHGMLSDPERVSST 320
+ P+ + + SQ A G H L +G + LGG+ G S R+S T
Sbjct: 280 NHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPT 339
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT +
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTENA------ 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTEN-AVYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLP 226
G+ + + +P
Sbjct: 328 GLGLENFTNHFIP 340
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3018 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3071
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3072 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3129
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3130 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3186
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3187 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3244
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3245 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3304
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3305 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3331
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 486 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 540
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 541 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 600
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 657
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 658 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 717
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 718 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 772
Query: 342 AAGAEHS 348
A G S
Sbjct: 773 ACGPAQS 779
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4054 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4106
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4107 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4166
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4167 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4221
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4222 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4243
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4244 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4292
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4293 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4324
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4120
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4121 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4180
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4181 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4237
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4238 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4281
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 521 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 575
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 576 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 635
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 636 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 692
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 693 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4016
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4017 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4073
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4074 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4131
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4132 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4191
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4192 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4246
Query: 379 PKVVN 383
P+ V
Sbjct: 4247 PRQVQ 4251
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3961 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4016
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4017 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4076
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4077 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4131
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4132 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4160
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 434 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 482
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 483 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 538
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 539 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 597
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 598 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 652
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 653 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 680
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2963 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3020
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3021 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3080
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3081 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3135
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3136 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3166
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 489 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 543
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 544 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 603
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 604 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 661
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 662 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 710
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4276 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4334
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 371 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 429
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 430 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 488
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 489 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 534
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 535 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 573
>gi|350419254|ref|XP_003492121.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Bombus impatiens]
Length = 727
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 178/372 (47%), Gaps = 44/372 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIG 90
+ SWGA + GQLG G +E + P ++LS S + + G H L L
Sbjct: 5 LMSWGANSHGQLGQGIESEECVLPCEVDLSKCSLEPKKIKKIVGGAGHTLILDD-----S 59
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V+S G + GQ+G L + + ++ I I+ GW+ S ++ G L
Sbjct: 60 GRVYSCGWNNKGQVGFPTKDSILSFRELNEKLKNK-VIVDIACGWDCSAALTIEGTLLLW 118
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG + + + I+ G+RH+++L +DC ++ G+G +
Sbjct: 119 GSNRFGQLGKHPNSLQWTHEPFEVVTGRKIKGISMGLRHTVLLTEDC---KILVAGTGSK 175
Query: 211 GQLGVSKDRIR-----SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
GQLG+S + + S +V + L DIE +S + A++ +G++Y +G
Sbjct: 176 GQLGLSFSNSKGSLNAAYSFTEV-LTLSDIE--SVSCGQYHTIAVAKDGNIYAFGDNKYG 232
Query: 262 --GFNSTSDVNCPQS-LPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLS 312
G N+ + CP++ +P LS Q L GW+HV+VL D + G + +G L
Sbjct: 233 QLGLNTDA---CPKTFIPIKLSDVQFKLPINMYSGWSHVIVL-NDNNIFGWGRNTYGQLG 288
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ +P ++ NL KV +++AG+EH+ +TEN I+ WGW EHG G G+
Sbjct: 289 I---IKLEKPSIWKATRIENLP--KVHRVSAGSEHNVALTENGEILCWGWNEHGNCGNGH 343
Query: 373 TCDQIHPKVVNL 384
T D P+ + L
Sbjct: 344 TKDVKFPEQLVL 355
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG T GQLG +L + + +L V ++ G H +ALT G++
Sbjct: 276 IFGWGRNTYGQLGIIKLEKPSIWKATRIENLPKVHRVSAGSEHNVALTE-----NGEILC 330
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
WG G G+G D +P+ + + YT I +G HS
Sbjct: 331 WGWNEHGNCGNGHTKDVKFPEQLVL--PYNYTGILIGSGAAHS 371
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 159/358 (44%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLGTGR-LHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG GQLG G L + +S P S + V +ACGG H L L G+V+S
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLME-----DGQVYSC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GQLGH + +P PV T + H I HI+ G +HS +S G L++ G G
Sbjct: 59 GWNGEGQLGHSH--EGTHPAPVATLAEEH---IKHIACGQSHSLALSLQGNLYSWGAGND 113
Query: 156 GQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGH +S P + + + Q++CG H L L D Q++ +G GQLG
Sbjct: 114 GQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDD---GQLFTWGQNTHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN--ST 266
+ I S S PQ L I + ++A G S ALS G ++ WG+ G N
Sbjct: 171 LGNGFI-SQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQV 229
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ C + + G H +LT G + G G L + P
Sbjct: 230 KETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + + +G G+ GQLG G+ + P VV
Sbjct: 286 -RRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG + GQLG+G + +P + ++ G H+ F+ + G +++CG
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLGH +H +P V++ +++ IACG HSL L L +Y +G+G GQ
Sbjct: 61 NGEGQLGHSHEGTHPAP--VATLAEEHIKHIACGQSHSLAL---SLQGNLYSWGAGNDGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----------G 262
LG + S +P++ L +I +S D AL +G L+TWG+ G
Sbjct: 116 LGHATVEHYS-RIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNG 174
Query: 263 FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVSS 319
F S S PQ + S + +Q G +H L+ G V G + G L + E+V
Sbjct: 175 FISQSS---PQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
T V L KV+ I+ G EH+A++T+ + T+G G GQLG + ++I+P
Sbjct: 232 TPC------HVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RRV 288
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T GQLG G + SPQ + ++ + GG+H AL+ + G V
Sbjct: 157 QLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ S+GQLG + P V H+ + +IS G H+ ++ +G LFT G G
Sbjct: 212 FGWGKNSAGQLGLNDEQVKETPCHVKPLRTHK--VVYISCGEEHTAILTKAGGLFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH + +P +V + V QIACG +H+L + +Y FG G GQL
Sbjct: 270 GSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPS--SGTLYAFGCGDLGQL 327
Query: 214 GVSKDRIRSVSLPQVTIG 231
G + +V P V G
Sbjct: 328 GTGHE--NNVKCPTVVKG 343
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 16/197 (8%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+SWG+ GQ+G + H +SPQL+ S + + GG H LALT I G +F
Sbjct: 87 VFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQICAGGHHSLALT-----ISGTIF 141
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+ S GQLG G+ D L+P + +G + +IS G HS ++ +G ++T G G+
Sbjct: 142 AWGKNSFGQLGLGDQQDRLFPTKIQSMNGKH--VRYISCGEEHSVLLTSAGRVYTFGCGS 199
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV-LLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V + V QIACG +H+L ++K GN++Y FG +GQL
Sbjct: 200 SGQLGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLAHVMK---GNKLYSFGLNVKGQL 256
Query: 214 GV-SKDRIRSVSLPQVT 229
G+ S ++ R +P +T
Sbjct: 257 GIGSYEKAR---IPMLT 270
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 34 VKVWSWGAGTDGQLGTGRLH--------DELSPQLLNLSSLSSVSMLACGGAHVLALT-- 83
+ ++SWG QLG L D P + +++ + + CG H L L+
Sbjct: 1 MSMYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGG 60
Query: 84 -----------------SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
+ V G VFSWG GQ+G Y P D
Sbjct: 61 LVYASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHK-YVSPQLVRDLSNC 119
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
I I AG +HS ++ SG +F G +FGQLG GD + P K+ S K+V I+CG
Sbjct: 120 PIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCG 179
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS++L +VY FG G GQLG + +P++ + L + I+
Sbjct: 180 EEHSVLLTS---AGRVYTFGCGSSGQLG--HNEFEDQFIPKMVVDLMGTPVTQIACGRKH 234
Query: 247 SAALSAEGH-LYTWG 260
+ A +G+ LY++G
Sbjct: 235 TLAHVMKGNKLYSFG 249
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 56/296 (18%)
Query: 93 VFSWGRGSSGQLG--------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
++SWG + QLG E +D +P P+ + I I GWNH+ F+S
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILV--NTSFCIEKIICGWNHTLFLS-G 59
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++ G G+LG N+N ++ G V+
Sbjct: 60 GLVYASGLNYDGELGIS---------------NENT-EVPDG--------------HVFS 89
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
+GS + GQ+G++ + VS PQ+ L + I+ I A G S AL+ G ++ WG+
Sbjct: 90 WGSNEFGQVGINSKFHKYVS-PQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWGKNSF 148
Query: 262 ---GFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G D P + S + G H ++LT G V G G L E
Sbjct: 149 GQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQLGHNEF 208
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG 371
P + V +L G V QIA G +H+ A V + + ++G GQLG+G
Sbjct: 209 EDQFIP-----KMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLGIG 259
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 61/256 (23%)
Query: 147 LFTCGDGTFGQLGHGDYR----------SHSSPVKV-SSFVNKNVHQIACGMRHSLVLLK 195
+++ G + QLG + + + +P+ V +SF + +I CG H+L L
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFC---IEKIICGWNHTLFLS- 58
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
G VY G G+LG+S + + +P +GH
Sbjct: 59 ---GGLVYASGLNYDGELGISNE---NTEVP--------------------------DGH 86
Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGS 306
+++WG G NS L LS Q G +H L LT G + G +
Sbjct: 87 VFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWGKN 146
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L ++ P K+ +++G V I+ G EHS ++T + T+G G G
Sbjct: 147 SFGQLGLGDQQDRLFP-----TKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSG 201
Query: 367 QLGLGNTCDQIHPKVV 382
QLG DQ PK+V
Sbjct: 202 QLGHNEFEDQFIPKMV 217
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT +
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTENA------ 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTEN-AVYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLP 226
G+ + + +P
Sbjct: 328 GLGLENFTNHFIP 340
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2956 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3009
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3067
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3068 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3124
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3125 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3182
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3183 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3242
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3243 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3269
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 426 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 480
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 597
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 598 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 657
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 658 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 712
Query: 342 AAGAEHS 348
A G S
Sbjct: 713 ACGPAQS 719
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3992 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4044
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4045 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4104
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4105 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4159
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4160 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4181
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4182 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4230
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4231 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4262
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4058
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4059 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4118
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4175
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4176 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 461 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 515
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 576 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 632
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 633 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3954
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4011
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4012 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4069
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4070 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4129
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4130 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4184
Query: 379 PKVVN 383
P+ V
Sbjct: 4185 PRQVQ 4189
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3899 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3954
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4015 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4069
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4070 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4098
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 422
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 423 YNSDMLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 478
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 479 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 537
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 538 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 592
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 593 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 620
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2901 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3019 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3073
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3074 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3104
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 429 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 483
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 601
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 602 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 650
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4214 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4272
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 151/325 (46%), Gaps = 35/325 (10%)
Query: 36 VWSWGAGTDGQ-----LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
V+ WG G+ LG G L D+L P + SLS V +++ G H AL S
Sbjct: 645 VYMWGRGSVKNPPLSTLGNGSLEDQLLPT--KVESLSEVVLVSIGYYHSAALKS-----N 697
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++ +WG G GQLGHG++++ PK V H +T + G H+ ++ +G +FT
Sbjct: 698 GELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHW--VTQVQCGEKHTICLTKNGKVFTW 755
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLG GD + + +P+ V+S N+ QIACG H VL +V FG+G
Sbjct: 756 GTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTN---AREVLVFGNG-- 810
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
+G + +S+P + L + I +S +AAL+ G +YTWG G N
Sbjct: 811 AAMGSA----NIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQELGHGTN 866
Query: 271 CPQSLPS------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ P S S Q + G H+ LT G++ G G L + +P
Sbjct: 867 QSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQG-DQNKP-- 923
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSA 349
+K+ +L I ++ G H+A
Sbjct: 924 ---KKIDSLLKTTFISVSCGENHNA 945
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 85/206 (41%), Gaps = 54/206 (26%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI----- 89
KV++WG GQLG G +P L+ ++ +ACG H LT+ V+
Sbjct: 751 KVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG 810
Query: 90 --------------------------------------GGKVFSWGRGSSGQLGHGEMVD 111
G V++WG G +LGHG
Sbjct: 811 AAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQS 868
Query: 112 ALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSS 168
L+PK V DG R +I IS G H F++DSG ++TCG FGQLGH GD +
Sbjct: 869 ELHPKLV---DGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGD---QNK 922
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLL 194
P K+ S + ++CG H+ L
Sbjct: 923 PKKIDSLLKTTFISVSCGENHNASLF 948
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
GF + R Q + +R+ + ++P EI IS SAAL+ G +Y WGRG
Sbjct: 602 GFKTEGREQSQATPERLPNFNIP---------EICSISCGSYYSAALTENGDVYMWGRG- 651
Query: 264 NSTSDVNCP-----------QSLPSSL-SFSQAAL---GWNHVLVLTGDGEVLMLGGSHH 308
S N P Q LP+ + S S+ L G+ H L +GE+L G
Sbjct: 652 ---SVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLVSIGYYHSAALKSNGELLTWGCGED 708
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L + ++ T P + V + V Q+ G +H+ +T+N + TWG E+GQL
Sbjct: 709 GQLGHGDVLNQTIP-----KVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQL 763
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
GLG+T P +V +++ +++ CGS
Sbjct: 764 GLGDTQKNCTPMLVTSLEKY----NIIQIACGS 792
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 147 LFTCGDGTFGQLG---HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+ T G + +LG G +S ++P ++ +F + I+CG +S L ++ VY
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTEN---GDVY 646
Query: 204 --GFGSGKRGQL-----GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G GS K L G +D++ LP L E+V +S SAAL + G L
Sbjct: 647 MWGRGSVKNPPLSTLGNGSLEDQL----LPTKVESLS--EVVLVSIGYYHSAALKSNGEL 700
Query: 257 YTWGRGFNST---SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSH 307
TWG G + DV Q++P + +Q G H + LT +G+V G S
Sbjct: 701 LTWGCGEDGQLGHGDV-LNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSE 759
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+G L + + P+ V ++L+ +IQIA G+ H AV+T R ++ +G G
Sbjct: 760 YGQLGLGDTQKNCTPMLV-----TSLEKYNIIQIACGSTHCAVLTNAREVLVFGNG 810
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G +HS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGDHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADEHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-ESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L L KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKL-----LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADEH---IVHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEED 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRAQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLH-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDYKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLHDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDYKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYFP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YFPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D +P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTCDQI-HPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 65/368 (17%)
Query: 8 ETEKGKSALINNAKPKIEEEEEEQQVV----KVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
E GK N+ + +E VV K++ +G+ GQLG G P +
Sbjct: 24 ENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKA 83
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
V + ACG H L T GG V++ G + GQLG G+ + ++FF
Sbjct: 84 LKPEKVKLAACGRNHTLVSTE-----GGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ I +SAG N S +++ G LF GD + GQ+G + + P +V+ + K V I
Sbjct: 139 -EHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT--IGKPVSWI 195
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
+CG HS + D ++Y FG + G+LG+ + + PQ+ + + +++ ++
Sbjct: 196 SCGYYHSAFVTTD---GELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251
Query: 244 GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
G+ + L+ E +YT+G G F Q LG L T
Sbjct: 252 GEHTVVLT-ENAVYTFGLG-----------------QFGQLGLGT--FLFET-------- 283
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
S+P+ + + R +++ I+ G H+A++T+ + T+G G
Sbjct: 284 --------SEPKVIENIRDQTISY-------------ISCGENHTALITDIGLMYTFGDG 322
Query: 364 EHGQLGLG 371
HG+LGLG
Sbjct: 323 RHGKLGLG 330
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCKKQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 36/276 (13%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVF--CGSGFTYAISRH 410
P ++ ++ TQ V+ CG T A+++
Sbjct: 231 YVPNLL------KSLRTQKIVYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 148/337 (43%), Gaps = 30/337 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + P+
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHER--EGNKPEQ 77
Query: 118 V-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSF 175
+ D H I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 78 IGALADQH---IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ + Q++CG H L L D Q + +G GQLG+ K+ S PQ L I
Sbjct: 135 NQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKEYPSQAS-PQRVRSLEGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALG 287
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 191 PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCG 250
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H VLT G V G G L P +V L G +V QIA G +H
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQH 305
Query: 348 S-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ A V + I +G G GQLG G+TC+ P V
Sbjct: 306 TLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G +GQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGAKGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 KGQLGTG----HTCNVKCPSPVK 342
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S P++ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + P+ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASPKLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SP+LL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S P++ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLLGSEECIR---VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + P+ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGLDCKKQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
GQLG K R + P+ + L IV +S + AL+ +G +Y WG
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 263 -FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QASPKLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SP+LL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 32/305 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R I + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--IRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH ++ P V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L +I+IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
+ N P + S L F+Q A G H VLT G + G + G L D +R
Sbjct: 173 YEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T + +L KV+ I G +H+A +T+ + T+G G +GQLG +T +I
Sbjct: 232 VPTL--------LKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 378 HPKVV 382
+P+ V
Sbjct: 284 NPRKV 288
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S P V L I I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QI G +H+ A V + I ++G G +GQLG G T ++ P V
Sbjct: 286 RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK + + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R R P+ L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T + + P+++ S + Q A G+ H L L+ EV G + +G L
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V + +L G+ QIAAG HS V+T + AI WG + GQLGL + D+ P
Sbjct: 178 QNSPHV----IKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVP 233
Query: 380 KVVNLGDEFQNRDTQ--LEVFCGSGFTYAISR 409
++ ++ TQ + + CG T A+++
Sbjct: 234 TLL------KSLRTQKVVHICCGEDHTAALTK 259
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G + SP ++ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + + HI G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK--VVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QI CG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SLS + ++ ACG H LAL+ G
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E P + G + I+AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S + V I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 2650 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT-----VD 2703
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2704 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2761
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2762 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2818
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2819 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2876
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2877 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2936
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 2937 KP-----TLVQGLEGQKITRVACGSSHSVAWT 2963
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 169 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 223
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 224 LEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 283
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 340
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 341 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 400
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 401 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 455
Query: 342 AAGAEHS 348
A G S
Sbjct: 456 ACGPAQS 462
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3751
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3752 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3811
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3812 YGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3868
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3869 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3685 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRG--IEVVDVAAG 3737
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 3738 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3797
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3798 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTK 3852
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + A G H + T DGEV G
Sbjct: 3853 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VA L G KV ++A G+ H+
Sbjct: 3913 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKVNRVACGSAHT 3951
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P+ ++ S V +ACG + A+T+
Sbjct: 204 EVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAE----- 258
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 259 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 318
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 319 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 375
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 376 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L + SG+
Sbjct: 117 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSR-----------SGRVYTQA 165
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 166 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 221
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+++ S+ S QA A G + +T +GE+ G ++G L
Sbjct: 222 VPLEEPKAI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 280
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 281 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 335
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 336 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 363
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 136/309 (44%), Gaps = 32/309 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3647
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S SSP + S + + ++A G +H L L + +VY +G
Sbjct: 3648 GYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3704
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3705 EDGKLGHGSR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3762
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGML----SDP 314
+S S+ L +L + G L LT D V G +G L SD
Sbjct: 3763 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3822
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+V + K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3823 CKVPT---------KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3873
Query: 375 DQIHPKVVN 383
P+ V
Sbjct: 3874 HVRRPRQVQ 3882
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3592 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3647
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3648 GYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3707
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3708 KLGHGSRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3762
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 3763 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 3791
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2595 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2652
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2653 ACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 2713 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2767
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2768 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2798
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 40/274 (14%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACG 186
+T I+ +S SG ++T Y S + +P V ++N+ +IA
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQA-----------YNSDTLAPQLVQGLASRNIVKIAAH 190
Query: 187 M--RHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRSVS-LPQVTIGLHDIEIVG 239
H L L +VY +G G G+LG V + +++S G H +V
Sbjct: 191 SDGHHYLAL---AATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKH---VVH 244
Query: 240 ISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN-- 289
I+ SAA++AEG LYTWGRG S+ D P + L A G
Sbjct: 245 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDA 304
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
L +T +G+V G +G L P +EK+ +LD V+++ G++ S
Sbjct: 305 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSI 359
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+T++ + +WG G++ +LG G +PK++
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 393
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 3907 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSAGKL 3965
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 32/305 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R I + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--IRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH ++ P V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L +I+IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
+ N P + S L F+Q A G H VLT G + G + G L D +R
Sbjct: 173 YEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T + +L KV+ I G +H+A +T+ + T+G G +GQLG +T +I
Sbjct: 232 VPTL--------LKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 378 HPKVV 382
+P+ V
Sbjct: 284 NPRKV 288
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S P V L I I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QI G +H+ A V + I ++G G +GQLG G T ++ P V
Sbjct: 286 RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK + + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R R P+ L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T + + P+++ S + Q A G+ H L L+ EV G + +G L
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V + +L G+ QIAAG HS V+T + AI WG + GQLGL + D+ P
Sbjct: 178 QNSPHV----IKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVP 233
Query: 380 KVVNLGDEFQNRDTQ--LEVFCGSGFTYAISR 409
++ ++ TQ + + CG T A+++
Sbjct: 234 TLL------KSLRTQKVVHICCGEDHTAALTK 259
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G + SP ++ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + + HI G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK--VVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QI CG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SLS + ++ ACG H LAL+ G
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E P + G + I+AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S + V I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 1317 KVYACGEATNGRLGLG-LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 1370
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 1371 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 1428
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 1429 GLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL---VFSWGDG 1485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 1486 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 1543
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 1544 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 1603
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 1604 KP-----TLVQGLEGQKITRVACGSSHSVAWT 1630
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 136/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 2355 GGKHCLALSS-----EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRG--IEVVDVAAG 2407
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 2408 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLC 2467
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 2468 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTK 2522
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 2523 AGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 2544
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G K I IA G+ H TE+ + TWG + GQLG G
Sbjct: 2545 ------VRRP-----RQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 2593
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 2594 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 2625
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 2421
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 2422 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGD 2481
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 2482 YGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTK---AGAVYTWGKGDYHRLG 2538
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL + + I+ + +G +YTWG
Sbjct: 2539 HGSDDHVRR---PRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWG 2582
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRP--VQLIGGEQTLFAVTADGKLYAT 2317
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 2318 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 2374
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 2375 EDGKLGHGSR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 2432
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 2433 HSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2492
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T+ A+ TWG G++ +LG G+
Sbjct: 2493 CKVPM-----KIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRR 2547
Query: 379 PKVVN 383
P+ V
Sbjct: 2548 PRQVQ 2552
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
G++ ++ + ++ +P + L + +V ++ A++ EG +Y G N
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332
Query: 265 -STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
S+ V P+ + SS + A+ G H LT DG+V G G L R++
Sbjct: 1333 LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 1392
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+P + L ++ IA G+ HSA +T + + TWG GE+G+LG G+T Q+ P
Sbjct: 1393 DKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKP 1447
Query: 380 KVVNL 384
K+V +
Sbjct: 1448 KMVKV 1452
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 2577 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 2635
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 180/411 (43%), Gaps = 77/411 (18%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G G+LG G L + SP + + +ACGGAH L LT G+V++ G
Sbjct: 102 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTES-----GRVYATGL 156
Query: 99 GSSGQLG-------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ GQLG E V+ PK HISAG+NHS V+ G L+ G
Sbjct: 157 NNFGQLGISDEKRFSTEPVEVRIPKEA----------MHISAGYNHSCVVTADGELYMWG 206
Query: 152 DGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQLG G + + P KV S + + A G HS+ + G +V+ +G G+
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD---GGEVFSWGDGR 263
Query: 210 RGQLGVSKDR-----IRSVS--LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
G+LG + ++S S P++ L I++ ++A SA + G +Y +G
Sbjct: 264 SGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGER 323
Query: 262 -----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD--- 313
F + P + + L + A G H VLT G++ G + +G L +
Sbjct: 324 ATNRVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGST 383
Query: 314 -----PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG----- 363
PERV P S + V +++ G +H+A ++ AI TWGWG
Sbjct: 384 SVSHLPERVEG--PFSKS----------PVSKVSCGWKHTAAISGG-AIFTWGWGGSHGT 430
Query: 364 -------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLG G+ D + P ++LG+ + ++V CG T AI
Sbjct: 431 FSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVK----VVQVSCGFNHTGAI 477
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 25/239 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
+++ WG ++GQLG G+ + + SL + + A G H +A+ GG+
Sbjct: 201 ELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD-----GGE 255
Query: 93 VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
VFSWG G SG+LGHG L P+ + +G + + H++AG HS V +
Sbjct: 256 VFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIK--VKHVAAGMLHSACVDE 313
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G ++ G+ ++ G+ ++P +S+ + + ++ACG H+ VL K G +Y
Sbjct: 314 NGAVYIFGERATNRVSFGEANKATTPSLISTLL--DCEEVACGGYHTCVLTK---GGDLY 368
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+GS + G LG + LP+ G V + G + A + G ++TWG G
Sbjct: 369 SWGSNENGCLGNGSTSVS--HLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWG 425
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 25/174 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ +G ++ G + +P L+ S+L +ACGG H LT GG ++S
Sbjct: 317 VYIFGERATNRVSFGEANKATTPSLI--STLLDCEEVACGGYHTCVLTK-----GGDLYS 369
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCG-- 151
WG +G LG+G + P+ V +G + ++ +S GW H+ +S G +FT G
Sbjct: 370 WGSNENGCLGNGSTSVSHLPERV---EGPFSKSPVSKVSCGWKHTAAIS-GGAIFTWGWG 425
Query: 152 --DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
GTF GQLGHG + P K+ N V Q++CG H+ +L+
Sbjct: 426 GSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILE 479
>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1041
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 33/337 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG G G+LG G D P+ ++ LACG H A+T G ++
Sbjct: 320 EIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQ-----SGDLY 374
Query: 95 SWGRGSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
SWG G+ LGHG PK VT D ++ ++ G H+ V+ SG LFT GD
Sbjct: 375 SWGDGTHNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGD 433
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK----------DCLGNQV 202
GTFG LGHGD RS S P +V S + V ++ACG+ H+ +++ D QV
Sbjct: 434 GTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQV 493
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G++GQLG + + LP+ I L + I ++ + + ++ GH+YT
Sbjct: 494 FTWGDGEKGQLGHGDNDTK--LLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGST 551
Query: 259 -WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ N T+ N P+ + + S + A G HV VLT E+ G +G L
Sbjct: 552 AYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 611
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L +V I G+ +AV+
Sbjct: 612 NVENKREPAVVGF-----LREKQVKAITCGSNFTAVI 643
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 186/407 (45%), Gaps = 54/407 (13%)
Query: 36 VWSWGAG-TDGQL-GTGR-----LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
V+ WG +DG L GTG D L P+ L + + +ACG H + +T
Sbjct: 262 VFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTK---- 317
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++FSWG G G+LGHG DA PK ++ G + ++ G H+ ++ SG L+
Sbjct: 318 -QGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK--SLACGDFHTCAITQSGDLY 374
Query: 149 TCGDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ GDGT LGHG+ S P +V+ V +ACG H+ V+ Q++ F
Sbjct: 375 SWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS---SGQLFTF 431
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVT---IGL----------HDIEIVGISANGDRSAALSA 252
G G G LG DR RS S+P+ IGL H +V ++ + S+
Sbjct: 432 GDGTFGALG-HGDR-RSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSS 489
Query: 253 EGHLYTWG--------RGFNSTSDV-NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
G ++TWG G N T + C SL ++ + Q A G + + T G V +
Sbjct: 490 RGQVFTWGDGEKGQLGHGDNDTKLLPECVISL-TNENICQVACGHSLTVSRTSRGHVYTM 548
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + +G L +P P V + V V +IA G+ H AV+T I TWG G
Sbjct: 549 GSTAYGQLGNPT-AKGNFPERVEGDIVE----ASVEEIACGSYHVAVLTSKSEIYTWGKG 603
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+GQLG GN ++ P VV E Q + + CGS FT I H
Sbjct: 604 LNGQLGHGNVENKREPAVVGFLREKQVK----AITCGSNFTAVICVH 646
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 189/432 (43%), Gaps = 55/432 (12%)
Query: 6 MEETEKGKSALINNAKPKIEEEEEEQQVVKVWS--WGAGTDGQLGTGRLHDELSPQLLNL 63
M K + A AK K+E + K W WG G G+LG + P L
Sbjct: 1 MRSVIKRRRAYGLTAKNKVELS---GKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRA 57
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
++CGGAH L LT G+VF+ G SSGQLG ++ + PV G
Sbjct: 58 LESHEPCSVSCGGAHTLILTDK-----GRVFATGLNSSGQLGVPLKRESSF-DPVE-VHG 110
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNV 180
HI+AG HS ++ SG + G + GQLG G R+ S +P K+ S +
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGK-RAKSVYITPQKMESLAGMRL 169
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-----DRIRSVS--LPQVTIGLH 233
+A G HSL L + QV +G+ + G LG + D + + P++ L
Sbjct: 170 KALALGTDHSLGLAET---GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLE 226
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
++I +SA SA G +Y++G+ G + +D + P +P S + G
Sbjct: 227 KLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCG 286
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T DG++ G + HG L R SS +PL ++ +L + +I+ G +H
Sbjct: 287 GYHTGAITQDGDIYTWGSNEHGCLGSGFRASS-KPL-----RLESLAEAFMSEISCGWKH 340
Query: 348 SAVVTENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
+A +++ I +WGWG GQLG+G D P + E +R + L
Sbjct: 341 TAAISDGY-IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPI----EMDDRLSAL 395
Query: 396 EVFCGSGFTYAI 407
V CG T AI
Sbjct: 396 HVSCGFNHTAAI 407
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++S+G G+ QLG G +D P + L VS ++CGG H A+T G +++
Sbjct: 249 IYSFGQGSMCQLGLGNNNDASQP--CPIPDLPRVSSISCGGYHTGAITQD-----GDIYT 301
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---- 151
WG G LG G + KP+ ++ IS GW H+ +SD G +F+ G
Sbjct: 302 WGSNEHGCLGSGFRASS---KPLRLESLAEAFMSEISCGWKHTAAISD-GYIFSWGWGGS 357
Query: 152 DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
GT+ GQLG G PV + + ++CG H+ +L++
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEE 410
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 145/321 (45%), Gaps = 39/321 (12%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK----PVTFFDGHRYTI 128
ACG H +ALT G+V+SWG ++G LGHG L PK P+ + +I
Sbjct: 4 ACGKLHTVALTEE-----GRVYSWG-CANGALGHGNSKSQLLPKALDRPLIY---SMPSI 54
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T I+ G H+ V G L+T G +GQLGHGD ++H P +V + K + A G +
Sbjct: 55 TTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQ 114
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
HSLVL + N+VY FGS GQLG+ + +++ + P + L + I+ S
Sbjct: 115 HSLVLTE---ANKVYAFGSNVFGQLGL-ESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170
Query: 249 ALSAEGHLYTWGR--------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD--- 297
AL LY+WGR G +S V ++ Q + G++H + +
Sbjct: 171 ALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAG 230
Query: 298 ------GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+V G G L E S P + V L + +AAG SA +
Sbjct: 231 PGVPPLEKVYTWGRGEEGQLGHDELYSRCVP-----KVVQTLLARGIRAVAAGGFSSAAI 285
Query: 352 TENRAIMTWGWGEHGQLGLGN 372
E + + TWG GQLG G+
Sbjct: 286 DEAKQLYTWGCSREGQLGHGD 306
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 122/286 (42%), Gaps = 68/286 (23%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN---LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+V+SWG +G LG G +L P+ L+ + S+ S++ +ACG H LA+ G
Sbjct: 18 RVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQD-----G 71
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG---------------------------- 123
+++WGR GQLGHG+ P+ V +
Sbjct: 72 TLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSN 131
Query: 124 -----------------------HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH 160
R + HI+ G++HS + S L++ G GQLG
Sbjct: 132 VFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGL 191
Query: 161 GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG------NQVYGFGSGKRGQLG 214
G YRS P ++ F V QI+CG H++ + + G +VY +G G+ GQLG
Sbjct: 192 GHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLG 251
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
D + S +P+V L I ++A G SAA+ LYTWG
Sbjct: 252 --HDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV+++G+ GQLG ++ +P +++ S V + CG +H +AL ++
Sbjct: 124 KVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSE-----QL 178
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSG------- 145
+SWGR GQLG G + P+ +T F + + IS G++H+ FVS+
Sbjct: 179 YSWGRNDCGQLGLGHYRSSPVPEHLTMFK--KSQVQQISCGYDHNIAFVSEYAGPGVPPL 236
Query: 146 -CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
++T G G GQLGH + S P V + + + + +A G S + + Q+Y
Sbjct: 237 EKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDE---AKQLYT 293
Query: 205 FGSGKRGQLGVSKD 218
+G + GQLG D
Sbjct: 294 WGCSREGQLGHGDD 307
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 238 VGISANGDRSAALSAEGHLYTWG-----RGFNSTSDVNCPQSLPSSLSFSQA-----ALG 287
VG + + AL+ EG +Y+WG G ++ P++L L +S A G
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWGCANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACG 60
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H L + DG + G + +G L + + P +V L+ I+ AAG +H
Sbjct: 61 EFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLP-----RRVEALEKKICIKAAAGGQH 115
Query: 348 SAVVTENRAIMTWGWGEHGQLGL 370
S V+TE + +G GQLGL
Sbjct: 116 SLVLTEANKVYAFGSNVFGQLGL 138
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 605 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 658
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 659 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 716
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 717 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 773
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 774 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 831
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 832 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 891
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 892 KP-----TLVQGLEGQKITRVACGSSHSVAWT 918
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 1640 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 1692
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 1693 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 1752
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 1753 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 1807
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 1808 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 1829
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 1830 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 1878
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 1879 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 1910
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 1706
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 1707 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 1766
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 1767 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 1823
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 1824 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1867
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 1602
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 1603 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 1659
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 1660 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 1717
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 1718 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1777
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 1778 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 1832
Query: 379 PKVVN 383
P+ V
Sbjct: 1833 PRQVQ 1837
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 1547 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 1602
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 1603 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 1662
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 1663 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 1717
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 1718 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 1746
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 550 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 607
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 608 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 667
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 668 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 722
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 723 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 753
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 1862 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 1920
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4102
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4162
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4218 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4239
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4240 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4288
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4289 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4320
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4116
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4012
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4070 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4128 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4188 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4242
Query: 379 PKVVN 383
P+ V
Sbjct: 4243 PRQVQ 4247
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4012
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4073 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4128 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4156
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 173/375 (46%), Gaps = 44/375 (11%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P+LLN + + V +ACG H +T G+VFSWG + G+LGH V PK
Sbjct: 196 PRLLNTTHIIDVQSVACGEKHAAIVTK-----QGEVFSWGVDNGGRLGHKVSVSVSDPKI 250
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSF 175
+ R + I+ G H+ VS SG L+ G+GT G G RS P K+
Sbjct: 251 IESLASTR--VKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP 308
Query: 176 VN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
++ ++ +IACG H+ ++ Q++ +G G G LG D + +V+ P+ L
Sbjct: 309 LDGISILKIACGHWHTAIISS---AGQLFAYGDGTFGVLG-HGDTL-TVARPKQVESLKG 363
Query: 235 IEIVGISANGDRSAAL----------SAEGHLYTWG---RGFNSTSDVN------CPQSL 275
+ I+ +AA+ + G L+TWG RG +D C + L
Sbjct: 364 VRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL 423
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
+ F+Q + +VLT G V +G HG L +P + S+ L + L
Sbjct: 424 -NDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP----LSEDTSICLIE-GPLKT 477
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
V +I++G+ H AV+T N + TWG G GQLGLG+ D+ +P +V ++ Q
Sbjct: 478 EFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS--- 534
Query: 396 EVFCGSGFTYAISRH 410
+ CG FT AI H
Sbjct: 535 -IACGFNFTMAICLH 548
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 32/341 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG P+++ + + V +A G H A++ I G+++
Sbjct: 225 EVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVS-----ISGELY 279
Query: 95 SWGRGSS--GQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG G+ G G +P K DG +I I+ G H+ +S +G LF G
Sbjct: 280 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDG--ISILKIACGHWHTAIISSAGQLFAYG 337
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD + + P +V S IACG H+ +++ + +++
Sbjct: 338 DGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 397
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
+G RG+LG + +++ V P L+D + +S ++ L+ G ++T
Sbjct: 398 WGDADRGKLGHADKKMKLV--PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEH 455
Query: 260 GRGFNSTSDVN--CPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
GR N S+ C P F + + G +H+ VLT +G+V G G L +
Sbjct: 456 GRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDY 515
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V + P V L+ +V IA G + + +R +
Sbjct: 516 VDRSYPTL-----VEALEDKQVHSIACGFNFTMAICLHRPL 551
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 29/297 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WG L HG++ A P H + ++ G H+ V+ G +F+ G
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G+LGH S S P + S + V IA G +H+ + + ++Y +G G
Sbjct: 232 DNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAV---SISGELYEWGEGTHC- 287
Query: 213 LGVSKDRI-RSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
LG+ D+ RS P G D I I+ I+ +A +S+ G L+ +G G
Sbjct: 288 LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG 347
Query: 265 STSDVNCPQSLPSSLSFSQAALG---WNHVLVL---------TGDGEVLMLGGSHHGMLS 312
T V P+ + S A+ W+ ++ G++ G + G L
Sbjct: 348 DTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 407
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ P V E +++ D Q++ + V+T + T G EHG+LG
Sbjct: 408 HADKKMKLVPTCV--EPLNDFD---FAQVSCAKAQTIVLTITGVVFTIGSKEHGRLG 459
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H ++
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIF 364
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 173/375 (46%), Gaps = 44/375 (11%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P+LLN + + V +ACG H +T G+VFSWG + G+LGH V PK
Sbjct: 206 PRLLNTTHIIDVQSVACGEKHAAIVTK-----QGEVFSWGVDNGGRLGHKVSVSVSDPKI 260
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSF 175
+ R + I+ G H+ VS SG L+ G+GT G G RS P K+
Sbjct: 261 IESLASTR--VKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP 318
Query: 176 VN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
++ ++ +IACG H+ ++ Q++ +G G G LG D + +V+ P+ L
Sbjct: 319 LDGISILKIACGHWHTAIISS---AGQIFTYGDGTFGVLG-HGDTL-TVARPKQVESLKG 373
Query: 235 IEIVGISANGDRSAAL----------SAEGHLYTWG---RGFNSTSDVN------CPQSL 275
+ I+ +AA+ + G L+TWG RG +D C + L
Sbjct: 374 VRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL 433
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
+ F+Q + +VLT G V +G HG L +P + S+ L + L
Sbjct: 434 -NDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP----LSEDTSICLIE-GPLKT 487
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
V +I++G+ H AV+T N + TWG G GQLGLG+ D+ +P +V ++ Q
Sbjct: 488 EFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS--- 544
Query: 396 EVFCGSGFTYAISRH 410
+ CG FT AI H
Sbjct: 545 -IACGFNFTMAICLH 558
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 152/341 (44%), Gaps = 32/341 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG P+++ + + V +A G H A++ I G+++
Sbjct: 235 EVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVS-----ISGELY 289
Query: 95 SWGRGSS--GQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG G+ G G +P K DG +I I+ G H+ +S +G +FT G
Sbjct: 290 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDG--ISILKIACGHWHTAIISSAGQIFTYG 347
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD + + P +V S IACG H+ +++ + +++
Sbjct: 348 DGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 407
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
+G RG+LG + +++ V P L+D + +S ++ L+ G ++T
Sbjct: 408 WGDADRGKLGHADKKMKLV--PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEH 465
Query: 260 GRGFNSTSDVN--CPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
GR N S+ C P F + + G +H+ VLT +G+V G G L +
Sbjct: 466 GRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDY 525
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V + P V L+ +V IA G + + +R +
Sbjct: 526 VDRSYPTL-----VEALEDKQVHSIACGFNFTMAICLHRPL 561
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 29/297 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WG L HG++ A P H + ++ G H+ V+ G +F+ G
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G+LGH S S P + S + V IA G +H+ + + ++Y +G G
Sbjct: 242 DNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAV---SISGELYEWGEGTHC- 297
Query: 213 LGVSKDRI-RSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
LG+ D+ RS P G D I I+ I+ +A +S+ G ++T+G G
Sbjct: 298 LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHG 357
Query: 265 STSDVNCPQSLPSSLSFSQAALG---WNHVLVL---------TGDGEVLMLGGSHHGMLS 312
T V P+ + S A+ W+ ++ G++ G + G L
Sbjct: 358 DTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 417
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ P V E +++ D Q++ + V+T + T G EHG+LG
Sbjct: 418 HADKKMKLVPTCV--EPLNDFD---FAQVSCAKAQTIVLTITGVVFTIGSKEHGRLG 469
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 32/305 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R I + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR--IRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH ++ P V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KARKRPEHVGALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLATD 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ + +P+ L +I+IV ++ S ALS +++WG+ G
Sbjct: 114 GQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLG 172
Query: 263 FNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERV 317
+ N P + S L F+Q A G H VLT G + G + G L D +R
Sbjct: 173 YEYKKQ-NSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T + +L KV+ I G +H+A +T+ + T+G G +GQLG +T +I
Sbjct: 232 VPTL--------LKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 378 HPKVV 382
+P+ V
Sbjct: 284 NPRKV 288
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 154/357 (43%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + + + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G T G
Sbjct: 59 GCNDLGQLGHEKARKR--PEHVGALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLATDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + Q+ACG HSL L K G++V+ +G K GQLG+
Sbjct: 115 QLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK---GSEVFSWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S P V L I I+A G S L+ G ++ WGR G N +D
Sbjct: 172 GYEYKKQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S + G +H LT +G V G +G L P
Sbjct: 231 YVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QI G +H+ A V + I ++G G +GQLG G T ++ P V
Sbjct: 286 RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK + + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG K R R P+ L IV +S + AL+ +G +Y WG G
Sbjct: 62 DLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117
Query: 263 FNSTSD-VNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T + + P+++ S + Q A G+ H L L+ EV G + +G L
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V + +L G+ QIAAG HS V+T + AI WG + GQLGL + D+ P
Sbjct: 178 QNSPHV----IKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVP 233
Query: 380 KVVNLGDEFQNRDTQ--LEVFCGSGFTYAISR 409
++ ++ TQ + + CG T A+++
Sbjct: 234 TLL------KSLRTQKVVHICCGEDHTAALTK 259
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G + SP ++ + +A GGAH LT + G +
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT-----LSGAI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG + D P + + + HI G +H+ ++ G +FT G G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK--VVHICCGEDHTAALTKEGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH +P KV + V QI CG +H+ + ++Y FG G GQL
Sbjct: 270 GYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPS--SGRIYSFGLGGNGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V++WG TDGQLG + + P+ N+ SLS + ++ ACG H LAL+ G
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPR--NIKSLSEIQIVQVACGYYHSLALSK-----GS 156
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+VFSWG+ GQLG G E P + G + I+AG HS ++ SG +F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPF--AQIAAGGAHSFVLTLSGAIFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D P + S + V I CG H+ L K+ V+ FG+G
Sbjct: 215 GRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKE---GGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 173/375 (46%), Gaps = 44/375 (11%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P+LLN + + V +ACG H +T G+VFSWG + G+LGH V PK
Sbjct: 194 PRLLNTTHIIDVQSVACGEKHAAIVTK-----QGEVFSWGVDNGGRLGHKVSVSVSDPKI 248
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVKVSSF 175
+ R + I+ G H+ VS SG L+ G+GT G G RS P K+
Sbjct: 249 IESLASTR--VKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGP 306
Query: 176 VN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
++ ++ +IACG H+ ++ Q++ +G G G LG D + +V+ P+ L
Sbjct: 307 LDGISILKIACGHWHTAIISS---AGQLFAYGDGTFGVLG-HGDTL-TVARPKQVESLKG 361
Query: 235 IEIVGISANGDRSAAL----------SAEGHLYTWG---RGFNSTSDVN------CPQSL 275
+ I+ +AA+ + G L+TWG RG +D C + L
Sbjct: 362 VRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL 421
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
+ F+Q + +VLT G V +G HG L +P + S+ L + L
Sbjct: 422 -NDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP----LSEDTSICLIE-GPLKT 475
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
V +I++G+ H AV+T N + TWG G GQLGLG+ D+ +P +V ++ Q
Sbjct: 476 EFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHS--- 532
Query: 396 EVFCGSGFTYAISRH 410
+ CG FT AI H
Sbjct: 533 -IACGFNFTMAICLH 546
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 32/341 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG P+++ + + V +A G H A++ I G+++
Sbjct: 223 EVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVS-----ISGELY 277
Query: 95 SWGRGSS--GQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG G+ G G +P K DG +I I+ G H+ +S +G LF G
Sbjct: 278 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDG--ISILKIACGHWHTAIISSAGQLFAYG 335
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DGTFG LGHGD + + P +V S IACG H+ +++ + +++
Sbjct: 336 DGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFT 395
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
+G RG+LG + +++ V P L+D + +S ++ L+ G ++T
Sbjct: 396 WGDADRGKLGHADKKMKLV--PTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEH 453
Query: 260 GRGFNSTSDVN--CPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
GR N S+ C P F + + G +H+ VLT +G+V G G L +
Sbjct: 454 GRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDY 513
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V + P V L+ +V IA G + + +R +
Sbjct: 514 VDRSYPTL-----VEALEDKQVHSIACGFNFTMAICLHRPL 549
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 29/297 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WG L HG++ A P H + ++ G H+ V+ G +F+ G
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G+LGH S S P + S + V IA G +H+ + + ++Y +G G
Sbjct: 230 DNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAV---SISGELYEWGEGTHC- 285
Query: 213 LGVSKDRI-RSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
LG+ D+ RS P G D I I+ I+ +A +S+ G L+ +G G
Sbjct: 286 LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG 345
Query: 265 STSDVNCPQSLPSSLSFSQAALG---WNHVLVL---------TGDGEVLMLGGSHHGMLS 312
T V P+ + S A+ W+ ++ G++ G + G L
Sbjct: 346 DTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 405
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ P V E +++ D Q++ + V+T + T G EHG+LG
Sbjct: 406 HADKKMKLVPTCV--EPLNDFD---FAQVSCAKAQTIVLTITGVVFTIGSKEHGRLG 457
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3017 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3070
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3071 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3128
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3129 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3185
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3186 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3243
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3244 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3303
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3304 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3330
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 426 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 480
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 597
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 598 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 657
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 658 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 712
Query: 342 AAGAEHS 348
A G S
Sbjct: 713 ACGPAQS 719
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4104
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4105 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4164
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4219
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4220 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4241
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4242 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4291 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4322
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4119 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 461 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 515
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 576 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 632
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 633 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 374 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 422
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 423 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 478
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 479 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 537
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 538 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 592
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 593 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 620
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4014
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4072 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4129
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4130 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4190 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4244
Query: 379 PKVVN 383
P+ V
Sbjct: 4245 PRQVQ 4249
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4014
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4075 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4129
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4130 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4158
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2962 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3019
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3020 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3079
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3080 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3134
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3135 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3165
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 429 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 483
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 484 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 543
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 544 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 601
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 602 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 650
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4332
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2923 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2976
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2977 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR--IRDIAYGSSHSAPLTSSGELYTW 3034
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3035 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3091
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3092 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3149
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3150 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3209
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3210 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3236
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 391 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 445
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 446 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 505
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 562
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 563 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 622
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H LVLT D EV G + D V+ P + LD ++ I
Sbjct: 623 IDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFP-----GLDSKHIVGI 677
Query: 342 AAGAEHS 348
A G S
Sbjct: 678 ACGPAQS 684
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3959 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4011
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4012 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4071
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4072 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4126
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4127 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4148
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4149 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4197
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4198 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4229
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4025
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4026 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4085
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4086 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4142
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4143 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4186
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 426 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 480
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 481 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 540
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 541 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 597
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A L+ + +++WG
Sbjct: 598 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3921
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3922 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3978
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3979 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4036
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4037 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4096
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4097 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4151
Query: 379 PKVVN 383
P+ V
Sbjct: 4152 PRQVQ 4156
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3866 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3921
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3922 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3981
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3982 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4036
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4037 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4065
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 339 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 387
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 388 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 443
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 444 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 502
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 503 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 557
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 558 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 585
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2868 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2925
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2926 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2985
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 2986 DDGKLGHFSRMNCDKP-----RLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYG 3040
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3041 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3071
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 394 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 448
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 449 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 508
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 509 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 566
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 567 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 615
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4181 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4239
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 276 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 334
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 335 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 393
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 394 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 439
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 440 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 478
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 30/298 (10%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
++ ++ G NHS F+ + G ++TCG T GQLGH R + P ++ + ++N+ +ACG
Sbjct: 82 SVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE--REGNKPEQIGALADQNIVHVACG 139
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HSL L Q++ +G+G GQLG+ SV++P++ L+ I+ +S
Sbjct: 140 ESHSLALSDR---GQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWH 195
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLT 295
AL+A+G +TWG+ NS + + PS S +Q A G H L+
Sbjct: 196 CLALAADGQFFTWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 253
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G V G ++ G L + P V L + KV+ I+ G EH+AV+T++
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSG 308
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
+ T+G G GQLG + D+++P+ V +G E R L SG YA
Sbjct: 309 GVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 366
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 146/336 (43%), Gaps = 28/336 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
PQ+ S SV +ACGG H + L G+V++ G + GQLGH + KP
Sbjct: 72 PQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTCGLNTKGQLGHEREGN----KP 122
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFV 176
I H++ G +HS +SD G LF+ G G+ GQLG S + P +
Sbjct: 123 EQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN 182
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
+ + Q++CG H L L D Q + +G GQLG+ K+ S + PQ L I
Sbjct: 183 QQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQASPQRVRSLEGIP 238
Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGW 288
+ ++A G S ALS G ++ WG G + D P L + + G
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGE 298
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H VLT G V G G L P +V L G +V QIA G +H+
Sbjct: 299 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP-----RRVLELMGSEVTQIACGRQHT 353
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
A V + I +G G GQLG G+TC+ P V
Sbjct: 354 LAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 389
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 204 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 258
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 259 FAWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 316
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 317 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 374
Query: 214 G 214
G
Sbjct: 375 G 375
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 21/247 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWGAG+DGQLG D ++ P+L+ + ++ ++CG H LAL + G+
Sbjct: 151 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA-----DGQF 205
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG+ S GQLG G E P+ V +G + ++AG HS +S SG +F G
Sbjct: 206 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEG--IPLAQVAAGGAHSFALSLSGAVFAWGM 263
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG D SP V + V I+CG H+ VL K V+ FG+G GQ
Sbjct: 264 NNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK---SGGVFTFGAGSCGQ 320
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRGFNS------ 265
LG D + P+ + L E+ I+ + A + G +Y +G G
Sbjct: 321 LG--HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGH 378
Query: 266 TSDVNCP 272
T +V CP
Sbjct: 379 TCNVKCP 385
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 21/224 (9%)
Query: 171 KVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+V F+ +++V ++ACG HS+ LL+D +VY G +GQLG ++ + P+
Sbjct: 73 QVCGFISDRSVKEVACGGNHSVFLLED---GEVYTCGLNTKGQLGHEREGNK----PEQI 125
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSL---S 280
L D IV ++ S ALS G L++WG G +T D L L +
Sbjct: 126 GALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
Q + G H L L DG+ G + HG L + P + ++V +L+G+ + Q
Sbjct: 186 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLG----LGKEFPSQASPQRVRSLEGIPLAQ 241
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+AAG HS ++ + A+ WG GQLGL + D+ P V L
Sbjct: 242 VAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKL 285
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 258 VFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 312
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 313 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 370
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 371 RGQLGTG----HTCNVKCPSPVK 389
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2764 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2817
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2818 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2875
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2876 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2932
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2933 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2990
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2991 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3050
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3051 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 143/308 (46%), Gaps = 25/308 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ L+S + V + A G H LAL + G+V+SWG G +LGHG+ V
Sbjct: 457 DTLVPQLVQGLASRNVVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGRRLGHGDTVP 511
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 512 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 571
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 628
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 629 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 688
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 689 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 743
Query: 342 AAGAEHSA 349
A G S+
Sbjct: 744 ACGPAQSS 751
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3799 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3851
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 3852 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3911
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3912 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3966
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3967 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3988
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3989 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4037
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4038 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4069
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3865
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3866 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3925
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3926 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3982
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3983 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4026
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G +LG G P++++ S V +ACG + A+T+
Sbjct: 492 EVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 546
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 547 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 606
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 607 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 663
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 664 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 711
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L++ ++ G+
Sbjct: 405 WGLIGWKYYANVIGPIQCKGLANLGVTQIACAEKRLLIVXRN-----------GRVXTQA 453
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + +PQ+ GL +V I+A+ D AL+A G +Y+WG G T
Sbjct: 454 YNSDTL----VPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDT 509
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 510 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 568
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 569 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 623
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 624 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 651
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLLAVTADGKLYAT 3761
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3762 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3818
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3819 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3876
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 3877 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3936
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3937 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3991
Query: 379 PKVVN 383
P+ V
Sbjct: 3992 PRQVQ 3996
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3706 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLLAVTADGKLYAT 3761
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3762 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3821
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3822 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3876
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 3877 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 3905
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2709 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2766
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2767 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2826
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 2827 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2881
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2882 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2912
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 26/231 (11%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
P V ++NV +IA H L L +VY +G G +LG D + + P
Sbjct: 461 PQLVQGLASRNVVKIAAHSDGHHYLAL---AATGEVYSWGCGDGRRLG-HGDTV-PLEEP 515
Query: 227 QVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP 276
+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 516 KVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA 575
Query: 277 --SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
L A G L +T +G+V G +G L P +EK+ +
Sbjct: 576 GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQD 633
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 634 LD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 681
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4021 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4079
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 189/432 (43%), Gaps = 55/432 (12%)
Query: 6 MEETEKGKSALINNAKPKIEEEEEEQQVVKVWS--WGAGTDGQLGTGRLHDELSPQLLNL 63
M K + A AK K+E + K W WG G G+LG + P L
Sbjct: 1 MRSVIKRRRAYGLTAKNKVEVS---GKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRA 57
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
++CGGAH L LT G+VF+ G SSGQLG ++ + PV G
Sbjct: 58 LESHEPCSVSCGGAHTLILTDK-----GRVFATGLNSSGQLGVPLKSESSF-DPVE-VHG 110
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNV 180
HI+AG HS ++ SG + G + GQLG G R+ S +P K+ S +
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGK-RAKSVYITPQKMESLAGMRL 169
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-----DRIRSVS--LPQVTIGLH 233
+A G HSL L + QV +G+ + G LG + D + + P++ L
Sbjct: 170 KALALGTDHSLGLAET---GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLE 226
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
+++ +SA SA G +Y++G+ G + +D + P +P S + G
Sbjct: 227 KLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCG 286
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H +T DG++ G + HG L R SS +PL ++ +L + +I+ G +H
Sbjct: 287 GYHTGAITQDGDIYTWGSNEHGCLGSGFRASS-KPL-----RLESLAEAFMSEISCGWKH 340
Query: 348 SAVVTENRAIMTWGWG------------EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
+A +++ I +WGWG GQLG+G D P + E +R + L
Sbjct: 341 TAAISDGY-IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPI----EMDDRLSAL 395
Query: 396 EVFCGSGFTYAI 407
V CG T AI
Sbjct: 396 HVSCGFNHTAAI 407
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++S+G G+ QLG G +D P + L VS ++CGG H A+T G +++
Sbjct: 249 IYSFGQGSMCQLGLGNNNDASQP--CPIPDLPRVSSISCGGYHTGAITQD-----GDIYT 301
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---- 151
WG G LG G + KP+ ++ IS GW H+ +SD G +F+ G
Sbjct: 302 WGSNEHGCLGSGFRASS---KPLRLESLAEAFMSEISCGWKHTAAISD-GYIFSWGWGGS 357
Query: 152 DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
GT+ GQLG G PV + + ++CG H+ +L++
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILEE 410
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 3273 KVYACGEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 3326
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3327 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3384
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3385 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3441
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3442 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3499
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3500 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3559
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3560 KP-----TLVHGLEGQKITRVACGSSHSVAWT 3586
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 741 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 795
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 796 LEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 855
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 856 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 912
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 913 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 972
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 973 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 1027
Query: 342 AAGAEHS 348
A G S
Sbjct: 1028 ACGPAQS 1034
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4306 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVADVAAG 4358
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4359 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4418
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4419 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4473
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4474 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4495
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4496 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4544
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4545 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4576
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V+ +A GGAH +T+ G ++
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTA-----AGDLY 4372
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4373 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4432
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4433 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4489
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4490 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4533
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 776 EVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAE----- 830
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 831 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 890
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 891 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 947
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 948 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4268
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4269 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4325
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+ ++A G SA ++A G LYTWG+G
Sbjct: 4326 EDGKLGHGNR--SPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4383
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4384 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4443
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4444 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4498
Query: 379 PKVVN 383
P+ V
Sbjct: 4499 PRQVQ 4503
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V QIAC + L+L ++ G+
Sbjct: 689 WGLIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRN-----------GRVYTQA 737
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 738 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 793
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 794 VPLEEPKVI-STFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 852
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 853 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 907
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 908 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 935
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 4213 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4268
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4269 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4328
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V +AAG HSA VT + TWG G +G+LG
Sbjct: 4329 KLGHGNRSPCDRP-----RVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4383
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4384 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4412
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 3218 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3275
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3276 ACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3335
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3336 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3390
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3391 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3421
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 28/233 (12%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIR 221
+P V ++N+ +IA H L L +VY +G G G+LG V + +
Sbjct: 744 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLGHGDTVPLEEPK 800
Query: 222 SVS-LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQS 274
+S G H +V I+ SAA++AEG LYTWGRG S+ D P
Sbjct: 801 VISTFSGKQAGKH---VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 857
Query: 275 LP--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ L A G L +T +G+V G +G L P +EK+
Sbjct: 858 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKL 915
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 916 QDLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 965
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L ++ + A+ DR S+ S +G L
Sbjct: 626 GPLSPNESFLRYLTLPQDNELAIDLRQTAVI-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 684
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL +Q A L+L+ +G V
Sbjct: 685 EVIGWGLIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT-----QAYN 739
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
SD ++A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 740 SD----------TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 789
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 790 HGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAIT 828
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4528 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4586
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKR--IRDIAYGSSHSAPLTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H LVLT D EV G + D V+ P + LD ++ I
Sbjct: 713 IDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFP-----GLDSKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4217 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4238
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4239 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4288 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4319
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 115/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A L+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 379 PKVVN 383
P+ V
Sbjct: 4242 PRQVQ 4246
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4011
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4072 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4127 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4155
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 483
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 484 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
[Arabidopsis thaliana]
Length = 1028
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 159/337 (47%), Gaps = 33/337 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG G G+LG G D P+ ++ LACG H A+T G ++
Sbjct: 307 EIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQ-----SGDLY 361
Query: 95 SWGRGSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
SWG G+ LGHG PK VT D ++ ++ G H+ V+ SG LFT GD
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTG-DLQGLYVSDVACGPWHTAVVASSGQLFTFGD 420
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK----------DCLGNQV 202
GTFG LGHGD RS S P +V S + V ++ACG+ H+ +++ D QV
Sbjct: 421 GTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQV 480
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G++GQLG + + LP+ I L + I ++ + + ++ GH+YT
Sbjct: 481 FTWGDGEKGQLGHGDNDTK--LLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGST 538
Query: 259 -WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ N T+ N P+ + + S + A G HV VLT E+ G +G L
Sbjct: 539 AYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 598
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L +V I G+ +AV+
Sbjct: 599 NVENKREPAVVGF-----LREKQVKAITCGSNFTAVI 630
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 186/407 (45%), Gaps = 54/407 (13%)
Query: 36 VWSWGAG-TDGQL-GTGR-----LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
V+ WG +DG L GTG D L P+ L + + +ACG H + +T
Sbjct: 249 VFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTK---- 304
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++FSWG G G+LGHG DA PK ++ G + ++ G H+ ++ SG L+
Sbjct: 305 -QGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK--SLACGDFHTCAITQSGDLY 361
Query: 149 TCGDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ GDGT LGHG+ S P +V+ V +ACG H+ V+ Q++ F
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVAS---SGQLFTF 418
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVT---IGL----------HDIEIVGISANGDRSAALSA 252
G G G LG DR RS S+P+ IGL H +V ++ + S+
Sbjct: 419 GDGTFGALG-HGDR-RSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSS 476
Query: 253 EGHLYTWG--------RGFNSTSDV-NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
G ++TWG G N T + C SL ++ + Q A G + + T G V +
Sbjct: 477 RGQVFTWGDGEKGQLGHGDNDTKLLPECVISL-TNENICQVACGHSLTVSRTSRGHVYTM 535
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + +G L +P P V + V V +IA G+ H AV+T I TWG G
Sbjct: 536 GSTAYGQLGNPT-AKGNFPERVEGDIVE----ASVEEIACGSYHVAVLTSKSEIYTWGKG 590
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+GQLG GN ++ P VV E Q + + CGS FT I H
Sbjct: 591 LNGQLGHGNVENKREPAVVGFLREKQVK----AITCGSNFTAVICVH 633
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2708 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2761
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2762 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2819
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2820 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2876
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2877 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2934
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2935 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2994
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 2995 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3021
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3743 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3795
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 3796 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3855
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3856 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3910
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3911 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3932
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3933 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3981
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 3982 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4013
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3809
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3810 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3869
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3870 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3926
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3927 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3970
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 141/337 (41%), Gaps = 83/337 (24%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 435 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 489
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 490 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 549
Query: 170 VKVSSFVNKNVHQIACG--------------MRHSL----VLLKDCLGNQVYGFGSGKRG 211
+ V+ V +ACG R S+ VL C+ V F +
Sbjct: 550 MLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVESF---RYN 606
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
QLGV + R R PQ + G+ R L ++ GR
Sbjct: 607 QLGVGCRCRQRGWEPPQEDLKF----FYGVLT---RDVMLREGQIVFEAGR--------- 650
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P +P+ +S + ALG+ ++ GG SS P
Sbjct: 651 -PGCVPTPVSSQKQALGY------------IVCGG-----------CSSLGP-------- 678
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G KVI +AAG+ H +TE+ + +WG + Q
Sbjct: 679 ----GKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 711
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3705
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3706 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3762
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3763 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3820
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 3821 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3880
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3881 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3935
Query: 379 PKVVN 383
P+ V
Sbjct: 3936 PRQVQ 3940
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3650 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3705
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3706 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3765
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3766 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3820
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 3821 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 3849
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2653 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2710
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2711 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2770
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 2771 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2825
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2826 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2856
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 105/255 (41%), Gaps = 54/255 (21%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 383 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 431
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 432 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 487
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 488 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 546
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTEN---RAIMTW----------GWGE 364
P+ VA L G+KVI +A G+ + VTEN R + W G E
Sbjct: 547 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWRSVLGILCVSGVVE 601
Query: 365 ---HGQLGLGNTCDQ 376
+ QLG+G C Q
Sbjct: 602 SFRYNQLGVGCRCRQ 616
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN- 289
GL ++ + I+ R LS G +YT + +NS D PQ + S + + +
Sbjct: 402 GLANLGVTQIACAEKRFLILSRNGRVYT--QAYNS--DTLAPQLVQGLASRNIVKIAAHS 457
Query: 290 ---HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
H L L GEV G G L + V P ++ G V+ IA G+
Sbjct: 458 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFS-GKQAGKHVVHIACGST 516
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
+SA +T + TWG G +G+LG G++ D+ P +V + ++V CGSG
Sbjct: 517 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLK----VIDVACGSG 568
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 470 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 524
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
G++++WGRG+ G+LGHG D P V G
Sbjct: 525 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG 557
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 3965 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4023
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 320 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 378
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P ++L +Q A L+L+ +G V
Sbjct: 379 EVIGWGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT-----QAYN 433
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
SD ++A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 434 SD----------TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 483
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 484 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 522
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4078 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4130
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4131 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4190
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4191 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4245
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4246 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4267
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4268 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4316
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4317 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4348
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4144
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4145 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4204
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4205 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4261
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4262 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4305
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4040
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4041 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4097
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4098 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4155
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4156 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4215
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4216 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4270
Query: 379 PKVVN 383
P+ V
Sbjct: 4271 PRQVQ 4275
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3985 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4040
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4041 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4100
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4101 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4155
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4156 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4184
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4300 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4358
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 187/402 (46%), Gaps = 47/402 (11%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+ VVKV GA + R D L P+ L + + V +ACG H +T
Sbjct: 247 ENVVKV---GAEKSASYFSPRT-DILLPRPLESNVVLDVLQIACGVKHAALVTR-----Q 297
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++F+WG S G+LGHG + + P+ V T+ ++ G H+ V+ +G L+T
Sbjct: 298 GELFTWGEESGGRLGHGVGKNVVQPRLVEAMAS--TTVDFVACGEFHTCAVTMAGELYTW 355
Query: 151 GDGTF--GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
GDGT G LGHG SH P +++ V + CG H+ ++ Q++ FG
Sbjct: 356 GDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITST---GQLFTFGD 412
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG-----------DRSAALSAEGHL 256
G G LG DR +VS P+ L + + ++ +S+A + G L
Sbjct: 413 GTFGVLG-HGDR-ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKL 470
Query: 257 YTWGRGFNST-----SDVNC-PQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+TWG G + D P +PS + +F + A G + + LT G V +G + +
Sbjct: 471 FTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGLTTSGRVFTMGSTVY 530
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L +P+ S L +E G V +IA GA H AV+T + TWG G +G+L
Sbjct: 531 GQLGNPQ---SDGKLPCLVE--DKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRL 585
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G G+ D+ P +V + ++R + + CGS ++ AI H
Sbjct: 586 GHGDVEDRKSPTLV---EALKDRHVKY-IACGSNYSSAICLH 623
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 174/396 (43%), Gaps = 46/396 (11%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G G+LG G L + P + +++ +ACGGAH L LT G V++ G
Sbjct: 37 WGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTED-----GCVYATGL 91
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG E +P+ F G + ISAG+NHS ++ G L+ G T GQL
Sbjct: 92 NDFGQLGVSES-KHYSVEPLCVF-GEEKKVVQISAGYNHSCAITVDGELYMWGKNTSGQL 149
Query: 159 GHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
G G + P+ KV N+ A G HS V + D G + +G G G+LG
Sbjct: 150 GLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHS-VAISD--GGAAFSWGIGVSGRLGHG 206
Query: 217 KD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RG-----F 263
+ + S P++ L I++ ++A SA G ++ +G RG
Sbjct: 207 HESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFGERGIEKLRL 266
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
SD P + S + A G H VLT GE+ G + +G L + S+ +
Sbjct: 267 KEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLG----IGSSDVI 322
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EHGQLGLG 371
+ + V Q++ G +H+A ++E R + TWGWG GQLG G
Sbjct: 323 HLPEKVQGPFLKSSVSQVSCGWKHTAAISEGR-VFTWGWGGSNGTFSEVGHSSSGQLGHG 381
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ D I+P V G++ + L+V CG T AI
Sbjct: 382 SDVDYINPTRVCFGEDVK----ALQVSCGFNHTGAI 413
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 25/268 (9%)
Query: 134 GWNHSGFVSDSGCLFTC--GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
G+ F D+G F G+G +G+LG G+ S PV +F NK ++ IACG H+L
Sbjct: 19 GFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTL 78
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L +D VY G GQLGVS+ + SV P G + ++V ISA + S A++
Sbjct: 79 FLTED---GCVYATGLNDFGQLGVSESKHYSVE-PLCVFG-EEKKVVQISAGYNHSCAIT 133
Query: 252 AEGHLYTWGRGFNSTSDVNCPQSLPS------------SLSFSQAALGWNHVLVLTGDGE 299
+G LY WG+ N++ + + P+ ++ AALG H + ++ G
Sbjct: 134 VDGELYMWGK--NTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGA 191
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEK----VSNLDGVKVIQIAAGAEHSAVVTENR 355
G G L S E + +L+G+KV +AAG +SA EN
Sbjct: 192 AFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENG 251
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +G +L L D P +++
Sbjct: 252 CVFVFGERGIEKLRLKEMSDATKPSLIS 279
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 25/239 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG T GQLG G+ + P + L ++ M A G H +A++ GG
Sbjct: 137 ELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD-----GGA 191
Query: 93 VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
FSWG G SG+LGHG L P+ + +G + + +++AG +S +
Sbjct: 192 AFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIK--VKYVAAGLLNSACTDE 249
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+GC+F G+ +L + + P +S + ++ACG H+ VL ++Y
Sbjct: 250 NGCVFVFGERGIEKLRLKEMSDATKPSLISELPSSK--EVACGGYHTCVLTNS---GELY 304
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+GS + G LG+ + + LP+ G V + G + A +EG ++TWG G
Sbjct: 305 TWGSNENGCLGIGSSDV--IHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWG 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 46 QLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
+L + D P L+ S L S +ACGG H LT+ G++++WG +G LG
Sbjct: 263 KLRLKEMSDATKPSLI--SELPSSKEVACGGYHTCVLTNS-----GELYTWGSNENGCLG 315
Query: 106 HGEMVDALYPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG----DGTF---- 155
G P+ V F + +++ +S GW H+ +S+ G +FT G +GTF
Sbjct: 316 IGSSDVIHLPEKVQGPFL---KSSVSQVSCGWKHTAAISE-GRVFTWGWGGSNGTFSEVG 371
Query: 156 ----GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
GQLGHG + +P +V + Q++CG H+ +L+
Sbjct: 372 HSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 415
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ +L+S + V + A G H LAL++ G+VFSWG G G+LGHG+ V
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++IV + S AL+ +G +YTWG+G N + V P+ L
Sbjct: 653 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 131/305 (42%), Gaps = 30/305 (9%)
Query: 57 SPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
+P LL + +A GG H LAL+S G+V+SWG G+LGHG
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDR 4086
Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS 174
P+ + G + ++AG HS ++ +G LFT G G +G+LGHGD P V +
Sbjct: 4087 PRVIESLRG--IEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEA 4144
Query: 175 FVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
V IACG +L L D + V+ +G G G+LG + +P L
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSL 4199
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWG-------RGFNSTSDVNCPQSLP--SSLSFSQ 283
+ +V + S AL+ G +YTW G S V P+ +
Sbjct: 4200 TGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4259
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H + T DGEV G + G L D + RP VA L G K+ ++A
Sbjct: 4260 IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVAC 4314
Query: 344 GAEHS 348
G+ H+
Sbjct: 4315 GSAHT 4319
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+++ S+LS V +ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 685
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G +F
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITA-----AGDLF 4118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K F R G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHG 4238
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4239 -SDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4014
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA +T + TWG G +G+LG
Sbjct: 4075 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4130 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 4158
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + S P++ N V Q+AC + L+L ++ +VY + S G
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQVACAEKRFLILSRN---GRVYTQAYNSDTLG- 484
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ L IV I+A+ D ALSA G +++WG G
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ + S+LS QA A G + +T +GE+ G ++G L
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 646 CKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 142/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 3018 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 3077
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3134
Query: 213 LGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG D + V + L H + V + ++ AL+ EG +++WG G
Sbjct: 3135 LG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3252
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3253 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 3309 -GLEGQK---ITRVACGSSHSVA 3327
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 149/379 (39%), Gaps = 73/379 (19%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4014
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
+ G+LG P+V L IE+V ++A G SA ++A G L+TWG+ G
Sbjct: 4072 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----SD- 313
+ D P+ + + + + G L LT D V G +G L SD
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 314 ---PERVSSTRPL-----------SVALEK-----------------------------V 330
P ++ S L SVAL K V
Sbjct: 4190 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQV 4249
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQ 389
L G KVI IA G+ H TE+ + TWG + GQLG G T P++V L +
Sbjct: 4250 QGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKI 4309
Query: 390 NRDTQLEVFCGSGFTYAIS 408
NR V CGS T A S
Sbjct: 4310 NR-----VACGSAHTLAWS 4323
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4333
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 163/383 (42%), Gaps = 48/383 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGGK 92
VW+WG + GQLG G LSP + S L+ V +A G H LALT+ G+
Sbjct: 76 VWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAK-----GE 130
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-TITHISAGWNHSGFVSDSGCLFTCG 151
V++WG S GQLG G + P V + I + G HS V+ G ++ G
Sbjct: 131 VWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWG 190
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQ+G G ++ +P +V F V +A G HSL L D V+ +G +
Sbjct: 191 SNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVD---GTVWAWGDNE 247
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIE-----IVGISANGDRSAALSAEGHLYTWGR--- 261
GQLG D R + QV +H ++ +V I+A S AL+ +G ++ WG
Sbjct: 248 FGQLGDCSDYDRKAPV-QV---MHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNGV 303
Query: 262 ---------GF-NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
GF V +P + A G H L L DG VL G G L
Sbjct: 304 GQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANG-RHSLALMNDGSVLAWGAGDRGQL 362
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ P +L V I +AAG HS V EN A++ WG + GQLG+G
Sbjct: 363 GQGAQNHEDHPTLASLHSV--------ICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414
Query: 372 NTCDQIHP---KVVNLGDEFQNR 391
H K V G F +R
Sbjct: 415 KADKNFHALPEKTVVSGSPFISR 437
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 138/293 (47%), Gaps = 27/293 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP---QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+VW+WG + GQLG G ++ SP + + + L ++ ACGG H LA+ S G
Sbjct: 130 EVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASD-----G 184
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V++WG S GQ+G G + + P+ V F + ++AG+ HS +S G ++ G
Sbjct: 185 TVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWG 244
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
D FGQLG +PV+V V++ NV IA G SL L +D +V+ +G+
Sbjct: 245 DNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRD---GEVWAWGNN 301
Query: 209 KRGQLGVSKDR--IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW------- 259
GQLG+ +R + G+ + I+ANG S AL +G + W
Sbjct: 302 GVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361
Query: 260 -GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G+G + D SL S + A G H L + +G VL G + G L
Sbjct: 362 LGQGAQNHEDHPTLASLHSVICL---AAGRYHSLAVAENGAVLAWGDNQKGQL 411
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 146/338 (43%), Gaps = 42/338 (12%)
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-IT 129
+ A GG H L + + G V++WG SSGQLG G +L P V G +
Sbjct: 59 IAAGGGYHSLVVKND-----GTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVL 113
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI---ACG 186
++AG HS ++ G ++T GD + GQLG G + SPVKV + I ACG
Sbjct: 114 KVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACG 173
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
+HSL + D V+ +GS GQ+G + R + G + ++A
Sbjct: 174 GKHSLAVASD---GTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAH 230
Query: 247 SAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLT 295
S ALS +G ++ WG ++ + V S+ L A A G L LT
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290
Query: 296 GDGEVLMLG---------GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
DGEV G G H+G + D PL V L GV+ I A
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRD--------PLPVRAANGVPLKGVRA--ITANGR 340
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
HS + + +++ WG G+ GQLG G + HP + +L
Sbjct: 341 HSLALMNDGSVLAWGAGDRGQLGQGAQNHEDHPTLASL 378
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 173/382 (45%), Gaps = 48/382 (12%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D P+ L + L V +ACG H +T G+VFSWG G+LGHG D L
Sbjct: 292 DSFVPKALESAVLLDVQTIACGRRHAALVTK-----QGEVFSWGEELGGRLGHGVDSDVL 346
Query: 114 YPKPVTFFDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPV 170
+PK DG + T + ++ G HS V+ SG L+T G + G LG+ + S+ P
Sbjct: 347 HPK---LVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPK 403
Query: 171 KVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
K++ +V ++CG H+ V+ Q++ FG G G LG DR RSVS P+
Sbjct: 404 KLNGPLEGIHVAAVSCGPWHTAVVTS---SGQLFTFGDGTFGVLG-HGDR-RSVSTPREV 458
Query: 230 IGLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRG---------FNSTSD 268
L + V + +AA+ + G L+TWG G S
Sbjct: 459 ESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLV 518
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
C +L +F Q A G + + LT G V +G +G L +P+ P+ V +
Sbjct: 519 PTCVAALVEP-NFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQ-ADGKLPVRVEGK 576
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
N V ++ GA H AV+T + TWG G +G+LG G+T D+ P +V +
Sbjct: 577 LSKNF----VEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDK 632
Query: 389 QNRDTQLEVFCGSGFTYAISRH 410
Q + V CG+ FT AI H
Sbjct: 633 QVKS----VVCGTSFTAAICLH 650
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 144/298 (48%), Gaps = 31/298 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G+LG G D L P+L++ ++V ++ACG H A+T + G ++
Sbjct: 325 EVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVT-----LSGDLY 379
Query: 95 SWGRGSS---GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG GSS G LG+ PK + +G + +S G H+ V+ SG LFT
Sbjct: 380 TWG-GSSHNCGLLGYRNEASNWVPKKLNGPLEG--IHVAAVSCGPWHTAVVTSSGQLFTF 436
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDGTFG LGHGD RS S+P +V S + ACG+ H+ +++ +G+ +
Sbjct: 437 GDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGK 496
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--- 258
++ +G G +G+LG R V P L + ++ + AL+ GH+YT
Sbjct: 497 LFTWGDGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGS 554
Query: 259 --WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+G+ N +D P + LS + G HV VLT EV G +G L
Sbjct: 555 PVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRL 612
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGNPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQ--TISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGN--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 158/350 (45%), Gaps = 39/350 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG + GQLG G D ++P + ++ L+ V +A G H LAL G V++
Sbjct: 121 VWAWGGNSSGQLGDGTTTDRVTP--MQVAGLTDVVAVAAGDFHSLALRGD-----GTVWA 173
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G L P+PV +G + ++AG++ + V D G + G +
Sbjct: 174 WGTNFHGQLGRGHTEPGLTPEPVPGLEG----VVALAAGFDFTLAVMDDGTVRAWGANSS 229
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + +PV+V+ + + G H++ L KD V+ +G+ GQLG
Sbjct: 230 GQLGDGTFTQRLAPVEVAHI--SGISAVTAGTYHAVALGKD---GGVWTWGANSSGQLGD 284
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGR------GFNSTSD 268
R+V P GL ++ V A+ D S+ AL G + WG G + T D
Sbjct: 285 GAWSDRAV--PARVPGLERVKAV---ASMDASSLALLEAGSVLAWGANGSGQLGDSGTDD 339
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPLSVA 326
P +P S + G H L L GDG + GG G L ER PL
Sbjct: 340 RATPGEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPL--- 396
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
L V +AAG+ HS + + +WG +GQLG G T ++
Sbjct: 397 ------LRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAER 440
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 160/356 (44%), Gaps = 37/356 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D P + +S L+SV +A GG+H +AL G V++
Sbjct: 471 VWAWGRNAAGQLGDGSTRDRARP--VAVSGLTSVVAVATGGSHTMALRGD-----GTVWA 523
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G VD L P V D ++ ++AG S + G ++T G+G
Sbjct: 524 WGYNALGQLGDGTTVDRLTPVRVARLD----SVVAVAAGTYFSMALRGDGTVWTWGEGFE 579
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQ+G G PV+V+ N V ++A G H+L + D V+ +G GQLG
Sbjct: 580 GQVGDGGGVQRLFPVQVAGLTN--VTRVAAGSAHALAVRGD---GTVWAWGDNGEGQLGD 634
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSDVNC- 271
DR R V +P +T I +S S AL +G + WG G+ D
Sbjct: 635 GTWSDRFRPVQVPGLT------GITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFT 688
Query: 272 ----PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P +P HVL L DG + G + G L S+RP+
Sbjct: 689 SRVRPAVVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPV---- 744
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L +V ++A G H+ +V + A++ WG GQLG G T + P +V
Sbjct: 745 -QVRGLG--RVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVR 797
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 157/386 (40%), Gaps = 51/386 (13%)
Query: 23 KIEEEEEEQQV--VKVWS--------------WGAGTDGQLGTGRLHDELSPQLLNLSSL 66
+IE + Q V V+ W+ WG GQLG G +P ++ L
Sbjct: 1098 RIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVR--GL 1155
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
+ V ++ G H LAL S G V++WG GQLG G + P V
Sbjct: 1156 TGVVAVSTGAWHSLALRSD-----GTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ---- 1206
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ I AG H+ V G ++ G FGQLG G S PV+V NV +A G
Sbjct: 1207 KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGL--SNVTSVAGG 1264
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HSL LL D + +G+ GQLG D + +V + D +V + A
Sbjct: 1265 DHHSLALLAD---GSLGAWGNNAAGQLG---DGTGTTRYSRVWVKGVD-GVVEVRAGAAH 1317
Query: 247 SAALSAEGHLYTWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
+ AL +G ++TWG G +ST P+ +P + G H + G
Sbjct: 1318 TLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPKG 1377
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V G + HG L + + PL +V L V V+ + GA+ S + + +
Sbjct: 1378 TVWAWGRNSHGQLGLGDNANRAEPL-----RVKELAEVSVV--SGGADFSLAMQRDGTVS 1430
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNL 384
+WG HG LGLG + P V L
Sbjct: 1431 SWGSSLHGALGLGTAGQRSSPGQVAL 1456
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 165/377 (43%), Gaps = 41/377 (10%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WGA + GQLG G L+P + ++ +S +S + G H +AL G V++WG
Sbjct: 223 AWGANSSGQLGDGTFTQRLAP--VEVAHISGISAVTAGTYHAVALGKD-----GGVWTWG 275
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SSGQLG G D P V + + + ++ S + ++G + G GQ
Sbjct: 276 ANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDAS----SLALLEAGSVLAWGANGSGQ 331
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG ++P +V ++V + G +H+L L D ++ +G G GQLG
Sbjct: 332 LGDSGTDDRATPGEVPGL--RSVAAVVGGAQHALALRGD---GTLWAWGGGLAGQLGHGG 386
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
V P + + ++ ++A S A +G +++WGR G +T++ +
Sbjct: 387 SERHVVPAPLLRL----ADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHA 442
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
+ A +H L + DG V G + G L D RP++V S
Sbjct: 443 AVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPVAV-----S 497
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN 390
L V+ +A G H+ + + + WG+ GQLG G T D++ P +V L
Sbjct: 498 GL--TSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVARL------ 549
Query: 391 RDTQLEVFCGSGFTYAI 407
D+ + V G+ F+ A+
Sbjct: 550 -DSVVAVAAGTYFSMAL 565
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 159/384 (41%), Gaps = 44/384 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+WG+ GQLG G+ L+P + + + V + H +AL + G V
Sbjct: 1074 AWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMAD-----GTVQ 1128
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G P V G + +S G HS + G ++ G
Sbjct: 1129 AWGDNAHGQLGDGTTERRAAPVVVRGLTG----VVAVSTGAWHSLALRSDGTVWAWGANG 1184
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S ++PV+V+ + V I G H+L + D V+ +G GQLG
Sbjct: 1185 FGQLGDGTTLSRTTPVRVAGL--QKVVAIGAGGYHALAVRSD---GSVWAWGYNAFGQLG 1239
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGRGF-----NST 266
++ R+ LP GL ++ V A GD S AL A+G L WG + T
Sbjct: 1240 DGTAESRL----LPVRVEGLSNVTSV---AGGDHHSLALLADGSLGAWGNNAAGQLGDGT 1292
Query: 267 SDVNCPQSLPSSLS-FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ + + G H L L GDG V G + H L + + TR +
Sbjct: 1293 GTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTR---I 1349
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
V L GV I AGA HS V + WG HGQLGLG+ ++ P V
Sbjct: 1350 VPRPVPGLSGVTAI--GAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKEL 1407
Query: 386 DEFQNRDTQLEVFCGSGFTYAISR 409
E V G+ F+ A+ R
Sbjct: 1408 AEVS------VVSGGADFSLAMQR 1425
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 142/355 (40%), Gaps = 29/355 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA GQLG G + P ++ L +A GG LAL + G ++
Sbjct: 821 VWAWGANGRGQLGDGTTASRVIPARVD--GLQGAVAVAAGGDASLALLAD-----GTAWA 873
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G D P + I ++ G H + G L+ G
Sbjct: 874 WGANAHGQLGDGSTSDRAVPGQLKLPS----NIMSVALGETHGLAAGEDGALWAWGANGS 929
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V + V ++ G SL + +D + +G+ GQLG
Sbjct: 930 GQLGEGSTTPSPTPVRVKGL--EGVASVSAGRAFSLAVRQD---GTAWAWGANPSGQLGD 984
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSD 268
+ + V P+ + + +SA AL +G ++TWG S
Sbjct: 985 GTNHSQRV--PKQVTSVKRVRA--MSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPT 1040
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P+ +P A G + + G G + +G L D + P+ V +E
Sbjct: 1041 WMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIE 1100
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V+ ++ A A+H+ + + + WG HGQLG G T + P VV
Sbjct: 1101 ASKLRQPVRTVR--AWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVR 1153
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 124 HRYTIT----HISAGWNHSGFVSDSGCLFTCGDGTFGQL-GHGDYRSHSSPVKVSSFVNK 178
R T+T I+AG HS +VS +G ++ G T GQL G +P + S +
Sbjct: 43 QRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS--PR 100
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIE 236
++ + G HSL L D G V+ +G GQL G + DR+ P GL D
Sbjct: 101 DIVSVVSGEAHSLAL--DEAGT-VWAWGGNSSGQLGDGTTTDRV----TPMQVAGLTD-- 151
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNS------TSDVNCPQSLPSSLSFSQAALGWNH 290
+V ++A S AL +G ++ WG F+ T P+ +P A G++
Sbjct: 152 VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDF 211
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L + DG V G + G L D P+ VA ++ G+ + AG H+
Sbjct: 212 TLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVA-----HISGISAVT--AGTYHAVA 264
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ ++ + TWG GQLG G D+ P V
Sbjct: 265 LGKDGGVWTWGANSSGQLGDGAWSDRAVPARV 296
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 142/353 (40%), Gaps = 32/353 (9%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQLG G P L+ + V +A G H LAL G V++WG
Sbjct: 773 AWGENASGQLGDGTTTHRAGPVLVR--GVPCVRSVASGVLHSLALACD-----GSVWAWG 825
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G + P V DG + + + G ++D G + G GQ
Sbjct: 826 ANGRGQLGDGTTASRVIPARV---DGLQGAVAVAAGGDASLALLAD-GTAWAWGANAHGQ 881
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G + P ++ + N+ +A G H L +D ++ +G+ GQLG +
Sbjct: 882 LGDGSTSDRAVPGQLK--LPSNIMSVALGETHGLAAGED---GALWAWGANGSGQLG--E 934
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
P GL + V SA S A+ +G + WG G +
Sbjct: 935 GSTTPSPTPVRVKGLEGVASV--SAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRV 992
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P+ + S + G +HV+ L DG V G + G L D ++ P + +V
Sbjct: 993 PKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGD----GTSAPTWMWPRQVP 1048
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L V+ + AAG + S V WG E+GQLG G T ++ P V +
Sbjct: 1049 ELRDVEAV--AAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRI 1099
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--VDALYPKPVTFFDGHRYTIT 129
+A G H L SP+ G V++WG +SGQLG GE + L P P+ I
Sbjct: 54 IAAGSQHSL-YVSPT----GAVWAWGGNTSGQLG-GEATPLQRLAPAPLP----SPRDIV 103
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
+ +G HS + ++G ++ G + GQLG G +P++V+ +V +A G H
Sbjct: 104 SVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLT--DVVAVAAGDFH 161
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
SL L D V+ +G+ GQLG + P+ GL +V ++A D + A
Sbjct: 162 SLALRGD---GTVWAWGTNFHGQLG--RGHTEPGLTPEPVPGLEG--VVALAAGFDFTLA 214
Query: 250 LSAEGHLYTWGRGFNSTSDVN--------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
+ +G + W G NS+ + P + S G H + L DG V
Sbjct: 215 VMDDGTVRAW--GANSSGQLGDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVW 272
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L D P +V L+ VK +A+ S + E +++ WG
Sbjct: 273 TWGANSSGQLGDGAWSDRAVP-----ARVPGLERVKA--VASMDASSLALLEAGSVLAWG 325
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
GQLG T D+ P V
Sbjct: 326 ANGSGQLGDSGTDDRATPGEV 346
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQLG G S + + + V + G AH LAL G V++WG
Sbjct: 1279 AWGNNAAGQLGDGTGTTRYS--RVWVKGVDGVVEVRAGAAHTLALRGD-----GTVWTWG 1331
Query: 98 RGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+ QLG G+ + P+PV G +T I AG HS V G ++ G +
Sbjct: 1332 DNTHSQLGAGDDSTRTRIVPRPVPGLSG----VTAIGAGARHSFAVGPKGTVWAWGRNSH 1387
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD + + P++V +V ++ G SL + +D V +GS G LG+
Sbjct: 1388 GQLGLGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRD---GTVSSWGSSLHGALGL 1442
Query: 216 SKDRIRS----VSLP 226
RS V+LP
Sbjct: 1443 GTAGQRSSPGQVALP 1457
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3005 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3058
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3059 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3116
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3117 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3173
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3174 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3231
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3232 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3291
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3292 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3318
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3989 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4041
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4042 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4101
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4102 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4156
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4157 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4178
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4179 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4227
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4228 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4259
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4001 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4055
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4056 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4115
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4116 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4172
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4173 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4216
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2950 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3007
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3008 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3067
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3068 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3122
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3123 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3153
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4211 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4269
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3007 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3060
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3061 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3118
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3119 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3175
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3176 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3233
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3234 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3293
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3294 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3320
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4042 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4094
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4095 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4154
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4155 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4209
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4210 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4231
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4232 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4280
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4281 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4312
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4108
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4109 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4169 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4225
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4226 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4269
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4004
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4005 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4061
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4062 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4119
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4120 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4179
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4180 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4234
Query: 379 PKVVN 383
P+ V
Sbjct: 4235 PRQVQ 4239
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3949 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4004
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4005 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4064
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4065 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4119
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4120 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4148
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2952 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3009
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3010 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3069
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3070 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3124
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3125 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3155
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4264 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4322
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 171/389 (43%), Gaps = 43/389 (11%)
Query: 36 VWSWGAGTDGQLGTGRLH--DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V++WG G+LG G +L P+ + V + CGG H LA T G V
Sbjct: 896 VYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTE-----SGSV 950
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG G GQLG G+ P P+ + +T ++AG+ H+ V SG + G G
Sbjct: 951 YGWGNGRIGQLGLGDRTLHWLPVPIKTL--RKMHVTQLAAGYAHTIVVLKSGEVMVFGGG 1008
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + P K+ + ++ Q ACG H+ +L + +VY GS GQL
Sbjct: 1009 EVGQLGTGMRKDLLVPTKLQAM--PSIVQAACGYCHTALLTE---AGEVYTCGSAMSGQL 1063
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + P++ GL+ I I+ + A++ ++YTWG + SD Q
Sbjct: 1064 GHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQ 1123
Query: 274 SLPSSL---------------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV- 317
+++ S + G H + T DGEV + S G L P +
Sbjct: 1124 ERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVW--SSTGSLQPPLLLR 1181
Query: 318 ---------SSTRPLSV-ALEKVSNLDGVKVIQ-IAAGAEHSAVVTENRAIMTWGWGEHG 366
++ PL V A+ + V++ AAG E + VVTEN + +WG G G
Sbjct: 1182 GSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFG 1241
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
QLGLG+ D+ V +E + R +L
Sbjct: 1242 QLGLGDQGDRAEIVQVAKSEESRRRSVRL 1270
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 28/247 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V +G G GQLGTG D L P L ++ S+ ACG H LT G+V+
Sbjct: 1001 EVMVFGGGEVGQLGTGMRKDLLVPT--KLQAMPSIVQAACGYCHTALLTE-----AGEVY 1053
Query: 95 SWGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG- 151
+ G SGQLGH + + D L PK V +G R I I+ G H+ ++D ++T G
Sbjct: 1054 TCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKR--IRFIACGSFHTIAITDLDNVYTWGG 1111
Query: 152 ------DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD--------- 196
DG Q +P V + K + ++CG HS+ D
Sbjct: 1112 VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171
Query: 197 -CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
L + GSG G ++ + ++P + +A + + ++ G
Sbjct: 1172 GSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGL 1231
Query: 256 LYTWGRG 262
LY+WG G
Sbjct: 1232 LYSWGSG 1238
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT--CDQIHPKVVNLGDEFQNRDTQ 394
+V+ ++ G H A +TEN + TWG G+LG G+ Q+HPK V F+++ +
Sbjct: 876 QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIF---FKSKCVK 932
Query: 395 LEVFCGSGFTYA 406
EV CG T A
Sbjct: 933 -EVVCGGEHTLA 943
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 21/268 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + +V+ +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNDEGQLGLGDTEERT-TFHRVSFFTSQHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGRGFNSTSDVNCPQSL----PSSLSFSQA----ALGWNHVLVLTGDGEVL 301
L+ +G L+ WG NS + P L P ++ + + G+ H +T DGE+
Sbjct: 155 LTEDGRLFMWGD--NSEGQIGLPNILNACVPHQVTIGKPVSWISCGYYHSAFVTTDGELY 212
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
+ G S +G L P + S + + ++ KVIQ+A G EHS V+TE+ A+ T+G
Sbjct: 213 IFGESENGKLGLPNELLSNHRIPQLVPEIPE----KVIQVACGGEHSVVLTED-AVYTFG 267
Query: 362 WGEHGQLGLGNTC-DQIHPKVV-NLGDE 387
G+ GQLGLG + PKVV N+G++
Sbjct: 268 LGQFGQLGLGTLLFETSEPKVVENIGNK 295
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 24/287 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G GQLG G+ + V+FF ++ I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNDEGQLGLGDTEERTTFHRVSFFTS-QHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLPNILNACVPHQVT--IGKPVSWISCGYYHSAFVTTD---GELYIFGESENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FN 264
+ + + + +PQ+ + + +++ ++ G+ S L+ E +YT+G G
Sbjct: 224 LPNELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLT-EDAVYTFGLGQFGQLGLGTLLF 281
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
TS+ +++ + + S + G NH +LT +G + G HG L
Sbjct: 282 ETSEPKVVENI-GNKTISYISCGENHAALLTDNGLMYTFGDGRHGKL 327
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + PQL+ V +ACGG H + LT +
Sbjct: 210 ELYIFGESENGKLGLPNELLSNHRIPQLVP-EIPEKVIQVACGGEHSVVLTEDA------ 262
Query: 93 VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G ++ + PK V G++ TI++IS G NH+ ++D+G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTLLFETSEPKVVENI-GNK-TISYISCGENHAALLTDNGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ + +P +F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVF 364
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 41/389 (10%)
Query: 41 AGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
A + GQLG G + D P L + ++L +V ++ GG H +T G+VF G+
Sbjct: 2 ANSYGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITED-----GEVFVCGQ 56
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G + D + G T+T+++ GW+ + F++DSG + +CG FGQL
Sbjct: 57 NHRGQLGLGHLTDI---STLQRCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQL 113
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G G ++++ V++ + V +A G+RHSL + Q +G G + + +S
Sbjct: 114 GIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQ-WGIGLMSQAKRTLSPS 172
Query: 219 RIR---SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVN 270
+ S LP + GL+ ++A L+ G L+ WG +S ++
Sbjct: 173 PVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQLLSSEPFLS 232
Query: 271 CPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P + SL + L GW H++ T G V G ++G L S +
Sbjct: 233 SPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQST 292
Query: 327 L--------EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
E+V L G QI G+EH+ + R +++WGW EHG G G+ D
Sbjct: 293 TEDQEVRLPEEVPALQGAT--QITCGSEHNLAILGGR-LLSWGWNEHGMCGDGSHADVFQ 349
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
P++V L + CG+G + A+
Sbjct: 350 PQLV-------PALRPLLIGCGAGHSMAV 371
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ +L+S + V + A G H LAL++ G+VFSWG G G+LGHG+ V
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++IV + S AL+ +G +YTWG+G N + V P+ L
Sbjct: 653 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D R++ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+ G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4052 GGKHCLALS-----FEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4104
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G LFT G G +G+LGHGD P V + V IACG +L
Sbjct: 4105 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4219
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4220 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4241
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4242 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4291 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4322
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G +F
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLF 4118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+++ S+LS V +ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 685
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4014
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDG 4074
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ IAAG HSA +T + TWG G +G+LG
Sbjct: 4075 KLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4130 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 4158
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + S P++ N V Q+AC + L+L ++ +VY + S G
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVMQVACAEKRFLILSRN---GRVYTQAYNSDTLG- 484
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ L IV I+A+ D ALSA G +++WG G
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ + S+LS QA A G + +T +GE+ G ++G L
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 646 CKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 675
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 142/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 3018 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 3077
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3134
Query: 213 LGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG D + V + L H + V + ++ AL+ EG +++WG G
Sbjct: 3135 LG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3252
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3253 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 3309 -GLEGQK---ITRVACGSSHSVA 3327
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 134/306 (43%), Gaps = 26/306 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4014
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L +VY +G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL---SFEGEVYSWGEA 4071
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
+ G+LG RS P+V L IE+V I+A G SA ++A G L+TWG+
Sbjct: 4072 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + D P+ + + + + G L LT D V G +G L
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4188
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4189 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4243
Query: 378 HPKVVN 383
P+ V
Sbjct: 4244 RPRQVQ 4249
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4332
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 155/359 (43%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG+ G+LG G + DE P+ ++ S+V +ACG + +A+T GKV
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKE-----GKV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+S G GQLGH + L P + I+ G H+ V++ G LF+ G
Sbjct: 56 YSCGNNDYGQLGHEKARKRLQLIP----GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCN 111
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVH-QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG ++ + NV QIACG HS+ L D ++Y +GS + GQ
Sbjct: 112 MNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTND---GELYAWGSNREGQ 168
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ + P+ L + I I+ G + +S G +++WGR G N
Sbjct: 169 LGLGSYTTTEIK-PKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDV 227
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N P L + + A G + LT DG V G +G L + P
Sbjct: 228 QQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILP-- 285
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V L G V QI+ G H+ + +R + WG G GQLG + P+VV
Sbjct: 286 ---RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ +GQLG G E+ P+ ++ + ++ +ACGG H + ++ G V
Sbjct: 157 ELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISK-----SGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
FSWGR + GQLG ++ P + + + + + G S F++ G +FTCG G
Sbjct: 212 FSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAK--VCYATCGEEFSVFLTMDGGVFTCGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG+ + P +V + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 270 MYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPS--RGRVYAWGLGGAGQL 327
Query: 214 GVSKDRIRSVSLPQVTI 230
G +S + PQV +
Sbjct: 328 GNRAS--QSATTPQVVL 342
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLH-DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG +GQLG + E P+++ + + + +ACG H +ALT+ G++
Sbjct: 104 QLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN-----DGEL 158
Query: 94 FSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++WG GQLG G + PK ++ I I+ G H+ +S SG +F+ G
Sbjct: 159 YAWGSNREGQLGLGSYTTTEIKPKRISTLAA--VPIAFIACGGYHTIVISKSGAVFSWGR 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
TFGQLG D + + P ++ + N V CG S+ L D V+ G+G GQ
Sbjct: 217 NTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMD---GGVFTCGAGMYGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRG 262
LG + LP+ + L + IS + AL + G +Y WG G
Sbjct: 274 LG--HGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 322
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 94/240 (39%), Gaps = 58/240 (24%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+F G G+LG G + P +V NV QIACG +++ + K+ +VY
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKE---GKVYS 57
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G+ GQLG K R R +P GL I+ + A++ G L++WG N
Sbjct: 58 CGNNDYGQLGHEKARKRLQLIP----GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMN 113
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
LG N V ERV R +
Sbjct: 114 -------------------GQLGLNSV--------------------DCTERVP--RMIK 132
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPKVVN 383
V V ++QIA G EHS +T + + WG GQLGLG+ T +I PK ++
Sbjct: 133 VLGTNV-------IVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRIS 185
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 61/354 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
K+++WG G G+LG G +P+ + +L+++ M + CGG +AL S G
Sbjct: 149 KLFTWGEGQYGRLGHGDEESISTPK--QVVALANIPMKYVFCGGRSTIAL---SHTAGSG 203
Query: 93 VFSWGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+++WG GQLG G+ D P+ V R + + AG + + + SG LFT
Sbjct: 204 LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKR--LVALDAGASRAAVIDSSGALFTW 261
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G G+LGHGD + P VSS V +A G HSL L K +++ +G G+
Sbjct: 262 GRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTK---AGELFSWGRGEN 318
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
GQLG + + ++ Q+ + +I+GISA G S A +G +Y WG
Sbjct: 319 GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWG---------- 368
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D +L G S G ++ P+R+ R
Sbjct: 369 ------------------------MSDYGILGTGDSDDGAINIPQRILMPR--------- 395
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
G++ I+ G +H+ +T + I +WG G G+LG N +Q P N+
Sbjct: 396 ----GIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNI 445
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 25/287 (8%)
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GS+ + LYP+ I ++AG H +S SG LFT G+G +G+L
Sbjct: 111 GSNNNNDDDKYFTKLYPEE---------RIILVNAGAAHIAMISQSGKLFTWGEGQYGRL 161
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
GHGD S S+P +V + N + + CG R S + L G+ +Y +G+ + GQLG
Sbjct: 162 GHGDEESISTPKQVVALANIPMKYVFCGGR-STIALSHTAGSGLYTWGNNEFGQLGRGDC 220
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCP 272
LP+ +V + A R+A + + G L+TWGRG + T + P
Sbjct: 221 GDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQP 280
Query: 273 QSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+L SSL ALG H L LT GE+ G +G L S + +A ++
Sbjct: 281 -TLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGH----GSYQSQQLAPKQ 335
Query: 330 VSNL-DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ D K+I I+AG HS ++ ++ WG ++G LG G++ D
Sbjct: 336 LQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDD 382
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++WG GQLG G D+ + P+ + + + L G + + S G +
Sbjct: 204 LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDS-----SGAL 258
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WGRG G+LGHG+ + P V+ GH + ++ G HS ++ +G LF+ G G
Sbjct: 259 FTWGRGDHGRLGHGDTENRYQPTLVSSLYGH--VVVAVALGGGHSLALTKAGELFSWGRG 316
Query: 154 TFGQLGHGDYRSHS-SPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLGHG Y+S +P ++ FV+ + I+ G HS+ L D VY +G G
Sbjct: 317 ENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDD---GSVYAWGMSDYG 373
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------FN 264
LG ++++PQ + I IS + AL+++ +Y+WG G FN
Sbjct: 374 ILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFN 433
Query: 265 STSD-----VNCPQSLPSSLS---FSQAALGWNHVLVLTGDG 298
+ N P P S S +G + +V T G
Sbjct: 434 EKNQCAPIACNIPNYQPVVFSAGEISTIVIGKKNTVVATSSG 475
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 237 IVGISANGDRSAALSAEGHLYTWGRG------------FNSTSDVNCPQSLPSSLSFS-- 282
I+ ++A A +S G L+TWG G ++ V ++P F
Sbjct: 131 IILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGG 190
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
++ + +H G G + G + G L R + E V+ +++ +
Sbjct: 191 RSTIALSHT---AGSG-LYTWGNNEFGQLG---RGDCGDDFTCLPESVAVPGAKRLVALD 243
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
AGA +AV+ + A+ TWG G+HG+LG G+T ++ P +V
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLV 283
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 12/76 (15%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRD 392
++I + AGA H A+++++ + TWG G++G+LG G+ PK V N+ ++
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKY---- 185
Query: 393 TQLEVFCGSGFTYAIS 408
VFCG T A+S
Sbjct: 186 ----VFCGGRSTIALS 197
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
Length = 1103
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 175/391 (44%), Gaps = 79/391 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG + G+LG G D P+L+ +L++ SSV +ACG H A+T + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355
Query: 94 FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ G LGHG + PK + +G + +S G H+ ++ G LFT
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEG--LHVASVSCGPWHTALITSYGRLFTF 413
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDGTFG LGHGD + P +V S ++CG+ H+ +++ + +
Sbjct: 414 GDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 473
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G + +LG +GD+ L
Sbjct: 474 LFTWGDGDKNRLG----------------------------HGDKDPRLK---------- 495
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSS 319
P +P+ + ++ + H L LT G+V +G + +G L + +
Sbjct: 496 ----------PTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDG 544
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P V + S V +I+ GA H A +T + TWG G +G+LG G+ D+ P
Sbjct: 545 KLPCLVEDKLASEF----VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVP 600
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+V + ++R + + CGS +T AI H
Sbjct: 601 TIV---EALKDRHVKY-IACGSNYTAAICLH 627
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V QIA G H+A VT I TWG G+LG G D HP++V
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 327
>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1103
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 175/391 (44%), Gaps = 79/391 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG + G+LG G D P+L+ +L++ SSV +ACG H A+T + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355
Query: 94 FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ G LGHG + PK + +G + +S G H+ ++ G LFT
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEG--LHVASVSCGPWHTALITSYGRLFTF 413
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDGTFG LGHGD + P +V S ++CG+ H+ +++ + +
Sbjct: 414 GDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 473
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G + +LG +GD+ L
Sbjct: 474 LFTWGDGDKNRLG----------------------------HGDKDPRLK---------- 495
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSS 319
P +P+ + ++ + H L LT G+V +G + +G L + +
Sbjct: 496 ----------PTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDG 544
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P V + S V +I+ GA H A +T + TWG G +G+LG G+ D+ P
Sbjct: 545 KLPCLVEDKLASEF----VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVP 600
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+V + ++R + + CGS +T AI H
Sbjct: 601 TIV---EALKDRHVKY-IACGSNYTAAICLH 627
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V QIA G H+A VT I TWG G+LG G D HP++V
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 327
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2301 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2354
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2355 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2412
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2413 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2469
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2470 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2527
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2528 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 2587
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 2588 KP-----TLVQGLEGQKITRVACGSSHSVAWT 2614
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3336 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3388
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 3389 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3448
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3449 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3503
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3504 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3525
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3526 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3574
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 3575 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 3606
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3402
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3403 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3462
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3463 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3519
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3520 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3563
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 135/306 (44%), Gaps = 26/306 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3298
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3299 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3355
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3356 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3412
Query: 264 -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ L +L + G L LT D V G +G L
Sbjct: 3413 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3472
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3473 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3527
Query: 378 HPKVVN 383
P+ V
Sbjct: 3528 RPRQVQ 3533
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3243 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3298
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3299 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3358
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3359 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3413
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 3414 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 3442
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2246 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2303
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2304 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 2364 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2418
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2419 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2449
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 3558 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 3616
>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
motifs [Arabidopsis thaliana]
Length = 1108
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 176/391 (45%), Gaps = 79/391 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG + G+LG G D P+L+ +L++ SSV +ACG H A+T + G++
Sbjct: 306 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 360
Query: 94 FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ G LGHG + PK + +G + +S G H+ ++ G LFT
Sbjct: 361 YTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEG--LHVASVSCGPWHTALITSYGRLFTF 418
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDGTFG LGHGD + P +V S ++CG+ H+ +++ + +
Sbjct: 419 GDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 478
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G G + +LG +GD+ L
Sbjct: 479 LFTWGDGDKNRLG----------------------------HGDKDPRLK---------- 500
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSS 319
P +P+ + ++ + H L LT G+V +G + +G L + + +
Sbjct: 501 ----------PTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGN---LQT 547
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L +E L V +I+ GA H A +T + TWG G +G+LG G+ D+ P
Sbjct: 548 DGKLPCLVE--DKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVP 605
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+V + ++R + + CGS +T AI H
Sbjct: 606 TIV---EALKDRHVKY-IACGSNYTAAICLH 632
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V QIA G H+A VT I TWG G+LG G D HP++V
Sbjct: 286 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLV 332
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2952 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALT-----VD 3005
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3006 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3063
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3064 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3120
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3121 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3178
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3179 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3238
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3239 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3265
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3987 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRG--VEVVDVAAG 4039
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4040 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4099
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4100 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4154
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4155 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4176
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4177 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4225
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4226 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4257
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 411 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 465
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G + +L HG +
Sbjct: 466 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEIL 525
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ +S + +CG+R + L G QV+ +G G G+LG + P++
Sbjct: 526 IMISGLDRQKFIYKSCGIRFAQTLAFYENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 582
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 583 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 642
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 643 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 697
Query: 342 AAGAEHS 348
A G S
Sbjct: 698 ACGPAQS 704
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTA-----AGDLY 4053
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4054 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4113
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4114 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4170
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4171 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4214
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 446 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 500
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ +L HG ++ D ++ + + ++G +++
Sbjct: 501 GELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSW 560
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 561 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 617
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 618 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3949
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S SSP + S + + ++A G +H L L + +VY +G
Sbjct: 3950 GYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4006
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L +E+V ++A G SA ++A G LYTWG+G
Sbjct: 4007 EDGKLGHGSR--SPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4064
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4065 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4124
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4125 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4179
Query: 379 PKVVN 383
P+ V
Sbjct: 4180 PRQVQ 4184
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3894 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3949
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3950 GYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4009
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L GV+V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4010 KLGHGSRSPCDRP-----RVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4064
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4065 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4093
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2897 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2954
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2955 ACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3015 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3069
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3070 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3100
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRGQL 213
+G +G Y + P++ N V QIAC + L+L ++ C+ Q Y
Sbjct: 359 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN--------- 409
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNS 265
PQ+ GL IV I+A+ D AL+A G +Y+WG G
Sbjct: 410 -------SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD 462
Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T + P+ + S+ S QA A G + +T +GE+ G ++ L D R +
Sbjct: 463 TVPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRL-DHGRSA 520
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT--ENRAIMTWGWGEHGQLGLGNTCDQ 376
++ L +S LD K I + G + + EN + +WG G++G+LG G +
Sbjct: 521 ----MNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGC 576
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 577 KTPKLI---EKLQDLDV-VKVRCGSQFSIALTK 605
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VWSWG G G+LG G +P+L+ V + CG +ALT G+V+
Sbjct: 556 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTK-----DGQVY 610
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG+G + +LGHG YPK + G + + ++AG H CL D
Sbjct: 611 SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK--VIDVAAGSTH--------CLALTEDSE 660
Query: 155 FGQLGHGDYRSH--------SSPVKVSSFVNKNVHQIACGMRHSL 191
G D H P + K++ IACG S
Sbjct: 661 VHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 705
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACG 186
+T I+ +S +GC++T Y S + +P V ++N+ +IA
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQA-----------YNSDTLAPQLVQGLASRNIVKIAAH 432
Query: 187 M--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE----IVGI 240
H L L +VY +G G G+LG D + + P+V + +V I
Sbjct: 433 SDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEEPKVISAFSGKQAGKHVVHI 487
Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSD-----VNCPQSLPSSLS-----FSQAALGWNH 290
+ SAA++AEG LYTWGRG D +N + S L + + +
Sbjct: 488 ACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQ 547
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L +G+V G +G L P +EK+ +LD V+++ G++ S
Sbjct: 548 TLAFYENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIA 602
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+T++ + +WG G++ +LG G +PK++
Sbjct: 603 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 635
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4209 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSAGKL 4267
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 25/297 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D +P ++ L +V +A G +H+LAL + G V++
Sbjct: 111 VWTWGWNEYGQLGDGTTMDHNTPGMV--GGLGNVRAVAVGISHMLALGND-----GTVWA 163
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ + GQLG G VD++ P V+ I ISAG+NH+ + D+G ++T G
Sbjct: 164 WGKNNCGQLGDGTNVDSMTPVRVSGLP----RIVAISAGYNHNLAIDDAGNVWTWGLNDC 219
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S +P KV NV +A G SL L D ++ +GS +G+LGV
Sbjct: 220 GQLGDGTNISSPNPKKVKGLA--NVTAVAGGSSFSLALKDD---GTIWAWGSNVQGELGV 274
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW-----GRGFNSTSDVN 270
+ LP GL + ++ I+A G+ SAA++ +G L+ W G+ + D +
Sbjct: 275 GT--TKDCPLPVKVQGLTN--VIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDAS 330
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P+ + +G +++ L DG + ++G + G L P VA+
Sbjct: 331 SPRRASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAI 387
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 132/292 (45%), Gaps = 45/292 (15%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++WG G LG+ + D PK V Y +T + + + + D G ++T
Sbjct: 60 GTVWTWGHSWHGGLGYESVQDQYVPKRVPI-----YNVTSVDSCFASVAALKDDGTVWTW 114
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLG G H++P V NV +A G+ H L L D V+ +G
Sbjct: 115 GWNEYGQLGDGTTMDHNTPGMVGGL--GNVRAVAVGISHMLALGND---GTVWAWGKNNC 169
Query: 211 GQLGV-----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
GQLG S +R LP+ IV ISA + + A+ G+++TWG
Sbjct: 170 GQLGDGTNVDSMTPVRVSGLPR---------IVAISAGYNHNLAIDDAGNVWTWGLNDCG 220
Query: 261 ---RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G N +S P+ + + + A G + L L DG + G + G L V
Sbjct: 221 QLGDGTNISSP--NPKKVKGLANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELG----V 274
Query: 318 SSTR--PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+T+ PL V ++ ++N VI+IAAG E SA +T + ++ WG E G+
Sbjct: 275 GTTKDCPLPVKVQGLTN-----VIRIAAGGETSAAITNDGSLWVWGHNEQGK 321
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
AAL +G ++TWG G +T D N P + + A+G +H+L L DG V
Sbjct: 103 AALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGLGNVRAVAVGISHMLALGNDGTVW 162
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G ++ G L D V S P+ +VS L +++ I+AG H+ + + + TWG
Sbjct: 163 AWGKNNCGQLGDGTNVDSMTPV-----RVSGLP--RIVAISAGYNHNLAIDDAGNVWTWG 215
Query: 362 WGEHGQLGLGNTCDQIHPKVV 382
+ GQLG G +PK V
Sbjct: 216 LNDCGQLGDGTNISSPNPKKV 236
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI-ACGMRHSLVLLKDCLGNQ 201
D+G ++T G G LG+ + P +V + NV + +C S+ LKD
Sbjct: 58 DNGTVWTWGHSWHGGLGYESVQDQYVPKRVPIY---NVTSVDSC--FASVAALKD--DGT 110
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V+ +G + GQLG + P + GL ++ V + + AL +G ++ WG+
Sbjct: 111 VWTWGWNEYGQLG--DGTTMDHNTPGMVGGLGNVRAVAVGIS--HMLALGNDGTVWAWGK 166
Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
G + D P + + G+NH L + G V G + G L D
Sbjct: 167 NNCGQLGDGTNVDSMTPVRVSGLPRIVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGT 226
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+SS P +KV L V +A G+ S + ++ I WG G+LG+G T D
Sbjct: 227 NISSPNP-----KKVKGL--ANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKD 279
Query: 376 QIHP 379
P
Sbjct: 280 CPLP 283
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
V C S PS + ++ G + L +G V G S HG L P V +
Sbjct: 34 VRCAASQPSVVDVAE---GHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRVPIY 90
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V+++D A + ++ + TWGW E+GQLG G T D P +V
Sbjct: 91 NVTSVDSC--------FASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMV 136
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2990 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3043
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3044 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3101
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3102 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3158
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3159 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3216
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3217 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3276
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3277 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3303
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + + + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 458 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 512
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 513 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 572
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 629
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 630 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 689
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 690 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 744
Query: 342 AAGAEHS 348
A G S
Sbjct: 745 ACGPAQS 751
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4027 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4079
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4080 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4139
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4140 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4194
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4195 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4216
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4217 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4265
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4266 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4297
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4093
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4094 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4153
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4154 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4210
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4211 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4254
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 493 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 547
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 548 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 607
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 608 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 664
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 665 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3989
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3990 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4046
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4047 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4104
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4105 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4164
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4165 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4219
Query: 379 PKVVN 383
P+ V
Sbjct: 4220 PRQVQ 4224
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 406 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 454
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL I+ I+A+ D AL+A G +Y+WG G T
Sbjct: 455 YNSDTL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 510
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 511 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 569
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 570 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 624
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 625 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 652
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3934 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3989
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3990 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4049
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4050 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4104
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4105 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4133
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2935 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2992
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2993 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3052
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3053 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3107
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3108 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3138
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 461 APQLVQGLASRNIIKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 515
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 516 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 575
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 576 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 633
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 634 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 682
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4249 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4307
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3011 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3064
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3065 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3122
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3123 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3179
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3180 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3237
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3238 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3297
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3298 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3324
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P + LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ + V +A GGAH +T+ G ++
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA-----AGDLY 4114
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4115 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4174
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4175 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4231
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ S +G +YTWG
Sbjct: 4232 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4275
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4048 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAG 4100
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4101 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4160
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4161 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4215
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4216 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4237
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H +E+ + TWG + GQLG G
Sbjct: 4238 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT 4286
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4287 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4318
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3955 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG----GEQTLFAVTADGKLYAT 4010
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4011 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4070
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G +V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4071 KLGHGNRSPCDRP-----RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4125
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4126 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4154
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRP--VQLIGGEQTLFAVTADGKLYAT 4010
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4011 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4067
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L E+V ++A G SA ++A G LYTWG+G
Sbjct: 4068 EDGKLGHGNR--SPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4125
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4126 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4185
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4186 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4240
Query: 379 PKVVN 383
P+ V
Sbjct: 4241 PRQVQ 4245
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2956 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3013
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3014 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3073
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3074 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3128
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3129 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3159
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4270 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4328
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P + LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ + V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ S +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4276
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4217 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4238
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H +E+ + TWG + GQLG G
Sbjct: 4239 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT 4287
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4288 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4319
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG----GEQTLFAVTADGKLYAT 4011
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4012 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G +V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4072 KLGHGNRSPCDRP-----RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4127 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4155
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRP--VQLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L E+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGNR--SPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 379 PKVVN 383
P+ V
Sbjct: 4242 PRQVQ 4246
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 2764 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 2817
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GK+FSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2818 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 2875
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2876 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2932
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2933 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2990
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2991 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3050
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3051 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3077
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLY 3867
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 3868 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 3927
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3928 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3984
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3985 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 126/284 (44%), Gaps = 27/284 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 3801 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 3853
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L+T G G +G+LGHGD P V + V IACG +L
Sbjct: 3854 GAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 3913
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3914 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3968
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + A G H + T DGEV G
Sbjct: 3969 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VA L G K+ ++A G+ H+
Sbjct: 4029 DNDEGQLGDGTTNAIQRPRLVA-----ALQGKKINRVACGSAHT 4067
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L I+++G G+++ A++A+G LY
Sbjct: 3708 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIG----GEQTLFAVTADGKLYAT 3763
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3764 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3823
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ IAAG HSA +T + TWG G +G+LG
Sbjct: 3824 KLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG 3878
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 3879 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 3907
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 26/306 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRP--IQLIGGEQTLFAVTADGKLYAT 3763
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3764 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3820
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
+ G+LG RS P+V L IE+V I+A G SA ++A G LYTWG+
Sbjct: 3821 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 3877
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + D P+ + + + + G L LT D V G +G L
Sbjct: 3878 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3937
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3938 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 3992
Query: 378 HPKVVN 383
P+ V
Sbjct: 3993 RPRQVQ 3998
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 142/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 2706 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2765
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 2766 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 2825
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 2826 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 2882
Query: 213 LGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG D + V + L H + V + ++ AL+ EG +++WG G
Sbjct: 2883 LG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 2941
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 2942 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3000
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3001 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 3057 -GLEGQK---ITRVACGSSHSVA 3075
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VWSWG G G+LG G +P+L+ V + CG +ALT G+V+
Sbjct: 410 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK-----DGQVY 464
Query: 95 SWGRGSSGQLGHGEMVDALYPK 116
SWG+G + +LGHG YPK
Sbjct: 465 SWGKGDNQRLGHGTEEHVRYPK 486
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD------------------ 196
+G +G Y + P++ N + QIAC + L+L ++
Sbjct: 343 WGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA 402
Query: 197 ---CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ QV+ +G G G+LG + P++ L D+++V + S AL+ +
Sbjct: 403 VFSLIFGQVWSWGDGDYGKLG--RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460
Query: 254 GHLYTWGRGFN 264
G +Y+WG+G N
Sbjct: 461 GQVYSWGKGDN 471
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G +++ GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYS 465
Query: 205 FGSGKRGQLG 214
+G G +LG
Sbjct: 466 WGKGDNQRLG 475
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 59 QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
+ L LS V M A ++ + + S+I G+V+SWG G G+LG G PK +
Sbjct: 377 RFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLI 436
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
+ + G S ++ G +++ G G +LGHG
Sbjct: 437 EKL--QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 477
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4023 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4081
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + + + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4102
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4162
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4218 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4239
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4240 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4288
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4289 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4320
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4116
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4012
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4070 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4128 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4188 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4242
Query: 379 PKVVN 383
P+ V
Sbjct: 4243 PRQVQ 4247
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL I+ I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4012
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4073 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4128 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4156
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIIKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P + LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ + V +A GGAH +T+ G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA-----AGDLY 4116
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ S +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDVAAG 4102
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4162
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4218 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4239
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H +E+ + TWG + GQLG G
Sbjct: 4240 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGT 4288
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4289 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4320
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG----GEQTLFAVTADGKLYAT 4012
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4013 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G +V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4073 KLGHGNRSPCDRP-----RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4128 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4156
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRP--VQLIGGEQTLFAVTADGKLYAT 4012
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4013 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L E+V ++A G SA ++A G LYTWG+G
Sbjct: 4070 EDGKLGHGNR--SPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4128 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4188 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4242
Query: 379 PKVVN 383
P+ V
Sbjct: 4243 PRQVQ 4247
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 12/182 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG DGQLG GR+ S P+++ NLS + V + A G AH +AL+ + G
Sbjct: 172 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 225
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWGR GQLG G + P + D + + ++ G +H+ ++ SG +FT GD
Sbjct: 226 VYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQK--VEFLACGGSHTALLTKSGLVFTFGD 283
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH ++ P V+ V V QIACG +H+L + D +V+ FGSGK GQ
Sbjct: 284 GKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDM--GKVFSFGSGKEGQ 341
Query: 213 LG 214
LG
Sbjct: 342 LG 343
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV + S S P++ L + +
Sbjct: 152 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 207
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
V ISA S ALS G++Y+WGR G T + + P + + A G +
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGS 267
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS- 348
H +LT G V G +G L + RP VA L G +V QIA G +H+
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLVA-----GLVGNRVTQIACGRQHTL 322
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G TC+Q+ P+ + L
Sbjct: 323 AYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKL 358
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++G G GQLG +EL P L+ + V+ +ACG H LA S GKVFS
Sbjct: 278 VFTFGDGKYGQLGHNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDM----GKVFS 333
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G GQLG+G + L P+P+
Sbjct: 334 FGSGKEGQLGNGGTCNQLMPRPM 356
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 37/238 (15%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+H + G H LVL D GK + S + R + L + I+
Sbjct: 113 KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 155
Query: 239 GISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGW 288
I+ S ALS G L+ WG R F STS ++L S + Q + G
Sbjct: 156 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 214
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H + L+ G V G + G L + P + LD KV +A G H+
Sbjct: 215 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCI-----EALDDQKVEFLACGGSHT 269
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
A++T++ + T+G G++GQLG +T +++ P +V NR TQ+ CG T A
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPCLV--AGLVGNRVTQIA--CGRQHTLA 323
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
Q G H L L+ GE+ G + G L +ST E V NL GV ++QI+
Sbjct: 156 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTS----TPEIVENLSGVPLVQIS 211
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF-CGS 401
AG HS ++ + + +WG + GQLGLG+T ++ P + D D ++E CG
Sbjct: 212 AGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALD-----DQKVEFLACGG 266
Query: 402 GFTYAISR 409
T +++
Sbjct: 267 SHTALLTK 274
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 158/331 (47%), Gaps = 30/331 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +S+LS+ V +A GG H +ALT +
Sbjct: 1821 KVYACGEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALT-----VD 1874
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 1932
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGK 209
G G +G+LGHGD + P V + V Q+ACG R + L L D V+ +G G
Sbjct: 1933 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD--EGMVFSWGDGD 1990
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNS 265
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 1991 FGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Query: 266 TSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+DV+ PQ + A+G H L +T G+V G + HG + + +
Sbjct: 2049 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK 2108
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P V L+G K+ ++A G+ HS T
Sbjct: 2109 P-----TLVQGLEGQKITRVACGSSHSVAWT 2134
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+++SWG G+LGHG P+ + G + I+AG
Sbjct: 2858 GGKHCLALSSE-----GELYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 2910
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG L+T G G +G+LGHGD P V + V +ACG +L
Sbjct: 2911 GAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLC 2970
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 2971 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3025
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3026 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3047
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3048 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3096
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 3097 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 3128
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG DG+LG G P+++ V +A GGAH +T+ G+++
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELY 2924
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V GHR +G + ++D +++ GDG
Sbjct: 2925 TWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 2984
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 2985 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3041
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3042 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3085
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 2765 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 2820
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GE+ G + G
Sbjct: 2821 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDG 2880
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L GV+V+ IAAG HSA +T + + TWG G +G+LG
Sbjct: 2881 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG 2935
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V E ++V CGSG
Sbjct: 2936 HGDSEDQLKPKLV----EALQGHRVIDVACGSG 2964
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++AEG +Y
Sbjct: 1766 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 1823
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ + P+ + S+ + A+ G H + LT DG+V G
Sbjct: 1824 ACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1883
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + +WG GE+G
Sbjct: 1884 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYG 1938
Query: 367 QLGLGNTCDQIHPKVVNL 384
+LG G+ Q+ PK+V +
Sbjct: 1939 RLGHGDNTTQLRPKLVKV 1956
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 3080 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 3138
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 149/328 (45%), Gaps = 26/328 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V +WG G GQLG G M D + + H + + AG +S + + G LFT G
Sbjct: 7 VLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFTWGW 66
Query: 153 GTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G LGH + ++ S+P +V + N + Q A G H L + Q Y +G + G
Sbjct: 67 NQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ---GQAYAWGGNEYG 123
Query: 212 QLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
Q G +R R +++PQ + + ++A G S L+ GH++TWG+ +
Sbjct: 124 QCGEEPERKEDGSKVLRRDIAIPQRCA--PQLRVRQVAAGGTHSVVLTHNGHVWTWGQPW 181
Query: 264 --NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++ P + + A+G H L L +GEV G + +G L + ++
Sbjct: 182 PPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQPRSQ 241
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V L G+ + IAAG HS +T + + WG GEHG+LG G D K+
Sbjct: 242 PVP-----VQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFG---DDKSSKM 293
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V +T +V CG T++++R
Sbjct: 294 VPQKVHLLAGETIAQVSCGG--THSVAR 319
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 155/373 (41%), Gaps = 49/373 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS-----VIG 90
V +WG+G DGQLG G + D+ + S+ LA G V+++ + S
Sbjct: 7 VLAWGSGEDGQLGVGNMEDK--------DWVCSIQALASHGKRVVSVVAGSRNSLAICED 58
Query: 91 GKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G++F+WG G LGH E P V + + I GW H V D G +
Sbjct: 59 GQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAI-GGW-HCLAVDDQGQAYA 116
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFV--------NKNVHQIACGMRHSLVLLKDCLGNQ 201
G +GQ G R + + V Q+A G HS+VL +
Sbjct: 117 WGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHN---GH 173
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V+ +G Q D I+ +S P GL +++++ + A + AL EG ++ WG
Sbjct: 174 VWTWG-----QPWPPGD-IKQISTPVRVQGLENVQLIAVGAF--HNLALLEEGEVWAWGN 225
Query: 262 ---GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G T D P+S P S L + A G H LT D EV G HG L
Sbjct: 226 NEYGQLGTGDTQ-PRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLG 284
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ SS + +KV L G + Q++ G HS T + I ++G +HG+LG G
Sbjct: 285 FGDDKSS----KMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYGR 340
Query: 373 TCDQIHPKVVNLG 385
HP V +G
Sbjct: 341 KVTTGHPMEVPIG 353
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VW+WG GQLGTG P + S ++ +A GG H ALT+ + +V+
Sbjct: 219 EVWAWGNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDA-----EVY 273
Query: 95 SWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WGRG G+LG G + + P+ V G TI +S G HS + G +F+ G
Sbjct: 274 AWGRGEHGRLGFGDDKSSKMVPQKVHLLAGE--TIAQVSCGGTHSVARTADGRIFSYGRA 331
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN--KN---------VHQIACGMRHSLV 192
G+LG+G + P++V + KN V +ACG RH+L
Sbjct: 332 DHGRLGYGRKVTTGHPMEVPIGIRPPKNAAENSGCWFVKLVACGGRHTLA 381
>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
Length = 1077
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 172/424 (40%), Gaps = 125/424 (29%)
Query: 50 GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
G L D L P+LL + + V ++ GG H +T G++FSWG+G G+LGH
Sbjct: 303 GMLVDALLPKLLESTMMLDVQSISLGGKHAALITK-----HGEIFSWGQGKCGRLGHKIN 357
Query: 110 VDALYPKPVTFFD--------------------GHRYT---------------------- 127
+D +PK V + G YT
Sbjct: 358 MDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLP 417
Query: 128 -----------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
I++++ G H+ VS G LFT GDGTFG LGHG+ S S P +V S
Sbjct: 418 QKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN 477
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
V +ACG H T + DI
Sbjct: 478 GLCVKSVACGSWH---------------------------------------TAAIVDIM 498
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQSLPSSLS------FSQAALGW 288
I DR SA G L+TWG G N + LP+ ++ F+Q + G
Sbjct: 499 I-------DRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGR 551
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ LT G V +G S HG L + S+R SVA+ + L V I++G+ H
Sbjct: 552 MLTVGLTNMGRVYTMGSSIHGQLGN----LSSRDASVAIVE-GKLKEEFVKAISSGSYHV 606
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLE-VFCGSGFTYA 406
A +T + TWG G HGQLGLG++ D+ P V LGD+ Q+E + CGS FT A
Sbjct: 607 ASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDK------QVESIACGSNFTAA 660
Query: 407 ISRH 410
I H
Sbjct: 661 ICLH 664
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 151/352 (42%), Gaps = 29/352 (8%)
Query: 39 WGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG DGQLG G + P+ ++ S + + CGG H + L G V++ G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMH-----DGSVYTCG 58
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLGH + + P+ V D + IT +S G HS V++ G LF G G GQ
Sbjct: 59 SNSCGQLGHDKA--GISPEVVGALDTQK--ITMVSCGRGHSMAVNEQGQLFAWGAGDGGQ 114
Query: 158 LGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LG G + P V + + Q+ CG +H + L +D Q++ +G GQLG+
Sbjct: 115 LGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRD---GQLFTWGQNTSGQLGLG 171
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD-- 268
K S P L I + I+A GD S ALS G ++ WG+ G N D
Sbjct: 172 KGE-PSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRA 230
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
V C S + G H LT DG + G G L S P
Sbjct: 231 VPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLP-----R 285
Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L G +V QIA G H+ A V + + +G HGQLG G D P
Sbjct: 286 RVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSP 337
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 27/302 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG GQLG G + ++ P+ F G + + G HS F+ G ++TCG
Sbjct: 1 MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGR--GLKEVGCGGQHSVFLMHDGSVYTCG 58
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLGH ++ SP V + + + ++CG HS+ + + Q++ +G+G G
Sbjct: 59 SNSCGQLGHD--KAGISPEVVGALDTQKITMVSCGRGHSMAVNEQ---GQLFAWGAGDGG 113
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ +V +P++ L D I + ALS +G L+TWG+ N++ +
Sbjct: 114 QLGLGTTET-TVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQ--NTSGQLGL 170
Query: 272 PQSLPSSL-----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS L +Q G +H L+ G V G + G L ++
Sbjct: 171 GKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRA 230
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + L KV+ I+ G EH+A +T++ + T+G G GQLG G+T ++ P+
Sbjct: 231 VPCHIKF-----LRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPR 285
Query: 381 VV 382
V
Sbjct: 286 RV 287
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T GQLG G+ +L P L + ++ + GG H AL+ + G V
Sbjct: 156 QLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALS-----LSGAV 210
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ +GQLG + D P + F + + +IS G H+ ++ G LFT GDG
Sbjct: 211 FGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQK--VVYISCGDEHTAALTKDGGLFTFGDG 268
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
++GQLGHG S P +V + V QIACG H+L + VY FG GQL
Sbjct: 269 SWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPS--SGVVYAFGCNSHGQL 326
Query: 214 G 214
G
Sbjct: 327 G 327
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 29/289 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V++ G+ + GQLG HD+ +SP+++ ++M++CG H +A+ G++
Sbjct: 54 VYTCGSNSCGQLG----HDKAGISPEVVGALDTQKITMVSCGRGHSMAVNE-----QGQL 104
Query: 94 FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG G GQLG G + P+ V HR I+ + G H +S G LFT G
Sbjct: 105 FAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHR--ISQVMCGNQHCVALSRDGQLFTWGQ 162
Query: 153 GTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLG G S P + S + QI G HS L L V+G+G + G
Sbjct: 163 NTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFAL---SLSGAVFGWGKNRAG 219
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT-----WGR-GFNS 265
QLG++ + R+V P L ++V IS + +AAL+ +G L+T WG+ G S
Sbjct: 220 QLGLNDKQDRAV--PCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGS 277
Query: 266 TSDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML 311
T+ P+ + + SQ A G +H L G V G + HG L
Sbjct: 278 TNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQL 326
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 15/229 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WGAG GQLG G + P+L+ +S + CG H +AL+ G++
Sbjct: 103 QLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR-----DGQL 157
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG+ +SGQLG G+ L+P P+ G + I+AG +HS +S SG +F G
Sbjct: 158 FTWGQNTSGQLGLGKGEPSKLFPHPLKSLAG--IPLAQITAGGDHSFALSLSGAVFGWGK 215
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG D + + P + ++ V I+CG H+ L KD ++ FG G GQ
Sbjct: 216 NRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKD---GGLFTFGDGSWGQ 272
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG 260
LG S LP+ + L E+ I+ + A + G +Y +G
Sbjct: 273 LG--HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFG 319
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G G+ GQLG G + EL P+ + + VS +ACG H LA PSS G V++
Sbjct: 262 LFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFV-PSS---GVVYA 317
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G S GQLG G + DA P PV
Sbjct: 318 FGCNSHGQLGTGILGDARSPFPV 340
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ G H + L DG V G + G L + ++ E V LD K+
Sbjct: 35 LKEVGCGGQHSVFLMHDGSVYTCGSNSCGQLGHDKA-------GISPEVVGALDTQKITM 87
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVN-LGDEFQNRDTQLEVF 398
++ G HS V E + WG G+ GQLGLG T + P++V L D +R +Q V
Sbjct: 88 VSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCD---HRISQ--VM 142
Query: 399 CGSGFTYAISR 409
CG+ A+SR
Sbjct: 143 CGNQHCVALSR 153
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ L+S + V + A G H LAL + G+VFSWG G G+LGHG+ V
Sbjct: 481 DTLGPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D R++ P ++ LD ++ I
Sbjct: 713 VDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPTALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+++ S+LS V +ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITA---- 569
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 570 -EGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKG 685
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL ++V ++A AL+ + +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + P++ N + QIAC + L+L ++ +VY + S G
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRN---GRVYMQAYNSDTLG- 484
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ GL IV I+A+ D AL+A G +++WG G
Sbjct: 485 -------------PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ + S+LS QA A G + +T +GE+ G ++G L
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 646 CKTPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 142/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3014
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 3015 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGE 3074
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3131
Query: 213 LGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG D + V + L H + V + ++ AL+ EG +++WG G
Sbjct: 3132 LG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3249
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3250 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 3306 -GLEGQK---ITRVACGSSHSVA 3324
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G P ++ + V + CG +ALT G V++
Sbjct: 4038 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 4092
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ V G + + I+ G H ++ G ++T GD
Sbjct: 4093 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGEVYTWGDNDE 4150
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V++ K ++++ACG H+L
Sbjct: 4151 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4186
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 34/198 (17%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKP---------------------------VTFFDG 123
G ++ WG GQLG E P P V G
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+R +G + ++D +++ GDG +G+LG G P+K+ S V ++
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4074
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISA 242
CG + S+ L K VY +G G +LG S D +R P+ GL +++ I+
Sbjct: 4075 ECGSQFSVALTK---SGAVYTWGKGDYHRLGHGSDDHVRR---PRQVQGLQGKKVIAIAT 4128
Query: 243 NGDRSAALSAEGHLYTWG 260
+ +G +YTWG
Sbjct: 4129 GSLHCVCCTEDGEVYTWG 4146
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V I A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-IMAHLDRLATPCMPPQCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P ++L +Q A L+L+ +G V M
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYM-----QAYN 479
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
SD ++ + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 480 SD----------TLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PK+++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT 568
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4141 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4199
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 41/362 (11%)
Query: 20 AKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG 75
A P + ++ VK +W+WG G+LG G D P+ + + S + ++ G
Sbjct: 124 AFPVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPE--QVGTDSDWTAVSAG 181
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
H +A+ + G +++WGR SG++G G+ D P+ V G +SAG
Sbjct: 182 RDHTVAVKA-----NGTLWAWGR--SGRIGLGDSGDRDEPEQV----GVDNDWIALSAGG 230
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+H+ V G L+ G GQLG GD H +P +V + + +I+ G RHSL +
Sbjct: 231 SHTVAVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDW-AKKISAGRRHSLAVKA 289
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D ++ +G + GQLG+ R P+ +G + + ISA S A+ A+G
Sbjct: 290 D---GSLWAWGDNEYGQLGLGDTDERHA--PE-QVG-SNTDWAAISAGRRHSLAVKADGS 342
Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
L++WG G T+D N P+ + + + + G H L + DG +++ G +H G
Sbjct: 343 LWSWGYNDSGQLGLGDTADRNAPEQVGADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLG 402
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L + VS P+ +A I + AG H+ V + + WG E+GQLG
Sbjct: 403 QLGLGDTVSRDAPVPIA----------SGIALVAGRNHTVAVNPDGTLRAWGDNEYGQLG 452
Query: 370 LG 371
LG
Sbjct: 453 LG 454
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 158/362 (43%), Gaps = 53/362 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G + +P+ + S + + ++ G H LA+ + G ++S
Sbjct: 293 LWAWGDNEYGQLGLGDTDERHAPE--QVGSNTDWAAISAGRRHSLAVKAD-----GSLWS 345
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SGQLG G+ D P+ V G +SAG HS V G L G
Sbjct: 346 WGYNDSGQLGLGDTADRNAPEQV----GADTDWDLVSAGGEHSLAVKADGTLMVWGLNHL 401
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD S +PV ++S + + G H++ + D + +G + GQLG+
Sbjct: 402 GQLGLGDTVSRDAPVPIASGI-----ALVAGRNHTVAVNPD---GTLRAWGDNEYGQLGL 453
Query: 216 SKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+R + P T+ G + G S N S L +G L+ WGR G T D
Sbjct: 454 GV--MRYIVTPSQTVTGSAWAAVNGGSFN--HSLGLRDDGTLWAWGRNNYGQLGLGDTDD 509
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SD------PERVSST 320
P+ + S ++ H L + DG + G + G L SD PERV S
Sbjct: 510 RATPEQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDRHTPERVGSD 569
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
+ ++ G H++ V + + WGW +GQLGLG+T D++ P+
Sbjct: 570 TDWAT---------------VSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRLSPE 614
Query: 381 VV 382
V
Sbjct: 615 QV 616
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 163/377 (43%), Gaps = 48/377 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+WSWG GQLG G D +P+ + + + +++ GG H LA+ + G +
Sbjct: 343 LWSWGYNDSGQLGLGDTADRNAPE--QVGADTDWDLVSAGGEHSLAVKAD-----GTLMV 395
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G+ V P P+ + + AG NH+ V+ G L GD +
Sbjct: 396 WGLNHLGQLGLGDTVSRDAPVPIA-------SGIALVAGRNHTVAVNPDGTLRAWGDNEY 448
Query: 156 GQLGHGDYRSHSSP---VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G R +P V S++ N HSL L D ++ +G GQ
Sbjct: 449 GQLGLGVMRYIVTPSQTVTGSAWAAVN----GGSFNHSLGLRDD---GTLWAWGRNNYGQ 501
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ R+ P+ +G H + ++A + A+ +G L+ WGR G + T
Sbjct: 502 LGLGDTDDRAT--PE-QVGSH-TDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDT 557
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+D + P+ + S ++ ++G +H + DG + G +H+G L + P V
Sbjct: 558 NDRHTPERVGSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRLSPEQVG 617
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
E + ++ G H+ V + + WGW GQLGLG+T D+ P V
Sbjct: 618 GES-------NWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQV---- 666
Query: 387 EFQNRDTQLEVFCGSGF 403
DT SG+
Sbjct: 667 ---GSDTDWAAVSASGY 680
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 40/355 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG G++G G D P+ + + + L+ GG+H +A+ + G +++
Sbjct: 194 LWAWG--RSGRIGLGDSGDRDEPEQVGVDN--DWIALSAGGSHTVAVKAD-----GTLWA 244
Query: 96 WGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR ++GQLG G+ P V T D + ISAG HS V G L+ GD
Sbjct: 245 WGRNNAGQLGLGDTNHHYTPTQVGTDTDWAK----KISAGRRHSLAVKADGSLWAWGDNE 300
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG GD +P +V S N + I+ G RHSL + D ++ +G GQLG
Sbjct: 301 YGQLGLGDTDERHAPEQVGS--NTDWAAISAGRRHSLAVKAD---GSLWSWGYNDSGQLG 355
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSD 268
+ R+ P+ D ++V SA G+ S A+ A+G L WG G T
Sbjct: 356 LGDTADRNA--PEQVGADTDWDLV--SAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVS 411
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P + S ++ G NH + + DG + G + +G L + R + +
Sbjct: 412 RDAPVPIASGIAL---VAGRNHTVAVNPDGTLRAWGDNEYGQLG----LGVMRYIVTPSQ 464
Query: 329 KVSNLDGVKVIQIAAGA-EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V+ G + G+ HS + ++ + WG +GQLGLG+T D+ P+ V
Sbjct: 465 TVT---GSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQV 516
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 33/340 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G D +P+ + S + + + H LA+ + G +++
Sbjct: 491 LWAWGRNNYGQLGLGDTDDRATPE--QVGSHTDWAAVNAASYHTLAVKND-----GTLWA 543
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR SSGQLG + D P+ V G +S G +H+ V G L+ G +
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERV----GSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHY 599
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD SP +V N ++ G+ H++ + D ++ +G RGQLG+
Sbjct: 600 GQLGLGDTSDRLSPEQVGG--ESNWLAVSTGLHHTVAVKTD---GTLWAWGWNVRGQLGL 654
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R V +G D + +SA+G R+ A+ A+G L+ WG G T +
Sbjct: 655 GHTSDRHAP---VQVG-SDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNR 710
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
N P + + ++ + G H L D + G +H G L + + P+ V E
Sbjct: 711 NTPAQVGNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDAPVQVGNE- 769
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ G H+ + + WG GQLG
Sbjct: 770 ------TDWSTVSGGGYHTLATMSDGTLRAWGLNTSGQLG 803
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 49/377 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGA--HVLALTSPSSVIGGKVF 94
+WG GQLG G + ++P Q + S+ ++V+ GG+ H L L G ++
Sbjct: 442 AWGDNEYGQLGLGVMRYIVTPSQTVTGSAWAAVN----GGSFNHSLGLRDD-----GTLW 492
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR + GQLG G+ D P+ V G ++A H+ V + G L+ G +
Sbjct: 493 AWGRNNYGQLGLGDTDDRATPEQV----GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNS 548
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG D +P +V S + + ++ G H+ + D ++ +G GQLG
Sbjct: 549 SGQLGLSDTNDRHTPERVGS--DTDWATVSVGQSHTSAVKPD---GTLWAWGWNHYGQLG 603
Query: 215 V--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ + DR+ P+ G + + +S + A+ +G L+ WG G T
Sbjct: 604 LGDTSDRLS----PEQVGG--ESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHT 657
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
SD + P + S ++ + L + DG + G +++G L + + P V
Sbjct: 658 SDRHAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVG 717
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ ++ G H+ E+ + WG GQLGLG+T ++ P V +G+
Sbjct: 718 ND-------ADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDAP--VQVGN 768
Query: 387 EFQNRDTQLEVFCGSGF 403
E T G G+
Sbjct: 769 E-----TDWSTVSGGGY 780
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 25/259 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++AG +H+ V G L+ G +G+LG GD P +V + + + ++ G H+
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGT--DSDWTAVSAGRDHT 185
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ + + ++ +G R LG S DR QV + D + + +SA G + A+
Sbjct: 186 VAVKAN---GTLWAWGRSGRIGLGDSGDRDEP---EQVGV---DNDWIALSAGGSHTVAV 236
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLML 303
A+G L+ WGR G T+ P + + +++ + G H L + DG +
Sbjct: 237 KADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRHSLAVKADGSLWAW 296
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + +G L + P V SN D I+AG HS V + ++ +WG+
Sbjct: 297 GDNEYGQLGLGDTDERHAPEQVG----SNTDWAA---ISAGRRHSLAVKADGSLWSWGYN 349
Query: 364 EHGQLGLGNTCDQIHPKVV 382
+ GQLGLG+T D+ P+ V
Sbjct: 350 DSGQLGLGDTADRNAPEQV 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
++A D + A+ A+G L+ WGR G T D + P+ + + ++ + G +H +
Sbjct: 128 LAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGTDSDWTAVSAGRDHTVA 187
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+ +G + G S G + + P V ++ I ++AG H+ V
Sbjct: 188 VKANGTLWAWGRS--GRIGLGDSGDRDEPEQVGVDN-------DWIALSAGGSHTVAVKA 238
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+ + WG GQLGLG+T P V ++ +
Sbjct: 239 DGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKK 276
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG DGQLG G + +P Q+ N + S+VS GG H LA S G +
Sbjct: 741 LWAWGRNHDGQLGLGDTDNRDAPVQVGNETDWSTVS---GGGYHTLATMSD-----GTLR 792
Query: 95 SWGRGSSGQLGHGEM 109
+WG +SGQLG M
Sbjct: 793 AWGLNTSGQLGQRTM 807
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 156/352 (44%), Gaps = 36/352 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++W+WG GQLG G + P +NL+ ++SVS G H AL + G V+
Sbjct: 419 RLWAWGDNNQGQLGNGTQQNSSLPLPVNLTGITSVS---SGHRHTAALR-----LDGTVW 470
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG GQLG G D P V G +T I+ G HS + +G ++ G
Sbjct: 471 SWGTNQYGQLGDGTRTDRSTPVQVPGLTG----VTSIATGDYHSLALRSNGTVWGWGFNR 526
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G + PV+VS N+ IA G HSL L D V+ FG GQLG
Sbjct: 527 YGQLGDGTTVDRTQPVQVSGL--TNIVSIAAGGGHSLALRSD---GTVWAFGYNFDGQLG 581
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ R ++ LP +GL + +V ++A S AL A+G ++ WG G +T
Sbjct: 582 -NGTRTWTI-LPVQAVGLGN--VVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQG 637
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVAL 327
P + + + G H L L DG V G + G L + + P L V++
Sbjct: 638 SAVPLQVSGLSAITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSM 697
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ I AG HS V + + WG HGQLG G+T + P
Sbjct: 698 SNAT--------AIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFP 741
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 162/357 (45%), Gaps = 43/357 (12%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG--GKVF 94
WSWG GQLG ++P V+ LA G A + + ++G G+++
Sbjct: 370 WSWGDNVFGQLGDTTFQPRMAP--------VQVTGLALGRADATSGQLHTVMLGANGRLW 421
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG+G ++ P PV IT +S+G H+ + G +++ G
Sbjct: 422 AWGDNNQGQLGNGTQQNSSLPLPVNLTG-----ITSVSSGHRHTAALRLDGTVWSWGTNQ 476
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G S+PV+V V IA G HSL L + V+G+G + GQLG
Sbjct: 477 YGQLGDGTRTDRSTPVQVPGLTG--VTSIATGDYHSLALRSN---GTVWGWGFNRYGQLG 531
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS------- 265
+ DR + V + +T IV I+A G S AL ++G ++ +G F+
Sbjct: 532 DGTTVDRTQPVQVSGLT------NIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTR 585
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
T + Q++ S AA G + L L DG V G + G L S PL
Sbjct: 586 TWTILPVQAVGLGNVVSLAA-GKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPL-- 642
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+VS L + I AG HS + + + WG+ GQLG G + +++ P +V
Sbjct: 643 ---QVSGLS--AITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLV 694
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 156/355 (43%), Gaps = 37/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G +P + +++L +V+ ++ G H LAL + G ++
Sbjct: 221 VWAWGDNRYGQLGDGTTVRRAAP--VRVANLDAVTHISAGAYHALALRAD-----GTAWA 273
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G V P + + + AG HS V G ++ GD +
Sbjct: 274 WGYNAFGQLGDGTTVQRTLPVLIGLTE-----TRTVVAGNYHSLAVRTDGAVWAWGDNRY 328
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G+ S + P+ + V +A G RHS+ L D + +G GQLG
Sbjct: 329 RQLGTGNLTSSAVPLHAG--MTGGVTLVA-GFRHSVALGAD---GTAWSWGDNVFGQLGD 382
Query: 216 S--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDV 269
+ + R+ V + + +G D ++ + L A G L+ WG + +
Sbjct: 383 TTFQPRMAPVQVTGLALGRADA-----TSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQ 437
Query: 270 NCPQSLPSSLS-FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
N LP +L+ + + G H L DG V G + +G L D R + P+
Sbjct: 438 NSSLPLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPV----- 492
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L GV IA G HS + N + WG+ +GQLG G T D+ P V+
Sbjct: 493 QVPGLTGVT--SIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVS 545
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 134/296 (45%), Gaps = 26/296 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG GQLG G D +P + + L+ V+ +A G H LAL S G V+
Sbjct: 469 VWSWGTNQYGQLGDGTRTDRSTP--VQVPGLTGVTSIATGDYHSLALRS-----NGTVWG 521
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G VD P V+ I I+AG HS + G ++ G
Sbjct: 522 WGFNRYGQLGDGTTVDRTQPVQVSGLT----NIVSIAAGGGHSLALRSDGTVWAFGYNFD 577
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G PV+ NV +A G +SL L D V+ +G GQLGV
Sbjct: 578 GQLGNGTRTWTILPVQAVGL--GNVVSLAAGKMYSLALRAD---GTVWAWGYNASGQLGV 632
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVN 270
+ +V L QV+ GL I I+A S AL ++G ++ WG F N TSD
Sbjct: 633 GTTQGSAVPL-QVS-GLS--AITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNR 688
Query: 271 CPQSLPSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
L S+S + A + H L + DG + G + HG L + V + P+ V
Sbjct: 689 LTPGLVVSMSNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQV 744
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 148/358 (41%), Gaps = 38/358 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G L P+ +S L+ LA G AH +AL + G V+
Sbjct: 120 DVWAWGDNASGQLGDGTLTPRAQPR--RVSGLTQGVSLASGFAHAVALRAD-----GTVW 172
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S QLG + + P PV I + AG + S + G ++ GD
Sbjct: 173 AWGDNRSNQLGSATLTRSPVPIPVPGLS----DIVAVVAGGSSSLALRADGTVWAWGDNR 228
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G ++PV+V++ V I+ G H+L L D + +G GQLG
Sbjct: 229 YGQLGDGTTVRRAAPVRVANL--DAVTHISAGAYHALALRAD---GTAWAWGYNAFGQLG 283
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNST 266
R+ LP V IGL + V A S A+ +G ++ WG G ++
Sbjct: 284 DGTTVQRT--LP-VLIGLTETRTV--VAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
S V + ++ G+ H + L DG G + G L D P+ V
Sbjct: 339 SAVPLHAGMTGGVTL---VAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVT 395
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ D +G H+ ++ N + WG GQLG G + P VNL
Sbjct: 396 GLALGRADAT------SGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNL 447
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 130/314 (41%), Gaps = 32/314 (10%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LA G H LA+ S G VF+WG GQLG G D P V + +
Sbjct: 55 LAVGQYHSLAVHSE-----GTVFAWGFNRLGQLGDGTTQDKAAPVQVAGV----ASAVSV 105
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG +S + ++G ++ GD GQLG G + P +VS +A G H++
Sbjct: 106 AAGDQYSLALDENGDVWAWGDNASGQLGDGTLTPRAQPRRVSGLTQG--VSLASGFAHAV 163
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L D V+ +G + QLG + V +P GL D IV + A G S AL
Sbjct: 164 ALRAD---GTVWAWGDNRSNQLGSATLTRSPVPIP--VPGLSD--IVAVVAGGSSSLALR 216
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+G ++ WG G +T P + + + + + G H L L DG G
Sbjct: 217 ADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWGY 276
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ G L D V T P+ + L + + AG HS V + A+ WG +
Sbjct: 277 NAFGQLGDGTTVQRTLPVLIGLTETRT--------VVAGNYHSLAVRTDGAVWAWGDNRY 328
Query: 366 GQLGLGNTCDQIHP 379
QLG GN P
Sbjct: 329 RQLGTGNLTSSAVP 342
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 22/268 (8%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G R ++ G HS V G +F G GQLG G + ++PV+V+ +
Sbjct: 47 GARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVASA--VS 104
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+A G ++SL L ++ V+ +G GQLG + + P+ GL + V +++
Sbjct: 105 VAAGDQYSLALDEN---GDVWAWGDNASGQLG--DGTLTPRAQPRRVSGL--TQGVSLAS 157
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
+ AL A+G ++ WG G + + P +P G + L L
Sbjct: 158 GFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRA 217
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG V G + +G L D V P+ +V+NLD V I+AGA H+ + +
Sbjct: 218 DGTVWAWGDNRYGQLGDGTTVRRAAPV-----RVANLD--AVTHISAGAYHALALRADGT 270
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
WG+ GQLG G T + P ++ L
Sbjct: 271 AWAWGYNAFGQLGDGTTVQRTLPVLIGL 298
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 171/444 (38%), Gaps = 123/444 (27%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG GQLG G D+ +P + ++ ++S +A G + LAL G V++
Sbjct: 71 VFAWGFNRLGQLGDGTTQDKAAP--VQVAGVASAVSVAAGDQYSLALDE-----NGDVWA 123
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFF------------------DGHRYT---------- 127
WG +SGQLG G + P+ V+ DG +
Sbjct: 124 WGDNASGQLGDGTLTPRAQPRRVSGLTQGVSLASGFAHAVALRADGTVWAWGDNRSNQLG 183
Query: 128 ------------------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
I + AG + S + G ++ GD +GQLG G ++P
Sbjct: 184 SATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAP 243
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V+V++ V I+ G H+L L D + +G GQLG R +LP V
Sbjct: 244 VRVANL--DAVTHISAGAYHALALRAD---GTAWAWGYNAFGQLGDGTTVQR--TLP-VL 295
Query: 230 IGLHDIEIV--------------GISANGDR----------------------------- 246
IGL + V + A GD
Sbjct: 296 IGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVA 355
Query: 247 ----SAALSAEGHLYTWGRG-FNSTSDVNC-PQSLPS-----SLSFSQAALGWNHVLVLT 295
S AL A+G ++WG F D P+ P +L + A G H ++L
Sbjct: 356 GFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALGRADATSGQLHTVMLG 415
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+G + G ++ G L + + +S+ PL V NL G+ +++G H+A + +
Sbjct: 416 ANGRLWAWGDNNQGQLGNGTQQNSSLPLPV------NLTGIT--SVSSGHRHTAALRLDG 467
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHP 379
+ +WG ++GQLG G D+ P
Sbjct: 468 TVWSWGTNQYGQLGDGTRTDRSTP 491
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 172/390 (44%), Gaps = 57/390 (14%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
K+++WG + G LG G + +P ++ V ++ ACG H +ALT+
Sbjct: 814 KLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTT------N 867
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+SWG GQLG G A YP V I +SAG HS +S SG L+T G
Sbjct: 868 GVYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNE--LIVSVSAGQYHSLAISASGQLWTWG 925
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG P + S N+N+ G HS++L + +V+ FGSG G
Sbjct: 926 WGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSN---GKVFTFGSGSFG 982
Query: 212 QLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
QLG S +I S P GL + I I + ALS G LYTWG
Sbjct: 983 QLGNGSTTKITS---PVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWG---------- 1028
Query: 271 CPQSLPSSLSF-SQAALGWNHVLVLT-----GDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
S P L F +Q+ + LVL D E+ L G+L LS
Sbjct: 1029 ---SSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTAD-DGLLH----------LS 1074
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
L S++ G + Q+ G HSAV++ + TWG GQLG+ +++ P V +
Sbjct: 1075 PTLVDTSHISG-DIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLV 1133
Query: 385 GDEFQNRDTQ-------LEVFCGSGFTYAI 407
G D+ EV CG+ FT A+
Sbjct: 1134 GPPSVIVDSSSTSGSLIKEVRCGADFTLAL 1163
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 180/398 (45%), Gaps = 73/398 (18%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG+ +GQL + + L P+ L++ +L ++ + CG H + LT I G+
Sbjct: 8 ELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLT-----IDGE 62
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+S G QLGHG+ L K V Y I ++ G H+ ++ +G LFT G
Sbjct: 63 VYSCGCNEFQQLGHGQSGGQL-AKVVAL---EHYRIISVACGAYHNAAITYNGLLFTWGC 118
Query: 153 GTFGQLGH-GDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ GQLG GD + VK V + + V Q++ G+ H+LVL +V+ FGS +
Sbjct: 119 NSNGQLGREGD----DTGVKLVRALSDHKVVQVSLGVEHTLVLTDTA---RVFAFGSNLK 171
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---------- 260
GQLG+ +SVS+PQ + L + + I A G S L+ G LY WG
Sbjct: 172 GQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAWGSNNYGQLGLS 231
Query: 261 --------------------------------RGFN----STSDVNCPQSLPS--SLSFS 282
R F+ S S+V+ P + +
Sbjct: 232 YFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVV 291
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
A G H + LT DG V G +G L E ST +SV K++ G V QIA
Sbjct: 292 YLACGETHTVALTRDGGVFTFGAGRYGQLGHNE---STIGISVP-RKITEFMGNVVTQIA 347
Query: 343 AGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
G H+ A+V + + +G G + QLG+G+T +++ P
Sbjct: 348 CGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLP 385
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 50/234 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE---LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+V+++G+ GQLG G ++ + Q+L LS L V + GG H LT + G
Sbjct: 162 RVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLP-VRRIVAGGWHSFVLT-----VSG 215
Query: 92 KVFSWGRGSSGQLG-----------HGEM-----------VDALYPK-----PV------ 118
+++WG + GQLG E+ VD K P+
Sbjct: 216 SLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSN 275
Query: 119 ----TFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR-SHSSPVKV 172
TF R + +++ G H+ ++ G +FT G G +GQLGH + S P K+
Sbjct: 276 VSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKI 335
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
+ F+ V QIACG H+L L+ +++ FG G QLG+ + R + P
Sbjct: 336 TEFMGNVVTQIACGRFHTLALVPKT--GRLFAFGQGTNAQLGMGDTKNRLLPCP 387
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYT 127
V LACG H +ALT G VF++G G GQLGH E + P+ +T F G+
Sbjct: 290 VVYLACGETHTVALTR-----DGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGN--V 342
Query: 128 ITHISAGWNHS-GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
+T I+ G H+ V +G LF G GT QLG GD ++ P V
Sbjct: 343 VTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRLLPCPV 388
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-----PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
V+++GAG GQLG H+E + P+ + + V+ +ACG H LAL +
Sbjct: 309 VFTFGAGRYGQLG----HNESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKT---- 360
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPV 118
G++F++G+G++ QLG G+ + L P PV
Sbjct: 361 GRLFAFGQGTNAQLGMGDTKNRLLPCPV 388
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3020 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3073
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3074 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3131
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3132 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3188
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3189 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3246
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3247 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3306
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3307 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3333
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4057 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4109
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + +V +ACG +L
Sbjct: 4110 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLC 4169
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4170 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4224
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4225 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4246
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4247 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4295
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4296 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4327
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4123
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GH +G + ++D +++ GDG
Sbjct: 4124 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4183
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4184 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4240
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4241 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4284
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPVLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4019
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4020 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4076
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4077 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4134
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L G L LT D V G +G L
Sbjct: 4135 HSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4194
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4195 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4249
Query: 379 PKVVN 383
P+ V
Sbjct: 4250 PRQVQ 4254
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3964 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4019
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4020 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4079
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4080 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4134
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V + Q ++V CGSG
Sbjct: 4135 HSDSEDQLKPKLV---EALQGHHV-VDVACGSG 4163
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2965 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3022
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3023 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3082
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3083 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3137
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3138 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3168
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4279 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4337
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VWSWGAG G+LG G + P ++ V + CG ++ A+T I G++F
Sbjct: 588 EVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAIT-----IAGELF 642
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGRG+ G+LGHG D L P V ++ + +G HS V+D+G LF GDG
Sbjct: 643 TWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGD 702
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FG+LG+G PV++ + V NV +I G + S+ L C G +Y +G G G+LG
Sbjct: 703 FGKLGNGSCNGSPIPVQIDTLV--NVSRIYSGSQFSVAL--SCDGT-LYTWGKGHGGRLG 757
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+V P++ L +I ++ AL++ G LY WGR
Sbjct: 758 HGNSEHSNV--PKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGR 802
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 141/340 (41%), Gaps = 67/340 (19%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+VFSWG G G+LGHG PK + G + I+ G
Sbjct: 4032 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSG--IGVIDIACG 4084
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ G + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4085 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4144
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P L + ++ + S AL+
Sbjct: 4145 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTR 4199
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G + H
Sbjct: 4200 SGSVYTWGKG----------------------------------DYHRLGHGNTDH---- 4221
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +KV+ L G K+I IA G+ H +++ + TWG + GQLG G
Sbjct: 4222 ------VRRP-----KKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGT 4270
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
P++V Q + ++V CGS T A+S + L
Sbjct: 4271 VTAIQRPRLVQ---SLQGKHI-VKVICGSAHTLALSTYQL 4306
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 168/391 (42%), Gaps = 29/391 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV WG QLG + P + LS L + + GG+ L + S GK+
Sbjct: 2893 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--AGGSKSLFIVSQD----GKL 2946
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G++G+LG G + P+ V + + + +G H+ ++ G +F+ G+G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + P + S K V IACG HS + ++Y +G G+ G+L
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3063
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFNS 265
G + + T+ H + V + ++ L+ EG +++W GRG +
Sbjct: 3064 GHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3123
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
V +S+ Q G L LT GEV G + L +P
Sbjct: 3124 GCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP--- 3180
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNL 384
+ L G KVI +A GA H VT++ + WG +HGQ G GNT P V+ L
Sbjct: 3181 --TPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGL 3238
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
F NR V CGS + A S PS+
Sbjct: 3239 DGVFVNR-----VACGSSHSVAWSLPQNPSE 3264
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+L+ S V +ACG AH +TS G V
Sbjct: 4044 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITS-----QGHVL 4098
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4099 TWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4158
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 4159 YGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4215
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ D +R P+ L +I+ I+ A S G ++TWG
Sbjct: 4216 HGNTDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVFTWG 4259
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGKV 93
VWSWG G G+LG G P + + SL+ + ++ CG +ALT G V
Sbjct: 4151 VWSWGDGDYGKLGRGGSDGCKIP--MKIESLAGLGVIKVECGSQFSVALTR-----SGSV 4203
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG+G +LGHG PK V G + I I+ G H SDSG +FT GD
Sbjct: 4204 YTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK--IISIATGSLHCVACSDSGEVFTWGDN 4261
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GQLG G + P V S K++ ++ CG H+L L
Sbjct: 4262 DEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 27/214 (12%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
++G+G RGQLG + RI+ + + L I+I G G+++ A++ +G LY
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAG----GEQTLYAVTPDGKLYAT 3994
Query: 260 G------RGFNSTSDVNCPQSLPSSLS---FSQAAL--GWNHVLVLTGDGEVLMLGGSHH 308
G G T V+ P +L SL + A+ G H L L+ DGEV G
Sbjct: 3995 GYGAGGRLGIGGTDSVSAP-TLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGED 4053
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L R S RP + + L G+ VI IA G+ HSA +T ++TWG G +G+L
Sbjct: 4054 GKLGHGNRDSYDRP-----KLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRL 4108
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4109 GHGDSEDQLQPKLVEALLGYR----AIDIACGSG 4138
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 137/303 (45%), Gaps = 26/303 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WG GQLG + P P R I+ G V+ G L+ G
Sbjct: 3939 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPI--QIAGGEQTLYAVTPDGKLYATGY 3996
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+LG G S S+P V S + + ++A G +H L L D +V+ +G G+
Sbjct: 3997 GAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSD---GEVFSWGEGED 4053
Query: 211 GQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------F 263
G+LG ++D S P++ L I ++ I+ SA ++++GH+ TWG+G
Sbjct: 4054 GKLGHGNRD---SYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGH 4110
Query: 264 NSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ D P+ + + L + + G L +T D V G +G L
Sbjct: 4111 GDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGC 4170
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P+ K+ +L G+ VI++ G++ S +T + ++ TWG G++ +LG GNT P
Sbjct: 4171 KIPM-----KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4225
Query: 380 KVV 382
K V
Sbjct: 4226 KKV 4228
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 152/369 (41%), Gaps = 45/369 (12%)
Query: 19 NAKPKIEEEEEEQQVVKVWS------WGAGTDGQLGTGRLHDEL---SPQLLNLSSLSSV 69
N K+ + + ++ WS +G ++ GT +L + S + L S V
Sbjct: 466 NYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQV 525
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
+AC ++ LT+ GG+VFS SS + PK +G
Sbjct: 526 RQVACTENNIYILTT-----GGQVFSLHSNSSENIA---------PKAFEGLEGVHVVQI 571
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H +S + +++ G G G+LGHGD S P + K V I CG +
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASY 631
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGIS-ANGD- 245
S + + +++ +G G G+L G S D++ +P L ++V ++ +GD
Sbjct: 632 SAAI---TIAGELFTWGRGTYGRLGHGNSDDKL----VPTQVQALKSYKVVDVALGSGDA 684
Query: 246 RSAALSAEGHLYTWGRG-FNSTSDVNC-----PQSLPSSLSFSQAALGWNHVLVLTGDGE 299
S ++ G L+ WG G F + +C P + + ++ S+ G + L+ DG
Sbjct: 685 HSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGT 744
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G H G L S P + V L+G K+ +A G+ H +T + +
Sbjct: 745 LYTWGKGHGGRLGHGNSEHSNVP-----KLVRALEGKKIADVAVGSAHCLALTSSGELYG 799
Query: 360 WGWGEHGQL 368
WG ++ Q+
Sbjct: 800 WGRNDYQQI 808
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 32/239 (13%)
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--- 214
H + + +P +V QIA C +H +VL N+V+ +G+G G+LG
Sbjct: 548 HSNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSS---ANEVWSWGAGDGGRLGHGD 604
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
VSK+ P + +GLH+ ++ GI SAA++ G L+TWGR G ++
Sbjct: 605 TVSKEH------PTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSD 658
Query: 268 DVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
D P + + S+ ALG H + +T +G + G G L + S P+
Sbjct: 659 DKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS--PI 716
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V ++ + N V +I +G++ S ++ + + TWG G G+LG GN+ PK+V
Sbjct: 717 PVQIDTLVN-----VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLV 770
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
HV+VL+ EV G G L + VS P + L +V I GA +S
Sbjct: 578 KHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIV-----GLHEKQVCGIYCGASYS 632
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
A +T + TWG G +G+LG GN+ D++ P V ++ D L
Sbjct: 633 AAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVAL 679
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4050 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4102
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + +V +ACG +L
Sbjct: 4103 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLC 4162
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4163 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4217
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4218 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4239
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4240 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4288
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4289 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4320
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4116
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GH +G + ++D +++ GDG
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4233
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4234 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPVLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 134/306 (43%), Gaps = 26/306 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4012
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4069
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ G+LG RS P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4070 EDGKLGHGN---RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 264 -NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+S S+ L +L G L LT D V G +G L
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4186
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 GCKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4241
Query: 378 HPKVVN 383
P+ V
Sbjct: 4242 RPRQVQ 4247
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3957 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4012
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4073 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V + Q ++V CGSG
Sbjct: 4128 HSDSEDQLKPKLV---EALQGHHV-VDVACGSG 4156
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4330
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 161/355 (45%), Gaps = 33/355 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V +WG GQLG G D P + + L++V+ +A G H +ALTS G V++
Sbjct: 79 VLTWGQNMHGQLGDGTNTDRKIP--VQVKDLNNVTAIAGGAWHSVALTSD-----GTVWT 131
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +GQLG G P V IT I++ H+ + G ++T G +
Sbjct: 132 WGSNWAGQLGDGTTKSRNKPVQVNNLK----NITAIASKGLHNLALKSDGTVWTWGRNIY 187
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G ++PV+ S + IA G HSL D ++ +G + GQLG
Sbjct: 188 GQLGDGTTTDRNTPVQTRSL--NTIISIAGGGYHSLAQKADG---TIWTWGLNQYGQLG- 241
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
I + ++P + G+ D+ + I GD S L G ++ WG G ST +
Sbjct: 242 -DGTITNRTIPVLVNGIKDVSM--IRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNR 298
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P + + G +H L+L DG V G + +G L D +S P+ +
Sbjct: 299 STPVPMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQAS--T 356
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+SN V IA+G +HS + + I WG +GQLG G+ ++ P +V +
Sbjct: 357 LSN-----VTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVKI 406
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 35/321 (10%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
S++ ++ G H +AL S G V +WG+ GQLG G D P V +
Sbjct: 58 STILQVSGGSFHSIALKSD-----GTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN---- 108
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+T I+ G HS ++ G ++T G GQLG G +S + PV+V++ KN+ IA
Sbjct: 109 NVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNL--KNITAIASK 166
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
H+L L D V+ +G GQLG + DR + P T L+ I+ I+ G
Sbjct: 167 GLHNLALKSDG---TVWTWGRNIYGQLGDGTTTDR----NTPVQTRSLN--TIISIAGGG 217
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
S A A+G ++TWG G + ++ P + S G +H +VL +G
Sbjct: 218 YHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNG 277
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ + G + HG L D R + R V + + N ++ I G +HS ++ + +
Sbjct: 278 TIWIWGFNQHGQLGD--RSTDNRSTPVPMGDLKN-----IMTIDGGGDHSLILKSDGTVW 330
Query: 359 TWGWGEHGQLGLGNTCDQIHP 379
TWG E+GQLG G T + P
Sbjct: 331 TWGNNENGQLGDGTTMSRATP 351
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 123/269 (45%), Gaps = 30/269 (11%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
TI +S G HS + G + T G GQLG G PV+V NV IA G
Sbjct: 59 TILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDL--NNVTAIAGG 116
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
HS+ L D V+ +GS GQLG +K R + V + + I I++ G
Sbjct: 117 AWHSVALTSDG---TVWTWGSNWAGQLGDGTTKSRNKPVQVNNLK------NITAIASKG 167
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
+ AL ++G ++TWGR G +T+D N P S + A G H L DG
Sbjct: 168 LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGGGYHSLAQKADG 227
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAI 357
+ G + +G L D + T P+ V +G+K V I G +HS V+ N I
Sbjct: 228 TIWTWGLNQYGQLGDGTITNRTIPVLV--------NGIKDVSMIRCGGDHSIVLKNNGTI 279
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
WG+ +HGQLG +T ++ P V +GD
Sbjct: 280 WIWGFNQHGQLGDRSTDNRSTP--VPMGD 306
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 158/327 (48%), Gaps = 30/327 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM----LACGGAHVLALTSPSSVIG 90
K+++ G T+G+LG G + PQ L+SLS + + GG H +ALT +
Sbjct: 2967 KLFACGEATNGRLGLGISAGNV-PQPRQLTSLSQYVIKKVAVHSGGRHAMALT-----VD 3020
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R + I+ G +HS + +G L+T
Sbjct: 3021 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKR--VRDIACGGSHSAAIISNGDLYTW 3078
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL-LKDCLGNQVYGFGSGK 209
G G +G+LGHGD + P V + + V Q+A G R + L L D VY +G G
Sbjct: 3079 GLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTD--SGTVYSWGDGD 3136
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
G+LG + S+P L+ + + I S AL+ G ++TWG+ G
Sbjct: 3137 FGKLG--RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGH 3194
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ + V PQ + + + A+G H L + +G+V G + HG + + +
Sbjct: 3195 GTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRK 3254
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
P AL V L+G K+ ++A G+ HS
Sbjct: 3255 P---AL--VQGLEGCKISRVACGSSHS 3276
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+ + V +A GGAH +TS G+++
Sbjct: 4043 EVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITS-----TGELY 4097
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG+G G+LGHG+ D PK V G+R T +G + ++D +++ GDG
Sbjct: 4098 SWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGD 4157
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ + V ++ CG + S+ L K VY +G G +LG
Sbjct: 4158 YGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4214
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
++D IR P+ L +IV I+ A + G +YTWG
Sbjct: 4215 HGTEDHIRR---PRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWG 4258
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 139/337 (41%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL++ G+V+SWG G G+LGHG P+ + G + I+AG
Sbjct: 4031 GGKHCLALSAE-----GEVYSWGEGEDGKLGHGNRSPCDRPRAIESLRGKE--VVDIAAG 4083
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L++ G G +G+LGHGD + P V + V +ACG +L
Sbjct: 4084 GAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLC 4143
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P L + ++ + S AL+
Sbjct: 4144 ITDD---DSVWSWGDGDYGKLG--RGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK 4198
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G + LG +
Sbjct: 4199 SGAVYTWGKG------------------------------------DYHRLGHGTEDHIR 4222
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P R ++ L G K++ IA G+ H T+ + TWG + GQLG G
Sbjct: 4223 RPRRCTT-------------LQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGT 4269
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS + A S
Sbjct: 4270 TNAIQRPRLVAALQGKKINR-----VACGSAHSLAWS 4301
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 162/373 (43%), Gaps = 75/373 (20%)
Query: 47 LGTGRLH---DELSPQLLN-LSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGR 98
L TGR++ + PQ ++ +S+L+ + ++ G+H LALTS G V+SWG
Sbjct: 450 LRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSE-----GDVYSWGN 504
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
G G+LGHG+ V P+ + H ++ +++ G +HS ++ SG LFT G G+FG+L
Sbjct: 505 GDFGKLGHGDTVTC--DSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRL 562
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G G +P VS + V +ACG + + G+ VY +G G+ G+LG +
Sbjct: 563 GLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGS-VYSWGDGEYGKLG--RG 619
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSS 278
P++ L +++ + SAA+ G ++TWG
Sbjct: 620 GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWG------------------ 661
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
+GE LG HG E V R +V L G V
Sbjct: 662 ------------------NGEGYKLG---HGT---EEHVRFPR-------QVETLAGKHV 690
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLE 396
++ G+ H TE +++WG + GQLG G+T + P LG +
Sbjct: 691 TSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCI------IG 744
Query: 397 VFCGSGFTYAISR 409
+ C S T+A SR
Sbjct: 745 ITCSSAQTFAWSR 757
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G SP L+N SV +ACG H A+T+ G++F+
Sbjct: 499 VYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITA-----SGELFT 553
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRGS G+LG G D L P V+ G +G + ++D+G +++ GDG +
Sbjct: 554 WGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY 613
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G +P V +V ++ CG ++S + C V+ +G+G+ +LG
Sbjct: 614 GKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV---CKNGAVFTWGNGEGYKLGH 670
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ V P+ L + +S A + EG L +WGR
Sbjct: 671 GTE--EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G P ++ V + CG +ALT G V++
Sbjct: 4150 VWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTK-----SGAVYT 4204
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ T G + I I+ G H +D+G ++T GD
Sbjct: 4205 WGKGDYHRLGHGTEDHIRRPRRCTTLQGKK--IVSIACGSLHCVACTDAGEVYTWGDNDE 4262
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V++ K ++++ACG HSL
Sbjct: 4263 GQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSL 4298
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G+ G+LG G D L+P L++ +V +ACG A +AL G
Sbjct: 550 ELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD-----TGS 604
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG G PK V G +T + G +S V +G +FT G+
Sbjct: 605 VYSWGDGEYGKLGRGGSEGCKAPKLVDKLQG--LDVTRVYCGPQYSAAVCKNGAVFTWGN 662
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +LGHG P +V + K+V ++ G H L ++ ++ +G +GQ
Sbjct: 663 GEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEE---GELLSWGRNDKGQ 719
Query: 213 LG 214
LG
Sbjct: 720 LG 721
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 134/316 (42%), Gaps = 41/316 (12%)
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS----AGWNHSGF-VSD 143
I +VF WG QLG + P G T++ + G + S F V+
Sbjct: 2912 IQTQVFVWGLNDKDQLGGPKGSKIKTP-------GINETLSTLKCVQIVGGSKSLFCVTQ 2964
Query: 144 SGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGN 200
G LF CG+ T G+LG G + P +++S + ++A G RH++ L D
Sbjct: 2965 DGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVD---G 3021
Query: 201 QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG S+ + P++ L + I+ G SAA+ + G LYTW
Sbjct: 3022 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTW 3078
Query: 260 GRGFNST--SDVNCPQSLPSSLS------FSQAALGWN--HVLVLTGDGEVLMLGGSHHG 309
G G N Q P + Q ALG L LT G V G G
Sbjct: 3079 GLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFG 3138
Query: 310 MLSD--PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
L E S P + L+GV V QI GA+ S +T++ + TWG G++ +
Sbjct: 3139 KLGRGGSEGCSVPHP-------IERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFR 3191
Query: 368 LGLGNTCDQIHPKVVN 383
LG G P++V
Sbjct: 3192 LGHGTDAHVRKPQLVE 3207
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 201 QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVG-----ISANGDRSAALSAEG 254
Q++G+G RGQLG V +++ + + ++++G S GD + A G
Sbjct: 3937 QIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGD--GKVCATG 3994
Query: 255 HLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGM 310
+ G T V P + S + + A+ G H L L+ +GEV G G
Sbjct: 3995 YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGK 4054
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L R RP + +L G +V+ IAAG HSA +T + +WG G +G+LG
Sbjct: 4055 LGHGNRSPCDRP-----RAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGH 4109
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ PK+V+ ++ D V CGSG
Sbjct: 4110 GDSEDQTKPKLVDALKGYRVTD----VACGSG 4137
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 41/262 (15%)
Query: 175 FVNKNVHQIACGMRHSLVLLKDC--------LGNQVYGFGSGKRGQLGVSK-DRIRSVSL 225
+ N + A G R S V+ K + QV+ +G + QLG K +I++ +
Sbjct: 2881 LASDNEEEEAEGQRASQVMAKKVKCGSGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGI 2940
Query: 226 PQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTWGRGFNS-----TSDVNCPQSLPSSL 279
+ L ++IVG G +S ++ +G L+ G N S N PQ P L
Sbjct: 2941 NETLSTLKCVQIVG----GSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQ--PRQL 2994
Query: 280 -SFSQAAL-------GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
S SQ + G H + LT DG+V G G L R++ +P +
Sbjct: 2995 TSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIE 3049
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-------L 384
L +V IA G HSA + N + TWG GE+G+LG G+ Q+ PK+V +
Sbjct: 3050 ALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVI 3109
Query: 385 GDEFQNRDTQLEVFCGSGFTYA 406
+RD Q SG Y+
Sbjct: 3110 QVALGSRDAQTLALTDSGTVYS 3131
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G P + + V + CG LALT G+V++
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTK-----SGQVWT 3183
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ V G + +TH++ G H V D+G ++ GD
Sbjct: 3184 WGKGDYFRLGHGTDAHVRKPQLVETLKGKK--VTHVAVGALHCLSVLDNGQVYAWGDNDH 3241
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G+ + P V + ++ACG HS+
Sbjct: 3242 GQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSI 3277
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G +P+L++ V+ + CG + A+ G VF+
Sbjct: 605 VYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCK-----NGAVFT 659
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G +LGHG +P+ V G +T +S G +H ++ G L + G
Sbjct: 660 WGNGEGYKLGHGTEEHVRFPRQVETLAGKH--VTSLSLGSHHCLATTEEGELLSWGRNDK 717
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
GQLG G + P +S + K + I C
Sbjct: 718 GQLGEGHTGLKAEPAFAASLLGKCIIGITC 747
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 213 LGVSKDRIRSVSLPQ--VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
L + +D SV L Q V I H + + + L+ WG + STSD
Sbjct: 362 LTIPEDESMSVDLRQSVVVILSHLDRLAEPYMPAQEAHKVCGAQELFAWG--WLSTSDAT 419
Query: 271 CPQS-----LPSSLS-FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
C + LP+ L Q A N +L+L G V + S ++P+
Sbjct: 420 CHNTPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNS-----AEPQ--------- 465
Query: 325 VALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ ++S L +++I++AA +E H +T + +WG G+ G+LG G+T P ++
Sbjct: 466 -SMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLI 524
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAIS 408
N E + + V CGS + AI+
Sbjct: 525 N---ELHGKSV-VNVACGSHHSAAIT 546
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ V GK+
Sbjct: 4253 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPVNAGKL 4311
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GK+FSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ +L+S + V + A G H LAL++ G+VFSWG G G+LGHG+ V
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++IV + S AL+ +G +YTWG+G N + V P+ L
Sbjct: 653 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D R++ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 139/337 (41%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4104
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G LFT G G +G+LGHGD P V + V IACG +L
Sbjct: 4105 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L D+ +V + S AL+
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK 4219
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4220 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4241
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4242 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4291 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4322
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G +F
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLF 4118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S + V ++ CG + S+ L K VY +G G +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+L+ S+LS V +ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKLI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 685
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4014
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ IAAG HSA +T + TWG G +G+LG
Sbjct: 4075 KLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG 4129
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4130 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 4158
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + S P++ N V QIAC + L+L ++ +VY + S G
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRN---GRVYTQAYNSDTLG- 484
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ L IV I+A+ D ALSA G +++WG G
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 531
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ L S+LS QA A G + +T +GE+ G ++G L
Sbjct: 532 DTVPLEEPK-LISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 646 CKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 675
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 142/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 2958 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 3018 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3077
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3134
Query: 213 LGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG D + V + L H + V + ++ AL+ EG +++WG G
Sbjct: 3135 LG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3252
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3253 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 3309 -GLEGQK---ITRVACGSSHSVA 3327
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4332
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 3069
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3127
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3243 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3302
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3329
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P + LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4053 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IELVDVAAG 4105
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 4106 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 4165
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4166 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4220
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4221 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4242
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4243 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4291
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4292 TNAIQRPRLVPALQGKKVNR-----VACGSAHTLAWS 4323
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
+V+SWG DG+LG G P+++ SL + ++ A GGAH +T+ G
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVIE--SLRGIELVDVAAGGAHSACVTA-----AGD 4117
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG+G G+LGH + D L PK V GHR +G + ++D +++ GD
Sbjct: 4118 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4177
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G P+K+ S V ++ CG + S+ L K VY +G G +
Sbjct: 4178 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHR 4234
Query: 213 LGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG S D +R P+ GL +++ I+ + +G +YTWG G +
Sbjct: 4235 LGHGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4291
Query: 266 TSDVNCPQSLPS 277
T+ + P+ +P+
Sbjct: 4292 TNAIQRPRLVPA 4303
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AVPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 675
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4015
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4016 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4072
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4073 EDGKLGHGNR--SPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4130
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4131 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4190
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4191 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4245
Query: 379 PKVVN 383
P+ V
Sbjct: 4246 PRQVQ 4250
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3960 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4015
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4016 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4075
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++++ +AAG HSA VT + TWG G +G+LG
Sbjct: 4076 KLGHGNRSPCDRP-----RVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4130
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 4131 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 4159
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 203 YGFGSG--KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+G G G G L + + +P + L + +V ++ A++ EG +Y G
Sbjct: 2962 FGVGQGAVSTGSLCCDGVGLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3021
Query: 261 RGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
N S+ V P+ + SS + A+ G H LT DG+V G G
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3081
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G+LG
Sbjct: 3082 KLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3136
Query: 370 LGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V LG ++V CGS
Sbjct: 3137 HGDNTTQLKPKMVKVLLGHRV------IQVACGS 3164
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4275 EVYTWGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4333
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2237 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 2290
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2291 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2348
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2349 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2405
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2406 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2463
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2464 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 2523
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 2524 KP-----TLVQGLEGQKITRVACGSSHSVAWT 2550
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 70/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3274 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3326
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 3327 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLC 3386
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3387 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3441
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3442 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3463
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3464 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGT 3511
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 3512 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 3543
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3286 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3340
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3341 TWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3400
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3401 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3457
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I A G E YTWG
Sbjct: 3458 HGSDDHVRR---PRQVQGLQGKKVIAI-ATGSLHCVCCTEDGSYTWG 3500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3181 IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIG----GEQTLFAVTADGKLYAT 3236
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3237 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3296
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3297 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3351
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V D Q ++V CGSG
Sbjct: 3352 HSDSEDQLKPKLV---DALQGHRV-VDVACGSG 3380
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV--QLIGGEQTLFAVTADGKLYAT 3236
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3237 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3293
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3294 EDGKLGHGNRS--PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3351
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 3352 HSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3411
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3412 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3466
Query: 379 PKVVN 383
P+ V
Sbjct: 3467 PRQVQ 3471
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G P ++ + V + CG +ALT G V++
Sbjct: 3393 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK-----SGAVYT 3447
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ V G + + I+ G H ++ G +T GD
Sbjct: 3448 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGS-YTWGDNDE 3504
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V++ K V+++ACG H+L
Sbjct: 3505 GQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2182 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2239
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 2240 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 2300 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 2354
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2355 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2385
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 2716 KVYACGEATNGRLGLG-MSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALT-----VD 2769
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 2770 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 2827
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2828 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2884
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2885 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2942
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2943 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 3002
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3003 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3029
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L +
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D + T+P L LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGNNDQCQHFD--TLHQTKPEPSLL---PGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G V+D+G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ L +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ + V +A GGAH +TS G ++
Sbjct: 3738 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTS-----AGDLY 3792
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3793 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3852
Query: 155 FGQLGHGDYRSHSSPVKV--SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+G+LG G P+KV S V + R + G G +
Sbjct: 3853 YGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDV-------------GGKGDYHR 3899
Query: 213 LGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG S D +R P+ GL +++ I+ + EG +YTWG
Sbjct: 3900 LGHGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWG 3945
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 121/281 (43%), Gaps = 29/281 (10%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ V G + I+AG
Sbjct: 3726 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTE--VVDIAAG 3778
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 3838
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS---AA 249
L D + V+ +G G G+LG V + +V + L VG + S
Sbjct: 3839 LTDD---DTVWSWGDGDYGKLGRGGSDGCKVPM-KVPLSLR----VGRPSTPPPSWPRLD 3890
Query: 250 LSAEGHLYTWGRGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+ +G + G G S V P+ + A G H + T +GEV G +
Sbjct: 3891 VGGKGDYHRLGHG--SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDND 3948
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G L D + RP VA L G KV ++A G+ H+
Sbjct: 3949 EGQLGDGTTNAIQRPRLVA-----ALQGRKVNRVACGSAHT 3984
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 143/369 (38%), Gaps = 62/369 (16%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3688
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3689 GYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 3745
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L E+V I+A G SA +++ G LYTWG+G
Sbjct: 3746 EDGKLG--HGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLG 3803
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGML----SDP 314
+S S+ L +L + G L LT D V G +G L SD
Sbjct: 3804 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3863
Query: 315 ERVSSTRPLSVAL-----------------------------------EKVSNLDGVKVI 339
+V PLS+ + +V L G KVI
Sbjct: 3864 CKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3923
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399
IA G+ H TE + TWG + GQLG G T P++V Q R V C
Sbjct: 3924 AIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVA---ALQGRKVN-RVAC 3979
Query: 400 GSGFTYAIS 408
GS T A S
Sbjct: 3980 GSAHTLAWS 3988
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKCYANVIGPIQSKGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ VT+N + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-VKVRCGSQFSVALTK 675
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSL 275
+ +P + L + +V ++ A++ EG +Y G N S+ V P+ +
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743
Query: 276 P--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
SS + A+ G H LT DG+V G G L R++ +P +
Sbjct: 2744 TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP-----RLIE 2798
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQ 389
L ++ IA G+ HSA +T + + TWG GE+G+LG G+ Q+ PK+V LG
Sbjct: 2799 ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV- 2857
Query: 390 NRDTQLEVFCGS 401
++V CGS
Sbjct: 2858 -----IQVACGS 2864
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWNHV--LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 3940 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWSTSKPASAGKL 3998
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 161/363 (44%), Gaps = 38/363 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG+ G+LG G + DE +P+ +N + + +ACG + +A+T G+V
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKE-----GQV 55
Query: 94 FSWGRGSSGQLGHGEMVDALY----PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
+S G GQLG + L P+ F + G +H+ V++ G LF+
Sbjct: 56 YSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKA--------ACGSSHTLVVNEWGQLFS 107
Query: 150 CGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G GQLG + P V + K + QIACG++HS+ L + ++Y +GS
Sbjct: 108 WGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNN---GELYAWGSN 164
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
GQLG+ D + P++ L + I ++ G + +S G ++ WGR G
Sbjct: 165 SDGQLGLGSDTKMELK-PKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG 223
Query: 263 FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ + N P L + + AA G + LT DG V G +G L + S
Sbjct: 224 LSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEI 283
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLGLGNTCDQIHP 379
P ++ L G V QI+ G H+ + +R + WG G GQLG + P
Sbjct: 284 LP-----RQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTP 338
Query: 380 KVV 382
+VV
Sbjct: 339 QVV 341
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 14/199 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ +DGQLG G EL P+L++ + ++ +ACGG H + ++ G V
Sbjct: 157 ELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISK-----SGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WGR + GQLG ++ + P + R + + + G S F++ G +FTCG G
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSR--VCYAACGEEFSVFLTMDGGVFTCGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG+ S P ++ + V QI+CG RH+L L+ +VY +G G GQL
Sbjct: 270 MYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPS--RGRVYAWGLGGAGQL 327
Query: 214 GVSKDRI-RSVSLPQVTIG 231
G +RI ++ + PQV G
Sbjct: 328 G---NRIAQNSTTPQVVFG 343
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 31/239 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG+ +GQLG R+ + P+++ + +ACG H +ALT+ G++
Sbjct: 104 QLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTN-----NGEL 158
Query: 94 FSWGRGSSGQLGHG---------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
++WG S GQLG G ++V +L P+ F ++ G H+ +S S
Sbjct: 159 YAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAF----------VACGGYHTIVISKS 208
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G +F G TFGQLG D ++ + P ++ + N V ACG S+ L D V+
Sbjct: 209 GAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMD---GGVFT 265
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGRG 262
G+G GQLG S LP+ + L + IS + AL + G +Y WG G
Sbjct: 266 CGAGMYGQLGHGNK--TSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLG 322
>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1349
Score = 117 bits (293), Expect = 1e-23, Method: Composition-based stats.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 57/364 (15%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q +++ WG G GQLG + P L N+ + + CG H +AL+S G
Sbjct: 981 QTGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMALSS-----SG 1035
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWG G GQLGH +M PK + +F I +IS G +HS +S+ G L+T G
Sbjct: 1036 QVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWG 1095
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ--------------IACGMRHSLVLLKDC 197
+L + ++ PV K ++Q ++ G+ H+ V+ D
Sbjct: 1096 CNYDYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSLGVNHTAVITVD- 1154
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
VY G G G+LG+ I + S+P I + DI S N + + +
Sbjct: 1155 --GSVYTAGLGNHGELGI----ILNESVPNTDI-IRDIVCQQNSNNVEERCCYLHK--VQ 1205
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T+G N D+ C G+ +VL +G V G + P+ +
Sbjct: 1206 TFGEE-NKAIDIAC---------------GYEFTIVLNAEGTVYQFGKK---ISQGPDFI 1246
Query: 318 SSTRPLSVALEKVSN---------LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + + + K S ++V QIAAG H A++TEN + TWG + +L
Sbjct: 1247 GTKQEIQDYVTKDSQNVTPQIMYEFGNIRVQQIAAGKNHIAIITENGELYTWGKNFYDKL 1306
Query: 369 GLGN 372
+G+
Sbjct: 1307 DMGD 1310
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 176/440 (40%), Gaps = 89/440 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-------------------VSMLACGG 76
+++WG G+ G LG G D +P + L S + V+ + G
Sbjct: 202 LYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGA 261
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
H +A TS G +++WG G +G+LG G +L P V + I ++AG +
Sbjct: 262 KHSMACTSD-----GTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDR--DIVFVNAGDS 314
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS + G L+T G G FG+LGHGD P KV F V Q+ACG H+L L
Sbjct: 315 HSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHK 374
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEG 254
V+ +G+G LG + S + V L DIE ++ I+A SAA++ G
Sbjct: 375 ---GTVFAWGAGL--ALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG 429
Query: 255 HLYTWGRGFNSTSDVNCPQSLP-------------------------------------- 276
L WG G +S Q+ P
Sbjct: 430 DLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDV 489
Query: 277 --------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
SS + G +H + LTG G V + G + G L E V + V LE
Sbjct: 490 PGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE 549
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
S + +IA G++H V + + WG ++GQLGLG P V +
Sbjct: 550 CFST----PIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQ- 604
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
++VFCG ++ I+
Sbjct: 605 -----AVDVFCGDDYSACIT 619
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 179/408 (43%), Gaps = 65/408 (15%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++ WG LG G + + + P L+ S ++CG + L + GGKV
Sbjct: 69 QLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKV 128
Query: 94 FSWGRGSSGQLGH---------GEMVDA-----------LYPKP--VTFFDGHRYTITHI 131
+++G G+ G+LG+ G D PKP V F D + I I
Sbjct: 129 YTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRD--KCKIARI 186
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKNVH--- 181
S G +H+ +SD G L+ G G++G LG GD +PV+V S +NV
Sbjct: 187 SCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGK 246
Query: 182 ------QIAC---GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
+ C G +HS+ D ++ +G G G+LG+ +R S+S P V +
Sbjct: 247 VRADPVVVTCCSAGAKHSMACTSD---GTLWTWGHGGNGRLGLGHNR-GSLS-PAVVDYI 301
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQA 284
D +IV ++A SA + +G LYTWG G ++ P+ + + Q
Sbjct: 302 LDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQV 361
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAA 343
A G H L LT G V G + E S VA+ K +S+++ V+ IAA
Sbjct: 362 ACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM---VAVPKHLSDIEAA-VLNIAA 417
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
G HSA VT ++ WG G +LG G+ +Q PK V + +NR
Sbjct: 418 GPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVA---DLRNR 462
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 143/358 (39%), Gaps = 68/358 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG+ DGQLG G +E + + L S+ + +ACG H LA+ G VF
Sbjct: 521 VWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQY-----GDVF 575
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVT-------FFDGHRYT--ITHISAGWNHSGFV-SDS 144
+WG +GQLG G + + P VT F G Y+ IT + + SG ++
Sbjct: 576 AWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEF 635
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G L+ G G+LG G+ + S + V +V AC + D L Q Y
Sbjct: 636 GDLWAWGAAESGKLGLGEDVASGSILTPQKVVF-SVPVCACSL--------DSLEMQAY- 685
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
R+ VS + G S A++A+G Y WG G+
Sbjct: 686 -------------KRVFCVSFSPLCSGT------------SHSLAITAQGECYAWGAGYY 720
Query: 264 -----NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+T++ P P + A G H L L+ DG++ G +
Sbjct: 721 GRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRRE-------DT 773
Query: 317 VSSTRPLSVAL-EKVSNLDGV-KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
S+T +S + ++ GV KV I+A HS VTE + WG + Q G G
Sbjct: 774 CSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGK 831
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+++ F +V ++A G+ H+LV+ Q++G+G LG+ + IR P +
Sbjct: 39 RIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVE-IRERVFPGLVP 97
Query: 231 GLHDIEIVGISANGDRSAALSAE-----GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
+ +S + SA L G +YT+G G + + P++ ++ Q
Sbjct: 98 FFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLG--NRGRLGYPKNKADGVAGYQGD 155
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+GDG+ D + +P +V D K+ +I+ GA
Sbjct: 156 F--------SGDGQ------------EDGPSWFTPKP-----SRVRFRDKCKIARISCGA 190
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+H+ +++ A+ WG G +G LG G+T D P V LG E
Sbjct: 191 DHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSE 232
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 2992 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3045
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GK+FSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3046 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3103
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3104 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3160
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3161 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3218
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3219 HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3278
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3279 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3305
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ +L+S + V + A G H LAL++ G+VFSWG G G+LGHG+ V
Sbjct: 457 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSA-----NGEVFSWGCGDGGRLGHGDTVP 511
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 512 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 571
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 628
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++IV + S AL+ +G +YTWG+G N + V P+ L
Sbjct: 629 EKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKV 688
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D R++ P ++ LD ++ I
Sbjct: 689 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALP-----GLDTKHIVGI 743
Query: 342 AAGAEHS 348
A G S
Sbjct: 744 ACGPAQS 750
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4028 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4080
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G LFT G G +G+LGHGD P V + V IACG +L
Sbjct: 4081 GAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4140
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4141 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4195
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4196 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4217
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4218 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4266
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4267 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4298
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G +F
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLF 4094
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4095 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4154
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4155 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4211
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4212 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4255
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+L+ S+LS V +ACG + A+T+
Sbjct: 492 EVFSWGCGDGGRLGHGDTVPLEEPKLI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 546
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 547 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 604
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 605 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYTWGKG 661
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 662 DNQRLGHGTE--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 711
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3935 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3990
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3991 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4050
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ IAAG HSA +T + TWG G +G+LG
Sbjct: 4051 KLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG 4105
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4106 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 4134
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 142/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 2934 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2993
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ +T + + +G H+ ++ G +F+ G+
Sbjct: 2994 YACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGE 3053
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + K + IACG HS + ++Y +G G+ G+
Sbjct: 3054 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGR 3110
Query: 213 LGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG D + V + L H + V + ++ AL+ EG +++WG G
Sbjct: 3111 LG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3169
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 3170 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP- 3228
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3229 ----QVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3284
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 3285 -GLEGQK---ITRVACGSSHSVA 3303
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + S P++ + V QIAC + L+L ++ +VY + S G
Sbjct: 405 WGLIGWKYYANVSGPIQCEGLASLGVVQIACAEKRFLILSRN---GRVYTQAYNSDTLG- 460
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ L IV I+A+ D ALSA G +++WG G
Sbjct: 461 -------------PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG 507
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ L S+LS QA A G + +T +GE+ G ++G L
Sbjct: 508 DTVPLEEPK-LISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 566
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 567 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 621
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 622 CKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 651
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3990
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3991 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4047
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
+ G+LG P+V L IE+V I+A G SA ++A G L+TWG+ G
Sbjct: 4048 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG 4105
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ D P+ + + + + G L LT D V G +G L
Sbjct: 4106 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4165
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4166 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4220
Query: 379 PKVVN 383
P+ V
Sbjct: 4221 PRQVQ 4225
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 28/232 (12%)
Query: 169 PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRS 222
P V S ++N+ +IA H L L + +V+ +G G G+LG V + +
Sbjct: 461 PQLVQSLASRNIVKIAAHSDGHHYLALSAN---GEVFSWGCGDGGRLGHGDTVPLEEPKL 517
Query: 223 VS-LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
+S L G H +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 518 ISALSGKQAGKH---VVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLV 574
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L + G L +T +G+V G +G L P +EK+
Sbjct: 575 TGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 632
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD ++++ G++ S +T++ + TWG G++ +LG G +PK++
Sbjct: 633 DLD---IVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 681
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4250 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4308
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 176/440 (40%), Gaps = 89/440 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-------------------VSMLACGG 76
+++WG G+ G LG G D +P + L S + V+ + G
Sbjct: 202 LYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGA 261
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
H +A TS G +++WG G +G+LG G +L P V + I ++AG +
Sbjct: 262 KHSMACTSD-----GTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDR--DIVFVNAGDS 314
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS + G L+T G G FG+LGHGD P KV F V Q+ACG H+L L
Sbjct: 315 HSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHK 374
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEG 254
V+ +G+G LG + S + V L DIE ++ I+A SAA++ G
Sbjct: 375 ---GTVFAWGAGL--ALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG 429
Query: 255 HLYTWGRGFNSTSDVNCPQSLP-------------------------------------- 276
L WG G +S Q+ P
Sbjct: 430 DLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDV 489
Query: 277 --------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
SS + G +H + LTG G V + G + G L E V + V LE
Sbjct: 490 PGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE 549
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
S + +IA G++H V + + WG ++GQLGLG P V +
Sbjct: 550 CFST----PIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQ- 604
Query: 389 QNRDTQLEVFCGSGFTYAIS 408
++VFCG ++ I+
Sbjct: 605 -----AVDVFCGDDYSACIT 619
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 179/408 (43%), Gaps = 65/408 (15%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++ WG LG G + + + P L+ S ++CG + L + GGKV
Sbjct: 69 QLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKV 128
Query: 94 FSWGRGSSGQLGH---------GEMVDA-----------LYPKP--VTFFDGHRYTITHI 131
+++G G+ G+LG+ G D PKP V F D + I I
Sbjct: 129 YTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRD--KCKIARI 186
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKNVHQ-- 182
S G +H+ +SD G L+ G G++G LG GD +PV+V S +NV
Sbjct: 187 SCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGK 246
Query: 183 -------IAC---GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
+ C G +HS+ D ++ +G G G+LG+ +R S+S P V +
Sbjct: 247 VRADPVIVTCCSAGAKHSMACTSD---GTLWTWGHGGNGRLGLGHNR-GSLS-PAVVDYI 301
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQA 284
D +IV ++A SA + +G LYTWG G ++ P+ + + Q
Sbjct: 302 LDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQV 361
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAA 343
A G H L LT G V G + E S VA+ K +S+++ V+ IAA
Sbjct: 362 ACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM---VAVPKHLSDIEAA-VLNIAA 417
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
G HSA VT ++ WG G +LG G+ +Q PK V + +NR
Sbjct: 418 GPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVA---DLRNR 462
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 143/358 (39%), Gaps = 68/358 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG+ DGQLG G +E + + L S+ + +ACG H LA+ G VF
Sbjct: 521 VWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQY-----GDVF 575
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVT-------FFDGHRYT--ITHISAGWNHSGFV-SDS 144
+WG +GQLG G + + P VT F G Y+ IT + + SG ++
Sbjct: 576 AWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEF 635
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G L+ G G+LG G+ + S + V +V AC + D L Q Y
Sbjct: 636 GDLWAWGAAESGKLGLGEDVASGSILTPQKVVF-SVPVCACSL--------DSLEMQAY- 685
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
R+ VS + G S A++A+G Y WG G+
Sbjct: 686 -------------KRVFCVSFSPLCSGT------------SHSLAITAQGECYAWGAGYY 720
Query: 264 -----NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+T++ P P + A G H L L+ DG++ G +
Sbjct: 721 GRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRRE-------DT 773
Query: 317 VSSTRPLSVAL-EKVSNLDGV-KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
S+T +S + ++ GV KV I+A HS VTE + WG + Q G G
Sbjct: 774 CSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGK 831
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+++ F +V ++A G+ H+LV+ Q++G+G LG+ + IR P +
Sbjct: 39 RIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVE-IRERVFPGLVP 97
Query: 231 GLHDIEIVGISANGDRSAALSAE-----GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
+ +S + SA L G +YT+G G + + P++ ++ Q
Sbjct: 98 FFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLG--NRGRLGYPKNKADGVAGYQGD 155
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+GDG+ D + +P +V D K+ +I+ GA
Sbjct: 156 F--------SGDGQ------------EDGPSWFTPKP-----SRVRFRDKCKIARISCGA 190
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+H+ +++ A+ WG G +G LG G+T D P V LG E
Sbjct: 191 DHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSE 232
>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
Length = 1088
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 172/424 (40%), Gaps = 125/424 (29%)
Query: 50 GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
G L D L P+LL + + V ++ GG H +T G++FSWG+G G+LGH
Sbjct: 283 GMLVDALLPKLLESTMMLDVQSISLGGKHAALITK-----HGEIFSWGQGKCGRLGHKIN 337
Query: 110 VDALYPKPVTFFD--------------------GHRYT---------------------- 127
+D +PK V + G YT
Sbjct: 338 MDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLP 397
Query: 128 -----------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
I++++ G H+ VS G LFT GDGTFG LGHG+ S S P +V S
Sbjct: 398 QKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN 457
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
V +ACG H T + DI
Sbjct: 458 GLCVKSVACGSWH---------------------------------------TAAIVDIM 478
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQSLPSSLS------FSQAALGW 288
I DR SA G L+TWG G N + LP+ ++ F+Q + G
Sbjct: 479 I-------DRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGR 531
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ LT G V +G S HG L + S+R SVA+ + L V I++G+ H
Sbjct: 532 MLTVGLTNMGRVYTMGSSIHGQLGN----LSSRDASVAIVE-GKLKEEFVKAISSGSYHV 586
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLE-VFCGSGFTYA 406
A +T + TWG G HGQLGLG++ D+ P V LGD+ Q+E + CGS FT A
Sbjct: 587 ASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDK------QVESIACGSNFTAA 640
Query: 407 ISRH 410
I H
Sbjct: 641 ICLH 644
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + ++V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSDPKVIENIRDQ-----TISYISCGESHTALIT 311
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTS-EHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVTNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T SDP+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SDPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGESHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G +H+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQ--TISYISCGESHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVF 364
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGDNSEGQIGLKNVTNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVI-QVACGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ ++ L +Y FG G+ G+L
Sbjct: 271 FGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALITDIGL---MYTFGDGRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 178/410 (43%), Gaps = 56/410 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSS----VI 89
K++S+G+ + +LG +D+L P Q+ +L + + LT + I
Sbjct: 48 KLFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTDEQNENDPTI 107
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
KV+ WG SG + + Y P T + + G + + ++ G +
Sbjct: 108 SNKVYMWGTNKSGNM---SLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G+ FGQLG GD R+ ++P V + N+++ I G+ HS+ + K V+G+G
Sbjct: 165 FGENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTK---AGHVFGWGYNV 221
Query: 210 RGQLG---VSKDRIRSVS-------------------------LPQVTIGLHDIEIVGIS 241
GQ+G V R+ S + LP + GL I+I +
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281
Query: 242 ANGDRSAALSAEGHLYTWGRGFNST----SDVNCPQSLPSSLSFS-------QAALGWNH 290
D + LSA G++Y++G T S++ + P+ + F+ Q + G +H
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASH 341
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L LT G V G G L S+ S L K N + +K++++AAG HS
Sbjct: 342 TLFLTSGGNVYSCGWGTEGRLGLGMDTSNRD--SPTLLKYFNQNKIKIVKVAAGGSHSMA 399
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
+ + + TWG G +G+LG GN D+ PK +N F + +++F G
Sbjct: 400 LDDQGRVYTWGNGSNGKLGHGNESDENLPKQIN----FFSHSNVIDIFAG 445
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELS-PQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGK 92
V+S+G+ G LG G L ++ P + + + + L+ G +H L LTS GG
Sbjct: 296 VYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTS-----GGN 350
Query: 93 VFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+S G G+ G+LG G + + P + +F+ ++ I ++AG +HS + D G ++T G
Sbjct: 351 VYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWG 410
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
+G+ G+LGHG+ + P +++ F + NV I G+ +SLVL+K+
Sbjct: 411 NGSNGKLGHGNESDENLPKQINFFSHSNVIDIFAGIDNSLVLIKE 455
>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
Length = 1867
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 164/365 (44%), Gaps = 43/365 (11%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG H+ +T G+VF+WG + G+LGHG VD PK V F I +
Sbjct: 1086 IACGVRHIALVTR-----QGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFL--ALTNIDFV 1138
Query: 132 SAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMR 188
+ G H+ VS SG LFT GDG G LGHG SH P +VS V V +ACG
Sbjct: 1139 ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTW 1198
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ---VTIGLHDIEI-------V 238
HS + + +++ FG G G LG DR SVS P+ + GL +++ V
Sbjct: 1199 HSALATAN---GKLFTFGDGAFGVLG-HGDR-ESVSYPKEVKMLSGLKTMKVACGVWHTV 1253
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNH 290
I +++ + L+TWG G + ++ LP+ +S F Q A G
Sbjct: 1254 AIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTL 1313
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT G V +GG+ HG L SS + L G V +I+ G H AV
Sbjct: 1314 TVALTTSGHVFTMGGTSHGQLG-----SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAV 1368
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR-----DTQLEVFCGSGFTY 405
+T + TWG G +G+LG G+ D+ P +V E + D + C F +
Sbjct: 1369 LTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCADQSVCSGCRQAFGF 1428
Query: 406 AISRH 410
RH
Sbjct: 1429 TRKRH 1433
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 27/295 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G+LG G D P+L+ +L+++ +ACG H A+++ G +F
Sbjct: 1101 EVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTCAVST-----SGDLF 1155
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G + G LGHG + PK V+ +G + ++ G HS + +G LFT G
Sbjct: 1156 TWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG--LQVLSVACGTWHSALATANGKLFTFG 1213
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DG FG LGHGD S S P +V ++ACG+ H++ +++ +++
Sbjct: 1214 DGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVMNQTGTSMSSKKLFT 1273
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
+G G + +LG + LP L D I+ + AL+ GH++T
Sbjct: 1274 WGDGDKNRLGHGNK--ETYLLPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTMGGTSH 1331
Query: 260 GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G+ +S SD P + L + + G +HV VLT EV G +G L
Sbjct: 1332 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRL 1386
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + +ACG +ALT+ G VF
Sbjct: 1270 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTT-----SGHVF 1324
Query: 95 SWGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G S GQLG G++ + + V F + IS G +H ++ +FT
Sbjct: 1325 TMGGTSHGQLGSSNSDGKLPCLVQDRLVGEF------VEEISCGDHHVAVLTSRSEVFTW 1378
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
G G+ G+LGHGD +P V + ++V I+C
Sbjct: 1379 GKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF 398
I IA G H A+VT + TWG G+LG G D PK+V EF V
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLV----EFLALTNIDFVA 1139
Query: 399 CGSGFTYAIS 408
CG T A+S
Sbjct: 1140 CGEYHTCAVS 1149
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 164/344 (47%), Gaps = 37/344 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG GQL + E+ N S V ++CG H L L G +
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLE-----DGTL 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
S G+ GQLG ++ + ++ + TI IS G NHS VSD G +++ GDG
Sbjct: 56 LSCGQNPYGQLGRKSNNSSI--EQISSLEAQ--TIVDISCGTNHSVAVSDEGSIYSWGDG 111
Query: 154 TFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G+ S + +P K++ N + QI+CG HSL L +D +V+ +G K GQ
Sbjct: 112 SEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSED---GRVFSWGQNKCGQ 168
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS- 265
LG+ I + PQ+ L I +V ++A G +S ALS G ++ WG+ GF S
Sbjct: 169 LGLGSQIINQAT-PQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSD 227
Query: 266 ----TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
T + SL +L + + G H VL+ DG V G HG L ++
Sbjct: 228 PMKGTFKPHAVNSL-RNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSV 286
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSA--VVTENRAIMTWGWG 363
P +K+ + G +V Q+A G H+ V + NR I+++G G
Sbjct: 287 P-----QKIEDYAG-QVSQVACGRYHTLLYVFSCNR-IVSFGKG 323
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+SWG GQLG G ++ ++ +PQL+ SL + ++ GG+ AL+ + G
Sbjct: 157 RVFSWGQNKCGQLGLGSQIINQATPQLV--KSLKGIPLVQVTAGGSQSFALS-----MSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF+WG+ ++GQLG KP + +IS G H+ +S G ++T G
Sbjct: 210 TVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFG 269
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
D T GQLG S P K+ + + V Q+ACG H+L+ + C N++ FG G
Sbjct: 270 DDTHGQLGQNSGNQTSVPQKIEDYAGQ-VSQVACGRYHTLLYVFSC--NRIVSFGKG 323
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 58/239 (24%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGNQVYG 204
++ GD FGQL K + + V +++CG +H+L LL+D +
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLED---GTLLS 57
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G GQLG + + S+ Q++ L IV IS + S A+S EG +Y+W
Sbjct: 58 CGQNPYGQLGRKSN---NSSIEQIS-SLEAQTIVDISCGTNHSVAVSDEGSIYSW----- 108
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
GDG LG + S+R +
Sbjct: 109 -------------------------------GDGSEGQLGTGNL----------SSRNFT 127
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPKVV 382
+K++ L K+IQI+ G HS ++E+ + +WG + GQLGLG+ +Q P++V
Sbjct: 128 P--KKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLV 184
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 18 NNAKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQLL 61
N +P+I Q VKV +SWG T GQLG G L + +
Sbjct: 468 NKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPT 527
Query: 62 NLSSLSSVSML--ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
L+SL V ++ ACGG H ALT I G VF WG+ GQLG G + YP T
Sbjct: 528 ELTSLRGVPLVRVACGGFHSFALT-----ISGSVFGWGKNDVGQLGLGNKENKSYP---T 579
Query: 120 FFDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
R + HI+ G +H+ ++ G +F G G+ GQLGHG + +P KV +
Sbjct: 580 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 639
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
++ Q+ CG H+LVL + ++Y FG G GQLG +D RS S PQ G
Sbjct: 640 DITQVTCGKHHTLVL--EGSKGRLYAFGQGIHGQLG--QDEARSCSNPQRVPG 688
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 139/305 (45%), Gaps = 26/305 (8%)
Query: 94 FSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
F WG GQLG G K VT G R + IS G +H+G V D G L+ C
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQR--VQSISCGKHHTGIVLDDGTLYMC 61
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G + GQLG R+ PV+VS+ + +ACG H+L + QV G+G R
Sbjct: 62 GANSKGQLGQD--RNQYKPVQVSALETVVIKHVACGDDHTLAVSDR---GQVLGWGRNDR 116
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQ G++ I + P++ L + V + S AL+ +G L++WG G
Sbjct: 117 GQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIG 176
Query: 263 FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
T+ + P L S + + A G H LT G V G + G L + +
Sbjct: 177 TLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA 236
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP- 379
P + N+ V IA G +H+A++T + + +G G GQLG G+ ++++P
Sbjct: 237 YP-----TLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPR 291
Query: 380 KVVNL 384
KV++L
Sbjct: 292 KVIDL 296
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 166/386 (43%), Gaps = 59/386 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG G ++ P LL V +ACG H LT+ G VF
Sbjct: 216 VFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTA-----DGGVFL 270
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS-GCLFTCGDGT 154
+G+GS GQLGHG + + P+ V G IT ++ G +H+ + S G L+ G G
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGS--DITQVTCGKHHTLVLEGSKGRLYAFGQGI 328
Query: 155 FGQLGHGDYRSHSSPVKV-------------SSFVNKNVHQIACGMRHSL---------- 191
GQLG + RS S+P +V SS + V I G H
Sbjct: 329 HGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDI 388
Query: 192 ---VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
+L +D + +++ QL L + I ++ D +
Sbjct: 389 QIKLLFRD-ISTRIFF-------QLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTL 440
Query: 249 ALSAEGHLYTWGRGFN-----STSDV-NCPQSLP----SSLSFSQAALGWNHVLVLTGDG 298
A+S + WGR +T D+ N P+ +S F + G H + LT DG
Sbjct: 441 AVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDG 500
Query: 299 EVLMLGGSHHGMLSDPERVS--STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ G + +G L V+ + RP ++++L GV ++++A G HS +T + +
Sbjct: 501 RLFSWGDNTYGQLGIGTLVTNYTDRP-----TELTSLRGVPLVRVACGGFHSFALTISGS 555
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ WG + GQLGLGN ++ +P ++
Sbjct: 556 VFGWGKNDVGQLGLGNKENKSYPTLL 581
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 147/351 (41%), Gaps = 33/351 (9%)
Query: 34 VKVWSWGAGTDGQLGT----GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
+ + WG+ +GQLG G+ E++ ++ LS V ++CG H +
Sbjct: 1 MATFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSG-QRVQSISCGKHHTGIVLD----- 54
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G ++ G S GQLG D KPV I H++ G +H+ VSD G +
Sbjct: 55 DGTLYMCGANSKGQLGQ----DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLG 110
Query: 150 CGDGTFGQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G GQ L GD + P + + ++ CG HS+ L +D +++ +G
Sbjct: 111 WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRD---GRLFSWGD 167
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
GQLG+ P L + +V ++ G S AL+ G ++ WG+
Sbjct: 168 NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQL 227
Query: 262 GFNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G + + P L + S A G +H +LT DG V + G G L +
Sbjct: 228 GLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNE 287
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA-IMTWGWGEHGQLG 369
P KV +L G + Q+ G H+ V+ ++ + +G G HGQLG
Sbjct: 288 VNP-----RKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLG 333
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 155/343 (45%), Gaps = 37/343 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGKV 93
++ GA + GQLG R ++ P + +S+L +V + +ACG H LA++ G+V
Sbjct: 58 LYMCGANSKGQLGQDR--NQYKP--VQVSALETVVIKHVACGDDHTLAVSD-----RGQV 108
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WGR GQ G P+P Y + G HS ++ G LF+ GD
Sbjct: 109 LGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDN 168
Query: 154 TFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T+GQLG G ++ + P +++S + ++ACG HS L + V+G+G G
Sbjct: 169 TYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFAL---TISGSVFGWGKNDVG 225
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------N 264
QLG+ + + P + + + I+ D +A L+A+G ++ +G+G +
Sbjct: 226 QLGLGNKENK--AYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS 283
Query: 265 STSDVNCPQSLPSSL--SFSQAALGWNHVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTR 321
+ ++VN P+ + + +Q G +H LVL G G + G HG L E S +
Sbjct: 284 NYNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSN 342
Query: 322 PLSV--------ALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
P V + EK S+ G V I AG H N A
Sbjct: 343 PQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAA 385
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)
Query: 34 VKVWSWGAGTDGQ--LGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
V+V WG GQ L TG + ++ P++L + + CG H +ALT G
Sbjct: 446 VQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTR-----DG 500
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++FSWG + GQLG G +V +P + ++ G HS ++ SG +F G
Sbjct: 501 RLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG 560
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG G+ + S P + + ++ V IACG H+ +L D V+ FG G G
Sbjct: 561 KNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTAD---GGVFLFGQGSEG 617
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS-AEGHLYTWGRGF------N 264
QLG + V+ P+ I L +I ++ + L ++G LY +G+G +
Sbjct: 618 QLGHGSN-YNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD 675
Query: 265 STSDVNCPQSLP 276
+ PQ +P
Sbjct: 676 EARSCSNPQRVP 687
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 161/386 (41%), Gaps = 54/386 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ +G G++GQLG G ++E++P+ + S ++ + CG H L L G++++
Sbjct: 268 VFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSK----GRLYA 323
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G+G GQLG E P+ V + H S N S C++ G F
Sbjct: 324 FGQGIHGQLGQDEARSCSNPQRVP-----GPWVPHSSTEKNSSSKGRVVRCIYAGGHHCF 378
Query: 156 GQLGHGD--------YRSHSSPV------------------KVSSFVNKNVHQIACGMRH 189
+ +R S+ + + +ACG H
Sbjct: 379 STATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDH 438
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+L + QV G+G RGQ G++ I + P++ L + V + S A
Sbjct: 439 TLAVSDRV---QVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMA 495
Query: 250 LSAEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
L+ +G L++WG G T+ + P L S + + A G H LT G
Sbjct: 496 LTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGS 555
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G + G L + + + P + N+ V IA G +H+A++T + +
Sbjct: 556 VFGWGKNDVGQLGLGNKENKSYP-----TLLRNMRSQMVKHIACGQDHTAMLTADGGVFL 610
Query: 360 WGWGEHGQLGLGNTCDQIHP-KVVNL 384
+G G GQLG G+ ++++P KV++L
Sbjct: 611 FGQGSEGQLGHGSNYNEVNPRKVIDL 636
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 134/308 (43%), Gaps = 31/308 (10%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ +ACG H LA++ V+G WGR GQ G P+P Y
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLG-----WGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACG 186
+ G HS ++ G LF+ GD T+GQLG G ++ + P +++S + ++ACG
Sbjct: 484 VKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS L + V+G+G GQLG+ + S P + + + I+ D
Sbjct: 544 GFHSFAL---TISGSVFGWGKNDVGQLGLGNKENK--SYPTLLRNMRSQMVKHIACGQDH 598
Query: 247 SAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTG- 296
+A L+A+G ++ +G+G ++ ++VN P+ + + +Q G +H LVL G
Sbjct: 599 TAMLTADGGVFLFGQGSEGQLGHGSNYNEVN-PRKVIDLMGSDITQVTCGKHHTLVLEGS 657
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSV--------ALEKVSNLDGVKVIQIAAGAEHS 348
G + G HG L E S + P V + K S+ G V I AG H
Sbjct: 658 KGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTAKNSSSKGRVVRCIYAGGHHC 717
Query: 349 AVVTENRA 356
N A
Sbjct: 718 FSTATNAA 725
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 158/328 (48%), Gaps = 32/328 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LS+ V +A GG H +ALT +
Sbjct: 3016 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3069
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 3127
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3242
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3243 HGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3302
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+P V L+G K+ ++A G+ HS
Sbjct: 3303 KP-----TLVQGLEGQKITRVACGSSHS 3325
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ +L+S + V + A G H LAL + G+VFSWG G G+LGHG+ V
Sbjct: 481 DILGPQLVQSLASRNIVKIAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++IV +S S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
G H L LT D EV G + D R+ T+P AL LD ++ I
Sbjct: 713 IDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRI--TKPDPTAL---PGLDSKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4052 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDIAAG 4104
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L+T G G +G+LGHGD P V + V IACG +L
Sbjct: 4105 GAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4164
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4165 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTK 4219
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4220 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4241
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4242 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4290
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4291 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4322
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA-----AGDLY 4118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4235
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4236 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+++ S+LS V +ACG + A+T+
Sbjct: 516 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 570
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 571 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ +++CG + S+ L KD QVY +G G
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKD---GQVYSWGKG 685
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ + A AL+ + +Y+WG
Sbjct: 686 DNQRLGHGTE--EHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWG 735
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3959 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4014
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ IAAG HSA +T + TWG G +G+LG
Sbjct: 4075 KLGHGNRSPCDRP-----RVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG 4129
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4130 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 4158
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4014
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4071
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
+ G+LG P+V L IE+V I+A G SA ++A G LYTWG+ G
Sbjct: 4072 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG 4129
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ D P+ + + + + G L LT D V G +G L
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L GV V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4190 CKVPM-----KIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4244
Query: 379 PKVVN 383
P+ V
Sbjct: 4245 PRQVQ 4249
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 132/359 (36%), Gaps = 71/359 (19%)
Query: 87 SVIGGKVFSWGRGSSGQLG-----------HGEMVDAL---------------------- 113
+ I KVF WG QLG E + AL
Sbjct: 2959 ATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Query: 114 --------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
P+ +T + + +G H+ ++ G +F+ G+G
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGH + P + + K + IACG HS + ++Y +G G+ G+L
Sbjct: 3079 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS---SGELYSWGLGEYGRL 3135
Query: 214 GVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
G D + V + L H + V + ++ AL+ EG +++WG G +
Sbjct: 3136 G-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
N PQ++ + Q G L LT G V G + L V +P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP-- 3252
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K+I +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 3253 ---QVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G PQ + + V + CG LALT G V++
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK-----SGVVWT 3232
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG V P+ V G + I H++ G H V+D+G ++ GD
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKK--IIHVAVGALHCLAVTDTGQVYAWGDNDH 3290
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQ G+G + P V + + ++ACG HS+
Sbjct: 3291 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3326
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + S P++ + V QIAC + L+L ++ +VY + S G
Sbjct: 429 WGLIGWKYYANVSGPIQCEGLASLGVTQIACAEKRFLILSRN---GRVYTQAYNSDILG- 484
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ L IV I+A+ D AL+A G +++WG G
Sbjct: 485 -------------PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ + S+LS QA A G + +T +GE+ G ++G L
Sbjct: 532 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 591 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 645
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 646 CKTPKLI---EKLQDLDI-VKVSCGSQFSVALTK 675
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + S+ + A+ G H + LT DG+V G
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + +WG GE+G
Sbjct: 3079 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYG 3133
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3134 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3164
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 213 LGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDRSAALSAEGH-------------L 256
L +++ +R + LPQ + I L +V I A+ DR A H +
Sbjct: 368 LSPNENFLRYLILPQDNELAIDLRQTAVV-IMAHLDRLATPCMPPHCSSPTSHKGSLQEV 426
Query: 257 YTWGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
WG G+ ++V+ P +SL +Q A L+L+ +G V +++ +
Sbjct: 427 IAWGLIGWKYYANVSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT--QAYNSDILG 484
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLG 371
P+ V S L +++IAA ++ H + + +WG G+ G+LG G
Sbjct: 485 PQLVQS-------------LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 531
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+T PK+++ Q + + CGS ++ AI+
Sbjct: 532 DTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT 568
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4274 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 4332
>gi|380789959|gb|AFE66855.1| secretion-regulating guanine nucleotide exchange factor [Macaca
mulatta]
Length = 458
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 146/304 (48%), Gaps = 34/304 (11%)
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+P++ + +F+WG S GQLG G D L P+ + F R ++ I+ G HS V+D
Sbjct: 11 APATAV---LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTD 66
Query: 144 SGCLFTCG---DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
G LF CG DG G LGH + + +P K S + Q+ACG +++L ++
Sbjct: 67 IGDLFVCGLNKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIILTEN---G 120
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
QV GS GQLGV R V +PQ I LH ++V I+A + A +A G ++ WG
Sbjct: 121 QVLSCGSNSFGQLGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWG 178
Query: 261 RGFNSTSDVNCP-QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGG 305
G S CP Q+LP + L S+A G +H LT GEV + G
Sbjct: 179 TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGS 238
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ HG L+ ++ P+ +E KV + +G H TE + TWG ++
Sbjct: 239 NKHGQLATE---AAFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADY 294
Query: 366 GQLG 369
GQLG
Sbjct: 295 GQLG 298
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 173/400 (43%), Gaps = 41/400 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D L PQ LN SV + GG H +T G +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDI-----GDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G D Y P G I ++ GW+ + ++++G + +CG +
Sbjct: 72 VCGLNKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIILTENGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V IA G+RH+L + Q +G G G+
Sbjct: 130 FGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHALAATASGIVFQ-WGTGLASCGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
R G + + P GL + + + + A D SA+L+ G +Y WG
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAT 246
Query: 265 STSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP------ 314
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEG 306
Query: 315 ---ERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
E+ S P S L + S+L + +++ G+EH+ V +WGW EHG G
Sbjct: 307 WKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVI-GGVCYSWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G + PK V + + L V CG+G + A+ +
Sbjct: 366 DGTEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
KV++WG GQLG D P +LLN L L+ + ++CG H
Sbjct: 285 KVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 344
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
LA VIGG +SWG G G G + PKPV GH
Sbjct: 345 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 398
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ + A H V D + D T
Sbjct: 399 LCQLPA---HPALVQDPKVTYLSPDAT 422
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + V+ + G H++A T GK
Sbjct: 232 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTET-----GK 285
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYPKPVTFFDG----HRYT-ITHISAGWNHS 138
VF+WGR GQLG E D+ P + H T T +S G H+
Sbjct: 286 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHN 345
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
V C ++ G G G G + +P V + ++ + + CG HSL L +
Sbjct: 346 LAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 162/393 (41%), Gaps = 83/393 (21%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSM------LACGGAHVLALTSPSS 87
VW+WG TDGQLG +D P+ L + SSVSM +ACG AH L L
Sbjct: 85 VWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFL----- 139
Query: 88 VIGGKVFSWGRGSSGQLGHG------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
+ G+V+S G GQLGH E VDAL P YTIT I+ G HS +
Sbjct: 140 -VDGQVYSCGSNDQGQLGHKKHRSKPERVDALEP----------YTITQIACGETHSLAL 188
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS------------------------FVN 177
+ +G +F GD QLG S P SS F+
Sbjct: 189 TSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMT 248
Query: 178 K----------NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227
+ + QI CG SLVL + V+ +G GQL + + +++V +P
Sbjct: 249 RPRLVRALTGHKIVQIVCGANFSLVLSER---GDVFAWGDNTSGQLCLRE--LKTVPVPT 303
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV--NCPQSLPSSLSF---- 281
+ L+ I I ++A G + AL+ G +Y+WG V P ++PS L
Sbjct: 304 LVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ 363
Query: 282 --SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ A G +H +VLT G V G G L + P + L G
Sbjct: 364 FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINP-----RMIFELMGKSAS 418
Query: 340 QIAAGAEHSAV-VTENRAIMTWGWGEHGQLGLG 371
Q+ G H+ V + I +G G +GQLG G
Sbjct: 419 QVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG 451
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 151/343 (44%), Gaps = 63/343 (18%)
Query: 89 IGGKVFSWGRGSSGQLGHGEMVD--ALYPKPV---TFFDGHRYTI-THISAGWNHSGFVS 142
+ G V++WG + GQLG D P+P F T+ + I+ G H+ F+
Sbjct: 81 LAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLV 140
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
D G +++CG GQLGH +RS P +V + + QIACG HSL L + QV
Sbjct: 141 D-GQVYSCGSNDQGQLGHKKHRS--KPERVDALEPYTITQIACGETHSLALTSN---GQV 194
Query: 203 YGFGSGKRGQLGVSK------------------------DRIRSVSL--------PQVTI 230
+ +G K QLG++ D + + +L P++
Sbjct: 195 FAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVR 254
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS-----------SL 279
L +IV I + S LS G ++ WG ++TS C + L + +
Sbjct: 255 ALTGHKIVQIVCGANFSLVLSERGDVFAWG---DNTSGQLCLRELKTVPVPTLVKELYGI 311
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
Q A G H L LT +G+V G + G L V T P ++ ++ L+
Sbjct: 312 PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLG----VGDTAPHTIP-SRLKTLEHQFCA 366
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
IA G +HS V+TE + ++G G GQLG G ++I+P+++
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMI 409
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 48/262 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+S G+ GQLG + + P+ ++ +++ +ACG H LALTS G+VF
Sbjct: 143 QVYSCGSNDQGQLGHKKHRSK--PERVDALEPYTITQIACGETHSLALTS-----NGQVF 195
Query: 95 SWGRGSSGQLGHG----------------------EMVDAL------------YPKPVTF 120
+WG + QLG + VD L P+ V
Sbjct: 196 AWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRA 255
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
GH+ I I G N S +S+ G +F GD T GQL + ++ P V +
Sbjct: 256 LTGHK--IVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPI 313
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
Q+A G RH+L L QVY +G+ + GQLGV ++ P L I
Sbjct: 314 RQLAAGGRHTLAL---TFNGQVYSWGNNQFGQLGVGDTAPHTI--PSRLKTLEHQFCAHI 368
Query: 241 SANGDRSAALSAEGHLYTWGRG 262
+ D S L+ G +Y++G G
Sbjct: 369 ACGEDHSVVLTETGGVYSFGAG 390
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG GQLG G P L + +ACG H + LT G V+
Sbjct: 331 QVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTE-----TGGVY 385
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDG 153
S+G G GQLGHG + + + P+ + F+ + + + G H+ F + ++ G G
Sbjct: 386 SFGAGGQGQLGHGTLQNEINPRMI--FELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLG 443
Query: 154 TFGQLGHG 161
GQLG G
Sbjct: 444 GNGQLGTG 451
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 160/341 (46%), Gaps = 29/341 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG G++G LGHGE +P V G I ++ G H+ +S G +F+ G
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGK--DIRKVACGATHTLALSKDGEVFSWGS 266
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LG G R +P+++ + N+ Q+AC HS + ++ FG GQ
Sbjct: 267 GYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQ 326
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-- 270
LG+ +D++ + S Q L + +I ++ SAAL+ G L+ W G N + +
Sbjct: 327 LGIPEDKLLT-SYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLW--GCNESGQLGNG 383
Query: 271 --CPQSLPSSL---------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGM----LSDPE 315
SLPS L + + A G H +T G + G + +G L+D +
Sbjct: 384 NYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGAHLNDNQ 443
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T ++V + ++ + + +A G H+AVVT+ I TWG G+ G+LG G+ +
Sbjct: 444 DDHVTYNVAVRVRVPTDF---RCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLN 500
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA-ISRHCLPSQ 415
+ P + +G E ++ V CG T ++R +P Q
Sbjct: 501 RHLPTEIEIGMEGKHVRG---VSCGRAHTACTVTRAWVPDQ 538
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 154/348 (44%), Gaps = 38/348 (10%)
Query: 30 EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
++ +++WG GT+G LG G E P ++ + +ACG H LAL+
Sbjct: 203 KEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKD---- 258
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV---SDSGC 146
G+VFSWG G G+LG G + D P + + +T ++ HS V S G
Sbjct: 259 -GEVFSWGSGYGGRLGQGHLRDRFTPIRICGLES--LNLTQVACNEFHSAAVCACSKQGA 315
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
LF+ G+ +GQLG + + +S ++ VSS + ++ACG HS L + ++ +
Sbjct: 316 LFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEH---GSLWLW 372
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE---IVGISANGDRSAALSAEGHLYTWG-- 260
G + GQLG S SLP + +D+ ++ ++ SA ++ +G ++ G
Sbjct: 373 GCNESGQLG--NGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430
Query: 261 ------------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+ + T +V +P+ A G +H V+T GE+ G
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G L + ++ P + + ++G V ++ G H+A T RA
Sbjct: 491 GRLGHGDNLNRHLPTEIEI----GMEGKHVRGVSCGRAHTA-CTVTRA 533
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 52/270 (19%)
Query: 141 VSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
V + C ++T G+GT G LGHG+ + P V + + K++ ++ACG H+L L KD
Sbjct: 202 VKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKD--- 258
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +GSG G+LG + +R P GL + + ++ N SAA+ A
Sbjct: 259 GEVFSWGSGYGGRLG--QGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCA------- 309
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ G + G + +G L PE
Sbjct: 310 ----------------------------------CSKQGALFSFGENDYGQLGIPE---- 331
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ L+ ++ VS+L K+ ++A G+ HSA + E+ ++ WG E GQLG GN P
Sbjct: 332 DKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLP 391
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ G++ ++ D +EV CG + I++
Sbjct: 392 SLLEAGNDLRH-DAVMEVACGDQHSAFITK 420
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 160/378 (42%), Gaps = 35/378 (9%)
Query: 22 PKIEEEEEEQQVV---KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAH 78
P + E V +WG GQLG G +P ++L + + + + G H
Sbjct: 42 PVAAQNEPSPSAVGSDAFLAWGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFH 101
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
LALTS G V +WGR SGQLG G V + P V G T+T ++AG+ HS
Sbjct: 102 SLALTS-----AGTVLAWGRNDSGQLGDGTTVSSSTPVVVRLPVG--VTVTAVAAGFGHS 154
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++ +G + G +FGQLG G S S+PV V V V +A G HSL L
Sbjct: 155 LALTSTGVVLAWGSNSFGQLGDGTTVSSSTPVAVRLPVGVTVTAVAAGSGHSLALTSV-- 212
Query: 199 GNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+G+ GQLG VS +V LP T + ++ S AL++ G
Sbjct: 213 -GAALAWGNNFSGQLGDGTTVSSSTPVAVRLPVGT------TVTAVAGGSHHSLALTSAG 265
Query: 255 HLYTWGRGFN--------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
WG F+ +S SLP + + A G H + LT G L G +
Sbjct: 266 AALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSN 325
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L D S+ P++V+L + + + A H+ +T A + WG G
Sbjct: 326 GDGQLGDGTNADSSVPIAVSLPAGATITAIAAHDGA----HNLAITSTGAALAWGGNGDG 381
Query: 367 QLGLGNTCDQIHPKVVNL 384
QLG G D P V+L
Sbjct: 382 QLGDGTNADSSVPIAVSL 399
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 139/324 (42%), Gaps = 28/324 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG GQLG G +P ++ L +V+ +A G H LALTS G V
Sbjct: 110 TVLAWGRNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTS-----TGVVL 164
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG S GQLG G V + P V G T+T ++AG HS ++ G G+
Sbjct: 165 AWGSNSFGQLGDGTTVSSSTPVAVRLPVG--VTVTAVAAGSGHSLALTSVGAALAWGNNF 222
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S S+PV V V V +A G HSL L +G GQLG
Sbjct: 223 SGQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTS---AGAALAWGGNFSGQLG 279
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWGR--------GFNS 265
D S V + L V A GD S AL++ G WG G N+
Sbjct: 280 ---DGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNA 336
Query: 266 TSDVNCPQSLPSSLSFSQAAL-GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
S V SLP+ + + A H L +T G L GG+ G L D S+ P++
Sbjct: 337 DSSVPIAVSLPAGATITAIAAHDGAHNLAITSTGAALAWGGNGDGQLGDGTNADSSVPIA 396
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS 348
V+L G + IAA EHS
Sbjct: 397 VSLPA-----GTTITAIAASVEHS 415
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQLG G +P +++L ++V+ LA G AH +ALTS G +WG
Sbjct: 269 AWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTS-----AGAALAWG 323
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G D+ P V+ G T G H+ ++ +G G GQ
Sbjct: 324 SNGDGQLGDGTNADSSVPIAVSLPAGATITAIAAHDG-AHNLAITSTGAALAWGGNGDGQ 382
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
LG G S P+ VS + IA + HSL L
Sbjct: 383 LGDGTNADSSVPIAVSLPAGTTITAIAASVEHSLAL 418
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 176/386 (45%), Gaps = 46/386 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG---GAHVLALTSPSSVIGGK 92
V S G G+ G+LG G +++ + + + ++ ++ H LALT+ G
Sbjct: 336 VRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTE-----GC 390
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+FSWG G G+LGHG + PK + R + +SAG+ HS V+ G LFT G+
Sbjct: 391 IFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVC-VSAGYRHSACVTQEGQLFTWGE 449
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG GD S + PV V + + CG H+LVL +D G V+ FG+G G+
Sbjct: 450 GDYGRLGLGDNTSRNVPVLVKDIASAG--SVVCGSSHTLVLAQD--GLTVWSFGAGDNGK 505
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTSD 268
LG D R V P+V ++ + + A S AL+ G +++WG G S
Sbjct: 506 LG-HGDTSR-VYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDA 563
Query: 269 VNCPQSLPSSLSFSQAA---LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+L L+F++ G H + LT + EV G + G + P+SV
Sbjct: 564 TFMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGH---TNSPISV 620
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVT---ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V L+ V + QI+AG HS T +R +++W P V
Sbjct: 621 PTQ-VQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWS----------------RPYCV 663
Query: 383 NLGDE-FQNRDTQLEVFCGSGFTYAI 407
+L + F+ + L +C S T A+
Sbjct: 664 DLSESTFKKMNNFLSSYCSSLATTAL 689
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG SS QL ++PK V F + + AG + VS GC+ +CG
Sbjct: 286 VYAWGSNSSHQLAELGSDKIVFPKKVKSFGNSQM----LEAGQYCTFAVSGDGCVRSCGK 341
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKD-CLGNQVYGFGSG 208
G++G+LG GD + S+ + + + +I+ H+L L + C ++ +G G
Sbjct: 342 GSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGC----IFSWGDG 397
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG P++ G L +V +SA SA ++ EG L+TWG
Sbjct: 398 DYGKLGHGSSLTHKS--PKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRL 455
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSST 320
G + N P + S G +H LVL DG V G +G L +
Sbjct: 456 GLGDNTSRNVPVLVKDIASAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVY 515
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
RP + + +++G+ ++ AG+++S + ++ + +WG G
Sbjct: 516 RP-----KVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCG 553
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 16/232 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G P L+ ++S + CG +H L L G V+
Sbjct: 443 QLFTWGEGDYGRLGLGDNTSRNVPVLVK--DIASAGSVVCGSSHTLVLAQD----GLTVW 496
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G G +G+LGHG+ PK + +G + + AG +S ++DSG +F+ G G
Sbjct: 497 SFGAGDNGKLGHGDTSRVYRPKVIESINGMMF--YKLCAGSQYSLALNDSGQVFSWGCGA 554
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G D + P + V I G H + L + N+VY +G+ GQ G
Sbjct: 555 CLGCGSPD-ATFMKPTLIDELTFTRVVDITSGDGHCMALTHN---NEVYCWGNNAMGQCG 610
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA---EGHLYTWGRGF 263
+ +S+P L+++ I ISA S A +A + H+ +W R +
Sbjct: 611 LGHTN-SPISVPTQVQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPY 661
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q + VWS+GAG +G+LG G P+++ + L G + LAL
Sbjct: 490 QDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALND-----S 544
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-ITHISAGWNHSGFVSDSGCLFT 149
G+VFSWG G+ LG G DA + KP T D +T + I++G H ++ + ++
Sbjct: 545 GQVFSWGCGAC--LGCGS-PDATFMKP-TLIDELTFTRVVDITSGDGHCMALTHNNEVYC 600
Query: 150 CGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSL 191
G+ GQ G G S S P +V N +HQI+ G HS+
Sbjct: 601 WGNNAMGQCGLGHTNSPISVPTQVQQLNNVTIHQISAGTSHSI 643
>gi|355752291|gb|EHH56411.1| Guanine nucleotide exchange factor-related protein [Macaca
fascicularis]
Length = 458
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 141/295 (47%), Gaps = 31/295 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG- 151
+F+WG S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDIGDLFVCGL 75
Query: 152 --DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
DG G LGH + + +P K S + Q+ACG +++L ++ QV GS
Sbjct: 76 NKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIILTEN---GQVLSCGSNS 129
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLGV +R +PQ I LH ++V I+A + A +A G ++ WG G S
Sbjct: 130 FGQLGVPHG-LRRCVVPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWGTGLASCGRR 187
Query: 270 NCP-QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
CP Q+LP + L S+A G +H LT GEV + G + HG L+
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATE 247
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ P+ +E KV + +G H TE + TWG ++GQLG
Sbjct: 248 ---AAFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 176/405 (43%), Gaps = 43/405 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D L PQ LN SV + GG H +T G +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDI-----GDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G D Y P G I ++ GW+ + ++++G + +CG +
Sbjct: 72 VCGLNKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIILTENGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V IA G+RH+L + Q +G G G+
Sbjct: 130 FGQLGVPHG-LRRCVVPQAIELHKEKVVC-IAAGLRHALAATASGIVFQ-WGTGLASCGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
R G + + P GL + + + + A D SA+L+ G +Y WG
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAT 246
Query: 265 STSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP------ 314
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEG 306
Query: 315 ---ERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
E+ + P S L + S+L + +++ G+EH+ V +WGW EHG G
Sbjct: 307 WKLEKQDTFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVI-GGVCYSWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
G + PK V + + L V CG+G + A+ + LP+
Sbjct: 366 DGTEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ--LPA 404
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
KV++WG GQLG D P +LLN L L+ + ++CG H
Sbjct: 285 KVFTWGRADYGQLGRKLETYEGWKLEKQDTFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 344
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
LA VIGG +SWG G G G + PKPV GH
Sbjct: 345 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 398
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ + A H V D + D T
Sbjct: 399 LCQLPA---HPALVQDPKVTYLSPDAT 422
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + V+ + G H++A T GK
Sbjct: 232 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTET-----GK 285
Query: 93 VFSWGRGSSGQLGHG-EMVDAL-YPKPVTFFDGHRYT------------ITHISAGWNHS 138
VF+WGR GQLG E + K TF R T +S G H+
Sbjct: 286 VFTWGRADYGQLGRKLETYEGWKLEKQDTFLPCSRLLNNMPSSLHCLTGATEVSCGSEHN 345
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
V C ++ G G G G + +P V + ++ + + CG HSL L +
Sbjct: 346 LAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 12/194 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG DGQLG GR+ S P+++ NLS + V + A G AH +AL+ + G
Sbjct: 167 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 220
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWGR GQLG G + P + D + + ++ G H+ ++ SG +FT GD
Sbjct: 221 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQK--VEFLACGGCHTALLTKSGLVFTFGD 278
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH ++ P V+ V V QIACG +H+L + D +V+ FGSGK GQ
Sbjct: 279 GKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQ 336
Query: 213 LGVSKDRIRSVSLP 226
LG R + + P
Sbjct: 337 LGNGGTRNQLIPRP 350
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV + S S P++ L + +
Sbjct: 147 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 202
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
V ISA S ALS G++Y+WGR G T + P + + A G
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS- 348
H +LT G V G +G L + RP V+ L G +V QIA G +H+
Sbjct: 263 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHTL 317
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
A V++ + ++G G+ GQLG G T +Q+ P+
Sbjct: 318 AYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+H + G H LVL D GK + S + R + L + I+
Sbjct: 108 KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 150
Query: 239 GISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGW 288
I+ S ALS G L+ WG R F STS ++L S + Q + G
Sbjct: 151 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 209
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H + L+ G V G + G L + P + LD KV +A G H+
Sbjct: 210 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCI-----EALDDQKVEFLACGGCHT 264
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYA 406
A++T++ + T+G G++GQLG +T +++ P++V +G NR TQ+ CG T A
Sbjct: 265 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVG----NRVTQIA--CGRQHTLA 318
>gi|355566686|gb|EHH23065.1| Guanine nucleotide exchange factor-related protein [Macaca mulatta]
Length = 458
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 141/295 (47%), Gaps = 31/295 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG- 151
+F+WG S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDIGDLFVCGL 75
Query: 152 --DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
DG G LGH + + +P K S + Q+ACG +++L ++ QV GS
Sbjct: 76 NKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIILTEN---GQVLSCGSNS 129
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLGV R V +PQ I LH ++V I+A + A +A G ++ WG G S
Sbjct: 130 FGQLGVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWGTGLASCGRR 187
Query: 270 NCP-QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
CP Q+LP + L S+A G +H LT GEV + G + HG L+
Sbjct: 188 LCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATE 247
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ P+ +E KV + +G H TE + TWG ++GQLG
Sbjct: 248 ---AAFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 176/405 (43%), Gaps = 43/405 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D L PQ LN SV + GG H +T G +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDI-----GDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G D Y P G I ++ GW+ + ++++G + +CG +
Sbjct: 72 VCGLNKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIILTENGQVLSCGSNS 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V IA G+RH+L + Q +G G G+
Sbjct: 130 FGQLGVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHALAATASGIVFQ-WGTGLASCGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FN 264
R G + + P GL + + + + A D SA+L+ G +Y WG
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAT 246
Query: 265 STSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP------ 314
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 247 EAAFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEG 306
Query: 315 ---ERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
E+ S P S L + S+L + +++ G+EH+ V +WGW EHG G
Sbjct: 307 WKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVI-GGVCYSWGWNEHGMCG 365
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
G + PK V + + L V CG+G + A+ + LP+
Sbjct: 366 DGTEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ--LPA 404
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
KV++WG GQLG D P +LLN L L+ + ++CG H
Sbjct: 285 KVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 344
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
LA VIGG +SWG G G G + PKPV GH
Sbjct: 345 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 398
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ + A H V D + D T
Sbjct: 399 LCQLPA---HPALVQDPKVTYLSPDAT 422
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + V+ + G H++A T GK
Sbjct: 232 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTET-----GK 285
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYPKPVTFFDG----HRYT-ITHISAGWNHS 138
VF+WGR GQLG E D+ P + H T T +S G H+
Sbjct: 286 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHN 345
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
V C ++ G G G G + +P V + ++ + + CG HSL L +
Sbjct: 346 LAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
K+++ G T+G+LG G L P +++LS+ V +A GG H +ALT +
Sbjct: 2783 KIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 2836
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++
Sbjct: 2837 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKR--IRDIACGSSHSAAITSSGELYSW 2894
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 2895 GLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 2951
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2952 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3009
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3010 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3069
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3070 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3096
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 129/259 (49%), Gaps = 24/259 (9%)
Query: 56 LSPQLLNLSSLSSVSMLACG----GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
L+P L++ SLSS M+ G H LAL+S G+VFSWG G G+LGHG+
Sbjct: 445 LAPMLIH--SLSSRKMVKLAAHPDGQHYLALSS-----NGEVFSWGCGDGGRLGHGDTTY 497
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
P + F+G + + HI+ G +S ++ G L+T G G +G+LGHG ++P
Sbjct: 498 LEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTP 557
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V++ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 558 MLVTALKGLKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLV 614
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSF 281
L D++IV + S AL+ +G +YTWG+G N + V P+ L +
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674
Query: 282 SQAALGWNHVLVLTGDGEV 300
A+G H L LT DGEV
Sbjct: 675 VDVAVGSTHCLALTDDGEV 693
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 141/317 (44%), Gaps = 48/317 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G++F
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 3918
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V GHR +G + ++D +++ GDG
Sbjct: 3919 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 3978
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G +P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4035
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL--YTWGRGFNSTSDVNC 271
S D +R P+ GL +++ I+ + +G + + WG
Sbjct: 4036 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWG----------- 4081
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
LP W+ G GEV G + G L D + RP VA
Sbjct: 4082 ---LPR----------WS-----LGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVA----- 4118
Query: 332 NLDGVKVIQIAAGAEHS 348
L G K+ ++A G+ H+
Sbjct: 4119 ALQGKKINRVACGSAHT 4135
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 20/252 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P ++ + V +ACG + A+T +
Sbjct: 478 EVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT-----VD 532
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P VT G + +G + V+++G +++
Sbjct: 533 GELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSW 592
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P V + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 593 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 649
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
+LG D V P++ L ++V ++ AL+ +G +++WG F++
Sbjct: 650 QRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDT 707
Query: 266 T-SDVNCPQSLP 276
S+ P++LP
Sbjct: 708 LFSNKKQPKALP 719
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 137/354 (38%), Gaps = 86/354 (24%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 3852 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 3904
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG LFT G G +G+LGHGD P V + V +ACG +L
Sbjct: 3905 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 3964
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + P L + ++ + S AL+
Sbjct: 3965 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTK 4019
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4020 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4041
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI--------------- 357
RP +V L G KVI IA G+ H TE+ I
Sbjct: 4042 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLG 4090
Query: 358 --MTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
TWG + GQLG G T P++V L + NR V CGS T + S
Sbjct: 4091 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINR-----VACGSAHTLSWS 4139
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3759 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3814
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3874
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L GV+V+ IAAG HSA +T + + TWG G +G+LG
Sbjct: 3875 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG 3929
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V D Q ++V CGSG
Sbjct: 3930 HGDSEDQLKPKLV---DALQGHRV-IDVACGSG 3958
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV--QLIGGEQTLFAVTADGKLYAT 3814
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSE---GEVYSWGEA 3871
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L +E+V I+A G SA ++A G L+TWG+G
Sbjct: 3872 EDGKLGHGNRS--PCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG 3929
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ S+ L +L + G L LT D V G +G L
Sbjct: 3930 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 3989
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ VI++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3990 CKTPM-----KIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4044
Query: 379 PKVVN 383
P+ V
Sbjct: 4045 PRQVQ 4049
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2728 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 2785
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ + P+ + S+ + A+ G H + LT DG+V G
Sbjct: 2786 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 2845
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + +WG GE+G
Sbjct: 2846 DDGKLGHFSRMNCDKP-----RLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYG 2900
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2901 RLGHGDNTTQLRPKLVKVLLGHRV------IQVACGS 2931
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 44/273 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G LG Y + + P+ S + V QI C + L+L SG
Sbjct: 391 WGLLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLIL-----------SSSG-----A 434
Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFNS 265
V +S +L P + L ++V ++A +G ALS+ G +++WG G
Sbjct: 435 VYTQNYKSTTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD 494
Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
T+ + P ++ ++ + QA A G + +T DGE+ G ++G L
Sbjct: 495 TTYLEEP-TMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSED 553
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
T P+ V+ L G+KV+ +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 554 QTTPM-----LVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 608
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK+V ++ Q+ D ++V CGS F+ A+++
Sbjct: 609 KTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 637
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G +P ++ + V + CG +ALT G V++
Sbjct: 3971 VWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTK-----SGAVYT 4025
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL-------- 147
WG+G +LGHG P+ V G + + I+ G H ++ G +
Sbjct: 4026 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKK--VIAIATGSLHCVCCTEDGRIKVFQWGLP 4083
Query: 148 ---------FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+T GD GQLG G + P V++ K ++++ACG H+L
Sbjct: 4084 RWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 237 IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGW 288
+V I+ SAA++ +G LYTWGRG S+ D P + + L A G
Sbjct: 516 VVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGS 575
Query: 289 N--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
L +T +G+V G +G L P V EK+ +LD ++++ G++
Sbjct: 576 GDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQDLD---IVKVCCGSQ 630
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
S +T++ + TWG G++ +LG G D+ H + L D Q + ++V GS A
Sbjct: 631 FSVALTKDGQVYTWGKGDNQRLGHGT--DE-HVRFPKLLDTLQGKKV-VDVAVGSTHCLA 686
Query: 407 IS 408
++
Sbjct: 687 LT 688
>gi|344280856|ref|XP_003412198.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
nucleotide exchange factor-like [Loxodonta africana]
Length = 454
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 174/414 (42%), Gaps = 49/414 (11%)
Query: 26 EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTS 84
E E +++WGA + GQLG G D L PQ LN V + GG H +T
Sbjct: 9 ESAPESARAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCEPGCVRRITGGGGHSTVVTD 68
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G +F G GQLG G D LY P T G I ++ GW+ + +++S
Sbjct: 69 E-----GGLFVCGLNKDGQLGLGHTEDVLYFTPCTSLLG--CPIQQVACGWDFTIILTES 121
Query: 145 GCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G + +CG FGQLG HG R +V + + V +A G+RH+L + Q
Sbjct: 122 GQVLSCGSNLFGQLGVPHGPQRCVVP--QVIELLREEVVCVAAGLRHALAATASGIVFQ- 178
Query: 203 YGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+G G SG+R G + + P GL ++ + A D SA+L+ G LY W
Sbjct: 179 WGTGLASSGRRLCPGQTLPLFLTAKEPSRVTGLETSKVRCVLAGSDHSASLTDAGELYVW 238
Query: 260 GRG-------------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
G +V+C Q+ + +S GW H++ T G+V G +
Sbjct: 239 GSNKHGQLSAQAAFLPVPQKIEVHCFQNEKVTAVWS----GWTHLVAQTETGKVFTWGRA 294
Query: 307 HHGMLS---------DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENR 355
+G L E+ S+ P V S+L + +++ G+EH+ V
Sbjct: 295 DYGQLGRKLEAHEGWKQEKQESSLPCLKPRNSVPSSLHCLTGATEVSCGSEHNLAVM-GG 353
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+WGW EHG G G + P V + L V CG+G + A+ +
Sbjct: 354 VCYSWGWNEHGMCGDGTEANVWAPVPV----QALRSSVGLHVGCGAGHSLALCQ 403
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 161/342 (47%), Gaps = 44/342 (12%)
Query: 88 VIGGKVFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
V + +WG G GQLG G +V+AL P Y++ + +G +S
Sbjct: 2 VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEP----------YSVRSVVSGSRNSL 51
Query: 140 FVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ D G +FT G G LGH + ++ + P +V + N + Q A G H L + D
Sbjct: 52 AICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAV--DDQ 109
Query: 199 GNQVYGFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
G + Y +G + GQ G KD + R + +P+ + + ++A G S L+
Sbjct: 110 G-RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVAAGGTHSVVLT 166
Query: 252 AEGHLYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
EGH++TWG+ + ++ P + + A+G H L L DG +L G + +G
Sbjct: 167 REGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYG 226
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L + ++ P+ V LD + ++ IAAG HS +T+ + WG GEHG+LG
Sbjct: 227 QLGTGDTQPTSHPVPV-----QGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 370 LGNT--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
LG+ ++ P+ VNL E + ++V CG + A++R
Sbjct: 282 LGDNDKSSKMVPQKVNLLAE----EDIIQVSCGGTHSVALTR 319
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 164/401 (40%), Gaps = 55/401 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ ++ SV + G + LA+ G +F+WG
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICD-----DGTMFTWG 63
Query: 98 RGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + T I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHQPETKTENIPSRVKALANVKITQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE---GHVWTWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
Q D I+ +S+P GL ++ ++ + A + AL +G L WG G
Sbjct: 176 --QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALEEDGRLLAWGNNEYGQLGT 230
Query: 264 NSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--DPERVS 318
T + P Q L AA GW H LT GEV G HG L D ++ S
Sbjct: 231 GDTQPTSHPVPVQGLDDLTLVDIAAGGW-HSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P +KV+ L +IQ++ G HS +T + I ++G G+HG+LG G
Sbjct: 290 KMVP-----QKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQ 344
Query: 379 P-----KVVNLGDEFQNRDTQLE-------VFCGSGFTYAI 407
P K+ F + D + E + CG T AI
Sbjct: 345 PLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAI 385
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-------LSSLSSVSMLACGGAHVLALTSPSS 87
+ ++WG GQ G L DE+ + + +V +A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V++WG+ G++ P V + R I+ G H+ + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRL 217
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ +GQLG GD + S PV V + + IA G HS L +VYG+G
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ G+LG+ + S +PQ L + +I+ +S G S AL+ +G ++++GRG
Sbjct: 275 GEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ +WG GQLGTG P + L L+ V +A GG H ALT G+V
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVD-IAAGGWHSTALTDK-----GEV 269
Query: 94 FSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WGRG G+LG G+ + P+ V I +S G HS ++ G +F+ G
Sbjct: 270 YGWGRGEHGRLGLGDNDKSSKMVPQKVNLL--AEEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 152 DGTFGQLGHGDYRSHSSPVKVS--------SFVNKNVHQ--------IACGMRHSLVLLK 195
G G+LG+G + P+++ SF + + + IACG RH+L +++
Sbjct: 328 RGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 12/194 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG DGQLG GR+ S P+++ NLS + V + A G AH +AL+ + G
Sbjct: 172 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 225
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWGR GQLG G + P + D + + ++ G H+ ++ SG +FT GD
Sbjct: 226 VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQK--VEFLACGGCHTALLTKSGLVFTFGD 283
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH ++ P V+ V V QIACG +H+L + D +V+ FGSGK GQ
Sbjct: 284 GKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQ 341
Query: 213 LGVSKDRIRSVSLP 226
LG R + + P
Sbjct: 342 LGNGGTRNQLIPRP 355
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV + S S P++ L + +
Sbjct: 152 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 207
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
V ISA S ALS G++Y+WGR G T + P + + A G
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS- 348
H +LT G V G +G L + RP V+ L G +V QIA G +H+
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHTL 322
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
A V++ + ++G G+ GQLG G T +Q+ P+
Sbjct: 323 AYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+H + G H LVL D GK + S + R + L + I+
Sbjct: 113 KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 155
Query: 239 GISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGW 288
I+ S ALS G L+ WG R F STS ++L S + Q + G
Sbjct: 156 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 214
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H + L+ G V G + G L + P + LD KV +A G H+
Sbjct: 215 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCI-----EALDDQKVEFLACGGCHT 269
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYA 406
A++T++ + T+G G++GQLG +T +++ P++V +G NR TQ+ CG T A
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVG----NRVTQIA--CGRQHTLA 323
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 157/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT+
Sbjct: 1847 KVYACGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTA-----D 1900
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH + P+ + R I I+ G +HS ++ SG L+T
Sbjct: 1901 GKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRR--IRDIACGSSHSAALTSSGELYTW 1958
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V V V Q+ACG R +L L + L V+ +G G
Sbjct: 1959 GLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL---VFSWGDG 2015
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2016 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 2073
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 2074 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNR 2133
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 2134 KP-----TLVQGLEGQKITRVACGSSHSVAWT 2160
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 2883 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 2935
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 2936 GAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 2995
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L +D + V+ +G G G+LG + +P L + V + S AL+
Sbjct: 2996 LTED---DTVWSWGDGDYGKLG--RGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTK 3050
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3051 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3072
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3073 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 3121
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 3122 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 3153
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGGLY 2949
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + +++ +++ GDG
Sbjct: 2950 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGD 3009
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+KV + ++ CG + S+ L K VY +G G +LG
Sbjct: 3010 YGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3066
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3067 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 3110
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 145/383 (37%), Gaps = 75/383 (19%)
Query: 86 SSVIGGKVFSWGRGSSGQLG-----------HGEMVDAL--------------------- 113
++ I KVF WG QLG E + AL
Sbjct: 1789 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKV 1848
Query: 114 ---------------------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
P+ VT + + +G H+ ++ G +F+ G+
Sbjct: 1849 YACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGE 1908
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + ++ + IACG HS L ++Y +G G+ G+
Sbjct: 1909 GDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTS---SGELYTWGLGEYGR 1965
Query: 213 LGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
LG + + + +V +G H + V + ++ AL+ EG +++WG G
Sbjct: 1966 LGHGDNTTQLKPKMVKVLVG-HRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 2024
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N PQ++ + Q G L LT G V G + L V +P
Sbjct: 2025 SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP- 2083
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V L G K++ +A GA H VT+ + WG +HGQ G G T P +V
Sbjct: 2084 ----QVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2139
Query: 384 LGDEFQNRDTQLEVFCGSGFTYA 406
G E Q V CGS + A
Sbjct: 2140 -GLEGQK---ITRVACGSSHSVA 2158
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
VYG+G RGQLG V +++ + + L +++G G+++ A++A+G LY
Sbjct: 2790 VYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIG----GEQTLFAVTADGKLYAT 2845
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 2846 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2905
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 2906 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLG 2960
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 2961 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 2989
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 3105 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 3163
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 27/289 (9%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
G H LALT +V+SWG G G+LGHG+ P + G I + G
Sbjct: 524 GKHYLALTKDY-----EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGK--DIIDVECGG 576
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+S +S +G L+T G G +G+LGHG +P +S+ ++++ ++ACG ++ L
Sbjct: 577 TYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTL-- 634
Query: 196 DCLGNQ--VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
C+ +Q VY +G G G+LG + LP++ L +++IV + S ALS +
Sbjct: 635 -CITSQGKVYSWGDGDYGKLG--RGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 254 GHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
GH+YTWG+G + +V P+ + +LG +HVL LT GEV G
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGK 751
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ + + D + +P + L G KV+ + G S T++
Sbjct: 752 NENKQICDSSELFVQQP-----RLIEALKGQKVVGVCCGPAQSFAWTDD 795
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P L+ + + CGG + A+++ G ++
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA-----NGALY 589
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGRG+ G+LGHG D L P ++ + + H+ ++ G +++ GDG
Sbjct: 590 TWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGD 649
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P + N + Q+ CG + S+ L +D VY +G G+ +LG
Sbjct: 650 YGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED---GHVYTWGKGEGWKLG 706
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+ +V P++ L D ++VG+S AL+ +G +Y WG+ N
Sbjct: 707 HPTE--ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNEN 754
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 31/255 (12%)
Query: 150 CGDGT---FGQLGHGDYRSHSS----PVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGN 200
C D T Q G + +SS P ++++ +K V +IA +H L L KD
Sbjct: 478 CSDRTILILTQTGKVFFMYYSSDTQCPQEMTALDDKEVIKIAAHPEGKHYLALTKD---Y 534
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+VY +G+G G+LG + P + L +I+ + G SAA+SA G LYTWG
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEE--PTLIQALKGKDIIDVECGGTYSAAISANGALYTWG 592
Query: 261 RG------FNSTSDVNCPQSLPSSLS---FSQAALG--WNHVLVLTGDGEVLMLGGSHHG 309
RG + D P ++ S+LS + A G + H L +T G+V G +G
Sbjct: 593 RGNYGRLGHGTAEDCLTP-TMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYG 651
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L S P + EK+ N VK++Q+ GA+ S ++E+ + TWG GE +LG
Sbjct: 652 KLGRGGSDGSKLPRLI--EKLQN---VKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLG 706
Query: 370 LGNTCDQIHPKVVNL 384
+ P++V +
Sbjct: 707 HPTEENVRFPEMVEV 721
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 24/196 (12%)
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS-----SLS 280
PQ L ++ I I + L+ G ++ +SD CPQ + + +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----MYYSSDTQCPQEMTALDDKEVIK 517
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ G H L LT D EV G G L + + P + L G +I
Sbjct: 518 IAAHPEG-KHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEP-----TLIQALKGKDIID 571
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFC 399
+ G +SA ++ N A+ TWG G +G+LG G D + P +++ L DE ++V C
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEH-----IIKVAC 626
Query: 400 GSGFTYAISRHCLPSQ 415
GS + + + C+ SQ
Sbjct: 627 GSFYAHTL---CITSQ 639
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 175/408 (42%), Gaps = 58/408 (14%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNL--------SSLSSVSMLACGGAHVLALTSPSSVIG 90
WG G G+LG G L SP + LACGGAH L LT
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTES----- 91
Query: 91 GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+VF+ G GQLG G V +L P V+ FD + +SAG +HS V+ G LF
Sbjct: 92 GRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD---EKVVEVSAGNHHSCAVTADGKLFA 148
Query: 150 CGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G + GQLG G S+P KV + V +A G HS+ ++ +V +G+
Sbjct: 149 WGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE---GEVLSWGA 205
Query: 208 GKRGQLGVS-KDRIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+LG K I S+ P++ L ++I I+A SA + +G L+ +G
Sbjct: 206 AGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 265
Query: 261 ----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDP 314
+GF + D P + + A G H V+T G++ G + +G L
Sbjct: 266 QKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGT 325
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG----------- 363
+ V S L +L K V +++ G +H+AV++ I TWGWG
Sbjct: 326 DMVRSPEVLKSSLFK------FPVSKVSCGWKHTAVISGGD-IYTWGWGGANGTFFEEGH 378
Query: 364 -EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
GQLG GN D P +V EF + V CG T AI +
Sbjct: 379 SSGGQLGHGNDVDYFEPMMV----EFGKNARAVHVSCGFNHTGAIFEY 422
>gi|308799813|ref|XP_003074688.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116000858|emb|CAL50538.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 604
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 178/428 (41%), Gaps = 81/428 (18%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS------------LSSVSM 71
+ + E ++ + ++G G GQLG G + +P + + V
Sbjct: 153 VTDAEGDKVGTTIATFGRGFHGQLGLGSYDNHAAPAFVRMGDELARGHDSDDEHFEGVDS 212
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH--GEMVDALYPKPVTFFDGHRYTIT 129
+A GG+H +AL+ G V SWG SSG+LG+ ++ P+ V IT
Sbjct: 213 IALGGSHCVALSRD-----GGVISWGLASSGELGYTGNTPIEVNVPRRVFVGIDICTKIT 267
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
++ G NH+ + + G LF CG G GQLGHG +R + +V + +V CG H
Sbjct: 268 QVTTGSNHTMAIDEFGRLFACGRGRHGQLGHGTFRDAAPFSRVEALKGMHVVSAVCGGSH 327
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS-------VSLPQVTIGLHDIE--IVGI 240
S+ + D GN V+ +G + GQLG+ + V P + L+D++ + +
Sbjct: 328 SVCITSD--GN-VWAWGDCRYGQLGLGDLTFAAAAGWNNGVPWPCLVESLNDMDEPVASV 384
Query: 241 SANGDRSAALSAEGHLYTWGRG-----------------------------------FNS 265
SA G S ++A G ++ GRG F
Sbjct: 385 SAGGAHSIFVTAGGRMFVCGRGKHGALGVGKNPFLTIGPPTSACGNRLTPEAVNIHHFVR 444
Query: 266 TSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+D + Q+ S + AA G H LT G V G + +G L ++ S+
Sbjct: 445 RADGSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTTGENSYGQLGHGDKKST 504
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN----RAIMTWGWGEHGQLGLGNTCD 375
+V L G +VI +A+G H+ + EN ++ TWG G+ GQLG GN
Sbjct: 505 -----FVFTRVEALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGRGDWGQLGTGNMRS 559
Query: 376 QIHPKVVN 383
P+ V
Sbjct: 560 YTTPQEVK 567
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 50/242 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSS----VSMLACGGAHVLALT 83
VW+WG GQLG G L + P + SL+ V+ ++ GGAH + +T
Sbjct: 336 NVWAWGDCRYGQLGLGDLTFAAAAGWNNGVPWPCLVESLNDMDEPVASVSAGGAHSIFVT 395
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMV------------DALYPKPVTFFD--------- 122
+ GG++F GRG G LG G+ + L P+ V
Sbjct: 396 A-----GGRMFVCGRGKHGALGVGKNPFLTIGPPTSACGNRLTPEAVNIHHFVRRADGSV 450
Query: 123 ----------GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
G R + +AG HS ++ G +FT G+ ++GQLGHGD +S +V
Sbjct: 451 DQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTTGENSYGQLGHGDKKSTFVFTRV 510
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLG-NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
+ K V +A G H+ ++++ G N +Y +G G GQLG +RS + PQ G
Sbjct: 511 EALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGRGDWGQLGTGN--MRSYTTPQEVKG 568
Query: 232 LH 233
+
Sbjct: 569 FN 570
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQV----YGFGSGKRGQLGV-SKDRIRSVSLP 226
VS + ++ G H+ ++ D G++V FG G GQLG+ S D + +
Sbjct: 131 VSEQAERASANVSLGQFHTACVVTDAEGDKVGTTIATFGRGFHGQLGLGSYDNHAAPAFV 190
Query: 227 QVTIGL---HDIE------IVGISANGDRSAALSAEGHLYTWGR------GF--NSTSDV 269
++ L HD + + I+ G ALS +G + +WG G+ N+ +V
Sbjct: 191 RMGDELARGHDSDDEHFEGVDSIALGGSHCVALSRDGGVISWGLASSGELGYTGNTPIEV 250
Query: 270 NCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
N P+ + + +Q G NH + + G + G HG L T +
Sbjct: 251 NVPRRVFVGIDICTKITQVTTGSNHTMAIDEFGRLFACGRGRHGQLGH-----GTFRDAA 305
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+V L G+ V+ G HS +T + + WG +GQLGLG+
Sbjct: 306 PFSRVEALKGMHVVSAVCGGSHSVCITSDGNVWAWGDCRYGQLGLGD 352
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 163/350 (46%), Gaps = 40/350 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN----LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
++ WG G+ GQLG G+ P + +V ++ACG H L L G
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRD-----DG 56
Query: 92 KVFSWGRGSSGQLGH----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
V S G S GQLG G+ + P+ + + + + H+S G HS V + G +
Sbjct: 57 GVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQK--VVHVSCGKEHSLAVCNKGRV 114
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
++ G GTFGQLG G+ P +++ V Q+ACG HS+ L D +++ +G
Sbjct: 115 YSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTND---GRIFSWGQ 171
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
GQLG+ KD I S + PQ L I + ++A G S ALS G +Y WGR N+
Sbjct: 172 NIHGQLGLGKD-ISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGR--NNAH 228
Query: 268 DVNCPQSLPSSLSF---SQAAL----------GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+ Q+ P F S AAL G H VLT +G V G G L
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLG-- 286
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV-VTENRAIMTWGWG 363
R SS+ P +KV +DG V +A G+ H+ V ++ + ++++G G
Sbjct: 287 -RNSSSSP-KFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQLLSFGRG 333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 120/238 (50%), Gaps = 27/238 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWGAGT GQLGTG L D L P+ +N S V +ACG H +ALT+ G++F
Sbjct: 113 RVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTN-----DGRIF 167
Query: 95 SWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWG+ GQLG G+ + + P+ V+ DG + ++AG HS +S SG ++ G
Sbjct: 168 SWGQNIHGQLGLGKDISSQASPQQVSALDG--IPLAQVAAGGAHSFALSLSGVVYGWGRN 225
Query: 154 TFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
QLG + P +++ + +V ++CG H+ VL ++ VY FG
Sbjct: 226 NAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQN---GSVYTFGDDSA 282
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIE----IVGISANGDRS--AALSAEGHLYTWGRG 262
GQLG + S S P+ G +E V + A G +S G L ++GRG
Sbjct: 283 GQLGRN-----SSSSPK--FGPQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 27/249 (10%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVS----SFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
L+ G+G+ GQLG G S PV + ++ V +ACG RH+L+L D V
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDD---GGV 58
Query: 203 YGFGSGKRGQLG---VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
G RGQLG S RS P++ L ++V +S + S A+ +G +Y+W
Sbjct: 59 ASCGDNSRGQLGRRLPSGQEKRSYG-PELIQALETQKVVHVSCGKEHSLAVCNKGRVYSW 117
Query: 260 GRGF------NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G G D P+++ S Q A G +H + LT DG + G + HG L
Sbjct: 118 GAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQL 177
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +SS + ++VS LDG+ + Q+AAG HS ++ + + WG QLGL
Sbjct: 178 GLGKDISS----QASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLS 233
Query: 372 NTCDQIHPK 380
Q PK
Sbjct: 234 ----QAKPK 238
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS-TRPLSVALEKVSNLD 334
P+ + A G H L+L DG V G + G L R+ S S E + L+
Sbjct: 34 PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLG--RRLPSGQEKRSYGPELIQALE 91
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
KV+ ++ G EHS V + +WG G GQLG G D++ PK +N +++
Sbjct: 92 TQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYK----V 147
Query: 395 LEVFCGSGFTYAIS 408
++V CG + A++
Sbjct: 148 IQVACGHDHSIALT 161
>gi|363734309|ref|XP_421009.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Gallus gallus]
Length = 394
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 174/400 (43%), Gaps = 47/400 (11%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
GA + GQLG G D L PQLL S + +A GG H +T G++F G
Sbjct: 3 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITG-----AGELFVCG 57
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+GQLG D L T G + + ++ GW+ + + +G + +CG FGQ
Sbjct: 58 HNKAGQLGLNHTEDVLCFTLCTALSG--FCVQEVACGWDFTIILGRAGLVLSCGSNAFGQ 115
Query: 158 LGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
LG P K+ + + IA G+RH+L + L V+ +G+G KR
Sbjct: 116 LGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGL---VFQWGTGMASRAKRV 172
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSD 268
G + + P GL D+++ ++A +L+ EGHLY WG G + +
Sbjct: 173 HQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYHCVSLTGEGHLYVWGSNKHGQLVSKE 232
Query: 269 VNC--PQSLPSSLSFSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
V P+ + + FS + GW H++ T G+V G + +G L V +
Sbjct: 233 VFLVEPKKIDTQF-FSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAVVPDGQ 291
Query: 322 PLSVALEK-----------VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
A E+ + L+G QIA G+EH+ V + ++WGW EHG G
Sbjct: 292 ETCTASEQPVKLFCNIPISLPCLNGAS--QIACGSEHNLAVVGD-CCLSWGWNEHGMCGD 348
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G + PK V + Q+ + CG+G + A+ ++
Sbjct: 349 GTEANVHVPKPV----KALGYAKQILIGCGAGHSLALCQN 384
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 20/114 (17%)
Query: 35 KVWSWGAGTDGQLGT------GRLHDELSPQ--------LLNLSSLSSVSMLACGGAHVL 80
KV++WG GQLG G+ S Q ++L L+ S +ACG H L
Sbjct: 269 KVFTWGRADYGQLGRHAVVPDGQETCTASEQPVKLFCNIPISLPCLNGASQIACGSEHNL 328
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
A V+G SWG G G G + PKPV + + AG
Sbjct: 329 A------VVGDCCLSWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAG 376
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 156/359 (43%), Gaps = 35/359 (9%)
Query: 39 WGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG DGQLG G + P++ ++ S + +ACGG H L L G V++ G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQ-----DGSVYTCG 58
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLGH + ++ P+ V D + IT +S G HS V++ G +F G G GQ
Sbjct: 59 SNSCGQLGHDKAGNS--PELVGALDTQK--ITMVSCGRAHSVAVNEQGQVFVWGAGDGGQ 114
Query: 158 LGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
LG + + V++ + K ++ Q+ CG +H + L +D Q++ +G GQL
Sbjct: 115 LG---LETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRD---GQLFTWGQNSSGQL 168
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+ K +S P L I + I+A GD ALS G ++ WG+ G N
Sbjct: 169 GLGKGETSKLS-PSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQ 227
Query: 268 D--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D V C S + G H LT G + G G L + P
Sbjct: 228 DRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLP--- 284
Query: 326 ALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QI G H+ A V + + +G HGQLG G D P V
Sbjct: 285 --RRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPHPVK 341
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 23/300 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG GQLG G + ++ P+ F G + ++ G H+ F+ G ++TCG
Sbjct: 1 MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGR--GLKEVACGGQHTLFLLQDGSVYTCG 58
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLGH ++ +SP V + + + ++CG HS+ + + QV+ +G+G G
Sbjct: 59 SNSCGQLGHD--KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQ---GQVFVWGAGDGG 113
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GF 263
QLG+ +V +P++ L D I + ALS +G L+TWG+ G
Sbjct: 114 QLGLETAET-AVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK 172
Query: 264 NSTSDVN-CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
TS ++ P + + +Q G +H L+ G V G + G L ++ P
Sbjct: 173 GETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP 232
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ L +V+ I+ G EH+A +T++ + T+G G GQLG G++ +++ P+ V
Sbjct: 233 CHIKF-----LRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRV 287
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG + GQLG G+ +LSP + + ++ + GG H AL+ + G V
Sbjct: 156 QLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALS-----LSGAV 210
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ +GQLG + D P + F R + +IS G H+ ++ SG LFT GDG
Sbjct: 211 FGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQR--VVYISCGDEHTAALTKSGGLFTFGDG 268
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGHG + P +V + V QI CG H+L + VY FG GQL
Sbjct: 269 SRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPS--SGTVYAFGCNSHGQL 326
Query: 214 G 214
G
Sbjct: 327 G 327
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WGAG GQLG + P+LL S+S + CG H +AL+ G++
Sbjct: 103 QVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSR-----DGQL 157
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG+ SSGQLG G+ L P PV G + I+AG +H +S SG +F G
Sbjct: 158 FTWGQNSSGQLGLGKGETSKLSPSPVKSLAG--IPLAQITAGGDHCFALSLSGAVFGWGK 215
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG D + + P + ++ V I+CG H+ L K ++ FG G RGQ
Sbjct: 216 NKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTK---SGGLFTFGDGSRGQ 272
Query: 213 L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG 260
L G S + + LP+ + L E+ I+ + A + G +Y +G
Sbjct: 273 LGHGSSNNEL----LPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G G+ GQLG G ++EL P+ + + VS + CG H LA PSS G V++
Sbjct: 262 LFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFV-PSS---GTVYA 317
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G S GQLG G + D P PV
Sbjct: 318 FGCNSHGQLGTGILADLRSPHPV 340
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ A G H L L DG V G + G L + +S E V LD K+
Sbjct: 35 LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSP-------ELVGALDTQKITM 87
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGL--GNTCDQIHPKVVNLGDEFQNRDTQLEVF 398
++ G HS V E + WG G+ GQLGL T +I + L D + +V
Sbjct: 88 VSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDH-----SISQVV 142
Query: 399 CGSGFTYAISR 409
CG+ A+SR
Sbjct: 143 CGNQHCIALSR 153
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 174/405 (42%), Gaps = 58/405 (14%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNL--------SSLSSVSMLACGGAHVLALTSPSSVIG 90
WG G G+LG G L SP + LACGGAH L LT
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTES----- 91
Query: 91 GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+VF+ G GQLG G V +L P V+ FD + +SAG +HS V+ G LF
Sbjct: 92 GRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD---EKVVEVSAGNHHSCAVTADGKLFA 148
Query: 150 CGDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G + GQLG G S+P KV + V +A G HS+ ++ +V +G+
Sbjct: 149 WGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEE---GEVLSWGA 205
Query: 208 GKRGQLGVS-KDRIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
G+LG K I S+ P++ L ++I I+A SA + +G L+ +G
Sbjct: 206 AGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 265
Query: 261 ----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDP 314
+GF + D P + + A G H V+T G++ G + +G L
Sbjct: 266 QKTEKGFGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGT 325
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG----------- 363
+ V S L +L K V +++ G +H+AV++ I TWGWG
Sbjct: 326 DMVRSPEVLKSSLFK------FPVSKVSCGWKHTAVISGGD-IYTWGWGGANGTFFEEGH 378
Query: 364 -EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLG GN D P +V EF + V CG T AI
Sbjct: 379 SSGGQLGHGNDVDYFEPMMV----EFGKNARAVHVSCGFNHTGAI 419
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 155/352 (44%), Gaps = 37/352 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WGA GQLG G D +P + L++V+ + G H L L G +++
Sbjct: 330 VFAWGANGSGQLGDGDTTDRATPG--PVPGLNAVASVVGGAQHALVLRKD-----GTLWA 382
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G SGQLGHG + P PV G +T ++ G HS G ++ G T+
Sbjct: 383 WGGGLSGQLGHGGSERHVVPAPVMRLAG----VTSMATGSFHSLAALGDGSVWAWGRNTY 438
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG G + V+V V +A HSL + D V+ +G GQLG
Sbjct: 439 GQLGDGSTAERHAAVRVEGL--GGVRSVASAAHHSLAVGMD---GTVWAWGRNAAGQLGD 493
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ DR R V++P +T + ++A G AL ++G ++ WG G +T
Sbjct: 494 GTTLDRARPVAVPGLT------SVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTV 547
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
D P + + A G + L DG V G G L D V P+ V
Sbjct: 548 DRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRV-- 605
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
E ++N + ++AAG+ H+ V + + WG GQLG G+ D+ P
Sbjct: 606 EGLAN-----ITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRP 652
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 155/359 (43%), Gaps = 43/359 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G D L+P + +S L +V +A G +AL S G V+
Sbjct: 529 SVWAWGYNALGQLGDGTTVDRLTP--VRVSGLGAVVAVAAGSYFSMALQSD-----GTVW 581
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G GQLG G V L P V IT ++AG H+ V G ++ GD
Sbjct: 582 TWGEGFEGQLGDGGGVQRLSPVRVEGL----ANITRVAAGSAHALAVRGDGTVWAWGDNG 637
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
GQLG G + PV+V + + ++ G HS+ L D V +G GQL
Sbjct: 638 EGQLGDGSWADRFRPVQVPGL--QGITAVSGGRSHSMALQGD---GTVRAWGYNGYGQLG 692
Query: 214 -GVSKDRIRSVSLPQVT--IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G R+R +P +T LH + AL A+G L WG G
Sbjct: 693 DGTLTSRVRPALIPGLTGIQALHPSHL--------HVLALHADGTLRGWGYNRFGQLGLG 744
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ P + + ++G H L++ DG V+ G + G L D T P+S
Sbjct: 745 AAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVS 804
Query: 325 VALEKVSNLDGVKVIQ-IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V GV ++ +A+G +HS + + + WG GQLG G T ++ P +V
Sbjct: 805 V--------PGVPCVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLV 855
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 167/380 (43%), Gaps = 47/380 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+ GQLG G LSP + +S LS ++ + G H LAL G V++WG
Sbjct: 232 AWGSNGSGQLGDGTSTQRLSP--VKVSELSGITEVRAGTYHALALGKD-----GGVWTWG 284
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+SGQLG G D P V + + + S S + D+G +F G GQ
Sbjct: 285 SNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDS----DSLALLDTGAVFAWGANGSGQ 340
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG GD ++P V V + G +H+LVL KD ++ +G G GQLG
Sbjct: 341 LGDGDTTDRATPGPVPGL--NAVASVVGGAQHALVLRKD---GTLWAWGGGLSGQLGHGG 395
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
V P + + + ++ S A +G ++ WGR G ST++ +
Sbjct: 396 SERHVVPAPVMRL----AGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHA 451
Query: 272 P---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ L S + AA +H L + DG V G + G L D + RP VA+
Sbjct: 452 AVRVEGLGGVRSVASAA---HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARP--VAVP 506
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDE 387
+++ V +AAG H + + ++ WG+ GQLG G T D++ P +V LG
Sbjct: 507 GLTS-----VTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGLG-- 559
Query: 388 FQNRDTQLEVFCGSGFTYAI 407
+ V GS F+ A+
Sbjct: 560 -----AVVAVAAGSYFSMAL 574
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 140/349 (40%), Gaps = 70/349 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA GQLG G ++P L+ L V LA GG +AL + G V+S
Sbjct: 830 VWAWGANARGQLGDGTTTPRVTPGLVE--GLRGVVALAAGGDASVALRAD-----GSVWS 882
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +SGQLG G + D P V H ++ G H+ V + G L+ G
Sbjct: 883 WGGNASGQLGDGTLTDRALPAHVE----HLSNAVAVAVGETHALAVGEDGALWAWGANGS 938
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V + V +A G S+ + D + +G+ GQLG
Sbjct: 939 GQLGDGGTAPSLTPVRVKGL--ERVASVAAGRAFSVAVRDD---GTAWAWGTNPSGQLGD 993
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
+ RSV P L I A+SA H
Sbjct: 994 GTNHARSV--PNQVTSLKGIR------------AMSAGAH-------------------- 1019
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
HV+ L+ DG V G + G L D S+ P + +V L G
Sbjct: 1020 --------------HVVALSADGTVWTWGDNTLGQLGD----GSSSPTGMWPRQVPELRG 1061
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V+ + AAG + + V + WG E+GQLG G T Q+ P V +
Sbjct: 1062 VEAV--AAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKI 1108
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 159/385 (41%), Gaps = 46/385 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+WG+ GQLG G+ +L+P + + V + G H + S G V
Sbjct: 1083 AWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSD-----GTVQ 1137
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G P V ++ +S+G HS + G ++ G
Sbjct: 1138 TWGDNTFGQLGDGTTTRRAVPLTVYGL----ASVVAVSSGAWHSLALLSDGTVWAWGANG 1193
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G + PV+V+ +V I G H+L + D V+ +G GQLG
Sbjct: 1194 FGQLGDGTSTPRTRPVQVAGL--GDVVAIGSGGYHALAVCSD---GSVWTWGYNAFGQLG 1248
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR--------GFNS 265
RS LP GL + V A GD S AL ++G L WG G +
Sbjct: 1249 DGTAESRS--LPTRVEGLEGVVAV---AGGDHYSLALHSDGTLSAWGNNASGQLGDGTGT 1303
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
T + +A G H + L GDG V G + G L D S TR + +
Sbjct: 1304 TRYSRVAVKGVDGVVDVRA--GATHTVALRGDGTVWTWGDNAFGQLGD--GASGTR-MRL 1358
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
V NL V + AGA H+ V + TWG HGQLGLG+ ++ P +V L
Sbjct: 1359 VPRPVPNLSSVSAV--GAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVREL 1416
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISR 409
D V G+ F+ A+ R
Sbjct: 1417 SDV-------TVVSGGADFSLAMKR 1434
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 147/355 (41%), Gaps = 35/355 (9%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG T GQLG G P L + L+SV ++ G H LAL S G V++WG
Sbjct: 1138 TWGDNTFGQLGDGTTTRRAVP--LTVYGLASVVAVSSGAWHSLALLSD-----GTVWAWG 1190
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G P V + I +G H+ V G ++T G FGQ
Sbjct: 1191 ANGFGQLGDGTSTPRTRPVQVAGLG----DVVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G S S P +V + V +A G +SL L D + +G+ GQLG
Sbjct: 1247 LGDGTAESRSLPTRVEGL--EGVVAVAGGDHYSLALHSD---GTLSAWGNNASGQLGDGT 1301
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDV 269
R + + G + + AL +G ++TWG G + T
Sbjct: 1302 GTTRYSRVAVKGVDGVVDVRAGAT----HTVALRGDGTVWTWGDNAFGQLGDGASGTRMR 1357
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P+ +P+ S S G H + G V G + HG L + + T PL +
Sbjct: 1358 LVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL-----R 1412
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V L V V+ + GA+ S + + +++WG +G LGLG T + P V L
Sbjct: 1413 VRELSDVTVV--SGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQVAL 1465
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 163/428 (38%), Gaps = 89/428 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG G +GQLG G LSP + + L++++ +A G AH LA+ G V++
Sbjct: 580 VWTWGEGFEGQLGDGGGVQRLSP--VRVEGLANITRVAAGSAHALAVRGD-----GTVWA 632
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G D P V G IT +S G +HS + G + G +
Sbjct: 633 WGDNGEGQLGDGSWADRFRPVQVPGLQG----ITAVSGGRSHSMALQGDGTVRAWGYNGY 688
Query: 156 GQLGHGDYRSHSSPVKVSSFVN-------------------------------------- 177
GQLG G S P +
Sbjct: 689 GQLGDGTLTSRVRPALIPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGW 748
Query: 178 ----------KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSL 225
V +++ G H+L++ D V +G GQLG S R VS+
Sbjct: 749 SAVPVQVRGIGRVDRLSVGRAHTLMVRAD---GTVMAWGENGSGQLGDGTSTHRTGPVSV 805
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL 279
P V + +++ S AL+ +G ++ WG G +T+ P +
Sbjct: 806 PGVPC------VRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLR 859
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
A G + + L DG V GG+ G L D + R L +E +SN +
Sbjct: 860 GVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTL--TDRALPAHVEHLSN-----AV 912
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399
+A G H+ V E+ A+ WG GQLG G T + P V + + V
Sbjct: 913 AVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRV------KGLERVASVAA 966
Query: 400 GSGFTYAI 407
G F+ A+
Sbjct: 967 GRAFSVAV 974
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 145/335 (43%), Gaps = 37/335 (11%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
L+P + L++L ++ + G AH LAL + G V++WG SSGQLG G D P
Sbjct: 100 LAP--VRLAALENIVSVVSGDAHSLALGAD-----GSVWTWGGNSSGQLGDGTTTDRATP 152
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
V D ++ ++AG HS + + G ++ G GQLG G + +P +V
Sbjct: 153 MRVAGLD----SVVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGL 208
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLH 233
V +A G +L +L+D V +GS GQL G S R+ V + +++
Sbjct: 209 --NGVVALAAGFDFTLAVLED---GTVRAWGSNGSGQLGDGTSTQRLSPVKVSELS---- 259
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
I + A + AL +G ++TWG G + +D P +P A
Sbjct: 260 --GITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASM 317
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+ L L G V G + G L D + P V L+ V + GA+H
Sbjct: 318 DSDSLALLDTGAVFAWGANGSGQLGDGDTTDRATP-----GPVPGLN--AVASVVGGAQH 370
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V+ ++ + WG G GQLG G + + P V
Sbjct: 371 ALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPAPV 405
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 141/319 (44%), Gaps = 34/319 (10%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITH 130
+A G H L L SP GG V++WG SGQLG E + L P + + I
Sbjct: 63 IAAGTQHSLYL-SP----GGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALE----NIVS 113
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ +G HS + G ++T G + GQLG G ++P++V+ +V +A G HS
Sbjct: 114 VVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGL--DSVVAVAAGDFHS 171
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L +D V+ +G+ GQLG + + P+ GL+ +V ++A D + A+
Sbjct: 172 LALRED---GTVWAWGTNFHGQLG--RGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAV 224
Query: 251 SAEGHLYTWG-RGFNSTSDVNCPQSL-PSSLS----FSQAALGWNHVLVLTGDGEVLMLG 304
+G + WG G D Q L P +S ++ G H L L DG V G
Sbjct: 225 LEDGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWG 284
Query: 305 GSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ G L D P+ V LE+V +A+ S + + A+ WG
Sbjct: 285 SNASGQLGDGTWNDRAVPMQVPGLERVK--------AVASMDSDSLALLDTGAVFAWGAN 336
Query: 364 EHGQLGLGNTCDQIHPKVV 382
GQLG G+T D+ P V
Sbjct: 337 GSGQLGDGDTTDRATPGPV 355
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
+IA G +HSL L G V+ +G GQLG ++ ++ ++ P L +I V +
Sbjct: 62 RIAAGTQHSLYL---SPGGDVWAWGGNGSGQLGGAETSLQGLA-PVRLAALENI--VSVV 115
Query: 242 ANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
+ S AL A+G ++TWG G +T+D P + S A G H L L
Sbjct: 116 SGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDSVVAVAAGDFHSLALR 175
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
DG V G + HG L P E+V L+GV + +AAG + + V E+
Sbjct: 176 EDGTVWAWGTNFHGQLGRGHTQPGLTP-----EQVPGLNGV--VALAAGFDFTLAVLEDG 228
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ WG GQLG G + ++ P V+
Sbjct: 229 TVRAWGSNGSGQLGDGTSTQRLSPVKVS 256
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 143/302 (47%), Gaps = 20/302 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
K+++ G GT+G+LG G ++ +P+ S V +A GG H LALT+ GK
Sbjct: 3110 KLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTA-----DGK 3164
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LGHG + P+ + G R + I+ G HS V+ G L+T G
Sbjct: 3165 VYSWGEGEDGKLGHGNRITLEAPRLIESLAGER--VISIACGSAHSACVTARGHLYTWGL 3222
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LGHGD P V + N V Q+ACG R + L G +V+ +G G G+
Sbjct: 3223 GEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACG-KVFSWGDGDFGK 3281
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--FNSTSDVN 270
LG + ++P L+ + + + S AL+ +G ++TWG+G F +
Sbjct: 3282 LG--RGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCD 3339
Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P+ + A+G H L +T + +V G + HG + + RP
Sbjct: 3340 AHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVNRRPAL 3399
Query: 325 VA 326
VA
Sbjct: 3400 VA 3401
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 160/360 (44%), Gaps = 29/360 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQL-LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV+ WG QLG + P LS+L V + GG+ L + S GK+
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHI--AGGSKTLFIVSHD----GKL 3111
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+ G G++G+LG G + P+ + + +G H+ ++ G +++ G+G
Sbjct: 3112 FACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEG 3171
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + +P + S + V IACG HS + +Y +G G+ G+L
Sbjct: 3172 EDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTAR---GHLYTWGLGEYGRL 3228
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTWG--------RG 262
G D I+ V P++ L + ++ + A G R A AL+A G +++WG RG
Sbjct: 3229 GHGDDNIQLV--PKMVEALANYRVIQV-ACGSRDAQTLALTACGKVFSWGDGDFGKLGRG 3285
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + +SL +Q G L LT DGEV G + L RP
Sbjct: 3286 GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRP 3345
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L G +VI +A GA H VT + WG +HGQ G G TC P +V
Sbjct: 3346 -----TLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVNRRPALV 3400
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+L+ S V +ACGGAH LT+ G+++
Sbjct: 4058 EVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTA-----RGRIY 4112
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V R +G + ++D +++ GDG
Sbjct: 4113 TWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGD 4172
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+++ V ++ CG + S+ L C VY +G G +LG
Sbjct: 4173 YGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVAL---CQCGSVYTWGKGDYHRLG 4229
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S + +R P G+ IV I+ A + G +YTWG
Sbjct: 4230 HGSYEHVRR---PMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWG 4273
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 127/284 (44%), Gaps = 25/284 (8%)
Query: 58 PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
P LL ++ +AC GG H LAL++ G+V+SWG G G+LGHG V P
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSA-----DGEVYSWGEGEDGKLGHGNRVSYDRP 4081
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
K +T G + I+ G HS ++ G ++T G G +G+LGHGD P V +
Sbjct: 4082 KLITALSG--LEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEAL 4139
Query: 176 VNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
+ V +ACG +L + D + V+ +G G G+LG + LP L
Sbjct: 4140 SSFRVIDVACGSGDAQTLCITDD---DNVWSWGDGDYGKLG--RGGSEGCKLPMRIDCLK 4194
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAA 285
+ ++ + S AL G +YTWG+G S V P + A
Sbjct: 4195 GLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIA 4254
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVALE 328
G H + T GEV G + G L D +++ RP L +AL+
Sbjct: 4255 TGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLLMALQ 4298
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 120/276 (43%), Gaps = 51/276 (18%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WSWG G DG+LG G +PQ L+ + V +A G A +TS G +++W
Sbjct: 547 WSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITS-----RGALYTW 601
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG-DGTF 155
GRG+ G+LGHG + + L P+PV+F + I ++ GW G C +G
Sbjct: 602 GRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGE-------GSTLCCTWEGAV 654
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G G+ +P +S+ V ++ G H L D G QVY +G G +LG
Sbjct: 655 QVFGEGEA---GTPRALSALAMFRVTRVYTG-EHWHAALTD--GGQVYTWGKGDGYRLG- 707
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------------- 260
+ S +P++ L I+IV +S ALS+EG L+ WG
Sbjct: 708 -HGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNPVPQPV 766
Query: 261 RGFNSTSDVN---------------CPQSLPSSLSF 281
+ FN + N P+ LPSSL F
Sbjct: 767 KAFNPSFKANGVSSGPTQIFAWSEENPRDLPSSLPF 802
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 199 GNQVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHL 256
G VYG+G RGQLG V ++R+ + L+ +++VG G+++ A++ +G +
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVG----GEQTLFAVTPDGKV 4005
Query: 257 YTWGRGFNSTSDVNCPQSL--PSSLSFSQAAL--------GWNHVLVLTGDGEVLMLGGS 306
Y G G + S+ P+ L+ Q G H L L+ DGEV G
Sbjct: 4006 YATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEG 4065
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L RVS RP + ++ L G++V+ IA G HSA +T I TWG G +G
Sbjct: 4066 EDGKLGHGNRVSYDRP-----KLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYG 4120
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
+LG G++ DQ+ PK+V F+ ++V CGSG
Sbjct: 4121 RLGHGDSEDQLIPKLVEALSSFR----VIDVACGSG 4152
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 32/299 (10%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V+ WG GQLG E P P + G V+ G ++
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAA--LNPVQLVGGEQTLFAVTPDGKVYA 4007
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGS 207
G G G+LG G S S P ++S + + ++AC G +H L L D +VY +G
Sbjct: 4008 TGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSAD---GEVYSWGE 4064
Query: 208 GKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
G+ G+LG VS DR P++ L +E+V I+ G SA L+A G +YTWG+
Sbjct: 4065 GEDGKLGHGNRVSYDR------PKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGR 4118
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G + D P+ + + SF + G L +T D V G +G L
Sbjct: 4119 YGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4178
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P+ ++ L G++VI++ G++ S + + ++ TWG G++ +LG G+
Sbjct: 4179 GGSEGCKLPM-----RIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGS 4232
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 160/360 (44%), Gaps = 31/360 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WG GQLG +P + L++L+ V ++ GG L +P GKV+
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLV--GGEQTLFAVTPD----GKVY 4006
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G + P + T ++G H +S G +++ G+G
Sbjct: 4007 ATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGE 4066
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
G+LGHG+ S+ P +++ V IACG HS L ++Y +G G+ G+L
Sbjct: 4067 DGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTAR---GRIYTWGKGRYGRLG 4123
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTW--------GRG 262
G S+D++ +P++ L ++ ++ +GD ++ ++ + ++++W GRG
Sbjct: 4124 HGDSEDQL----IPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4179
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + L + G + L G V G + L RP
Sbjct: 4180 GSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRP 4239
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +V+ + G ++ IA G+ H T+ + TWG + GQLG G T P+++
Sbjct: 4240 M-----RVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLL 4294
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L DC +V+ +G + QLG K V +P + L + V I+ +S
Sbjct: 3052 LPNDC--PKVFVWGLNDKDQLGGVKGS--KVKVPVFSPALSALRPVHIAGGSKTLFIVSH 3107
Query: 253 EGHLYTWGRGFNS------TSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLM 302
+G L+ G G N +++V+ P++ P S + + A+ G H L LT DG+V
Sbjct: 3108 DGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYS 3167
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L R++ P + +L G +VI IA G+ HSA VT + TWG
Sbjct: 3168 WGEGEDGKLGHGNRITLEAP-----RLIESLAGERVISIACGSAHSACVTARGHLYTWGL 3222
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
GE+G+LG G+ Q+ PK+V ++ ++V CGS
Sbjct: 3223 GEYGRLGHGDDNIQLVPKMVEALANYR----VIQVACGS 3257
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 95/231 (41%), Gaps = 37/231 (16%)
Query: 168 SPVKVSSFVNKNVHQIACGMRHSL---VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
+P V +K + Q++C HSL L + G + +G G+ G+LG R
Sbjct: 513 TPHLVPGLESKTITQVSC---HSLGRHYLCRSSCGG-AWSWGIGEDGRLGHGDTAARDAP 568
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNCPQSLPSSLS 280
P + H E+V ++A SA +++ G LYTWGRG + NC P S +
Sbjct: 569 QPLHHLAHH--EVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFN 626
Query: 281 ------FSQAALGWNH--VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
ALGW L T +G V + G G + R LS
Sbjct: 627 AHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAG---------TPRALSA------- 670
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
L +V ++ G A +T+ + TWG G+ +LG GN PK+V
Sbjct: 671 LAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVE 721
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 23/250 (9%)
Query: 127 TITHISAGWNHSGFVSDSGC--LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
TIT +S ++ S C ++ G G G+LGHGD + +P + + V ++A
Sbjct: 524 TITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVA 583
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIE-IVGISA 242
G+ S V+ +Y +G G +G+LG I + PQ V+ H+IE I+ ++
Sbjct: 584 AGLACSAVITSR---GALYTWGRGAQGRLG--HGTIENCLTPQPVSFNAHNIERIIDVAL 638
Query: 243 NGDRSAALSA--EGHLYTWGRGFNSTSDVNCPQSLPSSLSF--SQAALGWNHVLVLTGDG 298
+ L EG + +G G T P++L + F ++ G + LT G
Sbjct: 639 GWGEGSTLCCTWEGAVQVFGEGEAGT-----PRALSALAMFRVTRVYTGEHWHAALTDGG 693
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+V G L S+ P + V L G+K++ ++ GA H ++ +
Sbjct: 694 QVYTWGKGDGYRLGHGNMESTKIP-----KLVEALQGIKIVDLSLGASHGIALSSEGVLF 748
Query: 359 TWGWGEHGQL 368
WG E Q+
Sbjct: 749 VWGTHERTQI 758
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 48/180 (26%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-----NLSSLSSVSM-------LAC---GGAHV- 79
+++WG G G+LG G + + L+PQ + N+ + V++ L C G V
Sbjct: 598 LYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVF 657
Query: 80 -------------LALTSPSSVI-----------GGKVFSWGRGSSGQLGHGEMVDALYP 115
LA+ + V GG+V++WG+G +LGHG M P
Sbjct: 658 GEGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIP 717
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
K V G + I +S G +H +S G LF G Q+ S+ P V +F
Sbjct: 718 KLVEALQGIK--IVDLSLGASHGIALSSEGVLFVWGTHERTQI------SNPVPQPVKAF 769
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 396
+V+++AAG SAV+T A+ TWG G G+LG G + + P+ V+ R +
Sbjct: 578 EVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVA 637
Query: 397 VFCGSGFTYAIS 408
+ G G T +
Sbjct: 638 LGWGEGSTLCCT 649
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q V++WG G +LG G P + + +A G H +A T G
Sbjct: 4213 QCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTD-----TG 4267
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPK 116
+V++WG GQLG G + A P+
Sbjct: 4268 EVYTWGDNDEGQLGDGTTLAAQRPR 4292
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 145/307 (47%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 523 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 577
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 578 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 637
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 638 MLVAGLKGLKVIDVACGSGDAQTLAVTDNG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 694
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 695 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 754
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV T+P AL LD ++ I
Sbjct: 755 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRV--TKPEPAAL---PGLDTKHIVGI 809
Query: 342 AAGAEHS 348
A G S
Sbjct: 810 ACGPAQS 816
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 558 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 612
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+D+G +++
Sbjct: 613 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSW 672
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 673 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 729
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 730 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 777
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 471 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 519
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 520 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 575
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 576 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 634
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VT+N + +WG G++G+LG G +
Sbjct: 635 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCK 689
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 690 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 717
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 526 APQLVQGLASRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLG-HGDTV-PLEE 580
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 581 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 640
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 641 AGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 698
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 699 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 747
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 157/352 (44%), Gaps = 37/352 (10%)
Query: 28 EEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
+ + Q VK +W WG GQLG G D +P + + S + L+ G H LA+
Sbjct: 482 QYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAP--VQVGGDSDWTSLSVGREHTLAVK 539
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+ G ++ WG+ +GQLG G+ D P+ V G +SAG ++ V D
Sbjct: 540 AD-----GTLWGWGQNYNGQLGLGDTDDRKTPERV----GSDSDWATVSAGTGYTLAVKD 590
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G L+ G + GQLG GD + +PV+V+S + + ++ G RH+L + D ++
Sbjct: 591 DGTLWAWGRNSHGQLGLGDTNNRDAPVQVAS--DNDWAAVSAGSRHTLAVKND---GTLW 645
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
+G GQLG+ R V P+ +G D + +S + A+ +G L+ WGR
Sbjct: 646 AWGRNSDGQLGLGDTDNRDV--PE-QVG-SDTDWAAVSTGSGHTLAVKTDGTLWAWGRNS 701
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G T + + P+ + ++ GW H L + DG + G + +G L +
Sbjct: 702 DGQLGLGDTDERHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTD 761
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ V + +AAG H+ V ++ + WG GQLG
Sbjct: 762 GRHAPMQVGSDS-------DWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLG 806
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 31/328 (9%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
++ +LA GG H LA+ + G +++WG+ + GQLG G+ P V G
Sbjct: 123 TAFPVLAAGGVHTLAMKAD-----GTLWAWGQNNVGQLGLGDTEKRDTPAQV----GSDT 173
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+SAG ++ V D G L+ G+ FGQLG GD +P +V S + + ++ G
Sbjct: 174 DWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGS--DSDWVAVSAG 231
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H+L L D ++ +G GQLG+ R+ P+ +G H + G+
Sbjct: 232 RHHTLALKAD---GTLWAWGRNYFGQLGLGGTTNRNA--PE-QVGSHS-DWAGVIGGDRH 284
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
S A+ +G L++WG+ G T + P+ + + ++ + G H L + DG +
Sbjct: 285 SLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTL 344
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
GG+ G L + + P+ V + + AG +S V + ++ +W
Sbjct: 345 WAWGGNGFGQLGLGDTDNRDAPVQVGSDN-------DWAALNAGQRYSLAVKNDGSLWSW 397
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEF 388
GW + G+LGLG+T D+ P+ V G E+
Sbjct: 398 GWNDFGELGLGDTDDRHAPEQVGGGMEW 425
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 169/380 (44%), Gaps = 43/380 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G + +P+ + S S + + G H LA+ G ++S
Sbjct: 244 LWAWGRNYFGQLGLGGTTNRNAPE--QVGSHSDWAGVIGGDRHSLAVRED-----GTLWS 296
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ + GQLG G+ V+ P+ V G+ +SAG H+ V + G L+ G F
Sbjct: 297 WGQNNVGQLGLGDTVERRRPEQV----GNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGF 352
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD + +PV+V S + + + G R+SL + D ++ +G G+LG+
Sbjct: 353 GQLGLGDTDNRDAPVQVGS--DNDWAALNAGQRYSLAVKND---GSLWSWGWNDFGELGL 407
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R QV G+ E ++A + + A+G L WGR G +
Sbjct: 408 GDTDDRHAP-EQVGGGM---EWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYI 463
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + ++ A+ G + DG + G +H G L + P+ V +
Sbjct: 464 TSPLQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDS 523
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH--GQLGLGNTCDQIHPKVVNLGDE 387
++ G EH+ V + + WGWG++ GQLGLG+T D+ P+ V +
Sbjct: 524 -------DWTSLSVGREHTLAVKADGTL--WGWGQNYNGQLGLGDTDDRKTPERVGSDSD 574
Query: 388 FQNRDTQLEVFCGSGFTYAI 407
+ V G+G+T A+
Sbjct: 575 WAT------VSAGTGYTLAV 588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 150/353 (42%), Gaps = 33/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G D +P+ + S S ++ G H LAL + G +++
Sbjct: 194 LWAWGENYFGQLGLGDTDDRHAPE--QVGSDSDWVAVSAGRHHTLALKAD-----GTLWA 246
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR GQLG G + P+ V G + G HS V + G L++ G
Sbjct: 247 WGRNYFGQLGLGGTTNRNAPEQV----GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNV 302
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P +V + + + ++ G+ H+L + D ++ +G GQLG+
Sbjct: 303 GQLGLGDTVERRRPEQVGN--DSDWATVSAGLLHTLAVKND---GTLWAWGGNGFGQLGL 357
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
R V +G D + ++A S A+ +G L++WG G T D
Sbjct: 358 GDTDNRDAP---VQVG-SDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDR 413
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P+ + + ++ G H L + DG + G + G L V T PL E
Sbjct: 414 HAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTE- 472
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+AG + V + ++ WG GQLGLG+T D+ P V
Sbjct: 473 ------ADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQV 519
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 164/378 (43%), Gaps = 39/378 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G + +P + + S + + L G + LA+ + G ++S
Sbjct: 344 LWAWGGNGFGQLGLGDTDNRDAP--VQVGSDNDWAALNAGQRYSLAVKND-----GSLWS 396
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G+LG G+ D P+ V G ++AG H+ V G L G F
Sbjct: 397 WGWNDFGELGLGDTDDRHAPEQV----GGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDF 452
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G +SP++ + + + G + + D ++G+G GQLG+
Sbjct: 453 GELGLGVMVYITSPLQ--TVTEADWAAASAGQYQTQAVKAD---GSLWGWGRNHSGQLGL 507
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
R V +G D + +S + + A+ A+G L+ WG+ +N T D
Sbjct: 508 GDTDDRHAP---VQVG-GDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDR 563
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P+ + S ++ + G + L + DG + G + HG L + + P+ VA +
Sbjct: 564 KTPERVGSDSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDN 623
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
++AG+ H+ V + + WG GQLGLG+T ++ P+ V ++
Sbjct: 624 -------DWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPEQVGSDTDW- 675
Query: 390 NRDTQLEVFCGSGFTYAI 407
V GSG T A+
Sbjct: 676 -----AAVSTGSGHTLAV 688
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 153/354 (43%), Gaps = 35/354 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+WSWG G+LG G D +P+ + + + G H L + + G + +
Sbjct: 394 LWSWGWNDFGELGLGDTDDRHAPE--QVGGGMEWAAVTAGMYHTLGVKAD-----GTLRA 446
Query: 96 WGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR G+LG G MV P + VT D SAG + V G L+ G
Sbjct: 447 WGRNDFGELGLGVMVYITSPLQTVTEAD-----WAAASAGQYQTQAVKADGSLWGWGRNH 501
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG GD +PV+V + + ++ G H+L + D ++G+G GQLG
Sbjct: 502 SGQLGLGDTDDRHAPVQVGG--DSDWTSLSVGREHTLAVKAD---GTLWGWGQNYNGQLG 556
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ R P+ +G D + +SA + A+ +G L+ WGR G T++
Sbjct: 557 LGDTDDRKT--PE-RVG-SDSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNN 612
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P + S ++ + G H L + DG + G + G L + T V +
Sbjct: 613 RDAPVQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLG----LGDTDNRDVPEQ 668
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
S+ D V + G+ H+ V + + WG GQLGLG+T ++ P+ V
Sbjct: 669 VGSDTDWAAV---STGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQV 719
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 143/351 (40%), Gaps = 33/351 (9%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG G+LG G + SP L +V+ A + + G ++ WG
Sbjct: 446 AWGRNDFGELGLGVMVYITSP-------LQTVTEADWAAASAGQYQTQAVKADGSLWGWG 498
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
R SGQLG G+ D P V G T +S G H+ V G L+ G GQ
Sbjct: 499 RNHSGQLGLGDTDDRHAPVQV----GGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQ 554
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG GD +P +V S + + ++ G ++L + D ++ +G GQLG+
Sbjct: 555 LGLGDTDDRKTPERVGS--DSDWATVSAGTGYTLAVKDD---GTLWAWGRNSHGQLGLGD 609
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
R + + D + +SA + A+ +G L+ WGR G T + +
Sbjct: 610 TNNRDAPVQVAS----DNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDV 665
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P+ + S ++ + G H L + DG + G + G L + P V +
Sbjct: 666 PEQVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGGDS-- 723
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ AG +H+ + + + WG +GQLGLG+T + P V
Sbjct: 724 -----DWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGRHAPMQV 769
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 33/342 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G +P + S + + ++ GGA+ LA+ G +++
Sbjct: 144 LWAWGQNNVGQLGLGDTEKRDTP--AQVGSDTDWAAVSAGGAYTLAVKDD-----GTLWA 196
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G+ D P+ V G +SAG +H+ + G L+ G F
Sbjct: 197 WGENYFGQLGLGDTDDRHAPEQV----GSDSDWVAVSAGRHHTLALKADGTLWAWGRNYF 252
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + ++P +V S + + + G RHSL + +D ++ +G GQLG+
Sbjct: 253 GQLGLGGTTNRNAPEQVGS--HSDWAGVIGGDRHSLAVRED---GTLWSWGQNNVGQLGL 307
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
D + QV +D + +SA + A+ +G L+ WG G T +
Sbjct: 308 G-DTVERRRPEQVG---NDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNR 363
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P + S ++ G + L + DG + G + G L + P E+
Sbjct: 364 DAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAP-----EQ 418
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
V G++ + AG H+ V + + WG + G+LGLG
Sbjct: 419 VGG--GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLG 458
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG +DGQLG G + +P+ + S + + G H LA+ + G ++
Sbjct: 694 LWAWGRNSDGQLGLGDTDERHAPE--QVGGDSDWAAVTAGWQHTLAIKND-----GTLWG 746
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G+ P V G ++AG H+ V D G L G F
Sbjct: 747 WGLNLYGQLGLGDTDGRHAPMQV----GSDSDWATVAAGRYHTLAVKDDGTLRAWGRNRF 802
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLG YR P +V +
Sbjct: 803 GQLGQRTYR-FDQPQEVPGW 821
>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 162/380 (42%), Gaps = 60/380 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G D PQL+ ++++V +ACG H A++ I ++F
Sbjct: 284 EVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAVS-----ISDELF 338
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
SWG G + G LGHG V PK + +G + I+ G HS + +G LFT G
Sbjct: 339 SWGDGKYNVGLLGHGTDVSHWVPKRINGPLEG--LQVISIACGTWHSALATSNGKLFTFG 396
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHG+ S + P +V +ACG+ H+ +++ F SG
Sbjct: 397 DGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVE-------VTFQSG--- 446
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS-DVN 270
S R +G Y G G T
Sbjct: 447 -----------------------------SNVSSRKLFTWGDGDKYRLGHGNKETYLQPT 477
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
C +L +F Q A G + LT G + +GG+ G L + S + +
Sbjct: 478 CVSTL-IEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLGN-----SLSDGKIPILVQ 531
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L G V +I+ GA H A +T + TWG G +G+LG G+ D+ P +V E
Sbjct: 532 DALVGEFVEEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHV 591
Query: 391 RDTQLEVFCGSGFTYAISRH 410
++ + CGS FT I H
Sbjct: 592 KN----ISCGSSFTSCICIH 607
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 138/343 (40%), Gaps = 90/343 (26%)
Query: 91 GKVFSWGR---GSSGQLGHG----EMVDALYPKPV---TFFDGHRYTITHISAGWNHSGF 140
G V+ WG + G+G D L PKP+ D H+ I++G H
Sbjct: 224 GDVYIWGEVWADAVAPDGNGTQFPSTTDVLVPKPLESSVVLDVHQ-----IASGVRHMAL 278
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
V+ G +FT G+ + G+LGHG + P V NV +ACG H+ + + +
Sbjct: 279 VTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVESVACGENHTCAV---SISD 335
Query: 201 QVYGFGSGKR--GQLGVSKDRIRSVS--LPQVTIG-LHDIEIVGISANGDRSAALSAEGH 255
+++ +G GK G LG D VS +P+ G L ++++ I+ SA ++ G
Sbjct: 336 ELFSWGDGKYNVGLLGHGTD----VSHWVPKRINGPLEGLQVISIACGTWHSALATSNGK 391
Query: 256 LYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
L+T+ GDG +LG HG
Sbjct: 392 LFTF------------------------------------GDGTFGVLG---HG-----N 407
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGWGEH 365
R S P V L L G+K I +A G H+A + E +R + TWG G+
Sbjct: 408 RESVAYPKEVQL-----LSGLKTITVACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDK 462
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+LG GN + P V+ E+ ++ CG T A++
Sbjct: 463 YRLGHGNKETYLQPTCVSTLIEYNFH----QIACGHTMTIALT 501
>gi|325192607|emb|CCA27034.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 362
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 172/397 (43%), Gaps = 74/397 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE-----------LSPQLLNLSSLSSVSMLACGGAHVLALT 83
K+++WG+ QLG G + L+P N + +V +ACG + +A+T
Sbjct: 13 KLFAWGSNDHHQLGIGTMMQSSGSDRVQRTNILAPCAANW-VVRNVVAVACGWQNTIAIT 71
Query: 84 SPSSVIGG-------KVFSWGRGSSGQLGHG-EMVDALYPKPVT-FFDGHRYTITHISAG 134
P ++ G KVF WG GQLG E +D P + + Y + +S G
Sbjct: 72 GPVNLTEGTQSSHEHKVFCWGSNKFGQLGTASEGIDVHCPTAINIYLLAQPYRVQSVSCG 131
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVL 193
W HS V+ +G F G G G+LG G HS +P ++ + Q+ CG +HS+ +
Sbjct: 132 WKHSLLVTATGEAFAWGTGRHGELGLGTSILHSVNPTRI--LTRQMFQQVHCGWQHSVFV 189
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
D +V GS K GQLG + D + + P++ E+
Sbjct: 190 SFD---GKVSSCGSNKHGQLG-TNDSLAPLYSPRLITTTESDEV---------------- 229
Query: 254 GHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
S+ Q ++GW+H + +T EVL G HG L
Sbjct: 230 -----------------------KSIVVKQISVGWHHCVCITLGNEVLSWGKGSHGQLGI 266
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ P S+ ++ + + + Q+A G+EH+ ++T + ++ + GWGEHG LG G T
Sbjct: 267 GLDDGAYTPTSILIDPIKHR---AISQVACGSEHTLLLTHDGSVYSCGWGEHGNLGHGTT 323
Query: 374 CDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISR 409
++ P + FQ++ +E V G + AI+R
Sbjct: 324 TNEDIPSEILY---FQDQQLAVESVRAGGAVSIAIAR 357
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 134/265 (50%), Gaps = 34/265 (12%)
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
F+ ++ T I G N + ++D+G +++ G ++G+LGH S P +S+F NK
Sbjct: 202 LFNQKEHSPTTIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQ 261
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
+ QIACG HSL L D +G VY +G+G G+LG+ + VS+P++ D +I
Sbjct: 262 ITQIACGKDHSLAL--DEIG-VVYAWGNGSGGRLGLGNSEV--VSIPKIIPHFEDEKITS 316
Query: 240 ISANGDRSAALSAEGHLYTWGRGF--NSTSDV------NCPQSLPSSLSFSQAALGWNHV 291
I+ + S ALS G +++WG+G N DV + P+ +P SQ + G H
Sbjct: 317 IACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQISCGNWHS 376
Query: 292 LVLTGDGEVLMLGGS------HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+VL+ G+V G + H G S P V G K+ +I AGA
Sbjct: 377 MVLSKSGDVYTFGSNIDCRLGHSGNGSTPTMVQI---------------GSKIKKIGAGA 421
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGL 370
+AV++E+ AI TWG H QLG+
Sbjct: 422 NFNAVLSESNAIYTWGSNIHCQLGV 446
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 149/335 (44%), Gaps = 49/335 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG + G+LG +D P +++ ++ +ACG H LAL G V++
Sbjct: 229 VYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLALDEI-----GVVYA 283
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GS G+LG G PK + F+ + IT I+ G S +SDSG +F+ G G
Sbjct: 284 WGNGSGGRLGLGNSEVVSIPKIIPHFEDEK--ITSIACGQEFSLALSDSGKVFSWGKGLH 341
Query: 156 GQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G LG+ S S+P + QI+CG HS+VL K VY FGS +L
Sbjct: 342 GNLGYDVSTMLSQSTPKVIPML--PPASQISCGNWHSMVLSK---SGDVYTFGSNIDCRL 396
Query: 214 GVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC- 271
G S + S P V IG +I I A + +A LS +YTWG S+++C
Sbjct: 397 GHSGNG----STPTMVQIG---SKIKKIGAGANFNAVLSESNAIYTWG------SNIHCQ 443
Query: 272 --------------PQSLPSSLSF--SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
PQ + + L + S +G+ HV+VLT GEV G + E
Sbjct: 444 LGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVGE 503
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ +V D V +IAAG S +
Sbjct: 504 AIKEV----CNFTRVKIPDNSTVFKIAAGGNSSLI 534
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 22/226 (9%)
Query: 35 KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
KV+SWG G G LG + + +P+++ + L S ++CG H + L+ G
Sbjct: 332 KVFSWGKGLHGNLGYDVSTMLSQSTPKVIPM--LPPASQISCGNWHSMVLSK-----SGD 384
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+++G +LGH + P V G + I I AG N + +S+S ++T G
Sbjct: 385 VYTFGSNIDCRLGHSG--NGSTPTMVQI--GSK--IKKIGAGANFNAVLSESNAIYTWGS 438
Query: 153 GTFGQLG--HGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
QLG D+R+++ P V + + + I G H +VL +V+ FG
Sbjct: 439 NIHCQLGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTD---TGEVFTFGDNS 495
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
Q GV + + +V I + + I+A G+ S + GH
Sbjct: 496 MMQCGVGEAIKEVCNFTRVKIP-DNSTVFKIAAGGNSSLISLSSGH 540
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%)
Query: 256 LYTWGRGFNSTSDVNCPQ-SL-----PSSLSFSQA-------ALGWNHVLVLTGDGEVLM 302
+Y WG+ CP SL P+ + F+Q G N ++LT G V
Sbjct: 179 IYQWGQML-------CPSLSLIATGTPTGVLFNQKEHSPTTIKFGQNFAVMLTDTGGVYS 231
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G +G L P + + P +S ++ QIA G +HS + E + WG
Sbjct: 232 WGLCSYGKLGHPTKNDISIP-----SMISAFKNKQITQIACGKDHSLALDEIGVVYAWGN 286
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G G+LGLGN+ PK++ F++ + CG F+ A+S
Sbjct: 287 GSGGRLGLGNSEVVSIPKII---PHFEDEKIT-SIACGQEFSLALS 328
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G G + PQ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNQPEQIGALADQH---IIHVACGESHSLALSDQGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 30/332 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG S GQ G G + + +P ++ ++ G +H F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGL 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G GQ
Sbjct: 61 NTKGQLGHE--REGNQPEQIGALADQHIIHVACGESHSLALSDQ---GQLFSWGAGSDGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG+ SV++P++ L+ I+ +S AL+ +G +TWG+ NS +
Sbjct: 116 LGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGK--NSHGQLGLG 172
Query: 273 QSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 173 KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 233 PCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRR 287
Query: 382 V--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 288 VLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVN 177
GQLG G H+ VK S V
Sbjct: 324 RGQLGTG----HTCNVKCPSPVK 342
>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
Length = 1996
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG H+ +T G+VF+W + G+LGHG VD PK V F I +
Sbjct: 1207 IACGVRHIALVTRQ-----GEVFTWEEEAGGRLGHGIQVDVCRPKLVEFL--ALTNIDFV 1259
Query: 132 SAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMR 188
+ G H+ VS SG LFT GDG G LGHG SH P +VS V V +ACG
Sbjct: 1260 ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTW 1319
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ---VTIGLHDIEI-------V 238
HS + + +++ FG G G LG DR SVS P+ + GL +++ V
Sbjct: 1320 HSALATAN---GKLFTFGDGAFGVLG-HGDR-ESVSYPKEVKMLSGLKTLKVACGVWHTV 1374
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS------FSQAALGWNH 290
I +++ ++ L+TWG G + ++ LP+ +S F+Q A G
Sbjct: 1375 AIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTF 1434
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT G V +GG+ HG L SS + L G V +I+ G H AV
Sbjct: 1435 TVALTTSGHVFTMGGTSHGQLG-----SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAV 1489
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR------DTQLEVFCGSGFT 404
+T + TWG G +G+LG G+ D+ P +V E + D + C F
Sbjct: 1490 LTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGADQSVCSGCRQAFG 1549
Query: 405 YAISRH 410
+ RH
Sbjct: 1550 FTRKRH 1555
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 32/333 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++W G+LG G D P+L+ +L+++ +ACG H A+++ G +F
Sbjct: 1222 EVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVST-----SGDLF 1276
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G + G LGHG + PK V+ +G + ++ G HS + +G LFT G
Sbjct: 1277 TWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG--LQVLSVACGTWHSALATANGKLFTFG 1334
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGNQVYG 204
DG FG LGHGD S S P +V ++ACG+ H++ +++ +++
Sbjct: 1335 DGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFT 1394
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW----- 259
+G G + +LG + LP L D I+ + AL+ GH++T
Sbjct: 1395 WGDGDKNRLGHGNK--ETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSH 1452
Query: 260 GRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G+ +S SD P + L + + G +HV VLT EV G +G L ++
Sbjct: 1453 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK 1512
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
P V L V I+ GA+ S
Sbjct: 1513 DDRKTPTLVEA-----LRERHVKSISCGADQSV 1540
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L P ++ + + +ACG +ALT+ G VF
Sbjct: 1391 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTT-----SGHVF 1445
Query: 95 SWGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ G S GQLG G++ + + V F + IS G +H ++ +FT
Sbjct: 1446 TMGGTSHGQLGSSNSDGKLPCLVQDRLVGEF------VEEISCGDHHVAVLTSRSEVFTW 1499
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG-NQVYGF 205
G G+ G+LGHGD +P V + ++V I+CG S+ C G Q +GF
Sbjct: 1500 GKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGADQSV-----CSGCRQAFGF 1550
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 12/194 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WG DGQLG GR+ S P+++ NLS + V + A G AH +AL+ + G
Sbjct: 142 ELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA-GEAHSMALS-----MSGN 195
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWGR GQLG G + P + D + + ++ G H+ ++ SG +FT GD
Sbjct: 196 VYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQK--VEFLACGGCHTALLTKSGLVFTFGD 253
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH ++ P V+ V V QIACG +H+L + D +V+ FGSGK GQ
Sbjct: 254 GKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDT--GKVFSFGSGKEGQ 311
Query: 213 LGVSKDRIRSVSLP 226
LG R + + P
Sbjct: 312 LGNGGTRNQLIPRP 325
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 18/212 (8%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV + S S P++ L + +
Sbjct: 122 KNIIQITCGDYHSLALSK---GGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL 177
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWN 289
V ISA S ALS G++Y+WGR G T + + P + + A G
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGC 237
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS- 348
H +LT G V G +G L + RP V+ L G +V QIA G +H+
Sbjct: 238 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRP-----RLVTGLVGNRVTQIACGRQHTL 292
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
A V++ + ++G G+ GQLG G T +Q+ P+
Sbjct: 293 AYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 324
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+H + G H LVL D GK + S + R + L + I+
Sbjct: 83 KIHSMDQGEEHMLVLSSD-----------GKPFEYKYSIEHARFQCI------LQEKNII 125
Query: 239 GISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGW 288
I+ S ALS G L+ WG R F STS ++L S + Q + G
Sbjct: 126 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENL-SGVPLVQISAGE 184
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H + L+ G V G + G L + P + LD KV +A G H+
Sbjct: 185 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCI-----ETLDDQKVEFLACGGCHT 239
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTYA 406
A++T++ + T+G G++GQLG +T +++ P++V +G NR TQ+ CG T A
Sbjct: 240 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVG----NRVTQIA--CGRQHTLA 293
>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
Length = 2434
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 175/398 (43%), Gaps = 31/398 (7%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
+EE+ +VWS G + G+LG G S + + + + G H +ALT
Sbjct: 427 DEEEGDREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALT---- 482
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
+ GKV + G +GQ G G + + + + H G H+ V+ G
Sbjct: 483 -VDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRA 541
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL-KDCLGNQ-VYGF 205
TCG GQLGHG+ S S P V S N+ V ++C H+++ +D G Q +Y F
Sbjct: 542 ATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G GQLG + R V PQ + D +V ++ + ++A G + +G+
Sbjct: 602 GRNDYGQLGHNDSIDRKV--PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYG 659
Query: 262 --GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPE 315
G +S + P + + L + G+ H +VL + G + +G L
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719
Query: 316 RVSSTRPLSVALEKVS------NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
SST L + ++ S L+G +++ A G H+ V++N + +G HGQLG
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG 779
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
G+T ++++P + D+F + L +GF + +
Sbjct: 780 TGDTNERVYPFPI---DDFVGKRVAL---VAAGFYHTV 811
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K +++G GQLG + ++L P Q+ + CG H + L S G +
Sbjct: 649 KAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCS-----GAHL 703
Query: 94 FSWGRGSSGQLGHG------------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
F++GR GQLG G + Y + + +G I + G H+ V
Sbjct: 704 FAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGK--DIVRFACGCYHTVAV 761
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
SD+G ++ G GQLG GD P + FV K V +A G H++VL
Sbjct: 762 SDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVL 813
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
EE+ QQ + +++G GQLG D PQ + V +ACG H + +T+
Sbjct: 589 EEDGSGQQYL--YTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTA 646
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
GK F++G+ GQLG M + L P V ++ I G+ H+ +
Sbjct: 647 -----TGKAFAFGKNDYGQLGIDSMENQLVPVQVR-AGLEKHECLEIRCGYYHTIVLCSG 700
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSS------------PVKVSSFVNKNVHQIACGMRHSLV 192
LF G +GQLG G + S+ + K++ + ACG H++
Sbjct: 701 AHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVA 760
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
+ + + +Y FG GQLG R P
Sbjct: 761 VSDNGV---MYVFGRNNHGQLGTGDTNERVYPFP 791
>gi|256075111|ref|XP_002573864.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
mansoni]
gi|360044963|emb|CCD82511.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
mansoni]
Length = 414
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 169/417 (40%), Gaps = 71/417 (17%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WGA + GQLGTG D P+++N + V++++ GG H L +FS G
Sbjct: 3 TWGANSHGQLGTGDDKDAYEPKIINFTD--PVALISGGGGHSLISNE------NNIFSCG 54
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLG + P +F T+ +S GW+ S V G +F+ G +GQ
Sbjct: 55 LNSVGQLGRSNDCNHFKIIPFSFAP----TVHKVSCGWDFSVAVLSDGSVFSWGSNEYGQ 110
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG S PV++ + V I+ G+RH ++ + +++G+GS +R QL V K
Sbjct: 111 LGKESINSSIVPVRIDI---EPVRSISAGLRH---VVSVTISGKLFGWGSNRRKQLFVDK 164
Query: 218 --------DRIRSVSLPQVTIG--LHDI-EIVGISANGDRSAALSAEGHLYTWG--RGFN 264
D + + + L D E V +A S A + L +G R F
Sbjct: 165 VLNKAEHYDESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRTNKLALFGDTRFFK 224
Query: 265 STSDV-----NCPQSLPSSLSFS----------QAALGWNHVLVLTGDGEVLMLGGSHHG 309
S+V N L S + + Q GW+HVLV T GEV G S G
Sbjct: 225 LKSEVHDLSLNTESRLSSPIWYDAELFGNNKVEQVVCGWSHVLVRTSVGEVYSWGRSDFG 284
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDG--------------VKVIQIAAGAEHSAVVTENR 355
L + S + + + E N D V V IA G+EHS + N
Sbjct: 285 QLGRTVNILS-KFIGKSNEIFPNFDAYPGKVHFHLNDGHEVTVKTIACGSEHSLAIDSNG 343
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
+ WGW EHG G+ + + + TQ EV Y IS C
Sbjct: 344 QLWVWGWNEHGMCGV----------ITKTASQIEQHGTQEEVIPYITQPYRISFRCF 390
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 134/308 (43%), Gaps = 52/308 (16%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ +WG S GQLG G+ DA PK + F D + IS G HS +S+ +F+CG
Sbjct: 1 MLTWGANSHGQLGTGDDKDAYEPKIINFTD----PVALISGGGGHS-LISNENNIFSCGL 55
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG + +H + S VH+++CG S+ +L D V+ +GS + GQ
Sbjct: 56 NSVGQLGRSNDCNHFKIIPFS--FAPTVHKVSCGWDFSVAVLSD---GSVFSWGSNEYGQ 110
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIV-GISANGDRSAALSAEGHLYTWGRG--------- 262
LG K+ I S +P V I DIE V ISA +++ G L+ WG
Sbjct: 111 LG--KESINSSIVP-VRI---DIEPVRSISAGLRHVVSVTISGKLFGWGSNRRKQLFVDK 164
Query: 263 -------FNSTSDVNCPQSLPSSL-------------SFSQAALGWNHVLVLTGDGEVLM 302
++ + + +L +S+ ++ A + L L GD
Sbjct: 165 VLNKAEHYDESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRTNKLALFGDTRFFK 224
Query: 303 LGGSHHGM-LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
L H + L+ R+SS P+ E N KV Q+ G H V T + +WG
Sbjct: 225 LKSEVHDLSLNTESRLSS--PIWYDAELFGN---NKVEQVVCGWSHVLVRTSVGEVYSWG 279
Query: 362 WGEHGQLG 369
+ GQLG
Sbjct: 280 RSDFGQLG 287
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 59/267 (22%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG+ GQLG ++ + P +++ + S+S G HV+++T I GK+F
Sbjct: 100 VFSWGSNEYGQLGKESINSSIVPVRIDIEPVRSIS---AGLRHVVSVT-----ISGKLFG 151
Query: 96 WGRGSSGQLGHGEMVD-----------ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
WG QL ++++ P + G + +AG HS + +
Sbjct: 152 WGSNRRKQLFVDKVLNKAEHYDESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRT 211
Query: 145 GCLFTCGDGTFGQLGH-------GDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLK 195
L GD F +L SSP+ + F N V Q+ CG H VL++
Sbjct: 212 NKLALFGDTRFFKLKSEVHDLSLNTESRLSSPIWYDAELFGNNKVEQVVCGWSH--VLVR 269
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL----------------------H 233
+G +VY +G GQLG R+V++ IG H
Sbjct: 270 TSVG-EVYSWGRSDFGQLG------RTVNILSKFIGKSNEIFPNFDAYPGKVHFHLNDGH 322
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWG 260
++ + I+ + S A+ + G L+ WG
Sbjct: 323 EVTVKTIACGSEHSLAIDSNGQLWVWG 349
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 175/384 (45%), Gaps = 33/384 (8%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG QLG + +L Q LS L + + GG+ L + S GK+
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHI--AGGSKSLFIVSHE----GKL 2109
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G++G+LG G + YP+P+ F + + +G H+ ++ G +F+ G+G
Sbjct: 2110 YACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG 2169
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + P + + +K + IACG HS + ++Y +G G+ G+L
Sbjct: 2170 EDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 2226
Query: 214 GVSKDRIRSVSLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG-FNS----- 265
G D I + P++ L H I V + ++ AL+ EG +++WG G F
Sbjct: 2227 G-HGDNITQLK-PKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG 2284
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ N P ++ ++L Q G L LT GEV G + L +P
Sbjct: 2285 SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPT 2344
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +L KVI +A GA H VT+ + WG +HGQ G G T P +V+
Sbjct: 2345 V-----IESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVH 2399
Query: 384 -LGDEFQNRDTQLEVFCGSGFTYA 406
L D NR V CGS + A
Sbjct: 2400 GLEDVHINR-----VACGSSHSIA 2418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 27/292 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL++ V+SWG G G+LGHG + PK + G Y I I+ G
Sbjct: 3126 GGKHCLALSA-----DNDVYSWGEGDDGKLGHGNRLACETPKLIEALQG--YEIIDIACG 3178
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L+T G G +G+LGHGD P + V V +ACG +L
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLC 3238
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P+ L + ++ + S AL+
Sbjct: 3239 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR 3293
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G + V P+ + + A G H + + +GEV G
Sbjct: 3294 SGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 3353
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ G L D + RP VS L G K+ +A G+ H+ + N A
Sbjct: 3354 DNDEGQLGDDTTNAIQRP-----RLVSALQGKKITNVACGSAHTLAWSTNNA 3400
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 12/226 (5%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+SWG G DG+LG G RL E +P+L+ + +ACGGAH A+TS G+++
Sbjct: 3139 VYSWGEGDDGKLGHGNRLACE-TPKLIEALQGYEIIDIACGGAHSAAITS-----TGQLY 3192
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK + G++ +G + ++D +++ GDG
Sbjct: 3193 TWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGD 3252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 3309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
V P+ L +I+ I+ A S EG ++TWG
Sbjct: 3310 HGTG--EHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWG 3353
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 23/256 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G G+LG G D+L P+L+ V +ACG A L +T +
Sbjct: 3190 QLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN----- 3244
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+SWG G G+LG G PK + G + + G S ++ SG ++T G
Sbjct: 3245 VWSWGDGDYGKLGRGGSDGCKVPKKIESLAG--LGVIKVECGSQFSVALTRSGSVYTWGK 3302
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G + +LGHG P KV++ K + IA G H + + +V+ +G GQ
Sbjct: 3303 GDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDE---GEVFTWGDNDEGQ 3359
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG D ++ P++ L +I ++ H W S++ P
Sbjct: 3360 LG--DDTTNAIQRPRLVSALQGKKITNVAC---------GSAHTLAWSTNNASSACARLP 3408
Query: 273 QSLPSSLSFSQAALGW 288
P Q W
Sbjct: 3409 PVAPLEYDLLQDIPTW 3424
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 32/308 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G ++
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRP--VQLVGGEQTLFAVTADGKVYAT 3088
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S P + S + + +IA G +H L L D N VY +G G
Sbjct: 3089 GYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD---NDVYSWGEG 3145
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
G+LG +R+ + P++ L EI+ I+ G SAA+++ G LYTWG+ G
Sbjct: 3146 DDGKLG-HGNRL-ACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLG 3203
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----SDP 314
+ D P+ + + + + G L +T D V G +G L SD
Sbjct: 3204 HGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3263
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+V +K+ +L G+ VI++ G++ S +T + ++ TWG G++ +LG G
Sbjct: 3264 CKVP---------KKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGE 3314
Query: 375 DQIHPKVV 382
PK V
Sbjct: 3315 HVRRPKKV 3322
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 39/388 (10%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ WG GQLG ++ LS+L V ++ G + A+T+ GKV+
Sbjct: 3033 IYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVG-GEQTLFAVTA-----DGKVY 3086
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G G+ G+LG G L P + +++G H +S +++ G+G
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LGHG+ + +P + + + IACG HS + Q+Y +G G+ G+LG
Sbjct: 3147 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITS---TGQLYTWGKGRYGRLG 3203
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGRG------FN 264
S+D+++ P++ L +++ ++ +GD ++ ++ + ++++WG G
Sbjct: 3204 HGDSEDQLK----PKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 3259
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ P+ + S L + G + LT G V G + L RP
Sbjct: 3260 GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRP 3319
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+KV+ L G K+I IA G+ H ++ + TWG + GQLG T P++V
Sbjct: 3320 -----KKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQRPRLV 3374
Query: 383 NL--GDEFQNRDTQLEVFCGSGFTYAIS 408
+ G + N V CGS T A S
Sbjct: 3375 SALQGKKITN------VACGSAHTLAWS 3396
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 167/361 (46%), Gaps = 31/361 (8%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG G GQL +GRL L P L SS S + CG + G V
Sbjct: 3408 EAYTWGGGRHGQLAESGRL--VLQPTLT--SSFSKAKQIHCGHNSTFVIEH-----DGTV 3458
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGD 152
+ G GS G+LG G D +P+T G T S G HS ++++G +F+ GD
Sbjct: 3459 LACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGD 3518
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LGHG+ P ++ + ++V +ACG +HS ++ D +++ FG+ G+
Sbjct: 3519 GDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVD---GKLFTFGASDLGR 3575
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWGRG------FNS 265
LG+ + LP L I + I+ + + ++ + ++T+G G
Sbjct: 3576 LGLGNTSNKK--LPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGR 3633
Query: 266 TSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH-HGMLSDPERVSSTRP 322
T+ PQ + S L+ + G L LT +G+V G + +G+ + + P
Sbjct: 3634 TTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYP 3693
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++V L + IAAG EH+ +T+ + +WG GQLGLG T Q P ++
Sbjct: 3694 -----QQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLI 3748
Query: 383 N 383
+
Sbjct: 3749 S 3749
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 157/350 (44%), Gaps = 32/350 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGA---HVLALTSPSSVIG 90
V + G G+ G+LG G D+L P+L +++L V+ LA H LALT
Sbjct: 3458 VLACGEGSYGRLGQGN-SDDL-PRLRPITALQGFVVTELATSTGLEGHSLALTE-----T 3510
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+VFSWG G G+LGHG P+ + G + H++ G HS V+ G LFT
Sbjct: 3511 GEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGE--DVLHVACGHKHSAIVTVDGKLFTF 3568
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+LG G+ + P +V++ V IACG H++V+ D V+ FG G+
Sbjct: 3569 GASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTD--RESVWTFGEGEY 3626
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDV 269
GQLG+ R + PQ + I I + AL+ EG +Y+ G N +V
Sbjct: 3627 GQLGLG--RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEV 3684
Query: 270 NC------PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ PQ + S A G+ H L LT +G+V G G L + +
Sbjct: 3685 DTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQRE 3744
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
P +S+L G + QI+AG HSA T A + L LG
Sbjct: 3745 PC-----LISSLQGKGIRQISAGHNHSAAWTVAPASIRKAMATSSSLELG 3789
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 147/331 (44%), Gaps = 29/331 (8%)
Query: 42 GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG---GAHVLALTSPSSVIGGKVFSWGR 98
G G+LG G ++ P+L+ + L H LA+ S G+++SWG
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIAS-----DGRIYSWGD 495
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
G G+LGHG V PK + + I+ G+ HS ++ G L+T GDG +G+L
Sbjct: 496 GDYGKLGHGNHVTQKSPK-LILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRL 554
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
GHGD S S P V V ++CG ++V+ +D V+ FG+G G+LG D
Sbjct: 555 GHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQD--ATTVWSFGAGDNGKLG-HGD 609
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQ 273
R V P+V L + I + S AL++ G ++ WG G + + P+
Sbjct: 610 TSR-VYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668
Query: 274 SLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L L A+G NH L LT D +V G + G + + + KV+
Sbjct: 669 RLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCG----LGNNNSPVLLPRKVT 724
Query: 332 NLDGVKVIQIAAGAEHSAVVT---ENRAIMT 359
D + QI+ G HS T +R I+T
Sbjct: 725 GFDNHVIYQISVGTSHSIAWTALPTDRCIVT 755
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 39/306 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
+++SWG G G+LG G + SP+L+ L + V +A G H A+TS G
Sbjct: 489 RIYSWGDGDYGKLGHGNHVTQKSPKLI-LGPMQGKVVRQIAVGYRHSAAITSE-----GL 542
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCG 151
+++WG G G+LGHG+ P V G + +S G + + +S D+ +++ G
Sbjct: 543 LYTWGDGDYGRLGHGDNHSRSIPTLVKDITG----VGSVSCGSSFTVVISQDATTVWSFG 598
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G G+LGHGD P +S+ + ++ C + SL L +G QV+ +GSG
Sbjct: 599 AGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTS--IG-QVFVWGSGPCL 655
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV-- 269
G + + +P+ D++I+ I+ + AL+ + +Y+WG + +
Sbjct: 656 GYGQAD---ATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGN 712
Query: 270 -NCPQSLPSSLSFSQAALGW-NHVLVLTGDGEVLMLGGSHH----GMLSDPERVSSTRPL 323
N P LP ++ G+ NHV+ + +G SH + +D V+S +P
Sbjct: 713 NNSPVLLPRKVT------GFDNHVIY------QISVGTSHSIAWTALPTDRCIVTSYKPF 760
Query: 324 SVALEK 329
+ L++
Sbjct: 761 CIDLKE 766
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 135/327 (41%), Gaps = 68/327 (20%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYP--------------------------KPVTFFDGHRY 126
V+ WG SS QLG E L P +P H
Sbjct: 407 VYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRFEHEC 466
Query: 127 TITHI--SAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP-VKVSSFVNKNVHQ 182
I ++ S G + H+ ++ G +++ GDG +G+LGHG++ + SP + + K V Q
Sbjct: 467 KIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQ 526
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG-IS 241
IA G RHS + + L +Y +G G G+LG + RS+ P + + DI VG +S
Sbjct: 527 IAVGYRHSAAITSEGL---LYTWGDGDYGRLGHGDNHSRSI--PTL---VKDITGVGSVS 578
Query: 242 ANGDRSAALSAEG-HLYTWGRGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVL 292
+ +S + ++++G G N TS V P+ + + L + L
Sbjct: 579 CGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSL 638
Query: 293 VLTGDGEVLMLG-------GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
LT G+V + G G P+R+ + L ++I IA G
Sbjct: 639 ALTSIGQVFVWGSGPCLGYGQADATFLVPKRLDEFQDL-------------QIIDIAVGD 685
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGN 372
H +T + + +WG GQ GLGN
Sbjct: 686 NHCLALTCDNDVYSWGNNASGQCGLGN 712
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVI 89
Q VWS+GAG +G+LG G P+++ NL L + + C LALTS
Sbjct: 589 QDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGL-LIRKVCCASQSSLALTSI---- 643
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+VF WG G LG+G+ DA + P + I I+ G NH ++ +++
Sbjct: 644 -GQVFVWGSGPC--LGYGQ-ADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYS 699
Query: 150 CGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSL 191
G+ GQ G G+ S P KV+ F N ++QI+ G HS+
Sbjct: 700 WGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSI 742
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSLSFS-QAALGW 288
D EI+ + + +SA+ YTWG G + + +L SS S + Q G
Sbjct: 3387 DREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESGRLVLQPTLTSSFSKAKQIHCGH 3446
Query: 289 NHVLVLTGDGEVLMLGGSHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIA--AG 344
N V+ DG VL G +G L + + + RP++ L G V ++A G
Sbjct: 3447 NSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITA-------LQGFVVTELATSTG 3499
Query: 345 AE-HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
E HS +TE + +WG G++G+LG GN+ Q P+ + + + D L V CG
Sbjct: 3500 LEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQI---EALRGEDV-LHVACG 3552
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 41/216 (18%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VY +GS QLG+S+ + +P +T S A S +G+ +GR
Sbjct: 407 VYVWGSNSSYQLGISEPE--KMLIPHLT----------------PSFANSEQGN---YGR 445
Query: 262 -GFNSTSDVNCPQSLP-------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G +S+ N P+ + +L S+ + G H L + DG + G +G L
Sbjct: 446 LGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDG--HTLAIASDGRIYSWGDGDYGKLGH 503
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
V+ P + + + G V QIA G HSA +T + TWG G++G+LG G+
Sbjct: 504 GNHVTQKSPKLI----LGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDN 559
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P +V ++ V CGS FT IS+
Sbjct: 560 HSRSIPTLV------KDITGVGSVSCGSSFTVVISQ 589
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 26/191 (13%)
Query: 208 GKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVG-ISANGD--RSAALSAEGHLYTWGRG 262
G G+LG+ S ++ R P++ H+ +I +S+ G + A++++G +Y+WG G
Sbjct: 441 GNYGRLGLGDSSNQNR----PKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDG 496
Query: 263 -FNSTSDVN-CPQSLPSSL-------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
+ N Q P + Q A+G+ H +T +G + G +G L
Sbjct: 497 DYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGH 556
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQLGLGN 372
+ S + P V D V ++ G+ + V++++ + ++G G++G+LG G+
Sbjct: 557 GDNHSRSIPTLVK-------DITGVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGD 609
Query: 373 TCDQIHPKVVN 383
T PKV++
Sbjct: 610 TSRVYRPKVIS 620
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
K+++ G T+G+LG G L P +++LS+ V +A GG H +ALT +
Sbjct: 2998 KIYACGEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 3051
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++
Sbjct: 3052 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSW 3109
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3110 GLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3166
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3167 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3224
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+DV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3225 HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNR 3284
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3285 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3311
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 20/257 (7%)
Query: 56 LSPQLL-NLSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
L+P L+ +LSS V + A G H LAL+S G+VFSWG G G+LGHG+
Sbjct: 468 LAPMLIHSLSSRKIVKLAAHPDGQHYLALSS-----NGEVFSWGCGDGGRLGHGDATYLE 522
Query: 114 YPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
P + F+G + + HI+ G +S ++ G L+T G G +G+LGHG ++P+
Sbjct: 523 EPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPML 582
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
V++ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEK 639
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQ 283
L D++IV + S AL+ +G +YTWG+G N + V P+ L +
Sbjct: 640 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD 699
Query: 284 AALGWNHVLVLTGDGEV 300
A+G H L LT DGEV
Sbjct: 700 VAVGSTHCLALTDDGEV 716
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4035 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 4087
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG LFT G G +G+LGHGD P V + V +ACG +L
Sbjct: 4088 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 4147
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + + + S AL+
Sbjct: 4148 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTK 4202
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4203 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4224
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4225 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4273
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4274 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4305
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G++F
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 4101
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V GHR +G + ++D +++ GDG
Sbjct: 4102 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4161
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4218
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4219 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4262
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 19/251 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P ++ + V +ACG + +T I
Sbjct: 501 EVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT-----ID 555
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P VT G + +G + V+++G +++
Sbjct: 556 GELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSW 615
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P V + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 616 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 672
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
+LG D V P++ L ++V ++ AL+ +G +++WG F++
Sbjct: 673 QRLGHGTD--EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDT 730
Query: 266 TSDVNCPQSLP 276
S+ P++LP
Sbjct: 731 LSNKKQPKALP 741
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3942 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3997
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3998 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4057
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L GV+V+ IAAG HSA +T + + TWG G +G+LG
Sbjct: 4058 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG 4112
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V D Q ++V CGSG
Sbjct: 4113 HGDSEDQLKPKLV---DALQGHRV-IDVACGSG 4141
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2943 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 3000
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ + P+ + S+ + A+ G H + LT DG+V G
Sbjct: 3001 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3060
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + +WG GE+G
Sbjct: 3061 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYG 3115
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3116 RLGHGDNATQLRPKLVKVLLGHRV------IQVACGS 3146
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 44/273 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G LG + + S P+ S + V QI C + L+L SG
Sbjct: 414 WGLLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLIL-----------SSSG-----A 457
Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFNS 265
V +S +L P + L +IV ++A +G ALS+ G +++WG G
Sbjct: 458 VYTQNYKSTTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD 517
Query: 266 TSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ + P ++ ++ + QA A G + V+T DGE+ G ++G L
Sbjct: 518 ATYLEEP-TMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSED 576
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
T P+ V+ L G+KV+ +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 577 QTTPM-----LVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 631
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK+V ++ Q+ D ++V CGS F+ A+++
Sbjct: 632 KTPKLV---EKLQDLDI-VKVCCGSQFSVALTK 660
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 162 DYRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
+Y+S + +P+ + S ++ + ++A +H L L + +V+ +G G G+LG
Sbjct: 462 NYKSTTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSN---GEVFSWGCGDGGRLG--HG 516
Query: 219 RIRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSD 268
+ P + + + +V I+ SA ++ +G LYTWGRG S+ D
Sbjct: 517 DATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSED 576
Query: 269 VNCPQSLPS--SLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P + + L A G L +T +G+V G +G L P
Sbjct: 577 QTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 636
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V EK+ +LD ++++ G++ S +T++ + TWG G++ +LG G D+ H + L
Sbjct: 637 V--EKLQDLD---IVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT--DE-HVRFPKL 688
Query: 385 GDEFQNRDTQLEVFCGSGFTYAIS 408
D Q + ++V GS A++
Sbjct: 689 LDTLQGKKV-VDVAVGSTHCLALT 711
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4257 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKL 4315
>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
Length = 1384
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 148/345 (42%), Gaps = 82/345 (23%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
L+P + L S + + +A G HV+ +T + VF+WGRGS GQLGHG + P
Sbjct: 532 LTP--IMLPSKTKIRDVAVGSGHVIVIT-----VERMVFTWGRGSKGQLGHGNLESCHVP 584
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
V G +I G S F SD+G + TCGDGT G LGHGD+ S S P + +
Sbjct: 585 SLVEGLKGK--SIIQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEA- 641
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
LL+D L + SV + V G H +
Sbjct: 642 -----------------LLRDQLS--------------------LYSVDVVSVACGSHHV 664
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQ--SLPSSLSFSQAALG 287
+VG +E ++TWGRG N S D PQ ++P +LS + G
Sbjct: 665 CVVG------------SESEVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNLSIKECHCG 712
Query: 288 WNHVLVLTGDGEVLMLGGS---------HHGMLSDPERVSSTRPLSVALEK----VSNLD 334
+ L+LT G +L G + G L + + + VA EK V L
Sbjct: 713 RDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTK--TEVAEEKIFTPVRELC 770
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V+ I+ G HSAVV E + T+G GQLG GN+ +Q P
Sbjct: 771 RHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAP 815
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G+ GQLG G L P L+ S+ CG L + G + +
Sbjct: 562 VFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKSIIQARCGEEFSLFASD-----NGIIMT 616
Query: 96 WGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G G++G LGHG+ +++AL ++ + + ++ G +H V +
Sbjct: 617 CGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYS---VDVVSVACGSHHVCVVGSESEV 673
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD------CLGNQ 201
FT G G G+LG G + P +V+ N ++ + CG R +LL D C N+
Sbjct: 674 FTWGRGKNGRLGLGSEQDFCQPQEVTVPDNLSIKECHCG-RDGTLLLTDVGSMLACGNNE 732
Query: 202 VYGFGSGKR-GQLGVSKDRIRSVSLPQVTI-----GLHDIEIVGISANGDRSAALSAEGH 255
G R G L K+ + + I L +V IS SA + GH
Sbjct: 733 GNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGPHHSAVVVEPGH 792
Query: 256 LYTWGRG 262
+YT+G+
Sbjct: 793 VYTFGKN 799
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G +G+LG G D PQ + + S+ CG L LT G +
Sbjct: 672 EVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNLSIKECHCGRDGTLLLTD-----VGSML 726
Query: 95 SWGRGSSGQLG----------------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
+ G +LG E+ + PV HR + IS G +HS
Sbjct: 727 ACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHR--VVDISLGPHHS 784
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
V + G ++T G + GQLG G+ + +P++V +F +K
Sbjct: 785 AVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPIQVKAFEDK 824
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 249 ALSAEGHLYTWGRGFN------STSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGE 299
++ E ++TWGRG + + P SL L S QA G L + +G
Sbjct: 555 VITVERMVFTWGRGSKGQLGHGNLESCHVP-SLVEGLKGKSIIQARCGEEFSLFASDNGI 613
Query: 300 VLMLGGSHHGMLSDPERVSSTRP--LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
++ G G L + S++RP + L +L V V+ +A G+ H VV +
Sbjct: 614 IMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACGSHHVCVVGSESEV 673
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
TWG G++G+LGLG+ D P+ V + D + E CG T ++
Sbjct: 674 FTWGRGKNGRLGLGSEQDFCQPQEVTVPDNLSIK----ECHCGRDGTLLLT 720
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P LPS A+G HV+V+T + V G G L S P V
Sbjct: 534 PIMLPSKTKIRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVP-----SLVE 588
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L G +IQ G E S ++N IMT G G G LG G+ C P+++
Sbjct: 589 GLKGKSIIQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLI 639
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++AL + K+ +A G+ H V+T R + TWG G GQLG GN
Sbjct: 529 TMALTPIMLPSKTKIRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGN 577
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 179/403 (44%), Gaps = 53/403 (13%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
WG G G+LG G L SP + + + LACGGAH L LT G+VF+
Sbjct: 35 WGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQS-----GRVFA 89
Query: 96 WGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G V L P V+ G + +SAG +HS V+ G LF G +
Sbjct: 90 TGLNDFGQLGVGSSVTHTLEPVEVS---GFHERVVEVSAGNHHSCAVTADGKLFVWGRNS 146
Query: 155 FGQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQ LG G + S+P KV + + +A G HS+ + ++ +V +G+ G+
Sbjct: 147 GGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEE---GEVLSWGAAGSGR 203
Query: 213 LGVSKD-RIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----R 261
LG + I SL P++ I+I I+A SA + +G L+ +G +
Sbjct: 204 LGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEK 263
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSS 319
GF +++ P + + A G H V+T G++ G + +G L + V S
Sbjct: 264 GFGRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCS 323
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EHGQ 367
L +L K + V +++ G +H+AV++ + I TWGWG GQ
Sbjct: 324 PEILKSSLFK------LPVSKVSCGWKHTAVISGDD-IYTWGWGGANGTFFEEGHSSGGQ 376
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
LG GN D P +V G + + V CG T AI +
Sbjct: 377 LGHGNDVDYFEPMMVPFGKNAR----AVHVSCGFNHTGAIYEY 415
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 246 RSAALSAEGHLYTWGRGFNST--SDVNCPQSL------PSSLSFSQAALGWNHVLVLTGD 297
R AAL G G G + S CP L P+SL A G H L LT
Sbjct: 30 RVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASL-----ACGGAHTLFLTQS 84
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV--KVIQIAAGAEHSAVVTENR 355
G V G + G L V+ T LE V + G +V++++AG HS VT +
Sbjct: 85 GRVFATGLNDFGQLGVGSSVTHT------LEPV-EVSGFHERVVEVSAGNHHSCAVTADG 137
Query: 356 AIMTWGWGEHGQLGLGNTCDQI--HPKVVNLGDEFQNRDTQL 395
+ WG GQLGLG ++ P V+ +F+ + L
Sbjct: 138 KLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVAL 179
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 137/286 (47%), Gaps = 22/286 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 ILVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
++ +G L+ WG+ G + +V PQ + S + G+ H +T DGE+ +
Sbjct: 155 VTEDGRLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPSQLLGNHRTPQLVSEIPE----KVIQVARGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAI 407
+ GQLGLG + PKV+ N+ D+ T + CG T I
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALI 310
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 148/337 (43%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H+L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHILVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S V++ G LF G +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAAVTEDGRLFMWGKNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVPNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPSQLLGNHRTPQLVSEIPE-KVIQVARGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++ + + T+G HG+LGLG
Sbjct: 300 ------ISCGENHTALIRDIGLMYTFGNSRHGKLGLG 330
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG + L + +PQL++ V +A GG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPSQLLGNHRTPQLVS-EIPEKVIQVARGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + + TI++IS G NH+ + D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIE--NIRDQTISYISCGENHTALIRDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
+ G+LG G ++ +H P S F+ V +ACG H +V
Sbjct: 321 NSRHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGCHMVVF 364
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG ++GQ+G + + PQ + + VS ++CG H +T+ G+++
Sbjct: 160 RLFMWGKNSEGQIGLKNVPNVCVPQQVTIGK--PVSWISCGYYHSAFVTT-----DGELY 212
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+G +G+LG + + P + I ++ G H+ ++++ ++T G G
Sbjct: 213 VFGEPENGKLGLPSQLLGNHRTPQLVSEIPEKVI-QVARGGEHTVVLTENA-VYTFGLGQ 270
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + +S P + + ++ + I+CG H+ L++D +Y FG+ + G+L
Sbjct: 271 FGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHT-ALIRDI--GLMYTFGNSRHGKL 327
Query: 214 GVSKDRIRSVSLPQV 228
G+ + + +P +
Sbjct: 328 GLGLENFTNHFIPTL 342
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 157/331 (47%), Gaps = 30/331 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGG 91
K+++ G T+G+LG G + P+ ++ S V +A GG H +ALT + G
Sbjct: 2974 KIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALT-----VDG 3028
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L++ G
Sbjct: 3029 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYSWG 3086
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGK 209
G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDGD 3143
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNS 265
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3144 FGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3201
Query: 266 TSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+DV+ PQ + A+G H L +T G+V G + HG + + +
Sbjct: 3202 GTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3261
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
P V L+G K+ ++A G+ HS T
Sbjct: 3262 P-----TLVQGLEGQKITRVACGSSHSVAWT 3287
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 3990 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--VEVVDIAAG 4042
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG LFT G G +G+LGHGD P V + V +ACG +L
Sbjct: 4043 GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLC 4102
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4103 LTDD---DMVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4157
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4158 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4179
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4180 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4228
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4229 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4260
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 20/257 (7%)
Query: 56 LSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
L+P L++ LSS V + A G H LAL++ G+V+SWG G G+LGHG+
Sbjct: 433 LAPMLIHGLSSRKIVKLAAHPDGQHFLALST-----SGEVYSWGCGDGGRLGHGDATYLE 487
Query: 114 YPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
P +T F G + + I+ G +S V+ G L+T G G +G+LGHG ++P+
Sbjct: 488 EPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPML 547
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
V++ + V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 548 VTALKGQKVVDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLVEK 604
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQ 283
L D++IV + S AL+ +G +YTWG+G N + V P+ L S
Sbjct: 605 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD 664
Query: 284 AALGWNHVLVLTGDGEV 300
A+G H L LT +GEV
Sbjct: 665 IAVGSTHCLALTDEGEV 681
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G++F
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA-----SGELF 4056
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V GHR +G + ++D +++ GDG
Sbjct: 4057 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4116
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4117 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4173
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4174 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4217
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P L+ S V +ACG + A+T+
Sbjct: 466 EVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTA-----D 520
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P VT G + +G + V+++G +++
Sbjct: 521 GELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSW 580
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P V + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 581 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD---GQVYTWGKGDN 637
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG D V P++ L ++V I+ AL+ EG +++WG
Sbjct: 638 QRLGHGTD--EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3897 IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3952
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3953 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4012
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L GV+V+ IAAG HSA +T + + TWG G +G+LG
Sbjct: 4013 KLGHGNRSPCDRP-----RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG 4067
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V D Q ++V CGSG
Sbjct: 4068 HGDSEDQLKPKLV---DALQGHRV-IDVACGSG 4096
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2919 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 2976
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ + P+ + S+ + A+ G H + LT DG+V G
Sbjct: 2977 ACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3036
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + +WG GE+G
Sbjct: 3037 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYG 3091
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3092 RLGHGDNTTQLRPKLVKVLLGHRV------IQVACGS 3122
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G LG Y + P+ + + V QI C + L+L + SG
Sbjct: 379 WGLLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSR-----------SG-----A 422
Query: 215 VSKDRIRSVSL-PQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNST---SD 268
V +S +L P + GL +IV ++A +G ALS G +Y+WG G D
Sbjct: 423 VYTQNYKSTTLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD 482
Query: 269 VNCPQSLPSSLSFS---------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ +FS Q A G + +T DGE+ G ++G L
Sbjct: 483 ATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV 542
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
T P+ V+ L G KV+ +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 543 TTPM-----LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 597
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK+V ++ Q+ D ++V CGS F+ A+++
Sbjct: 598 TPKLV---EKLQDLDI-VKVCCGSQFSVALTK 625
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYT 258
+VY +G G G+LG + +L G ++V I+ SAA++A+G LYT
Sbjct: 466 EVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYT 525
Query: 259 WGRG------FNSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSH 307
WGRG S+ DV P L ++L + G L +T +G+V G
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPM-LVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGD 584
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+G L P V EK+ +LD ++++ G++ S +T++ + TWG G++ +
Sbjct: 585 YGKLGRGGSDGCKTPKLV--EKLQDLD---IVKVCCGSQFSVALTKDGQVYTWGKGDNQR 639
Query: 368 LGLGNTCDQIHPKVVN 383
LG G +PK+++
Sbjct: 640 LGHGTDEHVRYPKLLD 655
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4212 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKM 4270
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 142/316 (44%), Gaps = 28/316 (8%)
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+PS V + +WG + GQLG G + P V+ T+T ++ G +HS ++
Sbjct: 50 TPSGVASDTILAWGANNVGQLGDGSTIARNAPVAVSLPP--DTTVTAVAGGDSHSLALTS 107
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G + G+ FGQLG G+ + S P+ V+ + V IA HSL L V
Sbjct: 108 AGAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTS---AGAVL 164
Query: 204 GFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+G+ GQLG + + +V+LP T + I+A + S A+++ G W
Sbjct: 165 AWGANNVGQLGNGNTFNSNTPVTVNLPPGT------TVATIAAGTNHSLAITSTGAALAW 218
Query: 260 GRGF--------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G +TS +LP S + + A G ++ L +T G L GG+ +G L
Sbjct: 219 GGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQL 278
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
S P++VAL G + IAAG HS VT + WG GQLG+G
Sbjct: 279 GTGNNADSLIPIAVALPP-----GTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIG 333
Query: 372 NTCDQIHPKVVNLGDE 387
T + P +VNL +
Sbjct: 334 TTTNSDTPVIVNLPPD 349
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 157/363 (43%), Gaps = 35/363 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +WGA GQLG G +P ++L ++V+ +A G +H LALTS G V
Sbjct: 58 TILAWGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTS-----AGAVL 112
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G +++ P+T T+ I+A HS ++ +G + G
Sbjct: 113 AWGENNFGQLGTGNNLNSSV--PITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGANN 170
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD--CLGNQVYGFGSGKRGQ 212
GQLG+G+ + ++PV V+ V IA G HSL + L G G
Sbjct: 171 VGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITSTGAALAWGGNGNGQLGNNS 230
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW--------GRGFN 264
S + I +V+LP T I I+A S A+++ G W G G N
Sbjct: 231 TATSLEPI-AVTLPPST------TITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTGNN 283
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ S + +LP + + A G+ H L +T G L GG+ G L +S P+
Sbjct: 284 ADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVI 343
Query: 325 VALEK---VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
V L ++ DG G HS A + WG GQLG GN + + P
Sbjct: 344 VNLPPDTTITTNDG--------GFFHSLGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIA 395
Query: 382 VNL 384
V L
Sbjct: 396 VAL 398
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 122/314 (38%), Gaps = 61/314 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WGA GQLG G + +P +NL ++V+ +A G H LA+TS G
Sbjct: 162 AVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITS-----TGAAL 216
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +GQLG+ +L P VT TIT I+AG ++S ++ +G G +
Sbjct: 217 AWGGNGNGQLGNNSTATSLEPIAVTLPP--STTITAIAAGSSYSLAITSTGTALAWGGNS 274
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ P+ V+ + IA G HSL + +G RGQLG
Sbjct: 275 NGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTST---GTALAWGGNSRGQLG 331
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ G + SD +
Sbjct: 332 I----------------------------------------------GTTTNSDTPVIVN 345
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
LP + + G+ H L G L G + G L +S P++VAL
Sbjct: 346 LPPDTTITTNDGGFFHSLGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIAVALPS----- 400
Query: 335 GVKVIQIAAGAEHS 348
G K+ IAAG HS
Sbjct: 401 GTKITTIAAGGGHS 414
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG ++GQLGTG D L P + L ++++ +A G H LA+TS G +WG
Sbjct: 269 AWGGNSNGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTS-----TGTALAWG 323
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLG G ++ P V TIT G+ HS +G G+ GQ
Sbjct: 324 GNSRGQLGIGTTTNSDTPVIVNLPP--DTTITTNDGGFFHSLGSMSTGAALAWGNNFSGQ 381
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
LG G+ + P+ V+ + IA G HSL L+
Sbjct: 382 LGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVA 419
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
+WG GQLGTG + L P + L S + ++ +A GG H LAL +P +
Sbjct: 373 AWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLALVAPPT 422
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 149/315 (47%), Gaps = 31/315 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +ACG H +T G+++ +G GQLG G P V + +
Sbjct: 40 VVEMACGDEHSAVVTE-----SGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK--V 92
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
++ G NH+ S+SG LF+ G GQLGH D + P ++ S + QIACG
Sbjct: 93 RKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTY 152
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
HS++L +D VY +G+ GQLG+ ++ SLP+ E+V +S +A
Sbjct: 153 HSIILSED---GDVYVWGNNNEGQLGLGEEVEN--SLPKKL--KFKKEVVSVSCGYYHTA 205
Query: 249 ALSAEGHLYTWGR------GFNST--SDVNCPQS--LPS-SLSFSQAALGWNHVLVLTGD 297
++ +G LYT+G G +S+ S+ PQS +P+ + + + G H + +T
Sbjct: 206 LVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQ 265
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTENRA 356
G G G L T+ L V K + L G K I ++ G H+AVVTE+
Sbjct: 266 GHCYAWGDGSQGQLG-----HGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGK 320
Query: 357 IMTWGWGEHGQLGLG 371
+ T+G G HG+LG G
Sbjct: 321 VFTFGDGRHGKLGQG 335
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 25/327 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ +G+ GQLG G P + V +ACG H + + GK+F
Sbjct: 58 RLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSE-----SGKLF 112
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G GQLGH + + L PK + + I I+ G HS +S+ G ++ G+
Sbjct: 113 SFGCNEDGQLGHVDKENELLPKEIESIP--QMEIKQIACGTYHSIILSEDGDVYVWGNNN 170
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ +S P K+ K V ++CG H+ ++ +D +Y FG + G+LG
Sbjct: 171 EGQLGLGEEVENSLPKKLK--FKKEVVSVSCGYYHTALVTRDGF---LYTFGENELGKLG 225
Query: 215 VSKDRIRSVSLPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------ST 266
+S ++ + ++PQ V + + E + +S + A++ +GH Y WG G
Sbjct: 226 LSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKL 285
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+VN P+ + S + G +H V+T G+V G HG L E S
Sbjct: 286 LEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDP 345
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVV 351
V L S + V+ ++ G H+ V+
Sbjct: 346 VYL---SRFNYFNVVYVSCGGCHTLVL 369
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 35/292 (11%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G VF++G+ + D + K DG + ++ G HS V++SG L+
Sbjct: 15 GAVFTFGKS--------KFADNIANKFWIKNDG----VVEMACGDEHSAVVTESGRLYVF 62
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLG G +S + P V + V ++ACG H++V + +++ FG +
Sbjct: 63 GSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSE---SGKLFSFGCNED 119
Query: 211 GQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG V K+ + LP+ + +EI I+ S LS +G +Y WG N+ +
Sbjct: 120 GQLGHVDKE---NELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGN--NNEGQL 174
Query: 270 ----NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSS 319
SLP L F + + G+ H ++T DG + G + G LS + ++
Sbjct: 175 GLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNT 234
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
T P SVA+ D + I ++ GA H+ +T+ WG G GQLG G
Sbjct: 235 TVPQSVAMP----ADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHG 282
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
+ D G +FT FG+ D ++ +K N V ++ACG HS V+ +
Sbjct: 11 IPDLGAVFT-----FGKSKFADNIANKFWIK-----NDGVVEMACGDEHSAVVTE---SG 57
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
++Y FGS GQLG+ +S++ P L ++ ++ + + S G L+++G
Sbjct: 58 RLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFG 115
Query: 261 ------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G + P+ + S + Q A G H ++L+ DG+V + G ++ G L
Sbjct: 116 CNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLG 175
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
E V ++ P + +K +V+ ++ G H+A+VT + + T+G E G+LGL +
Sbjct: 176 LGEEVENSLPKKLKFKK-------EVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSS 228
Query: 373 T--CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR--HCL 412
+ + P+ V + + D + V CG+ T AI++ HC
Sbjct: 229 SQLSNTTVPQSVAMP---ADNDEYISVSCGARHTVAITKQGHCY 269
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 110/283 (38%), Gaps = 60/283 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++S+G DGQLG +EL P+ + + +ACG H + L+ G V+
Sbjct: 110 KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSE-----DGDVY 164
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF------------------FDGHRYTI-------- 128
WG + GQLG GE V+ PK + F DG YT
Sbjct: 165 VWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKL 224
Query: 129 -------------------------THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-D 162
+S G H+ ++ G + GDG+ GQLGHG
Sbjct: 225 GLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK 284
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
+ P ++ + ++CG H+ V+ + +V+ FG G+ G+LG +D +
Sbjct: 285 LLEVNEPKQIKKLSGQKCISVSCGESHTAVVTE---SGKVFTFGDGRHGKLGQGEDSFSN 341
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
P + +V +S G + L+ + + G NS
Sbjct: 342 SFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDGENS 384
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 471 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 525
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 642
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 643 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 702
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 703 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 757
Query: 342 AAGAEHS 348
A G S
Sbjct: 758 ACGPAQS 764
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 506 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 560
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 620
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 677
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 678 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 419 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 467
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 468 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 523
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 524 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 582
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 583 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 637
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 638 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 665
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 148 FTCGDGTF------GQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCL 198
C + F G++ Y S + +P V ++N+ +IA H L L
Sbjct: 447 IACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLAL---AA 503
Query: 199 GNQVYGFGSGKRGQLG----VSKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAALSAE 253
+VY +G G G+LG V + + +S G H +V I+ SAA++AE
Sbjct: 504 TGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKH---VVHIACGSTYSAAITAE 560
Query: 254 GHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTGDGEVLML 303
G LYTWGRG S+ D P + L A G L +T +G+V
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 620
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P +EK+ +LD V+++ G++ S +T++ + +WG G
Sbjct: 621 GDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIALTKDGQVYSWGKG 675
Query: 364 EHGQLGLGNTCDQIHPKVVN 383
++ +LG G +PK++
Sbjct: 676 DNQRLGHGTEEHVRYPKLLE 695
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3794 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3846
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 3847 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 3906
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 3907 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 3961
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 3962 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 3983
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 3984 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4032
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4033 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4064
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 3860
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 3861 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 3920
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 3921 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 3977
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 3978 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4021
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 128/275 (46%), Gaps = 26/275 (9%)
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
+ GKVFSWG G G+LGH + P+ + R I I+ G +HS ++ SG L+
Sbjct: 2817 VDGKVFSWGEGDDGKLGHFSRM----PRLIEALKTKR--IRDIACGSSHSAALTSSGELY 2870
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFG 206
T G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ G
Sbjct: 2871 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSLG 2927
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG---- 262
G ++G + ++ ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 2928 DGDLWKIGPGPE-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2986
Query: 263 FNSTSDVNC--PQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
SDV+ PQ L + + G H L +T G+V G + HG +
Sbjct: 2987 LGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3046
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ +P V L+G K+ ++A G+ HS T
Sbjct: 3047 VNRKP-----TLVQGLEGQKITRVACGSSHSVAWT 3076
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 3756
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3757 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3813
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3814 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3871
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 3872 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3931
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 3932 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 3986
Query: 379 PKVVN 383
P+ V
Sbjct: 3987 PRQVQ 3991
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3701 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 3756
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3757 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3816
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3817 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3871
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 3872 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 3900
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 130/316 (41%), Gaps = 36/316 (11%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++ I KVFSWG QLG + P + ++ G V+ G
Sbjct: 2705 AATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 2762
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVK------VSSFVNKNVHQIACGMRHSLVLLKDCLG 199
++ CG+ T S + P+ +SS+V K V + G + D
Sbjct: 2763 KVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKV-AVHSGTSQTGFXPVD--- 2818
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG +P++ L I I+ SAAL++ G LYTW
Sbjct: 2819 GKVFSWGEGDDGKLG------HFSRMPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2872
Query: 260 GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLG-GSH 307
G G ++T+ + P+ + L Q A G L LT +G V LG G
Sbjct: 2873 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDL 2931
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+ PE P + + L+G V QI GA+ S +T++ + TWG G++ +
Sbjct: 2932 WKIGPGPEVKGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2986
Query: 368 LGLGNTCDQIHPKVVN 383
LG G+ P+VV
Sbjct: 2987 LGHGSDVHVRKPQVVE 3002
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 34/220 (15%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K++ + +P + L + +V ++ A++ EG +Y
Sbjct: 2708 IRTKVFSWGLNDKDQLGGLKNK--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2765
Query: 258 T---------WGRGFNSTSDVNCPQSLPSSLS---FSQAAL--GWNHVLVLTGDGEVLML 303
WG G +S + V P ++LS + A+ G + DG+V
Sbjct: 2766 ACGEATKWPAWGLGISSGT-VPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSW 2824
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G G L R+ + L ++ IA G+ HSA +T + + TWG G
Sbjct: 2825 GEGDDGKLGHFSRMPRL---------IEALKTKRIRDIACGSSHSAALTSSGELYTWGLG 2875
Query: 364 EHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
E+G+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 2876 EYGRLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 2909
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4016 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4074
>gi|350580248|ref|XP_003122992.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 1 [Sus scrofa]
Length = 458
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 134/292 (45%), Gaps = 25/292 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG S GQLG G D L P+ ++ F + I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFC-KPGCVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G S + + Q+ACG +++L K+ QV GS GQ
Sbjct: 76 NKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKN---GQVLSCGSNSFGQ 132
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LGV R V +PQ I + ++V I+A + A +A G ++ WG G S+ CP
Sbjct: 133 LGVPHGPRRCV-VPQA-IEVQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCP 190
Query: 273 -QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
Q+LP + L SQA G H LT GE+ + G + HG L+
Sbjct: 191 GQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLAS---Q 247
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ PL +E KV + +G H TE + TWG ++GQLG
Sbjct: 248 AAFLPLPQKIE-AHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 177/408 (43%), Gaps = 41/408 (10%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
E +++WGA + GQLG G D L PQ L+ V + GG H +T
Sbjct: 9 EAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD-- 66
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G +F G GQLG G D LY G I ++ GW+ + ++ +G
Sbjct: 67 ---QGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLG--CPIQQVACGWDFTIILTKNGQ 121
Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+ +CG +FGQLG HG R + + V IA G+RH+L L Q +G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVP--QAIEVQREKVVSIAAGLRHALAATASGLVFQ-WG 178
Query: 205 FG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G SG+R G + + P GL + + V + A SA+L+ G LY WG
Sbjct: 179 TGLASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGS 238
Query: 262 G-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLMLGGSHHGMLS 312
+ + + PQ + + ++ AA+ GW H++ T G+V G + +G L
Sbjct: 239 NKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298
Query: 313 ---------DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWG 361
P++ +S+ P S V S+L + +++ G+EH+ V +WG
Sbjct: 299 RTLESPEGWKPKKQASSLPCSRPARSVPSSLPCLTGATEVSCGSEHNLAVVGG-TCYSWG 357
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
W EHG G G + PK V + + L + CG+G + A+ +
Sbjct: 358 WNEHGMCGDGTEANVWTPKPV----QALRSSSGLRLGCGAGHSLALCQ 401
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 152/330 (46%), Gaps = 28/330 (8%)
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
+ PS + V +WG G GQLG G + + + D Y ++ + AG +S +
Sbjct: 1 MAPPSRPVA--VLAWGSGEDGQLGMGGCDEKDRARCICALDA--YAVSAVVAGSRNSLAI 56
Query: 142 SDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
D G LFT G G LGH + ++ SSP V + V + Q A G H L +
Sbjct: 57 CDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDK---G 113
Query: 201 QVYGFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ Y +G + GQ G +R R + +PQ +++ ++A G S L+
Sbjct: 114 RAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA--LKLKVRQVAAGGTHSVVLTQ 171
Query: 253 EGHLYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
EGH++TWG+ + +++ P + S A+G H L L+ D + G + +G
Sbjct: 172 EGHVWTWGQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRILWAWGNNEYGQ 231
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L + T+P S + +V L + ++ IAAG HSA +T+ + WG GEHG+LG
Sbjct: 232 LG----IGDTQPRSQPI-RVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGF 286
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
G D +V L + + ++V CG
Sbjct: 287 G---DDKSSHMVPLQVQLLAGEDIVQVSCG 313
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 165/398 (41%), Gaps = 43/398 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V V +WG+G DGQLG G ++ + + +VS + G + LA+ G +
Sbjct: 8 VAVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICD-----DGSL 62
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG G LGH E P V G + I GW H V D G + G
Sbjct: 63 FTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAI-GGW-HCLAVDDKGRAYAWGG 120
Query: 153 GTFGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+GQ G R P+ + V Q+A G HS+VL ++ V+
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQE---GHVWT 177
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
+G Q D I+++S P GL + ++ + A + ALS + L+ WG
Sbjct: 178 WG-----QPWPPGD-IKNISTPVRVQGLEQVSMIAVGAF--HNLALSVDRILWAWGNNEY 229
Query: 262 GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DP 314
G D P+S P S+LS A G H LT +GEV G HG L
Sbjct: 230 GQLGIGDTQ-PRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGD 288
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
++ S PL V L L G ++Q++ G HS V+T + I ++G G+HG+LG G
Sbjct: 289 DKSSHMVPLQVQL-----LAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKV 343
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
HP V + T E + + RH L
Sbjct: 344 TTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTL 381
>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
variabilis]
Length = 272
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 134/285 (47%), Gaps = 28/285 (9%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ +GRG GQLG G D P+ V + +++AG H+ V+ G L+ G
Sbjct: 1 EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSR--DVVNLAAGALHTAAVTSDGELYVMG 58
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
QLG +P +V++ V ++ACG H+L ++ G V FGS + G
Sbjct: 59 SNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVD---GGAVAAFGSAEYG 115
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--------WGRGF 263
Q+G+ R V LP+V L + IV ++A G + ALS+ G +++ GRG
Sbjct: 116 QVGLGPCGAR-VELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGT 174
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-------DPER 316
+DV P S L Q A G NH +T DG VL G H +L D E
Sbjct: 175 TEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN 234
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
S+ +P V L G+ Q++ G +H+ ++TE+ ++ WG
Sbjct: 235 CSTPKP-------VQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 28/285 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+VW +G G GQLG G D P+L+ V LA G H A+TS G+++
Sbjct: 1 EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSD-----GELY 55
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G QLG + DAL P VT + ++ + ++ G H+ V D G + G
Sbjct: 56 VMGSNEESQLGVRQRSDALAPTRVTALE--QFQVQRVACGPAHTLAVVDGGAVAAFGSAE 113
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQ+G G + P V + ++ ++A G H+L L V+ G+G G L
Sbjct: 114 YGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSST---GGVFSCGNGSFGAL 170
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------- 262
G + +P+ L + +V I+ + SAA++A+G + TWGRG
Sbjct: 171 G--RGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCG 228
Query: 263 ---FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
F + S Q+L + Q + G +H ++LT DG V G
Sbjct: 229 HGDFENCSTPKPVQAL-KGIVGRQVSCGDDHTVLLTEDGSVYAWG 272
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 20/194 (10%)
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+V+ FG G GQLG V +P++ GL ++V ++A +AA++++G LY G
Sbjct: 1 EVWVFGRGDMGQLG--DGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58
Query: 261 R------GFNSTSDVNCPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G SD P + + F + A G H L + G V G + +G +
Sbjct: 59 SNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVG 118
Query: 313 DPERVSSTRPLSVALE---KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P +E V +L + ++++AAG H+ ++ + + G G G LG
Sbjct: 119 -------LGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALG 171
Query: 370 LGNTCDQIHPKVVN 383
G T P+ ++
Sbjct: 172 RGTTEGNDVPRPIS 185
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
EV + G G L D ST + V V L V+ +AAGA H+A VT + +
Sbjct: 1 EVWVFGRGDMGQLGD----GSTEDVFVP-RLVKGLKSRDVVNLAAGALHTAAVTSDGELY 55
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
G E QLG+ D + P V ++FQ + V CG T A+
Sbjct: 56 VMGSNEESQLGVRQRSDALAPTRVTALEQFQVQ----RVACGPAHTLAV 100
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 24/301 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + + P+ FF G R + + G H+ F+ D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKR--VCDVGCGLKHTVFLLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P V + + + ++CG H+L L QV+ +G G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEHVVALDAQIIVAVSCGESHTLALNDK---GQVFSWGLGSN 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNST--- 266
GQLG++ V +P+ L D++I ++ S ALS G +++WG+ F
Sbjct: 114 GQLGLNNFE-ECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLG 172
Query: 267 ---SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
S ++ PQ + S + F+Q + G H +T G V G + G L +
Sbjct: 173 MHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWF 232
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P AL K +L +VI ++ G +H+A +T+ R + T+G G +GQLG T +I+P+
Sbjct: 233 P---ALLK--SLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRK 287
Query: 382 V 382
V
Sbjct: 288 V 288
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 136/318 (42%), Gaps = 29/318 (9%)
Query: 39 WGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E+ P+ V + CG H + L G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G +H+ ++D G +F+ G G+ G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEHVVALDAQ--IIVAVSCGESHTLALNDKGQVFSWGLGSNG 114
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG ++ P + + + Q+ACG HS L K G QV+ +G + GQLG+
Sbjct: 115 QLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSK---GGQVFSWGQNQFGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
S+S PQ+ L I +SA G S A++ G ++ WG+ G N T D
Sbjct: 172 GMHG-SSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S + G +H LT V G +G L P
Sbjct: 231 WFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGA 345
KV L G V QI+ G+
Sbjct: 286 RKVFELMGNVVTQISCGS 303
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG G++GQLG + + P+ + S ++ +ACG H AL+ GG+V
Sbjct: 104 QVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSK-----GGQV 158
Query: 94 FSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
FSWG+ GQLG HG + P+ + G + +SAG HS ++ SG +F
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIST--PQIIQSLQGIPF--AQLSAGGAHSFAITLSGAVFGW 214
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D + P + S ++ V ++CG H+ L K V+ FG+G
Sbjct: 215 GKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTK---LRGVFTFGAGGY 271
Query: 211 GQLG 214
GQLG
Sbjct: 272 GQLG 275
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 16/229 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G GQLG + + P+ + + ++CG +H LAL G+VFS
Sbjct: 55 VYTCGCNDLGQLGHEKSRKK--PEHVVALDAQIIVAVSCGESHTLALND-----KGQVFS 107
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GS+GQLG + + P+ + + I ++ G+ HS +S G +F+ G
Sbjct: 108 WGLGSNGQLGLNNFEECVRVPRNIKCLSDVQ--IAQVACGYWHSHALSKGGQVFSWGQNQ 165
Query: 155 FGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G + S S+P + S Q++ G HS + L V+G+G K GQL
Sbjct: 166 FGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAI---TLSGAVFGWGKNKFGQL 222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G++ + R P + L ++ +S D +AAL+ ++T+G G
Sbjct: 223 GLNDTKDR--WFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG 269
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG GQLG G +S PQ++ + L+ GGAH A+T + G V
Sbjct: 157 QVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ GQLG + D +P + R + +S G +H+ ++ +FT G G
Sbjct: 212 FGWGKNKFGQLGLNDTKDRWFPALLKSLRSQR--VIFVSCGEDHTAALTKLRGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+GQLGH +P KV + V QI+CG
Sbjct: 270 GYGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 174/391 (44%), Gaps = 43/391 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG+ GQLG + P+L+ +L S + + + CGG H +T G++
Sbjct: 10 VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHS-----GELI 64
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G GQLG G++ D + P+ +T + ++S HS + + G L+T G
Sbjct: 65 VWGYGGCGQLGLGDLKDIVIPRVMTSIK----NVINVSCSDRHSAAILEDGRLYTWGCNK 120
Query: 155 FGQLGHGDYRSHS------SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+LG G + +P V +N+ V +++CG H+ L N+ Y +G G
Sbjct: 121 SGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDL---NKAYTWGLG 177
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RG 262
+G+LG V P++ L + + I G +A L G +Y G G
Sbjct: 178 MQGRLG--HGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLG 235
Query: 263 FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLML--GGSHHGMLSDPERV 317
F S D+ P+ L SL S + +LG+ H V+T G+V GG + + PE
Sbjct: 236 FGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPE-- 293
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P ++ + V L+ + + I+ G H+ V++ + WG + LG+
Sbjct: 294 ----PDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRN----LGHGVIDS 345
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
P L QN++ ++V CG T A+S
Sbjct: 346 KPNDPTLHPILQNKNI-VQVSCGKTHTIALS 375
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 149/333 (44%), Gaps = 33/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V +WG GQLG + PK + + + +R I + G +HS ++ SG L G
Sbjct: 10 VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNR--IKEVCCGGHHSAVITHSGELIVWG 67
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G GQLG GD + P ++S KNV ++C RHS +L+D ++Y +G K G
Sbjct: 68 YGGCGQLGLGDLKDIVIPRVMTSI--KNVINVSCSDRHSAAILED---GRLYTWGCNKSG 122
Query: 212 QLGV----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
+LG+ + PQ+ L + +++ +S +A L+ YTWG G
Sbjct: 123 KLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRL 182
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SDPERV 317
T+DV P+ + S LS G +H +L +G+V GG G L E +
Sbjct: 183 GHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDI 242
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW-GEHGQLGLGNTCDQ 376
+ L +L S + +++ G +HSAV+T + TWG G G + G D
Sbjct: 243 YIPKLLQGSLTNKS------IKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDI 296
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK+V E N + + CG T IS
Sbjct: 297 LSPKLV----EKLNSIIAVNISCGHSHTVVISN 325
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 158/335 (47%), Gaps = 44/335 (13%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G GQLG G L D + P+++ +S+ +V ++C H A+ G++++WG
Sbjct: 66 WGYGGCGQLGLGDLKDIVIPRVM--TSIKNVINVSCSDRHSAAILED-----GRLYTWGC 118
Query: 99 GSSGQLGHGEMVDALY------PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
SG+LG G + L P+ V + + +S G H+ ++D +T G
Sbjct: 119 NKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEK--VIKVSCGSFHTACLTDLNKAYTWGL 176
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHGD +P + S +V I CG H+ +LL + +VY G G G+
Sbjct: 177 GMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNN---GKVYFCGGGAFGK 233
Query: 213 LGV-SKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRG------FN 264
LG SK+ I +P++ G L + I +S SA ++ +G +YTWG+G +N
Sbjct: 234 LGFGSKEDIY---IPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYN 290
Query: 265 STS-DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSH---HGMLSDPERVS 318
D+ P+ + +S+ + G +H +V++ G+V G + HG++
Sbjct: 291 GPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLGHGVIDSKPNDP 350
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+ P+ L ++Q++ G H+ +++
Sbjct: 351 TLHPI---------LQNKNIVQVSCGKTHTIALSD 376
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 28/283 (9%)
Query: 35 KVWSWGAGTDGQLGTG------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
++++WG G+LG G + +PQL+ V ++CG H LT +
Sbjct: 112 RLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLN-- 169
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
K ++WG G G+LGHG+ D PK + G ++ +I G +H+ + ++G ++
Sbjct: 170 ---KAYTWGLGMQGRLGHGDTNDVYTPKLIESLAG--LSVKNIVCGGHHTAILLNNGKVY 224
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
CG G FG+LG G P + S NK++ +++ G +HS V+ +VY +G
Sbjct: 225 FCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTK---GKVYTWGQ 281
Query: 208 GKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-- 264
G G+LG + + P++ L+ I V IS + +S G +Y WG N
Sbjct: 282 G--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLG 339
Query: 265 ---STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLM 302
S N P P + + Q + G H + L+ D E+L+
Sbjct: 340 HGVIDSKPNDPTLHPILQNKNIVQVSCGKTHTIALS-DIELLI 381
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 442 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 496
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 497 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 556
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 557 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 613
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 614 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 673
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 674 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 728
Query: 342 AAGAEHS 348
A G S
Sbjct: 729 ACGPAQS 735
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 477 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA-----E 531
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 532 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 591
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 592 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 648
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 649 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 696
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 390 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 438
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 439 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 494
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 495 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 553
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 554 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 608
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 609 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 636
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 148 FTCGDGTF------GQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCL 198
C + F G++ Y S + +P V ++N+ +IA H L L
Sbjct: 418 IACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLAL---AA 474
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEG 254
+VY +G G G+LG D + + P+V + +V I+ SAA++AEG
Sbjct: 475 TGEVYSWGCGDGGRLG-HGDTV-PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 532
Query: 255 HLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTGDGEVLMLG 304
LYTWGRG S+ D P + L A G L +T +G+V G
Sbjct: 533 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 592
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+G L P +EK+ +LD V+++ G++ S +T++ + +WG G+
Sbjct: 593 DGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIALTKDGQVYSWGKGD 647
Query: 365 HGQLGLGNTCDQIHPKVVN 383
+ +LG G +PK++
Sbjct: 648 NQRLGHGTEEHVRYPKLLE 666
>gi|350580250|ref|XP_003480771.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 2 [Sus scrofa]
Length = 379
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 134/292 (45%), Gaps = 25/292 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG S GQLG G D L P+ ++ F + I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFC-KPGCVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G S + + Q+ACG +++L K+ QV GS GQ
Sbjct: 76 NKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKN---GQVLSCGSNSFGQ 132
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LGV R V +PQ I + ++V I+A + A +A G ++ WG G S+ CP
Sbjct: 133 LGVPHGPRRCV-VPQA-IEVQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLCP 190
Query: 273 -QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
Q+LP + L SQA G H LT GE+ + G + HG L+
Sbjct: 191 GQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLAS---Q 247
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ PL +E KV + +G H TE + TWG ++GQLG
Sbjct: 248 AAFLPLPQKIE-AHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 149/350 (42%), Gaps = 36/350 (10%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPS 86
E +++WGA + GQLG G D L PQ L+ V + GG H +T
Sbjct: 9 EAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD-- 66
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G +F G GQLG G D LY G I ++ GW+ + ++ +G
Sbjct: 67 ---QGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLG--CPIQQVACGWDFTIILTKNGQ 121
Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+ +CG +FGQLG HG R + + V IA G+RH+L L Q +G
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVP--QAIEVQREKVVSIAAGLRHALAATASGLVFQ-WG 178
Query: 205 FG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G SG+R G + + P GL + + V + A SA+L+ G LY WG
Sbjct: 179 TGLASSGRRLCPGQTLPLFLTAKEPSKVTGLENSQAVCVLAGSGHSASLTDAGELYVWGS 238
Query: 262 G-----FNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
+ + + PQ + + + + GW H++ T G+V G + +G L
Sbjct: 239 NKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 298
Query: 313 ---------DPERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVV 351
P++ +S+ P S V S+L + +++ G+EH+ V
Sbjct: 299 RTLESPEGWKPKKQASSLPCSRPARSVPSSLPCLTGATEVSCGSEHNLAV 348
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 471 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 525
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 642
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 643 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 702
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 703 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 757
Query: 342 AAGAEHS 348
A G S
Sbjct: 758 ACGPAQS 764
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 506 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA-----E 560
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 620
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 621 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 677
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 678 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 419 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 467
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 468 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 523
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 524 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 582
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 583 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 637
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 638 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 665
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 148 FTCGDGTF------GQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCL 198
C + F G++ Y S + +P V ++N+ +IA H L L
Sbjct: 447 IACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLAL---AA 503
Query: 199 GNQVYGFGSGKRGQLG----VSKDRIRSVS-LPQVTIGLHDIEIVGISANGDRSAALSAE 253
+VY +G G G+LG V + + +S G H +V I+ SAA++AE
Sbjct: 504 TGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKH---VVHIACGSTYSAAITAE 560
Query: 254 GHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTGDGEVLML 303
G LYTWGRG S+ D P + L A G L +T +G+V
Sbjct: 561 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 620
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P +EK+ +LD V+++ G++ S +T++ + +WG G
Sbjct: 621 GDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIALTKDGQVYSWGKG 675
Query: 364 EHGQLGLGNTCDQIHPKVVN 383
++ +LG G +PK++
Sbjct: 676 DNQRLGHGTEEHVRYPKLLE 695
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 142/303 (46%), Gaps = 25/303 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + + + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 677 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVP 731
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 732 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 791
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 792 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 848
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 849 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 908
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P + LD ++ I
Sbjct: 909 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEP-----SALPGLDTKHIVGI 963
Query: 342 AAG 344
A G
Sbjct: 964 ACG 966
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 712 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 766
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 767 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 826
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 827 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 883
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 884 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 931
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 625 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 673
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL I+ I+A+ D AL+A G +Y+WG G T
Sbjct: 674 YNSDTL----APQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 729
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 730 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 788
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 789 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 843
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 844 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 871
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 680 APQLVQGLASRNIIKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLG-HGDTV-PLEE 734
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 735 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 794
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 795 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 852
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 853 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 901
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 154/349 (44%), Gaps = 43/349 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG GQLG G D P + + L V +A G AH LAL G V++
Sbjct: 368 VWSWGNNYYGQLGNGNSIDSYVP--VQVRGLKDVVAIATGNAHSLALKKD-----GTVWA 420
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG+G + P V + I+AG +HS G ++ G+ F
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLK----DVVAIAAGSDHSLAFKKDGTVWAWGNNEF 476
Query: 156 GQLGHGD--Y-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG+G Y + ++ PV+V K+V +A G HSL L KD ++ +GS G
Sbjct: 477 GQLGNGSGGYGQYYAVPVQVKGL--KDVVAVAAGSVHSLALKKD---GTIWAWGSNYHGL 531
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-- 270
LG + I +P GL D+ V I+A + S L +G ++ WG + + N
Sbjct: 532 LG---NDIERSFVPVQVKGLKDV--VAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSR 586
Query: 271 -----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRPLS 324
P + A G +H L L DG V G + G L + P S P+
Sbjct: 587 LVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPVQ 646
Query: 325 VALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
V G+K ++ IA G HS + ++ + W WGE+ LGN
Sbjct: 647 V--------KGLKDILAIATGEWHSLAIKKDGTV--WAWGENSTGQLGN 685
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 152/343 (44%), Gaps = 34/343 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW W + R DE SP + + L V +A G H LAL G V++
Sbjct: 216 VWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRYHSLALKKD-----GTVWA 270
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG+G+ D+ P V + I+AG NHS + G ++ GD +
Sbjct: 271 WGNNYYGQLGNGKSEDSYDPVQVKNLK----DVVAIAAGENHSLALKKDGTIWAWGDNEW 326
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+ PV+ S K+V IA G HSL L KD V+ +G+ GQLG
Sbjct: 327 GQLGNSISEKLCVPVQFKSL--KDVVAIAAGCEHSLALKKD---GTVWSWGNNYYGQLG- 380
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTS 267
+ + I S QV GL D+ V I+ S AL +G ++ WG G N +S
Sbjct: 381 NGNSIDSYVPVQVR-GLKDV--VAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSS 437
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V P + A G +H L DG V G + G L + + +V +
Sbjct: 438 FV--PVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSG-GYGQYYAVPV 494
Query: 328 EKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ + G+K V+ +AAG+ HS + ++ I WG HG LG
Sbjct: 495 Q----VKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLG 533
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 151/344 (43%), Gaps = 33/344 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG Q+ G D P + L V +A G + LAL +V ++
Sbjct: 166 VWCWGLNESIQVIDGSNKDFSVP--FQIKGLKDVVAIAAGKDYSLALKKDGTVW---MWE 220
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+ QL G D P PV +G + + I+AG HS + G ++ G+ +
Sbjct: 221 YKYNYYEQLRRG--ADEYSPVPVQV-EGLK-DVVAIAAGRYHSLALKKDGTVWAWGNNYY 276
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G PV+V + K+V IA G HSL L KD ++ +G + GQLG
Sbjct: 277 GQLGNGKSEDSYDPVQVKNL--KDVVAIAAGENHSLALKKD---GTIWAWGDNEWGQLGN 331
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
S + +P L D+ V I+A + S AL +G +++WG + ++ D
Sbjct: 332 SISE--KLCVPVQFKSLKDV--VAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDS 387
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + A G H L L DG V G + G L + SS P+ V
Sbjct: 388 YVPVQVRGLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQV---- 443
Query: 330 VSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
G+K V+ IAAG++HS ++ + WG E GQLG G+
Sbjct: 444 ----KGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGS 483
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 149/355 (41%), Gaps = 40/355 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG+ DGQLG R E S + + L V +A G + L L G V+
Sbjct: 115 VWAWGSNKDGQLGN-RDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKD-----GTVWC 168
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC--LFTCGDG 153
WG S Q+ G D P + + I+AG ++S + G ++
Sbjct: 169 WGLNESIQVIDGSNKDFSVPFQIKGLK----DVVAIAAGKDYSLALKKDGTVWMWEYKYN 224
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ QL G PV+V K+V IA G HSL L KD V+ +G+ GQL
Sbjct: 225 YYEQLRRGADEYSPVPVQVEGL--KDVVAIAAGRYHSLALKKD---GTVWAWGNNYYGQL 279
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NST 266
G S+D V + + ++V I+A + S AL +G ++ WG NS
Sbjct: 280 GNGKSEDSYDPVQVKNLK------DVVAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSI 333
Query: 267 SDVNC-PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S+ C P S A G H L L DG V G +++G L + + S P+ V
Sbjct: 334 SEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQV 393
Query: 326 ALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
G+K V+ IA G HS + ++ + WG E GQLG G P
Sbjct: 394 R--------GLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVP 440
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 150/351 (42%), Gaps = 34/351 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQ GT +E S + + L V +A G H L L G V++
Sbjct: 67 VWAWGWNHWGQCGT----EESSIIPVKVKGLKDVVAIAAGRYHSLTLKKD-----GTVWA 117
Query: 96 WGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG+ + + ++ P V + I+AG +S + G ++ G
Sbjct: 118 WGSNKDGQLGNRDAGEYSIVPVQVKGLK----DVVAIAAGDGYSLGLKKDGTVWCWGLNE 173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
Q+ G + S P ++ K+V IA G +SL L KD ++ + QL
Sbjct: 174 SIQVIDGSNKDFSVPFQIKGL--KDVVAIAAGKDYSLALKKDGT-VWMWEYKYNYYEQLR 230
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
D V P GL D+ V I+A S AL +G ++ WG + + D
Sbjct: 231 RGADEYSPV--PVQVEGLKDV--VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED 286
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + + A G NH L L DG + G + G L + S + L V ++
Sbjct: 287 SYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWGDNEWGQLGN----SISEKLCVPVQ 342
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
S D V+ IAAG EHS + ++ + +WG +GQLG GN+ D P
Sbjct: 343 FKSLKD---VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVP 390
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 100/265 (37%), Gaps = 60/265 (22%)
Query: 174 SFVNKNVHQIACGMRHSLVL-------------------------------LKDCLG--- 199
S + N+ QIA G HSL L LKD +
Sbjct: 42 SKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESSIIPVKVKGLKDVVAIAA 101
Query: 200 -----------NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
V+ +GS K GQLG ++D +P GL D +V I+A S
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLG-NRDAGEYSIVPVQVKGLKD--VVAIAAGDGYSL 158
Query: 249 ALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
L +G ++ WG + S D + P + A G ++ L L DG V M
Sbjct: 159 GLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWM 218
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
++ P+ V +E + + V+ IAAG HS + ++ + WG
Sbjct: 219 WEYKYNYYEQLRRGADEYSPVPVQVEGLKD-----VVAIAAGRYHSLALKKDGTVWAWGN 273
Query: 363 GEHGQLGLGNTCDQIHP-KVVNLGD 386
+GQLG G + D P +V NL D
Sbjct: 274 NYYGQLGNGKSEDSYDPVQVKNLKD 298
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG L RL P + + L V +A G H L L G V+
Sbjct: 570 VWAWGEVWFDLLNENSRLVYSSVP--VQIKGLKDVVAIAAGEHHSLGLKKD-----GTVW 622
Query: 95 SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GQLG+ +L P V I I+ G HS + G ++ G+
Sbjct: 623 AWGDNFFGQLGNSPREKYSLVPVQVKGLK----DILAIATGEWHSLAIKKDGTVWAWGEN 678
Query: 154 TFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ GQLG+ G + PV+V K+V I+ G HSL L KD V+G+G+ R
Sbjct: 679 STGQLGNETSGKDKYSYVPVQVKGI--KDVLAISAGSYHSLALKKD---GTVWGWGANAR 733
Query: 211 GQLGVSKDRIRSVSLPQVTI 230
GQLG + S QV I
Sbjct: 734 GQLGNGGAGVYSTVPVQVII 753
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 172/403 (42%), Gaps = 57/403 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V +WG+G DGQLG G +E + + +VS + G + LA+ + G++F+
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICA-----DGRLFT 67
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G LGH E P PV G +I + G H V D G + G
Sbjct: 68 WGWNQRGTLGHPPETKTESSPAPVDALAG--VSIVQAAIGGWHCLAVDDKGRAYAWGGNE 125
Query: 155 FGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+GQ G R P+ V Q+A G HS+VL +D V+ +G
Sbjct: 126 YGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQD---GHVWTWG 182
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
Q D I+ +S P GL +++++ + A + AL+ +G L+ WG G
Sbjct: 183 -----QPWPPGD-IKQISTPVRVQGLENVKVIAVGAF--HNLALTEDGILWAWGNNEYGQ 234
Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T D P+S P S LS A G H LT +GEV G HG L +
Sbjct: 235 LGTGDTQ-PRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDK 293
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
SS + +KV L G +IQ++ G HS +T + + ++G G+HG+LG G
Sbjct: 294 SS----HMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTG 349
Query: 378 HPKVVNL------------GDEFQNRDTQLEVFCGSGFTYAIS 408
HP V + G ++Q R V CG T AI+
Sbjct: 350 HPMEVPIDLPPPGTSGGDSGGQWQAR----YVACGGRHTLAIA 388
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 155/337 (45%), Gaps = 28/337 (8%)
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
P+S + V +WG G GQLG G + + + V D ++ + AG +S +
Sbjct: 5 PASSLPTAVLAWGSGEDGQLGMGGYEEEDWARGVAALDA--LAVSAVVAGSRNSLAICAD 62
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ SSP V + ++ Q A G H L + + Y
Sbjct: 63 GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK---GRAY 119
Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+G + GQ G +R R + +PQ +++ ++A G S L+ +GH
Sbjct: 120 AWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCA--PKLKVRQVAAGGTHSVVLTQDGH 177
Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
++TWG+ + ++ P + + A+G H L LT DG + G + +G L
Sbjct: 178 VWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGT 237
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG-N 372
+ ++P+ +V L + ++ IAAG HS +T+ + WG GEHG+LG G +
Sbjct: 238 GDTQPRSQPI-----RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDD 292
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P+ V L D ++V CG + A++R
Sbjct: 293 KSSHMVPQKVEL---LAGEDI-IQVSCGGTHSVALTR 325
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G G+LG G + PQ + L + + ++CGG H +ALT G++
Sbjct: 275 EVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTR-----DGRM 329
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTF 120
FS+GRG G+LG+G V +P V
Sbjct: 330 FSYGRGDHGRLGYGRKVTTGHPMEVPI 356
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 173/394 (43%), Gaps = 41/394 (10%)
Query: 1 MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDEL 56
+V + T K++ PKI +K +WSWG GQLG G + ++
Sbjct: 19 LVVVFLVSTLAVKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKH 78
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
SP + + LSS+ ++ G H +AL S G V++WG +GQLG G + P
Sbjct: 79 SP--VQVKHLSSIIVIDGGAWHSIALKSD-----GTVWAWGGNWAGQLGDGSYKSSNIPI 131
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
G I IS G H+ + G ++ G GQLG GD ++ P+++
Sbjct: 132 KTKELSG----IIAISCGGQHNLALKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGL- 186
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHD 234
N+ I+ G HSL + D ++ +GS QLG + +R V + +
Sbjct: 187 -NNIVAISAGGYHSLAIKSD---GSLWAWGSNNMEQLGDGSATNRCSPVHVSNLR----- 237
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGW 288
+I+ ++ GD S AL ++G + WG G +T++ N P ++ + A
Sbjct: 238 -DIIAVNGGGDFSLALKSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVSDVRDIIEIAAKG 296
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
NH L LT +G+V G + + RP V + ++++ VI IA G H+
Sbjct: 297 NHSLALTIEGKVWEFGSIGATPTEKEVTLPAYRP--VLVNEITD-----VIAIACGEFHN 349
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V+ + ++ WG GQLG G + P ++
Sbjct: 350 VVLKNDGSLWVWGINNFGQLGDGTVGSKTKPVLI 383
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 24/262 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
I+AG H+ + G L++ G +GQLG G ++ SPV+V ++ I G HS
Sbjct: 42 IAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKHSPVQVKHL--SSIIVIDGGAWHS 99
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ L D V+ +G GQLG +S ++P T L I+ IS G + AL
Sbjct: 100 IALKSD---GTVWAWGGNWAGQLG--DGSYKSSNIPIKTKELSG--IIAISCGGQHNLAL 152
Query: 251 SAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
++G ++ WG G + P +P + + G H L + DG + G
Sbjct: 153 KSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGLNNIVAISAGGYHSLAIKSDGSLWAWG 212
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
++ L D + P+ VSNL +I + G + S + + IM WG
Sbjct: 213 SNNMEQLGDGSATNRCSPV-----HVSNLR--DIIAVNGGGDFSLALKSDGTIMAWGSNG 265
Query: 365 HGQLGLGNTCDQIHPKVVNLGD 386
QLG G T ++ P VN+ D
Sbjct: 266 LSQLGDGTTTNRNTP--VNVSD 285
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 175/400 (43%), Gaps = 48/400 (12%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG+G G+LG G L + +P + + S S++ +ACGGAH L LT +VF+ G
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETR-----RVFATGL 108
Query: 99 GSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG ++ A+ P V+ D I HISAG+ HS ++ G L+ G + GQ
Sbjct: 109 NDCGQLGVSDVKSHAMDPLEVSGLD---KDILHISAGYYHSAAITVDGELYMWGKNSSGQ 165
Query: 158 LGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
LG G R P KV + + +A G HS+ + G +V +G G G+LG
Sbjct: 166 LGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGGSGRLGH 222
Query: 216 SKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
R S P++ L I++ ++A SA G + +G G
Sbjct: 223 GHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMG 282
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
F + P + + A G H V+T GE+ G + +G L S P
Sbjct: 283 FGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSP 342
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EHGQLGL 370
+ V + + V Q++ G +H+A +++N + TWGWG GQLG
Sbjct: 343 VRVEGPFLES----TVSQVSCGWKHTAAISDNN-VFTWGWGGSHGTFSVDGHSSGGQLGH 397
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G+ D P +V+LG + + + CG T A+ H
Sbjct: 398 GSDVDYARPAMVDLGKNVR----AVHISCGFNHTAAVLEH 433
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA-----E 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTLA----PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 148 FTCGDGTF------GQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCL 198
C + F G++ Y S + +P V ++N+ +IA H L L
Sbjct: 456 IACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLAL---AA 512
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE----IVGISANGDRSAALSAEG 254
+VY +G G G+LG D + + P+V + +V I+ SAA++AEG
Sbjct: 513 TGEVYSWGCGDGGRLG-HGDTV-PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570
Query: 255 HLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTGDGEVLMLG 304
LYTWGRG S+ D P + L A G L +T +G+V G
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+G L P +EK+ +LD V+++ G++ S +T++ + +WG G+
Sbjct: 631 DGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 365 HGQLGLGNTCDQIHPKVVN 383
+ +LG G +PK++
Sbjct: 686 NQRLGHGTEEHVRYPKLLE 704
>gi|397614675|gb|EJK62945.1| hypothetical protein THAOC_16425, partial [Thalassiosira oceanica]
Length = 619
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 181/400 (45%), Gaps = 55/400 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLS---SVSMLACGG-----AHVLALTSPSSVI 89
+WG G GQLG G+ DE P+L+ L S+ + +A GG AH L LTS
Sbjct: 145 AWGVGARGQLGNGKREDEAEPKLM-LGSIGWGVRIVQVAAGGGLVRVAHSLLLTST---- 199
Query: 90 GGKVFSWGRGSSGQLGHG-----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G+V S+G G LGHG + D L PK + G + + ++AG HSG V++
Sbjct: 200 -GRVLSFGTAQYGALGHGYDQGKTLSDVLRPKYIEALRGEK--VVCVAAGELHSGAVTED 256
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G ++T G+G GQLG GD R H P +V+ ++ V I+ G RH+LV D +V
Sbjct: 257 GDVYTWGEGFCGQLGLGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLVATDD---GEV 313
Query: 203 YGFGSGKRGQLGVS-KDRIRSVSLPQVTIGLHDIEIVGISANG------DRSAALSAEGH 255
+ +G G+ G LG S D + + V D ++ G++A + A + A
Sbjct: 314 FSWGLGRFGVLGRSYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQAAAE 373
Query: 256 -------LYTWGRGFNSTSDVNCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLM 302
L + N T D Q +P + + + G H +VL G +
Sbjct: 374 DGVPFDALISSLDALNLTLDDPSTQCIPGRVDALEGIRAVGVSAGHRHSMVLDEHGGLYT 433
Query: 303 LGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + P+ V A EK D V++ Q++AG + S V + +WG
Sbjct: 434 FGSGAGGALGHGDLFGQEFPVRVSAFEK----DAVEIHQMSAGVDVSMAVDTRGNVYSWG 489
Query: 362 WGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCG 400
G++GLG + + P+ V++GD ++V CG
Sbjct: 490 KRADGRIGLGIIEENVKVPRKVDVGDPLFR---AVDVECG 526
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 96/245 (39%), Gaps = 32/245 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
V++WG G GQLG G L P+ + L V+ ++ G H L T G+V
Sbjct: 259 VYTWGEGFCGQLGLGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLVATDD-----GEV 313
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFF--DGHRYTITHISA---------------GWN 136
FSWG G G LG D Y + DG + ++A
Sbjct: 314 FSWGLGRFGVLGR-SYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQAAA 372
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
G D+ L + D L D + P +V + ++ G RHS+VL +
Sbjct: 373 EDGVPFDA--LISSLDAL--NLTLDDPSTQCIPGRVDALEGIRAVGVSAGHRHSMVLDEH 428
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+Y FGSG G LG + + +EI +SA D S A+ G++
Sbjct: 429 ---GGLYTFGSGAGGALGHGDLFGQEFPVRVSAFEKDAVEIHQMSAGVDVSMAVDTRGNV 485
Query: 257 YTWGR 261
Y+WG+
Sbjct: 486 YSWGK 490
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 177/399 (44%), Gaps = 51/399 (12%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNL---SSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
WG G G+LG G L SP + + + LACGGAH L LT G+VF+
Sbjct: 33 WGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQ-----NGRVFA 87
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GQLG G V + +PV G + +SAG +HS V+ G LF G +
Sbjct: 88 TGLNDFGQLGIGTSVTHML-EPVE-ISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 145
Query: 156 GQ--LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQ LG G + S+P KV + V +A G HS+ + ++ +V +G+ G+L
Sbjct: 146 GQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEE---GEVLSWGAAGSGRL 202
Query: 214 GVSKD-RIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RG 262
G + I SL P++ I+I I+A SA + +G L+ +G +G
Sbjct: 203 GHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKG 262
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSST 320
F ++ P + + A G H V+T G++ G + +G L + V S
Sbjct: 263 FGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSP 322
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EHGQL 368
L +L K + V +++ G +H+AVV+ + I TWGWG GQL
Sbjct: 323 EILKSSLFK------LPVSKVSCGWKHTAVVSGDD-IYTWGWGGANGTFFEEGHSSGGQL 375
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
G GN D P +V G + + V CG T AI
Sbjct: 376 GHGNDVDYFEPMMVPFGTNAR----AVHVSCGFNHTGAI 410
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 161/349 (46%), Gaps = 38/349 (10%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS-----GQLGHGE 108
D+L P+ + + V ++ G H L T G + S+G GS+ G+LGHG+
Sbjct: 96 DKLRPKCVEALARERVRDVSAGLYHSLVATKD-----GGLLSFGYGSANVVVDGRLGHGD 150
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
+ P+PV G R I ++AG +HS +SD G +F+ G G G LGHGD
Sbjct: 151 QRTQMIPRPVLSLSGVR--IVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV 208
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P +SS + V IA G HSLV+ + VY FG G G LG + V P+
Sbjct: 209 PKLISSLQREKVVDIAAGSAHSLVVAES---GDVYSFGLGSEGALGHGDTDMSLV--PKK 263
Query: 229 TIGLHDIEIVGISANGDRSAALSA------EGHLYTWGRGFNSTSDVNCPQ-----SLPS 277
V ++A G S LS EG + ++G+ NS + + P+
Sbjct: 264 IEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQ--NSYGQLGLGHFSRMIASPA 321
Query: 278 SLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ AA+ G +H LVLT DG V G + HG L + ++ + +L
Sbjct: 322 QVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTL----IQSL 377
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ +++ +AAG S V++ + ++G G++G+LG G+ + P VV
Sbjct: 378 ERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVV 426
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 156/335 (46%), Gaps = 35/335 (10%)
Query: 36 VWSWGAGT-----DGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
+ S+G G+ DG+LG G ++ P+ +L+LS + V + A G H L L+
Sbjct: 130 LLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKV-AAGAHHSLVLSDQ---- 184
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G VFS+G G G LGHG+ L PK ++ R + I+AG HS V++SG +++
Sbjct: 185 -GNVFSFGVGIDGSLGHGDQARQLVPKLISSL--QREKVVDIAAGSAHSLVVAESGDVYS 241
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ---VYGFG 206
G G+ G LGHGD P K+ FV + ++A G HSLVL K + Q V FG
Sbjct: 242 FGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFG 301
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
GQLG+ S QV + +E I A S L+ +G +Y++G
Sbjct: 302 QNSYGQLGLGHFSRMIASPAQVQVEAAAVE---IEAGAHHSLVLTNDGRVYSFGLAQHGQ 358
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + N +L SL + A G N LVL+ +G V G +G L +
Sbjct: 359 LGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDES 418
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++T+P V G V I+AG HS VV
Sbjct: 419 NATQPTVVFAA------GHTVSAISAGYSHSLVVV 447
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 164/343 (47%), Gaps = 43/343 (12%)
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
++ G V S+G GHG+ VD L PK V R + +SAG HS + G L
Sbjct: 75 LVAGNVVSFGLADPS--GHGDHVDKLRPKCVEALA--RERVRDVSAGLYHSLVATKDGGL 130
Query: 148 FTCGDGTF-----GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+ G G+ G+LGHGD R+ P V S + ++A G HSLVL GN V
Sbjct: 131 LSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQ--GN-V 187
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ FG G G LG D+ R + +P++ L ++V I+A S ++ G +Y++G G
Sbjct: 188 FSFGVGIDGSLG-HGDQARQL-VPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLG 245
Query: 263 FNST-----SDVN-CPQSLPSSLSFS--QAALGWNHVLVLTG------DGEVLMLGGSHH 308
+D++ P+ + + + A G +H LVL+ +G VL G + +
Sbjct: 246 SEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSY 305
Query: 309 GMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R+ ++ P V +E + ++I AGA HS V+T + + ++G +HG
Sbjct: 306 GQLGLGHFSRMIAS-PAQVQVEAAA-------VEIEAGAHHSLVLTNDGRVYSFGLAQHG 357
Query: 367 QLGLGNTC-DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
QLG GN D P ++ + R+ ++V G+ F+ +S
Sbjct: 358 QLGHGNDLRDNPEPTLI----QSLERERIVDVAAGNNFSLVLS 396
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+S+G GQLG G L D P L+ + +A G L L++ G V
Sbjct: 347 RVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAE-----GTV 401
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
FS+G G +G+LG G+ +A P V F GH T++ ISAG++HS
Sbjct: 402 FSFGCGKNGRLGKGDESNATQPT-VVFAAGH--TVSAISAGYSHS 443
>gi|348512897|ref|XP_003443979.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oreochromis niloticus]
Length = 393
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 171/375 (45%), Gaps = 49/375 (13%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
GA + GQL G + D+ SP+L N+++L + V ++ GG H + +T G+VF G
Sbjct: 3 GANSYGQLSQGHVEDQASPRLSNIAALQNRPVRAISGGGGHSVVITES-----GEVFVCG 57
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
+ + GQLG G D + + +T I+ GW+ + ++D G L CG FGQ
Sbjct: 58 QNNRGQLGLGHSADISTLQHCPILN---QRVTDIACGWDFTLLLTDGGQLLACGSNVFGQ 114
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGV 215
LG G +HS+ + V + + V +A G+RHSL + VY +G+G + +
Sbjct: 115 LGVGQTVTHSADLLVVESLMEPVVSVAAGLRHSLAVTGS---GCVYQWGTGLFSYAKRAL 171
Query: 216 SKDRIRS---VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
S + S +P + GL ++A L+ +G L+ WG N +
Sbjct: 172 SPHAVPSHFNSKVPCLVPGLDQRISHRVTAGSAHCVCLTGDGDLFLWGS--NKHGQLTTT 229
Query: 273 QSLPSSLSFSQAAL-----------GWNHVLVLTGDGEVLMLGGSHHGML---------- 311
+S SS + + +L GW H++ T G V G ++G L
Sbjct: 230 ESFLSSPTLLKRSLLDGEKVINVWSGWTHIVAQTESGRVFTWGRGNYGQLGRQISASEDT 289
Query: 312 ----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+ P T+ + + E V NL G QI G+EH+ + + ++++WGW EHG
Sbjct: 290 EQQPAGPVAQGGTQEVGLPAE-VENLRGAT--QICCGSEHN-LASVGGSLLSWGWNEHGM 345
Query: 368 LGLGNTCDQIHPKVV 382
G G+ + P++V
Sbjct: 346 CGDGSQANVFLPQLV 360
>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 1011
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 143/290 (49%), Gaps = 31/290 (10%)
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG+ + QL G++ P+ V F + ++++ G N + ++D+G +++ G
Sbjct: 192 YQWGQMFTTQLSLGKVST---PQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLC 248
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
++G+LG P ++ NK + QIACG HSL L D +G VY +G+G G+L
Sbjct: 249 SYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLAL--DEIGC-VYAWGNGAGGRL 305
Query: 214 GVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR----------- 261
G++K + VSLP + D +++VGI+ D S A+ +G +++WG+
Sbjct: 306 GLNKTDV--VSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGYSNP 363
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
GF ST P+ + S + Q + G H L LT G+V G + G +
Sbjct: 364 MGFQST-----PRRVESIPACKQVSCGNWHSLTLTNGGDVYAFGSNREGRCGRELTTVES 418
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
P V + +K+ +I AG +AV+T + I TWG + GQLG+
Sbjct: 419 PPNRVIFDA-----NIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLGV 463
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 149/354 (42%), Gaps = 58/354 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++SWG + G+LG +D P Q++ L + ++ +ACG H LAL G V+
Sbjct: 242 IYSWGLCSYGKLGQYSKNDCPIPSQIMELKN-KQITQIACGKDHSLALDEI-----GCVY 295
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G+ G+LG + P V F + + I+ G +HS V G +F+ G
Sbjct: 296 AWGNGAGGRLGLNKTDVVSLPTMVAHFPD-QVKVVGIACGQDHSMAVCQDGRVFSWGQAG 354
Query: 155 FGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FG+LG+ + S+P +V S Q++CG HSL L G VY FGS + G+
Sbjct: 355 FGKLGYSNPMGFQSTPRRVESI--PACKQVSCGNWHSLTLTN---GGDVYAFGSNREGRC 409
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----------- 262
G + S P I +I+I I A + +A L+ +YTWG
Sbjct: 410 GRELTTVESP--PNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLGVLIET 467
Query: 263 ------------------------FNSTSDVNCPQSLPSSLSF--SQAALGWNHVLVLTG 296
N T PQ + + L + + +G+ HV+VLT
Sbjct: 468 KSNSTNNSRNNNNNNNYISVYAATLNDTYTY-VPQLVKTLLPYPINNIEVGYEHVVVLTD 526
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
GEV+ G + L E + + KV + V +IAAG S V
Sbjct: 527 AGEVITFGSNQMDQLGHGELLRD----AGTFRKVEIQNKSTVFKIAAGNYASLV 576
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIE--IVGISANGDRSAALSAEGHLYTWGR----GFN 264
GQ+ ++ + VS PQ + H E + + G+ + L+ G +Y+WG
Sbjct: 195 GQMFTTQLSLGKVSTPQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLCSYGKLG 254
Query: 265 STSDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
S +CP +PS + +Q A G +H L L G V G G L ++
Sbjct: 255 QYSKNDCP--IPSQIMELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLG----LN 308
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
T +S+ D VKV+ IA G +HS V ++ + +WG G+LG N
Sbjct: 309 KTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGYSN 362
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL---YTWGRGFN---STSDVNCPQ 273
I ++S Q+T+ L S G +A+ + E + Y WG+ F S V+ PQ
Sbjct: 156 IAAISTSQLTVELPK----NFSIKGHHNASPNTENPISPFYQWGQMFTTQLSLGKVSTPQ 211
Query: 274 SLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
++ S G N L+LT G + G +G L + P +
Sbjct: 212 TVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIP-----SQ 266
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ L ++ QIA G +HS + E + WG G G+LGL T
Sbjct: 267 IMELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLGLNKT 310
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++G+ +G+ G E P + + + + G LT+ +++
Sbjct: 398 VYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTT-----SNMIYT 452
Query: 96 WGRGSSGQLG--------------------------HGEMVDALYPKPVTFFDGHRYTIT 129
WG GQLG + D P Y I
Sbjct: 453 WGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLPYPIN 512
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-VHQIACGMR 188
+I G+ H ++D+G + T G QLGHG+ + + NK+ V +IA G
Sbjct: 513 NIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGELLRDAGTFRKVEIQNKSTVFKIAAGNY 572
Query: 189 HSLVLLKDCLGNQVYG 204
SLV L G+ ++G
Sbjct: 573 ASLVSLSS--GHSIFG 586
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 169/382 (44%), Gaps = 57/382 (14%)
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD---ALYPKPVTFFD 122
L + ++LACG H + V G V++WGR G+LG G+++ P V
Sbjct: 771 LPTQNVLACGQDHA------AIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLH 824
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
H + ++ G H+ V+ G L++ G ++GQLG GD HS PV V + +
Sbjct: 825 MHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLS 884
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
+ACG H+LVL +D +++ FG G GQLG +D+I LP++ L IVGI
Sbjct: 885 VACGQLHTLVLTQD---QRLWSFGWGVHGQLGHGDVEDQI----LPKLVNQLSKCAIVGI 937
Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVL 292
SA S AL+ +G ++ +G G S P L SS S G+ +
Sbjct: 938 SAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNI 997
Query: 293 VLTGDGE--------------VLMLGGSHHGMLS----DPERVSSTRPLSVALEKVSNLD 334
+T + + L L H DP + TR S+ LE L
Sbjct: 998 AITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLP 1057
Query: 335 GVKVIQIAAGAE-------HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+ I A + H ++T + +WG E GQLG+GN Q P ++N
Sbjct: 1058 SLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLIN---- 1113
Query: 388 FQNRDTQ-LEVFCGSGFTYAIS 408
++RD Q + V GS F+ A++
Sbjct: 1114 -RSRDDQFVAVAAGSRFSLAVN 1134
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 44/329 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++SWG+ + GQLG G + P + S +ACG H L LT +++
Sbjct: 848 KLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQDQ-----RLW 902
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G G GQLGHG++ D + PK V + I ISAG+ HSG +++ G ++ G +
Sbjct: 903 SFGWGVHGQLGHGDVEDQILPKLVNQLS--KCAIVGISAGYAHSGALTNDGQVWMFGSSS 960
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK---RG 211
FGQLG G + PV++ + + +V + CG ++ + + +VY +G R
Sbjct: 961 FGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSN--PQKVYTWGKSPLELRQ 1018
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG-HLYTWGRGFNSTSDVN 270
L +++ R +S + R +L E HL
Sbjct: 1019 ALQLARKRHQSSRYSNPDPHHQTVT---------RLPSLPLENQHLL------------- 1056
Query: 271 CPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P +P+++ + + NH L+LT G++ G + G L RVS + P+ +
Sbjct: 1057 -PSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRS 1115
Query: 329 KVSNLDGVKVIQIAAGAEHS-AVVTENRA 356
+ + + +AAG+ S AV +N+A
Sbjct: 1116 RDD-----QFVAVAAGSRFSLAVNYQNQA 1139
>gi|307194573|gb|EFN76865.1| Secretion-regulating guanine nucleotide exchange factor
[Harpegnathos saltator]
Length = 385
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 178/377 (47%), Gaps = 47/377 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVI 89
K+ SWGA + GQLG G L ++ + P+ ++LS SV + GG H L L +
Sbjct: 5 KLISWGANSHGQLGQGVLSEQCVLPKEIDLSGCDLRPESVKKIVGGGGHTLILDTE---- 60
Query: 90 GGKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+V+S GR GQ G + E + L + ++ DG T+ + GW+ S ++ G L
Sbjct: 61 -GRVYSCGRNDKGQAGVSNTERTNVLTFQRLSL-DGK--TMIDVCCGWDTSAALTKDGDL 116
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G +GQLG S+ + + + V +I+ G+RH++V+ + V G+
Sbjct: 117 YLWGSNRYGQLGDDPSIHSSTSSPICTIQSGKVKRISMGLRHTVVVTDN---GTVLVCGA 173
Query: 208 GKRGQLGVSKDRIRSVSLPQ--VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
+GQLG++ + + T GL D++ V + A L+ +G T+ G N
Sbjct: 174 NSKGQLGLTNMESKQSRDVRHCFTAGLTDVDHVACGEHHTVVATLN-KGTFTTYFFGDNK 232
Query: 266 TSDV-----NCPQSLP--------SSLSFS-QAALGWNHVLVLTGDGEVLMLGGSHHGML 311
C + P S S S Q GW+H +L+ DG V G + +G L
Sbjct: 233 HGQAGIDPRECTRICPAYRFVRCDSRFSVSIQIHAGWSHTNILS-DGAVYSWGRNSYGQL 291
Query: 312 ----SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
S+ E S R +++V NL K++Q++ G+EH+ + E I WGW EHG
Sbjct: 292 GRGQSEEEGCESWR-----MQRVENLP--KIVQLSVGSEHNVALAETGTIFCWGWNEHGN 344
Query: 368 LGLGNTCDQIHPKVVNL 384
G GNT D + P+ + L
Sbjct: 345 CGNGNTKDVLLPERLPL 361
>gi|115496664|ref|NP_001069489.1| secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
gi|117940126|sp|Q3MHW0.1|SRGEF_BOVIN RecName: Full=Secretion-regulating guanine nucleotide exchange
factor
gi|75773727|gb|AAI04611.1| Secretion regulating guanine nucleotide exchange factor [Bos
taurus]
gi|296480129|tpg|DAA22244.1| TPA: secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
Length = 464
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 178/420 (42%), Gaps = 51/420 (12%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHV 79
+P+ E +++WGA + GQLG G D LS Q L + + + GG H
Sbjct: 2 EPEPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHS 61
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T G +F G GQLG G + LY P G I ++ GW+ +
Sbjct: 62 AVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG--CAIQQVACGWDFTI 114
Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++++G + +CG +FGQLG HG R + + + V IA G+RH+L
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVIP--QAIELLREKVVSIAAGLRHALAATAS- 171
Query: 198 LGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
V+ +G SG+R G + + P GL + + V + A D SA+L+
Sbjct: 172 --GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTD 229
Query: 253 EGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLML 303
G LY WG + + + PQ + + ++ AA+ GW H++ T G+V
Sbjct: 230 AGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--------------VKVIQIAAGAEHSA 349
G + +G L R TR + ++ +L G +I+ G+EH+
Sbjct: 290 GRADYGQLG---RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNL 346
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V +WGW EHG G G D PK V F L V CG+G + A+ +
Sbjct: 347 AVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLG----LHVGCGAGHSLALCQ 401
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 172/403 (42%), Gaps = 57/403 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V +WG+G DGQLG G +E + + +VS + G + LA+ + G++F+
Sbjct: 13 VLAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICA-----DGRLFT 67
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G LGH E P PV G +I + G H V D G + G
Sbjct: 68 WGWNQRGTLGHPPETKTESSPAPVDALAG--VSIVQAAIGGWHCLAVDDKGRAYAWGGNE 125
Query: 155 FGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+GQ G R P+ V Q+A G HS+VL +D V+ +G
Sbjct: 126 YGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQD---GHVWTWG 182
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
Q D I+ +S P GL +++++ + A + AL+ +G L+ WG G
Sbjct: 183 -----QPWPPGD-IKQISTPVRVQGLENVKVIAVGAF--HNLALTEDGILWAWGNNEYGQ 234
Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T D P+S P S LS A G H LT +GEV G HG L +
Sbjct: 235 LGTGDTQ-PRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDK 293
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
SS + +KV L G +IQ++ G HS +T + + ++G G+HG+LG G
Sbjct: 294 SS----HMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTG 349
Query: 378 HPKVVNL------------GDEFQNRDTQLEVFCGSGFTYAIS 408
HP V + G ++Q R V CG T AI+
Sbjct: 350 HPMEVPIDLPPPGTSGGDSGGQWQAR----YVACGGRHTLAIA 388
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 154/337 (45%), Gaps = 28/337 (8%)
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
P+ + V +WG G GQLG G + + + V D ++ + AG +S +
Sbjct: 5 PAFSLPTAVLAWGSGEDGQLGMGGYEEEDWARGVAALDA--LAVSAVVAGSRNSLAICAD 62
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ SSP V + ++ Q A G H L + + Y
Sbjct: 63 GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK---GRAY 119
Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+G + GQ G +R R + +PQ +++ ++A G S L+ +GH
Sbjct: 120 AWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCA--PKLKVRQVAAGGTHSVVLTQDGH 177
Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
++TWG+ + ++ P + + A+G H L LT DG + G + +G L
Sbjct: 178 VWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGT 237
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG-N 372
+ ++P+ +V L + ++ IAAG HS +T+ + WG GEHG+LG G +
Sbjct: 238 GDTQPRSQPI-----RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDD 292
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ P+ V L D ++V CG + A++R
Sbjct: 293 KSSHMVPQKVEL---LAGEDI-IQVSCGGTHSVALTR 325
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G G+LG G + PQ + L + + ++CGG H +ALT G++
Sbjct: 275 EVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTR-----DGRM 329
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTF 120
FS+GRG G+LG+G V +P V
Sbjct: 330 FSYGRGDHGRLGYGRKVTTGHPMEVPI 356
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 180/400 (45%), Gaps = 41/400 (10%)
Query: 1 MVAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL 60
MVA ++ T G + ++ + P + +WG GQLG G + +P
Sbjct: 31 MVAVVLGITSVGAARVLAQSVPSAAAGTPGTGL----AWGFNALGQLGDGTTTNRNTPVT 86
Query: 61 LNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
++L + ++++ +A G H LA+TS S+++ +WG + GQLG G + P V
Sbjct: 87 VDLPADTTITAIAAGVNGHSLAVTSASTML-----AWGFNTWGQLGDGTTTNRNTPVAVD 141
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
G TIT I+AG +HS V+ +G + G + GQLG G + ++PV V
Sbjct: 142 LPTG--TTITAIAAGKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTNRNTPVAVDLPTGTT 199
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDI 235
+ IA G HSL L + +G GQLG +++ +V LP T
Sbjct: 200 ITAIAAGNGHSLALTS---AGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPTGT------ 250
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQS--LP-SSLSFSQAAL 286
I ++ G S A+++ G + WG F +T++ N P + LP + + A
Sbjct: 251 TITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGG 310
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA--G 344
G H L T G +L G + G L D + + P++V L G + IAA G
Sbjct: 311 GGGHSLAATSTGTMLAWGLNSFGQLGDGTTSNRSTPVTVDLPA-----GTTITAIAAGGG 365
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ HS T ++ WG GQLG G T ++ P V+L
Sbjct: 366 SGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTPVTVDL 405
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 77/208 (37%), Gaps = 48/208 (23%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG------- 90
+WG T GQLG G + +P ++L + ++++ LA GG H LA+TS +++
Sbjct: 221 AWGENTWGQLGDGTTTNRNTPVTVDLPTGTTITALAGGGGHSLAVTSTGTMLAWGFNFWG 280
Query: 91 -----------------------------------------GKVFSWGRGSSGQLGHGEM 109
G + +WG S GQLG G
Sbjct: 281 QLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGHSLAATSTGTMLAWGLNSFGQLGDGTT 340
Query: 110 VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
+ P V G T G HS + +G + G T GQLG G + S+P
Sbjct: 341 SNRSTPVTVDLPAGTTITAIAAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRSTP 400
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDC 197
V V + + G HSL ++
Sbjct: 401 VTVDLPAGTTITAVTAGGFHSLAIVPST 428
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 49/340 (14%)
Query: 93 VFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
V +WG G GQLG G +V AL P Y + + AG +S + D
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCIVKALEP----------YKVRSVVAGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ + P +V + N N+ Q A G H L + D G + Y
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAV--DDQG-RAY 113
Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+G + GQ G +R R + +PQ + + ++A G S L+ EGH
Sbjct: 114 AWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCA--SKLVVRQVAAGGTHSVVLTREGH 171
Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
+++WG+ + ++ P + A+G H L L DG + G + +G L
Sbjct: 172 VWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGT 231
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ ++P++V L G+ ++ IAAG HS +T++ + WG GEHG+LG G+
Sbjct: 232 GDTQPRSQPITV-----QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 286
Query: 374 --CDQIHPKVVNL--GDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL G++ ++V CG + A++R
Sbjct: 287 DKSSKMVPQRVNLLVGEDI------VQVSCGGTHSVALTR 320
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 44/367 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ ++ V + G + LA+ GK+F+WG
Sbjct: 9 AWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDD-----GKLFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V I + G H V D G + G +G
Sbjct: 64 WNQRGTLGHPPETKTENIPSQVKAL--ANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSHSS--PVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
Q G R + P++ + + V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTRE---GHVWSWG-- 176
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNS 265
Q D I+ +S+P GL + ++ + A + AL +G L+ WG G
Sbjct: 177 ---QPWPPGD-IKQISVPVRVQGLERVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQLG 230
Query: 266 TSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--DPERV 317
T D P+S P S L+ A G H LT DGEV G HG L D ++
Sbjct: 231 TGDTQ-PRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 289
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
S P ++V+ L G ++Q++ G HS +T + + T+G G+HG+LG G
Sbjct: 290 SKMVP-----QRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTG 344
Query: 378 HPKVVNL 384
P V +
Sbjct: 345 QPMEVPI 351
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 146/344 (42%), Gaps = 41/344 (11%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG G LG E P + + ++ A GG H LA+ G+
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQ-----GRA 112
Query: 94 FSWGRGSSGQLGHGEMVDALYPKP------VTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
++WG GQ G +P + + + ++AG HS ++ G +
Sbjct: 113 YAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHV 172
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
++ G GD + S PV+V + V IA G H+L L +D ++ +G+
Sbjct: 173 WSWGQ----PWPPGDIKQISVPVRVQGL--ERVRLIAVGAFHNLALQED---GTLWAWGN 223
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ GQLG + RS P GL + +V I+A G S AL+ +G +Y WGRG
Sbjct: 224 NEYGQLGTGDTQPRS--QPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRL 281
Query: 264 ----NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
N S PQ +L Q + G H + LT DG + G HG L +V
Sbjct: 282 GFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKV 341
Query: 318 SSTRPLSVALE--KVSNL----DGVKVIQ--IAAGAEHSAVVTE 353
++ +P+ V ++ NL D + I +A+G H+ + E
Sbjct: 342 TTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVE 385
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 128/297 (43%), Gaps = 40/297 (13%)
Query: 35 KVWSWGAGTDGQLG--------TGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
+ ++WG GQ G TGR D + PQ +S V +A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQ--RCASKLVVRQVAAGGTHSVVLTR 168
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G V+SWG+ G++ P V + R I+ G H+ + +
Sbjct: 169 E-----GHVWSWGQ----PWPPGDIKQISVPVRVQGLERVRL----IAVGAFHNLALQED 215
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G L+ G+ +GQLG GD + S P+ V + IA G HS L D +VYG
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDD---GEVYG 272
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
+G G+ G+LG + S +PQ L +IV +S G S AL+ +G +YT+GRG
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDH 332
Query: 263 --------FNSTSDVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
+ + P + P +L+ S A W LV +G L + H G
Sbjct: 333 GRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVEWHTG 389
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 159/362 (43%), Gaps = 30/362 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ ++ WG + GQLG G + DE L P + + + +ACG H L LT+ G
Sbjct: 1 MDLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTA-----NG 55
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
KV++ G QLGH + +P+ + Y + I+ G HS +++ G + + G
Sbjct: 56 KVYACGNNDQAQLGH----NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWG 111
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
D GQLG D P + S V+K+V QIACG HSL L C ++Y +GS
Sbjct: 112 DNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLA-LTSC--GELYSWGSNIY 168
Query: 211 GQLGVS-KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQLGV + + P L I + I+ G+ S +S ++ +GR G
Sbjct: 169 GQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228
Query: 264 NSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N S+ P L + +L A G + LT +G V G +G L +
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML 288
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L G + Q+A G H+ + +R + +G G GQLG +T P+
Sbjct: 289 P-----RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQ 343
Query: 381 VV 382
V
Sbjct: 344 EV 345
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS--PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIG 90
+++SWG+ GQLG + ELS L L++L + + +ACGG H ++ S+V G
Sbjct: 159 ELYSWGSNIYGQLGV-KPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFG 217
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+GR + GQLG + + YP + + ++ G S F+++ G +FTC
Sbjct: 218 -----FGRNNCGQLGLNDESNRAYPTQLKTL--RTLGVRFVACGDEFSVFLTNEGGVFTC 270
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GT+GQLGHG + P V + + Q+ACG RH+L L+ +VYGFG G
Sbjct: 271 GAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPS--RGRVYGFGLGSS 328
Query: 211 GQLGVSKDRIRSVSLPQVTIG 231
GQLG SV+LPQ +G
Sbjct: 329 GQLG--NRSTNSVTLPQEVLG 347
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 37/267 (13%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
LF G+ + GQLG G P ++ + + QIACG RH+L L + +VY
Sbjct: 3 LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTAN---GKVYA 59
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
G+ + QLG + R + +P+ L + +V I+ S AL+ G + +WG
Sbjct: 60 CGNNDQAQLGHNLPTKRPLLIPE----LQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115
Query: 263 -----FNSTSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGML--SD 313
S + P+ + S +S Q A G NH L LT GE+ G + +G L
Sbjct: 116 GQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKP 175
Query: 314 PERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P+ +S PL +++ L G+ + IA G HS +++++ A+ +G GQLGL +
Sbjct: 176 PQELSHCNYPL-----RLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLND 230
Query: 373 TCDQIHP-----------KVVNLGDEF 388
++ +P + V GDEF
Sbjct: 231 ESNRAYPTQLKTLRTLGVRFVACGDEF 257
>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
of chromosome condensation (RCC1) domains and a PF|01363
FYVE Zinc finger domain [Arabidopsis thaliana]
gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1006
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 179/396 (45%), Gaps = 50/396 (12%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WGA T G+ +D LSP+LL +++ V ++ G H +T G+VF WG
Sbjct: 264 WGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQ-----GEVFCWGN 318
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--DGTFG 156
G+SG+LG +D +PK V + + ++ + + V++SG L+ G GT
Sbjct: 319 GNSGKLGLKVNIDIDHPKRVESLED--VAVRSVACSDHQTCAVTESGELYLWGIDGGTIE 376
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
Q G S V S V +ACG H+ ++ Q++ +GSG G LG
Sbjct: 377 QSGSQFLTRKISDVLGGSLT---VLSVACGAWHTAIVTS---SGQLFTYGSGTFGVLG-- 428
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGIS------------ANGDRSAALSAEGHLYTWGRGFN 264
+ SV+ P+ L ++++ +S AN + + G L+TWG G
Sbjct: 429 HGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDK 488
Query: 265 ST---SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+D + +P+ ++ F + + GW + L+ G V +G S HG L P
Sbjct: 489 GRLGHADSK-RKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPR 547
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ + ++V L NL V IA+G+ H AV+T + TWG G +GQLGLG+ D
Sbjct: 548 --AKDKSVNVVL---GNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRD 602
Query: 376 QIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ P +V LGD + CG T AI H
Sbjct: 603 RNSPVLVEPLGDRLVE-----SIACGLNLTAAICLH 633
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 12/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS-------S 87
+++++G+GT G LG G L P+ + V ++CG H A+ + +
Sbjct: 415 QLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNA 474
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
GK+F+WG G G+LGH + L P VT H + +S GW + +S SG +
Sbjct: 475 KSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFI--KVSCGWTLTVALSISGTV 532
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG + S V + + + V IA G H VL GN VY +G
Sbjct: 533 YTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTS--FGN-VYTWGK 589
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G GQLG+ R R+ + +G +E + N + L E L
Sbjct: 590 GMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISL 638
>gi|426245676|ref|XP_004016632.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Ovis aries]
Length = 538
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 182/437 (41%), Gaps = 60/437 (13%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQV---VKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSS 65
++G+ N P E + V +++WGA + GQLG G D LS Q L +
Sbjct: 62 KRGRPTASRNPSPAWPEPHSLEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCK 121
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
+ + GG H +T G +F G GQLG G + LY P G
Sbjct: 122 SGCIKQITGGGGHSAVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG-- 174
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I ++ GW+ + ++++G + +CG +FGQLG + + + V IA
Sbjct: 175 CAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPRGPRRCVIPQAIELLREKVVSIAA 234
Query: 186 GMRHSLVLLKDCLGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
G+RH+L V+ +G SG+R G + + P GL + + V +
Sbjct: 235 GLRHALAATAS---GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV 291
Query: 241 SANGDRSAALSAEGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHV 291
A D SA+L+ G LY WG + + + PQ + + ++ AA+ GW H+
Sbjct: 292 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEAHCFQNEKIAAVWSGWTHL 351
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--------------VK 337
+ T G+V G + +G L R TR + ++ +L G
Sbjct: 352 VAQTVTGKVFTWGRADYGQLG---RTVETREGWQSEKQDPSLPGSGPQKGTPSCLPCLTG 408
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-----NLGDEFQNRD 392
+I+ G+EH+ V +WGW EHG G G D PK V +LG
Sbjct: 409 ATEISCGSEHNLAVIRG-VCHSWGWNEHGMCGDGTEADVWAPKPVPGLPSSLG------- 460
Query: 393 TQLEVFCGSGFTYAISR 409
L V CG+G + A+ +
Sbjct: 461 --LHVGCGAGHSLALCQ 475
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 25/256 (9%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
S L+ G H A+T G V++WG+G GQLGHG+ VD + P+PV G +
Sbjct: 276 SALSFGAGHCAAVTD-----TGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE---VK 327
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN--KNVHQIACGM 187
+SAG+ H+ V+ G LFT GDG G+LGH D P V++F+ V G
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+LVL + QV+ FGSG G+LG D + P L V I+A S
Sbjct: 388 SHTLVLNRR---GQVFSFGSGDSGRLGHGNDNDQWS--PTFLSALESERCVSIAAGFAHS 442
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLP----SSLSFSQAALGWNHVLVLTGD 297
AL+ +G +YTWG G S SD P+ L ++ A G H + +
Sbjct: 443 VALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSE 502
Query: 298 GEVLMLGGSHHGMLSD 313
G ++ LG HG +++
Sbjct: 503 GSLITLGRVSHGRMAE 518
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 13/259 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G GQLG G D++ PQ + V ++ G H +A+T G +F+
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK-GEVKSVSAGFYHTVAVTH-----HGALFT 347
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGH + L P V F + AG +H+ ++ G +F+ G G
Sbjct: 348 WGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDS 407
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHG+ SP +S+ ++ IA G HS+ L Q+Y +G GK G+LG
Sbjct: 408 GRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQ---GQIYTWGCGKLGRLGH 464
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNSTSDVNCPQS 274
D + I I+ + ++A + +EG L T GR ++ +C Q
Sbjct: 465 GSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSCAQD 524
Query: 275 LPSSLSFS---QAALGWNH 290
+ +L + Q++ W+H
Sbjct: 525 MLDTLHTAISRQSSNDWHH 543
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 22/263 (8%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R + +S G H V+D+G ++T G G +GQLGHGD P V + V ++
Sbjct: 272 RVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPR-IKGEVKSVS 330
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD--IEIVGISA 242
G H++ + ++ +G GK G+LG + + R + P + + + + A
Sbjct: 331 AGFYHTVAVTHH---GALFTWGDGKEGKLGHNDNAQRLI--PTLVAAFIEWGMPVAAAQA 385
Query: 243 NGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLV 293
G + L+ G ++++G G + +D P +L S S AA G+ H +
Sbjct: 386 GGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAA-GFAHSVA 444
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
LT G++ G G L P +AL +S+ D +K I +AAG H+ +
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL--ISH-DTIKAIAVAAGEAHTCIFRS 501
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQ 376
+++T G HG++ G +C Q
Sbjct: 502 EGSLITLGRVSHGRMAEG-SCAQ 523
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VY +G G+ GQLG D + + P I E+ +SA + A++ G L+TWG
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRI---KGEVKSVSAGFYHTVAVTHHGALFTWGD 350
Query: 262 GFNST--SDVNCPQSLPS--------SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G + N + +P+ + + A G +H LVL G+V G G L
Sbjct: 351 GKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRL 410
Query: 312 ---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+D ++ S T +S L+ + + IAAG HS +T+ I TWG G+ G+L
Sbjct: 411 GHGNDNDQWSPT--------FLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRL 462
Query: 369 GLGNTCDQIHPKVVNL 384
G G+ D++ P+ + L
Sbjct: 463 GHGSDSDEVLPRKLAL 478
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+S+G+G G+LG G +D+ SP L+ +A G AH +ALT G+++
Sbjct: 398 QVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD-----QGQIY 452
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G G+LGHG D + P+ + ++AG H+ G L T G +
Sbjct: 453 TWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVS 512
Query: 155 FGQLGHG 161
G++ G
Sbjct: 513 HGRMAEG 519
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN--CPQSLPSSL-SFSQA 284
L + +S AA++ G +YTWG+G DV+ PQ +P
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKSV 329
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD-GVKVIQIAA 343
+ G+ H + +T G + G G L + P VA + ++ G+ V A
Sbjct: 330 SAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVA----AFIEWGMPVAAAQA 385
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
G H+ V+ + ++G G+ G+LG GN DQ P ++
Sbjct: 386 GGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLS 425
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+S L V ++ GA H A VT+ + TWG G +GQLG G+ D+I P+ V
Sbjct: 267 LSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPV 319
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 44/337 (13%)
Query: 93 VFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
+ +WG G GQLG G +V+AL P Y++ + +G +S + D
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEP----------YSVRSVVSGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G +FT G G LGH + ++ + P +V + N + Q A G H L + + Y
Sbjct: 57 GTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ---GRAY 113
Query: 204 GFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+G + GQ G KD + R + +P+ + + ++A G S L+ EGH+
Sbjct: 114 AWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRC--APKLTVRQVAAGGTHSVVLTREGHV 171
Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+TWG+ + + P + + S A+G H L L DG +L G + +G L
Sbjct: 172 WTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT- 373
+ ++ P+ V LD + ++ IAAG HS +T+ + WG GEHG+LG G+
Sbjct: 232 DTQPTSHPVPV-----HGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDND 286
Query: 374 -CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL E + ++V CG + A++R
Sbjct: 287 KSSKMVPQKVNLLAE----EDIIQVSCGGTHSVALTR 319
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 150/361 (41%), Gaps = 43/361 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ ++ SV + G + LA+ G +F+WG
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICD-----DGTMFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + T I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHPPETKTENIPSRVKALANVKITQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE---GHVWTWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
Q D I+ + +P GL ++ I+ + A + AL +G L WG G T
Sbjct: 176 --QPWPPGD-IKQIFVPVRVQGLENVSIIAVGAF--HNLALEEDGRLLAWGNNEYGQLGT 230
Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--DPERVS 318
D P S P L+ A G H LT GEV G HG L D ++ S
Sbjct: 231 GDTQ-PTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSS 289
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P +KV+ L +IQ++ G HS +T + I ++G G+HG+LG G
Sbjct: 290 KMVP-----QKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQ 344
Query: 379 P 379
P
Sbjct: 345 P 345
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 137/309 (44%), Gaps = 34/309 (11%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WG G LG E P + + ++ A GG H LA+ G+ +
Sbjct: 59 MFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ-----GRAY 113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF------FDGHRYTITHISAGWNHSGFVSDSGCLF 148
+WG GQ G + D + +PV + T+ ++AG HS ++ G ++
Sbjct: 114 AWGGNEYGQCGEEPLKDEMG-RPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVW 172
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
T G GD + PV+V +NV IA G H+L L +D ++ +G+
Sbjct: 173 TWGQ----PWPPGDIKQIFVPVRVQGL--ENVSIIAVGAFHNLALEED---GRLLAWGNN 223
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ GQLG + S +P GL D+ +V I+A G S AL+ +G +Y WGRG
Sbjct: 224 EYGQLGTGDTQPTSHPVP--VHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 264 ---NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
N S PQ +L + Q + G H + LT DG + G HG L +V+
Sbjct: 282 FGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341
Query: 319 STRPLSVAL 327
+ +PL + +
Sbjct: 342 TGQPLELPI 350
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-------LSSLSSVSMLACGGAHVLALTSPSS 87
+ ++WG GQ G L DE+ + + +V +A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V++WG+ G++ P V + ++ I+ G H+ + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQIFVPVRVQGLE----NVSIIAVGAFHNLALEEDGRL 217
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ +GQLG GD + S PV V + + IA G HS L +VYG+G
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ G+LG + S +PQ L + +I+ +S G S AL+ +G ++++GRG
Sbjct: 275 GEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 27/177 (15%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+WG GQLGTG P ++ L L+ V +A GG H ALT G+V+ W
Sbjct: 219 AWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVD-IAAGGWHSTALTDK-----GEVYGW 272
Query: 97 GRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
GRG G+LG G+ + P+ V I +S G HS ++ G +F+ G G
Sbjct: 273 GRGEHGRLGFGDNDKSSKMVPQKVNLL--AEEDIIQVSCGGTHSVALTRDGRIFSFGRGD 330
Query: 155 FGQLGHGDYRSHSSPVKVS--------SFVNKNVHQ--------IACGMRHSLVLLK 195
G+LG+G + P+++ SF + + + IACG RH+L +++
Sbjct: 331 HGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVE 387
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 170/401 (42%), Gaps = 48/401 (11%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ V +WG+G DGQLG G ++ P + +V+ + G + LA+ G
Sbjct: 6 RATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICD-----DG 60
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++F+WG G LGH E P PV G + I + G H V D G +
Sbjct: 61 RLFTWGWNQRGTLGHPPETKTESSPGPVDALAG--FKIVQAAIGGWHCLAVDDKGRAYAW 118
Query: 151 GDGTFGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G +GQ G R P+ + V Q+A G HS+VL ++ V
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQE---GHV 175
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
+ +G Q D I+ +S P GL + ++ + A + AL+ + L+ WG
Sbjct: 176 WTWG-----QPWPPGD-IKQISTPVRVQGLEKVRVIAVGAF--HNLALTEDVILWAWGNN 227
Query: 262 --GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS- 312
G T D P+S P S LS A G H LT DGEV G HG L
Sbjct: 228 EYGQLGTGDTQ-PRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGF 286
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++ S PL V L L G ++Q++ G HS + + + ++G G+HG+LG G
Sbjct: 287 GDDKSSHMVPLKVEL-----LAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGR 341
Query: 373 TCDQIHPK--VVNLGDEFQNRDTQLE---VFCGSGFTYAIS 408
HP +NL +RD + + V CG T AI+
Sbjct: 342 KVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIA 382
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 148/328 (45%), Gaps = 26/328 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V +WG G GQLG G + +P V Y +T + AG +S + D G LFT G
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWPHFVEALG--PYAVTAVVAGSRNSLAICDDGRLFTWGW 67
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G LGH + ++ SSP V + + Q A G H L + + Y +G + G
Sbjct: 68 NQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDK---GRAYAWGGNEYG 124
Query: 212 QLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
Q G +R R + +PQ +++ ++A G S L+ EGH++TWG+ +
Sbjct: 125 QCGEEPERKEDGTRALRRDIPIPQRCA--LKLKVRQVAAGGTHSVVLTQEGHVWTWGQPW 182
Query: 264 --NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++ P + A+G H L LT D + G + +G L + ++
Sbjct: 183 PPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRSQ 242
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ +V L + ++ IAAG HS +T + + WG GEHG+LG G D +
Sbjct: 243 PI-----RVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGFG---DDKSSHM 294
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V L E + ++V CG + A++R
Sbjct: 295 VPLKVELLAGEDIVQVSCGGTHSVALAR 322
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 114 bits (285), Expect = 1e-22, Method: Composition-based stats.
Identities = 105/412 (25%), Positives = 171/412 (41%), Gaps = 73/412 (17%)
Query: 18 NNAKPKIEEEEEEQQVVK-------VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS 70
+N +I+ E E Q ++ ++ WG G DG+LG PQ++ VS
Sbjct: 837 SNEPNRIQNELESQITLQKPQYNGIIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQACQVS 896
Query: 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITH 130
+ G H A S G++ +WGRG+ GQLGH + L P PV FF + +I
Sbjct: 897 L----GYHHSACISNQ----GQILTWGRGNRGQLGHSSFENCLLPTPVNFFS--KMSIVS 946
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+ GW H+ +S+ G +F+ G G GQLG GDY+S +SP ++S V QI G HS
Sbjct: 947 VGCGWQHTLALSNDGRVFSWGFGEDGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHS 1006
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDR 246
V+ + + ++G R ++++ I + + G D V S +
Sbjct: 1007 SVITSEGI-FMMFGCNIDHRLMNKTNQNQFLPCITELEFLRQEYG-SDYNAVKASLGVNH 1064
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFS------------------------ 282
SA ++ G+LYT G G + P+SL
Sbjct: 1065 SAVITKNGNLYTSGLGNEGQLGSFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFD 1124
Query: 283 ------------------QAALGWNHVLVLTGDGEVLMLG-GSHH--GMLSDPERVSSTR 321
Q + G + LV+ +V G GS++ G L +
Sbjct: 1125 RICYFNKVNFFNKKNKAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYE 1184
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + + +L K+ ++ G H+ +T + + TWG+ + QLGLG++
Sbjct: 1185 P-----KLIESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDS 1231
Score = 91.3 bits (225), Expect = 9e-16, Method: Composition-based stats.
Identities = 90/369 (24%), Positives = 161/369 (43%), Gaps = 68/369 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++ +WG G GQLG + L P +N S S+ + CG H LAL++ G+VF
Sbjct: 910 QILTWGRGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSN-----DGRVF 964
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG G GQLG G+ P+ + +G Y +T I+AG +HS ++ G G
Sbjct: 965 SWGFGEDGQLGLGDYQSQNSPQFINSLEG--YFVTQINAGHSHSSVITSEGIFMMFGCNI 1022
Query: 155 FGQLGHGDYRSHSSP-VKVSSFVNK------NVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+L + ++ P + F+ + N + + G+ HS V+ K+ GN +Y G
Sbjct: 1023 DHRLMNKTNQNQFLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKN--GN-LYTSGL 1079
Query: 208 GKRGQLG--VSKDRIRSVSLPQVTIGLHDI------------------------------ 235
G GQLG +S+D S+ + + + + +
Sbjct: 1080 GNEGQLGSFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNKVNFFNKKN 1139
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLPSSLSF--SQA 284
+ + +S + ++ + +Y++G+G + +V P+ + S +F +
Sbjct: 1140 KAIQVSCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLKNFKITSV 1199
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
+ G H + +T DG+V G + + L D E+ +P KV+ L G+ V Q +
Sbjct: 1200 STGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEK-DYQQP-----TKVTKLSGLNVKQSS 1253
Query: 343 AGAEHSAVV 351
G H++V+
Sbjct: 1254 CGYFHTSVL 1262
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 254 GHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
G +Y WG G PQ +P+ + Q +LG++H ++ G++L G +
Sbjct: 860 GIIYIWGNGKDGRLGIEGEKPFKFPQIIPN-IQACQVSLGYHHSACISNQGQILTWGRGN 918
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
G L + P V + ++ + G +H+ ++ + + +WG+GE GQ
Sbjct: 919 RGQLGHSSFENCLLPTPVNF-----FSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQ 973
Query: 368 LGLGNTCDQIHPKVVN 383
LGLG+ Q P+ +N
Sbjct: 974 LGLGDYQSQNSPQFIN 989
Score = 58.5 bits (140), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV---DALYPKPVTFFDGHRYTI 128
++CG + L + S +V+S+G+GS +LGH ++ + PK + + I
Sbjct: 1144 VSCGDSFTLVINEQS-----QVYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLKN--FKI 1196
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGM 187
T +S G H+ +++ G ++T G + QLG GD + + P KV+ NV Q +CG
Sbjct: 1197 TSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQSSCGY 1256
Query: 188 RHSLVLL 194
H+ VL+
Sbjct: 1257 FHTSVLV 1263
>gi|406991558|gb|EKE11048.1| hypothetical protein ACD_15C00149G0001, partial [uncultured
bacterium]
Length = 1643
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 183/411 (44%), Gaps = 61/411 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIG 90
K WSWG + GQLG L + P Q+L+ + LS VS + G + +A + S
Sbjct: 491 KAWSWGYDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSD--- 547
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFF---DGHRYTITHISAGWNHSGFVSDSGCL 147
G V+SWG+ GQLG+ VD + P++ + +G+ + +S+G H+ + G +
Sbjct: 548 GSVWSWGKNDKGQLGN-NTVDPVR-TPISTWGPANGNIPDVQSVSSGRYHTIALKTDGTV 605
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSS---FVN-KNVHQIACGMRHSLVLLKDCLGNQVY 203
+ G GQLG ++ +P++V F N +N+ ++A G HSL D V+
Sbjct: 606 WDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHSLARRSDG---TVW 662
Query: 204 GFGSGKRGQLGVS---KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+G G G+LG R V + +V ISA D S AL ++G ++ WG
Sbjct: 663 AWGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTVWAWG 722
Query: 261 R------GFNSTSDVNCPQSLPSS------LSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+ G NST+ N P + + S + G N VLV DG V G + +
Sbjct: 723 KNDRGQLGDNSTNYKNLPVQVLGVGGAGFLNNVSSISAGSNFVLVAKNDGTVFSWGHNAN 782
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L D P+ V L+ V I+AG HS + + ++ +WGW +GQL
Sbjct: 783 GQLGDNTVSGKLTPIQV-------LNINNVSSISAGYAHSLALKTDGSVWSWGWNGNGQL 835
Query: 369 GLGNTCDQ-IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR------HCL 412
G G D + P Q++ G+GF IS+ HCL
Sbjct: 836 GEGTNIDNSLLP-------------LQVKNSTGTGFLSDISKIATGSNHCL 873
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 164/366 (44%), Gaps = 44/366 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
VWSWG T GQLG + ++ P Q+L + LSSV+ ++ G ++ LA+ S G
Sbjct: 324 VWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGASYALAVKSD-----G 378
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFT 149
V +WG+ SGQLG+ D+ P V D G+ +I +SA HS + G +++
Sbjct: 379 TVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLSSIISVSADGTHSLSLKSDGTVWS 438
Query: 150 CGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G GQLG + +PV+V + F+ ++ IA G + SL + D + +
Sbjct: 439 WGKNDKGQLGINSFIDKKTPVQVLDSTGTGFL-TDIVSIATGNKFSLAVKNDG---KAWS 494
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGDRSAA---LSAEGHLYTWG 260
+G GQLG + RS+ + G ++ V GD A ++G +++WG
Sbjct: 495 WGYDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSDGSVWSWG 554
Query: 261 R------GFNSTSDVNCPQS--------LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
+ G N+ V P S +P S S H + L DG V GG+
Sbjct: 555 KNDKGQLGNNTVDPVRTPISTWGPANGNIPDVQSVSSGRY---HTIALKTDGTVWDWGGN 611
Query: 307 HHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+G L + P+ V NL+ ++++AAG HS + + WG G
Sbjct: 612 GNGQLGTTAGQNRLTPIQVRGPGGFGNLE--NIVEVAAGDYHSLARRSDGTVWAWGRGSL 669
Query: 366 GQLGLG 371
G+LG G
Sbjct: 670 GELGDG 675
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 161/365 (44%), Gaps = 50/365 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN----LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
VW WG +GQLGT + L+P + +L ++ +A G H LA S G
Sbjct: 605 VWDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHSLARRSD-----G 659
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCL 147
V++WGRGS G+LG G + Y PV D G + ISAG ++S + G +
Sbjct: 660 TVWAWGRGSLGELGDGTWISTRY-NPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTV 718
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+ G GQLG + PV+V + F+N NV I+ G LV D V
Sbjct: 719 WAWGKNDRGQLGDNSTNYKNLPVQVLGVGGAGFLN-NVSSISAGSNFVLVAKNDG---TV 774
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ +G GQLG D S L + + L+ + ISA S AL +G +++WG
Sbjct: 775 FSWGHNANGQLG---DNTVSGKLTPIQV-LNINNVSSISAGYAHSLALKTDGSVWSWG-- 828
Query: 263 FNSTSDVNCPQSLPSSL---------------SFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+N + ++ +SL S+ A G NH LV+ D G +
Sbjct: 829 WNGNGQLGEGTNIDNSLLPLQVKNSTGTGFLSDISKIATGSNHCLVMKSDNTAFAWGLNG 888
Query: 308 HGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG--E 364
+G L + V+ P+ V S GV ++ AG +S ++ + +++ W WG
Sbjct: 889 NGQLGNNSIVNKNLPVQVLNSNGSSGFTGVSFVE--AGFANSTIIKSSDSLV-WNWGINS 945
Query: 365 HGQLG 369
+G+LG
Sbjct: 946 YGELG 950
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 161/380 (42%), Gaps = 44/380 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
VWSWG T GQLG L D +P Q++ L+ + M++ G H LAL S G
Sbjct: 212 VWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLNDIEMVSAGTNHSLALKSD-----G 266
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCL 147
V+SWG +GQLG+ + +L PV G + +SAG +S + G +
Sbjct: 267 TVWSWGNNDNGQLGNNLV--SLKNIPVQVVGPGGIGVLSNVISVSAGEGYSLALKSDGTV 324
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
++ G T GQLG PV+V F+ +V I+ G ++L + D V
Sbjct: 325 WSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFL-SSVASISAGASYALAVKSDG---TV 380
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI----EIVGISANGDRSAALSAEGHLYT 258
+G GQLG + +P +G+ + I+ +SA+G S +L ++G +++
Sbjct: 381 VAWGKNDSGQLG--NNSYADSYVPVQVLGVDGMGNLSSIISVSADGTHSLSLKSDGTVWS 438
Query: 259 WGR------GFNSTSDVNCP-QSLPSS-----LSFSQAALGWNHVLVLTGDGEVLMLGGS 306
WG+ G NS D P Q L S+ A G L + DG+ G
Sbjct: 439 WGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLTDIVSIATGNKFSLAVKNDGKAWSWGYD 498
Query: 307 HHGMLSDPERVSSTRPLSVALEKVS-NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L D + P + + NL V I G + + ++ +WG +
Sbjct: 499 STGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSDGSVWSWGKNDK 558
Query: 366 GQLGLGNTCDQIHPKVVNLG 385
GQLG NT D + + G
Sbjct: 559 GQLG-NNTVDPVRTPISTWG 577
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 172/402 (42%), Gaps = 58/402 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLN---LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
VWSWG +GQLG + + P Q++ + LS+V ++ G + LAL S G
Sbjct: 268 VWSWGNNDNGQLGNNLVSLKNIPVQVVGPGGIGVLSNVISVSAGEGYSLALKSD-----G 322
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFT 149
V+SWG+ + GQLG +V+ YP V G + ++ ISAG +++ V G +
Sbjct: 323 TVWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGASYALAVKSDGTVVA 382
Query: 150 CGDGTFGQLGHGDYRSHSSPVKV---------SSFVNKNVHQIACGMRHSLVLLKDCLGN 200
G GQLG+ Y PV+V SS + ++ HSL L D
Sbjct: 383 WGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLSSII-----SVSADGTHSLSLKSDG--- 434
Query: 201 QVYGFGSGKRGQLGVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
V+ +G +GQLG++ D+ V + T +IV I+ S A+ +G ++
Sbjct: 435 TVWSWGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLTDIVSIATGNKFSLAVKNDGKAWS 494
Query: 259 WGRGFNSTSDVN----CPQSLP------------SSLSFSQAALGWNHVLVLTGDGEVLM 302
WG ++ST + +SLP S +SF G+ DG V
Sbjct: 495 WG--YDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSDGSVWS 552
Query: 303 LGGSHHGMLS----DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
G + G L DP R P+S N+ V+ +++G H+ + + +
Sbjct: 553 WGKNDKGQLGNNTVDPVRT----PISTWGPANGNIPDVQ--SVSSGRYHTIALKTDGTVW 606
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
WG +GQLG +++ P V F N + +EV G
Sbjct: 607 DWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAG 648
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 166/382 (43%), Gaps = 44/382 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
VWSWG GQLG D+ +P Q+L+ + L+ + +A G LA+ + G
Sbjct: 436 VWSWGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLTDIVSIATGNKFSLAVKND-----G 490
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPV--TFFDGHRYTITHISAGWNHS-GFVSDS-GCL 147
K +SWG S+GQLG + + P + T G+ ++ I G ++ F +DS G +
Sbjct: 491 KAWSWGYDSTGQLGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSDGSV 550
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN---VHQIACGMRHSLVLLKDCLGNQVYG 204
++ G GQLG+ +P+ N N V ++ G H++ L D V+
Sbjct: 551 WSWGKNDKGQLGNNTVDPVRTPISTWGPANGNIPDVQSVSSGRYHTIALKTDG---TVWD 607
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTI----GLHDIE-IVGISANGDRSAALSAEGHLYTW 259
+G GQLG + + R L + + G ++E IV ++A S A ++G ++ W
Sbjct: 608 WGGNGNGQLGTTAGQNR---LTPIQVRGPGGFGNLENIVEVAAGDYHSLARRSDGTVWAW 664
Query: 260 GRG-FNSTSDVNCPQSLPSSLSFSQAA------------LGWNHVLVLTGDGEVLMLGGS 306
GRG D + + + AA G ++ + L DG V G +
Sbjct: 665 GRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTVWAWGKN 724
Query: 307 HHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L D P+ V + L+ V I+AG+ V + + +WG +
Sbjct: 725 DRGQLGDNSTNYKNLPVQVLGVGGAGFLNNVS--SISAGSNFVLVAKNDGTVFSWGHNAN 782
Query: 366 GQLGLGNTCDQIHP-KVVNLGD 386
GQLG ++ P +V+N+ +
Sbjct: 783 GQLGDNTVSGKLTPIQVLNINN 804
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-----SSFVNKNVHQ 182
+ ISAG + + +++ G+ T GQLG +PV+V S ++N ++
Sbjct: 193 VAAISAGNSFVLAIKSDNSVWSWGENTSGQLGDKTLIDRYTPVQVVGAGGSGYLN-DIEM 251
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI--EIVGI 240
++ G HSL L D V+ +G+ GQLG + ++++ + V G + ++ +
Sbjct: 252 VSAGTNHSLALKSDG---TVWSWGNNDNGQLGNNLVSLKNIPVQVVGPGGIGVLSNVISV 308
Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---------QSLPSSLSFSQAA 285
SA S AL ++G +++WG+ G N+ + + P + L S S S A
Sbjct: 309 SAGEGYSLALKSDGTVWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSVASISAGA 368
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAG 344
++ L + DG V+ G + G L + S P+ V ++ + NL +I ++A
Sbjct: 369 ---SYALAVKSDGTVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGNLS--SIISVSAD 423
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
HS + + + +WG + GQLG+ + D+ P
Sbjct: 424 GTHSLSLKSDGTVWSWGKNDKGQLGINSFIDKKTP 458
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 13/145 (8%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSS----LSSVSMLACGGAHVLALTSPSSVIG 90
VWSWG +GQLG G + + L P + S+ LS +S +A G H L + S ++
Sbjct: 824 VWSWGWNGNGQLGEGTNIDNSLLPLQVKNSTGTGFLSDISKIATGSNHCLVMKSDNTA-- 881
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YT-ITHISAGWNHSGFVSDSGCL- 147
F+WG +GQLG+ +V+ P V +G +T ++ + AG+ +S + S L
Sbjct: 882 ---FAWGLNGNGQLGNNSIVNKNLPVQVLNSNGSSGFTGVSFVEAGFANSTIIKSSDSLV 938
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKV 172
+ G ++G+LG+ PV V
Sbjct: 939 WNWGINSYGELGNNRVDGTLLPVSV 963
>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 168/391 (42%), Gaps = 36/391 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG GQLG G D +P ++L ++V+ +A G H LALTS G V
Sbjct: 57 TVLAWGDNLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTS-----TGTVL 111
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR GQL G+ + PVT T+T I+AG +HS ++ +G G
Sbjct: 112 AWGRNRFGQL--GDETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITSTGSALAWGRNF 169
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + PV V+ V IA G HSL + +G GQLG
Sbjct: 170 SGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTS---AGTALAWGRNFAGQLG 226
Query: 215 VSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGR--------GFNS 265
D + S VT+ + + I+A S A+++ G WGR G +
Sbjct: 227 ---DGTTNDSTTPVTVSVAPGTTVTDIAAGRVHSLAITSAGTALGWGRNGSGQLGDGTTN 283
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
S S P+ F+ A G +H L +T G L G + +G L D SS ++V
Sbjct: 284 DSTTPTTVSPPTGTVFTTVAAGEDHSLAVTSAGTALAAGDNLYGQLGDGTNTSSNTFVTV 343
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+L + + IA G H+ VT A + WG GQLG G T ++ P+ V+L
Sbjct: 344 SLPPST-----TITAIAVGRFHNLGVTATGAALAWGINIDGQLGDGTTTNRNTPQAVDL- 397
Query: 386 DEFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
+ GF ++++ P+ T
Sbjct: 398 --------PVSTTVAGGFGHSLALAAPPTST 420
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 104/240 (43%), Gaps = 26/240 (10%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
S + GD FGQLG G +P+ VS V IA G HSL L V
Sbjct: 55 SDTVLAWGDNLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTST---GTVL 111
Query: 204 GFGSGKRGQLGVSKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+G + GQLG + RS VSLP T + I+A S A+++ G W
Sbjct: 112 AWGRNRFGQLGDETNTSRSTPVTVSLPPGT------TVTAIAAGRSHSLAITSTGSALAW 165
Query: 260 GRGFN------STSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
GR F+ +T+D N P + LP + + A G H L +T G L G + G L
Sbjct: 166 GRNFSGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTSAGTALAWGRNFAGQL 225
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
D ST P++V++ G V IAAG HS +T + WG GQLG G
Sbjct: 226 GDGTTNDSTTPVTVSVAP-----GTTVTDIAAGRVHSLAITSAGTALGWGRNGSGQLGDG 280
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 156/349 (44%), Gaps = 33/349 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W+WG GQLG + +P + L+ V LA G AH L L + G SW
Sbjct: 659 WAWGGNDQGQLGDATTLERSTPAAV--PGLAHVVALAAGNAHSLVLHAD-----GTSSSW 711
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G + GQLG G L+P PV + ++AG +HS V G ++ G+ G
Sbjct: 712 GNNAYGQLGDG--TSTLHPVPVQVPG--PSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSG 767
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG G PV+V + ++ G HSL + D V+ +G +GQLG
Sbjct: 768 ELGDGTGLQRPRPVQVQGL--GSAVAVSAGTNHSLAVQSD---GTVWAWGGNSQGQLGDG 822
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVN- 270
R V P GL+ + + +SA S AL ++G ++ WG F ++TS
Sbjct: 823 TGITRYV--PVRVSGLNGV--MAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRL 878
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P +P A G +H L + DG V G + +G L D ++ + P+ +V
Sbjct: 879 VPIQVPGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPV-----QV 933
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L G+ + +AAG HS V N + WG+ HGQLG G T ++ P
Sbjct: 934 PGLAGM--VSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLP 980
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 156/352 (44%), Gaps = 41/352 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG GQ+G G + +L+P + + + + +A GGAH LA+ + G ++WG
Sbjct: 310 AWGNNDHGQVGNGTISQQLTP--VQVPGVGRMKSIAAGGAHSLAMRAD-----GITWAWG 362
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLG G+ L P V G R + + G HS + G ++ G T GQ
Sbjct: 363 DDSQGQLGDGQSSQQLRPARVL---GQRIRMP-LGTGNRHSLALHADGTVWAWGVNTAGQ 418
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
LG G + PV+V VH ++ HSL D V+ +G GQLG
Sbjct: 419 LGDGTDLPRTLPVQVPGL--AGVHTLSATTSHSLAARAD---GTVWAWGDNAFGQLGDGT 473
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----- 270
+ R+ V +P GL ++ V S+ S A+S +G ++ WG FN + +
Sbjct: 474 TTQRLLPVQVP----GLAGVDTV--SSMHQHSLAVSRDGTVWAWG--FNGSGRLGDGTTL 525
Query: 271 ---CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P +P S A G H L L DG V G + +G L D + P+
Sbjct: 526 SRLTPVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPV---- 581
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L GV + +AAG +S V ++ WG+ GQLG G T ++ P
Sbjct: 582 -QVPGLSGV--VALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTP 630
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 148/340 (43%), Gaps = 41/340 (12%)
Query: 48 GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107
G R+ L+P L +A G AH L L S G V++WG + GQLG G
Sbjct: 24 GPSRIEAALTPPPLGHE------QVAAGAAHSLMLRSD-----GTVWAWGDNTYGQLGDG 72
Query: 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
+ P V D ++ ++ G+ HS + G ++ GD FGQLG G
Sbjct: 73 TGITQRLPVRVQSLD----SVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQ 128
Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227
P++V S V IA G HSL LL D V+ +G GQLG D + LP
Sbjct: 129 VPIQVWSL--NGVVAIAAGDHHSLALLSD---GSVWAWGYNAHGQLG--DDTTVASPLPV 181
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSF 281
GL + V +SA S A+ ++G + WG + S+++ P + S
Sbjct: 182 QVQGLSGV--VALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGV 239
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST--RPLSVALEKVSNLDGVKVI 339
G H L L DG V G + G L +SST RP+ V + ++N V
Sbjct: 240 KSVVAGTFHSLALCSDGTVRAWGENGSGQLG----ISSTTRRPVPVVVPGLTN-----VQ 290
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+AAG+ HS + + + WG +HGQ+G G Q+ P
Sbjct: 291 ALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTP 330
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 160/353 (45%), Gaps = 44/353 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG GQLG G L P + + S++ +A GG+H LA+ S G V++WG
Sbjct: 710 SWGNNAYGQLGDGT--STLHPVPVQVPGPSAMKGVAAGGSHSLAVRSD-----GTVWAWG 762
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SG+LG G + P+PV + +SAG NHS V G ++ G + GQ
Sbjct: 763 NNGSGELGDGTGLQ--RPRPVQVQG--LGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQ 818
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
LG G + PV+VS V ++ G HSL L D V+ +G GQLG
Sbjct: 819 LGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSD---GTVWAWGYNFYGQLGDAT 873
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDV 269
S R+ + +P +T +V I+A S A+ ++G ++ WG F +
Sbjct: 874 STQRLVPIQVPGLT------GVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQR 927
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P +P A G H L + +G V G ++HG L D ++ R L V +
Sbjct: 928 SPPVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGD--GTTTQRLLPVPISS 985
Query: 330 VSNLDGVKVIQIAAGAE-HSAVVTENRAIMTWGWGEHG--QLGLGNTCDQIHP 379
S + IAA A HS VV + + WGWG + QLG G+T D+ P
Sbjct: 986 SSGV-------IAAAANWHSLVVRTDGTV--WGWGSNNASQLGDGSTSDRKMP 1029
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 169/387 (43%), Gaps = 51/387 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG T GQLG G + P + + SL SV LA G H LAL S G V++
Sbjct: 58 VWAWGDNTYGQLGDGTGITQRLP--VRVQSLDSVVALAVGYQHSLALRSD-----GTVWA 110
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G + P V +G + I+AG +HS + G ++ G
Sbjct: 111 WGDNFFGQLGDGSDAQSQVPIQVWSLNG----VVAIAAGDHHSLALLSDGSVWAWGYNAH 166
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG- 214
GQLG + PV+V V ++ G HSL +L D +V +G GQLG
Sbjct: 167 GQLGDDTTVASPLPVQVQGL--SGVVALSAGSTHSLAVLSD---GKVKAWGDNYYGQLGD 221
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
S +R V + +T + + A S AL ++G + WG G +ST+
Sbjct: 222 GSSTERWTPVLVSSLT------GVKSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTT 275
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P +P + A G H L L DG V G + HG + + P+ V
Sbjct: 276 RRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVP- 334
Query: 328 EKVSNLDGV-KVIQIAAGAEHSAVVTENRAIMTWGWGE--HGQLGLGNTCDQIHPKVVNL 384
GV ++ IAAG HS + + +TW WG+ GQLG G + Q+ P V L
Sbjct: 335 -------GVGRMKSIAAGGAHSLAMRADG--ITWAWGDDSQGQLGDGQSSQQLRPARV-L 384
Query: 385 GDEFQNRDTQLEVFCGSGFTYAISRHC 411
G ++ + G+G ++++ H
Sbjct: 385 GQ-------RIRMPLGTGNRHSLALHA 404
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 167/381 (43%), Gaps = 45/381 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG GQLG G L P Q+ L+ + +VS + H LA++ G V+
Sbjct: 458 VWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMH---QHSLAVSRD-----GTVW 509
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SG+LG G + L P V ++ ++AG HS + G ++ GD +
Sbjct: 510 AWGFNGSGRLGDGTTLSRLTPVQVPGLS----SMVAVAAGSTHSLALRADGTVWAWGDNS 565
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G LG G SPV+V V +A G +SL + D G+ V+ +G GQLG
Sbjct: 566 NGALGDGTTLRRLSPVQVPGL--SGVVALAAGNGYSLAV--DAQGS-VWAWGYNGMGQLG 620
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
+ R+ P ++ +V ++A S AL A+G + WG G +T
Sbjct: 621 DGTTTPRVTPTQAPALS------GVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATT 674
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ + P ++P A G H LVL DG G + +G L D S+ P+ V
Sbjct: 675 LERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGD--GTSTLHPVPVQ 732
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ S + GV AAG HS V + + W WG +G LG+ P+ V
Sbjct: 733 VPGPSAMKGV-----AAGGSHSLAVRSDGTV--WAWGNNGSGELGDGTGLQRPRPV---- 781
Query: 387 EFQNRDTQLEVFCGSGFTYAI 407
+ Q + + V G+ + A+
Sbjct: 782 QVQGLGSAVAVSAGTNHSLAV 802
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 155/355 (43%), Gaps = 36/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG G+LG G P+ + + L S ++ G H LA+ S G V++
Sbjct: 758 VWAWGNNGSGELGDGTGLQR--PRPVQVQGLGSAVAVSAGTNHSLAVQSD-----GTVWA 810
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQLG G + P V+ +G + +SAG HS + G ++ G +
Sbjct: 811 WGGNSQGQLGDGTGITRYVPVRVSGLNG----VMAVSAGSAHSLALRSDGTVWAWGYNFY 866
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG P++V V IA G HSL + D V+ +G GQLG
Sbjct: 867 GQLGDATSTQRLVPIQVPGLTG--VVSIAAGTHHSLAVRSD---GTVWAWGYNFYGQLGD 921
Query: 216 SKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
RS P V + GL +V ++A S A+ + G ++ WG G +T+
Sbjct: 922 GTKIQRS---PPVQVPGL--AGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQ 976
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + SS AA W H LV+ DG V G ++ L D P ++
Sbjct: 977 RLLPVPISSSSGVIAAAANW-HSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPSSVP 1035
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+GV+ I++GA HS + + + WG+G GQLG G ++ P V+
Sbjct: 1036 -----NGVR--SISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVS 1083
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 151/353 (42%), Gaps = 35/353 (9%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W+WG + GQLG G+ +L P + + L G H LAL + G V++W
Sbjct: 359 WAWGDDSQGQLGDGQSSQQLRPARVLGQRIRM--PLGTGNRHSLALHAD-----GTVWAW 411
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G ++GQLG G + P V G + +SA +HS G ++ GD FG
Sbjct: 412 GVNTAGQLGDGTDLPRTLPVQVPGLAG----VHTLSATTSHSLAARADGTVWAWGDNAFG 467
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF-GSGKRGQLGV 215
QLG G PV+V V ++ +HSL + +D +GF GSG+ G G
Sbjct: 468 QLGDGTTTQRLLPVQVPGL--AGVDTVSSMHQHSLAVSRDGT-VWAWGFNGSGRLGD-GT 523
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
+ R+ V +P ++ +V ++A S AL A+G ++ WG N +T
Sbjct: 524 TLSRLTPVQVPGLS------SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRR 577
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P +P A G + L + G V G + G L D +T P V +
Sbjct: 578 LSPVQVPGLSGVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGD----GTTTP-RVTPTQ 632
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L GV + +AAG HS + + WG + GQLG T ++ P V
Sbjct: 633 APALSGV--VALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAV 683
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 155/356 (43%), Gaps = 43/356 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV +WG GQLG G + +P L +SSL+ V + G H LAL S G V
Sbjct: 207 KVKAWGDNYYGQLGDGSSTERWTPVL--VSSLTGVKSVVAGTFHSLALCSD-----GTVR 259
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SGQLG + + +PV + ++AG HS + G + G+
Sbjct: 260 AWGENGSGQLG----ISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNND 315
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
GQ+G+G +PV+V + IA G HSL + D + + +G +GQL
Sbjct: 316 HGQVGNGTISQQLTPVQVPGV--GRMKSIAAGGAHSLAMRADGI---TWAWGDDSQGQLG 370
Query: 214 -GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGRGFNSTSDVNC 271
G S ++R P +G +G G+R S AL A+G ++ W G N+ +
Sbjct: 371 DGQSSQQLR----PARVLGQRIRMPLG---TGNRHSLALHADGTVWAW--GVNTAGQLGD 421
Query: 272 PQSLPSSLSFSQAALGWNHVLVLT--------GDGEVLMLGGSHHGMLSDPERVSSTRPL 323
LP +L L H L T DG V G + G L D ++ R L
Sbjct: 422 GTDLPRTLPVQVPGLAGVHTLSATTSHSLAARADGTVWAWGDNAFGQLGD--GTTTQRLL 479
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V + ++ +D V + +HS V+ + + WG+ G+LG G T ++ P
Sbjct: 480 PVQVPGLAGVDTVSSMH-----QHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTP 530
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
AL P P+ GH ++AG HS + G ++ GD T+GQLG G + PV+
Sbjct: 31 ALTPPPL----GHE----QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVR 82
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
V S +V +A G +HSL L D V+ +G GQLG D + QV I
Sbjct: 83 VQSL--DSVVALAVGYQHSLALRSD---GTVWAWGDNFFGQLGDGSD-----AQSQVPIQ 132
Query: 232 LHDIE-IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL---- 286
+ + +V I+A S AL ++G ++ WG +N+ + ++ S L L
Sbjct: 133 VWSLNGVVAIAAGDHHSLALLSDGSVWAWG--YNAHGQLGDDTTVASPLPVQVQGLSGVV 190
Query: 287 ----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
G H L + DG+V G +++G L D P+ VS+L GVK +
Sbjct: 191 ALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPV-----LVSSLTGVK--SVV 243
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
AG HS + + + WG GQLG+ +T + P VV
Sbjct: 244 AGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPVVV 283
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG-----VSKDRIRSVSLPQVTIGLHDIE 236
Q+A G HSL+L D V+ +G GQLG + +R SL V
Sbjct: 41 QVAAGAAHSLMLRSD---GTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDSV-------- 89
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNH 290
V ++ S AL ++G ++ WG F S + P + S A G +H
Sbjct: 90 -VALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHH 148
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L L DG V G + HG L D V+S PL V ++ +S V+ ++AG+ HS
Sbjct: 149 SLALLSDGSVWAWGYNAHGQLGDDTTVAS--PLPVQVQGLSG-----VVALSAGSTHSLA 201
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V + + WG +GQLG G++ ++ P +V+
Sbjct: 202 VLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVS 234
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L P + +SS S V + A H L + + G V+
Sbjct: 958 VWAWGYNNHGQLGDGTTTQRLLP--VPISSSSGV-IAAAANWHSLVVRTD-----GTVWG 1009
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++ QLG G D P P + +G R IS+G NHS + G ++ G G
Sbjct: 1010 WGSNNASQLGDGSTSDRKMPTPSSVPNGVR----SISSGANHSLALRSDGTVWAWGFGNS 1065
Query: 156 GQLGHGDYRSHSSPVKVSSF 175
GQLG G P VS F
Sbjct: 1066 GQLGDGVMSMRLVPAGVSGF 1085
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 138/290 (47%), Gaps = 28/290 (9%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
++S G H+ V+ + L+ G +GQLG G P V + + V ACG H
Sbjct: 39 YLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+L+L +GN VY G GQLG+ R+ + +++ + I +SA + SAA
Sbjct: 99 TLILT--VVGN-VYAAGGNNEGQLGLGDTEERN-TFHRISFFTSEHNIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
LS +G L+ WG G N V P + S + G+ H +T DGE+
Sbjct: 155 LSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYTF 214
Query: 304 GGSHHGMLSDPER--VSSTRPLSVALEKVSNLDGV--KVIQIAAGAEHSAVVTENRAIMT 359
G G L P+ ++ P VA G+ KVIQ+A G H+ V+TE +A+ T
Sbjct: 215 GEPESGKLGLPKELLINHRTPQLVA--------GIPEKVIQVACGGGHTVVLTE-KAVYT 265
Query: 360 WGWGEHGQLGLGNTC-DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+G G+ GQLGLG C + + PKV+ ++ +N+ + CG T IS
Sbjct: 266 FGLGQFGQLGLGTFCFETLEPKVI---EQIKNQKITY-ISCGENHTALIS 311
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 164/368 (44%), Gaps = 67/368 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G D P + V ACG H L LT + G V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHTLILT-----VVGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +S+ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERNTFHRISFFTS-EHNIKQLSAGSNTSAALSEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G D S P +V+ + K + I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLNDVISVCVPHQVN--IGKPISWISCGYYHSAFVTMD---GELYTFGEPESGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ K+ + + PQ+ G+ + +++ ++ G + L+ E +YT+G G
Sbjct: 224 LPKELLINHRTPQLVAGIPE-KVIQVACGGGHTVVLT-EKAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L +P+ +E++ N
Sbjct: 270 -----QFGQLGLGTFCFETL------------------EPK----------VIEQIKNQ- 295
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVNLGDEFQNRD 392
K+ I+ G H+A++++ + T+G G HG+LGLG N +Q P L EF
Sbjct: 296 --KITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPI---LCSEFLRFT 350
Query: 393 TQLEVFCG 400
QL V CG
Sbjct: 351 VQL-VACG 357
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G G+LG + L + +PQL+ V +ACGG H + LT +
Sbjct: 210 ELYTFGEPESGKLGLPKELLINHRTPQLV-AGIPEKVIQVACGGGHTVVLTEKA------ 262
Query: 93 VFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + L PK + + IT+IS G NH+ +SD G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQK--ITYISCGENHTALISDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ + P+ S F+ V +ACG +LV
Sbjct: 321 DGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVF 364
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ +
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTLP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 136/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 3938 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 3990
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V V IACG +L
Sbjct: 3991 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLC 4050
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4051 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4105
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4106 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4127
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4128 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4176
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4177 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4208
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4004
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4005 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4064
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4065 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4121
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4122 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4165
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G L P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
G+LG + ++PQ L+ + I S AL+ G ++TW F
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWYVSF 3234
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L I+++G G+++ A++A+G LY
Sbjct: 3845 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIG----GEQTLFAVTADGKLYAT 3900
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 3901 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3960
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 3961 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4015
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4016 HSDSEDQLKPKLV----EVLQGHRVVDIACGSG 4044
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--IQLIGGEQTLFAVTADGKLYAT 3900
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 3901 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 3957
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 3958 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4015
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L L + G L LT D V G +G L
Sbjct: 4016 HSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4075
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4076 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4130
Query: 379 PKVVN 383
P+ V
Sbjct: 4131 PRQVQ 4135
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S Q A G + +T +GE+ G ++G L
Sbjct: 534 LPLEEPKVI-SAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 123/292 (42%), Gaps = 33/292 (11%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++ I KVF WG QLG + P + ++ G V+ G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 3012
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVK-----VSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
++ CG+ T G+LG G S + P+ +SS+V K V + G RH+ L D
Sbjct: 3013 KVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTVD---G 3067
Query: 201 QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG S+ + P++ L I I+ SAAL++ G LYTW
Sbjct: 3068 KVFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 260 GRGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHH 308
G G ++T+ + P+ + L Q A G L LT +G V G
Sbjct: 3125 GLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G L P + + L+G V QI GA+ S +T++ + TW
Sbjct: 3184 GKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 29/258 (11%)
Query: 168 SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
S +KV SF NV Q+A G + L + +VY G G+LG+ +V
Sbjct: 2979 SKIKVPSFSETLSALNVVQVAGGSKS---LFAVTVEGKVYACGEATNGRLGLGLSS-GTV 3034
Query: 224 SLPQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQSL 275
+P+ L + ++ V + + G + AL+ +G +++WG G + S +NC P+ +
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094
Query: 276 PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + A G +H LT GE+ G +G L + + +P + V L
Sbjct: 3095 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKP-----KMVKVL 3149
Query: 334 DGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
G +VIQ+A G+ + +T+ + +WG G+ G+LG G + P+ + E N
Sbjct: 3150 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI----ERLNG 3205
Query: 392 DTQLEVFCGSGFTYAISR 409
++ CG+ F+ A+++
Sbjct: 3206 QGVCQIECGAQFSLALTK 3223
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 126/327 (38%), Gaps = 87/327 (26%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V+ +AC L L+ G+V++ S D L P+ V
Sbjct: 454 VTQIACAEKRFLILSR-----NGRVYTQAYNS----------DTLAPQLVQGLASRNIVK 498
Query: 129 THISAGWNHSGFVSDSGCLFT--CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ +H ++ +G +++ CGDG G+LGHGD P +S+F
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDG--GRLGHGDTLPLEEPKVISAF----------- 545
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
SGK+G G H +V I+
Sbjct: 546 --------------------SGKQG-------------------GKH---VVHIACGSTY 563
Query: 247 SAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWN--HVLVLTG 296
SAA++AEG LYTWGRG S+ D P + L A G L +T
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+G+V G +G L P +EK+ +LD VI++ G++ S +T++
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQDLD---VIKVRCGSQFSIALTKDGQ 678
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +WG G++ +LG G +PK++
Sbjct: 679 VYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4160 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4218
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 144/322 (44%), Gaps = 22/322 (6%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+ + +A G +HVLA+ S G V+SWGR GQLG G D P+PV G +
Sbjct: 851 TYTQVAAGDSHVLAIGS-----NGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFK 905
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQ---LGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+SAG S + ++T G + G+ + R + +P + +H +
Sbjct: 906 AVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQ 965
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
+ S V+ D GN VY +G GQLG S + + + ISA
Sbjct: 966 VSLNWSFVMALDADGN-VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGS 1024
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS------SLSFSQAALGWNHVL 292
+ A+ +G+ +TWG G STSD PQ++ + SL +Q + G +H L
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSL 1084
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V+ DG + G + +G L V+ T+P ++ + + K ++ +AG HS +
Sbjct: 1085 VVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATIK-DPANKAQTFKAVRSSAGQLHSLAIR 1143
Query: 353 ENRAIMTWGWGEHGQLGLGNTC 374
++ + WG ++GQLG T
Sbjct: 1144 QDGNLWAWGDNQYGQLGNNQTA 1165
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 151/352 (42%), Gaps = 30/352 (8%)
Query: 50 GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
G H ++P +N ++ GG+ + + S G ++WG GQL
Sbjct: 777 GGQHVTITPPTINRGI--RFDQVSAGGSFSIGVAS-----DGNAYAWGNNKYGQLAQKPA 829
Query: 110 VDALYPKPV--TFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-- 163
++ PV DG +T T ++AG +H + +G +++ G GQLG G
Sbjct: 830 DVSMQKTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTD 889
Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS---GKRGQLGVSKDRI 220
R + PVK + Q++ G+ S + + N+VY +GS GK S R
Sbjct: 890 RYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSE---NRVYTWGSESTGKGQTPAYSTTRK 946
Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---------STSDVNC 271
+ V +S N AL A+G++YTWG N STS +
Sbjct: 947 NPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASN 1006
Query: 272 PQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P LPS S SQ + G H L + DG G + +G L D +P +V
Sbjct: 1007 PARLPSQSFQASQISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQ-NPT 1065
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+K QI+AG +HS VV + ++ WGW +GQLG+GNT +Q P +
Sbjct: 1066 DTSQSLKATQISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQTKPATI 1117
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 49/383 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP----QLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
++SWG+ GQLG G + P + +S + + G + L S
Sbjct: 254 NLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQASAGYLFSVGLGS-----D 308
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLF 148
GK++SWG + GQLG+ P+PV +T + G H+ + G L+
Sbjct: 309 GKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVGSLHALGLGSDGNLY 368
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
+ GD QLG G +P++V S F K Q++ HSL L D N
Sbjct: 369 SWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWK---QMSGWGWHSLALGSD---NW 422
Query: 202 VYGFGSGKRGQLG---VSKDRIRSVSL--PQVTIGLHDIEIVGISANGD-RSAALSAEGH 255
+YG+G+ RG++G ++ ++I V + PQ G+ G GD S A+ ++G+
Sbjct: 423 IYGWGANTRGEVGTGSITDNKITPVRIATPQ---GVPSNFTWGQFQMGDYYSQAIGSDGN 479
Query: 256 LYTW------GRGFNSTSDVNCPQS-------LPSSLSFSQAALGWNHVLVLTGDGEVLM 302
+YTW G ST DV P LP + S+ Q +L L + DG +
Sbjct: 480 IYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLP-NFSWKQVSLLSVASLAIGSDGNLYS 538
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV-VTENRAIMTWG 361
G +++G L D P+ VA + + G+ +Q +AG ++++ + + + +WG
Sbjct: 539 WGANNNGQLGDNTTTQRNTPIRVAAPQNAPT-GLTWVQASAGWDNNSFGLASDGNLYSWG 597
Query: 362 WGEHGQLGLGNTCDQIHPKVVNL 384
+GQLG T D+ P VN+
Sbjct: 598 KNANGQLGDNTTNDRHIPGRVNM 620
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS----PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
V++WG T+GQLG G D S P L S + S ++ G H LA+ +
Sbjct: 981 NVYTWGYNTNGQLGNG-TSDSTSYASNPARLPSQSFQA-SQISAGSWHALAIDT-----D 1033
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI--THISAGWNHSGFVSDSGCLF 148
G ++WG GQLG G D P+ V ++ T ISAG +HS V G L+
Sbjct: 1034 GNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLW 1093
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYG 204
G + GQLG G+ + + P + NK + + G HSL + +D GN ++
Sbjct: 1094 AWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQD--GN-LWA 1150
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
+G + GQLG ++ R+ + V + + G+
Sbjct: 1151 WGDNQYGQLGNNQTATRNTTPMPVAFDPTPLVLTGV 1186
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 138/334 (41%), Gaps = 39/334 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVS--MLACGGAHVLALTSPSSVIGGKV 93
V+SWG GQLG G D +PQ + + ++ G A A+ S + +V
Sbjct: 871 VYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSEN-----RV 925
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCLFT 149
++WG S+G+ G P D G +S W+ + G ++T
Sbjct: 926 YTWGSESTGK-GQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYT 984
Query: 150 CGDGTFGQLGHG-----DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G T GQLG+G Y S+ + + SF QI+ G H+L + D GN +
Sbjct: 985 WGYNTNGQLGNGTSDSTSYASNPARLPSQSF---QASQISAGSWHALAI--DTDGN-TWT 1038
Query: 205 FGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+G GQL G + D+ + ++ T ++ ISA D S + +G L+ WG
Sbjct: 1039 WGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWGWN 1098
Query: 263 FN------------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
N + + P + + +++ G H L + DG + G + +G
Sbjct: 1099 SNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDNQYGQ 1158
Query: 311 LSDPERVS-STRPLSVALEKVS-NLDGVKVIQIA 342
L + + + +T P+ VA + L GV+ IA
Sbjct: 1159 LGNNQTATRNTTPMPVAFDPTPLVLTGVRFGGIA 1192
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVG 239
Q++ G H L + D GN +Y +GS GQLG + +R V + + D V
Sbjct: 238 QVSAGRGHILAVASD--GN-LYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQ 294
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTS------DVNCPQSLPSSLSFSQAALG 287
SA S L ++G LY+WG G N+T+ VN PQ+ PS ++ Q A+G
Sbjct: 295 ASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQEAVG 354
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H L L DG + G + H L D P+ V + G Q++ H
Sbjct: 355 SLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPS-GVPSGFAWKQMSGWGWH 413
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCD-QIHP 379
S + + I WG G++G G+ D +I P
Sbjct: 414 SLALGSDNWIYGWGANTRGEVGTGSITDNKITP 446
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 276 PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
P + FSQ + G H+L + DG + G + HG L D P+ V + + D
Sbjct: 231 PRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQD- 289
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+Q +AG S + + + +WG +GQLG T P+ VNL
Sbjct: 290 FTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNL 338
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 231 GLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD------VNCPQSLPSS 278
G I +SA A++++G+LY+WG G +T++ V PQ +
Sbjct: 230 GPRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQD 289
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
++ QA+ G+ + L DG++ G + +G L + + P V L + + G
Sbjct: 290 FTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNA-PSGFTW 348
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
Q A G+ H+ + + + +WG +H QLG G T ++ P V +
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKM 394
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 114 bits (284), Expect = 1e-22, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 45 GQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQL 104
GQLG + P L + +ACG +H +ALT G++F+WG+ + GQL
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTD-----NGQIFTWGKNTRGQL 373
Query: 105 GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
G G D L P + T I +G HS F+SD L+T G+G + +LGHG
Sbjct: 374 GQGHRNDQLKPTMIII----EVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTT 429
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
P KV + V ++CGM H+L + + VY +G G G+LGV ++ +S+
Sbjct: 430 DELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGF---VYAWGDGMSGKLGVQENN-KSLH 485
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LP +SA G S AL+ +G LY+WG
Sbjct: 486 LP-----------TRVSAGGLHSMALTDQGILYSWG 510
Score = 92.0 bits (227), Expect = 5e-16, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG T GQLG G +D+L P ++ + +++ C G A S +++
Sbjct: 361 QIFTWGKNTRGQLGQGHRNDQLKPTMIIIEVMATS---ICSGDQHSAFISDEK----ELY 413
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G +LGHG D LYPK V + +TH+S G H+ +++ G ++ GDG
Sbjct: 414 TWGNGQYFRLGHGVTTDELYPKKVVVLED--VYVTHVSCGMTHTLAITNEGFVYAWGDGM 471
Query: 155 FGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LG + +S P +VS+ G HS+ L + +Y +GS K G L
Sbjct: 472 SGKLGVQENNKSLHLPTRVSA-----------GGLHSMALTDQGI---LYSWGSSKGGVL 517
Query: 214 GV--SKDRIRSVSLPQ 227
G+ +D SLPQ
Sbjct: 518 GIGFQRDNKDCYSLPQ 533
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 59/277 (21%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT---------------------FGQLGHGDYRSH 166
I H+S G +H+ ++D G +F G GT GQLG+ ++ +
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS--KDRIRSVS 224
P ++ + + Q+ACG HS+ L + Q++ +G RGQLG D+++
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDN---GQIFTWGKNTRGQLGQGHRNDQLK--- 383
Query: 225 LPQVTIGLHDIEIVGIS-ANGDR-SAALSAEGHLYTWGR------GFNSTSDVNCPQSLP 276
P + I IE++ S +GD+ SA +S E LYTWG G T+D P+ +
Sbjct: 384 -PTMII----IEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVV 438
Query: 277 --SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + + G H L +T +G V G G L E S +
Sbjct: 439 VLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPT---------- 488
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+++AG HS +T+ + +WG + G LG+G
Sbjct: 489 -----RVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520
Score = 72.0 bits (175), Expect = 5e-10, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 41/246 (16%)
Query: 164 RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
RS+ + +++ + + ++CG H+LV+ ++ FG G +G+L +
Sbjct: 254 RSYVNKTEINEEIKDGIKHVSCGHHHTLVITDQ---GTIFYFGMGTQGKLFL-------- 302
Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQ 283
L + +++ + + + L E + + T + P+ F Q
Sbjct: 303 --------LRECQLLLQNKSKIQKGQLGNENFVNV----YEPTELLVWPKR-----KFIQ 345
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G +H + LT +G++ G + G L R +P + +E V I +
Sbjct: 346 VACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMIIIE-------VMATSICS 398
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSG 402
G +HSA +++ + + TWG G++ +LG G T D+++P KVV L D + V CG
Sbjct: 399 GDQHSAFISDEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVT-----HVSCGMT 453
Query: 403 FTYAIS 408
T AI+
Sbjct: 454 HTLAIT 459
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 24/156 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G +LG G DEL P+ + + V+ ++CG H LA+T+ G V+
Sbjct: 411 ELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNE-----GFVY 465
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G SG+LG E +L+ T +SAG HS ++D G L++ G
Sbjct: 466 AWGDGMSGKLGVQENNKSLHLP------------TRVSAGGLHSMALTDQGILYSWGSSK 513
Query: 155 FGQLGHGDYRS----HSSPVK---VSSFVNKNVHQI 183
G LG G R +S P K V+ +KN QI
Sbjct: 514 GGVLGIGFQRDNKDCYSLPQKIRTVAKIQSKNPKQI 549
Score = 47.4 bits (111), Expect = 0.013, Method: Composition-based stats.
Identities = 68/326 (20%), Positives = 118/326 (36%), Gaps = 98/326 (30%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS------PQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
++W++G G LG HDE + P+++N + + LA G ++A+T
Sbjct: 863 EIWTFGTSDSGVLG----HDEKNYYVVSEPKMIN--DIPPMIFLASGPQGMMAITEQKR- 915
Query: 89 IGGKVFSWGRGSSGQLG------------HGEMVDA------------------------ 112
++++WG GQLG G +D
Sbjct: 916 ---QIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEIKQKEKKIDLDEQNKKIT 972
Query: 113 ----LY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
+Y P+ V + + I I G HS + D G L++CG F L +
Sbjct: 973 KNQIIYKPQKVKIENDRKIQIRQIGMGMFHSVAIDDLGHLYSCGLRKFSGLAESLSKEGL 1032
Query: 168 SP-------VKVSSFVNKNVHQIACGMRHSLVLLKDCLG---NQVYGFGSGKRGQLGVSK 217
S +K +N Q++ H+L L +D G N V+G+G G L +
Sbjct: 1033 SGFDDTFIYLKKDHMLNHQFQQVSVSEYHTLALTQDQTGEFNNVVFGWGLCNLGNLCLKD 1092
Query: 218 DRIRSVSLPQVTIGLHDIE--------------------------IVGISANGDRSAALS 251
+ ++ + + D + IV ISA + A++
Sbjct: 1093 QKEIQQAMKDMKYQMKDFDLNEPLKEMFTLPINLTQINKFKDCDNIVYISAGLMHNLAMN 1152
Query: 252 AEGHLYTWGRGFN-----STSDVNCP 272
G +++WG N ST+++N P
Sbjct: 1153 KNGKVFSWGSFQNGRLGISTTNLNLP 1178
Score = 38.5 bits (88), Expect = 6.7, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 18/173 (10%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN-CPQSLPSSLSFSQAALGW 288
+I+ +S + + A+S +G Y+WG G N PQ + +L + +
Sbjct: 790 KIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIMST 849
Query: 289 ---NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+LT GE+ G S G+L E+ V+ K+ N D +I +A+G
Sbjct: 850 CSDRFSALLTDKGEIWTFGTSDSGVLGHDEK----NYYVVSEPKMIN-DIPPMIFLASGP 904
Query: 346 EHSAVVTEN-RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 397
+ +TE R I WG +GQLG+ T + ++ + G + D+Q E+
Sbjct: 905 QGMMAITEQKRQIYAWGNNLYGQLGIQITNNNMN--MNQFGPDIDIDDSQDEI 955
>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 180/408 (44%), Gaps = 68/408 (16%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG G G+LG G L P+L+N SS S++ ++CGGAH L LT G+V++
Sbjct: 35 WGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTET-----GRVYAT 89
Query: 97 GRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GQLG + P V+ G + I ISAG++HS ++ G L+T G +
Sbjct: 90 GLNDFGQLGVSNNTTYCMEPLEVS---GLKKEIVQISAGYHHSCAITVDGELYTWGKNSN 146
Query: 156 GQLGHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + PV KV N+ +A HS+ + G Q +G G G+L
Sbjct: 147 GQLGLGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTD---GGQALSWGGGGSGRL 203
Query: 214 GVSKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
G R S P+ L +++ I+A SA + G +Y +G
Sbjct: 204 GHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDK 263
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSD------ 313
F ++ P S+ L +SQ A G H V+T GE+ G + +G L +
Sbjct: 264 LAFGDANNATTP-SMIGKLPYSQEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVL 322
Query: 314 --PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG-------- 363
PERV L +EKVS G +H+A ++E + TWGWG
Sbjct: 323 HIPERVEGPF-LRSPVEKVS-----------CGWKHTAAISEGN-VFTWGWGGSHGTFSE 369
Query: 364 ----EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLG G+ D ++P +V F+ + LEV CG T AI
Sbjct: 370 DGLSSGGQLGHGDDFDYVNPTLV----AFEKKMKALEVSCGFNHTGAI 413
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 143/333 (42%), Gaps = 34/333 (10%)
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LG+G + PK + H + IS G H+ F++++G ++ G F
Sbjct: 35 WGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYATGLNDF 94
Query: 156 GQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG + ++ P++VS + K + QI+ G HS + D ++Y +G GQLG
Sbjct: 95 GQLGVSNNTTYCMEPLEVSG-LKKEIVQISAGYHHSCAITVD---GELYTWGKNSNGQLG 150
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------------- 261
+ K V +P L I I ++ + S A++ G +WG
Sbjct: 151 LGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTDGGQALSWGGGGSGRLGHGHQSS 210
Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
GF +S P+ + + A G H + +G V + G L+ +
Sbjct: 211 LLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDAN 270
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
++T P + S ++A G H+ V+T + TWG E+G LG G + D +
Sbjct: 271 NATTPSMIGKLPYSQ-------EVACGGYHTCVITSGGELYTWGSNENGCLGNG-SIDVL 322
Query: 378 H-PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
H P+ V F R +V CG T AIS
Sbjct: 323 HIPERVE--GPFL-RSPVEKVSCGWKHTAAISE 352
>gi|387928890|ref|ZP_10131567.1| regulator of chromosome condensation-like protein [Bacillus
methanolicus PB1]
gi|387585708|gb|EIJ78032.1| regulator of chromosome condensation-like protein [Bacillus
methanolicus PB1]
Length = 641
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 162/363 (44%), Gaps = 37/363 (10%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ +SWG GQLG G D P +N S +S+++ G H L++ S G V
Sbjct: 1 MTTFSWGNNEFGQLGDGTNIDSNVPVSVN-GSTNSIAITG-GIFHSLSVLS-----DGLV 53
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG SGQLG G + D+ P+ VT ++AG HS + + + GD
Sbjct: 54 CAWGANYSGQLGDGTLNDSNIPEIVTAL----TNAIEVAAGVFHSLALLSNSTVRAWGDN 109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + S + PV V N I+ G+ HSL LL D V +G GQL
Sbjct: 110 FAGQLGDGTFNSSTVPVSVIGLTNA--IAISAGLNHSLALLND---GTVRAWGGNFFGQL 164
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNC 271
G D + P + +GL ++ V +SA G+ S AL +G + WG ++ N
Sbjct: 165 GNGTDITSNA--PVIILGLSNV--VAVSAGGEHSLALLYDGTVCAWGANYSGQLGDGTNT 220
Query: 272 PQSLPSSL----------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+S+P + + + G H L L DG VL G + +G L D S
Sbjct: 221 DRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLNDGTVLAWGNNDYGQLGDGTNTESNV 280
Query: 322 PLSVALEKVSNLDGV--KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P+ V K + GV V IAAG HS + + ++ WG E GQLG G+ D P
Sbjct: 281 PVQV---KGTGGYGVLNNVAAIAAGGFHSLALLNDGTVLAWGNNESGQLGDGSNSDSDIP 337
Query: 380 KVV 382
V
Sbjct: 338 VTV 340
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 150/327 (45%), Gaps = 37/327 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V +WGA GQLG G L+D P++ +++L++ +A G H LAL S S+ V +
Sbjct: 53 VCAWGANYSGQLGDGTLNDSNIPEI--VTALTNAIEVAAGVFHSLALLSNST-----VRA 105
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG +GQLG G + P V G I ISAG NHS + + G + G F
Sbjct: 106 WGDNFAGQLGDGTFNSSTVPVSVI---GLTNAIA-ISAGLNHSLALLNDGTVRAWGGNFF 161
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G + ++PV + NV ++ G HSL LL D V +G+ GQLG
Sbjct: 162 GQLGNGTDITSNAPVIILGL--SNVVAVSAGGEHSLALLYD---GTVCAWGANYSGQLGD 216
Query: 216 SKDRIRSVSLPQVTIGLHDI--EIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ RS+ + IG + ++ ISA S AL +G + WG G + +
Sbjct: 217 GTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLNDGTVLAWGNNDYGQLGDGTNT 276
Query: 268 DVNCPQSLPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+ N P + + + + A G H L L DG VL G + G L D S
Sbjct: 277 ESNVPVQVKGTGGYGVLNNVAAIAAGGFHSLALLNDGTVLAWGNNESGQLGDGSNSDSDI 336
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHS 348
P++V+ SN IA G +HS
Sbjct: 337 PVTVSGLTNSN-------TIAGGGDHS 356
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSS---LSSVSMLACGGAHVLALTSPSSVIGG 91
V +WGA GQLG G D P Q+ + L++V ++ G H LAL + G
Sbjct: 203 VCAWGANYSGQLGDGTNTDRSIPVQVKGIGGSGVLNNVIAISAGEFHSLALLN-----DG 257
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY--TITHISAGWNHSGFVSDSGCLFT 149
V +WG GQLG G ++ P V G+ + I+AG HS + + G +
Sbjct: 258 TVLAWGNNDYGQLGDGTNTESNVPVQVKGTGGYGVLNNVAAIAAGGFHSLALLNDGTVLA 317
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
G+ GQLG G PV VS N N IA G HSL
Sbjct: 318 WGNNESGQLGDGSNSDSDIPVTVSGLTNSN--TIAGGGDHSL 357
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 168/396 (42%), Gaps = 83/396 (20%)
Query: 4 PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
P + +T +GK I E +V+S G ++GQ G G + DE P+++
Sbjct: 35 PTLSQTSRGKD--IVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEI-DETVPEMV-- 89
Query: 64 SSLSSVSML---------------ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
SL+ V++ G H++ +T G++ + GR +SGQLGHGE
Sbjct: 90 PSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEE-----GELQTCGRNNSGQLGHGE 144
Query: 109 MVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167
+ P+PV F G+R +T ++ ++H+ V+D +T G +GQLGHGD+ S S
Sbjct: 145 VGKGYSLPRPVAGFAGYR--VTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRS 202
Query: 168 SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227
+P ++ F V +ACG+ H++V + +Y FG GQLG+ R
Sbjct: 203 APAALACFQGLGVLSVACGVYHTVVSVAS---GGLYSFGKNDHGQLGLEGGESR------ 253
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG 287
F C + Q A G
Sbjct: 254 -----------------------------------FTPVQHRACTSVV------EQLACG 272
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+ H + L+ GEV+ G + +G L R S+ + +V +L G+++IQ+A G+ H
Sbjct: 273 YYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQG-----GQVPDLAGLRIIQVACGSYH 327
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ + + + +G HGQLG G D P V
Sbjct: 328 TISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVE 363
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 171/390 (43%), Gaps = 72/390 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G +G P+L+ + V +A G H A+T + G++F
Sbjct: 281 EVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVT-----VSGELF 335
Query: 95 SWGRGS-SGQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WG G GQL + +P K + DG ++ I+ G H+ ++ SG L+T GD
Sbjct: 336 EWGEGPHMGQLD-CYANNLWFPHKLFSPLDG--ISVVKIACGPWHTAIITSSGQLYTYGD 392
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL---LKDCLGN----QVYGF 205
GTFG LGHGD + + P +V V +ACG H+ + L D N +++ +
Sbjct: 393 GTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTW 452
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G RG+LG + +++ + P L D +
Sbjct: 453 GDADRGKLGHADKKMKLI--PTCVDSLTDYD----------------------------- 481
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
F Q + G +VL+ G V +G S HG L +P T
Sbjct: 482 ---------------FIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRT---VC 523
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
A+E + + V+ I++G+ H AV+T N + TWG G+ GQLGLG+ ++ P +V
Sbjct: 524 AVEGLLKTEFVR--HISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLV--- 578
Query: 386 DEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
D + R + + CG +T A+ H + S+
Sbjct: 579 DALEGRQVE-SISCGYNYTAAVCLHKIISR 607
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F GD FG + D S S P+ V S +V IACG H+ ++ K +VY +G
Sbjct: 231 VFFWGDA-FGSILDYDDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQ---GEVYSWG 286
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
+ G +G ++ I+ VS P++ + + + ++ + A++ G L+ WG G +
Sbjct: 287 NESSGGIG-NQVNIK-VSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPH-M 343
Query: 267 SDVNC-------PQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
++C P L S L S + A G H ++T G++ G G+L +
Sbjct: 344 GQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT 403
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE----------NRAIMTWGWGEHG 366
+TRP ++V L G +V +A G H+A + E + TWG + G
Sbjct: 404 QGTTRP-----KEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRG 458
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+LG + ++ P V D + D ++V CG T +S
Sbjct: 459 KLGHADKKMKLIPTCV---DSLTDYDF-IQVSCGMALTVVLS 496
>gi|149720067|ref|XP_001501726.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Equus caballus]
Length = 444
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 168/398 (42%), Gaps = 45/398 (11%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ LN V + GG H +T GG +F G
Sbjct: 3 GANSYGQLGLGHKEDVLLPQQLNDFCKPGCVRRITGGGGHSAVVTD-----GGSLFVCGL 57
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D LY P G I ++ GW+ + ++ +G + +CG +FGQL
Sbjct: 58 NKDGQLGLGHTEDVLYFTPCRSLLG--CPIQQVACGWDFTIILTGNGQVLSCGSNSFGQL 115
Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQL 213
G HG R P + K V IA G+RH+L + Q +G G SG+R
Sbjct: 116 GVPHGPRRC-VVPQAIEPLREKVV-SIAAGLRHALAATASGIVFQ-WGTGLASSGRRLCP 172
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSD 268
G + + P GL D + + A D SA+L+ G LY WG + +
Sbjct: 173 GETLPLFLTAKEPSRVTGLEDSKATCVVAGSDHSASLTDAGELYVWGSNKHGQLASQAAF 232
Query: 269 VNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-----------D 313
+ PQ + + + GW H++ T G+V G + +G L D
Sbjct: 233 LPVPQKIEAHCFQHEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLESHENWRLD 292
Query: 314 PERVS--STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +S RP + L G +++ G+EH+ V A +WGW EHG G G
Sbjct: 293 MQGLSLPCPRPQKSTPSPLHCLTGA--TEVSCGSEHNLAVIGG-ACYSWGWNEHGMCGDG 349
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 350 TEANIWAPKPV----QSLRLSSGLLVGCGAGHSLALCQ 383
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 42/100 (42%), Gaps = 22/100 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE---LSPQLLNLSS-------------LSSVSMLACGGAH 78
KV++WG GQLG E L Q L+L L+ + ++CG H
Sbjct: 267 KVFTWGRADYGQLGRKLESHENWRLDMQGLSLPCPRPQKSTPSPLHCLTGATEVSCGSEH 326
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
LA VIGG +SWG G G G + PKPV
Sbjct: 327 NLA------VIGGACYSWGWNEHGMCGDGTEANIWAPKPV 360
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG+ GQL + + PQ + V+ + G H++A T GK
Sbjct: 214 ELYVWGSNKHGQLASQAAFLPV-PQKIEAHCFQHEKVTAVWSGWTHLVAQTET-----GK 267
Query: 93 VFSWGRGSSGQLG-------------HGEMVDALYPKPVTFFDGHRYT-ITHISAGWNHS 138
VF+WGR GQLG G + P+ T H T T +S G H+
Sbjct: 268 VFTWGRADYGQLGRKLESHENWRLDMQGLSLPCPRPQKSTPSPLHCLTGATEVSCGSEHN 327
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
V C ++ G G G G + +P V S + + CG HSL L +
Sbjct: 328 LAVIGGAC-YSWGWNEHGMCGDGTEANIWAPKPVQSLRLSSGLLVGCGAGHSLALCQ 383
>gi|410973279|ref|XP_003993081.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
nucleotide exchange factor [Felis catus]
Length = 462
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 134/292 (45%), Gaps = 25/292 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG S GQLG G D L P+ + F + I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDF-CKPECVRRITGGGGHSAIVTDEGGLFVCGL 75
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G S + V Q+ACG +++L ++ QV GS GQ
Sbjct: 76 NKDGQLGLGHTEDVLYFTTCRSLLGCPVQQVACGWDFTIILTEN---GQVLSCGSNSFGQ 132
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LGV R V +PQ I L ++V I+A + A +A G ++ WG G S+ CP
Sbjct: 133 LGVPHGPRRCV-VPQA-IELLKEKVVCIAAGLRHALAATASGIVFQWGTGLASSGRRLCP 190
Query: 273 -QSLPSSLSFSQAA--------------LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
Q+LP L+ + + G +H LT GE+ + G + HG L+ +
Sbjct: 191 GQTLPLFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLAS---L 247
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ PL +E KV + +G H TE + TWG ++GQLG
Sbjct: 248 AAFLPLPQKIE-AHCFQNEKVTSVWSGWTHLVAQTETGRVFTWGRADYGQLG 298
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 175/417 (41%), Gaps = 47/417 (11%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHV 79
+P+ E E V+ ++WGA + GQLG G D L PQ LN V + GG H
Sbjct: 4 EPRASEAAHEAAVL--FAWGANSYGQLGLGHKEDVLLPQQLNDFCKPECVRRITGGGGHS 61
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T G +F G GQLG G D LY G + ++ GW+ +
Sbjct: 62 AIVTDE-----GGLFVCGLNKDGQLGLGHTEDVLYFTTCRSLLG--CPVQQVACGWDFTI 114
Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++++G + +CG +FGQLG HG R + + + V IA G+RH+L
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVVP--QAIELLKEKVVCIAAGLRHALAATASG 172
Query: 198 LGNQVYGFG---SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+ Q +G G SG+R G + + P GL + + + A D SA+L+ G
Sbjct: 173 IVFQ-WGTGLASSGRRLCPGQTLPLFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAG 231
Query: 255 HLYTWGRGFNS-----TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGG 305
LY WG + + + PQ + + ++ GW H++ T G V G
Sbjct: 232 ELYVWGSNKHGQLASLAAFLPLPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGRVFTWGR 291
Query: 306 SHHGML-------------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ +G L S + + P + L G +++ G+EH+ V
Sbjct: 292 ADYGQLGRKLESREGWKLQSHDSSLPCSGPQKSMPSCLHCLTGAA--EVSCGSEHNLAVI 349
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+WGW EHG G G+ + PK V Q+ L V CG+G + A+ +
Sbjct: 350 -GGTCYSWGWNEHGMCGDGSEANIWAPKPV---PSLQS-SLGLLVGCGAGHSLALCQ 401
>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 58/399 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG GQLG G + SPQL+ + +V +AC + A+ GK++
Sbjct: 31 QLYAWGWNNFGQLGIGNSISQYSPQLV---PIQNVLFVACKSSVSAAIDK-----SGKLY 82
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR G LG+G++ + P V +++ G H ++ G L+T G+
Sbjct: 83 TWGRSKFGLLGNGQVENINIPTLVECLK--HLDFKYVACGNYHMAAITRDGQLYTWGNQD 140
Query: 155 FGQLGHG-------------DYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLG 199
G+LGH +Y+ + K+ V N VHQ++ G + +L+L D G
Sbjct: 141 HGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDD--G 198
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
N VY G K+G LG +S Q++ + I+ I + D S AL ++G+++ W
Sbjct: 199 N-VYSVGLNKKGILGYETKNAEELSFKQIS---NLKNIIQIDSGTDFSVALDSDGNMFAW 254
Query: 260 GRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G + S S + PQ + Q + G + L+ DG + G G L
Sbjct: 255 GSNYFGQLGTPSPSVIQTPQQIKGLPKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGT 314
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P + P ++ + N+D +++ G H +++ N+ M G G+ GQLG G+
Sbjct: 315 PSKQDIPTPHKISFDH--NID-----KVSCGQAHVGIISNNKLYMH-GRGKEGQLGRGSE 366
Query: 374 CD-----QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ + P +V + L++ CG ++AI
Sbjct: 367 TESPNSSRYSPLLV--------LENVLKIACGGSHSFAI 397
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 128/317 (40%), Gaps = 51/317 (16%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++++WG + GQLG G + P+ V + ++ + S + SG L+T G
Sbjct: 31 QLYAWGWNNFGQLGIGNSISQYSPQLVPI-----QNVLFVACKSSVSAAIDKSGKLYTWG 85
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FG LG+G + + P V + + +ACG H + +D Q+Y +G+ G
Sbjct: 86 RSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRD---GQLYTWGNQDHG 142
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
+LG S D + LP S E + Y G
Sbjct: 143 KLGHSFDNL--AKLP------------------------SREKYEYQKNLG-----SAKL 171
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P+ + + Q +LG L+L+ DG V +G + G+L + ++ +++S
Sbjct: 172 PELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILG----YETKNAEELSFKQIS 227
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
NL +IQI +G + S + + + WG GQLG + P V+ + +
Sbjct: 228 NLK--NIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPS------PSVIQTPQQIKGL 279
Query: 392 DTQLEVFCGSGFTYAIS 408
+ CG F A+S
Sbjct: 280 PKIKQFSCGEQFIGALS 296
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 161/358 (44%), Gaps = 33/358 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW WG GQLG G D +P + +S L S V+ +A GG H ALT G V
Sbjct: 226 EVWCWGGNNYGQLGDGSYTDSSTP--VAVSGLPSGVTAIAAGGVHTCALTGS-----GGV 278
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG SGQLG+G P V+ G +T I+AG H+ ++ SG ++ G
Sbjct: 279 RCWGANYSGQLGNGLTFGRSTPGAVS---GLPSGVTAIAAGDYHTCALTGSGGVWCWGGN 335
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + S+PV VS V IA G H+ L+ V +G RGQL
Sbjct: 336 YSGQLGDGTTTARSTPVAVSGL-PSGVETIAAGDYHTCALMSS---GGVRCWGHNDRGQL 391
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G RS P GL + I+A + A ++ G ++ WG G S +
Sbjct: 392 GDGTTTARST--PVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFT 448
Query: 268 DVNCPQSLPSSLSFSQ--AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D + P ++ S + AA GW H LTG G V G ++ G L D + P++V
Sbjct: 449 DSSTPVAVSGLASGVETIAAGGW-HTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAV 507
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L V IAAG H+ +T + + WG GQLG G T D+ P V+
Sbjct: 508 -----SGLP-SGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVS 559
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 161/356 (45%), Gaps = 31/356 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG G+LG G D +P + +S L S V+ +A GGAH ALTS G+V+
Sbjct: 74 VWCWGGNDFGRLGDGSYTDSSTP--VAVSGLPSGVTAIAAGGAHTCALTSS-----GEVW 126
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G P V+ G +T I+AG H+ + SG ++ G
Sbjct: 127 CWGSNFYGQLGDGSYTTRSTPVAVS---GLPSGVTAIAAGGWHTCARTSSGGVWCWGGNY 183
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S+PV VS ++ V IA G H+ + +V+ +G GQLG
Sbjct: 184 RGQLGDGTTTDRSTPVAVSGLPSE-VTAIAAGDAHTCARMSS---GEVWCWGGNNYGQLG 239
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCP 272
S P GL + I+A G + AL+ G + WG ++ + +
Sbjct: 240 --DGSYTDSSTPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFG 296
Query: 273 QSLPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+S P ++S + A G H LTG G V GG++ G L D + + P++
Sbjct: 297 RSTPGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVA--- 353
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L V IAAG H+ + + + WG + GQLG G T + P V+
Sbjct: 354 --VSGLP-SGVETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVS 406
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 157/353 (44%), Gaps = 34/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG +DGQLG G D +P + +S L+S V +A GG H ALT G V+
Sbjct: 431 VWCWGDNSDGQLGDGSFTDSSTP--VAVSGLASGVETIAAGGWHTCALTGS-----GGVW 483
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR +SGQLG G + + P V+ G +T I+AG H+ ++ SG ++ G
Sbjct: 484 CWGRNNSGQLGDGSTIYHITPVAVS---GLPSGVTAIAAGGVHTCALTGSGGVWCWGGNF 540
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S+PV VS V IA G H+ L V+ +G GQLG
Sbjct: 541 AGQLGDGTTTDRSTPVAVSGL-PSGVTAIAAGDIHTCALTGS---GGVWCWGGNDFGQLG 596
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNST 266
RS P GL + I+A + AL+ G ++ WG G S
Sbjct: 597 DGTTTNRST--PVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSR 653
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
S LPS ++ + AA GW + T G V G + G L D + P++V
Sbjct: 654 STPVAVSGLPSGVT-AIAAGGW-YTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAV- 710
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
S L V IAAG EH+ + + + WG + GQLG G + P
Sbjct: 711 ----SGLP-SGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTP 758
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 152/348 (43%), Gaps = 35/348 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G +P + +S L S V +A G H AL S G V
Sbjct: 329 VWCWGGNYSGQLGDGTTTARSTP--VAVSGLPSGVETIAAGDYHTCALMSS-----GGVR 381
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G P V+ G +T I+AG H+ + SG ++ GD +
Sbjct: 382 CWGHNDRGQLGDGTTTARSTPVAVS---GLPSGVTAIAAGRLHTCARTSSGGVWCWGDNS 438
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + S+PV VS + V IA G H+ L V+ +G GQLG
Sbjct: 439 DGQLGDGSFTDSSTPVAVSGLAS-GVETIAAGGWHTCALTGS---GGVWCWGRNNSGQLG 494
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSD 268
D + V + + I+A G + AL+ G ++ WG F +T+D
Sbjct: 495 ---DGSTIYHITPVAVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTD 551
Query: 269 VNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P LPS + + A G H LTG G V GG+ G L D + + P++
Sbjct: 552 RSTPVAVSGLPSGV--TAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVA- 608
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
VS L V IAAG ++ +T + + WG+ GQL G T
Sbjct: 609 ----VSGLP-SGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTT 651
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 149/344 (43%), Gaps = 42/344 (12%)
Query: 51 RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV 110
RLH + S L V+ +A GG H A TS G V+ WG G+LG G
Sbjct: 43 RLHTS------SFSPLQGVTAIAAGGGHTCARTSS-----GGVWCWGGNDFGRLGDGSYT 91
Query: 111 DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
D+ P V+ G +T I+AG H+ ++ SG ++ G +GQLG G Y + S+PV
Sbjct: 92 DSSTPVAVS---GLPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPV 148
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQV 228
VS V IA G H+ V+ +G RGQL G + DR S P
Sbjct: 149 AVSGL-PSGVTAIAAGGWHTCARTSS---GGVWCWGGNYRGQLGDGTTTDR----STPVA 200
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP---QSLPSSL 279
GL E+ I+A + A + G ++ WG G S +D + P LPS +
Sbjct: 201 VSGLPS-EVTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGV 259
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ A G H LTG G V G ++ G L + + P VS L V
Sbjct: 260 --TAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTP-----GAVSGLP-SGVT 311
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
IAAG H+ +T + + WG GQLG G T + P V+
Sbjct: 312 AIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVS 355
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 154/359 (42%), Gaps = 35/359 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW WG+ GQLG G +P + +S L S V+ +A GG H A TS G V
Sbjct: 124 EVWCWGSNFYGQLGDGSYTTRSTP--VAVSGLPSGVTAIAAGGWHTCARTSS-----GGV 176
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG GQLG G D P V+ G +T I+AG H+ SG ++ G
Sbjct: 177 WCWGGNYRGQLGDGTTTDRSTPVAVS---GLPSEVTAIAAGDAHTCARMSSGEVWCWGGN 233
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLG G Y S+PV VS V IA G H+ L V +G+ GQL
Sbjct: 234 NYGQLGDGSYTDSSTPVAVSGL-PSGVTAIAAGGVHTCALTGS---GGVRCWGANYSGQL 289
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
G RS P GL + I+A + AL+ G ++ WG ++ +T+
Sbjct: 290 GNGLTFGRST--PGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTT 346
Query: 268 DVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ P LPS + A G H L G V G + G L D + + P++
Sbjct: 347 ARSTPVAVSGLPSGV--ETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVA 404
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L V IAAG H+ T + + WG GQLG G+ D P V+
Sbjct: 405 -----VSGLP-SGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVS 457
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG GQL G + L S V+ +A GG + A TS G V
Sbjct: 635 VWCWGYNLSGQLDDGTTSRSTPVAVSGLPS--GVTAIAAGGWYTCARTSS-----GGVRC 687
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SGQLG G P V+ G +T I+AG H+ + SG ++ G
Sbjct: 688 WGANGSGQLGDGTTTKRSTPVAVS---GLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDS 744
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVH 181
GQLG G ++PV V + + V+
Sbjct: 745 GQLGDGRPLYRTTPVDVVTSASWGVY 770
>gi|432095555|gb|ELK26701.1| Secretion-regulating guanine nucleotide exchange factor, partial
[Myotis davidii]
Length = 442
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 172/416 (41%), Gaps = 54/416 (12%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D PQ LN V +A GG H +T GG +F G
Sbjct: 1 GANSYGQLGLGHKEDVFLPQQLNDFCKPECVRRIAGGGGHSAVVTD-----GGSLFVCGL 55
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G M D LY P G I ++ GW+ + ++++G + +CG +FGQL
Sbjct: 56 NKDGQLGLGHMEDVLYFTPCKSLIG--CPIQQVACGWDFTIILTENGQVLSCGSNSFGQL 113
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQLGV 215
G + + + V IA G+RH+L + Q +G G SG+R
Sbjct: 114 GVPHGPGKCVVPQAIELLKEEVVSIAAGLRHALAATASGIVFQ-WGTGLASSGRRLCPEQ 172
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVN 270
+ + P GL + + + + A D SA+L+ G LY WG + + +
Sbjct: 173 TLPLFLTAKEPGRVPGLENSKAICVVAGSDHSASLADSGELYVWGSNKHGQLASQAAFLP 232
Query: 271 CPQSLPSSLSFSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSD---------PER 316
PQ + + F + + GW H++ TG G+V G + +G L PE+
Sbjct: 233 VPQKI-EAHCFQKEKVTAVWSGWTHLVAQTGTGKVFTWGRADYGQLGRKLESEEGWRPEK 291
Query: 317 VSSTRPLSVALE-------------KVSNLDGVKVIQIAAGAEHSAVV----TENRAIMT 359
S P S E +VS+ + + HS + T A +
Sbjct: 292 QGSPLPCSRPWESTPSSLHCLTGATEVSSAFLLPPFPLTVSWCHSPGLGTRPTPGGACYS 351
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR-HCLPS 414
WGW EHG G G+ D PK V + L V CG+G + A+ + LPS
Sbjct: 352 WGWNEHGMCGDGSEADVQAPKPV----QALQSSPGLLVGCGAGHSLALCQLPALPS 403
>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2131
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 173/420 (41%), Gaps = 96/420 (22%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ L+ P + QQVV V + G G+ G+LG G D
Sbjct: 1137 EAGRNILVPTTAPSFSQA---QQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-- 1191
Query: 57 SPQLLNLSSLSSVS-------MLACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L L+ +S++ + +CG H +ALT G+VFSWG G G+LGHG
Sbjct: 1192 ---LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLGHGN 1243
Query: 109 MVDALYPKPVTFFDG---------------------HRYTITHISAGWNHSGFVSDSGCL 147
P+ + G H + +S G+ HS V+ G L
Sbjct: 1244 SDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKL 1303
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA---CGMRHSLVLLKDCLGNQVYG 204
FT G+G +G+LG G+ + P +V++ + Q+A CG+ H+LV+ D G V+
Sbjct: 1304 FTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGLNHTLVVSAD--GMMVWA 1361
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
FG G G+LG+ +S PQV + +S L E +
Sbjct: 1362 FGDGDYGKLGLGNSTAKSS--PQVWAVIL------------QSPTLCQELKV-------- 1399
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
DV C +S + A G + LT DG V G L + + RP
Sbjct: 1400 ---DVLC------GISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRP-- 1448
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+++ L GV V +A GAEH+ ++ + WG GQLGLG+T P VV +
Sbjct: 1449 ---QQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTM 1505
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQL-------------LNLSSLSSVSM--LACGGAHVL 80
VW++G G G+LG G + SPQ+ L + L +S+ +ACG +
Sbjct: 1359 VWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSV 1418
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
ALT G+VF++G+ L + P+ + G + ++ G H+
Sbjct: 1419 ALTK-----DGRVFTFGQDRLIGLPESRARNHNRPQQLPALSG--VHVQDVAVGAEHTLA 1471
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S +G ++ G + GQLG G P V+ K++HQ++ G HS
Sbjct: 1472 LSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCHS 1521
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 29/142 (20%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI----AAGA 345
H + LT GEV G +G L RP ++ L G +V+Q+ AAGA
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVVQVGRGRAAGA 1272
Query: 346 -------------------EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+HSAVVT + + T+G G++G+LGLGNT ++ P+ V +
Sbjct: 1273 GLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALE 1332
Query: 387 EFQNRDTQLEVFCGSGFTYAIS 408
+Q V CG T +S
Sbjct: 1333 GYQIGQVA-NVACGLNHTLVVS 1353
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+++G L R + PQ L S V +A G H LAL+S G V+
Sbjct: 1425 RVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHTLALSS-----TGDVY 1479
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+WG S GQLG G P VT G I +SAG HS
Sbjct: 1480 AWGSNSEGQLGLGHTNHVREPTVVTMLQGKH--IHQVSAGRCHSA 1522
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 141/322 (43%), Gaps = 37/322 (11%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD---ALYPKPVTFFDGHRYTI 128
L+CG H +++ G V++WG+ G+LGHG++++ P V HR +
Sbjct: 35 LSCGQHHTAVVSA-----SGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKV 89
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
++ G H+ + G +++ G +GQLG GD + H+ PV V+ +K + CG
Sbjct: 90 LSVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHY 148
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
HSL L D QVY +G G GQLG+ D I LP L + ++A +A
Sbjct: 149 HSLALSAD---QQVYSWGWGVHGQLGL--DSIEDALLPSHVTSLSGAFVTQLAAGYSHTA 203
Query: 249 ALSAEGHLYTW--GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
L+ EG +YT+ G Q+LP V L D L+ GS
Sbjct: 204 VLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQL------------VQALEKDRIYLICCGS 251
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
+ VSS + L + + I G H VTE R + TWG+ +HG
Sbjct: 252 FETV-----AVSSEQKL---FNWGRSPHYFRFHMIHCGNWHYLAVTEARQVFTWGFNDHG 303
Query: 367 QLGLGNTCDQ-IHPKVVNLGDE 387
QLG + D + P VV +E
Sbjct: 304 QLGHSTSMDHLLFPTVVQKLNE 325
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG+ GQLG G P + S + CG H LAL++ +V+S
Sbjct: 107 VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQ-----QVYS 161
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF------- 148
WG G GQLG + DAL P VT G +T ++AG++H+ ++ G ++
Sbjct: 162 WGWGVHGQLGLDSIEDALLPSHVTSLSG--AFVTQLAAGYSHTAVLTTEGKVYTFGGGLY 219
Query: 149 ------TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV------------------HQIA 184
T T QL + + SF V H I
Sbjct: 220 GQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWGRSPHYFRFHMIH 279
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG H L + + QV+ +G GQLG S + + P V L++ + S
Sbjct: 280 CGNWHYLAVTE---ARQVFTWGFNDHGQLGHSTS-MDHLLFPTVVQKLNESFVATASVGA 335
Query: 245 DRSAALSAEGHLYTWGR 261
+ S A+ A G ++ WGR
Sbjct: 336 EFSVAMDATGQVWVWGR 352
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 238 VGISANGDRSAALSAEGHLYTWGRGFNST---SDVNCPQ--SLP--------SSLSFSQA 284
V +S +A +SA G +YTWG+ D+ + S+P +
Sbjct: 33 VRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSV 92
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
A G H L L DG V G S +G L + TRP+ V+ L K I + G
Sbjct: 93 ACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPV-----YVTELSDKKCIAVVCG 146
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
HS ++ ++ + +WGWG HGQLGL + D + P
Sbjct: 147 HYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLP 181
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 170/403 (42%), Gaps = 79/403 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG ++GQLG G P ++L + ++ L+ G+H +AL + G ++
Sbjct: 622 SVWTWGENSNGQLGDGTTTARPVPARVSLPA--TLVALSTRGSHTVALDTT-----GMLW 674
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR SGQLG+G +V P+ V F + ++G + + G ++ GD +
Sbjct: 675 AWGRNVSGQLGNGTLVSESTPRRVPSF----ARVQGFASGLRTTFALRADGTVWAWGDNS 730
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG+G + +SPV V + +A G +H L + D V+ FGS RGQLG
Sbjct: 731 LGQLGNG--ATSASPVPVQAVGYPRTVPLASGAQHVLAVSSD---GSVFSFGSNSRGQLG 785
Query: 215 ---------------------VSKDRIRSVSL---------------------------P 226
V+ + S++L P
Sbjct: 786 YEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAP 845
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLS 280
GL +V I+A D + A+ A+G ++ WG G +T+ P + +
Sbjct: 846 ARVPGL--AHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVD 903
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A G H L + DG V G + G L D S T P+ VS L GV+ I
Sbjct: 904 VVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPV-----FVSTLSGVQAI- 957
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
A+GA+HS + E + WG GQLG G T + P V+
Sbjct: 958 -ASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVS 999
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 150/355 (42%), Gaps = 39/355 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG SP + ++ + +A G H LAL S G V++
Sbjct: 471 VWAWGDNAYGQLGDTSGGRRPSPA--QVPGVAGATEIAAGTYHSLALRSD-----GTVWT 523
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQLG G P+ G ITH++AG HS + SG ++ GD +
Sbjct: 524 WGDNSYGQLGAGATPRG--PRAPAVVPG-LAVITHVAAGLFHSLALDSSGQVWAWGDNVY 580
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S + P +VS + I G +S+ L D V+ +G GQLG
Sbjct: 581 GQLGDGSTTSRNVPGRVSGL-PAGIQAIVAGPSYSVALGAD---GSVWTWGENSNGQLGD 636
Query: 216 SKDRIRS----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
R VSLP +V +S G + AL G L+ WGR G +
Sbjct: 637 GTTTARPVPARVSLPAT--------LVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGT 688
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P+ +PS A G L DG V G + G L + +S P
Sbjct: 689 LVSESTPRRVPSFARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVP--- 745
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
V + + + +A+GA+H V+ + ++ ++G GQLG + Q P+
Sbjct: 746 ----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPR 796
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 156/348 (44%), Gaps = 37/348 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G L +P + +S L+ + LA GG+H +A +S + +GGKV++
Sbjct: 217 VWAWGGNYSGQLGDGTLDSRSTP--VRVSGLTGIVALAGGGSHSVAASS--TTLGGKVWA 272
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG+G V +L P V + +++G +HS + ++ GD
Sbjct: 273 WGDNTYGQLGNGGDVSSLLPLEVPGLT----QVVALASGTSHSLALRGDDSVWAWGDNAQ 328
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
Q PV+VS + +ACG SLV D N G+G+ GQLG
Sbjct: 329 AQTAQTGTSVQRVPVRVSGV--SDAQALACGNAFSLVGRGD---NVTLGWGANGSGQLGN 383
Query: 216 SKDRIRSVS--LPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWGR------GFNST 266
+R++ +P +T G A GD L A+G ++ WG G +
Sbjct: 384 GSSSVRALPGRVPSLTAGAS-------LAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTL 436
Query: 267 SDVNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P L S+L+ +A + H L L DG V G + +G L D RP
Sbjct: 437 VSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGDNAYGQLGDTS--GGRRPSPA 494
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ V+ +IAAG HS + + + TWG +GQLG G T
Sbjct: 495 QVPGVAG-----ATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT 537
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 161/390 (41%), Gaps = 81/390 (20%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG TDGQLG G + Q ++ L+ V+ +A G H LAL I G V++
Sbjct: 119 VWTWGTNTDGQLGDGVSQRSVPAQ---VAGLTGVTAIAAGNLHSLAL------INGAVWA 169
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG G P V + I+AG HS + G ++ G
Sbjct: 170 WGNNTTGQLGDGSSTSRSTPAKVAGLT----EVVAIAAGDFHSLALKRDGTVWAWGGNYS 225
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S S+PV+VS + +A G HS+ LG +V+ +G GQLG
Sbjct: 226 GQLGDGTLDSRSTPVRVSGLT--GIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGN 283
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW---------------- 259
D + S+ LP GL ++V +++ S AL + ++ W
Sbjct: 284 GGD-VSSL-LPLEVPGL--TQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQ 339
Query: 260 ------------------------GRGFN----------------STSDVNCPQSLPSSL 279
GRG N S+S P +PS
Sbjct: 340 RVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVPSLT 399
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ + A G +HV + DG V G + +G L D VS RP V L S L V+
Sbjct: 400 AGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVS--RPAPVRLS--STLTSVRA- 454
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++A + HS + + + WG +GQLG
Sbjct: 455 -LSASSYHSLALRSDGTVWAWGDNAYGQLG 483
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 162/405 (40%), Gaps = 78/405 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG---- 90
KVW+WG T GQLG G L P L + L+ V LA G +H LAL SV
Sbjct: 269 KVWAWGDNTYGQLGNGGDVSSLLP--LEVPGLTQVVALASGTSHSLALRGDDSVWAWGDN 326
Query: 91 ------------------------------GKVFS-----------WGRGSSGQLGHGEM 109
G FS WG SGQLG+G
Sbjct: 327 AQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSS 386
Query: 110 -VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
V AL + + G ++AG +H G ++ GD T+GQLG G S +
Sbjct: 387 SVRALPGRVPSLTAG-----ASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPA 441
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK--DRIRSVSLP 226
PV++SS + +V ++ HSL L D V+ +G GQLG + R +P
Sbjct: 442 PVRLSSTLT-SVRALSASSYHSLALRSD---GTVWAWGDNAYGQLGDTSGGRRPSPAQVP 497
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD-VNCPQSLPSSL 279
V I+A S AL ++G ++TWG G +T P +P
Sbjct: 498 GVAGATE------IAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLA 551
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ A G H L L G+V G + +G L D S P +VS L +
Sbjct: 552 VITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVP-----GRVSGLP-AGIQ 605
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
I AG +S + + ++ TWG +GQLG G T + P V+L
Sbjct: 606 AIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSL 650
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 155/356 (43%), Gaps = 38/356 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA GQLG G +P + L+ V+ +A G H +AL G V++
Sbjct: 69 VWAWGANAQGQLGEGSTLQHSTPT--QVVGLTGVTAVAAGNTHSMALREE-----GTVWT 121
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G ++ P V G +T I+AG HS +G ++ G+ T
Sbjct: 122 WGTNTDGQLGDGVSQRSV-PAQVAGLTG----VTAIAAGNLHS-LALINGAVWAWGNNTT 175
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S S+P KV+ V IA G HSL L +D V+ +G GQLG
Sbjct: 176 GQLGDGSSTSRSTPAKVAGLT--EVVAIAAGDFHSLALKRD---GTVWAWGGNYSGQLG- 229
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE---GHLYTWGRG----FNSTSD 268
+ S S P GL IV ++ G S A S+ G ++ WG + D
Sbjct: 230 -DGTLDSRSTPVRVSGL--TGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGD 286
Query: 269 VNC--PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
V+ P +P A G +H L L GD V G + + + +S + + V
Sbjct: 287 VSSLLPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNAQAQTA--QTGTSVQRVPVR 344
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ VS+ +A G S V + + WG GQLG G++ + P V
Sbjct: 345 VSGVSDAQ-----ALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRV 395
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 144/353 (40%), Gaps = 36/353 (10%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WGA GQLG G P + SL++ + LA G HV + G V++WG
Sbjct: 373 WGANGSGQLGNGSSSVRALPG--RVPSLTAGASLAAGDHHVFLRQAD-----GSVWAWGD 425
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
+ GQLG G +V P PV ++ +SA HS + G ++ GD +GQL
Sbjct: 426 NTYGQLGDGTLVS--RPAPVRLSS-TLTSVRALSASSYHSLALRSDGTVWAWGDNAYGQL 482
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G SP +V +IA G HSL L D V+ +G GQLG
Sbjct: 483 GDTSGGRRPSPAQVPGVAGAT--EIAAGTYHSLALRSD---GTVWTWGDNSYGQLGAGAT 537
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
R P V GL I ++A S AL + G ++ WG G ST+ N P
Sbjct: 538 P-RGPRAPAVVPGL--AVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVP 594
Query: 273 ---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
LP+ + A G ++ + L DG V G + +G L D + P V+L
Sbjct: 595 GRVSGLPAGIQAIVA--GPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPA 652
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ ++ H+ + + WG GQLG G + P+ V
Sbjct: 653 T-------LVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPRRV 698
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 159/374 (42%), Gaps = 68/374 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG + GQLG G SP + LA G HVLA++S G VFS
Sbjct: 723 VWAWGDNSLGQLGNG--ATSASPVPVQAVGYPRTVPLASGAQHVLAVSSD-----GSVFS 775
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G S GQLG+ P+ +T + I ++AG S +S G ++ GD
Sbjct: 776 FGSNSRGQLGYEGSATQTSPRWLTGPE----CIEAVAAGALFSLALSCDGGVWAWGDNGS 831
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + ++P +V + V IA G H+L + D V+ +G+ GQLG
Sbjct: 832 GQLGDGAVTARTAPARVPGLAH--VVAIAAGSDHALAVRAD---GTVWAWGANGSGQLGD 886
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-RGFNSTSD-VNCPQ 273
R+V + QV +++V ++ S A+ A+G ++ WG G D +
Sbjct: 887 GTTTSRAVPM-QVK---ELVDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSR 942
Query: 274 SLP---SSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA-LE 328
+LP S+LS QA A G H L L G V G + G L D S TRP+ V+ L
Sbjct: 943 TLPVFVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLS 1002
Query: 329 KVSNL---------------------------DGV--------------KVIQIAAGAEH 347
V L DG + ++AGA+H
Sbjct: 1003 GVQGLVAGASFSLALTPGKVWSWGNNSAGQLGDGTLNSRSQPGAGPTLSSFVALSAGAQH 1062
Query: 348 SAVVTENRAIMTWG 361
+ V+ + + ++WG
Sbjct: 1063 TVVLRSDDSFLSWG 1076
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 119/273 (43%), Gaps = 30/273 (10%)
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
P G Y ++AG NHS +V+ +G ++ G GQLG G HS+P +V
Sbjct: 41 APAISVQGRPY---RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGL 97
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
V +A G HS+ L ++ V+ +G+ GQLG D + S+P GL
Sbjct: 98 T--GVTAVAAGNTHSMALREE---GTVWTWGTNTDGQLG---DGVSQRSVPAQVAGL--T 147
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN 289
+ I+A S AL G ++ WG G S++ + P + A G
Sbjct: 148 GVTAIAAGNLHSLAL-INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDF 206
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS- 348
H L L DG V GG++ G L D S + P+ +VS L G ++ +A G HS
Sbjct: 207 HSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPV-----RVSGLTG--IVALAGGGSHSV 259
Query: 349 AVVTENRAIMTWGWGE--HGQLGLGNTCDQIHP 379
A + W WG+ +GQLG G + P
Sbjct: 260 AASSTTLGGKVWAWGDNTYGQLGNGGDVSSLLP 292
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 147/342 (42%), Gaps = 42/342 (12%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
LA G H L +T G V++WG + GQLG G + P V G +T +
Sbjct: 53 LAAGLNHSLYVTP-----AGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTG----VTAV 103
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG HS + + G ++T G T GQLG G S P +V+ V IA G HSL
Sbjct: 104 AAGNTHSMALREEGTVWTWGTNTDGQLGDG-VSQRSVPAQVAGLT--GVTAIAAGNLHSL 160
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L+ V+ +G+ GQLG RS P GL E+V I+A S AL
Sbjct: 161 ALINGA----VWAWGNNTTGQLGDGSSTSRST--PAKVAGL--TEVVAIAAGDFHSLALK 212
Query: 252 AEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD---GEVLM 302
+G ++ WG ++ + + P + A G +H + + G+V
Sbjct: 213 RDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWA 272
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + +G L + VSS PL +V L +V+ +A+G HS + + ++ W W
Sbjct: 273 WGDNTYGQLGNGGDVSSLLPL-----EVPGL--TQVVALASGTSHSLALRGDDSV--WAW 323
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
G++ Q T + V + D Q + CG+ F+
Sbjct: 324 GDNAQAQTAQTGTSVQRVPVRVSGV---SDAQ-ALACGNAFS 361
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 4 PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
P+ T G A+ + A+ + E VW+WGA GQLG G P + +
Sbjct: 945 PVFVSTLSGVQAIASGAQHSLALAEGG----VVWAWGANGSGQLGDGTTTSRTRP--VQV 998
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
S LS V L G + LALT GKV+SWG S+GQLG G +
Sbjct: 999 SGLSGVQGLVAGASFSLALTP------GKVWSWGNNSAGQLGDGTL 1038
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 154/356 (43%), Gaps = 35/356 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG G D + + L+ ++ LA G H LAL + G V+
Sbjct: 530 SVWTWGSNAYGQLGDGTAIDRATAA--QVPGLTDITALAAGNHHSLALRND-----GTVW 582
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G + P V+ R + AG HS V +G ++ G+
Sbjct: 583 VWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRA----VEAGPAHSVAVHLNGTVWVWGNND 638
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S + PV+VS V +A G+ HSL L D ++ +G GQLG
Sbjct: 639 FGQLGDGTVTSRAMPVQVSGLTG--VTAVAVGVYHSLALRND---GTLWAWGYNNVGQLG 693
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
I+S P GL ++ ++A S AL +G ++ WG G +T+
Sbjct: 694 NGTSGIQST--PAQVPGL--TGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTP 749
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P +P + G + + L + V G G L D T P+
Sbjct: 750 RSTPTQVPGLTNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV----- 804
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+VS L V +AAG H+ + +R + WG + GQ+G G I P VN+
Sbjct: 805 QVSGL--TDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTAS--IMPAPVNV 856
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 158/369 (42%), Gaps = 54/369 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D +P + + L+SV +A AH LAL S G V++
Sbjct: 164 VWAWGFNGSGQLGNGTATDRATP--VQVPGLTSVMAVAASEAHSLALRSD-----GTVWA 216
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--------HSGFVSDSGCL 147
WG GQLG G P V G +T ++AG N HS + G +
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLAG----VTALAAGGNGTTVAISAHSLALRSDGTV 272
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ GD + GQLG G ++PV+V + V +A G HSL L D V+ +G+
Sbjct: 273 WAWGDNSAGQLGDGTTTERATPVQVLGLTS--VTALAAGAFHSLALRDD---GTVWAWGN 327
Query: 208 GKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISA---------NGDRSAALSAEGHL 256
GQLG + R V +P +T ++ ++A GD S AL ++G +
Sbjct: 328 NSSGQLGDGTTTARPTPVQVPGLT------SVIAVAAGGGDDSLGMRGDHSLALKSDGTV 381
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN------HVLVLTGDGEVLMLGGSHHGM 310
+ WG + P + + + S+ G H +VL DG V G + G
Sbjct: 382 WAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L + +P+ +VS L + +A G HS V + I WG GQLG+
Sbjct: 442 LGEGVTPVRAKPM-----QVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI 494
Query: 371 GNTCDQIHP 379
G T + P
Sbjct: 495 GITATREIP 503
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 155/354 (43%), Gaps = 33/354 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G P + + L+S+S LA G +H LAL G V++
Sbjct: 481 IWAWGDNRRGQLGIGITATREIP--VQATGLASISALAAGDSHSLALRG-----NGSVWT 533
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G +D V IT ++AG +HS + + G ++ G F
Sbjct: 534 WGSNAYGQLGDGTAIDRATAAQVPGL----TDITALAAGNHHSLALRNDGTVWVWGSNDF 589
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S +PV+VS + + G HS+ + L V+ +G+ GQLG
Sbjct: 590 GQLGDGTVTSRKTPVQVSGL--SAMRAVEAGPAHSVAV---HLNGTVWVWGNNDFGQLG- 643
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDV- 269
+ S ++P GL + V + S AL +G L+ WG N TS +
Sbjct: 644 -DGTVTSRAMPVQVSGLTGVTAVAVGVY--HSLALRNDGTLWAWGYNNVGQLGNGTSGIQ 700
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P +P A G H L L DG V G + G L D + P V
Sbjct: 701 STPAQVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQV--PG 758
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++N VI + AGA ++ + R++ WG GQLG G + P V+
Sbjct: 759 LTN-----VIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVS 807
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 160/367 (43%), Gaps = 56/367 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--------AHVLALTSPSS 87
VW+WG GQLG G +P + + L+ V+ LA GG AH LAL S
Sbjct: 214 VWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAISAHSLALRSD-- 269
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V++WG S+GQLG G + P V ++T ++AG HS + D G +
Sbjct: 270 ---GTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSLALRDDGTV 322
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC-------GMR--HSLVLLKDCL 198
+ G+ + GQLG G + +PV+V +V +A GMR HSL L D
Sbjct: 323 WAWGNNSSGQLGDGTTTARPTPVQVPGLT--SVIAVAAGGGDDSLGMRGDHSLALKSD-- 378
Query: 199 GNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGH 255
V+ +G Q G+ R V + ++T G + GD A L ++G
Sbjct: 379 -GTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVA-------GDLHAVVLKSDGT 430
Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
++ WG G T P + + + A G H + + DG + G + G
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRG 490
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L +++TR + V ++++ +AAG HS + N ++ TWG +GQLG
Sbjct: 491 QLG--IGITATREIPVQATGLASIS-----ALAAGDSHSLALRGNGSVWTWGSNAYGQLG 543
Query: 370 LGNTCDQ 376
G D+
Sbjct: 544 DGTAIDR 550
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 26/298 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG+ GQLG G + +P + +S LS++ + G AH +A+ + G V+
Sbjct: 581 VWVWGSNDFGQLGDGTVTSRKTP--VQVSGLSAMRAVEAGPAHSVAVH-----LNGTVWV 633
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G + P V+ G +T ++ G HS + + G L+ G
Sbjct: 634 WGNNDFGQLGDGTVTSRAMPVQVSGLTG----VTAVAVGVYHSLALRNDGTLWAWGYNNV 689
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G S+P +V V +A G HSL L D V+G+G+ GQLG
Sbjct: 690 GQLGNGTSGIQSTPAQVPGLTG--VIALAAGNGHSLALRTD---GTVWGWGANSFGQLGD 744
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
RS P GL ++ + ++A + AL +E ++ WG G + +
Sbjct: 745 GTTTPRST--PTQVPGLTNV--IALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQK 800
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P + + A G H L L D V GG+ G + D P++V+
Sbjct: 801 TTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSF 858
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 134/335 (40%), Gaps = 48/335 (14%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
++ G H LAL G V++WG SGQLG+G D P V ++ +
Sbjct: 148 VSAAGDHTLALRRD-----GTVWAWGFNGSGQLGNGTATDRATPVQVPGL----TSVMAV 198
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG----- 186
+A HS + G ++ GD +GQLG G ++PV+V V +A G
Sbjct: 199 AASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGL--AGVTALAAGGNGTT 256
Query: 187 ---MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
HSL L D V+ +G GQLG R+ P +GL + ++A
Sbjct: 257 VAISAHSLALRSD---GTVWAWGDNSAGQLGDGTTTERAT--PVQVLGL--TSVTALAAG 309
Query: 244 GDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG---------W 288
S AL +G ++ WG G +T+ P +P S A G
Sbjct: 310 AFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRG 369
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L L DG V G + D + T P+ +VS L G + AG H+
Sbjct: 370 DHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPV-----QVSELTGGTA--LVAGDLHA 422
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V+ + + WG GQLG G T + P V+
Sbjct: 423 VVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVS 457
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 154/356 (43%), Gaps = 35/356 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG G D + + L+ ++ LA G H LAL + G V+
Sbjct: 531 SVWTWGSNAYGQLGDGTAIDRATAA--QVPGLTDITALAAGNHHSLALRND-----GTVW 583
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG GQLG G + P V+ R + AG HS V +G ++ G+
Sbjct: 584 VWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRA----VEAGPAHSVAVHLNGTVWVWGNND 639
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S + PV+VS V +A G+ HSL L D ++ +G GQLG
Sbjct: 640 FGQLGDGTVTSRAMPVQVSGLTG--VTAVAVGVYHSLALRND---GTLWAWGYNNVGQLG 694
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
I+S P GL ++ ++A S AL +G ++ WG G +T+
Sbjct: 695 NGTSGIQST--PAQVPGL--TGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTP 750
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P +P + G + + L + V G G L D T P+
Sbjct: 751 RSTPTQVPGLTNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV----- 805
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+VS L V +AAG H+ + +R + WG + GQ+G G I P VN+
Sbjct: 806 QVSGL--TDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTAS--IMPAPVNV 857
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 158/369 (42%), Gaps = 54/369 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG GQLG G D +P + + L+SV +A AH LAL S G V++
Sbjct: 165 VWAWGFNGSGQLGNGTATDRATP--VQVPGLTSVMAVAASEAHSLALRSD-----GTVWA 217
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--------HSGFVSDSGCL 147
WG GQLG G P V G +T ++AG N HS + G +
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLAG----VTALAAGGNGTTVAISAHSLALRSDGTV 273
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ GD + GQLG G ++PV+V + V +A G HSL L D V+ +G+
Sbjct: 274 WAWGDNSAGQLGDGTTTERATPVQVLGLTS--VTALAAGAFHSLALRDD---GTVWAWGN 328
Query: 208 GKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISA---------NGDRSAALSAEGHL 256
GQLG + R V +P +T ++ ++A GD S AL ++G +
Sbjct: 329 NSSGQLGDGTTTARPTPVQVPGLT------SVIAVAAGGGDDSLGMRGDHSLALKSDGTV 382
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN------HVLVLTGDGEVLMLGGSHHGM 310
+ WG + P + + + S+ G H +VL DG V G + G
Sbjct: 383 WAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L + +P+ +VS L + +A G HS V + I WG GQLG+
Sbjct: 443 LGEGVTPVRAKPM-----QVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI 495
Query: 371 GNTCDQIHP 379
G T + P
Sbjct: 496 GITATREIP 504
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 155/354 (43%), Gaps = 33/354 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G P + + L+S+S LA G +H LAL G V++
Sbjct: 482 IWAWGDNRRGQLGIGITATREIP--VQATGLASISALAAGDSHSLALRG-----NGSVWT 534
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG G +D V IT ++AG +HS + + G ++ G F
Sbjct: 535 WGSNAYGQLGDGTAIDRATAAQVPGL----TDITALAAGNHHSLALRNDGTVWVWGSNDF 590
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S +PV+VS + + G HS+ + L V+ +G+ GQLG
Sbjct: 591 GQLGDGTVTSRKTPVQVSGL--SAMRAVEAGPAHSVAV---HLNGTVWVWGNNDFGQLG- 644
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDV- 269
+ S ++P GL + V + S AL +G L+ WG N TS +
Sbjct: 645 -DGTVTSRAMPVQVSGLTGVTAVAVGVY--HSLALRNDGTLWAWGYNNVGQLGNGTSGIQ 701
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P +P A G H L L DG V G + G L D + P V
Sbjct: 702 STPAQVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQV--PG 759
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++N VI + AGA ++ + R++ WG GQLG G + P V+
Sbjct: 760 LTN-----VIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVS 808
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 160/367 (43%), Gaps = 56/367 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--------AHVLALTSPSS 87
VW+WG GQLG G +P + + L+ V+ LA GG AH LAL S
Sbjct: 215 VWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAISAHSLALRSD-- 270
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V++WG S+GQLG G + P V ++T ++AG HS + D G +
Sbjct: 271 ---GTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSLALRDDGTV 323
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC-------GMR--HSLVLLKDCL 198
+ G+ + GQLG G + +PV+V +V +A GMR HSL L D
Sbjct: 324 WAWGNNSSGQLGDGTTTARPTPVQVPGLT--SVIAVAAGGGDDSLGMRGDHSLALKSD-- 379
Query: 199 GNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGH 255
V+ +G Q G+ R V + ++T G + GD A L ++G
Sbjct: 380 -GTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVA-------GDLHAVVLKSDGT 431
Query: 256 LYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
++ WG G T P + + + A G H + + DG + G + G
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRG 491
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L +++TR + V ++++ +AAG HS + N ++ TWG +GQLG
Sbjct: 492 QLG--IGITATREIPVQATGLASIS-----ALAAGDSHSLALRGNGSVWTWGSNAYGQLG 544
Query: 370 LGNTCDQ 376
G D+
Sbjct: 545 DGTAIDR 551
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 26/298 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG+ GQLG G + +P + +S LS++ + G AH +A+ + G V+
Sbjct: 582 VWVWGSNDFGQLGDGTVTSRKTP--VQVSGLSAMRAVEAGPAHSVAVH-----LNGTVWV 634
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G + P V+ G +T ++ G HS + + G L+ G
Sbjct: 635 WGNNDFGQLGDGTVTSRAMPVQVSGLTG----VTAVAVGVYHSLALRNDGTLWAWGYNNV 690
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G S+P +V V +A G HSL L D V+G+G+ GQLG
Sbjct: 691 GQLGNGTSGIQSTPAQVPGLTG--VIALAAGNGHSLALRTD---GTVWGWGANSFGQLGD 745
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
RS P GL ++ + ++A + AL +E ++ WG G + +
Sbjct: 746 GTTTPRST--PTQVPGLTNV--IALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQK 801
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P + + A G H L L D V GG+ G + D P++V+
Sbjct: 802 TTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSF 859
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 134/335 (40%), Gaps = 48/335 (14%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
++ G H LAL G V++WG SGQLG+G D P V ++ +
Sbjct: 149 VSAAGDHTLALRRD-----GTVWAWGFNGSGQLGNGTATDRATPVQVPGL----TSVMAV 199
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG----- 186
+A HS + G ++ GD +GQLG G ++PV+V V +A G
Sbjct: 200 AASEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGL--AGVTALAAGGNGTT 257
Query: 187 ---MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
HSL L D V+ +G GQLG R+ P +GL + ++A
Sbjct: 258 VAISAHSLALRSD---GTVWAWGDNSAGQLGDGTTTERAT--PVQVLGL--TSVTALAAG 310
Query: 244 GDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG---------W 288
S AL +G ++ WG G +T+ P +P S A G
Sbjct: 311 AFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRG 370
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H L L DG V G + D + T P+ +VS L G + AG H+
Sbjct: 371 DHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPV-----QVSELTGGTA--LVAGDLHA 423
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V+ + + WG GQLG G T + P V+
Sbjct: 424 VVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVS 458
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 173/372 (46%), Gaps = 37/372 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT-----SPSSVI 89
++WSWG DG LG G D P L +L+ L GG+ V++++ S S I
Sbjct: 1448 RIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPL--------GGSTVVSISTGSGASRSQAI 1499
Query: 90 G--GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G++++WG +G LG G +D P V +T ++AG H+ + D L
Sbjct: 1500 DDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRL 1559
Query: 148 FTCGDGTFGQLGHGDYRSHSSP----VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+ G GQLG G + + P V + V + G HS++L D LG +++
Sbjct: 1560 WAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIIL--DDLG-RLW 1616
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
+G K G+LG ++ + + L+ +++ +SA + AL +G L+ WG
Sbjct: 1617 VWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLND 1676
Query: 262 ----GFNSTSDVNCP-----QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G ST+D + P SL + +A GWN V L G + G + G+L
Sbjct: 1677 SGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTV-ALDELGRLWAWGPNESGLLG 1735
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
D ++ RP+ V L + L+G KV+ ++AG+ + VV + + WG +GQLG G
Sbjct: 1736 DGTTINQHRPVQVDL---TPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGT 1792
Query: 373 TCDQIHPKVVNL 384
++ P V++
Sbjct: 1793 KTRRLKPVRVDM 1804
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+A G H L L + +++SWG G LG G D P T+ I
Sbjct: 1433 MAAGSLHSLILDNKD-----RIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSI 1487
Query: 132 S--AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV--SSFVNKNVHQIACGM 187
S +G + S + D G L+ G G LG G + PV V +S + V +A G
Sbjct: 1488 STGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGR 1547
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIE-IVGISANGD 245
H+LVL ++++ +G GQLG + LP QV D+E + G + G
Sbjct: 1548 YHNLVLDDQ---SRLWAWGHNGDGQLGDGTRTNVAYPLPIQV-----DLEPLAGSTVTG- 1598
Query: 246 RSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
W F H ++L G + + G
Sbjct: 1599 ------------VWAGDF--------------------------HSIILDDLGRLWVWGK 1620
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ +G L D TRP+ V L L+G KV+ ++AG H+ + E + WG +
Sbjct: 1621 NKYGELGDGTTTYQTRPVLVDLLP---LNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDS 1677
Query: 366 GQLGLGNTCDQIHPKVVNL 384
G+LG G+T D+ P V+L
Sbjct: 1678 GRLGDGSTTDRHRPVQVDL 1696
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 52/206 (25%)
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLH 233
V + +++A G HSL+L ++++ +G + G LG ++DR R V +G
Sbjct: 1426 VTGDKNRMAAGSLHSLILDNK---DRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGS 1482
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
+ + + RS A+ +G L+ WG F
Sbjct: 1483 TVVSISTGSGASRSQAIDDQGRLWAWGYNF------------------------------ 1512
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
G L D + RP+ V L ++L KV +AAG H+ V+ +
Sbjct: 1513 --------------AGALGDGTGIDRNRPVLVDL---ASLGSSKVTAVAAGRYHNLVLDD 1555
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ WG GQLG G + +P
Sbjct: 1556 QSRLWAWGHNGDGQLGDGTRTNVAYP 1581
>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
purpuratus]
Length = 946
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 154/351 (43%), Gaps = 53/351 (15%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P + L ++ + +A H+ AL + V V+SWG GS GQLGHG++ P
Sbjct: 68 PFKIELPTILKIRQVAVSRTHI-ALVTYERV----VYSWGEGSKGQLGHGDLDPRNVPTS 122
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
V G +IT ++ G S F SD+G + TCGDG+ G LGHGDY S S P + + ++
Sbjct: 123 VEALKGK--SITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLS 180
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD-IE 236
+V I+CG H + + D +++ +G GK G+LG+ + P + + L D +
Sbjct: 181 VDVTSISCGPEHVVGVGVD---GEIFAWGKGKDGRLGLGDE--EDFCEP-MEVTLRDPVF 234
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
I + D + L+ G L G S + LG NH
Sbjct: 235 IQEVKCGVDGTMFLTDMGCLLACG-------------------SNAYNKLGLNHRQGFL- 274
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
S M + E P +V L +V+ + G HSAVV E
Sbjct: 275 --------ASMKNMFTKTEVEGRKVPTAVKA-----LSKFRVLDMVVGPHHSAVVVEPGL 321
Query: 357 IMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ +G +HGQLG GNT + P +V + D+ + V CG +T A
Sbjct: 322 VYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLIS-----TVACGEDYTVA 367
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 30/264 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V + G G+ G LG G H P+L+ V+ ++CG HV+ + + G++F+
Sbjct: 150 VMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVTSISCGPEHVVGVG-----VDGEIFA 204
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G G+LG G+ D P VT D I + G + + F++D GCL CG +
Sbjct: 205 WGKGKDGRLGLGDEEDFCEPMEVTLRDP--VFIQEVKCGVDGTMFLTDMGCLLACGSNAY 262
Query: 156 GQLG----------------HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
+LG + P V + V + G HS V+++ L
Sbjct: 263 NKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVVEPGL- 321
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
VY FG + GQLG + R P + D I ++ D + A + + LY W
Sbjct: 322 --VYMFGKNQHGQLGFGNTKPREA--PAQVQTMADKLISTVACGEDYTVAGAMDNFLYLW 377
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQ 283
G+G+ ++ N S SSL SQ
Sbjct: 378 GKGWLTSDPGN--DSTQSSLELSQ 399
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G DG+LG G D P + L + + CG + LT ++
Sbjct: 201 EIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVDGTMFLTDMGCLLACGSN 260
Query: 95 SWGR-GSSGQLGHGEMVDALYPK--------PVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++ + G + + G + ++ K P ++ + + G +HS V + G
Sbjct: 261 AYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVVEPG 320
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
++ G GQLG G+ + +P +V + +K + +ACG +++ + N +Y +
Sbjct: 321 LVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLISTVACGEDYTVA---GAMDNFLYLW 377
Query: 206 GSG 208
G G
Sbjct: 378 GKG 380
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 154/337 (45%), Gaps = 44/337 (13%)
Query: 93 VFSWGRGSSGQLGHG--------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
V +WG G GQLG G +VDAL P + + + G +S + D
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEP----------FNVRSVVGGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ S+P V S N + Q A G H L + D G + Y
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAV--DDQG-RAY 113
Query: 204 GFGSGKRGQLG--VSKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+G + GQ G SKD R + +P+ + + ++A G S L+ EG++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREGYV 171
Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+TWG+ + ++ P + + A+G H L L DG + G + +G L
Sbjct: 172 WTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-- 229
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT- 373
T+P S + V LD + ++ IAAG HS +T + WG GEHG+LG G+
Sbjct: 230 --TGDTQPRSYPI-PVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286
Query: 374 -CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL D ++V CG + A++R
Sbjct: 287 KSSKMLPQKVNL---LPGEDI-IQVSCGGTHSVALTR 319
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG G LG E +P L+ + + A G H LA+ G+
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQ-----GRA 112
Query: 94 FSWGRGSSGQLGH-------GEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
++WG GQ G G V D + PK + T+ ++AG HS ++
Sbjct: 113 YAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA----QQLTVRQVAAGGTHSVVLTRE 168
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++T G GD + S PV+V +NV IA G H+L L +D ++
Sbjct: 169 GYVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKED---GTLWA 219
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
+G+ + GQLG + RS +P GL D+ +V I+A G S AL+ EG +Y WGRG
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEH 277
Query: 264 -------NSTSDVNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
N S PQ LP Q + G H + LT DG + G HG L
Sbjct: 278 GRLGFGDNDKSSKMLPQKVNLLPGE-DIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336
Query: 314 PERVSSTRPLSVAL 327
+V++ +PL + +
Sbjct: 337 GRKVTTGQPLELPI 350
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 156/359 (43%), Gaps = 39/359 (10%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ +++ +V + G + LA+ GK+F+WG
Sbjct: 9 AWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICD-----DGKLFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V I + G H V D G + G +G
Sbjct: 64 WNQRGTLGHPPETKTESTPSLVKSL--ANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSHS-SPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWTWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
Q D I+ +S+P GL ++ ++ + A + AL +G L+ WG G T
Sbjct: 176 --QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGT 230
Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
D P+S P L+ A G H LT +GEV G HG L + S+
Sbjct: 231 GDTQ-PRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ L +KV+ L G +IQ++ G HS +T + I ++G G+HG+LG G P
Sbjct: 290 KMLP---QKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLGTG P + L L+ V +A GG H ALT+ G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNE-----GEVY 270
Query: 95 SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGRG G+LG G+ + P+ V G I +S G HS ++ G +F+ G
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGE--DIIQVSCGGTHSVALTRDGRIFSFGR 328
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN----------------VHQIACGMRHSLVLLK 195
G G+LG+G + P+++ + +ACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 181/396 (45%), Gaps = 50/396 (12%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WGA T G+ +D LSP+LL +++ V ++ G H +T G+VF WG
Sbjct: 263 WGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTR-----QGEVFCWGN 317
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--DGTFG 156
G+SG+LG +D +PK V + + ++ + + V++SG L+ G GT
Sbjct: 318 GNSGKLGLKVNIDIDHPKRVESLED--VAVRSVACSDHQTCAVTESGELYLWGIDGGTIE 375
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
Q G S V S ++ +ACG H+ ++ Q++ +GS G LG
Sbjct: 376 QSGSQFLTRKISDVLGGSL---SIFSVACGAWHTAMVTS---SGQLFTYGSRTFGVLG-- 427
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFN 264
+ SV+ P+ L ++++ +S +AA+ + G L+TWG G
Sbjct: 428 HGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGDGDK 487
Query: 265 ST---SDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+D N + +P+ ++ F + + GW + L+ G V +G S HG L P
Sbjct: 488 GRLGHAD-NKRKLVPTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSIHGQLGCPR 546
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ + ++V L NL V IA+G+ H AV+T + TWG G +GQLGLG+ D
Sbjct: 547 --AKDKSINVVL---GNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGDVRD 601
Query: 376 QIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ P +V LGD + CG T AI H
Sbjct: 602 RNSPVLVEPLGDRLVE-----SIACGLNLTAAICLH 632
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPS-------S 87
+++++G+ T G LG G L P+ + V ++CG H A+ + +
Sbjct: 414 QLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAIDRKFYNA 473
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
GK+F+WG G G+LGH + L P VT H + +S GW + +S SG +
Sbjct: 474 KSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFI--KVSCGWTLTVALSVSGTV 531
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GQLG + S V + + + V IA G H VL GN VY +G
Sbjct: 532 YTMGSSIHGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTS--FGN-VYTWGK 588
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G GQLG+ R R+ + +G +E + N + L E L
Sbjct: 589 GTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISL 637
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 151/342 (44%), Gaps = 38/342 (11%)
Query: 51 RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV 110
RLH + S L V+ +A GGAH ALTS G V WGR GQLG G
Sbjct: 57 RLHTS------SFSPLQGVTAIAAGGAHTCALTSS-----GGVMCWGRNGFGQLGDGTTT 105
Query: 111 DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
D P V+ G +T I+AG+ H+ + SG + GD GQLG G S+PV
Sbjct: 106 DRSTPVAVS---GLTSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPV 162
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQV 228
VS + V IA G H+ V +G GQLG + DR S P
Sbjct: 163 AVSGLAS-GVTAIAAGDDHTCARTSS---GGVMCWGDNWSGQLGDGTTTDR----STPVA 214
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
GL + I+A G + AL + G ++ WG G +T+D + P ++ S
Sbjct: 215 VSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGV 273
Query: 283 QA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A A G H T G V+ G + G L D + + P VA+ +++ V I
Sbjct: 274 TAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTP--VAVSGLAS----GVTAI 327
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
AAG H+ +T + + WG+ GQLG G T D+ P V+
Sbjct: 328 AAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVS 369
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 158/356 (44%), Gaps = 31/356 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G D +P + +S L+S V+ +A GG H A TS G V
Sbjct: 241 VWCWGDNWSGQLGDGTTTDRSTP--VAVSGLASGVTAIAAGGFHTCARTSS-----GGVM 293
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG SGQLG G P V+ G +T I+AG +H+ ++ SG ++ G
Sbjct: 294 CWGANWSGQLGDGTTTARSTPVAVS---GLASGVTAIAAGDSHTCALTSSGGVWCWGYNF 350
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FGQLG G S+PV VS V IA G H+ L+ V +G K GQLG
Sbjct: 351 FGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGDFHTCALMSS---GGVRCWGRNKDGQLG 406
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
RS P GL + I+A D + A ++ G + WG G +T+D
Sbjct: 407 DGTTTTRST--PVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 463
Query: 269 VNCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P ++ S A A G +H L G V G + G L D P++V
Sbjct: 464 RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAV-- 521
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L +V IA+G H+ +T + +M WG GQLG G T + P V+
Sbjct: 522 ---SGLP-SEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVS 573
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 155/343 (45%), Gaps = 35/343 (10%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG G D +P + +S L S V+ +A GG+H AL S G V+ WG
Sbjct: 448 WGDNWSGQLGDGTTTDRSTP--VAVSGLGSGVTAIAAGGSHTCALMSS-----GGVWCWG 500
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
R SSGQLG G D P V+ G +T I++G H+ ++ SG + G GQ
Sbjct: 501 RNSSGQLGDGTTTDRGTPVAVS---GLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQ 557
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G + S+PV VS V IA G H+ L V+ +G+ GQLG
Sbjct: 558 LGDGTTTARSTPVAVSGL-PSGVMAIAAGDLHTCALTSS---GGVWCWGANSSGQLGDGT 613
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
RS P GL + I+A + AL++ G ++ WG G S +D +
Sbjct: 614 TTARST--PVAVSGLPS-GVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSST 670
Query: 272 P---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P LPS ++ A G H TG G V + +G L D S+ P++V+
Sbjct: 671 PVAVSGLPSGVT--AIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVS-G 727
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
VS V IAAG H+ T + +M WG GQLG G
Sbjct: 728 LVSG-----VTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDG 765
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 160/357 (44%), Gaps = 39/357 (10%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WGA GQLG G +P + +S L+S V+ +A G +H ALTS G V+ WG
Sbjct: 295 WGANWSGQLGDGTTTARSTP--VAVSGLASGVTAIAAGDSHTCALTSS-----GGVWCWG 347
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG G D P V+ G +T I+AG H+ + SG + G GQ
Sbjct: 348 YNFFGQLGDGTTTDRSTPVAVS---GLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQ 404
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
LG G + S+PV VS V+ V IA G H+ V +G GQLG
Sbjct: 405 LGDGTTTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSS---GGVMCWGDNWSGQLGDGT 460
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ DR S P GL + I+A G + AL + G ++ WGR G +T+D
Sbjct: 461 TTDR----STPVAVSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDR 515
Query: 270 NCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P LPS ++ A G H LT G V+ G + G L D + + P++V
Sbjct: 516 GTPVAVSGLPSEVT--AIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAV- 572
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L V+ IAAG H+ +T + + WG GQLG G T + P V+
Sbjct: 573 ----SGLP-SGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVS 624
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 158/361 (43%), Gaps = 41/361 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG GQLG G D +P + +S L S V+ +A G H AL S G V
Sbjct: 343 VWCWGYNFFGQLGDGTTTDRSTP--VAVSGLGSGVTAIAAGDFHTCALMSS-----GGVR 395
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGR GQLG G P V+ G +T I+AG +H+ + SG + GD
Sbjct: 396 CWGRNKDGQLGDGTTTTRSTPVAVS---GLVSGVTAIAAGDDHTCARTSSGGVMCWGDNW 452
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S+PV VS V IA G H+ L+ V+ +G GQLG
Sbjct: 453 SGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSS---GGVWCWGRNSSGQLG 508
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+ DR P GL E+ I++ G + AL++ G + WG G +T
Sbjct: 509 DGTTTDR----GTPVAVSGLPS-EVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTT 563
Query: 267 SDVNCP---QSLPSS-LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + P LPS ++ + L H LT G V G + G L D + + P
Sbjct: 564 TARSTPVAVSGLPSGVMAIAAGDL---HTCALTSSGGVWCWGANSSGQLGDGTTTARSTP 620
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++V S L V IAAG+ H+ +T + + WG GQLG G+ D P V
Sbjct: 621 VAV-----SGLP-SGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAV 674
Query: 383 N 383
+
Sbjct: 675 S 675
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 157/353 (44%), Gaps = 31/353 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG G D +P + +S L+S V+ +A G H A TS G V WG
Sbjct: 142 WGDNWSGQLGDGTTTDRSTP--VAVSGLASGVTAIAAGDDHTCARTSS-----GGVMCWG 194
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG G D P V+ G +T I+AG +H+ + SG ++ GD GQ
Sbjct: 195 DNWSGQLGDGTTTDRSTPVAVS---GLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQ 251
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G S+PV VS + V IA G H+ V +G+ GQLG
Sbjct: 252 LGDGTTTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTSS---GGVMCWGANWSGQLGDGT 307
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNC 271
RS P GL + I+A + AL++ G ++ WG F +T+D +
Sbjct: 308 TTARST--PVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRST 364
Query: 272 PQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P ++ S A A G H L G V G + G L D + + P++V+ V
Sbjct: 365 PVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVS-GLV 423
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S V IAAG +H+ T + +M WG GQLG G T D+ P V+
Sbjct: 424 SG-----VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVS 471
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 158/355 (44%), Gaps = 35/355 (9%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG G D +P + +S L S V+ +A GG+H AL S G V+ WG
Sbjct: 193 WGDNWSGQLGDGTTTDRSTP--VAVSGLGSGVTAIAAGGSHTCALMSS-----GGVWCWG 245
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG G D P V+ G +T I+AG H+ + SG + G GQ
Sbjct: 246 DNWSGQLGDGTTTDRSTPVAVS---GLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQ 302
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--V 215
LG G + S+PV VS + V IA G H+ L V+ +G GQLG
Sbjct: 303 LGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSS---GGVWCWGYNFFGQLGDGT 358
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ DR S P GL + I+A + AL + G + WGR G +T+
Sbjct: 359 TTDR----STPVAVSGLGS-GVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTR 413
Query: 270 NCPQSLPSSLSFSQA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ P ++ +S A A G +H T G V+ G + G L D + P++V
Sbjct: 414 STPVAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAV--- 470
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L G V IAAG H+ + + + WG GQLG G T D+ P V+
Sbjct: 471 --SGL-GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVS 522
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 157/355 (44%), Gaps = 35/355 (9%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG G D +P + +S L+S V+ +A G AH AL S G V WG
Sbjct: 91 WGRNGFGQLGDGTTTDRSTP--VAVSGLTSGVTAIAAGYAHTCALMSS-----GGVMCWG 143
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG G D P V+ G +T I+AG +H+ + SG + GD GQ
Sbjct: 144 DNWSGQLGDGTTTDRSTPVAVS---GLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQ 200
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GV 215
LG G S+PV VS V IA G H+ L+ V+ +G GQL G
Sbjct: 201 LGDGTTTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSS---GGVWCWGDNWSGQLGDGT 256
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST--SDVNCPQ 273
+ DR V++ + G + I+A G + A ++ G + WG ++ +
Sbjct: 257 TTDRSTPVAVSGLASG-----VTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTAR 311
Query: 274 SLPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
S P ++S + A G +H LT G V G + G L D + P++
Sbjct: 312 STPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVA---- 367
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L G V IAAG H+ + + + WG + GQLG G T + P V+
Sbjct: 368 -VSGL-GSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVS 420
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 154/354 (43%), Gaps = 33/354 (9%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG DGQLG G +P ++ +S V+ +A G H A TS G V WG
Sbjct: 397 WGRNKDGQLGDGTTTTRSTPVAVS-GLVSGVTAIAAGDDHTCARTSS-----GGVMCWGD 450
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
SGQLG G D P V+ G +T I+AG +H+ + SG ++ G + GQL
Sbjct: 451 NWSGQLGDGTTTDRSTPVAVS---GLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQL 507
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G G +PV VS ++ V IA G H+ L V +G+ GQLG
Sbjct: 508 GDGTTTDRGTPVAVSGLPSE-VTAIASGGVHTCALTSS---GGVMCWGANWSGQLGDGTT 563
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
RS P GL ++ I+A + AL++ G ++ WG G +T+ + P
Sbjct: 564 TARST--PVAVSGLPS-GVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTP 620
Query: 273 ---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
LPS ++ A G H LT G V G + G L D S+ P++V
Sbjct: 621 VAVSGLPSGVT--AIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAV---- 674
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L V IAAG H+ T + + W +GQLG G+ D P V+
Sbjct: 675 -SGLP-SGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVS 726
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL-SSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WGA + GQLG G +P + +S L S V+ +A G H ALTS G V+
Sbjct: 598 VWCWGANSSGQLGDGTTTARSTP--VAVSGLPSGVTAIAAGSFHTCALTSS-----GGVW 650
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG SGQLG G D+ P V+ G +T I+AG H+ + SG ++
Sbjct: 651 CWGANWSGQLGDGSYTDSSTPVAVS---GLPSGVTAIAAGRFHTCARTGSGGVWCWASNR 707
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLG G Y S+PV VS V+ V IA G+ H+ V +G+ GQLG
Sbjct: 708 YGQLGDGSYTDSSTPVAVSGLVS-GVTAIAAGVVHTCARTSS---GGVMCWGANSSGQLG 763
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 162/387 (41%), Gaps = 65/387 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHD--------ELSPQLLNLSSLSSVSMLACGGAHVLALTSPS 86
KV WG G G+LG HD L P L+N LS +ACGGAH A+
Sbjct: 8 KVACWGNGDYGRLG----HDCAKSLAVPSLVPALINQKFLS----VACGGAHTAAV---- 55
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ G VF+WG GQLGH + +P F ++ G +H+ F+++S
Sbjct: 56 -AVDGSVFTWGLNDHGQLGHYTHQEFSMQEPQEVF--LPEAAVQVAMGHSHTLFLTESSS 112
Query: 147 LFTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
++ G GQLG P +V V + IA G +HSL + D +++ +
Sbjct: 113 VWAVGSNMHGQLGLRRRGGQEWVPRRVQDLVGTKIIGIAAGAQHSLAVSAD---GELFTW 169
Query: 206 GSGKRGQLGVSKDRIRSV---SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G RG LG + + S P++ L I + + S + A G Y WG
Sbjct: 170 GGDTRGCLGHGRSSFAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWGPY 229
Query: 263 F------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML----S 312
+ ++ N P+ L + Q ALG H++ LT G V G S +G+L S
Sbjct: 230 LRQSPLTKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLGSS 289
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG--------- 363
DP P L + V + Q+AAG +HSA VT + ++TWGWG
Sbjct: 290 DPPS-----PFQPTL-----IPDVSLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGSESGL 339
Query: 364 ------EHGQLGLGNTCDQIHPKVVNL 384
GQLG N D P N+
Sbjct: 340 FPDQTSAGGQLGHDNEFDYWKPTPGNV 366
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 34/300 (11%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKV WG G G+LGH P V ++ ++ G H+ V+ G +FT
Sbjct: 7 GKVACWGNGDYGRLGHDCAKSLAVPSLVPALINQKFL--SVACGGAHTAAVAVDGSVFTW 64
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH ++ S F+ + Q+A G H+L L + + V+ GS
Sbjct: 65 GLNDHGQLGHYTHQEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTES---SSVWAVGSNMH 121
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RG----- 262
GQLG+ + R +P+ L +I+GI+A S A+SA+G L+TWG RG
Sbjct: 122 GQLGLRR-RGGQEWVPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGHG 180
Query: 263 ---FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
F +T D + P+ + + AA G + + +G G P
Sbjct: 181 RSSFAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWG---------PYLR 231
Query: 318 SSTRPLSVALEKVSN---LDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
S PL+ A + + L GV+ V Q+A G H +T + T+G E+G LGLG++
Sbjct: 232 QS--PLTKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLGSS 289
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L PQL+ L+S + V + A G H LAL + G+VFSWG G G+LGHG+ V
Sbjct: 185 DTLGPQLVQGLASRNIVKVAAHSDGHHYLALAA-----TGEVFSWGCGDGGRLGHGDTVP 239
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 240 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 299
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 356
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++IV + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 357 EKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 416
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D R++ +P + LD ++ I
Sbjct: 417 VDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPQP-----SALPGLDTKHIVGI 471
Query: 342 AAGAEHS 348
A G S
Sbjct: 472 ACGPAQS 478
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ V G + I+AG
Sbjct: 2266 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRG--IEVVDIAAG 2318
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L++ G G +G+LGHGD P V + V IACG +L
Sbjct: 2319 GAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 2378
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 2379 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 2433
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 2434 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 2455
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 2456 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 2504
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 2505 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 2536
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T + G ++
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACIT-----VAGDLY 2332
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 2333 SWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2392
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 2393 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 2449
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 2450 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 2493
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 155/360 (43%), Gaps = 60/360 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H +ALT +
Sbjct: 1202 KVYACGEATNGRLGLG-ISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALT-----VD 1255
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 1256 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 1313
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 1314 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 1370
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------ 262
G+LG + ++PQ L+ + I S AL+ G ++TWGRG
Sbjct: 1371 DFGKLG--RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELR 1428
Query: 263 --------------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG---------- 298
+ C LP S +GW V + G
Sbjct: 1429 PDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGE 1488
Query: 299 ------EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
EV G + HG + + +P V L+G K+ ++A G+ HS T
Sbjct: 1489 RRERQLEVYAWGDNDHGQQGNGTTTVNRKP-----TLVQGLEGQKITRVACGSSHSVAWT 1543
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS------VSMLACGGAHVLALTSPSSV 88
+V+SWG G G+LG G P+++ S+LS V +ACG + A+T+
Sbjct: 220 EVFSWGCGDGGRLGHGDTVPLEEPKMI--SALSGKQAGKHVVHIACGSTYSAAITAE--- 274
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 275 --GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 332
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ ++ CG + S+ L KD QVY +G G
Sbjct: 333 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD---GQVYSWGKG 389
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL ++V ++A AL+ + +++WG
Sbjct: 390 DNQRLGHGTE--EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 2173 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 2228
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 2229 GYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2288
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP V +L G++V+ IAAG HSA +T + +WG G +G+LG
Sbjct: 2289 KLGHGNRSPCDRP-----RVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLG 2343
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 2344 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 2372
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 46/274 (16%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY--GFGSGKRGQ 212
+G +G Y + P++ N V QIAC + L+L ++ +VY + S G
Sbjct: 133 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN---GRVYVQAYNSDTLG- 188
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFN 264
PQ+ GL IV ++A+ D AL+A G +++WG G
Sbjct: 189 -------------PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG 235
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ + S+LS QA A G + +T +GE+ G ++G L
Sbjct: 236 DTVPLEEPKMI-SALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 294
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KVI ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 295 DQTIPM-----LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDG 349
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 350 CKTPKLI---EKLQDLDI-VKVRCGSQFSIALTK 379
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 2228
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + V ++A G +H L L + +VY +G
Sbjct: 2229 GYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSE---GEVYSWGEA 2285
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
+ G+LG P+V L IE+V I+A G SA ++ G LY+WG+ G
Sbjct: 2286 EDGKLGHGNR--SPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLG 2343
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ D P+ + + + + G L LT D V G +G L
Sbjct: 2344 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2403
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 2404 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 2458
Query: 379 PKVVN 383
P+ V
Sbjct: 2459 PRQVQ 2463
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 29/298 (9%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++ I KVF WG QLG + P + ++ G V+ G
Sbjct: 1144 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTVEG 1201
Query: 146 CLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQV 202
++ CG+ T G+LG G + P ++++ N V ++A G RH++ L D +V
Sbjct: 1202 KVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVD---GKV 1258
Query: 203 YGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ +G G G+LG S+ + P++ L I I+ SAA+++ G LYTWG
Sbjct: 1259 FSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL 1315
Query: 262 GF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHGM 310
G ++T+ + P+ + L Q A G L LT +G V G G
Sbjct: 1316 GEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 1374
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
L P + + L+G V QI GA+ S +T++ + TWG G+ G+L
Sbjct: 1375 LGRGGSEGCNVP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 1149 TKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYAC 1206
Query: 260 GRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHH 308
G N S+ V P+ + S+ + A+ G H + LT DG+V G
Sbjct: 1207 GEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1266
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G+L
Sbjct: 1267 GKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 1321
Query: 369 GLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
G G+ Q+ PK+V LG ++V CGS
Sbjct: 1322 GHGDNTTQLKPKMVKVLLGHRV------IQVACGS 1350
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 29/258 (11%)
Query: 168 SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
S +KV SF NV Q+A G + L + +VY G G+LG+ +V
Sbjct: 1168 SKIKVPSFSETLSALNVVQVAGGSKS---LFAVTVEGKVYACGEATNGRLGLGISS-GTV 1223
Query: 224 SLPQVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQSL 275
LP+ L + ++ V + + G + AL+ +G +++WG G + S +NC P+ +
Sbjct: 1224 PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 1283
Query: 276 PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + A G +H +T GE+ G +G L + + +P + V L
Sbjct: 1284 EALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKP-----KMVKVL 1338
Query: 334 DGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
G +VIQ+A G+ + +T+ + +WG G+ G+LG G + P+ + E N
Sbjct: 1339 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNI----ERLNG 1394
Query: 392 DTQLEVFCGSGFTYAISR 409
++ CG+ F+ A+++
Sbjct: 1395 QGVCQIECGAQFSLALTK 1412
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 2488 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKL 2546
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 32/341 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS---PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+V S G+ QLG E+S P+ + + + CG H +ALT G
Sbjct: 71 RVLSCGSNDHDQLG-----QEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTE-----AG 120
Query: 92 KVFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+V+ WG S GQLG+GE ++ L P+ V +T+ I+ G NH + ++G L+
Sbjct: 121 QVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAP--FTVVQIACGSNHCLALLNNGALYAW 178
Query: 151 GDGTFGQLGHGDY-RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
GD GQLG G PV+V++ + + QIACG HS+VL K + ++ +GS +
Sbjct: 179 GDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGV---IFVWGSNR 235
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG+S ++ R + P + L + I+A G SAAL+A G ++T+G F + +V
Sbjct: 236 FGQLGLSDNKDR--AFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEV 293
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
SL + S Q+AL L + E +G L + P+ K
Sbjct: 294 RI--SLRGTESNPQSALARK--LFSLIEREFCRHSYGSYGQLGHGSKNDQLTPM-----K 344
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENR-AIMTWGWGEHGQLG 369
+ L G + QIA G H+ + T+G G +GQLG
Sbjct: 345 IQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 24/278 (8%)
Query: 96 WGRGSSGQLGHGEMVDAL--YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+G +SG+LG G + D + P+ + +G R + I+ G +H+ ++ G + +CG
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIR--VRQIATGAHHTLVLTSHGRVLSCGSN 78
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
QLG S + P V++ + Q+ CG +HS+ L + QVY +GS +GQL
Sbjct: 79 DHDQLGQE--VSTTKPEPVTALQCLRIVQVCCGQQHSMALTE---AGQVYMWGSNSKGQL 133
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSDVN 270
G + + +S P+ L +V I+ + AL G LY WG N V
Sbjct: 134 GNGEGQESRLS-PRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVG 192
Query: 271 CPQSLPSS------LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
PQ +P L SQ A G NH +VL+ G + + G + G L + P
Sbjct: 193 EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFP-- 250
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
L K VK IAAG HSA +T + + T+GW
Sbjct: 251 -TLLKTLRQQHVKF--IAAGGAHSAALTAHGGVFTFGW 285
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 108/251 (43%), Gaps = 36/251 (14%)
Query: 151 GDGTFGQLGHGDYRSH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ G+LG G H P + V QIA G H+LVL +V GS
Sbjct: 22 GNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSH---GRVLSCGSN 78
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
QLG S + P+ L + IV + S AL+ G +Y WG NS
Sbjct: 79 DHDQLGQEV----STTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGS--NSKGQ 132
Query: 269 VN---------CPQSLPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLS----- 312
+ P+ + + F+ Q A G NH L L +G + G + +G L
Sbjct: 133 LGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVG 192
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+P+RV +V+NL G+ + QIA GA HS V++++ I WG GQLGL +
Sbjct: 193 EPQRVPV---------EVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSD 243
Query: 373 TCDQIHPKVVN 383
D+ P ++
Sbjct: 244 NKDRAFPTLLK 254
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG + GQLG G+ +S PQ + S + ++ GG H AL+ + G V
Sbjct: 137 QVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALS-----VSGSV 191
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WGR GQLG G+ D P V + + T IS G +H+ ++ G +FT G G
Sbjct: 192 FGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKK--TTSISCGKDHTAILTKHGTVFTFGSG 249
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLGH R+ P V+ V +IACG H+LVL ++ N++Y FG + QL
Sbjct: 250 QFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQEN---NKIYSFGCNDQNQL 306
Query: 214 GVSKDRIRSVSLP 226
G S D SV LP
Sbjct: 307 GRSNDSHPSVPLP 319
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P + +F V Q+ACG RH++ L K+ QVY +G RGQLG+ K S+S PQ
Sbjct: 108 PRMLEAFCRIPVSQVACGSRHTVALTKE---GQVYTWGQNSRGQLGLGKKGC-SISSPQC 163
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFS 282
L + +V +SA GD S ALS G ++ WGR G + D P S+ SL+
Sbjct: 164 VRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSV-DSLNLK 222
Query: 283 QA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ + G +H +LT G V G G L + RP VA L G KV
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVA-----ELWGAKVT 277
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
+IA G H+ V+ EN I ++G + QLG N HP V
Sbjct: 278 RIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDS---HPSV 316
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 25/230 (10%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPK 116
P++L VS +ACG H +ALT G+V++WG+ S GQLG G+ ++ P+
Sbjct: 108 PRMLEAFCRIPVSQVACGSRHTVALTKE-----GQVYTWGQNSRGQLGLGKKGCSISSPQ 162
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
V G + +SAG +HS +S SG +F G GQLG GD + +P V S
Sbjct: 163 CVRSLSGM--PLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLN 220
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHD 234
K I+CG H+ +L K V+ FGSG+ GQLG S++ +R P++ L
Sbjct: 221 LKKTTSISCGKDHTAILTKH---GTVFTFGSGQFGQLGHNSSRNELR----PRLVAELWG 273
Query: 235 IEIVGISANGDRSAALSAEGHLYTW--------GRGFNSTSDVNCPQSLP 276
++ I+ + L +Y++ GR +S V P LP
Sbjct: 274 AKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPVLLP 323
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN----------STS 267
D +++ LP++ I + ++ + AL+ EG +YTWG+ S S
Sbjct: 100 DVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSIS 159
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
C +SL S + Q + G +H L+ G V G + G L + P SV
Sbjct: 160 SPQCVRSL-SGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSV-- 216
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+L+ K I+ G +H+A++T++ + T+G G+ GQLG ++ +++ P++V
Sbjct: 217 ---DSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLV 268
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
+I + D LS +G +Y + T + P+ L + + SQ A G H +
Sbjct: 76 KIEAVGCGDDEVILLSEKGSVYR----VDVTQALYLPRMLEAFCRIPVSQVACGSRHTVA 131
Query: 294 LTGDGEVLMLGGSHHGMLSDPER-VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
LT +G+V G + G L ++ S + P + V +L G+ ++Q++AG +HS ++
Sbjct: 132 LTKEGQVYTWGQNSRGQLGLGKKGCSISSP-----QCVRSLSGMPLVQVSAGGDHSFALS 186
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ ++ WG + GQLGLG++ D+ P V D + T + CG T +++H
Sbjct: 187 VSGSVFGWGRNDCGQLGLGDSQDRCTPTSV---DSLNLKKTT-SISCGKDHTAILTKH 240
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 135/292 (46%), Gaps = 32/292 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-----VSMLACG---GAHVLALTSPSS 87
V + G G+ G+LG G D L +L+++SS V+ LA H LA+T
Sbjct: 1852 VLACGEGSYGRLGQGNSDD-----LHSLTAISSIQGFVVTQLATSVGSDGHTLAVTE--- 1903
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+VFSWG G G+LGHG P+ + G + +S G+ HS V+ G L
Sbjct: 1904 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VIQLSCGFKHSAVVTADGKL 1959
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G+G +G+LG G + P +V + + + +ACG+ H+L + D G V+ FG
Sbjct: 1960 FTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSAD--GTNVWAFGD 2017
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
G G+LG + LP L I ++ S ALS G ++TWG+
Sbjct: 2018 GDFGKLG--QGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQ 2075
Query: 264 -NSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
++ NC +SLS G H LVLT DG+V G + G L
Sbjct: 2076 PDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQL 2127
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V L+CG H +T+ GK+F
Sbjct: 1906 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTA-----DGKLF 1960
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC-LFTCGDG 153
++G G G+LG G + P V + H+ I +++ G NH+ VS G ++ GDG
Sbjct: 1961 TFGNGDYGRLGLGTTTNKKVPTRVVALESHQ--IGYVACGLNHTLCVSADGTNVWAFGDG 2018
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG--FGSGKRG 211
FG+LG G+ P K+ + + ++ACG + S+ L K YG F G+
Sbjct: 2019 DFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSK-------YGKVFTWGQER 2071
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------N 264
+G R S PQ L I + + + L+++G ++ WG +
Sbjct: 2072 LIGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGH 2131
Query: 265 STSDVNCPQSLP 276
+ S V PQ +P
Sbjct: 2132 TNSPVREPQLVP 2143
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 155/366 (42%), Gaps = 75/366 (20%)
Query: 81 ALTSPSS-VIGGK--VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
A+ P +IGGK F WG G +GQ+ G A P V F + I G N
Sbjct: 1788 AMQKPEDWLIGGKCEAFLWGSGRNGQMCEGGR-GAFVPVRVPSFSCSQ----QIVCGQNC 1842
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLL 194
+ V ++G + CG+G++G+LG G+ S +SS V Q+A + H+L +
Sbjct: 1843 TFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVT 1902
Query: 195 KDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ +V+ +G G G+LG + DR R P+ L E++ +S SA ++A+
Sbjct: 1903 E---SGEVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVIQLSCGFKHSAVVTAD 1956
Query: 254 GHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG-EVLMLG 304
G L+T+G G +T++ P + + S A G NH L ++ DG V G
Sbjct: 1957 GKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFG 2016
Query: 305 GSHHGMLSD--------PERVSSTR-----------PLSVALEK---------------- 329
G L P ++ + + SVAL K
Sbjct: 2017 DGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQP 2076
Query: 330 ------------VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
V++L G + + GAEH+ V+T + + WG GQLGLG+T +
Sbjct: 2077 DTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPV 2136
Query: 378 H-PKVV 382
P++V
Sbjct: 2137 REPQLV 2142
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 98/238 (41%), Gaps = 55/238 (23%)
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
F G G GQ+ G R PV+V SF QI CG + V+ + V G
Sbjct: 1804 FLWGSGRNGQMCEGG-RGAFVPVRVPSFSCS--QQIVCGQNCTFVVQNN---GTVLACGE 1857
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
G G+LG N D +L+A + +GF T
Sbjct: 1858 GSYGRLG--------------------------QGNSDDLHSLTAISSI----QGFVVTQ 1887
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
L+ S + G H L +T GEV G +G L RP
Sbjct: 1888 -----------LATSVGSDG--HTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRP----- 1929
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
++ L G +VIQ++ G +HSAVVT + + T+G G++G+LGLG T ++ P +VV L
Sbjct: 1930 RQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVAL 1987
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 40/317 (12%)
Query: 88 VIGGKVFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
V + +WG G GQLG G +V+AL P Y++ + +G +S
Sbjct: 2 VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEP----------YSVRSVVSGSRNSL 51
Query: 140 FVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ D G +FT G G LGH + ++ + P +V + N + Q A G H L + D
Sbjct: 52 AICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAV--DDQ 109
Query: 199 GNQVYGFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
G + Y +G + GQ G KD + R + +P+ + + ++A G S L+
Sbjct: 110 G-RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVAAGGTHSVVLT 166
Query: 252 AEGHLYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
EGH++TWG+ + ++ P + + A+G H L L DG +L G + +G
Sbjct: 167 REGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYG 226
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L + ++ P+ V LD + ++ IAAG HS +T+ + WG GEHG+LG
Sbjct: 227 QLGTGDTQPTSHPVPV-----QGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 370 LGNT--CDQIHPKVVNL 384
LG+ ++ P+ VNL
Sbjct: 282 LGDNDKSSKMVPQKVNL 298
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 132/322 (40%), Gaps = 40/322 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ ++ SV + G + LA+ G +F+WG
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICD-----DGTMFTWG 63
Query: 98 RGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + T I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHQPETKTENIPSRVKALANVKITQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + PV+ + K V Q+A G HS+VL ++ V+ +
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE---GHVWTW---- 174
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
GQ D I+ +S+P GL ++ ++ + A + AL +G L WG G
Sbjct: 175 -GQPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALEEDGRLLAWGNNEYGQLGT 230
Query: 264 NSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM--LSDPERVS 318
T + P Q L AA GW H LT GEV G HG L D ++ S
Sbjct: 231 GDTQPTSHPVPVQGLDDLTLVDIAAGGW-HSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
Query: 319 STRPLSVALEKVSNLDGVKVIQ 340
P V L ++ D ++V++
Sbjct: 290 KMVPQKVNL--LAEEDIIQVLK 309
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNL------SSLSSVSMLACGGAHVLALTSPSS 87
+ ++WG GQ G L DE+ P ++ + +V +A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE-- 168
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V++WG+ G++ P V + R I+ G H+ + + G L
Sbjct: 169 ---GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNLALEEDGRL 217
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ +GQLG GD + S PV V + + IA G HS L +VYG+G
Sbjct: 218 LAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK---GEVYGWGR 274
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
G+ G+LG+ + S +PQ L + +I+ +
Sbjct: 275 GEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQV 307
>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
SB210]
Length = 4058
Score = 112 bits (280), Expect = 3e-22, Method: Composition-based stats.
Identities = 100/429 (23%), Positives = 175/429 (40%), Gaps = 103/429 (24%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL----NLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V +WG + G +GTG L + P+++ N S + ++CG H A++ +
Sbjct: 279 QVLAWGDNSYGNIGTGDLDYQEKPKIIQFDENKGDDSRIQFISCGANHCAAVS-----LS 333
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GK+++WG+G GQLGH +++ P V + + ++S G H+ +++ G ++
Sbjct: 334 GKLYTWGQGIQGQLGHQNVMNLSIPTAVKS-ELQEKKVVYVSCGGAHTVCLTNEGYAYSF 392
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+ GQLG GD + PVK+ N + + CGM ++ +L + +++ GS +
Sbjct: 393 GNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGMNNTFILTQ---VGKIFACGSNQH 449
Query: 211 GQLGV-----SKDR-----------IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+LG+ KD ++ V+ P L D+ I I+A+ + ALS +G
Sbjct: 450 NKLGLDQLFYQKDNFLNPIDLDINFLKGVNNPN----LKDVYIYQIAASPHFTYALSNQG 505
Query: 255 HLYTWGRGFN----------------STSDVNCPQSLPSSLSFSQA-------------- 284
L TWG N + S +P S F
Sbjct: 506 LLTTWGLQVNDCLGRSIDNYISEKMKNLSKNRTNMLIPCSTKFRNQIDSYTTYHKFYYPI 565
Query: 285 ---------------------ALGWNHVLVLTGDGEVLMLGGS---HHGMLSDPERV--- 317
LG H + LT GE+ + G + HG +S+ R
Sbjct: 566 QNSTIFRASEKDFISNDIVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQEYD 625
Query: 318 -SSTRPLSVALEKVSN------------LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
S+ + +++ +S + ++ IAAG E+ + R + WG
Sbjct: 626 ESNEKNINIIQNDISKETLPSVVSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNT 685
Query: 365 HGQLGLGNT 373
GQLG+G T
Sbjct: 686 DGQLGIGKT 694
Score = 92.4 bits (228), Expect = 3e-16, Method: Composition-based stats.
Identities = 94/352 (26%), Positives = 152/352 (43%), Gaps = 63/352 (17%)
Query: 58 PQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
P L+N + VS +ACG + +A+ + KV+ WG+ GQLG G + ++
Sbjct: 2715 PSLVNFFDIKENRRVSFIACGAEYCMAIENRR-----KVYGWGKNDQGQLGIGAISTIVH 2769
Query: 115 -PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKV 172
P V +G + ++ G H+ F+S+ GC+++CG T G+LG G + P+K+
Sbjct: 2770 KPTEVQGLEG--LLMKQVACGQVHTLFLSEEGCVYSCGSPTDGKLGLGKRDAIQLFPMKI 2827
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDC-----------LGNQ-----VYGFGSGKRGQLGV- 215
S + ++ACG HSL L +D L N+ VY +GS +LG
Sbjct: 2828 QSLA--KIDKVACGYTHSLALGEDVYVDEDFDDFNLLQNEFNKKVVYSWGSAYESKLGHG 2885
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GF-------- 263
K+ + + Q D I A G SAA+ E +L WG G+
Sbjct: 2886 EKENLFEPNRIQANFSFRD-----IFAGGHHSAAIDKEHNLIVWGPYIYFGYQKPEEKNK 2940
Query: 264 -NSTSDVN---CPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLG----GSHHGMLS 312
N DVN P P Q ALG + +VL ++ G +
Sbjct: 2941 KNYRQDVNEFIRPTLHPRQQLIQQVQKVALGDKYSIVLNNINQIFQWGVFDKTYENKCKE 3000
Query: 313 DPE--RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
+P R L + ++K+ N + QIA H+A++++N+ + TWG+
Sbjct: 3001 NPNLTRNQINESLMINIQKI-NAPSSTITQIAVANNHAALISKNQ-LYTWGY 3050
Score = 89.0 bits (219), Expect = 4e-15, Method: Composition-based stats.
Identities = 99/428 (23%), Positives = 168/428 (39%), Gaps = 93/428 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQ--LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++SWG G LG G + P LL V + C H A+ + GK
Sbjct: 2351 QLFSWGDNRSGNLGLGDTRYRIKPSLVLLEFGKPFQVRFIDCQAQHSAAIQ-----LDGK 2405
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG+G +GQLG + L P+ V + IT +S G H +++ G +T G
Sbjct: 2406 LYTWGQGLNGQLGINAQSNMLLPQRVGGILEQK-NITQVSCGVFHMACITNDGFCYTWGS 2464
Query: 153 GTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLG D + P V + + Q+ CG ++ ++ ++YG GS +
Sbjct: 2465 NTNGQLGLDKDLPQINYPCVVERLQSYFIIQVTCGYNNTFFFSQN---GRLYGCGSNQHN 2521
Query: 212 QLGV--------SKDRIRSVSLPQVTI------GLHDIEIVGISANGDRSAALSAEGHLY 257
++G+ SK+ V L + ++D+ I I ++ + ALS +G+L
Sbjct: 2522 KIGLDYNNYSKNSKNIYLPVELNNTFLKGVSFSKINDLYIYQIQSSFHSTFALSNKGYLT 2581
Query: 258 TW--------GRGFNSTS-------DVN--------CPQSLPSSL--------------- 279
+W GR ++ S D++ PQ +S
Sbjct: 2582 SWGLNVQGILGRKISTFSSQELCGLDIDYDDKVEGYIPQRYENSFIPNRIFVPIYNQQLY 2641
Query: 280 ----------SFSQAALGWNHVLVLTGDGEVLMLGG--SHHGMLSDPE------------ 315
F LG H + LT GE+ + G S + D +
Sbjct: 2642 RAKKRDFISSEFVDVQLGTFHSMALTNAGELYIWGSNESSQHAVDDLQIEQAYVDQAISK 2701
Query: 316 -RVSSTRPLSVALEKVSNLDGVK----VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
+++ ++ +L + N +K V IA GAE+ + R + WG + GQLG+
Sbjct: 2702 IKINVQTLVTSSLPSLVNFFDIKENRRVSFIACGAEYCMAIENRRKVYGWGKNDQGQLGI 2761
Query: 371 GNTCDQIH 378
G +H
Sbjct: 2762 GAISTIVH 2769
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 65 SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
S+ SV +ACG + + LT ++FSWG SG LG G+ + P V G
Sbjct: 2329 SMFSVIQIACGWSFCMILTRSH-----QLFSWGDNRSGNLGLGDTRYRIKPSLVLLEFGK 2383
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQI 183
+ + I HS + G L+T G G GQLG + P +V + KN+ Q+
Sbjct: 2384 PFQVRFIDCQAQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKNITQV 2443
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
+CG+ H + D Y +GS GQLG+ KD + ++ P V L I+ ++
Sbjct: 2444 SCGVFHMACITNDGF---CYTWGSNTNGQLGLDKD-LPQINYPCVVERLQSYFIIQVTCG 2499
Query: 244 GDRSAALSAEGHLYTWG 260
+ + S G LY G
Sbjct: 2500 YNNTFFFSQNGRLYGCG 2516
Score = 75.5 bits (184), Expect = 5e-11, Method: Composition-based stats.
Identities = 104/464 (22%), Positives = 185/464 (39%), Gaps = 111/464 (23%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
K+++WG G GQLG + + P + S L V ++CGGAH + LT+ G
Sbjct: 335 KLYTWGQGIQGQLGHQNVMNLSIPTAVK-SELQEKKVVYVSCGGAHTVCLTNE-----GY 388
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+S+G +GQLG G+ P + Y I ++ G N++ ++ G +F CG
Sbjct: 389 AYSFGNNKNGQLGLGDQEQRNVPVKIQKL--QNYFIVNVVCGMNNTFILTQVGKIFACGS 446
Query: 153 GTFGQLGHGD--YRSHS--SPVKVS-SFV----NKN-----VHQIACGMRHSLVL----- 193
+LG Y+ + +P+ + +F+ N N ++QIA + L
Sbjct: 447 NQHNKLGLDQLFYQKDNFLNPIDLDINFLKGVNNPNLKDVYIYQIAASPHFTYALSNQGL 506
Query: 194 -------LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE---------- 236
+ DCLG + + S K L SK+R + +P T + I+
Sbjct: 507 LTTWGLQVNDCLGRSIDNYISEKMKNL--SKNRTNML-IPCSTKFRNQIDSYTTYHKFYY 563
Query: 237 -------------------IVGISANGDRSAALSAEGHLYTWG---------------RG 262
IV I + AL+ G +Y WG +
Sbjct: 564 PIQNSTIFRASEKDFISNDIVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQE 623
Query: 263 FNSTSDVN--------CPQSLPSSLSF---------SQAALGWNHVLVLTGDGEVLMLGG 305
++ +++ N ++LPS +SF + A G+ + + + V G
Sbjct: 624 YDESNEKNINIIQNDISKETLPSVVSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGR 683
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ G L + T+ + + V L+G + IA G H+ +T+ + + G +
Sbjct: 684 NTDGQLG----IGKTQYYVESPQMVLGLEGNLMKAIACGENHTLFLTDTGQVYSCGSSKD 739
Query: 366 GQLGLGN-TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+LGLGN T Q+ P+++ N ++ CG + A++
Sbjct: 740 GKLGLGNRTNTQLQPQLIT------NLSKVEQISCGQSHSMALA 777
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---- 178
G + + I G N ++ + + GD ++G +G GD P + NK
Sbjct: 256 GRKTFVVQICCGLNFCLILTYNFQVLAWGDNSYGNIGTGDLDYQEKPKIIQFDENKGDDS 315
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEI 237
+ I+CG H + L ++Y +G G +GQLG + ++S+P V L + ++
Sbjct: 316 RIQFISCGANHCAAV---SLSGKLYTWGQGIQGQLG--HQNVMNLSIPTAVKSELQEKKV 370
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSF--SQAALGWN 289
V +S G + L+ EG+ Y++G G N P + ++ G N
Sbjct: 371 VYVSCGGAHTVCLTNEGYAYSFGNNKNGQLGLGDQEQRNVPVKIQKLQNYFIVNVVCGMN 430
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDP----ERVSSTRPLSVALEKVS-----NLDGVKVIQ 340
+ +LT G++ G + H L ++ + P+ + + + NL V + Q
Sbjct: 431 NTFILTQVGKIFACGSNQHNKLGLDQLFYQKDNFLNPIDLDINFLKGVNNPNLKDVYIYQ 490
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ-IHPKVVNLGDEFQNRDTQLEVFC 399
IAA + H N+ ++T WG LG + D I K+ NL +NR T + + C
Sbjct: 491 IAA-SPHFTYALSNQGLLT-TWGLQVNDCLGRSIDNYISEKMKNLS---KNR-TNMLIPC 544
Query: 400 GSGFTYAISRH 410
+ F I +
Sbjct: 545 STKFRNQIDSY 555
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 171 KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVT 229
++ F +V QIACG ++L + +Q++ +G + G LG+ R R SL +
Sbjct: 2324 QIKGFSMFSVIQIACGWSFCMILTRS---HQLFSWGDNRSGNLGLGDTRYRIKPSLVLLE 2380
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC------PQSLPSSL---S 280
G ++ I SAA+ +G LYTWG+G N +N PQ + L +
Sbjct: 2381 FG-KPFQVRFIDCQAQHSAAIQLDGKLYTWGQGLNGQLGINAQSNMLLPQRVGGILEQKN 2439
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVI 339
+Q + G H+ +T DG G + +G L D + P V L +I
Sbjct: 2440 ITQVSCGVFHMACITNDGFCYTWGSNTNGQLGLDKDLPQINYPCV-----VERLQSYFII 2494
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
Q+ G ++ ++N + G +H ++GL
Sbjct: 2495 QVTCGYNNTFFFSQNGRLYGCGSNQHNKIGL 2525
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG TDGQLG G+ + SPQ++ + + +ACG H L LT G+V+
Sbjct: 678 VYAWGRNTDGQLGIGKTQYYVESPQMVLGLEGNLMKAIACGENHTLFLTDT-----GQVY 732
Query: 95 SWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-------- 145
S G G+LG G + L P+ +T + IS G +HS ++
Sbjct: 733 SCGSSKDGKLGLGNRTNTQLQPQLITNLS----KVEQISCGQSHSMALAQDDFFKQDDDE 788
Query: 146 ----------CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
++T G+ +LGHGD + P K+ S N I+ G HS L
Sbjct: 789 EHARQINVKMVVYTWGNAWESKLGHGDRENLYEPTKIQS--NYLFKYISAGSHHSAALTT 846
Query: 196 D 196
D
Sbjct: 847 D 847
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 60 LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM---VDALYPK 116
N+ ++ +A G + +A+ + V ++WGR + GQLG G+ V++ P+
Sbjct: 650 FFNIKENRRITYIAAGYEYCMAIENKRLV-----YAWGRNTDGQLGIGKTQYYVES--PQ 702
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
V +G+ + I+ G NH+ F++D+G +++CG G+LG G+ + ++ + +
Sbjct: 703 MVLGLEGN--LMKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQLITNL 760
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQ---------------VYGFGSGKRGQLGVSKDRIR 221
+K V QI+CG HS+ L +D Q VY +G+ +LG DR
Sbjct: 761 SK-VEQISCGQSHSMALAQDDFFKQDDDEEHARQINVKMVVYTWGNAWESKLG-HGDR-- 816
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+L + T + ISA SAAL+ + +L WG
Sbjct: 817 -ENLYEPTKIQSNYLFKYISAGSHHSAALTTDDNLVVWG 854
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV----- 88
+V+S G+ DG+LG G R + +L PQL +++LS V ++CG +H +AL
Sbjct: 730 QVYSCGSSKDGKLGLGNRTNTQLQPQL--ITNLSKVEQISCGQSHSMALAQDDFFKQDDD 787
Query: 89 --------IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
+ V++WG +LGHG+ + P + Y +ISAG +HS
Sbjct: 788 EEHARQINVKMVVYTWGNAWESKLGHGDRENLYEPTKIQ----SNYLFKYISAGSHHSAA 843
Query: 141 VSDSGCLFTCGDGTFGQLGH 160
++ L G + GH
Sbjct: 844 LTTDDNLVVW--GPYKYFGH 861
Score = 47.8 bits (112), Expect = 0.012, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 269 VNCPQSLPSSLSFS-QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
V P+ + +F Q G N L+LT + +VL G + +G + + +P +
Sbjct: 248 VQLPKGIGGRKTFVVQICCGLNFCLILTYNFQVLAWGDNSYGNIGTGDLDYQEKPKIIQF 307
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
++ + D ++ I+ GA H A V+ + + TWG G GQLG N + P V E
Sbjct: 308 DE-NKGDDSRIQFISCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSIPTAVK--SE 364
Query: 388 FQNRDTQLEVFCGSGFTYAIS 408
Q + + V CG T ++
Sbjct: 365 LQEKKV-VYVSCGGAHTVCLT 384
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
V + ++ VIQIA G ++T + + +WG G LGLG+T +I P +V L
Sbjct: 2320 VEITQIKGFSMFSVIQIACGWSFCMILTRSHQLFSWGDNRSGNLGLGDTRYRIKPSLVLL 2379
Query: 385 --GDEFQNR 391
G FQ R
Sbjct: 2380 EFGKPFQVR 2388
Score = 41.2 bits (95), Expect = 0.85, Method: Composition-based stats.
Identities = 63/256 (24%), Positives = 98/256 (38%), Gaps = 62/256 (24%)
Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV----------- 223
F++ ++ I G+ H++ L ++Y +GS + Q G + IR
Sbjct: 578 FISNDIVDIELGVFHTMALTN---AGEIYVWGSNQMCQHGCISNIIRQEYDESNEKNINI 634
Query: 224 --------SLPQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGR------GFNS 265
+LP V + +I+ I I+A + A+ + +Y WGR G
Sbjct: 635 IQNDISKETLPSV-VSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGIGK 693
Query: 266 TSD-VNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
T V PQ L +L A G NH L LT G+V G S G L R ++
Sbjct: 694 TQYYVESPQMVLGLEGNL-MKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNT-- 750
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----------ENRA--------IMTWGWG 363
+ + ++NL KV QI+ G HS + E A + TWG
Sbjct: 751 --QLQPQLITNLS--KVEQISCGQSHSMALAQDDFFKQDDDEEHARQINVKMVVYTWGNA 806
Query: 364 EHGQLGLGNTCDQIHP 379
+LG G+ + P
Sbjct: 807 WESKLGHGDRENLYEP 822
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
W+WG+ GQLG G + P+ + + LS V +A G AH LA+ S G V+
Sbjct: 168 SAWAWGSNASGQLGEGTTSNR--PEPVQVQGLSGVVAVAAGSAHSLAVRSD-----GTVW 220
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G D L P V G + ++AG +HS V + G ++ G
Sbjct: 221 AWGANASGQLGDGTTTDRLVPVQVQGLSG----VVAVAAGHHHSLAVRNDGTVWGWGRND 276
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
QLG G R P +V V +A G HSL + D V+ GS GQLG
Sbjct: 277 SNQLGKGSMRLLV-PAQVQGL--SAVVAVAAGDTHSLAVGSD---GTVWAVGSNNNGQLG 330
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV----N 270
R V +P ++ +V ++AN S A+ ++G ++ WG +NST +
Sbjct: 331 DGTTTYRLVPVPVLS------GVVSVAANDYHSLAVRSDGTVWAWG--YNSTGQLGDGTT 382
Query: 271 CPQSLPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ +P +S S A G+ H L + DG G + +G L D ST L V
Sbjct: 383 TTRLVPVQVSGLSEVVSVVAGGY-HSLAVRSDGSAWDWGSNAYGQLGD----GSTTYLPV 437
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG---NTCDQIH 378
+ +V L GV + A+G+ HS + + + TWG+ GQLG G NT I
Sbjct: 438 PV-RVQQLSGVGAV--ASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIR 490
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 154/354 (43%), Gaps = 42/354 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ GQLG +P + + LS V +A G +HVLAL G V+
Sbjct: 68 TVWAWGSNASGQLGDETTISRSTP--VQVLGLSGVLFVAAGSSHVLALR-----YDGTVW 120
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG SSGQ G G + P G + ++AG NHS V G + G
Sbjct: 121 AWGSNSSGQRGDGTTNNRALPVQAQGLSG----VMAVAAGDNHSLAVRSDGSAWAWGSNA 176
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + PV+V V +A G HSL + D V+ +G+ GQLG
Sbjct: 177 SGQLGEGTTSNRPEPVQVQGL--SGVVAVAAGSAHSLAVRSD---GTVWAWGANASGQLG 231
Query: 215 --VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-- 270
+ DR+ +P GL + V ++A S A+ +G ++ WGR N ++ +
Sbjct: 232 DGTTTDRL----VPVQVQGLSGV--VAVAAGHHHSLAVRNDGTVWGWGR--NDSNQLGKG 283
Query: 271 -----CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + + A G H L + DG V +G +++G L D P+ V
Sbjct: 284 SMRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPV 343
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L GV + +AA HS V + + WG+ GQLG G T ++ P
Sbjct: 344 -------LSGV--VSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVP 388
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 151/346 (43%), Gaps = 36/346 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG+ + GQ G G ++ P + LS V +A G H LA+ S G +
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALP--VQAQGLSGVMAVAAGDNHSLAVRSD-----GSAW 170
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G + P V G + ++AG HS V G ++ G
Sbjct: 171 AWGSNASGQLGEGTTSNRPEPVQVQGLSG----VVAVAAGSAHSLAVRSDGTVWAWGANA 226
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G PV+V V +A G HSL + D V+G+G QLG
Sbjct: 227 SGQLGDGTTTDRLVPVQVQGL--SGVVAVAAGHHHSLAVRND---GTVWGWGRNDSNQLG 281
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSD 268
R+ +P GL +V ++A S A+ ++G ++ G N +T+
Sbjct: 282 KGSMRLL---VPAQVQGLS--AVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTY 336
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S + S AA + H L + DG V G + G L D + P+
Sbjct: 337 RLVPVPVLSGV-VSVAANDY-HSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPV----- 389
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+VS L +V+ + AG HS V + + WG +GQLG G+T
Sbjct: 390 QVSGLS--EVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTT 433
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 131/307 (42%), Gaps = 29/307 (9%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+A G +H LAL S G V++WG SSGQLG G + P PV + +
Sbjct: 1 MAAGSSHSLALRSD-----GTVWAWGANSSGQLGDGTTTYSPVPVPVQVQG--LSEVVAV 53
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
AG +HS V G ++ G GQLG S S+PV+V V +A G H L
Sbjct: 54 DAGSSHSLAVRSDGTVWAWGSNASGQLGDETTISRSTPVQVLGL--SGVLFVAAGSSHVL 111
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L D V+ +GS GQ G R +LP GL ++ ++A + S A+
Sbjct: 112 ALRYD---GTVWAWGSNSSGQRGDGTTNNR--ALPVQAQGLSG--VMAVAAGDNHSLAVR 164
Query: 252 AEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
++G + WG G +TS+ P + A G H L + DG V G
Sbjct: 165 SDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAWGA 224
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ G L D P+ +V L G V+ +AAG HS V + + WG +
Sbjct: 225 NASGQLGDGTTTDRLVPV-----QVQGLSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDS 277
Query: 366 GQLGLGN 372
QLG G+
Sbjct: 278 NQLGKGS 284
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 20/255 (7%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
++AG +HS + G ++ G + GQLG G PV V V + G HS
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L + D V+ +GS GQLG + S S P +GL + V +A AL
Sbjct: 61 LAVRSD---GTVWAWGSNASGQLG--DETTISRSTPVQVLGLSGVLFV--AAGSSHVLAL 113
Query: 251 SAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
+G ++ WG RG +T++ P A G NH L + DG G
Sbjct: 114 RYDGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDGSAWAWG 173
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+ G L E +S RP V ++ +S V+ +AAG+ HS V + + WG
Sbjct: 174 SNASGQLG--EGTTSNRPEPVQVQGLSG-----VVAVAAGSAHSLAVRSDGTVWAWGANA 226
Query: 365 HGQLGLGNTCDQIHP 379
GQLG G T D++ P
Sbjct: 227 SGQLGDGTTTDRLVP 241
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 29/330 (8%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
+ ++ G H LA+ S G +++WG SSGQLG+ ++++ P V+ DG T T
Sbjct: 52 TQVSAGINHSLAMGSD-----GNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDG--VTFT 104
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIACG 186
+SAG +HS V G + G T G+LG+G S P+ VS+ + Q+ G
Sbjct: 105 QVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAG 164
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL--HDIEIVGISANG 244
HSL + + +Y +G + GQLG SV L +V+ G + +SA
Sbjct: 165 GFHSLAVGSN---GDIYSWGYNRSGQLGDGTTLASSVPL-KVSAGAVPAGVTFSQVSAGD 220
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTG 296
S A+ + G Y WG G S S P S P+ +SF+Q + G H L +
Sbjct: 221 RHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGS 280
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG+ G + G L + SS P+ VS + G+ V Q++AGA+HS + +
Sbjct: 281 DGKAYAWGNNDSGQLGNATTTSSLAPV-----LVSPMGGLAVTQVSAGADHSLAIGADGN 335
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
WG +GQLG P +V D
Sbjct: 336 AYAWGLNVNGQLGNNTITTSTVPVMVTAPD 365
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 162/361 (44%), Gaps = 27/361 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WG + GQLG + + P L++ + + ++ G H LA+ S G +
Sbjct: 69 NIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSD-----GNAY 123
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WGR + G+LG+G + P V+ TI+ + AG HS V +G +++ G
Sbjct: 124 AWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYN 183
Query: 154 TFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GQLG G + S P+KVS+ Q++ G RHSL + + + Y +G +
Sbjct: 184 RSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSN---GKTYAWGEARG 240
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNS 265
GQLG+ I P + + +SA S A+ ++G Y WG N+
Sbjct: 241 GQLGIGS--ISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNA 298
Query: 266 TSDVNCPQSLPS---SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
T+ + L S L+ +Q + G +H L + DG G + +G L + +ST P
Sbjct: 299 TTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVP 358
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ V+ DGV +I AG HS + TWG GQLG G + + P +
Sbjct: 359 V-----MVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAI 413
Query: 383 N 383
+
Sbjct: 414 S 414
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K ++WG GQLG L+P L++ +V+ ++ G H LA+ + G +
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGAD-----GNAY 337
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +GQLG+ + + P VT DG T T I AG HS + +T G +
Sbjct: 338 AWGLNVNGQLGNNTITTSTVPVMVTAPDG--VTFTRIEAGGLHSLTAASDENTYTWGANS 395
Query: 155 FGQLGHGDYRSHSSPVKVSSF 175
FGQLG+G PV +S F
Sbjct: 396 FGQLGNGTSDGSLVPVAISRF 416
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 164/383 (42%), Gaps = 56/383 (14%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G G+LG P + LACGGAH L LT G+V++ G
Sbjct: 14 WGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEE-----GRVYASGL 68
Query: 99 GSSGQLG----HGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GQLG G ++ L P F THI+AG HS +S+ G ++
Sbjct: 69 NDWGQLGLPLSTGHSMEFLEVEGLPDEAKF--------THIAAGDFHSAAISEDGRVYMW 120
Query: 151 GDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G T GQLG G + V S + + +A G HSL L ++ +V +G+
Sbjct: 121 GRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEE---GEVLSWGTS 177
Query: 209 KRGQLG----------VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
G+LG S R S P++ G D+++ ++A SA L +G L+T
Sbjct: 178 LNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFT 237
Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
+G+ G D++ P+ +P + A G H ++ +G++ M G + +G L
Sbjct: 238 FGKGRECQLGLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLG 297
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG--------- 363
+ + L + +E L+ ++V Q+ G +H+ +T + + WGWG
Sbjct: 298 FGYKHQNATSLPMLVEGA--LESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVD 355
Query: 364 ---EHGQLGLGNTCDQIHPKVVN 383
GQLGLGN D + P V
Sbjct: 356 GLSSGGQLGLGNENDFLEPTQVK 378
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 125/277 (45%), Gaps = 26/277 (9%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+G +G+LG S P S + +ACG H+LVL ++ +VY G
Sbjct: 15 GNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEE---GRVYASGLNDW 71
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------G 262
GQLG+ S+ +V + + I+A SAA+S +G +Y WGR G
Sbjct: 72 GQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQGQLGLG 131
Query: 263 FNSTSDVNCPQSLPSSLSFS-QA-ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
V Q + S F QA ALG H L L+ +GEVL G S +G L E S+
Sbjct: 132 KRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSS 191
Query: 321 RPLSVALEK-------VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
S+ + V VKV ++AAG HSA + E ++ T+G G QLGLG
Sbjct: 192 SMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGD 251
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
D PK V + + E+ CG T AISR+
Sbjct: 252 RDISEPKRVPVIPPVE------EIACGGYHTGAISRN 282
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 23/241 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG T GQLG G+ + SL + LA G H LAL+ G+
Sbjct: 116 RVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEE-----GE 170
Query: 93 VFSWGRGSSGQLGHGE-----MVDALYPKPVTF----FDGHR-YTITHISAGWNHSGFVS 142
V SWG +G+LGHGE + +++ K + G R ++ ++AG HS +
Sbjct: 171 VLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLD 230
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+ G LFT G G QLG G R S P +V V V +IACG H+ + ++ Q+
Sbjct: 231 EQGSLFTFGKGRECQLGLGGDRDISEPKRVP--VIPPVEEIACGGYHTGAISRN---GQL 285
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR 261
Y +GS + G LG + SLP + G L + + + + AL+ +G ++ WG
Sbjct: 286 YMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGW 345
Query: 262 G 262
G
Sbjct: 346 G 346
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G G + QLG G D P+ + + + V +ACGG H A++ G+++
Sbjct: 235 LFTFGKGRECQLGLGGDRDISEPKRVPV--IPPVEEIACGGYHTGAISR-----NGQLYM 287
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDG--HRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG G LG G P+ +G +T + GW H+ ++ G +F G G
Sbjct: 288 WGSNEYGCLGFGYKHQNATSLPM-LVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWG 346
Query: 154 ------------TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
+ GQLG G+ P +V S N QI+CG HS +L++
Sbjct: 347 GSQGTHGVDGLSSGGQLGLGNENDFLEPTQVKS-KNMKAIQISCGFNHSGAILEE 400
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 45/380 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+LL + + V ++ G H +T G+VF WG GS G+LGH +D
Sbjct: 292 DSLLPKLLEPTVMLDVRNISLGRNHAALITK-----RGEVFCWGEGSRGKLGHKVDMDVS 346
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVK 171
P V DG + + ++ G + ++DSG LF G+ +G + R+ S P +
Sbjct: 347 SPTIVESLDG--FLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQ 404
Query: 172 VS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
+S ++ +ACG H+ + Q++ +G G G LG ++SVS P+
Sbjct: 405 ISGPLAGVSISNVACGDWHTAAVSS---SGQLFTYGDGTFGVLG--HGNLQSVSHPKEVE 459
Query: 231 GLHDIEIVGISANGDRSAAL-----------SAEGHLYTWGRG---------FNSTSDVN 270
L + + ++ +AA+ G L+TWG G
Sbjct: 460 SLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPT 519
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
C L F Q + G + LT G++ +G S HG L +P+ + S+A+ +
Sbjct: 520 CVAQLVEH-DFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQ----AKNKSIAIVE- 573
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
L V +I++G+ H A +T ++ TWG G +GQLGLGN D+ P +V + ++
Sbjct: 574 GKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLV---EALRD 630
Query: 391 RDTQLEVFCGSGFTYAISRH 410
R Q + CGS T AI H
Sbjct: 631 RQVQ-SIACGSNLTAAICLH 649
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G G+LG L +L P + ++CG +ALT GK++
Sbjct: 495 KLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALTRT-----GKIY 549
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ G GQLG+ + + K + +G + IS+G H ++ G ++T G
Sbjct: 550 TMGSSVHGQLGNPQAKN----KSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGK 605
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
GT GQLG G+ + P V + ++ V IACG
Sbjct: 606 GTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACG 639
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
V++WG GT+GQLG G + D P L+ V +ACG A+ S+
Sbjct: 600 VYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAICLHKSI 652
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 165/353 (46%), Gaps = 69/353 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++WG +GQLG G + + L ++L++ ++ +++CG H + L G++
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQ-----DGQI 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA-GWNHSGFVSDSGCLFTCGD 152
+S G GQ G + + + + + F+ R IT++S+ G NH+ ++D C++ GD
Sbjct: 56 YSCGSNDYGQTGR-QRNNKRFAR-IDAFESMR--ITNVSSNGANHNLAINDKNCIYAWGD 111
Query: 153 GTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQLG D + + +P ++ S V Q+ACG HSL ++ D V+ +GS +
Sbjct: 112 NSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVIND---GTVFSWGSNR 168
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLG+ + + SV P+ + L IV I+A G S A++ G L TWG+
Sbjct: 169 YGQLGIDSN-VSSVE-PKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKN------- 219
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
SF Q LG N G+LS P VSS R +A
Sbjct: 220 ----------SFGQLGLGTN------------------DGVLS-PTCVSSLRSQHIAYA- 249
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
A G +H+AV+T+ + T+G G GQLG + P++V
Sbjct: 250 ------------ACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQMV 290
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 125/254 (49%), Gaps = 24/254 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDE---LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++WG +DGQLG + + +P+ + S +V +ACG +H LA+ + G
Sbjct: 106 IYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVIND-----GT 160
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG GQLG V ++ PK + G + I I+AG HS +++SG L T G
Sbjct: 161 VFSWGSNRYGQLGIDSNVSSVEPKQILKLSG--FYIVQIAAGGAHSLAITNSGALLTWGK 218
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+FGQLG G SP VSS ++++ ACG H+ VL K+ V+ FG+G GQ
Sbjct: 219 NSFGQLGLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKE---GGVFTFGAGSSGQ 275
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL-YTWGRGFN------- 264
LG + + PQ+ + L I + I+ G A E L YT F+
Sbjct: 276 LG--HNSLSHHCSPQMVVDLMGIVVTQITC-GRFYALQQDEVSLDYTKKNFFDTPLYLST 332
Query: 265 STSDVNCPQSLPSS 278
ST D C ++L S
Sbjct: 333 STFDTLCRENLTSK 346
>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
Length = 388
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 34/340 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WGA ++ QLG G D SP + + +L SV ++ GGA A+ S G ++
Sbjct: 51 VWAWGANSNAQLGDGTKTDRYSP--IPVKNLDSVIGISAGGAASFAVRSD-----GTAWA 103
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G D L P V +++ + AG +HS V G ++ G T+
Sbjct: 104 WGSNLFGQLGDGTTYDRLTPVQVQGL----HSVVALEAGSSHSLAVKADGSVWAWGWNTY 159
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S S+PV+V + +V +A G HSL + D V+ +G+ GQLG
Sbjct: 160 GQLGDGTTDSRSTPVQVQAL--DSVVAVAAGSGHSLAVKAD---GSVWAWGANWSGQLG- 213
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSD 268
++P GL +V +SA S+AL ++G ++ WG + + S+
Sbjct: 214 -DGTYTESTVPVQVTGLG--SVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASN 270
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S + + G ++ L L DG V G + G L + SS+ P+
Sbjct: 271 SPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPV----- 325
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+V+ L V+ +AAG H V + WG +GQL
Sbjct: 326 QVTRLG--SVVSVAAGPLHGLAVQSGGTVWDWGNNTYGQL 363
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 127/302 (42%), Gaps = 26/302 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++WG S+ QLG G D P PV D ++ ISAG S V G +
Sbjct: 49 GTVWAWGANSNAQLGDGTKTDRYSPIPVKNLD----SVIGISAGGAASFAVRSDGTAWAW 104
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG G +PV+V +V + G HSL + D V+ +G
Sbjct: 105 GSNLFGQLGDGTTYDRLTPVQVQGL--HSVVALEAGSSHSLAVKAD---GSVWAWGWNTY 159
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ 264
GQLG RS V + D +V ++A S A+ A+G ++ WG ++
Sbjct: 160 GQLGDGTTDSRST---PVQVQALD-SVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDG 215
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ ++ P + S + G L DG V G + G L E +S P
Sbjct: 216 TYTESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGS-ETAASNSPSP 274
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVN 383
V + ++ I++G+++S + + + WG+ GQLG G T P +V
Sbjct: 275 VQVTGMA-----SAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPVQVTR 329
Query: 384 LG 385
LG
Sbjct: 330 LG 331
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 111/266 (41%), Gaps = 26/266 (9%)
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
AL D + + + G HS F+ G ++ G + QLG G SP+
Sbjct: 16 ALTANMAVAADRSKTPVEAAAGGTGHSLFLQKDGTVWAWGANSNAQLGDGTKTDRYSPIP 75
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVT 229
V + +V I+ G S + D + +GS GQL G + DR+ V +
Sbjct: 76 VKNL--DSVIGISAGGAASFAVRSD---GTAWAWGSNLFGQLGDGTTYDRLTPVQVQ--- 127
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQ 283
GLH +V + A S A+ A+G ++ WG G +T + P + + S
Sbjct: 128 -GLH--SVVALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDSVVA 184
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H L + DG V G + G L D ST P+ +V+ L V+ ++A
Sbjct: 185 VAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPV-----QVTGLG--SVVSVSA 237
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLG 369
G S+ + + + WG + GQLG
Sbjct: 238 GNTFSSALKSDGTVWAWGANDSGQLG 263
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V A G HSL L KD V+ +G+ QLG R +P + ++G
Sbjct: 32 VEAAAGGTGHSLFLQKD---GTVWAWGANSNAQLGDGTKTDRYSPIPVKNLD----SVIG 84
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
ISA G S A+ ++G + WG G +T D P + S G +H L
Sbjct: 85 ISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQGLHSVVALEAGSSHSLA 144
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+ DG V G + +G L D S + P+ +V LD V+ +AAG+ HS V
Sbjct: 145 VKADGSVWAWGWNTYGQLGDGTTDSRSTPV-----QVQALD--SVVAVAAGSGHSLAVKA 197
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLG 385
+ ++ WG GQLG G + P +V LG
Sbjct: 198 DGSVWAWGANWSGQLGDGTYTESTVPVQVTGLG 230
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 165/362 (45%), Gaps = 47/362 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG GQL E+ N SV ++ G H L L G +
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLK-----DGTL 55
Query: 94 FSWGRGSSGQLGHG------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
S G+ GQLG E + +L + TI +S G NHS + D G +
Sbjct: 56 LSCGQNPYGQLGRKGNNSRIEQISSLEAQ----------TIVDVSCGTNHSVAMCDEGNI 105
Query: 148 FTCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++ GDG+ GQLG G + S + +P +++ +N+ + QI+CG HS+ L +D +V+ +G
Sbjct: 106 YSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAED---GRVFSWG 162
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
K GQLG+ I + PQ+ L I +V ++A G ++ ALS G ++ WGR
Sbjct: 163 QNKCGQLGLGSQIINQAT-PQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQ 221
Query: 262 -GFNSTSDVNC--PQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
GF + + P ++ S L + + G H VL DG V G +G L
Sbjct: 222 LGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSG 281
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS--AVVTENRAIMTWGWGEHGQLGLGNTC 374
++ P + E+ S +V Q+A G H+ V T NR I+++G G Q G +
Sbjct: 282 NQTSVPQKI--EEYSR----QVSQVACGRYHTLLYVFTCNR-IVSFGKGSQRQQGNDESS 334
Query: 375 DQ 376
DQ
Sbjct: 335 DQ 336
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 15/197 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+SWG GQLG G ++ ++ +PQL+ SL + ++ GG+ AL+ + G
Sbjct: 157 RVFSWGQNKCGQLGLGSQIINQATPQLV--KSLKGIPLVQVTAGGSQTFALS-----MSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF+WGR ++GQLG KP + +IS G H+ ++ G ++T G
Sbjct: 210 TVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFG 269
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
D T+GQLG S P K+ + ++ V Q+ACG H+L+ + C N++ FG G +
Sbjct: 270 DDTYGQLGQQSGNQTSVPQKIEEY-SRQVSQVACGRYHTLLYVFTC--NRIVSFGKGSQR 326
Query: 212 QLG--VSKDRIRSVSLP 226
Q G S D+ + LP
Sbjct: 327 QQGNDESSDQAEASQLP 343
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 64/242 (26%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLVLLKDCLGNQVYG 204
++ GD FGQL + K + + K +V +++ G +HSL LLKD +
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKD---GTLLS 57
Query: 205 FGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G GQLG + RI +S L IV +S + S A+ EG++Y+W
Sbjct: 58 CGQNPYGQLGRKGNNSRIEQIS------SLEAQTIVDVSCGTNHSVAMCDEGNIYSW--- 108
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG-GSHHGMLSDPERVSSTR 321
GDG LG G P+R++
Sbjct: 109 ---------------------------------GDGSEGQLGTGKFSSKNFTPKRITG-- 133
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPK 380
L K+IQI+ G HS + E+ + +WG + GQLGLG+ +Q P+
Sbjct: 134 -----------LLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQ 182
Query: 381 VV 382
+V
Sbjct: 183 LV 184
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 145/340 (42%), Gaps = 37/340 (10%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG + GQLG G L+P + +S LS+ + LA G +H AL +V WGR
Sbjct: 500 WGRNSSGQLGDGTTERRLTP--VTVSGLSAATALAAGDSHTCALLDTR-----RVRCWGR 552
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
SSGQLG G D + P V+ G T ++AG +H+ + D+G + G + GQL
Sbjct: 553 NSSGQLGDGTRTDRVTPVAVSGLSG----ATALAAGNSHTCTLLDTGTVQCWGWNSSGQL 608
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VS 216
G G +P VS V +A G H+ L+ V +G GQLG
Sbjct: 609 GDGTRTDRVTPAAVSGL--SGVTALAAGANHTCALMDS---GTVQCWGRNSSGQLGDGTR 663
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
DR+ P GL + + AN + AL G + WGR G +T+D
Sbjct: 664 TDRV----TPAAVSGLSGVTALAAGAN--HTCALMDSGTVQCWGRNSSGQLGDGTTTDRV 717
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P ++ + G NH L G V G + G L D P++V
Sbjct: 718 TPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAV----- 772
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
S L G+ + AAG+EH+ V A WG G+LG+
Sbjct: 773 SGLSGITAL--AAGSEHTCAVLNTGAARCWGRNLFGRLGI 810
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG + GQLG G L+P + +S LS + LA G H AL + + WGR
Sbjct: 450 WGENSPGQLGDGTTERRLTP--VTVSGLSGATSLAAGDGHTCALMNVRTA-----QCWGR 502
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
SSGQLG G L P V+ T ++AG +H+ + D+ + G + GQL
Sbjct: 503 NSSGQLGDGTTERRLTPVTVSGLSA----ATALAAGDSHTCALLDTRRVRCWGRNSSGQL 558
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VS 216
G G +PV VS +A G H+ LL D Q +G+ S GQLG
Sbjct: 559 GDGTRTDRVTPVAVSGL--SGATALAAGNSHTCTLL-DTGTVQCWGWNS--SGQLGDGTR 613
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
DR+ P GL + + AN + AL G + WGR G + +D
Sbjct: 614 TDRV----TPAAVSGLSGVTALAAGAN--HTCALMDSGTVQCWGRNSSGQLGDGTRTDRV 667
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P ++ + A G NH L G V G + G L D P V
Sbjct: 668 TPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVTP-----AAV 722
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L GV + AGA H+ + + WG E GQLG G T D++ P V+
Sbjct: 723 SGLSGVTAL--VAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAVS 773
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 147/360 (40%), Gaps = 37/360 (10%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q V WG + GQLG G L+P +++S LS + LA GG H AL G
Sbjct: 343 QTETVQCWGLNSSGQLGDGTTERRLTP--VSVSGLSGSTALAAGGVHTCALLQT-----G 395
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V WGR GQLG G L P V+ G T ++AG H+ V + G
Sbjct: 396 TVQCWGRNEFGQLGDGTTERRLTPVVVSGLSG----ATALTAGDRHTCAVLQTRTAQCWG 451
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ + GQLG G +PV VS +A G H+ L+ +G G
Sbjct: 452 ENSPGQLGDGTTERRLTPVTVSGL--SGATSLAAGDGHTCALMNV---RTAQCWGRNSSG 506
Query: 212 QL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
QL G ++ R+ V++ ++ ++A + AL + WGR G
Sbjct: 507 QLGDGTTERRLTPVTVSGLS------AATALAAGDSHTCALLDTRRVRCWGRNSSGQLGD 560
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ +D P ++ + A G +H L G V G + G L D R P
Sbjct: 561 GTRTDRVTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDRVTP- 619
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L GV +AAGA H+ + ++ + WG GQLG G D++ P V+
Sbjct: 620 ----AAVSGLSGVTA--LAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTPAAVS 673
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 142/360 (39%), Gaps = 37/360 (10%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
Q V WG GQLG G L+P ++ S LS + L G H A+ +
Sbjct: 393 QTGTVQCWGRNEFGQLGDGTTERRLTPVVV--SGLSGATALTAGDRHTCAVLQTRTA--- 447
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG S GQLG G L P V+ G T ++AG H+ + + G
Sbjct: 448 --QCWGENSPGQLGDGTTERRLTPVTVSGLSG----ATSLAAGDGHTCALMNVRTAQCWG 501
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G +PV VS +A G H+ LL +V +G G
Sbjct: 502 RNSSGQLGDGTTERRLTPVTVSGL--SAATALAAGDSHTCALLDT---RRVRCWGRNSSG 556
Query: 212 QLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGF 263
QLG DR+ V++ ++ ++A + L G + WG G
Sbjct: 557 QLGDGTRTDRVTPVAVSGLS------GATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGD 610
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ +D P ++ + A G NH L G V G + G L D R P
Sbjct: 611 GTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTP- 669
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
VS L GV + AAGA H+ + ++ + WG GQLG G T D++ P V+
Sbjct: 670 ----AAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSSGQLGDGTTTDRVTPAAVS 723
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 146/355 (41%), Gaps = 35/355 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW WG GQLG G D P + +S LS V+ LA G H AL + G V
Sbjct: 97 VWCWGWNGSGQLGDGTTTDRAMP--VAVSGLSGVTALAAGRYHTCALLNT-----GTVQC 149
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SSGQLG + + + P V+ G + ++AG H+ + D+ + G+
Sbjct: 150 WGLNSSGQLGDWTITNRVTPVAVSGLSG----VIALAAGDRHTCALLDTRTVRCWGENEH 205
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV VS V +A G RH+ L V +G GQLG
Sbjct: 206 GQLGDGTTNDRWTPVAVSGL--SGVTALAAGGRHTCAALNT---GTVQCWGGNGAGQLG- 259
Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
D R+ L P GL ++A + + AL G + WG G +T
Sbjct: 260 --DGTRTSRLTPMAVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTER 315
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P ++ + A G H + V G + G L D P+SV
Sbjct: 316 RLTPVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSV--- 372
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
S L G + AAG H+ + + + WG E GQLG G T ++ P VV+
Sbjct: 373 --SGLSGSTAL--AAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVS 423
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 151/373 (40%), Gaps = 40/373 (10%)
Query: 19 NAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAH 78
+ +P + V W G++G+L T SP LS V LA G H
Sbjct: 33 DKRPVKLDRYLYPGVAHTWIDSTGSEGRLMTNPGKAPASPL-----PLSRVIALAAGRYH 87
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
AL + G V+ WG SGQLG G D P V+ G +T ++AG H+
Sbjct: 88 TCALLNT-----GTVWCWGWNGSGQLGDGTTTDRAMPVAVSGLSG----VTALAAGRYHT 138
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ ++G + G + GQLG + +PV VS V +A G RH+ LL
Sbjct: 139 CALLNTGTVQCWGLNSSGQLGDWTITNRVTPVAVSGL--SGVIALAAGDRHTCALLDT-- 194
Query: 199 GNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V +G + GQL G + DR V++ ++ + ++A G + A G +
Sbjct: 195 -RTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS------GVTALAAGGRHTCAALNTGTV 247
Query: 257 YTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
WG G + + P ++ + A G+ H L G V G + G
Sbjct: 248 QCWGGNGAGQLGDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVRCWGLNSSGQ 307
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L D P++ VS L GV +AAG H+ V + + WG GQLG
Sbjct: 308 LGDGTTERRLTPVA-----VSGLSGVTA--LAAGDFHTCAVLQTETVQCWGLNSSGQLGD 360
Query: 371 GNTCDQIHPKVVN 383
G T ++ P V+
Sbjct: 361 GTTERRLTPVSVS 373
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V WG + GQLG G D ++P + S LS V+ L G H AL P+ G V
Sbjct: 697 VQCWGRNSSGQLGDGTTTDRVTPAAV--SGLSGVTALVAGANHTCALM-PT----GTVQC 749
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+ GQLG G D L P V+ G IT ++AG H+ V ++G G F
Sbjct: 750 WGKNEFGQLGDGTTTDRLTPVAVSGLSG----ITALAAGSEHTCAVLNTGAARCWGRNLF 805
Query: 156 GQLG 159
G+LG
Sbjct: 806 GRLG 809
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 112 bits (279), Expect = 4e-22, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 142/329 (43%), Gaps = 58/329 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL----NLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
V+SWG G G LG G + ++P ++ N ++ +ACG HVL+L G
Sbjct: 273 VYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQ-----G 327
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+SWG G G+LGHG+ PK + +Y I I AG S +S LF G
Sbjct: 328 IVYSWGNGQGGRLGHGDETGENIPKEIIGL--RQYKILMIEAGEGSSAAISIKNELFIWG 385
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G G+LG G + PV + ++ V IA G HSL +L++ + +GS K G
Sbjct: 386 VGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRN---GKAMCWGSSKDG 442
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
+LG+ R+ + P+ + L ++ I+A S AL+ G +Y++G G++
Sbjct: 443 KLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDE 502
Query: 266 TS-DVNCPQSLPSSLSFS-------------------------------------QAALG 287
+V P+ + + F+ QA G
Sbjct: 503 IKGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCG 562
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+N + L DG++ + G + +G L +R
Sbjct: 563 FNSTVFLLNDGQMYVCGSNKYGQLGFSKR 591
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 149/323 (46%), Gaps = 43/323 (13%)
Query: 91 GKVFSWGRGSSGQLGHG----------EMVDALYP-KP-VTFFDGHRYTITHISAGWNHS 138
G VF+WG + G+LG + + L P KP + FD I +S G + +
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDA-SIIIIKVSCGNSFT 264
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN----KNVHQIACGMRHSLVLL 194
+S G +++ G G G LG G+ +P + N +N+ IACG H L L
Sbjct: 265 LALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLD 324
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+ VY +G+G+ G+LG + ++P+ IGL +I+ I A SAA+S +
Sbjct: 325 HQGI---VYSWGNGQGGRLGHGDET--GENIPKEIIGLRQYKILMIEAGEGSSAAISIKN 379
Query: 255 HLYTWGRGFN------STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
L+ WG G + T++V P L ALG NH L + +G+ + G S
Sbjct: 380 ELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSS 439
Query: 307 HHGMLSDPERVSS--TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
G L + T+P +++ LD K+ QIAAG HS +TEN I ++G +
Sbjct: 440 KDGKLGLETALDRNFTQP-----KELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSK 494
Query: 365 HGQLGL----GNTCDQIHPKVVN 383
G+LG GN QI K+ N
Sbjct: 495 DGKLGYDEIKGNV--QIPRKITN 515
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 84/344 (24%), Positives = 142/344 (41%), Gaps = 60/344 (17%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
+ ++ G HVLA+T G F WGR +GQLG G D + KP I
Sbjct: 677 IKHVSTGYFHVLAVTHE-----GATFGWGRNDNGQLGMGRK-DTVVSKPTRIKSLQDKVI 730
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG--------------------DYRSH-- 166
++G +HS F+SD G + G FG+LG G +Y+
Sbjct: 731 IMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLI 790
Query: 167 SSPVKVSSFVNKNVHQ---IACGMRHSLVLL---KDCLGNQVYGFGSGKRGQLGVSKDRI 220
+ ++++ + K + IA G HS+ + + +++ +G G GQ G
Sbjct: 791 ETKIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTG--HGSW 848
Query: 221 RSVSLPQVTI--GLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNCPQS 274
++ LPQ+ L D + + S + AL GH++ +G G +D Q
Sbjct: 849 QNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFNDEK--QF 906
Query: 275 LPSSLS--------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+P+ L F + G H L +T G V G + + +++S+ +
Sbjct: 907 MPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTN------TKINSSHKEYLY 960
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
++V N + K + A GA HS ++ TWG+ +G+ GL
Sbjct: 961 FDQVENEE--KAVLTACGANHSVLIDTKGVPYTWGFVGNGRCGL 1002
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 57/249 (22%)
Query: 5 LMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLS 64
LM E +G SA I+ I+ E ++ WG G G+LGTG+ + L P +L
Sbjct: 363 LMIEAGEGSSAAIS-----IKNE--------LFIWGVGLHGRLGTGKTANVLKPVMLEDL 409
Query: 65 SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
V +A G H L + GK WG G+LG +D + +P
Sbjct: 410 KDQKVEDIALGSNHSLCILR-----NGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLD 464
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSS---FVNKN- 179
+ + I+AG HS ++++G +++ G+ G+LG+ + + + P K+++ F K
Sbjct: 465 KEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTG 524
Query: 180 -------------------------------VHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
V Q CG ++ LL D Q+Y GS
Sbjct: 525 LNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLND---GQMYVCGSN 581
Query: 209 KRGQLGVSK 217
K GQLG SK
Sbjct: 582 KYGQLGFSK 590
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 195 KDCLGNQVYGFGSGKRGQLGVS--KDRIRSVSL---------PQVTIGLHDIEIVGISAN 243
+ C V+ +G G+LG++ + I ++ P + I I+ +S
Sbjct: 201 RRCGNGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCG 260
Query: 244 GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL---PSSLSFSQ----------AALGWNH 290
+ ALS EGH+Y+WG G NS Q++ P+ + + + A G NH
Sbjct: 261 NSFTLALSQEGHVYSWGLG-NSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNH 319
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
VL L G V G G L + P +++ L K++ I AG SA
Sbjct: 320 VLSLDHQGIVYSWGNGQGGRLGHGDETGENIP-----KEIIGLRQYKILMIEAGEGSSAA 374
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
++ + WG G HG+LG G T + + P
Sbjct: 375 ISIKNELFIWGVGLHGRLGTGKTANVLKP 403
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 82/354 (23%), Positives = 139/354 (39%), Gaps = 68/354 (19%)
Query: 108 EMVDALYPKPVTFF-DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS- 165
++ D P P+T + D + I H+S G+ H V+ G F G GQLG G +
Sbjct: 656 QLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTV 715
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV---------- 215
S P ++ S +K + A G HSL L LG +V G + G+LG+
Sbjct: 716 VSKPTRIKSLQDKVIIMTASGESHSLFLSD--LG-EVLCSGFNEFGELGIGLNSTSGGAD 772
Query: 216 ---SKDRIRSVSL------------PQVTIGLHDIEIVGISANGDRSAALSAEGH----- 255
+ D I + P++ GL I I+A + S A+
Sbjct: 773 KKENPDEIYDENYQRQLIETKIELTPKIIKGLESIGF--IAAGKNHSIAIRTYKRKEKAM 830
Query: 256 -LYTWGRGFNSTSDVNCPQS--LPS--------SLSFSQAALGWNHVLVLTGDGEVLMLG 304
L+TWG G++ + Q+ LP F QA+ G H + L G + G
Sbjct: 831 KLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG 890
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ-----IAAGAEHSAVVTENRAIMT 359
+ D P + L+ IQ I++G EH+ VT++ +
Sbjct: 891 YKPSVGIEDFNDEKQFMP--------ARLETPSKIQEPFKFISSGEEHNLAVTQSG--LV 940
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLP 413
+G+G++ + ++ H + + D+ +N + + CG+ + I +P
Sbjct: 941 YGFGKNTNTKINSS----HKEYLYF-DQVENEEKAVLTACGANHSVLIDTKGVP 989
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 23/220 (10%)
Query: 19 NAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGG 76
N I + +++ +K+++WG G GQ G G ++ PQ++ + L + +CG
Sbjct: 815 NHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGS 874
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAG 134
H +AL + + W G +G + D P + + IS+G
Sbjct: 875 KHTIALDTTGHI-------WFFGYKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSG 927
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI-ACGMRHSLVL 193
H+ V+ SG ++ G T ++ SH + N+ + ACG HS+++
Sbjct: 928 EEHNLAVTQSGLVYGFGKNTNTKIN----SSHKEYLYFDQVENEEKAVLTACGANHSVLI 983
Query: 194 LKDCLG-NQVYGFGSGKRGQLGVSKDRIR----SVSLPQV 228
D G +GF R L + KD + S+S P V
Sbjct: 984 --DTKGVPYTWGFVGNGRCGLKLEKDDAQQEQESLSAPTV 1021
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 16/260 (6%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNDEGQLGLGDTEERT-TFHLISFFTPQHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + P + + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVTTDGELYIF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P + S + + ++ KVIQ+A G EHS V+TEN + T+G G
Sbjct: 215 GEPENGKLGLPYELLSNHRIPQLVPEIPE----KVIQVACGGEHSVVLTEN-DLYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV 382
+ GQLGLG + P+VV
Sbjct: 270 KFGQLGLGTFLFETSEPRVV 289
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 149/336 (44%), Gaps = 61/336 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G GQLG G+ + ++FF ++ I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNDEGQLGLGDTEERTTFHLISFFT-PQHKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G D + P +V++ K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLPDMPNACVPHQVTT--GKPVSWISCGYYHSAFVTTD---GELYIFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + + +PQ+ + + +++ ++ G+ S L+ E LYT+G G
Sbjct: 224 LPYELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLT-ENDLYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T + V V ++
Sbjct: 270 -----KFGQLGLGT--FLFETSEPRV-----------------------------VESIK 293
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
G K+ I+ G H+A++T+ + T+G G HG+LGL
Sbjct: 294 GRKISYISCGENHAALLTDTGLMYTFGDGRHGKLGL 329
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + PQL+ V +ACGG H + LT
Sbjct: 210 ELYIFGEPENGKLGLPYELLSNHRIPQLVP-EIPEKVIQVACGGEHSVVLTE------ND 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++++G G GQLG G + + P+ V G + I++IS G NH+ ++D+G ++T G
Sbjct: 263 LYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRK--ISYISCGENHAALLTDTGLMYTFG 320
Query: 152 DGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG ++ + P+ S + V +ACG H +V
Sbjct: 321 DGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACGGCHMVVF 364
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 66/245 (26%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++ G +GQLG G + + L++ + + L+ G ALT G++F
Sbjct: 108 VYATGGNDEGQLGLGDTEERTTFHLISFFTPQHKIKQLSAGSNTSAALTE-----DGRLF 162
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG--------- 145
WG S GQ+G +M +A P VT ++ IS G+ HS FV+ G
Sbjct: 163 MWGDNSEGQIGLPDMPNACVPHQVTTGK----PVSWISCGYYHSAFVTTDGELYIFGEPE 218
Query: 146 -------------------------------C------------LFTCGDGTFGQLGHGD 162
C L+T G G FGQLG G
Sbjct: 219 NGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTENDLYTFGLGKFGQLGLGT 278
Query: 163 YRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
+ +S P V S + + I+CG H+ +L L +Y FG G+ G+LG+ +
Sbjct: 279 FLFETSEPRVVESIKGRKISYISCGENHAALLTDTGL---MYTFGDGRHGKLGLELENFT 335
Query: 222 SVSLP 226
+ +P
Sbjct: 336 NQFIP 340
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 238 VGISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALG 287
V +S + SA ++ LY WG+ G S S V+ P + P + AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKL--AACG 95
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
NH LV T G V GG+ G L D E ++ +S + K+ Q++AG+
Sbjct: 96 RNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHLISFFTPQH------KIKQLSAGS 149
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
SA +TE+ + WG GQ+GL + + P V G
Sbjct: 150 NTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTG 189
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 19/265 (7%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACG 186
I ISAG H+ ++S++G L+TCG GQLG + +SPV V +F + IACG
Sbjct: 37 IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACG 96
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
++HS+ L D G Q + +GS GQLG S + P++ L ++ ++
Sbjct: 97 LQHSMAL--DEWG-QPFSWGSDSMGQLG-SNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152
Query: 247 SAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSSLSFSQA--ALGWNHVLVLTGD 297
+ L+ G LY WG N ++ PQ+L S L A A G NH L+
Sbjct: 153 TVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQS 212
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G V G + HG L +R S P + L VKV I+ G + +A +T + +
Sbjct: 213 GAVFGWGKNSHGQLGLQDRESRCYP-----THLKTLRNVKVCHISCGEDFTAFLTLDGGV 267
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVV 382
T G GE+GQ G GNT D++ P+ V
Sbjct: 268 FTCGAGEYGQTGHGNTKDELVPRKV 292
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQ G G R + E +PQ L+ ++++ACG H AL+ G VF
Sbjct: 162 LYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQ-----SGAVF 216
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG+ S GQLG + YP + + + HIS G + + F++ G +FTCG G
Sbjct: 217 GWGKNSHGQLGLQDRESRCYPTHLKTLRNVK--VCHISCGEDFTAFLTLDGGVFTCGAGE 274
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQ GHG+ + P KV + V Q+ACG RH L +G ++ G G RGQLG
Sbjct: 275 YGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLCR----VGERILACGYGARGQLG 330
Query: 215 VSKDRIRSVSLPQVTIGLHD 234
V P VT +D
Sbjct: 331 CPHMAFALVPTP-VTFTPND 349
>gi|330792530|ref|XP_003284341.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
gi|325085687|gb|EGC39089.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
Length = 448
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 183/425 (43%), Gaps = 97/425 (22%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELS-PQLLNLSS--LSSVSMLACGGAHVLALTSPSSVIG 90
+KV+SWG+G GQLG G D +S P L+ LS+ + V+ + GG+H + + +
Sbjct: 4 IKVFSWGSGNLGQLGLGNTDDSVSSPSLVLLSNNEIRKVNDIVGGGSHTMMVAND----- 58
Query: 91 GKVFSWGRGSSGQLGHGEMVDALY---PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G ++++G GQLG + + Y P+PV +F + I + S GW+HS +G +
Sbjct: 59 GDLYTFGSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKNCSGGWSHSLACDVNGFV 118
Query: 148 FTCGDGTFGQLG------------------------------------------------ 159
++ G + QLG
Sbjct: 119 YSWGSNSHSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNNNNNSNTEVKRKIVFKKKIIN 178
Query: 160 HGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL---- 213
+ + + +P+ ++ F+N+ + ++CGMRHS+VL D +VYG+G K GQL
Sbjct: 179 NINKENQFNPININYFINEKIKIISVSCGMRHSIVLSSDF---KVYGWGCNKFGQLSNNV 235
Query: 214 -GVSKDRIRSVSL-----PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
GV ++ + + Q++ G ++ + + + G L G +T+
Sbjct: 236 QGVLQELPKLLEFGGEGVSQISCGFKHTVLLDTTKKKLITFGFNRYGQL-----GNGNTT 290
Query: 268 DVNCPQSLP---------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
D + P +P S+ + GW++ LT G++ + G +G+L D +
Sbjct: 291 DQSQPVIIPIEPILNDGDCSVIVKEIQCGWSNSCFLTNQGKLYLCGRGEYGILGDERDL- 349
Query: 319 STRPLSV----ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
T LSV + K + + + G+EH + EN I + GW EH QLGL C
Sbjct: 350 -TVDLSVQNIFKVLKSKPFNSEPISSFSMGSEHVLIQLENNDIYSVGWNEHYQLGL---C 405
Query: 375 DQIHP 379
+ + P
Sbjct: 406 EVVIP 410
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 22/323 (6%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
KVFSWG G+ GQLG G D++ P V + + I G +H+ V++ G L+T
Sbjct: 5 KVFSWGSGNLGQLGLGNTDDSVSSPSLVLLSNNEIRKVNDIVGGGSHTMMVANDGDLYTF 64
Query: 151 GDGTFGQLGHG---DYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGF 205
G GQLG + + ++P V F N ++ C G HSL D G VY +
Sbjct: 65 GSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKNCSGGWSHSLAC--DVNG-FVYSW 121
Query: 206 GSGKRGQLGVSKDRIRSVSLP----QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
GS QLG++ + I + Q+ I + ++N + + + +
Sbjct: 122 GSNSHSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNNNNNSNTEVKRKIVFKKKIINNIN 181
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
N + +N + + + G H +VL+ D +V G + G LS+ + +
Sbjct: 182 KENQFNPININYFINEKIKIISVSCGMRHSIVLSSDFKVYGWGCNKFGQLSN-----NVQ 236
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVV-TENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
+ L K+ G V QI+ G +H+ ++ T + ++T+G+ +GQLG GNT DQ P
Sbjct: 237 GVLQELPKLLEFGGEGVSQISCGFKHTVLLDTTKKKLITFGFNRYGQLGNGNTTDQSQPV 296
Query: 381 VVNLGDEFQNRDTQL---EVFCG 400
++ + + D + E+ CG
Sbjct: 297 IIPIEPILNDGDCSVIVKEIQCG 319
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 154/337 (45%), Gaps = 44/337 (13%)
Query: 93 VFSWGRGSSGQLGHG--------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
V +WG G GQLG G +VDAL P + + + G +S + D
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEP----------FNVRSVVGGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ S+P V S N + Q A G H L + D G + Y
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAV--DDQG-RAY 113
Query: 204 GFGSGKRGQLG--VSKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+G + GQ G SKD R + +P+ + + ++A G S L+ EG++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--QQLTVRQVAAGGTHSVVLTREGYV 171
Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+TWG+ + ++ P + + A+G H L L DG + G + +G L
Sbjct: 172 WTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-- 229
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT- 373
T+P S + V LD + ++ IAAG HS +T + WG GEHG+LG G+
Sbjct: 230 --TGDTQPRSYPI-PVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286
Query: 374 -CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL D ++V CG + A++R
Sbjct: 287 KSSKMLPQKVNL---LAGEDI-IQVSCGGTHSVALTR 319
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG G LG E +P L+ + + A GG H LA+ G+
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQ-----GRA 112
Query: 94 FSWGRGSSGQLGH-------GEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
++WG GQ G G V D + PK + T+ ++AG HS ++
Sbjct: 113 YAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA----QQLTVRQVAAGGTHSVVLTRE 168
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G ++T G GD + S PV+V +NV IA G H+L L +D ++
Sbjct: 169 GYVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAVGAFHNLALKED---GTLWA 219
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF- 263
+G+ + GQLG + RS +P GL D+ +V I+A G S AL+ EG +Y WGRG
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEH 277
Query: 264 -------NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
N S PQ +L + Q + G H + LT DG + G HG L
Sbjct: 278 GRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Query: 315 ERVSSTRPLSVAL 327
+V++ +PL + +
Sbjct: 338 RKVTTGQPLELPI 350
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 157/359 (43%), Gaps = 39/359 (10%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ +++ +V + G + LA+ GK+F+WG
Sbjct: 9 AWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICD-----DGKLFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSHS-SPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTRE---GYVWTWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
Q D I+ +S+P GL ++ ++ + A + AL +G L+ WG G T
Sbjct: 176 --QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGT 230
Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
D P+S P L+ A G H LT +GEV G HG L + S+
Sbjct: 231 GDTQ-PRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ L +KV+ L G +IQ++ G HS +T + I ++G G+HG+LG G P
Sbjct: 290 KMLP---QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLGTG P + L L+ V +A GG H ALT+ G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNE-----GEVY 270
Query: 95 SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGRG G+LG G+ + P+ V G I +S G HS ++ G +F+ G
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGE--DIIQVSCGGTHSVALTRDGRIFSFGR 328
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN----------------VHQIACGMRHSLVLLK 195
G G+LG+G + P+++ + +ACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 179/411 (43%), Gaps = 53/411 (12%)
Query: 28 EEEQQVVKVWSWGAGT-DGQLGTGR---------LHDELSPQLLNLSSLSSVSMLACGGA 77
E+ + + V+ WG DG LG G + D P++L ++CG
Sbjct: 255 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 314
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
+ + +T G+++SWG S G+LGHG +PK + FDG T+ G H
Sbjct: 315 YAVLVTKQ-----GQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGS--TVELADCGEFH 367
Query: 138 SGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
+ V+ SG L+ GDG G LG G SH PV++ NV I+CG H+ +
Sbjct: 368 TCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVT 427
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
+++ FG G G LG DRI S ++P+ L+ + + SAA+
Sbjct: 428 S---AGKLFTFGDGTFGALG-HGDRI-STNIPREVEALNGCRTIRTACGVWHSAAVVSVF 482
Query: 251 ---SAEGHLYTWGRGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGE 299
S+ G L+TWG G + + P S+ + SF Q A G + + L+ G+
Sbjct: 483 GEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQ 542
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V +G +DP + R S L V ++A G H AV+ + T
Sbjct: 543 VYAMG------TADPSQDDVVRAPSCI---EGGLGKSFVQEVACGYHHIAVLNSKAEVYT 593
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
WG G +GQLG G+T + P +V Q R +V CGS +T I H
Sbjct: 594 WGKGSNGQLGHGDTEYRRMPTLVKALKGKQVR----KVVCGSNYTATICLH 640
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 25/334 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G P+L++ S+V + CG H A+T+ G ++
Sbjct: 324 QLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTT-----SGDLY 378
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LG G A + KPV + IS G H+ FV+ +G LFT G
Sbjct: 379 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFG 436
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFGS 207
DGTFG LGHGD S + P +V + + ACG+ HS ++ + +++ +G
Sbjct: 437 DGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGD 496
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
G G+LG I S +P L ++ + ALS G +Y G S
Sbjct: 497 GDDGKLG--HGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQD 554
Query: 268 D-VNCPQSLPSSL--SFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
D V P + L SF Q A G++H+ VL EV G +G L + P
Sbjct: 555 DVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMP- 613
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V L G +V ++ G+ ++A + ++ I
Sbjct: 614 ----TLVKALKGKQVRKVVCGSNYTATICLHKPI 643
>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
Length = 400
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 69/372 (18%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ SWG GQ G G D P+LL + + +A GG + + S G+V
Sbjct: 4 IASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKS----GRV 59
Query: 94 FSWGRGSSGQLGHG-----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
S+G G LGHG ++ D L P+ + + + +SAG HSG V+ G ++
Sbjct: 60 LSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEK--VICVSAGELHSGCVTADGDVY 117
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVS--SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
T G+G GQLG GD R H P +V+ ++ V ++CG RH+LV+ ++ +V+ +G
Sbjct: 118 TWGEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEE---GEVFSWG 174
Query: 207 SGKRG---QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
G+ G L ++ D P++ L VG+SA S L G LYT+G G
Sbjct: 175 LGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSG- 233
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ ALG HG L V P+
Sbjct: 234 ------------------ASGALG--------------------HGDL-----VGQEFPV 250
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V + +N V++ Q++AG + S V+ + WG + G++GLGN D P+ V+
Sbjct: 251 KVMQFEENN---VRIHQMSAGVDMSMAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRKVD 307
Query: 384 LGD-EFQNRDTQ 394
+GD F+ D +
Sbjct: 308 VGDANFKGVDVE 319
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 27/290 (9%)
Query: 35 KVWSWGAGTDGQLGTG-----RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
+V S+G G LG G +L D L P+ ++ V ++ G H +T+
Sbjct: 58 RVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTAD---- 113
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G V++WG G GQLG G+ L P+ VT ++++S G H+ V++ G +F+
Sbjct: 114 -GDVYTWGEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFS 172
Query: 150 CGDGTFG-----QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G G +G L D P V + ++ G RHS+VL + +Y
Sbjct: 173 WGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEH---GGLYT 229
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
FGSG G LG + + + +++ I +SA D S A+S G +Y WG+
Sbjct: 230 FGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWGKAKE 289
Query: 262 ---GFNSTSDVNCPQSL---PSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
G + +D+ P+ + ++ G+ H L++ DG V GG
Sbjct: 290 GRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDGSVYQCGG 339
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 19/256 (7%)
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQ GHGD S P + + V Q+A G ++LK +V FG+ + G L
Sbjct: 13 GQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKS--GRVLSFGTAQYGAL 70
Query: 214 GVSKDRIRSVS---LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
G D + +S P+ L + +++ +SA S ++A+G +YTWG GF +
Sbjct: 71 GHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGEGFCGQLGLG 130
Query: 270 -NCPQSLPSSLSF--------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
P LP ++ S + G H LV+T +GEV G +G+L D ++
Sbjct: 131 DRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYGVL-DALNLTLD 189
Query: 321 RPLSVALEK-VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P K V L + + ++AG HS V+ E+ + T+G G G LG G+ Q P
Sbjct: 190 DPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALGHGDLVGQEFP 249
Query: 380 KVVNLGDEFQNRDTQL 395
V +E R Q+
Sbjct: 250 VKVMQFEENNVRIHQM 265
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 151/327 (46%), Gaps = 31/327 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACG---GAHVLALTSPSSVIG 90
V S G G+ G+LG G D S +L ++S+L V LA H +ALT
Sbjct: 801 VLSCGEGSYGRLGQGNSDD--SNRLTHISALQGFIVKQLATSTGSDGHAIALTE-----N 853
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+VFSWG G G+LGHG P+ + G + ++ G+ HS V+ G LFT
Sbjct: 854 GEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQE--VVQVACGFKHSAVVTIDGKLFTF 911
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G+LGHG + P +V + N + Q+ACG+ H++++ +D L V+ G G
Sbjct: 912 GYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNL--TVWACGDGDY 969
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------N 264
G+LG+ ++ P L + I IS +AAL+ +G L+ +G+
Sbjct: 970 GKLGIGGTSAKTS--PTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCET 1027
Query: 265 STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
TS PQ + SS ++G H + LT G V G + G L P
Sbjct: 1028 RTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEP 1087
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSA 349
V +L G + QI+AG HSA
Sbjct: 1088 -----TLVESLSGKNIRQISAGRTHSA 1109
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 145/311 (46%), Gaps = 31/311 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V +ACG H +T I GK+F
Sbjct: 855 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVT-----IDGKLF 909
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LGHG + P+ V + Y I ++ G NH+ VS D+ ++ CGDG
Sbjct: 910 TFGYGDYGRLGHGSTTNKKIPERVMALEN--YIIGQVACGLNHTVIVSQDNLTVWACGDG 967
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G + +SP K+ + +I+CG + + L D +++ FG +
Sbjct: 968 DYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWD---GKLFMFGQDR--MC 1022
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G + R PQV L I+ IS + + AL+++G +YTWG G T+
Sbjct: 1023 GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTN 1082
Query: 268 DVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
V P +L SLS Q + G H + + + + H +L PE + S L
Sbjct: 1083 HVQEP-TLVESLSGKNIRQISAGRTHSAAWSCEHD-----DAGHTLLGTPESIPSQYDL- 1135
Query: 325 VALEKVSNLDG 335
L VS LD
Sbjct: 1136 --LADVSVLDA 1144
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 162/361 (44%), Gaps = 36/361 (9%)
Query: 36 VWSWGAGTDGQL---GTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
V+ +GAG GQL G+G L PQL S + CG + + G
Sbjct: 752 VYLFGAGRHGQLAEVGSGVL----VPQLTK--SFHEARKVVCGQNCTFIINN-----NGV 800
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCG 151
V S G GS G+LG G D+ ++ G S G + H+ ++++G +F+ G
Sbjct: 801 VLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWG 860
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DG +G+LGHG+ P ++ + + V Q+ACG +HS V+ D +++ FG G G
Sbjct: 861 DGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID---GKLFTFGYGDYG 917
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGF 263
+LG + + P+ + L + I+G A G + ++ +L W G
Sbjct: 918 RLGHGSTTNKKI--PERVMALENY-IIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGI 974
Query: 264 NSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
TS P + S + + + G LT DG++ M G M + E + T
Sbjct: 975 GGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR--MCGNCE--TRTS 1030
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P S + V+ L +I I+ GAEH+ +T + TWG GQLGLG+T P +
Sbjct: 1031 P-SFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQEPTL 1089
Query: 382 V 382
V
Sbjct: 1090 V 1090
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 75/324 (23%)
Query: 93 VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
V+ +G G GQL G G +V P+ F R + G N + ++++G + +
Sbjct: 752 VYLFGAGRHGQLAEVGSGVLV----PQLTKSFHEARKVV----CGQNCTFIINNNGVVLS 803
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---HSLVLLKDCLGNQVYGFG 206
CG+G++G+LG G+ + +S+ V Q+A H++ L ++ +V+ +G
Sbjct: 804 CGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTEN---GEVFSWG 860
Query: 207 SGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G G+LG + DR R P+ L E+V
Sbjct: 861 DGDYGKLGHGNSDRQRR---PRQIEALRGQEVV--------------------------- 890
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
Q A G+ H V+T DG++ G +G L + P
Sbjct: 891 -----------------QVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIP--- 930
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTE-NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
E+V L+ + Q+A G H+ +V++ N + G G++G+LG+G T + P +
Sbjct: 931 --ERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKI-- 986
Query: 385 GDEFQNRDTQLEVFCGSGFTYAIS 408
E +R ++ CG+ FT A++
Sbjct: 987 --EVLSRVGIKKISCGAQFTAALT 1008
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q + VW+ G G G+LG G + SP + + S + ++CG ALT
Sbjct: 956 QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALT-----WD 1010
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GK+F +G+ + P+ VT H I IS G H+ ++ G ++T
Sbjct: 1011 GKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHH--IIDISVGAEHTIALTSKGIVYTW 1068
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
G T GQLG G P V S KN+ QI+ G HS
Sbjct: 1069 GSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHS 1108
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 149/338 (44%), Gaps = 28/338 (8%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
L P+ + +V + CG H + + G V++ G GQLGH + P
Sbjct: 7 LEPRRCDFFINKNVRDVGCGSRHTVFVLD-----DGTVYTCGCNDLGQLGHDKSRKK--P 59
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSS 174
V D TI +S G H+ ++D G +F+ G GQ+G + P + S
Sbjct: 60 DQVGALDAQ--TIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKS 117
Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
+ + Q+ACG HSL L K+ + +Y +G + GQLG+ + I+ S P+ L
Sbjct: 118 LYDIQIVQVACGHHHSLALSKE---SDIYSWGQNQYGQLGLGSE-IKKESAPRHIKSLAG 173
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAAL 286
I I+A G S AL+ G ++ WGR G N +D + P L S S
Sbjct: 174 IPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICC 233
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H LT +G V G +G L P KV L G V QIA G +
Sbjct: 234 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNP-----RKVFELMGSIVTQIACGRQ 288
Query: 347 HS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
H+ A V + I ++G G +GQLG G+T ++ P V
Sbjct: 289 HTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 326
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 26/282 (9%)
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
L P+ FF + + G H+ FV D G ++TCG GQLGH +S P +
Sbjct: 6 VLEPRRCDFFINK--NVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHD--KSRKKPDQ 61
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVT 229
V + + + ++CG H+L L QV+ +G GQ+G V++D IR +P+
Sbjct: 62 VGALDAQTIVAVSCGEAHTLALNDK---GQVFSWGHAAHGQIGLSVAEDYIR---VPRNI 115
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS-TSDVNCPQSLPS--SLS 280
L+DI+IV ++ S ALS E +Y+WG+ G S + P+ + S +
Sbjct: 116 KSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIP 175
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
F+ A G H LT G + G + G L + + P AL K +L K+I
Sbjct: 176 FAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAP---ALLK--SLRSQKIIH 230
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
I G +H+A +T+ + T+G G +GQLG +T +++P+ V
Sbjct: 231 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV 272
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 36 VWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
++SWG GQLG G + E +P+ ++ SL+ + +A GG H ALT + G
Sbjct: 142 IYSWGQNQYGQLGLGSEIKKESAPR--HIKSLAGIPFAHIAAGGGHSFALT-----MSGA 194
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F WGR GQLG + D P + + I HI G +H+ ++ G +FT G
Sbjct: 195 IFGWGRNKFGQLGLNDETDRSAPALLKSLRSQK--IIHICCGEDHTAALTKEGGVFTFGA 252
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +GQLGH +P KV + V QIACG +H+L + ++Y FG G GQ
Sbjct: 253 GGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS--SGRIYSFGLGGNGQ 310
Query: 213 LG 214
LG
Sbjct: 311 LG 312
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
+V+SWG GQ+G D + P+ N+ SL + + +ACG H LAL+ S
Sbjct: 88 QVFSWGHAAHGQIGLSVAEDYIRVPR--NIKSLYDIQIVQVACGHHHSLALSKESD---- 141
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++SWG+ GQLG G E+ P+ + G + HI+AG HS ++ SG +F
Sbjct: 142 -IYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPF--AHIAAGGGHSFALTMSGAIFGW 198
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G FGQLG D S+P + S ++ + I CG H+ L K+ V+ FG+G
Sbjct: 199 GRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE---GGVFTFGAGGY 255
Query: 211 GQLG 214
GQLG
Sbjct: 256 GQLG 259
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG D +P LL + + CG H ALT G VF+
Sbjct: 195 IFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE-----GGVFT 249
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H+ FV SG +++ G G
Sbjct: 250 FGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGG 307
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 308 NGQLGTGSTSNRKSPFTVK 326
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DALAPQLVQGLVSRNIVKIAAHSDGHHYLALAAT-----GEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLV 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D + +T+P AL LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFD--TLHATKPEPAAL---PGLDTKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P+L++ + V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P V + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + + V QIAC + L+L + SG+
Sbjct: 429 WGLIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSR-----------SGRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
S D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YSSDAL----APQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ L S+ QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPK-LISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK+V ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLV---EKLQDLDV-VKVRCGSQFSVALTK 675
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V V++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLVSRNIVKIAAHSDGHHYLALAAT---GEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P++ + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P V EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLV--EKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNDLAIDLQQTAVV-VMAHLDRLATPCMPPLCSSPASHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL SQ A L+L+ G V S +
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDAL- 483
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 484 --------------APQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PK+++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAIT 568
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 187/417 (44%), Gaps = 41/417 (9%)
Query: 5 LMEETEKGKSALINNA-KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN- 62
L +ETE K ++N P + E E KV+ WG QLG + P+
Sbjct: 2627 LAQETE-CKLGIVNQMGSPSMRENIE----CKVFVWGLNDKDQLGGLKGSKIKEPKFSEV 2681
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
+S+L +++ GG+ L + S GKVF+ G G++G+LG G + PKP+T
Sbjct: 2682 ISNLKPMNI--AGGSKSLFIVSHD----GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLS 2735
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
+ + +G H+ ++ G +F+ G+G G+LGHG+ S+ P V S K +
Sbjct: 2736 PYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRD 2795
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ACG HS + ++Y +GSG+ G+LG D + + QV H+ +V + A
Sbjct: 2796 VACGSSHSAAVTS---SGELYTWGSGEYGRLG-HGDNVPQLKPKQVRALSHE-RVVQV-A 2849
Query: 243 NGDRSA---ALSAEGHLYTWGRG-FNS-----TSDVNCPQSLPS--SLSFSQAALGWNHV 291
G R A AL+ +Y+WG G F + + PQ++ + S Q G
Sbjct: 2850 CGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFS 2909
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
L L+ +G+V G + L P + V L VIQ++ GA H V
Sbjct: 2910 LALSKNGKVWTWGKGDYFRLGHGSDSHVRWP-----QVVEELADKNVIQVSVGALHCIAV 2964
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
T+ + WG +HGQ G GNT P +V + N V CGS + A S
Sbjct: 2965 TDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRGLEAITN------VACGSSHSVAWS 3015
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISA 133
GG H LALTS G VFSWG G G+LGHG PK + + D H + ++
Sbjct: 3714 GGKHCLALTS-----SGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKH---VVSVAC 3765
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSL 191
G HS ++ SG L+T G G +G+LGHGD P KV NV +ACG +L
Sbjct: 3766 GGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTL 3825
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ +D L V+ +G G G+LG + PQ L + ++ + S AL+
Sbjct: 3826 CVSRDGL---VWSWGDGDYGKLG--RGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALT 3880
Query: 252 AEGHLY--------TWGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEV 300
A G +Y G G S V PQ++ +L Q A+G H + T GEV
Sbjct: 3881 AAGVVYTWGKGDYHRLGHG--SEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEV 3938
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G + G L D + RP + V++L G K+ ++A G+ H+
Sbjct: 3939 FTWGDNDEGQLGDGSTNAIQRP-----KLVASLKGKKMNRVACGSAHT 3981
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 13/227 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G DG+LG G P+L+ V +ACGGAH +T+ G++++
Sbjct: 3727 VFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITA-----SGELYT 3781
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G G+LGHG+ D L PK V GH +G + VS G +++ GDG +
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDY 3841
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G P K+ S N V ++ CG + S+ L VY +G G +LG
Sbjct: 3842 GKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTA---AGVVYTWGKGDYHRLGH 3898
Query: 216 -SKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG 260
S+D +R PQ G L ++ ++ A + G ++TWG
Sbjct: 3899 GSEDHVRR---PQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWG 3942
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 172/382 (45%), Gaps = 32/382 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG + + + L++L V ++ G + ALTS GKV++ G
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVG-GEQTLFALTS-----DGKVYATG 3677
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G+ G+LG G P + T +++G H ++ SG +F+ G+G G+
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GV 215
LGHG P + S +K+V +ACG HS + ++Y +G G+ G+L G
Sbjct: 3738 LGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITA---SGELYTWGKGRYGRLGHGD 3794
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
S+D+++ + + + H++ V + ++ +S +G +++WG G +
Sbjct: 3795 SEDQLKPKKVEE--LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGC 3852
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
PQ + S + + G + LT G V G + L RP +V
Sbjct: 3853 KFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQ- 3911
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGD 386
L G +VIQ+A G+ H T++ + TWG + GQLG G+T PK+V +L
Sbjct: 3912 ---GALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKG 3968
Query: 387 EFQNRDTQLEVFCGSGFTYAIS 408
+ NR V CGS T + S
Sbjct: 3969 KKMNR-----VACGSAHTVSWS 3985
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 21 KPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGRLHDELSPQLLNLS 64
+PK+ E ++ VV V ++WG G G+LG G D+L P+ +
Sbjct: 3748 RPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEEL 3807
Query: 65 SLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH 124
+ +V +ACG L G V+SWG G G+LG G +P+ +
Sbjct: 3808 AGHNVLDVACGSGDAQTLCVSRD---GLVWSWGDGDYGKLGRGGSDGCKFPQKIDSL--Q 3862
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQI 183
+ + G S ++ +G ++T G G + +LGHG P V + K V Q+
Sbjct: 3863 NAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQV 3922
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
A G H + +V+ +G GQLG
Sbjct: 3923 AVGSLHCVACTD---SGEVFTWGDNDEGQLG 3950
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 111 bits (278), Expect = 6e-22, Method: Composition-based stats.
Identities = 108/386 (27%), Positives = 171/386 (44%), Gaps = 46/386 (11%)
Query: 38 SWGAGTDGQLG---TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+WG+ ++ +LG + + +P+ L ++S + ++ G + ALT G V+
Sbjct: 602 TWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTE-----NGDVY 656
Query: 95 SWGRGSSGQ-----LGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
WGRGS LG ++ D L P K + D I +S G+ HS V +G L
Sbjct: 657 MWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD-----IVVVSIGFYHSAAVRANGELL 711
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
T G G GQLGHGD ++ P + S + + Q+ CG +H++ L K+ +VY +GS
Sbjct: 712 TWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKN---GKVYTWGSS 768
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--FNST 266
+ GQLG+ D R P L ++ I++ A L+ + +G G +
Sbjct: 769 EYGQLGLG-DTTRYCK-PMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGAA 826
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSH---HGMLSDPERVSSTR 321
S ++ P +PS L + G ++ G+V G HG + ST
Sbjct: 827 SIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQELGHG----NNQTESTP 882
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
L AL S + QI+ G H+A +T++ I T G GQLG DQ PK
Sbjct: 883 KLVEALRNQS------IRQISCGGRHTAFLTDSGRIFTSGKDSFGQLG-HQAGDQNKPKK 935
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ E + T + V CG + A+
Sbjct: 936 I----ESLTKTTFISVSCGENYNIAL 957
Score = 71.2 bits (173), Expect = 9e-10, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 52/205 (25%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI----- 89
KV++WG+ GQLG G P + +V +A G H LT+ V+
Sbjct: 761 KVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNG 820
Query: 90 --------------------------------------GGKVFSWGRGSSGQLGHGEMVD 111
G V++WG G +LGHG
Sbjct: 821 AAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQT 878
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSSP 169
PK V +I IS G H+ F++DSG +FT G +FGQLGH GD + P
Sbjct: 879 ESTPKLVEALRNQ--SIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGD---QNKP 933
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLL 194
K+ S ++CG +++ L
Sbjct: 934 KKIESLTKTTFISVSCGENYNIALF 958
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 168/399 (42%), Gaps = 41/399 (10%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
++ ++ +V +S+G + G+L D P ++ + +ACG L
Sbjct: 1 MDSDKIAHEVFGAYSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLF 60
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEM--VDALYPKPVTFFDGHRYTITHISA--GWNHSG 139
G VF+ G SGQ G G V +L P + I HI + G H
Sbjct: 61 ET-----GDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTED----IAHIRSANGCEHLT 111
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
+S SG L+T G + GQLGHG ++P K+ + +V ++AC H++V+ +
Sbjct: 112 AISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTME--- 168
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+Y FG GQLG+ R V +P + ++ ++ + G + +
Sbjct: 169 GTLYAFGRNDLGQLGIDDGMDRHVPVPLTY--FNSRPVLAVACGQHHTVVSLTNGGVVAF 226
Query: 260 GR------GFNSTSDVNCPQSLPS----SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
G+ G T D + SL + SL A G+ H + L G V G + +G
Sbjct: 227 GKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYG 286
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + P + L +Q+ G H+ V++E+ + +G HGQLG
Sbjct: 287 QLGHGHRHHLSEP-----TLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLG 341
Query: 370 LGNTCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAI 407
LGN D P+++ +L D+F V SGF ++I
Sbjct: 342 LGNLIDCTSPQIIASLRDKFV-------VKVASGFYHSI 373
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++++G GQLG D P L + V +ACG H + S+ G V +
Sbjct: 171 LYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVV-----SLTNGGVVA 225
Query: 96 WGRGSSGQLGHGEMVD-----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+G+ GQLG G +D +L P+ + ++ G+ H+ +++ G +++
Sbjct: 226 FGKNDHGQLGTGYTLDYHASPSLLAAPLD-----SLVVPSLACGYYHTIALAEHGSVYSF 280
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLGHG S P + + + Q+ CG H+LVL +D +VY FG
Sbjct: 281 GRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSED---GKVYPFGRNNH 337
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
GQLG+ + + PQ+ L D +V +++ S L+A
Sbjct: 338 GQLGLGN--LIDCTSPQIIASLRDKFVVKVASGFYHSICLTA 377
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 165/358 (46%), Gaps = 32/358 (8%)
Query: 37 WSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+ WG G GQL GR L+P L+ SS SS + CG + + G V +
Sbjct: 994 YLWGGGRHGQLCEAGR--SVLTP--LHTSSFSSAQQIICGQNCTFVIQA-----NGTVLA 1044
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGT 154
G GS G+LG G D V+ G T S G + HS +++SG +F+ GDG
Sbjct: 1045 CGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGD 1104
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LGHG+ P ++ + + V QIACG +HS V+ D ++ FG+G G+LG
Sbjct: 1105 YGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVD---GKLLTFGNGDYGRLG 1161
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--------RGFNST 266
+ + + P+ L + I ++ + + +SA+G TW G +T
Sbjct: 1162 LGT--VCNRKTPERVKALENYHIGHVACGLNHTVCVSADGS-TTWAFGDGDYGKLGLGNT 1218
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
S + P + S L + A G + LT DG VL G ++ + P
Sbjct: 1219 SAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTP-- 1276
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+KV+ L G + ++ G+EH+ +T + + WG GQLGLG+T P+++
Sbjct: 1277 ---QKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLL 1331
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 149/336 (44%), Gaps = 48/336 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGA--HVLALTSPSSVIGGK 92
V + G G+ G+LG G D S +++ L ++ G+ H LALT G+
Sbjct: 1042 VLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTE-----SGE 1096
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ + G + I+ G+ HS V+ G L T G+
Sbjct: 1097 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE--VIQIACGFKHSAVVTVDGKLLTFGN 1154
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G+LG G + +P +V + N ++ +ACG+ H++ + D G+ + FG G G+
Sbjct: 1155 GDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCVSAD--GSTTWAFGDGDYGK 1212
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RGFNSTSDVN 270
LG+ +S P L +++ ++ S AL+ +G + TWG R T
Sbjct: 1213 LGLGNTSAKST--PVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQM 1270
Query: 271 CPQSLPSSLS------FSQAALGWNHVLVLTGDGEVL--------MLGGSHHGMLSDPER 316
P ++ + +G H L LT DG V LG H G + +P+
Sbjct: 1271 RGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQL 1330
Query: 317 ---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
+ S+ P+ QI+AG HSA
Sbjct: 1331 LGGLGSSEPIK---------------QISAGRTHSA 1351
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 26/268 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G G+LG G + P+ + V +ACG H +T + GK+
Sbjct: 1096 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVT-----VDGKLL 1150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS-DSGCLFTCGDG 153
++G G G+LG G + + P+ V + Y I H++ G NH+ VS D + GDG
Sbjct: 1151 TFGNGDYGRLGLGTVCNRKTPERVKALEN--YHIGHVACGLNHTVCVSADGSTTWAFGDG 1208
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LG G+ + S+PVK+ + V ++ACG + S+ L +D + G+ +
Sbjct: 1209 DYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRD-----GFVLTWGQDRLI 1263
Query: 214 GVSKDRIRSVSLPQ--VTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNS 265
G ++ ++R PQ T+ H IE V + + + + AL+++G+++ WG G
Sbjct: 1264 GQTEAQMRGHCTPQKVTTLAGHFIEEVVVGS--EHTLALTSDGNVWGWGLNADGQLGLGH 1321
Query: 266 TSDVNCPQ---SLPSSLSFSQAALGWNH 290
T V PQ L SS Q + G H
Sbjct: 1322 TGTVREPQLLGGLGSSEPIKQISAGRTH 1349
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L LT GEV G +G L RP ++ L G +VIQIA G +HSA
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNSDRQRRP-----RQIEALQGEEVIQIACGFKHSA 1141
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
VVT + ++T+G G++G+LGLG C++ P+ V + + V CG T +S
Sbjct: 1142 VVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIG----HVACGLNHTVCVS 1196
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 91 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 145
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G YP + D + + ++ G +HS ++ G LFT G G
Sbjct: 146 YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 203
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 204 KHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 261
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 262 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 319
Query: 274 SLPS 277
++P+
Sbjct: 320 TIPT 323
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 30/258 (11%)
Query: 69 VSMLACGGA-----HVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFD 122
+++L GGA +LA + + G++F+WG+ GQLG G + P+ V
Sbjct: 63 LAVLERGGAGVQVHQLLAGSGGARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 122
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G + ISAG HS +S SG +++ G FGQLG G S P + N+ V
Sbjct: 123 G--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEF 180
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
+ACG HS +L +D L ++ FG+GK GQLG +++ +R P + L + + I
Sbjct: 181 VACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELR----PCLVAELVEYRVTQI 233
Query: 241 SANGDRSAALSAE-GHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLV 293
+ + A ++ G ++++G G + T D P LP +S S+ +H
Sbjct: 234 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVSSSEELKLESH--- 288
Query: 294 LTGDGEVLMLGGSHHGML 311
T + E++M+ G + +L
Sbjct: 289 -TSEKELIMIAGGNQSIL 305
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+++ +G GQLGV + + S + PQ+ L + + ISA S ALS G++Y+WG
Sbjct: 91 ELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWG 149
Query: 261 R------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ G T + P SL L + A G +H +LT DG + G HG L
Sbjct: 150 KNEFGQLGLGHTESKDYP-SLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQL 208
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGL 370
+ RP VA L +V QIA G H+ A V++ + ++G G+ GQLG
Sbjct: 209 GHNSTQNELRPCLVA-----ELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 263
Query: 371 GNTCDQIHPKVVNL 384
G T DQ+ P V +
Sbjct: 264 GGTRDQLMPLPVKV 277
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 249 ALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
A + G L+ WG R F ST+ + L + + +Q + G H + L+ G
Sbjct: 85 ARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLAQISAGEAHSMALSMSG 143
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ G + G L S P + LD KV +A G HSA++T++ +
Sbjct: 144 NIYSWGKNEFGQLGLGHTESKDYP-----SLIEGLDNQKVEFVACGGSHSALLTQDGLLF 198
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
T+G G+HGQLG +T +++ P +V + + R TQ+ CG T A
Sbjct: 199 TFGAGKHGQLGHNSTQNELRPCLV--AELVEYRVTQIA--CGRWHTLA 242
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 172/371 (46%), Gaps = 52/371 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----------VSMLACGGAHVLALTS 84
+++ +G DGQLG E Q++ + L V +A G H L L+
Sbjct: 5 QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVD---ALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
GKV+S G +G+LG G + + +YP ++ +I ISAG +HS V
Sbjct: 65 -----DGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS----STVSIIQISAGRSHSMAV 115
Query: 142 SDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
SD G LF G + GQL GD + +P +V S Q+ACG H++ L G
Sbjct: 116 SDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSL--PETVQVACGASHTVSLNG---GG 170
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+V+ +G G RIR S +V I + I IV ISA + AL+A G L+ WG
Sbjct: 171 RVFIWGQQSDG-------RIRH-SPAEVEIFI-SIPIVQISAGNLFTMALTASGTLFAWG 221
Query: 261 R------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-- 312
+ G + DV P ++P+ S G +H + LT +G V G G L
Sbjct: 222 KNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG 281
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P R + + ++ + G V +IA G H+ VV N + T+G +GQLG GN
Sbjct: 282 QPNRSQN------CMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGHGN 334
Query: 373 TCDQIHPKVVN 383
T +QI P+V++
Sbjct: 335 TRNQITPRVID 345
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
A G H L L+ DG+V G +++G L R S + V V +IQI+AG
Sbjct: 53 ASGERHTLFLSDDGKVWSCGSNYNGELGR----GGVREGSYTIYPVHISSTVSIIQISAG 108
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGL-GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
HS V+++ + WG HGQL + G+ PK V E ++V CG+
Sbjct: 109 RSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE------TVQVACGASH 162
Query: 404 TYAIS 408
T +++
Sbjct: 163 TVSLN 167
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 157/342 (45%), Gaps = 33/342 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WGA GQLG G D +P+ + LS V +A G H +AL + G V++
Sbjct: 320 LWAWGANYYGQLGDGTRKDHDTPK--RVQGLSRVVAVAAGDGHSIALCAD-----GTVWT 372
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQL HG D+ P V G + ++AG HS V G ++ G
Sbjct: 373 WGYNHDGQLAHGSTNDSPVPLHVRELSG----VVAVAAGALHSLAVLSDGSVWAWGYNRQ 428
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S + PV+V V ++ G+ HSL D V+ +G GQLG
Sbjct: 429 GQLGDGSLSSSAEPVRVQGL--SGVAAVSAGLNHSLARGTD---GGVWAWGGNSFGQLG- 482
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
+ + +P GL +E ISA + S A +++G L+ WG + +TS+
Sbjct: 483 -EGTTSNALVPVRVRGLSGVET--ISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNS 539
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
+ P + + G NH L + DG V G + G L + +S P+ +
Sbjct: 540 SVPVRVQGLSGVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPV-----R 594
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
V L G++ + AAG+ HS V + ++ +WG HGQLG G
Sbjct: 595 VQGLSGMETV--AAGSLHSLSVGSDGSMWSWGNNHHGQLGHG 634
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 155/363 (42%), Gaps = 48/363 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW+WG QLG S L LS V +A GG H LA+ + G V+
Sbjct: 116 SVWAWGDNNSDQLGGAPGAQSYSVPW-RLEDLSEVVAVAAGGNHSLAVRAD-----GTVW 169
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG +GQLG G ++ + PK V G + SAGW HS G ++ G+
Sbjct: 170 AWGDNFAGQLGDGNILTTRWLPKQVQGLSG----VVAASAGWAHSMVALSDGSVWAWGNN 225
Query: 154 TFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLG+G + + P +V + V +A G +SL L D ++ +GS GQ
Sbjct: 226 TSGQLGNGISVGYGALPEQVQGL--RGVMAVAAGGLYSLALRSD---GTLWAWGSNDHGQ 280
Query: 213 LG-------VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
G S R+R +S +V ++A S A+ ++G L+ WG +
Sbjct: 281 RGDGSTVYLSSSVRVRWLS-----------GVVAMAAGSAHSLAVRSDGTLWAWGANYYG 329
Query: 264 ----NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ D + P+ + A G H + L DG V G +H G L+ S
Sbjct: 330 QLGDGTRKDHDTPKRVQGLSRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDS 389
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
PL V L GV + +AAGA HS V + ++ WG+ GQLG G+ P
Sbjct: 390 PVPL-----HVRELSGV--VAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEP 442
Query: 380 KVV 382
V
Sbjct: 443 VRV 445
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 153/353 (43%), Gaps = 33/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG+ GQ G G LS + + LS V +A G AH LA+ S G +++
Sbjct: 270 LWAWGSNDHGQRGDGSTV-YLSSSV-RVRWLSGVVAMAAGSAHSLAVRSD-----GTLWA 322
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G D PK V + ++AG HS + G ++T G
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLS----RVVAVAAGDGHSIALCADGTVWTWGYNHD 378
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQL HG P+ V V +A G HSL +L D V+ +G ++GQLG
Sbjct: 379 GQLAHGSTNDSPVPLHVREL--SGVVAVAAGALHSLAVLSD---GSVWAWGYNRQGQLG- 432
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
+ S + P GL + V SA + S A +G ++ WG G +TS+
Sbjct: 433 -DGSLSSSAEPVRVQGLSGVAAV--SAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNA 489
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + G+NH L DG + GG++ G L D +S+ P+ +
Sbjct: 490 LVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPV-----R 544
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V L GV + AG HS V + ++ WG GQLG G T P V
Sbjct: 545 VQGLSGVAAV--FAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRV 595
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 138/311 (44%), Gaps = 32/311 (10%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+A G H LAL G V++WG + GQLG G P V G + +
Sbjct: 1 MAAGTDHSLALRHD-----GTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSG----VVAV 51
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SAG HS + G ++ GD GQLG G SHS PV+V V ++ G HSL
Sbjct: 52 SAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGL--SGVVAVSAGDNHSL 109
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI-EIVGISANGDRSAAL 250
L D V+ +G QLG + +S S+P L D+ E+V ++A G+ S A+
Sbjct: 110 ALRSD---GSVWAWGDNNSDQLGGAPG-AQSYSVPWR---LEDLSEVVAVAAGGNHSLAV 162
Query: 251 SAEGHLYTWGRGF-------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
A+G ++ WG F N + P+ + A+ GW H +V DG V
Sbjct: 163 RADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAW 222
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G + G L + V E+V L G V+ +AAG +S + + + WG
Sbjct: 223 GNNTSGQLGNGISVG----YGALPEQVQGLRG--VMAVAAGGLYSLALRSDGTLWAWGSN 276
Query: 364 EHGQLGLGNTC 374
+HGQ G G+T
Sbjct: 277 DHGQRGDGSTV 287
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG G + P + + LS V+ + G H LA+ + G V++
Sbjct: 520 LWAWGGNYTGQLGDGTTSNSSVP--VRVQGLSGVAAVFAGLNHSLAVRTD-----GSVWA 572
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S GQLG G + P V G + ++AG HS V G +++ G+
Sbjct: 573 WGINSFGQLGEGTTNTSFAPVRVQGLSG----METVAAGSLHSLSVGSDGSMWSWGNNHH 628
Query: 156 GQLGHGDYRSHSSPVK 171
GQLGHG +PV+
Sbjct: 629 GQLGHGLPGRSPTPVR 644
>gi|302795652|ref|XP_002979589.1| hypothetical protein SELMODRAFT_419214 [Selaginella moellendorffii]
gi|300152837|gb|EFJ19478.1| hypothetical protein SELMODRAFT_419214 [Selaginella moellendorffii]
Length = 533
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 140/366 (38%), Gaps = 106/366 (28%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W W G G G + D L PQ ++ + +ACGGAH A ++ G+V +W
Sbjct: 258 WLWPGGNAGPAWIGTMIDALLPQ-----AMDRILDMACGGAHAAA------ILDGRVATW 306
Query: 97 GRGSSGQLGHGEMVDA---LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG------CL 147
GRG G G E A + P V F GHR + ++AGWNH+ FV+ G
Sbjct: 307 GRGLIGHEGDSEKDAAAVVVLPSVVEFSGGHR--VCEVAAGWNHTAFVTGEGDGRVVKAF 364
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G G L + +SP+ + S + V +A HS L
Sbjct: 365 GLAKRGQLGSLSSEELNKVASPLAIPSLDSYTVSIVAANGDHSAAL-------------- 410
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
+G+ L+ G LY WG+ F+ S
Sbjct: 411 -----------------------------------SGNLFHLLAGSGQLYLWGKAFDDQS 435
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L F Q +LGWNH L LT + G +
Sbjct: 436 GAYVPFLGSEELKFHQVSLGWNHGLGLT----------EYKGWKN--------------- 470
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGD 386
V+ I+AG+EHSA V + WGWGEHGQLGLG+ ++ +P +VV G
Sbjct: 471 ---------TVVSISAGSEHSAAVDAAGDLYAWGWGEHGQLGLGHFSNERYPCRVVKYGQ 521
Query: 387 EFQNRD 392
++RD
Sbjct: 522 CQRSRD 527
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSS--VSMLACGGAHVLAL 82
E + +VVK ++G GQLG+ L+ SP L + SL S VS++A G H AL
Sbjct: 355 EGDGRVVK--AFGLAKRGQLGSLSSEELNKVASP--LAIPSLDSYTVSIVAANGDHSAAL 410
Query: 83 TSPSSVI---GGKVFSWGRGSSGQLGHGEMVDALYPKPVTF---------------FDGH 124
+ + G+++ WG+ Q G V L + + F + G
Sbjct: 411 SGNLFHLLAGSGQLYLWGKAFDDQ--SGAYVPFLGSEELKFHQVSLGWNHGLGLTEYKGW 468
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
+ T+ ISAG HS V +G L+ G G GQLG G + + P +V +
Sbjct: 469 KNTVVSISAGSEHSAAVDAAGDLYAWGWGEHGQLGLGHFSNERYPCRVVKY 519
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G YP + D + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNEFGQLGLGHTESKDYPSLIEALDNQE--VEFLACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL +L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-SLIEALDNQEVEFLACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKV 344
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G FGQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDY 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEALDNQEVEFLACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGNRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ H T + E++M+ G + +L
Sbjct: 346 SSEELKLETH----TSEKELIMIAGGNQSIL 372
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L D + + + + L R S+ L + +
Sbjct: 96 NMKIHSVDQGAEHMLILSSD---GKPFEYDNYSMKHL-----RFESI--------LQEKK 139
Query: 237 IVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAAL 286
I+ I+ S ALS G L+ WG R F ST+ + L + + +Q +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLAQISA 198
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ G + G + G L S P + LD +V +A G
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-----SLIEALDNQEVEFLACGGS 253
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HSA++T++ + T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGNRVTQIA--CGRWHTLA 309
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 179/401 (44%), Gaps = 50/401 (12%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG+G G+LG G L + +P + S S+ +ACGGAH L LT +VF+ G
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRAVACGGAHTLFLTETR-----RVFATGL 108
Query: 99 GSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
GQLG ++ A+ P V+ D I HISAG+ HS ++ G L+ G + GQ
Sbjct: 109 NDCGQLGVSDVKSHAMDPLEVSGLD---KDILHISAGYYHSAAITVDGELYMWGKNSSGQ 165
Query: 158 LGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
LG G R P KV + + +A G HS+ + G +V +G G G+LG
Sbjct: 166 LGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGGSGRLGH 222
Query: 216 SKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
R S P++ L I++ ++A SA G + +G G
Sbjct: 223 GHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFGERSINKMG 282
Query: 263 FNSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
F + P S+ S + +++ A G H V+T GE+ G + +G L S
Sbjct: 283 FGGVRNATTP-SIISEVPYAEGVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHS 341
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EHGQLG 369
P+ V + + V Q++ G +H+A +++N+ + TWGWG GQLG
Sbjct: 342 PVRVEGPFLES----TVSQVSCGWKHTAAISDNK-VFTWGWGGSHGTFSVDGHSSGGQLG 396
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
G+ D P +V+LG + + + CG T A+ H
Sbjct: 397 HGSDVDYARPAMVDLGKNVR----AVHISCGFNHTAAVLEH 433
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G YP + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 124/259 (47%), Gaps = 28/259 (10%)
Query: 62 NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTF 120
N+ + + CG H LAL+ GG++F+WG+ GQLG G + P+ V
Sbjct: 133 NVLQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEH 187
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
G + ISAG HS +S SG +++ G FGQLG G S P + N+ V
Sbjct: 188 LAG--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKV 245
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIV 238
+ACG HS +L +D L ++ FG+GK GQLG +++ +R + ++ +G +I
Sbjct: 246 EFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGYRVTQIA 301
Query: 239 GISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVL 292
A +S G ++++G G + T D P LP +S S+ +H
Sbjct: 302 --CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVSSSEELKLESH-- 355
Query: 293 VLTGDGEVLMLGGSHHGML 311
T + E++M+ G + +L
Sbjct: 356 --TSEKELIMIAGGNQSIL 372
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L D + + + + L R +V L + +
Sbjct: 96 NMKIHSVDQGAEHMLILSSD---GKPFEYDNYSMKHL-----RFENV--------LQEKK 139
Query: 237 IVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAAL 286
I+ I+ S ALS G L+ WG R F ST+ + L + + +Q +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLAQISA 198
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ G + G + G L S P + LD KV +A G
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYP-----SLIEGLDNQKVEFVACGGS 253
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
HSA++T++ + T+G G+HGQLG +T +++ P +V
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV 289
>gi|115470737|ref|NP_001058967.1| Os07g0165200 [Oryza sativa Japonica Group]
gi|113610503|dbj|BAF20881.1| Os07g0165200, partial [Oryza sativa Japonica Group]
Length = 754
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 169/382 (44%), Gaps = 44/382 (11%)
Query: 3 APLMEETEKGKSA--LINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQL 60
A L E KG++ L++ + + + ++V+SWG+GT+ QLGTG H + P
Sbjct: 119 ASLALEDTKGRTPVDLLSGPVSQANGDSPDSVAMEVFSWGSGTNYQLGTGNAHIQKLPCK 178
Query: 61 LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH-----GEMVDALYP 115
++ S + +A H +A++S G++++WG G G+LGH G+ + P
Sbjct: 179 VDALHGSYIKTVAASKFHSVAVSS-----DGELYTWGFGRGGRLGHPDIHSGQTTAVITP 233
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
+ VT G R + ++A +H+ +++G LFT G GQLG+ + +P +VSS
Sbjct: 234 RQVTVGLG-RKRVNVVAAAKHHTVIATEAGELFTWGSNREGQLGYPSVDTQPTPRRVSSL 292
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ +A +HS + +V+ +GS K GQLG S +P++ L
Sbjct: 293 -KARIISVAAANKHSAAVADT---GEVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGK 348
Query: 236 EIVGISANGDRSAALSAEGHLYTWG------------RGFNSTSDVNCPQSLPSSLSFSQ 283
+SA + AL +G ++TWG R + N L
Sbjct: 349 AFKCVSAAKYHTVALGTDGEVFTWGHRLVTPRRAVISRCLKKGGNTNLKFHRMERLQVIS 408
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
A G H VLT DG + + + SDP+ + ++ ++ G V+ I+A
Sbjct: 409 VAAGVMHTTVLTADGAIF------YWVSSDPD---------LRCRQIFSMCGRNVVNISA 453
Query: 344 GAEHSAVVTENRAIMTWGWGEH 365
G +A+ T + W +H
Sbjct: 454 GKYWTALATAGGDVFMWDAKKH 475
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D + +V+ +GSG QLG I+ LP LH I ++A+ S A+S++G
Sbjct: 148 DSVAMEVFSWGSGTNYQLGTGNAHIQK--LPCKVDALHGSYIKTVAASKFHSVAVSSDGE 205
Query: 256 LYTWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
LYTWG G T+ V P+ + L + A +H ++ T GE+
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELF 265
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L P + P +VS+L ++I +AA +HSA V + + TWG
Sbjct: 266 TWGSNREGQLGYPSVDTQPTP-----RRVSSLKA-RIISVAAANKHSAAVADTGEVFTWG 319
Query: 362 WGEHGQLGLG--NTCDQIHPKVV 382
+ GQLG G N+ P++V
Sbjct: 320 SNKEGQLGYGTSNSASNCIPRMV 342
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 242 ANGDRSAALSAEGHLYTWGRGFN---STSDVNCPQSLPSSLS------FSQAALGWNHVL 292
ANGD +++ E +++WG G N T + + Q LP + A H +
Sbjct: 142 ANGDSPDSVAME--VFSWGSGTNYQLGTGNAHI-QKLPCKVDALHGSYIKTVAASKFHSV 198
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV- 351
++ DGE+ G G L P+ S + +V+ G K + + A A+H V+
Sbjct: 199 AVSSDGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIA 258
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
TE + TWG GQLG + Q P+ V+
Sbjct: 259 TEAGELFTWGSNREGQLGYPSVDTQPTPRRVS 290
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 152/357 (42%), Gaps = 32/357 (8%)
Query: 4 PLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNL 63
P + E+ K L A P+ + +V+SWG G G+LG G + Q +
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKV-- 237
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
L V G H +ALTS G+V+SWG G G+LGHG+ P V G
Sbjct: 238 --LVIVYPYHPEGKHYMALTSE-----GEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSG 290
Query: 124 HRYT--ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
+ + HI G +S ++ G LFT G G +G+LGHG +P V S + V
Sbjct: 291 KQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVI 350
Query: 182 QIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
I CG +L + D V+ +G G G+LG + P++ L +IV
Sbjct: 351 DICCGSGDAQTLAVTDD---GTVWSWGDGDYGKLG--RGGSDGCKTPKIIDRLQGQDIVR 405
Query: 240 ISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHV 291
+ S AL+ GH++TWG+G + + P+ L A+G H
Sbjct: 406 VCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHC 465
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
LV+T +GEV G + G L D + + P + LDG + IA G S
Sbjct: 466 LVMTEEGEVYGWGRNDQGQLGDSSFSTKSDP------TLMPLDGKSISGIACGPAQS 516
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 226 PQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNST---SDVN-CPQSLPSSL 279
PQ+ L D E++ ++A+ G AL++EG +Y+WG G D N C + +
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV 239
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
H + LT +GEV G G L + S P V L G V+
Sbjct: 240 IVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL-GRHVV 298
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399
I G+ +SA +T + + TWG G +G+LG G++ DQ+ P +V + R +++ C
Sbjct: 299 HIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVV---SLKGRRV-IDICC 354
Query: 400 GSG 402
GSG
Sbjct: 355 GSG 357
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 141/303 (46%), Gaps = 38/303 (12%)
Query: 36 VWSWGAGTDGQ-----LGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
V+ WG G LG ++ D+L P +L +LS + SVS+ C GA V A
Sbjct: 770 VYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRA-------- 821
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G++ +WG G +GQLGHG+ + + PK + + IT + G H+ ++ +G +++
Sbjct: 822 NGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTS--FWITQVQCGEKHTICLTKNGKVYS 879
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G +GQLG GD HSSP++VS+ NV QIA G H VL +V FG+G
Sbjct: 880 WGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVL---TTSKEVLVFGNG- 935
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
+G + VSLP + L + I + +AA++ G +YTWG G
Sbjct: 936 -AAMGAAS----VVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGG 990
Query: 270 NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML-------SDPER 316
N ++ P + S Q + G H LT G + G G L + P+R
Sbjct: 991 NSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKPKR 1050
Query: 317 VSS 319
+ S
Sbjct: 1051 IES 1053
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 52/205 (25%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI----- 89
KV+SWGA GQLG G + SP ++ +V +A G H LT+ V+
Sbjct: 876 KVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935
Query: 90 --------------------------------------GGKVFSWGRGSSGQLGHGEMVD 111
G V++WG G +LGHG
Sbjct: 936 AAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNST 993
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSSP 169
PK + +I IS G H+ F++DSG +FTCG +FGQLG GD + P
Sbjct: 994 ETSPKLIEALRNQ--SIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD---QNKP 1048
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLL 194
++ S ++CG +++ L
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVALF 1073
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSF--SQAALG 287
++V +S AA+ A G L TWG G N T++ P+ + S SF +Q G
Sbjct: 805 DVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCG 864
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H + LT +G+V G S +G L + + P+ +VS L+ V+QIA+G+ H
Sbjct: 865 EKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPM-----QVSALEKYNVLQIASGSTH 919
Query: 348 SAVVTENRAIMTWGWG 363
AV+T ++ ++ +G G
Sbjct: 920 CAVLTTSKEVLVFGNG 935
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
GF + Q + +R+ + ++P +I IS+ S+ L+ G +Y WGRG
Sbjct: 727 GFKVTAKDQSQPTPERLPNFNIP---------DICSISSGSYYSSVLTENGDVYLWGRGA 777
Query: 264 NSTSDVNC---PQSLPSSLSFS--------QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
T V PQ L F ++G+ H + +GE+L G +G L
Sbjct: 778 VKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLG 837
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ + P + + +L + Q+ G +H+ +T+N + +WG E+GQLGLG+
Sbjct: 838 HGDTNNQIEP-----KIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGD 892
Query: 373 TCDQIHPKVVNLGDEF 388
P V+ +++
Sbjct: 893 VTQHSSPMQVSALEKY 908
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L LE +S+ V+ ++ G H A V N ++TWG GE+GQLG G+T +QI PK++
Sbjct: 796 LPFKLESLSD-----VVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKII 850
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
F Q CG T ++++
Sbjct: 851 QSLTSFWITQVQ----CGEKHTICLTKN 874
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 181/412 (43%), Gaps = 56/412 (13%)
Query: 28 EEEQQVVKVWSWGAGT-DGQLGTGR---------LHDELSPQLLNLSSLSSVSMLACGGA 77
E+ + + V+ WG DG LG G + D P++L ++CG
Sbjct: 250 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 309
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
+ + +T G+++SWG S G+LGHG +PK + F+G T+ G H
Sbjct: 310 YAVLVTKQ-----GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGS--TVELADCGEFH 362
Query: 138 SGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
+ V+ SG L+ GDG G LG G SH PV++ V I+CG H+ +
Sbjct: 363 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 422
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
+ +++ FG G G LG DRI S ++P+ L+ + + SAA+
Sbjct: 423 SE---GKLFTFGDGTFGALG-HGDRI-STNIPREVEALNGCRTIKAACGVWHSAAVVSVF 477
Query: 251 ---SAEGHLYTWGRGFNST---SDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDG 298
++ G L+TWG G + D+ C + +PS + SF Q A G + + L+ G
Sbjct: 478 GEATSSGKLFTWGDGDDGRLGHGDIEC-RLIPSCVTELDTTSFQQVACGQSITVALSMSG 536
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+V +G +DP P + L V ++A G H AV+ +
Sbjct: 537 QVYAMG------TADPSHDIVRAPSCIE----GGLGKSFVQEVACGFHHIAVLNSKAEVY 586
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
TWG G +GQLG G+T + P +V Q R +V CGS +T I H
Sbjct: 587 TWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVR----KVVCGSNYTATICLH 634
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 24/333 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G P+L++ + S+V + CG H A+T+ G ++
Sbjct: 319 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTA-----SGDLY 373
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LG G A + KPV + IS G H+ FV+ G LFT G
Sbjct: 374 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 431
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFGS 207
DGTFG LGHGD S + P +V + + ACG+ HS ++ + +++ +G
Sbjct: 432 DGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGD 491
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
G G+LG R + P L ++ + ALS G +Y G S
Sbjct: 492 GDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHD 549
Query: 268 DVNCPQSLPSSL--SFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
V P + L SF Q A G++H+ VL EV G +G L + P
Sbjct: 550 IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPT- 608
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V L G +V ++ G+ ++A + ++ I
Sbjct: 609 ----LVKALKGKQVRKVVCGSNYTATICLHKPI 637
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 176/400 (44%), Gaps = 69/400 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+SWG GQ G G + SP ++ S+ +ACG +H LA+ +
Sbjct: 73 VYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPY----GL 128
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG GQLG G+ ++ P + D R T I+ G HS VS+ G L+T G G
Sbjct: 129 YSWGCNRWGQLGLGDQINRNQPTRINHSD--RATFVAIACGSQHSMIVSNFGELYTFGCG 186
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
T G+LG GD P VSS V K + G+ HS + D G ++Y FG + GQL
Sbjct: 187 TTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCV--DSTG-KIYSFGWNRYGQL 243
Query: 214 GVSKDRIRSVSLP------QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
G ++S +LP Q+T +H +++V + + ALS G + ++ GFN+
Sbjct: 244 GTGS--VKSHTLPAKMKETQITSKMHFVKVV---CGKNHTLALSNNGEMVSF--GFNACG 296
Query: 268 DV----NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS- 318
+ + Q P+ + FS+ L G+ H L +T +GE G G L E +
Sbjct: 297 QLGVGSHLDQINPTKIEFSEKVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLGLSEVYTH 356
Query: 319 STRPLSVAL---------------------------EKVSNLD---------GVKVIQIA 342
T+P + L E + N G V ++
Sbjct: 357 QTKPKLIPLVHIRHTFSDSNDAFDEIYGKGDENTTEETIENHKKYIQDKYSTGDFVEKVG 416
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
AGA +SA++T + + T+G+G+ + G DQ P ++
Sbjct: 417 AGAWNSAIITSSGKLYTFGYGDTFRTGNHEENDQDIPIII 456
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 26/319 (8%)
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
+L ++S S+ G V+SWG GQ G+G + P PV F + +I I+ G +H+
Sbjct: 60 ILEVSSNSNE-DGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHT 118
Query: 139 GFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++++ L++ G +GQLG GD + + P +++ IACG +HS+++
Sbjct: 119 LAIAENPYGLYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSN-- 176
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
G ++Y FG G G+LG+ + R P V L +IV A S+ + + G +Y
Sbjct: 177 FG-ELYTFGCGTTGRLGLGDESPR--FKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIY 233
Query: 258 T--WGR----GFNSTSDVNCPQSLP-----SSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
+ W R G S P + S + F + G NH L L+ +GE++ G +
Sbjct: 234 SFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFN 293
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L + P + + KV+ IA G HS VT+N +WG+ G
Sbjct: 294 ACGQLGVGSHLDQINPTKIEFSE-------KVLDIATGYYHSLCVTDNGEAYSWGYMSDG 346
Query: 367 QLGLGNT-CDQIHPKVVNL 384
LGL Q PK++ L
Sbjct: 347 GLGLSEVYTHQTKPKLIPL 365
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 31/248 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGG 91
K++S+G GQLGTG + P + + ++S + CG H LAL++ G
Sbjct: 231 KIYSFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSN-----NG 285
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++ S+G + GQLG G +D + P + F + + I+ G+ HS V+D+G ++ G
Sbjct: 286 EMVSFGFNACGQLGVGSHLDQINPTKIEFSE----KVLDIATGYYHSLCVTDNGEAYSWG 341
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ G LG + +H + K+ V+ +RH+ D +++YG G
Sbjct: 342 YMSDGGLGLSEVYTHQTKPKLIPLVH---------IRHTFSDSNDAF-DEIYGKGDENTT 391
Query: 212 QLGVSKDRIRSVSLPQVTIGLHD-IEIVGISANGDRSAALSAEGHLYTWGRG--FNSTSD 268
+ + + Q D +E VG A SA +++ G LYT+G G F + +
Sbjct: 392 EETIENHK----KYIQDKYSTGDFVEKVG--AGAWNSAIITSSGKLYTFGYGDTFRTGNH 445
Query: 269 VNCPQSLP 276
Q +P
Sbjct: 446 EENDQDIP 453
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++++G GT G+LG G P + +SSL +++C GA V+ + S GK++
Sbjct: 179 ELYTFGCGTTGRLGLGDESPRFKPTV--VSSLVGKQIVSC-GAGVMHSSCVDST--GKIY 233
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
S+G GQLG G + P + + + G NH+ +S++G + + G
Sbjct: 234 SFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFN 293
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + +P K+ ++ V IA G HSL + + + Y +G G L
Sbjct: 294 ACGQLGVGSHLDQINPTKIE--FSEKVLDIATGYYHSLCVTDN---GEAYSWGYMSDGGL 348
Query: 214 GVSK 217
G+S+
Sbjct: 349 GLSE 352
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 17/219 (7%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSAALSAEGH-LYTW 259
VY +G GQ G ++ V P Q +I + I I I+ + A++ + LY+W
Sbjct: 73 VYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIK-ISIKTIACGDSHTLAIAENPYGLYSW 131
Query: 260 G------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G G + N P + S +F A G H ++++ GE+ G G L
Sbjct: 132 GCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRL 191
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +P V S+L G +++ AG HS+ V I ++GW +GQLG G
Sbjct: 192 GLGDESPRFKPTVV-----SSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTG 246
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ P + + ++ ++V CG T A+S +
Sbjct: 247 SVKSHTLPAKMK-ETQITSKMHFVKVVCGKNHTLALSNN 284
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 163/380 (42%), Gaps = 54/380 (14%)
Query: 23 KIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV 69
KIE +E+ QVV VW+WG G+LG G + + P + +S L+ V
Sbjct: 263 KIEIQEKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVP--VQVSGLTEV 320
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTIT 129
S ++ H +AL S G +++WG + GQLG+ + +L PV G +
Sbjct: 321 SAISAAFGHSMALKS-----DGTLWTWGYNNRGQLGNNSITQSLV--PVQVLTG----VA 369
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC---- 185
ISAG+++S V G ++ G +GQ G+ P++VS V I+
Sbjct: 370 SISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLT--GVTSISATSSN 427
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
HSL L D V+G+G GQLG + +P +GL +V ISA +
Sbjct: 428 NYSHSLALKSDGT---VWGWGYNSTGQLG--NNSATQSLVPVQALGL--TGVVSISAGSN 480
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE 299
S AL ++G + WG G NST+ P +P S + G H + L DG
Sbjct: 481 HSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGLSGVSAISAGNYHSMALKSDGT 540
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G + G L + S P+ V S ++AG HS + + A+
Sbjct: 541 VWAWGRNSSGQLGNNSTTVSLVPIQVLTGTTS---------VSAGTYHSMALKSDGAVWG 591
Query: 360 WGWGEHGQLGLGNTCDQIHP 379
WG E+ ++ DQ+ P
Sbjct: 592 WGNNEYKKIISNTNLDQLVP 611
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 153/355 (43%), Gaps = 41/355 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL---NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
VW+WG G G LG G Q+L + L+ V ++ G H LAL S G
Sbjct: 657 VWAWGYGGSGVLGNGT-----GEQMLVGYPVRDLTGVEQISAGEGHSLALRS-----DGT 706
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++WG + G LG+ V + P V+ G ++ + AG HS + G ++ G
Sbjct: 707 AWAWGDNAYGMLGNNSTVTSSIPVQVSGLTG----VSSVKAGRLHSMALKSDGTVWAWGY 762
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLG G PV+VS ++V I+ G HS+V+ D V+ +G GQ
Sbjct: 763 NTEGQLGDGSTTQRLVPVQVSGL--EDVIAISAGDYHSMVIKSDGT---VWAWGRNSNGQ 817
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFN 264
LG + +P GL + + ISA + SAA+ ++G WG G N
Sbjct: 818 LG--NNSTTGSLVPVQVPGLTGVAL--ISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSN 873
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ S P + + +H L+L DG V G + +G + + S P
Sbjct: 874 IQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVP-- 931
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
V L V+ I+AG HS + + I WG+ +GQLG +T ++ P
Sbjct: 932 -----VQTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 160/367 (43%), Gaps = 51/367 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
VW WG + GQLG L P Q L L+ + S+S G H +AL S G +
Sbjct: 441 VWGWGYNSTGQLGNNSATQSLVPVQALGLTGVVSIS---AGSNHSMALKS-----DGTAW 492
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQLG+ +L P V G ++ ISAG HS + G ++ G +
Sbjct: 493 IWGGNSDGQLGNNSTAQSLVPVQVPGLSG----VSAISAGNYHSMALKSDGTVWAWGRNS 548
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL- 213
GQLG+ P++V + ++ G HS+ L D V+G+G+ + ++
Sbjct: 549 SGQLGNNSTTVSLVPIQVLT----GTTSVSAGTYHSMALKSD---GAVWGWGNNEYKKII 601
Query: 214 -GVSKDRIRSVS------LPQVTIGL----HDIEIVGISANGDR--SAALSAEGHLYTWG 260
+ D++ V + G +I+ + S+ G S AL ++ ++ WG
Sbjct: 602 SNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWG 661
Query: 261 RGF-----NSTSD---VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G N T + V P + Q + G H L L DG G + +GML
Sbjct: 662 YGGSGVLGNGTGEQMLVGYP--VRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLG 719
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ V+S+ P+ +VS L GV ++ AG HS + + + WG+ GQLG G+
Sbjct: 720 NNSTVTSSIPV-----QVSGLTGVSSVK--AGRLHSMALKSDGTVWAWGYNTEGQLGDGS 772
Query: 373 TCDQIHP 379
T ++ P
Sbjct: 773 TTQRLVP 779
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 155/358 (43%), Gaps = 47/358 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG GQLG + L P + L+ V+ ++ G + LA+ S G V++
Sbjct: 339 LWTWGYNNRGQLGNNSITQSLVP----VQVLTGVASISAGYDYSLAVKS-----DGTVWA 389
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA----GWNHSGFVSDSGCLFTCG 151
WGR GQ G+ +D+L P V+ G +T ISA ++HS + G ++ G
Sbjct: 390 WGRNYYGQFGNNSTIDSLVPIQVSGLTG----VTSISATSSNNYSHSLALKSDGTVWGWG 445
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG+ PV+ V I+ G HS+ L D + +G G
Sbjct: 446 YNSTGQLGNNSATQSLVPVQALGLT--GVVSISAGSNHSMALKSDGTA---WIWGGNSDG 500
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG + +P GL + ISA S AL ++G ++ WGR G NS
Sbjct: 501 QLG--NNSTAQSLVPVQVPGLSGVS--AISAGNYHSMALKSDGTVWAWGRNSSGQLGNNS 556
Query: 266 TSDVNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
T+ P Q L + S S G H + L DG V G + + + + P+
Sbjct: 557 TTVSLVPIQVLTGTTSVSA---GTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVK 613
Query: 325 VALEK-VSNL-DG-------VKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLG 371
A+ +S+ DG +K I ++G +S + ++ + WG+G G LG G
Sbjct: 614 TAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNG 671
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 128/328 (39%), Gaps = 71/328 (21%)
Query: 52 LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+D P + S+++ S + G + LAL S +V ++WG G SG LG+G
Sbjct: 623 FNDGFVPSSQEIKSIATSSGGSYG--YSLALKSDKTV-----WAWGYGGSGVLGNGTGEQ 675
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
L PV G + ISAG HS + G + GD +G LG+ + S PV+
Sbjct: 676 MLVGYPVRDLTG----VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQ 731
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
VS V + G HS+ L D V+ +G GQLG R V P G
Sbjct: 732 VSGLTG--VSSVKAGRLHSMALKSDGT---VWAWGYNTEGQLGDGSTTQRLV--PVQVSG 784
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHV 291
L D+ + ISA GD H
Sbjct: 785 LEDV--IAISA-GDY-------------------------------------------HS 798
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+V+ DG V G + +G L + S P+ +V L GV +I +AG SA V
Sbjct: 799 MVIKSDGTVWAWGRNSNGQLGNNSTTGSLVPV-----QVPGLTGVALI--SAGTNTSAAV 851
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ + WG +GQL G+ ++ P
Sbjct: 852 KSDGTALAWGSNTYGQLCDGSNIQRLIP 879
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 38 SWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+WG+ T GQL G L P Q+ + ++SM+ +H L L + G V+
Sbjct: 859 AWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMV-VANSHSLILK-----LDGTVWGC 912
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GR G +G+ + D+ P G + ISAG HS + G ++ G +G
Sbjct: 913 GRNDYGPIGNNSITDSKVPVQTLGLAG----VVSISAGLYHSMALKSDGTIWGWGYNGYG 968
Query: 157 QLGHGDYRSHSSPV 170
QLG S +PV
Sbjct: 969 QLGDNSTTSRLAPV 982
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 22/328 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG+G G+LG +E P+L+ ++ ++ GG H+ A+ G ++
Sbjct: 112 VYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKD-----GHLYC 166
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGR +S G E V P+ + D + + +S G +H+ V++ G ++T G+G
Sbjct: 167 WGRAASAGSGGTEHV--FIPRLIKG-DLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LGHG+ S P KV S K V +ACG ++ + + L Y G+ GQLG+
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEKVV-DVACGRDFTIFVCESGL----YSCGADDYGQLGL 278
Query: 216 SKDR-IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVN 270
+ R V P+ G ++V ISA AL +G +YTWG G +
Sbjct: 279 GRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKAD 338
Query: 271 CPQSLP----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
C + P + Q A G H +T DG + G G L + S +
Sbjct: 339 CSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTS 398
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+V++L V+ + G++HSAV+ ++
Sbjct: 399 PVQVTSLPAGAVLYVTLGSDHSAVLCQD 426
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 36/322 (11%)
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
GQLG G A P PV G R I +++AG + + +S G ++T G G +G+LGH
Sbjct: 69 GQLGQGHERPADRPFPVEALSGKR--IVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHN 126
Query: 162 DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
D + + P V + KN+ +++ G H + KD +Y +G G ++
Sbjct: 127 DDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKD---GHLYCWGRAASAGSGGTE---- 179
Query: 222 SVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGRGF---------NSTSDVNC 271
V +P++ G L +++ +S +AA++ +G ++TWG G+ NS
Sbjct: 180 HVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKK 239
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVAL 327
QSL + A G + + + G + G +G L S ER T P S++
Sbjct: 240 VQSLTEKV--VDVACGRDFTIFVCESG-LYSCGADDYGQLGLGRSHGERFVQT-PRSLSG 295
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
+S+ V+ I+AG H + + + TWG G GQLG G D K V D
Sbjct: 296 TGLSD-----VVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPV---DN 347
Query: 388 FQNRDTQLEVFCGSGFTYAISR 409
+N + ++V CG G T A+++
Sbjct: 348 LRNFEI-VQVACGGGHTAAVTK 368
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
L T G GQLG G R P V + K + +A G + + L VY +G
Sbjct: 60 LTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAI---SLDGDVYTWG 116
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----G 262
SG+ G+LG + D + +LP++ L IV +S G+ AA+ +GHLY WGR G
Sbjct: 117 SGEYGKLGHNDD--SNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASAG 174
Query: 263 FNSTSDVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T V P+ + L + + G +H +T GEV G + G L E+ S
Sbjct: 175 SGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQ 234
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+P +KV +L KV+ +A G + + V E+ + + G ++GQLGLG +
Sbjct: 235 YQP-----KKVQSLT-EKVVDVACGRDFTIFVCES-GLYSCGADDYGQLGLGRS 281
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 89/222 (40%), Gaps = 69/222 (31%)
Query: 35 KVWSWGAGTD-------------------------------------------------- 44
+VW+WG G +
Sbjct: 214 EVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEKVVDVACGRDFTIFVCESGLYSCGADDY 273
Query: 45 GQLGTGRLHDEL---SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
GQLG GR H E +P+ L+ + LS V ++ G HV AL G V++WG G
Sbjct: 274 GQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRD-----GLVYTWGLGRE 328
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
GQLGHGE D KPV + I ++ G H+ V+ G L+T G G GQLG G
Sbjct: 329 GQLGHGEKADCSLAKPVDNL--RNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRG 386
Query: 162 -------DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
YR +SPV+V+S V + G HS VL +D
Sbjct: 387 GELESIASYR--TSPVQVTSLPAGAVLYVTLGSDHSAVLCQD 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
FG GQLG +R P L IV ++A +AA+S +G +YTWG G
Sbjct: 63 FGLNLIGQLGQGHERPADRPFP--VEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEY 120
Query: 263 ----FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
N S+ N P+ + + + + ++G NH+ + DG + G + E
Sbjct: 121 GKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTEH 180
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
V R + LEK KVI ++ G H+A VTE + TWG G G+LG G Q
Sbjct: 181 VFIPRLIKGDLEKE------KVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQ 234
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
PK V E ++V CG FT + L S
Sbjct: 235 YQPKKVQSLTE-----KVVDVACGRDFTIFVCESGLYS 267
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 181/412 (43%), Gaps = 56/412 (13%)
Query: 28 EEEQQVVKVWSWGAGT-DGQLGTGR---------LHDELSPQLLNLSSLSSVSMLACGGA 77
E+ + + V+ WG DG LG G + D P++L ++CG
Sbjct: 247 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 306
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
+ + +T G+++SWG S G+LGHG +PK + F+G T+ G H
Sbjct: 307 YAVLVTKQ-----GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGS--TVELADCGEFH 359
Query: 138 SGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
+ V+ SG L+ GDG G LG G SH PV++ V I+CG H+ +
Sbjct: 360 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 419
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL---- 250
+ +++ FG G G LG DRI S ++P+ L+ + + SAA+
Sbjct: 420 SE---GKLFTFGDGTFGALG-HGDRI-STNIPREVEALNGCRTIKAACGVWHSAAVVSVF 474
Query: 251 ---SAEGHLYTWGRGFNST---SDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDG 298
++ G L+TWG G + D+ C + +PS + SF Q A G + + L+ G
Sbjct: 475 GEATSSGKLFTWGDGDDGRLGHGDIEC-RLIPSCVTELDTTSFQQVACGQSITVALSMSG 533
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+V +G +DP P + L V ++A G H AV+ +
Sbjct: 534 QVYAMG------TADPSHDIVRAPSCIE----GGLGKSFVQEVACGFHHIAVLNSKAEVY 583
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
TWG G +GQLG G+T + P +V Q R +V CGS +T I H
Sbjct: 584 TWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVR----KVVCGSNYTATICLH 631
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 24/333 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG + G+LG G P+L++ + S+V + CG H A+T+ G ++
Sbjct: 316 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTA-----SGDLY 370
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LG G A + KPV + IS G H+ FV+ G LFT G
Sbjct: 371 AWGDGDHNAGLLGLGS--GASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL----KDCLGNQVYGFGS 207
DGTFG LGHGD S + P +V + + ACG+ HS ++ + +++ +G
Sbjct: 429 DGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGD 488
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
G G+LG R + P L ++ + ALS G +Y G S
Sbjct: 489 GDDGRLGHGDIECRLI--PSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHD 546
Query: 268 DVNCPQSLPSSL--SFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
V P + L SF Q A G++H+ VL EV G +G L + P
Sbjct: 547 IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPT- 605
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
V L G +V ++ G+ ++A + ++ I
Sbjct: 606 ----LVKALKGKQVRKVVCGSNYTATICLHKPI 634
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 178/404 (44%), Gaps = 55/404 (13%)
Query: 34 VKVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAH--VLALTSPSSVIG 90
+ V+SWG LG G + P+++ S ++ +ACG H VL +S
Sbjct: 1013 LNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNA 1072
Query: 91 GKVFSWGRGSSGQLGH--GEMVDAL-----------------YPKPVTFFDGHRYTITHI 131
G VF++G G+SG+LG+ D L P+PV G R I I
Sbjct: 1073 GTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSI 1132
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRH 189
+ G NH+ + GC+++ G G +G LG G + +PVKV F + N+ C G RH
Sbjct: 1133 ACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKV-VFPSDNIFISKCCAGSRH 1191
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
S+ L K+ GN V+ +G G G+LG+ R+ P + E+ IS SA
Sbjct: 1192 SMALDKE--GN-VWSWGYGGNGRLGLGS--TRNYYTPNLIRIFDTYEVFQISCGDSHSAC 1246
Query: 250 LSAEGHLYTWG--RG-----FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
L G +YTWG RG SDV P + S Q A G + L L+ G++
Sbjct: 1247 LDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKI 1306
Query: 301 LMLGGS------HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G + G++S+ + V P + G K + IAAG A +
Sbjct: 1307 YQWGCTLGFNKQSEGLISNIDYVPQPVPDT----------GFKNVFIAAGPYSCAAINIF 1356
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF 398
++TWG G +LG G++ D + PK V+ DT L+V+
Sbjct: 1357 GDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVY 1400
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 164/365 (44%), Gaps = 43/365 (11%)
Query: 36 VWSWGA--GTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V++WG GT ++ P L N S S +S +ACG H LA+T + G +
Sbjct: 1443 VYTWGVNNGTGYNSTKDQIESYSEPMLFNHFS-SKISKIACGSNHSLAIT-----VNGLL 1496
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV----------SD 143
F+WG +GQLG G++ + P V + + ++ AG ++SG + D
Sbjct: 1497 FTWGCNDNGQLGQGDLRSRVIPDHVPYIEN----CINVFAGVDNSGCICSSNHEDFMKDD 1552
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
G L+ G + G+LG G+ + + +P ++++ V+++A G HS+VL +
Sbjct: 1553 YGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTG--VYKLALGTMHSVVLTHE---GS 1607
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+Y G+G G+LG V P T +++ V + A S A+S + LY WG
Sbjct: 1608 LYSAGAGTGGRLGTGDTSNYFVFTPVKT----EVKFVDVCAGSSHSLAISVDNELYGWGE 1663
Query: 262 GFNSTSD---VNCP---QSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G SD V P + +PS ++ A NH LVLT G V G + +G L
Sbjct: 1664 GKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLG 1723
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ S+ + + NLD V IA S+ T +WG +LG+G
Sbjct: 1724 VQLSIKSSANNFIKMPSTVNLDA-NVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGVGF 1782
Query: 373 TCDQI 377
T +++
Sbjct: 1783 TNNKV 1787
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 177/429 (41%), Gaps = 84/429 (19%)
Query: 36 VWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG G+LG G++ D L P ++ + + +ACG + LAL++ GK++
Sbjct: 1253 VYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSA-----SGKIY 1307
Query: 95 SWG------RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
WG + S G + + + V P P T F I+AG ++ G L
Sbjct: 1308 QWGCTLGFNKQSEGLISNIDYVPQ--PVPDTGFKN-----VFIAAGPYSCAAINIFGDLL 1360
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVN------------------------------- 177
T G GT +LGHGD + H +P VS
Sbjct: 1361 TWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHD 1420
Query: 178 -KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
K + QIA G H ++L C G VY +G +KD+I S S P + +
Sbjct: 1421 EKRIQQIAVGDGHGVLL--TCNGT-VYTWGVNNGTGYNSTKDQIESYSEPML-FNHFSSK 1476
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNST---SDVNCPQSLPSSLSFSQAALGW----- 288
I I+ + S A++ G L+TWG N D+ + +P + + + +
Sbjct: 1477 ISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRS-RVIPDHVPYIENCINVFAGVD 1535
Query: 289 --------NHVLVLTGD-GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
NH + D G + + G S G L E ++ST + +++ + GV
Sbjct: 1536 NSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTST---VMTPREITTVTGV--Y 1590
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399
++A G HS V+T ++ + G G G+LG G+T + V +F ++V
Sbjct: 1591 KLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTEVKF------VDVCA 1644
Query: 400 GSGFTYAIS 408
GS + AIS
Sbjct: 1645 GSSHSLAIS 1653
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 155/384 (40%), Gaps = 67/384 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL--------------------------------NL 63
+ +WG GT +LG G D ++P+ + N
Sbjct: 1359 LLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNA 1418
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL--YPKPVTFF 121
+ +A G H + LT G V++WG + G+ D + Y +P+ F
Sbjct: 1419 HDEKRIQQIAVGDGHGVLLTC-----NGTVYTWGVNNGT--GYNSTKDQIESYSEPM-LF 1470
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
+ I+ I+ G NHS ++ +G LFT G GQLG GD RS P V ++ ++
Sbjct: 1471 NHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHV-PYIENCIN 1529
Query: 182 QIA--------CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
A C H +KD G ++ FGS G+LG+ + +V P+ +
Sbjct: 1530 VFAGVDNSGCICSSNHE-DFMKDDYGT-LWVFGSSSCGKLGLGEALTSTVMTPREITTVT 1587
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
+ + + S L+ EG LY+ G G TS+ + + + F G
Sbjct: 1588 GVYKLALGTM--HSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTEVKFVDVCAG 1645
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG-VKVIQIAAGAE 346
+H L ++ D E+ G + + SD + V +E + + G KVI A
Sbjct: 1646 SSHSLAISVDNELYGWGEGKY-ICSDEKHVLE----PTLMEVIPSPTGEAKVISAVAAGN 1700
Query: 347 HSAVVTENRAIMTWGWGEHGQLGL 370
HS V+T + + +G +GQLG+
Sbjct: 1701 HSLVLTNSGYVAAFGNNTYGQLGV 1724
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 60/297 (20%)
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNV 180
DG ++T++H++ +++ G F LG G D + P + F + +
Sbjct: 1004 DGAKHTVSHLN--------------VYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKI 1049
Query: 181 HQIACGMRHSLVLLKDCL----GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
Q+ACG HS VL+ V+ FG G G+LG D V Q IG D
Sbjct: 1050 AQVACGDYHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQ--IGTED-- 1105
Query: 237 IVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQA----ALGWNHVL 292
D + W + PQ + S+ A A G NH L
Sbjct: 1106 -------KDEPS----------WC--------THTPQPVGLSIGLRNAIVSIACGANHTL 1140
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
V T DG V G +G+L + P+ V D + + + AG+ HS +
Sbjct: 1141 VTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPS----DNIFISKCCAGSRHSMALD 1196
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ + +WG+G +G+LGLG+T + P ++ + D ++ ++ CG + + R
Sbjct: 1197 KEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYE----VFQISCGDSHSACLDR 1249
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 154/338 (45%), Gaps = 45/338 (13%)
Query: 93 VFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
+ +WG G GQLG G +V+AL P Y + + AG +S + D
Sbjct: 7 LIAWGAGEDGQLGIGINEEKEWVCVVNALEP----------YKVRSVVAGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ + P +V + N N+ Q A G H L + + Y
Sbjct: 57 GKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQ---GRAY 113
Query: 204 GFGSGKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+G + GQ G +R R + +PQ + + ++A G S L+ EGH
Sbjct: 114 AWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCA--PKLVVRQVAAGGTHSVVLTREGH 171
Query: 256 LYTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
++TWG+ + ++ P + A+G H L L DG + G + +G L
Sbjct: 172 VWTWGQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGT 231
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ ++P+ V L G+ ++ IAAG HS +T++ + WG GEHG+LG G+
Sbjct: 232 GDTQPRSQPIPV-----QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDN 286
Query: 374 --CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL D +++ CG + A+++
Sbjct: 287 DKSSKMVPQKVNL---LAGEDI-VQLSCGGTHSVALTQ 320
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 168/400 (42%), Gaps = 54/400 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WGAG DGQLG G ++ ++N V + G + LA+ GK+F+WG
Sbjct: 9 AWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDD-----GKLFTWG 63
Query: 98 RGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + I + G H V D G + G +G
Sbjct: 64 WNQRGTLGHPAETKTENIPSQVKALN--NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSHSSPVKVSSFV--------NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
Q G R + + + V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTRE---GHVWTWG-- 176
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNS 265
Q D I+ +S+P GL ++++ + A + AL +G L+ WG G
Sbjct: 177 ---QPWPPGD-IKQISVPVRVQGLEKVKLIAVGAF--HNLALQEDGTLWAWGNNEYGQLG 230
Query: 266 TSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--DPERV 317
T D P+S P S L+ A G H LT DGEV G HG L D ++
Sbjct: 231 TGDTQ-PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 289
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC--- 374
S P +KV+ L G ++Q++ G HS +T++ + ++G G+HG+LG G
Sbjct: 290 SKMVP-----QKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTG 344
Query: 375 -------DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
D PK ++ +E + V CG T AI
Sbjct: 345 QPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAI 384
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 41/292 (14%)
Query: 35 KVWSWGAGTDGQLG--------TGRL--HDELSPQLLNLSSLSSVSMLACGGAHVLALTS 84
+ ++WG GQ G TG+ D + PQ + V +A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQ--RCAPKLVVRQVAAGGTHSVVLTR 168
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
G V++WG+ G++ P V + + I+ G H+ + +
Sbjct: 169 E-----GHVWTWGQ----PWPPGDIKQISVPVRVQGLE----KVKLIAVGAFHNLALQED 215
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G L+ G+ +GQLG GD + S P+ V + IA G HS L D +VYG
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDD---GEVYG 272
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-- 262
+G G+ G+LG + S +PQ L +IV +S G S AL+ +G ++++GRG
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDH 332
Query: 263 --------FNSTSDVNCPQSL--PSSLSFSQAALG-WNHVLVLTGDGEVLML 303
+ V P + P SLS ++ A G W LV G L +
Sbjct: 333 GRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAI 384
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLGTG P + LS L+ V +A GG H ALT G+V+
Sbjct: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHSTALTDD-----GEVY 271
Query: 95 SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGRG G+LG G+ + P+ V G I +S G HS ++ G +F+ G
Sbjct: 272 GWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE--DIVQLSCGGTHSVALTQDGRMFSFGR 329
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN--------------VHQIACGMRHSLVLLK 195
G G+LG+G + PV+V + + +ACG RH+L +++
Sbjct: 330 GDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVE 386
>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
anophagefferens]
Length = 369
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 155/360 (43%), Gaps = 62/360 (17%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRY 126
+V+ + CGG H LT+ G+V++WGRG G+LGHG+ P+ V G
Sbjct: 1 AVAAVCCGGQHAAVLTA-----AGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVG--V 53
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS------SPVKVSSFVNKNV 180
++ G+ ++ VS G L+T G G G+LG GDY H +P + +F + V
Sbjct: 54 VCAQVACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAV 113
Query: 181 HQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+I+ G H++ L+ VY +G + GQLG + + +
Sbjct: 114 REISVGPGGYHTVALVSPA---DVYTWGHNRVGQLGYTNNDV------------------ 152
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
+ NG+ + H R +S S L + GW H +LT +G
Sbjct: 153 -VPRNGEGA-------HFVPRPRRVDSVS----------GLRVRRVVAGWGHTALLTAEG 194
Query: 299 EVLMLGGSHHGMLS--DPERVSSTR---PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
+ G + G L DPE P + L +V QIA G EHS +TE
Sbjct: 195 AAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTE 254
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLP 413
+ + + G G GQLG GN ++ P+VV+ + RD LEV CG+ T + + P
Sbjct: 255 DGEVHSCGAGNKGQLGHGNVDNEQFPRVVSR-LKASRRDV-LEVACGNNGTLVLCGYFNP 312
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 130/327 (39%), Gaps = 64/327 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV-SMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G G+LG G H +P+L+ + + V + +ACG A+ A+++ G +
Sbjct: 20 EVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACGFAYTAAVSAQ-----GAL 74
Query: 94 FSWGRGSSGQLG------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
++WG G +G+LG HG D L P+P+ F G + G H+ + +
Sbjct: 75 YTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVGPGGYHTVALVSPADV 134
Query: 148 FTCGDGTFGQLGHGDYR--------SH--SSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
+T G GQLG+ + +H P +V S V ++ G H+ +L +
Sbjct: 135 YTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLTAE- 193
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
Y G +GQLG+ S P + GH Y
Sbjct: 194 --GAAYVCGRNFQGQLGLGDPE----SFPH-----------------------NERGHPY 224
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
D L + +Q A G H + LT DGEV G + G L
Sbjct: 225 --------QPDFRLLDRL-GAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVD 275
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAG 344
+ P V+ K S D V+++A G
Sbjct: 276 NEQFPRVVSRLKASRRD---VLEVACG 299
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 59 QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
+LL+ V+ +ACGG H +ALT G+V S G G+ GQLGHG + + +P+ V
Sbjct: 229 RLLDRLGAKRVAQIACGGEHSVALTE-----DGEVHSCGAGNKGQLGHGNVDNEQFPRVV 283
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ R + ++ G N G L CG
Sbjct: 284 SRLKASRRDVLEVACGNN--------GTLVLCG 308
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 176/375 (46%), Gaps = 52/375 (13%)
Query: 53 HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
D L P+ N S S VS+ A G + + G V++ GR + GQLG+G D+
Sbjct: 23 EDALFPK--NSESTSVVSINAGGYVSTILRSD------GTVWTTGRNNVGQLGNGTEKDS 74
Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
Y V Y + + + +H+ ++ G ++ G + G++ G ++ + PV++
Sbjct: 75 SYFGKVDEL----YDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEGG-KNIARPVQI 129
Query: 173 SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
+ K++ Q++ G+ HSL L D G V+ +G GQLG ++ S+P L
Sbjct: 130 NGL--KDIVQVSTGLVHSLAL--DQSG-AVWSWGENIYGQLGNGTNQ--DSSIPTKVEFL 182
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAAL 286
+I V I A + S ALS +G ++ WGR G T N P+ + + + A
Sbjct: 183 SNI--VAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAG 240
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSD------------PERVSSTRPLSVALEKVSNLD 334
G NH L L DG + G + +G + D E+ + T P+ K++ L
Sbjct: 241 GDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPV-----KLNGLY 295
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
G KV Q++AG +HS +TEN + WGW E+GQLG G+ D P N+G
Sbjct: 296 G-KVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNVGRSI------ 348
Query: 395 LEVFCGSGFTYAISR 409
+++ GS ++A+
Sbjct: 349 IDIETGSYHSFAVDE 363
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 154/358 (43%), Gaps = 53/358 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+ G GQLG G D S + L V L H LA+T G V+
Sbjct: 55 VWTTGRNNVGQLGNGTEKD--SSYFGKVDELYDVVSLDSDMDHTLAITKH-----GTVWG 107
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S G++ G A +PV +G + I +S G HS + SG +++ G+ +
Sbjct: 108 WGYNSKGEITEGGKNIA---RPVQI-NGLK-DIVQVSTGLVHSLALDQSGAVWSWGENIY 162
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G + S P KV N+ I G HSL L D +V+ +G + GQLG
Sbjct: 163 GQLGNGTNQDSSIPTKVEFL--SNIVAIEAGAEHSLALSNDG---KVWAWGRNEFGQLG- 216
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGRGFNSTSDV----- 269
++P++ L +IE++ A GD S AL +G ++ WG +NS +
Sbjct: 217 -NGETEKSNIPRLVKNLENIEMI---AGGDNHSLALDHDGAIWAWG--YNSNGQIGDGSS 270
Query: 270 -----------NCPQSLPSSLS-----FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
++ P L+ Q + G H LT +GEV G + +G L +
Sbjct: 271 NVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGN 330
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
S PL N G +I I G+ HS V E+ I WG +GQLG G
Sbjct: 331 GSMKDSKVPLR-------NNVGRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGDG 381
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KVW+WG GQLG G P+L + +L ++ M+A G H LAL G ++
Sbjct: 203 KVWAWGRNEFGQLGNGETEKSNIPRL--VKNLENIEMIAGGDNHSLALDHD-----GAIW 255
Query: 95 SWGRGSSGQLGHGEMVDALYPK------------PVTFFDGHRYTITHISAGWNHSGFVS 142
+WG S+GQ+G G +Y K PV +G + +SAG HS ++
Sbjct: 256 AWGYNSNGQIGDGS--SNVYEKDGQLREKRNKTEPVK-LNGLYGKVKQVSAGIKHSTALT 312
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
++G ++ G +GQLG+G + P++ + V +++ I G HS + + + +
Sbjct: 313 ENGEVYAWGWNEYGQLGNGSMKDSKVPLR--NNVGRSIIDIETGSYHSFAVDESGV---I 367
Query: 203 YGFGSGKRGQLG 214
Y +G GQLG
Sbjct: 368 YAWGDATYGQLG 379
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 36 VWSWGAGTDGQLGTG------------RLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
+W+WG ++GQ+G G ++ P LN V ++ G H ALT
Sbjct: 254 IWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLN-GLYGKVKQVSAGIKHSTALT 312
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
G+V++WG GQLG+G M D+ P + +I I G HS V +
Sbjct: 313 E-----NGEVYAWGWNEYGQLGNGSMKDSKVP----LRNNVGRSIIDIETGSYHSFAVDE 363
Query: 144 SGCLFTCGDGTFGQLGHGDY 163
SG ++ GD T+GQLG G +
Sbjct: 364 SGVIYAWGDATYGQLGDGTF 383
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 140/299 (46%), Gaps = 22/299 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++ WG G+LG G + P+ + ++ ++ G NH+ ++ SG +F+CG+
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
QLGH R + P KV + +I+CG H+L + Q++G+GS GQ
Sbjct: 61 NDLDQLGHKKQR--TKPEKVEGLDFYRITKISCGGNHTLAFNE---WGQLFGWGSDSHGQ 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG + + LP++ L IV IS + S AL+ G LY+WG G
Sbjct: 116 LGFNG---TTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR 172
Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
S+ +L SL + A G NH L+ G + G + +G L + + P
Sbjct: 173 SEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHP- 231
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ L ++V IA G + SA ++ + + T G G +GQLG G+T ++I P+ +
Sbjct: 232 ----TQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKI 286
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++SWG DGQLG G R E P L+ ++ +ACG H AL+ G +
Sbjct: 155 ELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSK-----SGAI 209
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG+ + GQLG + + L+P + R + +I+ G + S F+S G +FTCG G
Sbjct: 210 YGWGKNTYGQLGLNDEENKLHPTQLKTLRSIR--VKYIACGEDFSAFLSADGGVFTCGAG 267
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGHG + P K+ + V Q++CG RH+L L+ +VY FG G GQL
Sbjct: 268 MYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPS--RGRVYSFGLGGGGQL 325
Query: 214 GVSKDRIRS-VSLPQVTIG 231
G R+++ S PQV +G
Sbjct: 326 GT---RVKTNCSTPQVVLG 341
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 144/330 (43%), Gaps = 29/330 (8%)
Query: 36 VWSWGAGTDGQLGTGRL-HDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG+ G+LG G + HD++ +P S+VS + G H + LT G+V
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTK-----SGEV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
FS G QLGH + P+ V D +R IT IS G NH+ ++ G LF G
Sbjct: 56 FSCGNNDLDQLGHKKQRTK--PEKVEGLDFYR--ITKISCGGNHTLAFNEWGQLFGWGSD 111
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLG + P + S ++ QI+CG HSL L + ++Y +G GQL
Sbjct: 112 SHGQLGFNG-TTQPLPKIIKSLATFHIVQISCGKNHSLALTNN---GELYSWGGNYDGQL 167
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+ R P + L I I I+ + S ALS G +Y WG+ G N
Sbjct: 168 GLGM-RSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEE 226
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ P L + S+ A G + L+ DG V G +G L + P
Sbjct: 227 NKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILP--- 283
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
K+ L G V Q++ G H+ + +R
Sbjct: 284 --RKIMELMGSTVTQVSCGKRHTLALVPSR 311
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 24/270 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+S G QLG + P+ + ++ ++CGG H LA G++F
Sbjct: 54 EVFSCGNNDLDQLGHKK--QRTKPEKVEGLDFYRITKISCGGNHTLAFNE-----WGQLF 106
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG S GQLG P P + I IS G NHS ++++G L++ G
Sbjct: 107 GWGSDSHGQLGFNGTTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNY 163
Query: 155 FGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + P + S + + IACG HS L K +YG+G GQL
Sbjct: 164 DGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSK---SGAIYGWGKNTYGQL 220
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
G++ + + P L I + I+ D SA LSA+G ++T G G STS
Sbjct: 221 GLNDEENK--LHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTS 278
Query: 268 DVNCPQSLPSSL--SFSQAALGWNHVLVLT 295
+ P+ + + + +Q + G H L L
Sbjct: 279 NEILPRKIMELMGSTVTQVSCGKRHTLALV 308
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 138/309 (44%), Gaps = 33/309 (10%)
Query: 93 VFSWGRGSSGQL--GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
VF WGR + GQL G E L PK V+ I IS G H+ V+ G L++C
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRL--QELDIKEISCGEKHTLIVTKDGKLYSC 61
Query: 151 GDGTFGQLGHGDYRSHSSPVK----VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G +G+LGH RS + + VSS + V Q A G SLV+ +V+ +G
Sbjct: 62 GSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVI---TTAGEVFSWG 118
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
+GQLG K P++ L +V I+ + AL+ +G L++WG
Sbjct: 119 RNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQ 178
Query: 261 ------RGFNST-SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
F+ T + C + +P +Q A G NH +LT V G + G L
Sbjct: 179 LGLGSSHSFHDTPQQIVCLRGIP----IAQIASGGNHSFILTWSRAVFGWGKNSFGQLGL 234
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ + P +L KV+ I+ G +H+ +T+ + ++G G GQLG +T
Sbjct: 235 NDEYDKSHP-----TLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNST 289
Query: 374 CDQIHPKVV 382
++I PK V
Sbjct: 290 QNEILPKRV 298
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 25/278 (8%)
Query: 147 LFTCGDGTFGQL--GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+F G GQL G + S SP +VS ++ +I+CG +H+L++ KD ++Y
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKD---GKLYS 60
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTI--GLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
GS + G+LG SK R R+VS+ V + L ++++ + + S ++ G +++WGR
Sbjct: 61 CGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRN 120
Query: 262 -------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G S + P+ + S + Q G NH L LT DG + G + +G L
Sbjct: 121 DKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLG 180
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ S+ +++ L G+ + QIA+G HS ++T +RA+ WG GQLGL +
Sbjct: 181 ----LGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLND 236
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
D+ HP L +N+ + + CG T A+++
Sbjct: 237 EYDKSHP---TLCKSLRNQKV-MYISCGEDHTVALTKE 270
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE-LSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGK 92
K++S G+ G+LG + +S ++ L SSLSS+ ++ G +L ++ G+
Sbjct: 57 KLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTA---GE 113
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWGR GQLG G++ KP T+ I+ G NH ++D G LF+ G
Sbjct: 114 VFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGC 173
Query: 153 GTFGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+GQLG G S H +P ++ + QIA G HS +L V+G+G G
Sbjct: 174 NKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFIL---TWSRAVFGWGKNSFG 230
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG++ + + S P + L + +++ IS D + AL+ EG ++++G G NS
Sbjct: 231 QLGLNDEYDK--SHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS 288
Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLT 295
T + P+ + + SQ A G H + +
Sbjct: 289 TQNEILPKRVMELMGSVISQVACGRRHTVAFS 320
>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
Length = 1065
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 172/395 (43%), Gaps = 90/395 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG+ + G+L + P+++ + V +A G H A+T + G++F
Sbjct: 282 EVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAIT-----VSGELF 336
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-------TITHISAGWNHSGFVSDSGCL 147
WG G+ LG +++ Y + F H++ +++ I+ G H+ ++ SG L
Sbjct: 337 EWGEGAHS-LG---LMNDWYGRNQWF--PHKFLGPMDNISVSKIACGEWHTAIITSSGQL 390
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGN 200
FT GDGTFG LGHGD + + P +V S V +ACG H+ +++ +
Sbjct: 391 FTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSG 450
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+++ +G RG+LG + DR L
Sbjct: 451 KLFTWGDADRGKLG----------------------------HADRKMKLLP-------- 474
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP----ER 316
C SL ++ Q + G +VLT G V +G S HG L +P E
Sbjct: 475 ---------TCVDSL-TAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGES 524
Query: 317 VSSTR-PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ S PL V +I++G+ H AV+T + + TWG G GQLGLG+ +
Sbjct: 525 ICSVEGPLKTEF----------VREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSN 574
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ P +V + + RD + V CG FT AI H
Sbjct: 575 RSSPTLV---EALEGRDVE-SVVCGFNFTAAICLH 605
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 33/337 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++SWG G G+LG G D P+ ++ LACG H A+T G ++
Sbjct: 307 EIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAITQ-----SGDLY 361
Query: 95 SWGRGSSG--QLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
SWG G+ LGHG PK VT Y +++++ G H+ V+ SG LFT GD
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLY-VSYVACGPWHTAVVASSGQLFTFGD 420
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC-------LGN---QV 202
G+FG LGHGD RS S P +V V ++ACG+ H+ L++ +G+ QV
Sbjct: 421 GSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQV 480
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT---- 258
+ +G G++GQLG + + LP+ I L + I ++ + +L++ GH+YT
Sbjct: 481 FTWGDGEKGQLGHGDNDAQ--LLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMGST 538
Query: 259 -WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+G+ N T+ N P + + S + A G HV VLT E+ G +G L
Sbjct: 539 AYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHG 598
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L +V I G+ +AV+
Sbjct: 599 TIENKREPAVVGF-----LKEKQVKAITCGSNFTAVI 630
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 183/406 (45%), Gaps = 52/406 (12%)
Query: 36 VWSWGAGT-DGQL-GTGR-----LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
V+ WG DG L GTG D L P+ L + + +ACG H + +T
Sbjct: 249 VFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLVTK---- 304
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++FSWG G G+LGHG D PK ++ G + ++ G H+ ++ SG L+
Sbjct: 305 -QGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFK--SLACGDFHTCAITQSGDLY 361
Query: 149 TCGDGT--FGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+ GDGT LGHG+ S P +V+ + V +ACG H+ V+ Q++ F
Sbjct: 362 SWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVAS---SGQLFTF 418
Query: 206 GSGKRGQLGVSKDRIRSVSLP------------QVTIGL-HDIEIVGISANGDRSAALSA 252
G G G LG DR RS S+P +V G+ H +V ++ + S+
Sbjct: 419 GDGSFGALG-HGDR-RSTSVPREVKILSGLIVTKVACGVWHTAALVEVTNEASEAEVGSS 476
Query: 253 EGHLYTWGRGFNST--SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G ++TWG G N Q LP S+ + Q A G + + LT G V +G
Sbjct: 477 RGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVYTMG 536
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+ +G L +P P V + V V +IA G+ H AV+T I TWG G
Sbjct: 537 STAYGQLGNPT-AKGNFPARVEGDIVE----ASVEEIACGSYHVAVLTSKSEIYTWGKGL 591
Query: 365 HGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+GQLG G ++ P VV E Q + + CGS FT I H
Sbjct: 592 NGQLGHGTIENKREPAVVGFLKEKQVK----AITCGSNFTAVICVH 633
>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
Length = 338
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 157/340 (46%), Gaps = 34/340 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WGA ++ QLG G D SP + + +L SV ++ GGA A+ S G ++
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYSP--IPVKNLDSVIGISAGGAASFAVRSD-----GTAWA 53
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G D L P V +++ + AG +HS V G ++ G T+
Sbjct: 54 WGSNLFGQLGDGTTYDRLTPVQVQGL----HSVVALEAGSSHSLAVKADGSVWAWGWNTY 109
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G S S+PV+V +V +A G HSL + D V+ +G+ GQLG
Sbjct: 110 GQLGDGTTDSRSTPVQVEGL--DSVVAVAAGSGHSLAVKAD---GSVWAWGANWSGQLG- 163
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSD 268
++P GL +V +SA S+AL ++G ++ WG + + S+
Sbjct: 164 -DGTYTESTVPVQVTGLG--SVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASN 220
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S + + G ++ L L DG V G + G L + SS+ P+
Sbjct: 221 SPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPV----- 275
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+V+ L V+ +AAG H V + WG +GQL
Sbjct: 276 QVTRLG--SVVSVAAGPLHGLAVQSGGTVWDWGNNTYGQL 313
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 126/300 (42%), Gaps = 26/300 (8%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++WG S+ QLG G D P PV D ++ ISAG S V G + G
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYSPIPVKNLD----SVIGISAGGAASFAVRSDGTAWAWGS 56
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
FGQLG G +PV+V +V + G HSL + D V+ +G GQ
Sbjct: 57 NLFGQLGDGTTYDRLTPVQVQGL--HSVVALEAGSSHSLAVKAD---GSVWAWGWNTYGQ 111
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
LG RS P GL +V ++A S A+ A+G ++ WG ++ +
Sbjct: 112 LGDGTTDSRST--PVQVEGLD--SVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTY 167
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
++ P + S + G L DG V G + G L E +S P V
Sbjct: 168 TESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLGS-ETAASNSPSPVQ 226
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLG 385
+ ++ I++G+++S + + + WG+ GQLG G T P +V LG
Sbjct: 227 VTGMA-----SAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSSAPVQVTRLG 281
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG G + G L D P+ +V L V+ + AG+ HS V + +
Sbjct: 48 DGTAWAWGSNLFGQLGDGTTYDRLTPV-----QVQGLH--SVVALEAGSSHSLAVKADGS 100
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ WGW +GQLG G T + P + + D+ + V GSG + A+
Sbjct: 101 VWAWGWNTYGQLGDGTTDSRSTPV------QVEGLDSVVAVAAGSGHSLAV 145
>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 175/380 (46%), Gaps = 43/380 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACG H +T G++F+WG S G+LGHG D
Sbjct: 268 DVLVPKPLESNIVLDVHQIACGVRHAAFVTR-----QGEIFTWGEESGGRLGHGIGKDVF 322
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT--FGQLGHGDYRSHSSPVK 171
+P+ V ++ ++ G H+ V+ +G L+T GDGT G LGHG SH P +
Sbjct: 323 HPRLVESLTATS-SVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKR 381
Query: 172 VSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
++ + +V + CG H+ ++ +++ FG G G LG DR +V P+
Sbjct: 382 IAGCLEGLHVASVTCGPWHTALITS---YGRLFTFGDGTFGVLG-HGDR-ETVQYPREVE 436
Query: 231 GLHDIEIVGISANGDRSAAL------------SAEGHLYTWGRGFNST-----SDVNC-P 272
L + + +S +AA+ + G L+TWG G + D P
Sbjct: 437 SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKP 496
Query: 273 QSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+P+ + ++ + H L LT G+V +G + +G L + + P V +
Sbjct: 497 TCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQ-TDGKLPCLVEDKLA 555
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQN 390
S V +I+ GA H A +T + TWG G +G+LG G+ D+ KV L + ++
Sbjct: 556 SEF----VEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDR---KVPTLVEALKD 608
Query: 391 RDTQLEVFCGSGFTYAISRH 410
R + + CGS +T AI H
Sbjct: 609 RHVKY-IACGSNYTAAICLH 627
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 39/340 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG + G+LG G D P+L+ +L++ SSV +ACG H A+T + G++
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVT-----LAGEL 355
Query: 94 FSWGRGSS--GQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++WG G+ G LGHG + PK + +G + ++ G H+ ++ G LFT
Sbjct: 356 YTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEG--LHVASVTCGPWHTALITSYGRLFTF 413
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN---------Q 201
GDGTFG LGHGD + P +V S ++CG+ H+ +++ + +
Sbjct: 414 GDGTFGVLGHGDRETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGK 473
Query: 202 VYGFGSGKRGQLGV-SKD-RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT- 258
++ +G G + +LG KD R++ +P L D I+ + L+ G ++T
Sbjct: 474 LFTWGDGDKNRLGHGDKDPRLKPTCVP----ALIDYNFHKIACGHSLTVGLTTSGQVFTM 529
Query: 259 ----WGRGFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+G+ N +D P + L+ + + G HV LT EV G +G L
Sbjct: 530 GSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRL 589
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ P V L V IA G+ ++A +
Sbjct: 590 GHGDLEDRKVPTL-----VEALKDRHVKYIACGSNYTAAI 624
>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
Length = 1041
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 172/395 (43%), Gaps = 90/395 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG+ + G+L + P+++ + V +A G H A+T + G++F
Sbjct: 282 EVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAIT-----VSGELF 336
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-------TITHISAGWNHSGFVSDSGCL 147
WG G+ LG +++ Y + F H++ +++ I+ G H+ ++ SG L
Sbjct: 337 EWGEGAHS-LG---LMNDWYGRNQWF--PHKFLGPMDNISVSKIACGEWHTAIITSSGQL 390
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGN 200
FT GDGTFG LGHGD + + P +V S V +ACG H+ +++ +
Sbjct: 391 FTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSG 450
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+++ +G RG+LG + DR L
Sbjct: 451 KLFTWGDADRGKLG----------------------------HADRKMKLLP-------- 474
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP----ER 316
C SL ++ Q + G +VLT G V +G S HG L +P E
Sbjct: 475 ---------TCVDSL-TAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGES 524
Query: 317 VSSTR-PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ S PL V +I++G+ H AV+T + + TWG G GQLGLG+ +
Sbjct: 525 ICSVEGPLKTEF----------VREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSN 574
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ P +V + + RD + V CG FT AI H
Sbjct: 575 RSSPTLV---EALEGRDVE-SVVCGFNFTAAICLH 605
>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
Length = 1042
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 172/395 (43%), Gaps = 90/395 (22%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG+ + G+L + P+++ + V +A G H A+T + G++F
Sbjct: 283 EVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAIT-----VSGELF 337
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-------TITHISAGWNHSGFVSDSGCL 147
WG G+ LG +++ Y + F H++ +++ I+ G H+ ++ SG L
Sbjct: 338 EWGEGAHS-LG---LMNDWYGRNQWF--PHKFLGPMDNISVSKIACGEWHTAIITSSGQL 391
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK-------DCLGN 200
FT GDGTFG LGHGD + + P +V S V +ACG H+ +++ +
Sbjct: 392 FTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSG 451
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+++ +G RG+LG + DR L
Sbjct: 452 KLFTWGDADRGKLG----------------------------HADRKMKLLP-------- 475
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP----ER 316
C SL ++ Q + G +VLT G V +G S HG L +P E
Sbjct: 476 ---------TCVDSL-TAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGES 525
Query: 317 VSSTR-PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ S PL V +I++G+ H AV+T + + TWG G GQLGLG+ +
Sbjct: 526 ICSVEGPLKTEF----------VREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSN 575
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+ P +V + + RD + V CG FT AI H
Sbjct: 576 RSSPTLV---EALEGRDVE-SVVCGFNFTAAICLH 606
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 176/411 (42%), Gaps = 55/411 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+L+ S V +ACG AH +TS G V
Sbjct: 4484 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITS-----QGHVL 4538
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4539 TWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4598
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 4599 YGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4655
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ D +R P+ L +I+ I+ A S G ++TWG G + S
Sbjct: 4656 HGNTDHVRR---PKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVS 4712
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P+ Q+ G + V V+ G L L LS+ R + PL L
Sbjct: 4713 AIQRPR-------LVQSLQGKHIVKVICGSAHTLALSTYQ---LSEAVRPPPSPPLEYDL 4762
Query: 328 EKVSNLDGV-----------KVIQ--IAAGAEHSAVVTEN-----RAIMTWGWGEHGQLG 369
+ + V KVIQ + H V+ N R+ M G G G G
Sbjct: 4763 VRDIAPEDVLVYSIKETGFRKVIQTTMVRDKPHGPVIELNRIQVKRSRMRSGNGLAGVDG 4822
Query: 370 LGNTCDQIHPKVVNLGDE---FQNRDTQLEVF------CGSGFTYAISRHC 411
+ + Q+ K+ L E +R +++ CG GF+ +I+ C
Sbjct: 4823 MKSVFGQMVQKLPLLTQEALSMPHRVWKVKFVGESVDDCGGGFSESIAEMC 4873
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 167/387 (43%), Gaps = 35/387 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV WG QLG + P + LS L + + GG+ L + S GK+
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--AGGSKSLFIVSQD----GKL 3295
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G++G+LG G + PK V + + +G H+ ++ G +F+ G+G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + P + + K + IACG HS + ++Y +G G+ G+L
Sbjct: 3356 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3412
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW--------GRG 262
G D + P++ L D +V + A G R A L+ EG +++W GRG
Sbjct: 3413 G-HGDNCTQLK-PKLVTALADHRVVQV-ACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3469
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + + + Q G L LT GEV G + L +P
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3529
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-V 381
+ L G KVI +A GA H VT++ + WG +HGQ G GNT P V
Sbjct: 3530 -----TPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLV 3584
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ L F NR V CGS + A S
Sbjct: 3585 LGLDGIFVNR-----VACGSSHSVAWS 3606
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 27/288 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+VFSWG G G+LGHG PK + G + I+ G
Sbjct: 4472 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSG--IGVIDIACG 4524
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ G + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P L + + + S AL+
Sbjct: 4585 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR 4639
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G +T V P+ + + A G H + + GEV G
Sbjct: 4640 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWG 4699
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ G L D + RP V +L G ++++ G+ H+ ++
Sbjct: 4700 DNDEGQLGDGTVSAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4742
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 166/381 (43%), Gaps = 53/381 (13%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D +P+ + L S++ V + A C G HVLALT+ G VFSWG G G+LGHG+
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTA-----TGDVFSWGNGEGGRLGHGDTSS 669
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
P + + +T + G ++S ++ +G L+T G GT+G+LGHG+ P
Sbjct: 670 KDIPTRIVALAERQ--VTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTI 727
Query: 172 VSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV----SL 225
V + V +A CG HSL + + VY +G G G+LG SV L
Sbjct: 728 VQVLKQQRVIHVALGCGDAHSLCVTDTGI---VYAWGDGDFGKLGNGTCNGSSVPVAIEL 784
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS---------TSDVNCPQSLP 276
PQ + G V + + S AL +G +Y+WG+G T+ Q+L
Sbjct: 785 PQCSDG-----AVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALE 839
Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
+ A+G H L LT GE+ G + L P TR V L ++ +
Sbjct: 840 GK-NIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP---CVTRDPIVLLPILTTPPTL 895
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE-FQNRDTQL 395
++ +AAG S V W LG+ P VV+L + F+ D L
Sbjct: 896 RIAGMAAGGAQSIV-----------WCHSSTLGIPVKI----PFVVDLSEHTFRLLDQLL 940
Query: 396 EVFCGS-GFTYAISRHCLPSQ 415
+ CGS + RH PSQ
Sbjct: 941 CMVCGSQNVSNDAVRHHPPSQ 961
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 172/392 (43%), Gaps = 39/392 (9%)
Query: 36 VWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++ WG GQLG R+ + L+L L + + GG L +P GK
Sbjct: 4379 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSL--LRPIQI--AGGEQTLYAVTPD----GK 4430
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++ G G+ G+LG G P V +++G H +S G +F+ G+
Sbjct: 4431 LYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGE 4490
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ--VYGFGSGKR 210
G G+LGHG+ S+ P + + V IACG HS C+ +Q V +G G+
Sbjct: 4491 GEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSA-----CITSQGHVLTWGKGRY 4545
Query: 211 GQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------G 262
G+L G S+D+++ L + +G I+I S + ++ ++ + ++++WG G
Sbjct: 4546 GRLGHGDSEDQLQP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLG 4603
Query: 263 FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ P + S L ++ G + LT G V G + L
Sbjct: 4604 RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVR 4663
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
RP +KV+ L G K+I IA G+ H ++ + TWG + GQLG G P+
Sbjct: 4664 RP-----KKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPR 4718
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
+V Q + ++V CGS T A+S + L
Sbjct: 4719 LVQ---SLQGKHI-VKVICGSAHTLALSTYQL 4746
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G G+LG G + P + + V+ + CG ++ A+T+ G++++
Sbjct: 651 VFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITA-----AGELYT 705
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG+ G+LGHG D P V R + G HS V+D+G ++ GDG F
Sbjct: 706 WGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDF 765
Query: 156 GQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G+LG+G S PV + + ++ G S+ L +D VY +G G G+LG
Sbjct: 766 GKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRD---GTVYSWGKGHGGRLG 822
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ P+ L IV ++ AL+A G LY WGR
Sbjct: 823 HGHS--EHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGR 867
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 123/319 (38%), Gaps = 48/319 (15%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +AC + LT+ V+ S Q + D PKP+ +
Sbjct: 584 VRQVACSETSIYILTTTGQVL-----------SLQHSNCHTPDTTAPKPIEGLESVNIVQ 632
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
H ++ +G +F+ G+G G+LGHGD S P ++ + + V + CG
Sbjct: 633 LAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSS 692
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISAN-GD 245
+S + ++Y +G G G+L G S+D+ LP + L ++ ++ GD
Sbjct: 693 YSAAITA---AGELYTWGRGTYGRLGHGNSEDK----HLPTIVQVLKQQRVIHVALGCGD 745
Query: 246 -RSAALSAEGHLYTWGRG-FNSTSDVNCP-QSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
S ++ G +Y WG G F + C S+P ++ Q + DG V +
Sbjct: 746 AHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCS-----------DGAVKV 794
Query: 303 LGGSHHGM-------------LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
GSH + + + + + L+G ++ +A G H
Sbjct: 795 FSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCL 854
Query: 350 VVTENRAIMTWGWGEHGQL 368
+T + + WG + QL
Sbjct: 855 ALTASGELYGWGRNDFQQL 873
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGGK 92
++++WG GT G+LG G D+ P ++ + V L CG AH L +T G
Sbjct: 702 ELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTD-----TGI 756
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTF---FDGHRYTITHISAGWNHSGFVSDSGCLFT 149
V++WG G G+LG+G + P + DG + +G + S + G +++
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDG----AVKVFSGSHFSVALGRDGTVYS 812
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G G+LGHG +SP + + KN+ +A G+ H L L ++YG+G
Sbjct: 813 WGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTA---SGELYGWGRND 869
Query: 210 RGQL---GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
QL V++D I V LP +T + I G++A G +S
Sbjct: 870 FQQLCPPCVTRDPI--VLLPILTTP-PTLRIAGMAAGGAQS 907
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 55/419 (13%)
Query: 2 VAPLMEETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRL--------- 52
+ PL E A + +P+I EEEQ + S+G G G+LG G+
Sbjct: 139 LGPLFREL-----AATSIERPQIAFGEEEQPCGYLMSFGKGDHGKLGHGQCSHVSCQEGN 193
Query: 53 --HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV 110
+++ P ++ + + H +A+T+ G+ +WG G +LGHG
Sbjct: 194 CTENKMVPTMIAATRDVLFRKIDSLSTHSIAITAK-----GEAMAWGNGDKYRLGHGSSS 248
Query: 111 DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPV 170
P+ + F + + ++ G H+ + +SG L+ G+G+ G+LG GD SSP
Sbjct: 249 KEYTPRTIEFLS-LKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSSPT 307
Query: 171 KV--SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDR--IRSVS 224
+ +S I CG HSL L D + Y +G +GQ G + D+ I+ +
Sbjct: 308 RSNGASIAPVRFRHIFCGASHSLGLSWD---GRAYAWGKNNQGQCGHGHTNDQWTIQEIE 364
Query: 225 LPQVTIGLHDIEIVGISANG-DRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-------- 275
+ T + E V +A G + + +A G +Y+ G G+ + P L
Sbjct: 365 SFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRR 424
Query: 276 --PSSL--------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P+S+ + A GW+H L +T +G V G +G L + S P V
Sbjct: 425 LKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLV 484
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+DG KV AG EH+ +T + + T G G+ G+LG G++ + P + L
Sbjct: 485 RC-----MDGKKVKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIEL 538
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 135/338 (39%), Gaps = 41/338 (12%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPK---------PVTFFDGHRYTITHISAGWNHSGFV 141
G + S+G+G G+LGHG+ + P I + HS +
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGN 200
+ G G+G +LGHG +P + K V +ACG+ H+L L++
Sbjct: 226 TAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIES---G 282
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
++Y +G+G G+LG+ RS + + I S LS +G Y WG
Sbjct: 283 ELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWG 342
Query: 261 R------GFNSTSDVNCPQSLPSSLSFSQ---------AALGWNHVLVLTGDGEVLMLGG 305
+ G T+D Q + S + AA GW H L T G V G
Sbjct: 343 KNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGC 402
Query: 306 SHHG--------MLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ +L + +P SV AL+ +V+++A G +HS VT N
Sbjct: 403 GYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHE----EVVKVACGWDHSLAVTANGR 458
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
+ TWG G +G+LG G+ P +V D + +D +
Sbjct: 459 VYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAK 496
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 41 AGTDGQLGTGRLHDELSP---QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
AG LG G L P Q L+ + V +ACG H LA+T+ G+V++WG
Sbjct: 410 AGIPPVLGHGDCDRRLKPTSVQALD-DTHEEVVKVACGWDHSLAVTA-----NGRVYTWG 463
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
G++G+LGHG+ P V DG + + AG H+ F++ L+TCG G G+
Sbjct: 464 SGANGKLGHGDEESFDIPTLVRCMDGKK--VKDAKAGCEHTVFLTYDHELWTCGQGDSGR 521
Query: 158 LGHGDYRSHSSPVKVSSF 175
LGHGD ++ P K+ F
Sbjct: 522 LGHGDSQTRKRPTKIELF 539
>gi|357610382|gb|EHJ66951.1| putative Sergef protein [Danaus plexippus]
Length = 373
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+WSWGA + GQLG +++ P ++ LS + +ACGG H L L GK+F
Sbjct: 1 MWSWGANSHGQLGLDSTSEQIDKPTEVSTEHLSDIQQIACGGGHTLLLAE-----NGKLF 55
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G S QLG+ + V K V G + +I+ GW+ S V+D LF G +
Sbjct: 56 SCGWNSRRQLGYEQEVYTF--KRVWGLSGIHFL--NIACGWDFSCGVTDDKFLFVWGSNS 111
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG ++ PV++ N ++ G+RH+ ++ +V+ G G+ GQ
Sbjct: 112 YGQLGLPKNEFPDEVKPVRLQV----NACSVSMGLRHTAIINSK---GEVWTTGCGRHGQ 164
Query: 213 LGVSKDRI---RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH-LYTWG-------- 260
LG+ D + R +P++++ H I+ + + S+E LY WG
Sbjct: 165 LGLGHDVLKADRFQRVPKLSVISH------IACGQNHTVGWSSEEKALYVWGDNKHGQLL 218
Query: 261 -------RGFNSTS-DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
R + D++ + + LS GW +VL+ DG +L G +++G L
Sbjct: 219 LSSEKYKRIYKPEKIDIDVKRDVKKVLS------GWTNVLLWLQDGSLLTWGRNNYGQLG 272
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ + + + + + L G +V I G+EH+ + + + WGW EHG G
Sbjct: 273 -TDALFTGKIIHINLP-----GGRQVKDIVLGSEHTVCLATDNTLWAWGWNEHGNTG 323
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 147 LFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+++ G + GQLG P +VS+ ++ QIACG H+L+L ++ +++
Sbjct: 1 MWSWGANSHGQLGLDSTSEQIDKPTEVSTEHLSDIQQIACGGGHTLLLAEN---GKLFSC 57
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G R QLG ++ V + GL I + I+ D S ++ + L+ WG NS
Sbjct: 58 GWNSRRQLGYEQE----VYTFKRVWGLSGIHFLNIACGWDFSCGVTDDKFLFVWGS--NS 111
Query: 266 TSDVNCPQS------LPSSLSFS--QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+ P++ P L + ++G H ++ GEV G HG L V
Sbjct: 112 YGQLGLPKNEFPDEVKPVRLQVNACSVSMGLRHTAIINSKGEVWTTGCGRHGQLGLGHDV 171
Query: 318 SSTRPLSVALEKVSNLDGVKVI-QIAAGAEHSA-VVTENRAIMTWGWGEHGQLGL 370
+ ++ + + VI IA G H+ +E +A+ WG +HGQL L
Sbjct: 172 -------LKADRFQRVPKLSVISHIACGQNHTVGWSSEEKALYVWGDNKHGQLLL 219
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 13/184 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+ G G GQLG G HD L + + + LS +S +ACG H + +S +
Sbjct: 153 EVWTTGCGRHGQLGLG--HDVLKADRFQRVPKLSVISHIACGQNHTVGWSSEEKAL---- 206
Query: 94 FSWGRGSSGQ-LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG GQ L E +Y D R + + +GW + G L T G
Sbjct: 207 YVWGDNKHGQLLLSSEKYKRIYKPEKIDIDVKR-DVKKVLSGWTNVLLWLQDGSLLTWGR 265
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQLG D + ++ + V I G H++ L D N ++ +G + G
Sbjct: 266 NNYGQLG-TDALFTGKIIHINLPGGRQVKDIVLGSEHTVCLATD---NTLWAWGWNEHGN 321
Query: 213 LGVS 216
G S
Sbjct: 322 TGTS 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 18/179 (10%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
++ +G+ GQLG+ + P H +I I+ G + L+ G L++
Sbjct: 1 MWSWGANSHGQLGLDSTS-EQIDKPTEVSTEHLSDIQQIACGGGHTLLLAENGKLFS--C 57
Query: 262 GFNSTSDVNCPQSLP--------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G+NS + Q + S + F A GW+ +T D + + G + +G L
Sbjct: 58 GWNSRRQLGYEQEVYTFKRVWGLSGIHFLNIACGWDFSCGVTDDKFLFVWGSNSYGQLGL 117
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P+ V L+ V ++ G H+A++ + T G G HGQLGLG+
Sbjct: 118 PKNEFPDEVKPVRLQ-------VNACSVSMGLRHTAIINSKGEVWTTGCGRHGQLGLGH 169
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG G++ D + PQ++ S ++ ++ G +H +AL+ + G +
Sbjct: 56 ELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALS-----VSGNI 110
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G D +P + + + + ++ G +H+ ++ G +FT G G
Sbjct: 111 YSWGRNDFGQLGLGHTDDKDFPSLIEALENQK--VEFLACGGSHTALLTKDGLVFTFGAG 168
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH ++ P V+ V Q+ACG +H+L + D LG +V+ FGSG+ GQL
Sbjct: 169 KYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSD-LG-KVFSFGSGEEGQL 226
Query: 214 GVSKDRIRSVSLP 226
G + + LP
Sbjct: 227 GNGGTHNQLIPLP 239
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 120/239 (50%), Gaps = 24/239 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV K S + PQ+ L + +
Sbjct: 36 KNIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGK-IFDSTTAPQIVEHLSGVPL 91
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WGR G T D + P SL +L + A G
Sbjct: 92 AQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFP-SLIEALENQKVEFLACGG 150
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG V G +G L + RP V+ L G +V Q+A G +H+
Sbjct: 151 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCL-----VTKLAGNRVTQVACGRQHT 205
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD----EFQNRDTQLEVFCGSG 402
A V++ + ++G GE GQLG G T +Q+ P + L +F+NR ++ E+ +G
Sbjct: 206 LAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELKFENRTSEKELIIIAG 264
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 11/149 (7%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHR 125
++ + CG H LAL+ GG++F+WG+ GQLG G++ D+ P+ V G
Sbjct: 36 KNIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSG-- 88
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG +HS +S SG +++ G FGQLG G P + + N+ V +AC
Sbjct: 89 VPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLAC 148
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G H+ +L KD L V+ FG+GK GQLG
Sbjct: 149 GGSHTALLTKDGL---VFTFGAGKYGQLG 174
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG +EL P L+ + + V+ +ACG H LA S GKVFS
Sbjct: 162 VFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDL----GKVFS 217
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G GQLG+G + L P P+
Sbjct: 218 FGSGEEGQLGNGGTHNQLIPLPM 240
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
Q G H L L+ GE+ G + HG L + ST A + V +L GV + QI+
Sbjct: 40 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDST----TAPQIVEHLSGVPLAQIS 95
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
AG HS ++ + I +WG + GQLGLG+T D+ P ++ + +N+ + + CG
Sbjct: 96 AGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLI---EALENQKVEF-LACGGS 151
Query: 403 FTYAISR 409
T +++
Sbjct: 152 HTALLTK 158
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSSLSF 281
L + I+ I+ S ALS G L+ WG+ F+ST+ + L S +
Sbjct: 33 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHL-SGVPL 91
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGML----SDPERVSSTRPLSVALEKVSNLDGVK 337
+Q + G +H + L+ G + G + G L +D + S + L+ K
Sbjct: 92 AQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSL---------IEALENQK 142
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 397
V +A G H+A++T++ + T+G G++GQLG +T +++ P +V NR TQ V
Sbjct: 143 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVT--KLAGNRVTQ--V 198
Query: 398 FCGSGFTYA 406
CG T A
Sbjct: 199 ACGRQHTLA 207
>gi|330805668|ref|XP_003290801.1| hypothetical protein DICPUDRAFT_56953 [Dictyostelium purpureum]
gi|325079048|gb|EGC32668.1| hypothetical protein DICPUDRAFT_56953 [Dictyostelium purpureum]
Length = 920
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 165/399 (41%), Gaps = 97/399 (24%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P LN +A G AH L + S G+++S G+G++G+ G G KP
Sbjct: 59 PTFLNNQDDLYSKSVAIGLAHSLLIDSK-----GQLYSTGKGANGRTGMGNESTIFNFKP 113
Query: 118 VTF-------FDGHRYT-------------------ITHISAGWNHSGFVSDSGCLFTCG 151
V F + +RY+ + IS G HS F++++ LFT G
Sbjct: 114 VVFNNDELTEANKYRYSSSYYQPRFLNRPITGNHTKVIKISCGGAHSAFITENFELFTFG 173
Query: 152 DGTFGQLGHG----------------DYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLL 194
GQLGHG +Y S +K + + NV +ACG+ H++ L
Sbjct: 174 RNDRGQLGHGLLDQLVIPKKVNYQHYEYEESSKSIKENKLITASNVDLVACGLNHTVFSL 233
Query: 195 KD-CLGNQVYGFGSGKRGQLG-VSKDR---------IRSVSLPQVTIGLHDIEIVGISAN 243
D C VY G K QLG VSK+ I S++LP+ + I IS
Sbjct: 234 VDGC----VYSMGDNKHFQLGYVSKEDEEMEYRPRLIESLNLPKKQLEQRYTNIKSISCG 289
Query: 244 GDRSAALSAEGHLYTWGR------GFN--STSDVNCPQSL-------------------- 275
+ S + +G++YTWG GF+ T + P+ L
Sbjct: 290 SNFSVCV-KQGNIYTWGLNSVGQCGFSPKETKSITAPKLLIIYNDASTLSNEDKNQSGTN 348
Query: 276 ---PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL--SVALEKV 330
+ +F+Q + G +H L LT +GEV G S HG + +S+ S ++
Sbjct: 349 KKKKPTFTFTQVSCGNDHSLALTTNGEVFAWGESKHGQIGFATSMSTLVDFDTSTPIKVR 408
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+L + QIAAGA HS ++ + I WG ++ Q+G
Sbjct: 409 ESLSNESITQIAAGAYHSMALSRSNHIYCWGLNDYYQVG 447
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KVI+I+ G HSA +TEN + T+G + GQLG G + PK VN
Sbjct: 148 TKVIKISCGGAHSAFITENFELFTFGRNDRGQLGHGLLDQLVIPKKVN 195
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GRL + +PQ + S + ++ G AH +AL+ + G V
Sbjct: 169 ELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALS-----MSGNV 223
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G +P + D + + ++ G +H+ ++ G +FT G G
Sbjct: 224 YSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ--VEFLACGGSHTALLTTDGLVFTFGAG 281
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH ++ P V+ V QIACG RH+L + D LG +V+ FGSGK GQL
Sbjct: 282 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSD-LG-KVFSFGSGKEGQL 339
Query: 214 GVSKDRIRSVSLP 226
G + + LP
Sbjct: 340 GNGGTHNQLIPLP 352
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 24/239 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K++ QIACG HSL L K G +++ +G GQLGV + S+ PQ L + +
Sbjct: 149 KSIIQIACGDYHSLALSK---GGELFAWGQNLHGQLGVGR-LFASIPTPQAVEHLSGVPL 204
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
V ISA S ALS G++Y+WGR G T + P SL +L Q A G
Sbjct: 205 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFP-SLIETLDNQQVEFLACGG 263
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG V G +G L + RP V+ L G +V QIA G H+
Sbjct: 264 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQIACGRRHT 318
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD----EFQNRDTQLEVFCGSG 402
A V++ + ++G G+ GQLG G T +Q+ P + L +F++R + E+ +G
Sbjct: 319 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAG 377
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 38/259 (14%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
S+ +ACG H LAL+ GG++F+WG+ GQLG G + ++ P+ V G
Sbjct: 149 KSIIQIACGDYHSLALSK-----GGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSG-- 201
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G GQLG G P + + N+ V +AC
Sbjct: 202 VPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLAC 261
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G H+ +L D L V+ FG+GK GQLG +++ +R P++ L + I+
Sbjct: 262 GGSHTALLTTDGL---VFTFGAGKYGQLGHNSTQNELR----PRLVTELAGNRVTQIACG 314
Query: 244 GDRSAALSAE-GHLYTWGRGF--------NSTSDVNCPQSLPSS--LSFSQAALGWNHVL 292
+ A ++ G ++++G G + P LPS+ L F
Sbjct: 315 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESR-------- 366
Query: 293 VLTGDGEVLMLGGSHHGML 311
T D E++M+ G + +L
Sbjct: 367 --TSDKELVMIAGGNQSVL 383
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG +EL P+L+ + + V+ +ACG H LA S GKVFS
Sbjct: 275 VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL----GKVFS 330
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G GQLG+G + L P P+
Sbjct: 331 FGSGKEGQLGNGGTHNQLIPLPM 353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
Q + S Q A G H L L+ GE+ G + HG L R+ ++ P A+E +
Sbjct: 143 QCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLG-VGRLFASIPTPQAVE---H 198
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
L GV ++QI+AG HS ++ + + +WG + GQLGLG+T + P ++ D Q
Sbjct: 199 LSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ 255
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 127/257 (49%), Gaps = 25/257 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V+SWG GQLG G ++ L P + NLS+ V+ +ACG H L LTS G+
Sbjct: 119 EVFSWGHNAYGQLGNGTINHGLVPSHISTNLSN-KQVTEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ + +I+ G S V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNK-VVVNIACGQMCSMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
LG +S P V IEI + SAA + GH+Y WG RG
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHST-HTSAAKTQGGHVYMWGQCRGQSVTLPHL 347
Query: 263 --FNSTSDVNCPQSLPS 277
F+ T DV S P+
Sbjct: 348 THFSCTDDVFACFSTPA 364
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 22/286 (7%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ + ++F G SG LG G++ L P+ + + +G H + G
Sbjct: 61 TTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSG-PHIVLATTEGE 119
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+F+ G +GQLG+G P +S+ NK V ++ACG HSLVL D +V+ +
Sbjct: 120 VFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAW 176
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G GQ+G +++ +VT L + +V I+ S A+ G +Y WG
Sbjct: 177 GYNNSGQVGSGSTANQAIP-RRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + C + + + A G+ H LVLT +G+V G + +G L +
Sbjct: 236 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ + P V +EK ++I+IAA SA T+ + WG
Sbjct: 296 NQSYPTPVVVEK------DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GRL + +PQ + S + ++ G AH +AL+ + G V
Sbjct: 126 ELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALS-----MSGNV 180
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G +P + D + + ++ G +H+ ++ G +FT G G
Sbjct: 181 YSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ--VEFLACGGSHTALLTTDGLVFTFGAG 238
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH ++ P V+ V QIACG RH+L + D LG +V+ FGSGK GQL
Sbjct: 239 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSD-LG-KVFSFGSGKEGQL 296
Query: 214 GVSKDRIRSVSLP 226
G + + LP
Sbjct: 297 GNGGTHNQLIPLP 309
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 24/239 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K++ QIACG HSL L K G +++ +G GQLGV + S+ PQ L + +
Sbjct: 106 KSIIQIACGDYHSLALSK---GGELFAWGQNLHGQLGVGR-LFASIPTPQAVEHLSGVPL 161
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
V ISA S ALS G++Y+WGR G T + P SL +L Q A G
Sbjct: 162 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFP-SLIETLDNQQVEFLACGG 220
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG V G +G L + RP V+ L G +V QIA G H+
Sbjct: 221 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQIACGRRHT 275
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD----EFQNRDTQLEVFCGSG 402
A V++ + ++G G+ GQLG G T +Q+ P + L +F++R + E+ +G
Sbjct: 276 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAG 334
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 38/259 (14%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
S+ +ACG H LAL+ GG++F+WG+ GQLG G + ++ P+ V G
Sbjct: 106 KSIIQIACGDYHSLALSK-----GGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSG-- 158
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G GQLG G P + + N+ V +AC
Sbjct: 159 VPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLAC 218
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G H+ +L D L V+ FG+GK GQLG +++ +R P++ L + I+
Sbjct: 219 GGSHTALLTTDGL---VFTFGAGKYGQLGHNSTQNELR----PRLVTELAGNRVTQIACG 271
Query: 244 GDRSAALSAE-GHLYTWGRGF--------NSTSDVNCPQSLPSS--LSFSQAALGWNHVL 292
+ A ++ G ++++G G + P LPS+ L F
Sbjct: 272 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESR-------- 323
Query: 293 VLTGDGEVLMLGGSHHGML 311
T D E++M+ G + +L
Sbjct: 324 --TSDKELVMIAGGNQSVL 340
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG +EL P+L+ + + V+ +ACG H LA S GKVFS
Sbjct: 232 VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDL----GKVFS 287
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G GQLG+G + L P P+
Sbjct: 288 FGSGKEGQLGNGGTHNQLIPLPM 310
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
Q + S Q A G H L L+ GE+ G + HG L R+ ++ P A+E +
Sbjct: 100 QCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLG-VGRLFASIPTPQAVE---H 155
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
L GV ++QI+AG HS ++ + + +WG + GQLGLG+T + P ++ D Q
Sbjct: 156 LSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ 212
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 165/394 (41%), Gaps = 47/394 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSM--LACGGAHVLALTSPSSVIGG 91
V+S G G G+LG L+DE + L +L V + LACGG H L L+ G
Sbjct: 6 VYSCGHGAGGRLG---LNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRA-----G 57
Query: 92 KVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
KV+SWG S Q GHG E + P+ + + + I+AG +HS ++D +FT
Sbjct: 58 KVYSWGYNDSRQTGHGVEDLSDWEPRWIRALE--TVKVVQIAAGEDHSVALTDRSEVFTW 115
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G GQLGHGD P V K + I CG ++ + +V GFGS
Sbjct: 116 GRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGT---GKVLGFGSAAS 172
Query: 211 GQLG---VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----- 262
G+LG V +V LP L I+ + + S LS G LY+ G
Sbjct: 173 GKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQL 232
Query: 263 ---FNSTSDVNCP-----QSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
F +N P Q + F + + G +H L L+ DG V G + L
Sbjct: 233 GIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGH 292
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+ P VA+ L+ + ++AG HSA V+ I TWG GQLG G
Sbjct: 293 GGTEDTFTPKMVAM-----LEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQN 347
Query: 374 CD-------QIHPKVVNLGDEFQNRDTQLEVFCG 400
D Q P V L + + + V CG
Sbjct: 348 IDDHSADHVQRLPTRVILKGSVDSSEMAMRVGCG 381
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 19/238 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G GQLG G + D P L+ + + CG + A+T GKV
Sbjct: 111 EVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGT-----GKVL 165
Query: 95 SWGRGSSGQLGHGEM---VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+G +SG+LG+G++ + PV ++TI + G N S F+S +G L++ G
Sbjct: 166 GFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVG 225
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ------IACGMRHSLVLLKDCLGNQVYGF 205
GQLG S + + + + H+ ++CG HSL L +D + VY +
Sbjct: 226 YAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGI---VYSW 282
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
GSG LG P++ L V +SA G SAA+SA G +YTWGR F
Sbjct: 283 GSGINWALG--HGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNF 338
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 53/207 (25%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
VY G G G+LG++ +R R+ + L D+E+ ++ G + LS G +Y+W
Sbjct: 6 VYSCGHGAGGRLGLNDERARTAFTGPLGT-LQDVEVKSLACGGKHNLLLSRAGKVYSW-- 62
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
G+N + HG+ E +S
Sbjct: 63 GYNDSRQTG-------------------------------------HGV----EDLSDWE 81
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P + L+ VKV+QIAAG +HS +T+ + TWG G HGQLG G+ D P +
Sbjct: 82 P-----RWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFL 136
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAIS 408
V Q + + + CG T+AI+
Sbjct: 137 VK---GLQGKGIK-SIGCGYENTFAIT 159
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+++ V +ACGGAH +T+ G+++
Sbjct: 688 EVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITA-----SGELY 742
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G R +G + V+D C+++ GDG
Sbjct: 743 TWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGD 802
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P++V V ++ CG + S+ L VY +G G +LG
Sbjct: 803 YGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTA---SGSVYTWGKGDYHRLG 859
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
D V P+ L +++ I+ A + G +YTWG
Sbjct: 860 HGTD--DHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWG 903
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 131/286 (45%), Gaps = 31/286 (10%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL++ G+V+SWG G G+LGHG P+ + G + ++ G
Sbjct: 676 GGKHCLALSAE-----GEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKE--VVDVACG 728
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
HS ++ SG L+T G G +G+LGHGD P KV + V +ACG + L
Sbjct: 729 GAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLC 788
Query: 195 ---KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
DC V+ +G G G+LG + +P L + ++ + S AL+
Sbjct: 789 VTDDDC----VWSWGDGDYGKLG--RGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALT 842
Query: 252 AEGHLYTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLM 302
A G +YTWG+G + V P+ + ++L + A+G H + T GEV
Sbjct: 843 ASGSVYTWGKGDYHRLGHGTDDHVRRPKRV-AALQGKKVICIAVGSLHCVACTDTGEVYT 901
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G + G L D + +P VA L G K+ +++ G+ H+
Sbjct: 902 WGDNDEGQLGDGTVNAIHKPRLVA-----ALQGKKINRVSCGSAHT 942
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 33/298 (11%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+++G H +S G +++ G+G G+LGHG+ S P + S K V +ACG HS
Sbjct: 673 VNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHS 732
Query: 191 LVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLH--DIEIVGISANGDR 246
+ ++Y +G G+ G+L G S D++R P+ L + V + +
Sbjct: 733 ACITA---SGELYTWGKGRYGRLGHGDSDDQLR----PKKVEALSGWRVRCVACGSGDAQ 785
Query: 247 SAALSAEGHLYTW--------GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
+ ++ + +++W GRG + V L + + G + LT G
Sbjct: 786 TLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASG 845
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V G + L RP ++V+ L G KVI IA G+ H T+ +
Sbjct: 846 SVYTWGKGDYHRLGHGTDDHVRRP-----KRVAALQGKKVICIAVGSLHCVACTDTGEVY 900
Query: 359 TWGWGEHGQLGLGNTCDQIH-PKVV-NLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
TWG + GQLG G T + IH P++V L + NR V CGS T A S C PS
Sbjct: 901 TWGDNDEGQLGDG-TVNAIHKPRLVAALQGKKINR-----VSCGSAHTVAWST-CNPS 951
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+ G+G RGQLG + + +P + L I++VG G+++ A++A+G +Y
Sbjct: 583 ILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVG----GEQTLFAVTADGKVYAT 638
Query: 260 G------RGFNSTSDVNCPQSLPS-SLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+CP L S F + + G H L L+ +GEV G G
Sbjct: 639 GYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDG 698
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L + S RP + +L G +V+ +A G HSA +T + + TWG G +G+LG
Sbjct: 699 KLGHGNKSSCERP-----RVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLG 753
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK V ++ R V CGSG
Sbjct: 754 HGDSDDQLRPKKVEALSGWRVRC----VACGSG 782
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GRL + +PQL+ S + ++ G AH +AL+ + G +
Sbjct: 67 ELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALS-----MSGNI 121
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G +P V D + + ++ G +H+ +++ G +FT G G
Sbjct: 122 YSWGRNDLGQLGLGHTDGEEFPSLVEALDSQK--VEFLACGGSHTALLTEDGQVFTFGAG 179
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V Q+ACG RH+L + D LG +V+ FGSGK GQL
Sbjct: 180 KHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSD-LG-KVFSFGSGKEGQL 237
Query: 214 GVSKDRIRSVSLP 226
G + + LP
Sbjct: 238 GNGGTHNQLIPLP 250
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 24/239 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K++ QI CG HSL L K G +++ +G GQLG+ + S+ PQ+ L + +
Sbjct: 47 KSIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGIGR-LFASIPTPQLVEHLSGVPL 102
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
V ISA S ALS G++Y+WGR G T P SL +L + A G
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFP-SLVEALDSQKVEFLACGG 161
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG+V G HG L + RP V+ L G++V Q+A G H+
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRP-----RLVTELTGIRVTQVACGRRHT 216
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD----EFQNRDTQLEVFCGSG 402
A V++ + ++G G+ GQLG G T +Q+ P + L +F++R ++ E+ +G
Sbjct: 217 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAG 275
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 40/260 (15%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
S+ + CG H LAL+ GG++F+WG+ GQLG G + ++ P+ V G
Sbjct: 47 KSIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSG-- 99
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G GQLG G P V + ++ V +AC
Sbjct: 100 VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLAC 159
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G H+ +L +D QV+ FG+GK GQLG +++ +R P++ L I + + A
Sbjct: 160 GGSHTALLTED---GQVFTFGAGKHGQLGHNSTQNELR----PRLVTELTGIRVTQV-AC 211
Query: 244 GDRS--AALSAEGHLYTWGRGF--------NSTSDVNCPQSLPSS--LSFSQAALGWNHV 291
G R A +S G ++++G G + P LPS+ L F
Sbjct: 212 GRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESR------- 264
Query: 292 LVLTGDGEVLMLGGSHHGML 311
T + E++M+ G + +L
Sbjct: 265 ---TSEKELIMIAGGNQSIL 281
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++SWG GQLG G E P L+ V LACGG+H LT G+VF+
Sbjct: 121 IYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE-----DGQVFT 175
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G G GQLGH + L P+ VT G R +T ++ G H+ +VSD G +F+ G G
Sbjct: 176 FGAGKHGQLGHNSTQNELRPRLVTELTGIR--VTQVACGRRHTLAYVSDLGKVFSFGSGK 233
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG+G + P+ + N+++ + L+++ GNQ GK+
Sbjct: 234 EGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAG--GNQSILLWMGKKN 288
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+++GAG GQLG +EL P+L+ + V+ +ACG H LA S GKVF
Sbjct: 172 QVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDL----GKVF 227
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTF 120
S+G G GQLG+G + L P P+
Sbjct: 228 SFGSGKEGQLGNGGTHNQLIPLPMKL 253
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
++I + + LS++G + +N + + Q + S Q G H L L
Sbjct: 7 MKIHSVDQGAEHMLILSSDGKPFE----YNYSIEHARFQCILQEKSIIQITCGDYHSLAL 62
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ GE+ G + HG L R+ ++ P + V +L GV ++QI+AG HS ++ +
Sbjct: 63 SKGGELFAWGQNLHGQLGIG-RLFASIPTP---QLVEHLSGVPLVQISAGKAHSMALSMS 118
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
I +WG + GQLGLG+T + P +V D
Sbjct: 119 GNIYSWGRNDLGQLGLGHTDGEEFPSLVEALD 150
>gi|22202769|dbj|BAC07425.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|125557351|gb|EAZ02887.1| hypothetical protein OsI_25020 [Oryza sativa Indica Group]
gi|125599227|gb|EAZ38803.1| hypothetical protein OsJ_23206 [Oryza sativa Japonica Group]
Length = 1073
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 42/350 (12%)
Query: 33 VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++V+SWG+GT+ QLGTG H + P ++ S + +A H +A++S G+
Sbjct: 151 AMEVFSWGSGTNYQLGTGNAHIQKLPCKVDALHGSYIKTVAASKFHSVAVSS-----DGE 205
Query: 93 VFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
+++WG G G+LGH G+ + P+ VT G R + ++A +H+ +++G L
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLG-RKRVNVVAAAKHHTVIATEAGEL 264
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G GQLG+ + +P +VSS + +A +HS + +V+ +GS
Sbjct: 265 FTWGSNREGQLGYPSVDTQPTPRRVSSL-KARIISVAAANKHSAAVADT---GEVFTWGS 320
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------- 260
K GQLG S +P++ L +SA + AL +G ++TWG
Sbjct: 321 NKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGTDGEVFTWGHRLVTPR 380
Query: 261 -----RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
R + N L A G H VLT DG + + + SDP+
Sbjct: 381 RAVISRCLKKGGNTNLKFHRMERLQVISVAAGVMHTTVLTADGAIF------YWVSSDPD 434
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ ++ ++ G V+ I+AG +A+ T + W +H
Sbjct: 435 ---------LRCRQIFSMCGRNVVNISAGKYWTALATAGGDVFMWDAKKH 475
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D + +V+ +GSG QLG I+ LP LH I ++A+ S A+S++G
Sbjct: 148 DSVAMEVFSWGSGTNYQLGTGNAHIQK--LPCKVDALHGSYIKTVAASKFHSVAVSSDGE 205
Query: 256 LYTWGRGFN-----------STSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVL 301
LYTWG G T+ V P+ + L + A +H ++ T GE+
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIATEAGELF 265
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L P + P +VS+L ++I +AA +HSA V + + TWG
Sbjct: 266 TWGSNREGQLGYPSVDTQPTP-----RRVSSLKA-RIISVAAANKHSAAVADTGEVFTWG 319
Query: 362 WGEHGQLGLG--NTCDQIHPKVV 382
+ GQLG G N+ P++V
Sbjct: 320 SNKEGQLGYGTSNSASNCIPRMV 342
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 242 ANGDRSAALSAEGHLYTWGRGFN---STSDVNCPQSLPSSLS------FSQAALGWNHVL 292
ANGD +++ E +++WG G N T + + Q LP + A H +
Sbjct: 142 ANGDSPDSVAME--VFSWGSGTNYQLGTGNAHI-QKLPCKVDALHGSYIKTVAASKFHSV 198
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV- 351
++ DGE+ G G L P+ S + +V+ G K + + A A+H V+
Sbjct: 199 AVSSDGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNVVAAAKHHTVIA 258
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
TE + TWG GQLG + Q P+ V+
Sbjct: 259 TEAGELFTWGSNREGQLGYPSVDTQPTPRRVS 290
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 24/272 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
+V+S G GQLG G ++SP LL + SL V +L+ C H + ++S G
Sbjct: 156 QVYSCGCNNHGQLGLGS--TKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSD-----GS 208
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FS+G GQLG G + L P V H + + G H+ F+++ G +F+CG
Sbjct: 209 AFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLA--ACGQYHTIFLTEEGMVFSCGK 266
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G S + P +++ + IACG H+ V+L+D +++ FG +GQ
Sbjct: 267 NLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLED---GKLFTFGYNHQGQ 323
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG+ SVS P L ++++V IS + LS G L+++G G +
Sbjct: 324 LGLG--HTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDS 381
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTG 296
+D P +PS + S+ A G++H++ ++G
Sbjct: 382 TDRLVPVLVPSMTKKNLSEIACGFHHLVAISG 413
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 176/418 (42%), Gaps = 68/418 (16%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT 83
+ EE + V++ G G+LG +++ L+ + +A G LT
Sbjct: 30 VNEETHGEGDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLT 89
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHG----------------EMVDALYPK----PVTFFDG 123
GKV+ G S+GQL E+++ L P V+ F+G
Sbjct: 90 EE-----GKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNG 144
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + SAG +++CG GQLG G + S + V S + V
Sbjct: 145 AEHVLVVTSAGQ-----------VYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSA 193
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
+C HS+V+ D + FG GQLG+ R L + L +V ++A
Sbjct: 194 SCSYHHSVVVSSD---GSAFSFGLNDCGQLGIG---TRPNQLLPHRVELPSPHLVRLAAC 247
Query: 244 GD-RSAALSAEGHLYTWGRGFN------STSDVNCP------QSLPSSLSFSQAALGWNH 290
G + L+ EG +++ G+ N S S N P Q P+S+ A G++H
Sbjct: 248 GQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASM----IACGYSH 303
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
V+ DG++ G +H G L S + P+ +V L VKV++I+ G + V
Sbjct: 304 TCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPM-----QVETLRNVKVVKISCGTHFTCV 358
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++E+ + ++G HGQLGLG++ D++ P +V + E+ CG AIS
Sbjct: 359 LSESGELWSFGCNCHGQLGLGDSTDRLVPVLV----PSMTKKNLSEIACGFHHLVAIS 412
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 145/328 (44%), Gaps = 26/328 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V +WG G GQLG G + + V Y +T + AG +S + + G LFT G
Sbjct: 10 VLAWGSGEDGQLGMGGNEEKDWAHCVEALG--SYAVTAVVAGSRNSLAICEDGRLFTWGW 67
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G LGH ++ SSP V + + Q A G H L + + Y +G + G
Sbjct: 68 NQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN---GHAYAWGGNEYG 124
Query: 212 QLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
Q G +R R + PQ +++ ++A G S L+ EGH++TWG+ +
Sbjct: 125 QCGEEPERKEDGTRALRRDIPTPQRCA--PKLKVRQVAAGGTHSVVLTQEGHVWTWGQPW 182
Query: 264 --NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++ P + A+G H L LT DG + G + +G L + +
Sbjct: 183 PPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSH 242
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ +V L + ++ IAAG HS +T + WG GEHG+LG G D ++
Sbjct: 243 PI-----RVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFG---DDKSSRM 294
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V L E + ++V CG + A++R
Sbjct: 295 VPLKVELLAGEDIVQVSCGGTHSVALTR 322
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 166/402 (41%), Gaps = 50/402 (12%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ V +WG+G DGQLG G ++ + +V+ + G + LA+ G
Sbjct: 6 RATAVLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICE-----DG 60
Query: 92 KVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++F+WG G LGH P PV G + I GW H V D+G +
Sbjct: 61 RLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAI-GGW-HCLAVDDNGHAYAW 118
Query: 151 GDGTFGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G +GQ G R P V Q+A G HS+VL ++ V
Sbjct: 119 GGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQE---GHV 175
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR- 261
+ +G Q D I+ +S P GL + ++ + A + AL+ +G L+ WG
Sbjct: 176 WTWG-----QPWPPGD-IKQISTPVRVQGLEKVRVIAVGAF--HNLALTEDGILWAWGNN 227
Query: 262 --GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS- 312
G T D P+S P S LS A G H LT GEV G HG L
Sbjct: 228 EYGQLGTGDTQ-PRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGF 286
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++ S PL V L L G ++Q++ G HS +T + + ++G G+HG+LG G
Sbjct: 287 GDDKSSRMVPLKVEL-----LAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGR 341
Query: 373 TCDQIHPKVVNLG----DEFQNRDTQLE---VFCGSGFTYAI 407
P V++ +RD Q + V CG T AI
Sbjct: 342 KLTTGQPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAI 383
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 109 bits (273), Expect = 2e-21, Method: Composition-based stats.
Identities = 92/376 (24%), Positives = 170/376 (45%), Gaps = 42/376 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN----LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+W+WG +GQLG +P +N + + ++ A G H +AL + G
Sbjct: 40 LWTWGNNDEGQLGNS------TPAAINIPTKMGTANNWKTAAAGWGHTVALKT-----DG 88
Query: 92 KVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+++WG G GQLG+G + P+ + G I+AG H+ + + G L+
Sbjct: 89 TLWAWGYGRLGQLGNGNYNTNFNLPQQI----GTENDWQTIAAGHGHTVALKNDGTLWAW 144
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+ GQLG+G ++P K+ S + N I+ G +++ L KD ++ +G
Sbjct: 145 GNNFSGQLGNGTSFDRNTPTKIGS--DSNWLAISAGGLYTIALKKD---GTLWAWGKNTY 199
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
G LG D + + IG D + I+A D + A+ +G L+ WG+ G N
Sbjct: 200 GTLG---DGTTTNNRVPKQIGT-DTDWKTIAAGSDHTIAIKNDGSLWIWGKNTYGALGDN 255
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+T D P + + + A G ++ + + DG + G + G+ + +++S P+
Sbjct: 256 TTIDKIVPTKIGTDTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNGSKINSLIPVQ 315
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ EK + ++ G+ H+ V + ++ +WG +GQLG G + ++ P ++N
Sbjct: 316 IGTEKNWQM-------VSGGSVHTVAVKTDESLWSWGNNSYGQLGDGTSIEKNIPTLLNC 368
Query: 385 GDEFQNRDTQLEVFCG 400
+Q V C
Sbjct: 369 AGSLIVTVSQTNVRCA 384
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 21/267 (7%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
+AG++H+ V + G L+T G+ GQLG+ + + P K+ + N A G H++
Sbjct: 25 AAGYSHTVAVRNDGTLWTWGNNDEGQLGNSTPAAINIPTKMGT--ANNWKTAAAGWGHTV 82
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L D ++ +G G+ GQLG + + + +LPQ +D + I+A + AL
Sbjct: 83 ALKTD---GTLWAWGYGRLGQLG-NGNYNTNFNLPQQIGTENDWQT--IAAGHGHTVALK 136
Query: 252 AEGHLYTWGRGF-----NSTS-DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
+G L+ WG F N TS D N P + S ++ + G + + L DG + G
Sbjct: 137 NDGTLWAWGNNFSGQLGNGTSFDRNTPTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGK 196
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ +G L D ++ P + + IAAG++H+ + + ++ WG +
Sbjct: 197 NTYGTLGDGTTTNNRVPKQIGTD-------TDWKTIAAGSDHTIAIKNDGSLWIWGKNTY 249
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRD 392
G LG T D+I P + ++++ +
Sbjct: 250 GALGDNTTIDKIVPTKIGTDTDWKSAE 276
Score = 38.9 bits (89), Expect = 5.4, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ AA G++H + + DG + G + G L + + P K+ + K
Sbjct: 21 WKTAAAGYSHTVAVRNDGTLWTWGNNDEGQLGNSTPAAINIP-----TKMGTANNWKT-- 73
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
AAG H+ + + + WG+G GQLG GN
Sbjct: 74 AAAGWGHTVALKTDGTLWAWGYGRLGQLGNGN 105
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 30/309 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
V +WG G GQLG G + D V D R + + + AG +S + + G LFT G
Sbjct: 7 VLAWGAGEDGQLGLGNLQDK---DSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWG 63
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LGH + ++ S+P +V + N + Q A G H L + ++ + Y +G +
Sbjct: 64 WNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE---GRTYAWGGNEY 120
Query: 211 GQL------------GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
GQ G SK R +++PQ + + ++A G S L+ EGH++T
Sbjct: 121 GQCAEEQQTKEQQNKGESKVLHRDITIPQRCA--PRLCVRQLTAGGTHSVVLTEEGHVWT 178
Query: 259 WGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
WG+ + ++ P + + + A+G H L L GEV G + +G L +
Sbjct: 179 WGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDT 238
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG-NTCD 375
+ P+ V L G+ ++ IAAG HS +T + A+ WG GEHG+LG G +
Sbjct: 239 QPRSSPV-----PVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSS 293
Query: 376 QIHPKVVNL 384
++ P+ V+L
Sbjct: 294 KMLPQKVHL 302
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 28/179 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+WG GQLGTG SP + L+ L V +A GG H +ALT G V
Sbjct: 221 EVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVD-IAAGGWHSMALTPD-----GAV 274
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WGRG G+LG G+ + P+ V G + +S G HS + SG +F+ G
Sbjct: 275 YGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGE--PVVQVSCGGTHSVAATISGRMFSFGR 332
Query: 153 GTFGQLGHGDYRSHSSPVKVS---------SFVNKN---------VHQIACGMRHSLVL 193
G G+LG+ + PV+V + V+++ V +ACG RH+L +
Sbjct: 333 GDHGRLGYSGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTGWVVKLVACGGRHALAV 391
>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
taurus]
Length = 538
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 169/386 (43%), Gaps = 44/386 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALT--SPSSVI--G 90
+ W WG+ G EL L S + + LA A A+T P ++
Sbjct: 3 REWLWGSK-----GLSAPASELR-HCLRPSRVDAADFLAEEQAFHSAITMGEPDKMVPDS 56
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G VF++G+ + P F+ I+ +S G H+ + + LF
Sbjct: 57 GAVFTFGKTKFAE-----------NMPSKFWFKRDIPIS-LSCGDEHTAITTGNNKLFMF 104
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLG G + + P + + + V +ACG H+L+L G QVY G
Sbjct: 105 GSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLILTG---GGQVYATGGNNE 161
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG+ RS + ++ +I +SA + SAAL+ +G L+ WG G
Sbjct: 162 GQLGLGDTDERS-AFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQ 220
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ +++ P + S + G+ H +T +GE+ G G L P ++ +
Sbjct: 221 NITNICVPHQVTIGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNHKVP 280
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPKVVN 383
+ +S KVIQ+A G H+ V+TE +A+ T+G G+ GQLGLG T + PKV+
Sbjct: 281 QLVPGISE----KVIQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFTFETSEPKVIE 335
Query: 384 LGDEFQNRDTQLE-VFCGSGFTYAIS 408
+D ++ V CG T I+
Sbjct: 336 -----SVKDKKISHVCCGENHTALIT 356
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 18/225 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNL-SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++ G +GQLG G + + L++ +S + L+ G ALT G++
Sbjct: 152 QVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTE-----DGEL 206
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S GQ+G + + P VT I+ IS G+ HS FV+ G L+T G+
Sbjct: 207 FMWGDNSEGQIGLQNITNICVPHQVTI----GKPISWISCGYYHSAFVTTEGELYTFGEP 262
Query: 154 TFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G+LG +H P V +++ V Q+ACG H++VL + VY FG G+ G
Sbjct: 263 ESGKLGLPPKLLVNHKVPQLVPG-ISEKVIQVACGGGHTVVLTEKA----VYTFGLGQFG 317
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
QLG+ + S P+V + D +I + + +A ++ + ++
Sbjct: 318 QLGLGTFTFET-SEPKVIESVKDKKISHVCCGENHTALITVQFNI 361
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 180/379 (47%), Gaps = 43/379 (11%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACG H +T G+VF+WG S G+LGHG + +
Sbjct: 265 DVLLPRPLESNVVLDVHHIACGVRHASLVTRQ-----GEVFTWGEESGGRLGHGVGKNVV 319
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG--TFGQLGHGDYRSHSSPVK 171
P+ V TI ++ G HS V+ +G L+T GDG G LGHG SH P +
Sbjct: 320 QPRLVEALIS--TTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKR 377
Query: 172 VSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI 230
++ + + +ACG H+ ++ Q++ FG G G LG DR ++VS P+
Sbjct: 378 IAGPLEGLQIAFVACGPWHTALITST---GQLFTFGDGTFGVLG-HGDR-QNVSYPREVE 432
Query: 231 GLHDIEIVGISANGDRSAALS-----------AEGHLYTWGRGFNST-----SDVNCPQS 274
L + + ++ +AA+ + G L+TWG G + + +
Sbjct: 433 SLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPT 492
Query: 275 LPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
S+L +F + A G + + LT G V +G + +G L +S + + +K++
Sbjct: 493 CVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLG--SSLSDGKVPCLVGDKIA 550
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
G + +IA GA H AV+T + TWG G +G+LG G+ D+ P +V + ++R
Sbjct: 551 ---GESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALV---EALKDR 604
Query: 392 DTQLEVFCGSGFTYAISRH 410
+ + CGS ++ AI H
Sbjct: 605 HVKY-IACGSNYSAAICLH 622
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 163/361 (45%), Gaps = 39/361 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG + G+LG G + + P+L+ +++ +ACG H A+T + G+++
Sbjct: 298 EVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVT-----MAGELY 352
Query: 95 SWGRG--SSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+WG G ++G LGHG V PK + +G I ++ G H+ ++ +G LFT G
Sbjct: 353 TWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEG--LQIAFVACGPWHTALITSTGQLFTFG 410
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK--------DCLGNQVY 203
DGTFG LGHGD ++ S P +V S + +ACG+ H+ +++ +++
Sbjct: 411 DGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLF 470
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT----- 258
+G G + +LG R P L D I+ + L+ G ++T
Sbjct: 471 TWGDGDKNRLGHGDKEARLK--PTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTV 528
Query: 259 WGRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
+G+ +S SD P + + S + A G HV VLT EV G +G L +
Sbjct: 529 YGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 588
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
P AL V L V IA G+ +SA AI W + +TC
Sbjct: 589 IEDRKTP---AL--VEALKDRHVKYIACGSNYSA------AICLHKWVSGAEQSQCSTCR 637
Query: 376 Q 376
Q
Sbjct: 638 Q 638
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 146/329 (44%), Gaps = 38/329 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V +WG GQLG G L D +P ++L ++V+ +A GG H +ALTS G V
Sbjct: 108 TVLAWGTNHFGQLGDGTLIDRSAPVEVSLPPGTTVTAVAAGGVHSMALTSV-----GTVL 162
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G P G T+T ++A +HS V+ +G G
Sbjct: 163 AWGGNGVGQLGDGSTTRRTTPVEAILPSG--VTVTAVAAAESHSLAVTSAGAALAWGLNG 220
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G + S+PV V+ + V IA G HSL + +G GQLG
Sbjct: 221 TGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSV---GAALAWGYNGTGQLG 277
Query: 215 ----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------- 263
+++ SV+LP E+ + A SAAL+ G WG
Sbjct: 278 DGTTINRSTPVSVALPL------GAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNG 331
Query: 264 ---NSTSDVNCPQSLPSSLSFSQ-AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
NS+ V SLP+ + + A+ +H + + GDG L G + G L D +
Sbjct: 332 GGSNSSEAVEV--SLPTGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNP 389
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ P+ VAL G+ ++ AAG++H+
Sbjct: 390 STPVPVALPT-----GITLLTTAAGSDHT 413
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 169/409 (41%), Gaps = 43/409 (10%)
Query: 21 KPKIEEEEEEQQVVK--VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAH 78
P + + + V + +WG +GQLG G P ++L ++V+ +A G H
Sbjct: 40 SPALAQHKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFH 99
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
LALTS G V +WG GQLG G ++D P V+ G T+T ++AG HS
Sbjct: 100 SLALTS-----AGTVLAWGTNHFGQLGDGTLIDRSAPVEVSLPPG--TTVTAVAAGGVHS 152
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++ G + G GQLG G ++PV+ V +A HSL +
Sbjct: 153 MALTSVGTVLAWGGNGVGQLGDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTS--- 209
Query: 199 GNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+G GQLG +++ SV+LP T E+ I+A S A+++ G
Sbjct: 210 AGAALAWGLNGTGQLGDGSTINRSTPVSVALPLGT------EVTAIAAGRLHSLAVTSVG 263
Query: 255 HLYTWGR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
WG G +T + + P S LP + G H LT G L G +
Sbjct: 264 AALAWGYNGTGQLGDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDN 323
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L + +S+ + V+L + L + + ++H+ + + + WG G
Sbjct: 324 GFGQLGNGGGSNSSEAVEVSLPTGTTLAAIA----SRDSDHTIAIAGDGTALAWGSNIFG 379
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
QLG G T + P V L T L GS T A LP+Q
Sbjct: 380 QLGDGTTTNPSTPVPVALPTGI----TLLTTAAGSDHTLA-----LPAQ 419
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 138/313 (44%), Gaps = 29/313 (9%)
Query: 57 SPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALY 114
SP LL + +A GG H LAL+S G+VFSWG G+LGHG
Sbjct: 377 SPTLLESIQHVHIKKVAVNSGGKHCLALSSE-----GEVFSWGEAEDGKLGHGNRNSCDR 431
Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS 174
P+ + G + I+AG HS ++ +G LFT G G +G+LGHGD P V +
Sbjct: 432 PRVIESLRGKE--VVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEA 489
Query: 175 FVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232
V +ACG +L + D + V+ +G G G+LG + +PQ L
Sbjct: 490 LKGVRVIDVACGSGDAQTLCITDD---DSVWSWGDGDYGKLG--RGGSDGCKIPQKVEAL 544
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQA 284
+V + S AL+ G +YTWG+G S V P+ + + +
Sbjct: 545 IGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISI 604
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
A G H + T GEV G + G L D + RP VA L G K+ ++A G
Sbjct: 605 ATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVA-----ALQGKKINRVACG 659
Query: 345 AEHSAVVTENRAI 357
+ HS + ++ +
Sbjct: 660 SAHSLAWSTSKPV 672
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G + P+++ V +A GGAH +TS G++F
Sbjct: 409 EVFSWGEAEDGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITS-----TGELF 463
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D + PK V G R +G + ++D +++ GDG
Sbjct: 464 TWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGD 523
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P KV + + + V ++ CG + S+ L K VY +G G +LG
Sbjct: 524 YGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTK---SGCVYTWGKGDYHRLG 580
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L ++ I+ A + +G ++TWG
Sbjct: 581 HGSDDHVRR---PRKVAALQGKNVISIATGSLHCVACTDQGEVFTWG 624
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 201 QVYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYT 258
Q++G+G RGQLG V +++ + L ++++G G+++ A+ A G+
Sbjct: 309 QIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIG----GEQTLFAVYATGYGAG 364
Query: 259 WGRGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
G T V+ P L S + + A+ G H L L+ +GEV G + G L
Sbjct: 365 GRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHG 424
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
R S RP + +L G +V+ IAAG HSA +T + TWG G +G+LG G++
Sbjct: 425 NRNSCDRP-----RVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSE 479
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
DQ+ PK+V E ++V CGSG
Sbjct: 480 DQMKPKLV----EALKGVRVIDVACGSG 503
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWSWG G G+LG G PQ + V + CG +ALT G V++
Sbjct: 516 VWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTK-----SGCVYT 570
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G +LGHG P+ V G + I+ G H +D G +FT GD
Sbjct: 571 WGKGDYHRLGHGSDDHVRRPRKVAALQGK--NVISIATGSLHCVACTDQGEVFTWGDNDE 628
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GQLG G + P V++ K ++++ACG HSL
Sbjct: 629 GQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 151/377 (40%), Gaps = 76/377 (20%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYP---------KPVTFFDGHRY--------------- 126
G+++ WG GQLG E P +PV G +
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAGGRL 367
Query: 127 ---------------TITH-------ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
+I H +++G H +S G +F+ G+ G+LGHG+
Sbjct: 368 GIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRN 427
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRS 222
S P + S K V IA G HS + +++ +G G+ G+L G S+D+++
Sbjct: 428 SCDRPRVIESLRGKEVVDIAAGGAHSACITST---GELFTWGKGRYGRLGHGDSEDQMK- 483
Query: 223 VSLPQVTIGLHDIEIVGISA-NGD-RSAALSAEGHLYTWGR------GFNSTSDVNCPQS 274
P++ L + ++ ++ +GD ++ ++ + +++WG G + PQ
Sbjct: 484 ---PKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQK 540
Query: 275 LPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
+ + + + G + LT G V G + L RP KV+
Sbjct: 541 VEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRP-----RKVAA 595
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV-NLGDEFQNR 391
L G VI IA G+ H T+ + TWG + GQLG G+T P++V L + NR
Sbjct: 596 LQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINR 655
Query: 392 DTQLEVFCGSGFTYAIS 408
V CGS + A S
Sbjct: 656 -----VACGSAHSLAWS 667
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G P+L+ ++ +ACG AH LA ++ V GK+
Sbjct: 619 EVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSLAWSTSKPVNAGKL 677
>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
Length = 464
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 176/415 (42%), Gaps = 54/415 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D PQ L + + + GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + L G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLRG--CPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----S 207
FGQLG HG R P + K V +A G+RH+L V+ +G S
Sbjct: 130 FGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALATTAT---GSVFQWGTGLASS 184
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFN 264
G+R G + + P GL + V A D SA+L+ G LY WGR G
Sbjct: 185 GRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL 244
Query: 265 STSDVNCPQSLPSSLS---FSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-E 315
++ V P LP + F + GW H++ T G+V G + +G L E
Sbjct: 245 ASRAVFLP--LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLE 302
Query: 316 RVSSTRPL----SVALEKVSN--------LDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ +P+ S+A + N L G +I+ G+EH+ V ++ +WGW
Sbjct: 303 PPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRDKCC-SWGWN 359
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR---HCLPSQ 415
EHG G G + P V +R L V CG+G + A+ + H +P Q
Sbjct: 360 EHGMCGDGTESNVWTPTPVQALPPSPSR--LLLVGCGAGHSLAVCQLPAHPVPCQ 412
>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
Length = 386
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 158/353 (44%), Gaps = 33/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V +WG GQLG G + +P + + + V LA GG + + + G V S
Sbjct: 33 VRAWGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQS 92
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG ++GQLG G V +P VT G ++ +AG N S + G + GD T+
Sbjct: 93 WGGNAAGQLGDGSTVGRSFPAAVTGLSG----VSKTAAGVN-SAYAVRGGRVLAWGDNTY 147
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+G + PV V S NK V IA G H++ L +D V+ +G GQLG+
Sbjct: 148 GQLGNGTAGASPRPVAVQSL-NK-VEDIAAGCFHAIALRED---GTVWTWGRNHYGQLGL 202
Query: 216 --SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ DR +P +T ++V +SA S A +A+G + WG G ST+
Sbjct: 203 GTTTDRNTPQRVPDLT------DVVEVSAGCHHSLARTADGTVKAWGYNASGQLGNGSTA 256
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-A 326
+ P + S+ H + DG++ G + G L D VS T P+ V
Sbjct: 257 HASAPVDVAHLADVSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSRTTPVPVPG 316
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
L V+ L A G H+ V + +++ WG GQLG G T + P
Sbjct: 317 LTDVTAL--------AGGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNSSTP 361
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 129/296 (43%), Gaps = 27/296 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG GQLG G P + + LS VS A G + S +V GG+V +
Sbjct: 90 VQSWGGNAAGQLGDGSTVGRSFPAAV--TGLSGVSKTAAG------VNSAYAVRGGRVLA 141
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQLG+G P+PV ++ + I+AG H+ + + G ++T G +
Sbjct: 142 WGDNTYGQLGNGTA--GASPRPVAVQSLNK--VEDIAAGCFHAIALREDGTVWTWGRNHY 197
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G ++P +V + V +++ G HSL D V +G GQLG
Sbjct: 198 GQLGLGTTTDRNTPQRVPDLTD--VVEVSAGCHHSLARTAD---GTVKAWGYNASGQLG- 251
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDV 269
S P L D+ I A G S A+ +G L WG G ST
Sbjct: 252 -NGSTAHASAPVDVAHLADVSR--IFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSR 308
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P +P + A G+NH + + DG VL G + G L D +S+ P++
Sbjct: 309 TTPVPVPGLTDVTALAGGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNSSTPVTA 364
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 34/303 (11%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS------GFVSDSGC 146
V +WG +GQLG+G + P V + R + H++AG + ++D G
Sbjct: 33 VRAWGGNGAGQLGNGTTLAQQTPAGVRGLN--RADVRHLAAGGDSDTRSFAVALLND-GT 89
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+ + G GQLG G S P V+ V + A G+ + + G +V +G
Sbjct: 90 VQSWGGNAAGQLGDGSTVGRSFPAAVTGL--SGVSKTAAGVNSAYAVR----GGRVLAWG 143
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
GQLG + P L+ +E I+A + AL +G ++TWGR
Sbjct: 144 DNTYGQLG--NGTAGASPRPVAVQSLNKVE--DIAAGCFHAIALREDGTVWTWGRNHYGQ 199
Query: 262 -GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
G +T+D N PQ +P + + G +H L T DG V G + G L + ++
Sbjct: 200 LGLGTTTDRNTPQRVPDLTDVVEVSAGCHHSLARTADGTVKAWGYNASGQLGNGSTAHAS 259
Query: 321 RPLSVA-LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P+ VA L VS +I A HS V ++ + WGW G LG G+T + P
Sbjct: 260 APVDVAHLADVS--------RIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSRTTP 311
Query: 380 KVV 382
V
Sbjct: 312 VPV 314
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 27/259 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V +WG T GQLG G SP+ + + SL+ V +A G H +AL G V+
Sbjct: 138 RVLAWGDNTYGQLGNGTA--GASPRPVAVQSLNKVEDIAAGCFHAIALRED-----GTVW 190
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR GQLG G D P+ V + +SAG +HS + G + G
Sbjct: 191 TWGRNHYGQLGLGTTTDRNTPQRVPDLT----DVVEVSAGCHHSLARTADGTVKAWGYNA 246
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG+G S+PV V+ +V +I HS +L D Q+ +G G LG
Sbjct: 247 SGQLGNGSTAHASAPVDVAHLA--DVSRIFAAGYHSFAVLDD---GQLRAWGWNSAGHLG 301
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
R+ +P GL D+ + N + A+ A+G + WG G +T++
Sbjct: 302 DGSTVSRTTPVP--VPGLTDVTALAGGYN--HTVAVLADGSVLAWGENTLGQLGDGTTTN 357
Query: 269 VNCP-QSLPSSLSFSQAAL 286
+ P +LP ++ A+
Sbjct: 358 SSTPVTALPPGSGATRVAV 376
>gi|6912330|ref|NP_036271.1| secretion-regulating guanine nucleotide exchange factor [Homo
sapiens]
gi|38257790|sp|Q9UGK8.2|SRGEF_HUMAN RecName: Full=Secretion-regulating guanine nucleotide exchange
factor; AltName: Full=Deafness locus-associated putative
guanine nucleotide exchange factor; Short=DelGEF;
AltName: Full=Guanine nucleotide exchange factor-related
protein
gi|6434157|emb|CAB60832.1| deafness locus associated putative guanine nucleotide exchange
factor [Homo sapiens]
gi|41107524|gb|AAH65375.1| Secretion regulating guanine nucleotide exchange factor [Homo
sapiens]
gi|119588830|gb|EAW68424.1| secretion regulating guanine nucleotide exchange factor, isoform
CRA_b [Homo sapiens]
Length = 458
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 137/288 (47%), Gaps = 31/288 (10%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DGTFG 156
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH + + +P K S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 -LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVP 136
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I LH ++V I+A + A +A G ++ WG G S CP Q+L
Sbjct: 137 HGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTL 194
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L++ ++
Sbjct: 195 PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFL 251
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E KV I +G H TE + TWG ++GQLG
Sbjct: 252 PVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 166/397 (41%), Gaps = 49/397 (12%)
Query: 43 TDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
+ GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGLNKD 78
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-- 159
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQLG
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-----GKRGQLG 214
HG R P + K V IA G+RH++ + V+ +G+ G+R G
Sbjct: 137 HGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI---VFQWGTGLASCGRRLCPG 191
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDV 269
+ + P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL 251
Query: 270 NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML-------------S 312
PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 311
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ +RP + L G +++ G+EH+ + +WGW EHG G G
Sbjct: 312 QDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGT 368
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 369 EANVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401
>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
musculus]
gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
factor; AltName: Full=Deafness locus-associated putative
guanine nucleotide exchange factor; Short=DelGEF;
AltName: Full=Guanine nucleotide exchange factor-related
protein
gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
factor [Mus musculus]
gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
musculus]
gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
musculus]
Length = 464
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 176/415 (42%), Gaps = 54/415 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D PQ L + + + GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + L G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLRG--CPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----S 207
FGQLG HG R P + K V +A G+RH+L V+ +G S
Sbjct: 130 FGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALATTAT---GSVFQWGTGLASS 184
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFN 264
G+R G + + P GL + V A D SA+L+ G LY WGR G
Sbjct: 185 GRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL 244
Query: 265 STSDVNCPQSLPSSLS---FSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-E 315
++ V P LP + F + GW H++ T G+V G + +G L E
Sbjct: 245 ASRAVFLP--LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLE 302
Query: 316 RVSSTRPL----SVALEKVSN--------LDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ +P+ S+A + N L G +I+ G+EH+ V ++ +WGW
Sbjct: 303 PPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRDKCC-SWGWN 359
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR---HCLPSQ 415
EHG G G + P V +R L V CG+G + A+ + H +P Q
Sbjct: 360 EHGMCGDGTESNVWTPTPVQALPPSPSR--LLLVGCGAGHSLAVCQLPAHPVPCQ 412
>gi|426367607|ref|XP_004050820.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Gorilla gorilla gorilla]
Length = 458
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 137/288 (47%), Gaps = 31/288 (10%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DGTFG 156
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH + + +P K S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 -LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVP 136
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I LH ++V I+A + A +A G ++ WG G S CP Q+L
Sbjct: 137 HGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTL 194
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L++ ++
Sbjct: 195 PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFL 251
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E KV I +G H TE + TWG ++GQLG
Sbjct: 252 PVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 169/395 (42%), Gaps = 45/395 (11%)
Query: 43 TDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
+ GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGLNKD 78
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-- 159
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQLG
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-----GKRGQLG 214
HG R P + K V IA G+RH++ + V+ +G+ G+R G
Sbjct: 137 HGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI---VFQWGTGLASCGRRLCPG 191
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDV 269
+ + P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL 251
Query: 270 NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP---------ER 316
PQ + + ++ GW H++ T G++ G + +G L E+
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 311
Query: 317 VSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
S P S + S+L + +++ G+EH+ + +WGW EHG G G
Sbjct: 312 QDSFLPCSRPPNSMPSSLHCITGATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEA 370
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 371 NVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401
>gi|158258004|dbj|BAF84975.1| unnamed protein product [Homo sapiens]
Length = 458
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 137/288 (47%), Gaps = 31/288 (10%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DGTFG 156
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH + + +P K S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 -LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVP 136
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I LH ++V I+A + A +A G ++ WG G S CP Q+L
Sbjct: 137 HGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTL 194
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L++ ++
Sbjct: 195 PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFL 251
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E KV I +G H TE + TWG ++GQLG
Sbjct: 252 PVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 166/397 (41%), Gaps = 49/397 (12%)
Query: 43 TDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
+ GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGLNKD 78
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-- 159
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQLG
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-----GKRGQLG 214
HG R P + K V IA G+RH++ + V+ +G+ G+R G
Sbjct: 137 HGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI---VFQWGTGLASCGRRLCPG 191
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDV 269
+ + P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL 251
Query: 270 NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML-------------S 312
PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 311
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ +RP + L G +++ G+EH+ + +WGW EHG G G
Sbjct: 312 QDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGT 368
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 369 EANVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 163/363 (44%), Gaps = 47/363 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG GQLG G + SPQL+ + V +AC + A+ GK++
Sbjct: 31 QLYAWGWNNFGQLGIGNSISQYSPQLV---PIQDVLFVACKSSVSAAIDK-----SGKLY 82
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGR G LG+G++ + P V ++ G H ++ G L+T G+
Sbjct: 83 TWGRSKFGLLGNGQVENINVPSLVQCL--KHLDFKFVACGNYHMAAITTDGQLYTWGNFD 140
Query: 155 FGQLGHG-------------DYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLG 199
G+LGH +Y+ + K+ V N V Q+A G + +++L +D G
Sbjct: 141 HGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSED--G 198
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEGHLYT 258
N VY G K+G LG + + Q+ D++ IV I + D S AL ++G+++
Sbjct: 199 N-VYSVGLNKKGILGYQTKNVDEPTFKQIP----DLKNIVQIDSGTDFSVALDSDGNMFA 253
Query: 259 WGRGF------NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
WG + S S V PQ + Q + G + L+ DG + G G L
Sbjct: 254 WGSNYFGQLGTPSPSVVQTPQQIKGLPKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLG 313
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
P + P + ++ N+D +++ G H +V++N+ M G G+ GQLG G+
Sbjct: 314 TPSKQDIPTPHKIQFDQ--NID-----KVSCGQAHVGIVSKNKLYMH-GRGKEGQLGRGS 365
Query: 373 TCD 375
+
Sbjct: 366 ETE 368
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 151/343 (44%), Gaps = 45/343 (13%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++++WG + GQLG G + P+ V D + ++ + S + SG L+T G
Sbjct: 31 QLYAWGWNNFGQLGIGNSISQYSPQLVPIQD-----VLFVACKSSVSAAIDKSGKLYTWG 85
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FG LG+G + + P V + + +ACG H + D Q+Y +G+ G
Sbjct: 86 RSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACGNYHMAAITTD---GQLYTWGNFDHG 142
Query: 212 QLGVSKDRIRSVSLP-------QVTIGLHDI-EIVGIS------ANGDR-SAALSAEGHL 256
+LG S D S LP Q +G + E+V ++ A GD+ + LS +G++
Sbjct: 143 KLGHSFD--NSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNV 200
Query: 257 YTWG---RGF--NSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
Y+ G +G T +V+ P + +P + Q G + + L DG + G ++ G
Sbjct: 201 YSVGLNKKGILGYQTKNVDEPTFKQIPDLKNIVQIDSGTDFSVALDSDGNMFAWGSNYFG 260
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L P P +++ L +K Q + G + ++ + + TWG+G GQLG
Sbjct: 261 QLGTPSPSVVQTP-----QQIKGLPKIK--QFSCGEQFIGALSTDGVLYTWGFGGDGQLG 313
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
+ D P + QN D +V CG +S++ L
Sbjct: 314 TPSKQDIPTPHKIQFD---QNID---KVSCGQAHVGIVSKNKL 350
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 43/294 (14%)
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
S FV L+ G FGQLG G+ S SP V ++V +AC S + K
Sbjct: 23 SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKSSVSAAIDKS- 78
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
++Y +G K G LG ++ ++++P + L ++ ++ AA++ +G LY
Sbjct: 79 --GKLYTWGRSKFGLLG--NGQVENINVPSLVQCLKHLDFKFVACGNYHMAAITTDGQLY 134
Query: 258 TWGR--------GFNSTSDV---------------NCPQSLPSSLSFSQAALGWNHVLVL 294
TWG F++++ + P+ + + Q ALG ++L
Sbjct: 135 TWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIIL 194
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ DG V +G + G+L + + P + + N ++QI +G + S + +
Sbjct: 195 SEDGNVYSVGLNKKGILGYQTK-NVDEPTFKQIPDLKN-----IVQIDSGTDFSVALDSD 248
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ WG GQLG + P VV + + + CG F A+S
Sbjct: 249 GNMFAWGSNYFGQLGTPS------PSVVQTPQQIKGLPKIKQFSCGEQFIGALS 296
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
S+ V + WGW GQLG+GN+ Q P++V + D L V C S + AI
Sbjct: 23 SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPIQDV-------LFVACKSSVSAAI 75
Query: 408 SR 409
+
Sbjct: 76 DK 77
>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
Length = 1170
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 56/407 (13%)
Query: 28 EEEQQVVKVWSWG--------AGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHV 79
++ + V+ WG G D + D L P+ L + + V +ACG H
Sbjct: 298 DDYDALADVYIWGEIICENIKVGADKSVHFCPRADVLLPRPLESNVVLDVQHIACGVRHA 357
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T G+VF+WG S G+LGHG + + P+ V T+ ++ G HS
Sbjct: 358 SLVTRQ-----GEVFTWGEESGGRLGHGVGKNVVQPRLVEALTS--TTVDFVACGEFHSC 410
Query: 140 FVSDSGCLFTCGDGTF--GQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKD 196
V+ +G L+T GDGT G LGHG SH P ++ ++ V +ACG H+ ++
Sbjct: 411 AVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVSFVACGPWHTALITS- 469
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL-HDIEIVGISANGDRSAALSAEGH 255
G + + LG +R+++ V G+ H +V + A +S A + G
Sbjct: 470 -TGKENVSYPREVDSLLG-----LRTIA---VACGVWHTAAVVEVIAT--QSIASLSSGK 518
Query: 256 LYTWGRGF-------NSTSDVNCPQSLPSSLSFSQAALGWNHVLV--LTGDGEVLMLGGS 306
L+TWG G + S +N P +P+ + + + H L LT G V +G +
Sbjct: 519 LFTWGDGDKNRLGHGDKESRLN-PTCVPAIIDYDFKKIACGHSLTVGLTTTGRVFTMGST 577
Query: 307 HHGMLSDPERVSSTRPL---SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+G L +P+ L +ALE V +I+ GA H AV+T + TWG G
Sbjct: 578 VYGQLGNPQSDGKLPCLVGDKIALESVE--------EISCGAYHVAVLTSKNEVYTWGKG 629
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+G+LG G+ D+ P +V + ++R + + C S ++ AI H
Sbjct: 630 SNGRLGHGDLEDRKTPTLV---EALKDRHVKY-IACASNYSAAICLH 672
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G +LG G L+P + +ACG + + LT+ G+VF
Sbjct: 518 KLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDFKKIACGHSLTVGLTTT-----GRVF 572
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY-TITHISAGWNHSGFVSDSGCLFTCGDG 153
+ G GQLG+ + L P D ++ IS G H ++ ++T G G
Sbjct: 573 TMGSTVYGQLGNPQSDGKL---PCLVGDKIALESVEEISCGAYHVAVLTSKNEVYTWGKG 629
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+ G+LGHGD +P V + +++V IAC +S + CL V G
Sbjct: 630 SNGRLGHGDLEDRKTPTLVEALKDRHVKYIACASNYSAAI---CLHKWVSG 677
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 174/409 (42%), Gaps = 65/409 (15%)
Query: 39 WGAGTDGQLGTGRLHDELSPQ---LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
WG G G+LG G L +P + + LACGGAH L LT G+VF+
Sbjct: 39 WGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQS-----GRVFA 93
Query: 96 WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + P VT F + ISAG +HS V+ G LF G +
Sbjct: 94 TGLNDFGQLGIGSSTTHIVDPIEVTGFG---EKVVQISAGNHHSCAVTADGELFVWGKNS 150
Query: 155 FGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + S+P KV + V +A G HS+ + + G + +G+ G+
Sbjct: 151 SGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTE---GGEALSWGAAGAGR 207
Query: 213 LG-------VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
LG + + S P++ L ++I I+A SA + +G L+ +G+
Sbjct: 208 LGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEK 267
Query: 263 -FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH--------GMLSD 313
F ++D P + + A G H LT G++ G + + GM+
Sbjct: 268 VFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRS 327
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG---------- 363
PE + ST L + V +++ G +H+AV++ I TWGWG
Sbjct: 328 PEVLRST------------LFKLPVSKVSCGWKHTAVIS-GEDIYTWGWGGANGTFFEEG 374
Query: 364 --EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
GQLG GN D P +V LG + + V CG T AI +
Sbjct: 375 QSSGGQLGHGNDVDYFEPMMVELGRNAR----AVHVSCGFNHTGAIFEY 419
>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 972
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 37/365 (10%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+ KV S+G +GQLG +D +P+ +N + S + L G +A+ S
Sbjct: 2 KATTKVVSFGLNFNGQLGY-ECYDNKNPRSVN--APSDLISLHAGWNCSVAVNSE----- 53
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G + WG S G + ++ P P+ + + H + + G ++
Sbjct: 54 GTPYFWGTMPSKYDGKAKFLE---PSPLPAI-SIGFKLAHRRMLMAPTTTAVEDGTAYSF 109
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G+LGHG + P ++ V V QI G +HS VLL D G VY FG G
Sbjct: 110 GQGEWGKLGHGGAANEQHPKQLE--VQGKVTQIGVGDQHS-VLLTD--GGHVYTFGQGIY 164
Query: 211 GQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-----GF 263
GQLG KD R + + I +G+ D++ A++A+G +++WGR G
Sbjct: 165 GQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGF--DQTFAINADGVVHSWGRQGPWLGH 222
Query: 264 NSTSD-VNCPQS---LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS- 318
+ D V PQ L + Q A G H L+LT DG+V +G + G L + V
Sbjct: 223 AAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKK 282
Query: 319 -STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ P+ + ++L+ + Q+AAG +HS V+ + +++T+G G +G+LG G+T +Q
Sbjct: 283 ETANPMPI-----TSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQD 337
Query: 378 HPKVV 382
P+ V
Sbjct: 338 VPRTV 342
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 37/312 (11%)
Query: 59 QLLNLSSLSSVSMLACGGAHVLALTSPSS--VIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
+ L S L ++S + AH L +P++ V G +S+G+G G+LGHG + +PK
Sbjct: 71 KFLEPSPLPAIS-IGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLGHGGAANEQHPK 129
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
+ + +T I G HS ++D G ++T G G +GQLGHG + P +V + V
Sbjct: 130 QLEV----QGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALV 185
Query: 177 --NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL-- 232
+ + I G + + D + V+ +G ++G + V PQ +GL
Sbjct: 186 RAQQTITSIGVGFDQTFAINADGV---VHSWG--RQGPWLGHAAQPDHVKQPQ-EVGLLK 239
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP----SSLSFS 282
+ +I+ ++A + L+ +G +Y+ G+ G T +P ++ +
Sbjct: 240 NKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVIT 299
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV--KVIQ 340
Q A G H +VL DG VL G +G L + + P +V GV K
Sbjct: 300 QVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRTV--------QGVFDKACA 351
Query: 341 IAAGAEHSAVVT 352
IAAG EH+ V+T
Sbjct: 352 IAAGFEHTIVLT 363
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 161/396 (40%), Gaps = 43/396 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V +WG+G DGQLG G ++ + +VS + G + LA+ G++F+
Sbjct: 10 VLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICD-----DGRLFT 64
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G LGH E P PV G + I GW H V D G + G
Sbjct: 65 WGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAI-GGW-HCLAVDDKGRAYAWGGNE 122
Query: 155 FGQLGHGDYRSHSS--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+GQ G R P + V Q+A G HS+VL ++ V+ +G
Sbjct: 123 YGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQE---GHVWTWG 179
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
Q D I+ +S P GL + ++ + A + ALS + L+ WG G
Sbjct: 180 -----QPWPPGD-IKQISTPVRVQGLEKVMMIAVGAF--HNLALSEDAVLWAWGNNEYGQ 231
Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPER 316
D P+S P S LS A G H LT DGEV G HG L ++
Sbjct: 232 LGIGDTQ-PRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDK 290
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
S PL V L LDG ++Q++ G HS +T + I ++G G+HG+LG G
Sbjct: 291 SSHMVPLKVQL-----LDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTT 345
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
HP V L + + F RH L
Sbjct: 346 GHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTL 381
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG G G+LG G + P + L + ++CGG H +ALTS G++
Sbjct: 272 EVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTS-----DGRI 326
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTF 120
FS+GRG G+LG+G V +P V
Sbjct: 327 FSYGRGDHGRLGYGRKVTTGHPMEVPL 353
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 170/363 (46%), Gaps = 70/363 (19%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVT------------------FFDGHRYTITH--- 130
++ SWGRGSSGQLG G LYP PV TIT
Sbjct: 48 QLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEA 107
Query: 131 ----ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC- 185
IS G HS + D G ++ G G G+LG G H +PV V + +N N+ C
Sbjct: 108 IEVGISCGLFHSALLVD-GNIWIWGKGDGGRLGFG----HENPVFVPT-LNPNLDPAKCV 161
Query: 186 --GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGIS 241
G HS+ L LG QV+ +G G G LG V + LP++ G+ + +I I+
Sbjct: 162 ALGGVHSVAL--TSLG-QVFTWGYGGFGALGHCVYHREL----LPRLVQGISNEKIRHIA 214
Query: 242 ANGDRSAALSAEGHLYTWGR-------------GFNSTSDVNCPQSLPSSLSFSQAAL-- 286
+G +AA++ G +YTWGR G N ++ P + +L+ AA+
Sbjct: 215 TSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKV-KALTVPVAAVFC 273
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G VLT +G++ G + + L + +P + + NL+GV+VIQIA+G
Sbjct: 274 GGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQP-----KPIPNLEGVRVIQIASGGY 328
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTY 405
HS +T+ +++WG+G HGQLG + +Q P V++ L D+ + + CG +
Sbjct: 329 HSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQ-----RVVYIACGGSTSA 383
Query: 406 AIS 408
AI+
Sbjct: 384 AIT 386
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 157/386 (40%), Gaps = 52/386 (13%)
Query: 22 PKIEEEEEEQQV-VKVWSWGAGTDGQLGTGRLHDELSPQ-LLNLSSLSSVSMLACGGAHV 79
P+I + V +++ SWG G+ GQLG G L P + NL +L S L+ +
Sbjct: 34 PEINDHNRNDSVTLQLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQL 93
Query: 80 LALTSPSSV--------------------IGGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
L S++ + G ++ WG+G G+LG G P
Sbjct: 94 LIKNQNSTITKQEAIEVGISCGLFHSALLVDGNIWIWGKGDGGRLGFGHENPVFVPTLNP 153
Query: 120 FFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN 179
D + ++ G HS ++ G +FT G G FG LGH Y P V N+
Sbjct: 154 NLDPAKC----VALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEK 209
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGK-----RGQLGVSKDRIRSVSLPQVTIGLHD 234
+ IA H+ + + +VY +G + G + +S+P L
Sbjct: 210 IRHIATSGTHTAAITET---GEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKAL-T 265
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN--------CPQSLPS--SLSFSQA 284
+ + + G +A L+ EG ++ WG NS ++ P+ +P+ + Q
Sbjct: 266 VPVAAVFCGGFFTAVLTEEGQIWNWGA--NSNYELGRGNKTGGWQPKPIPNLEGVRVIQI 323
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG 344
A G H L LT +G+VL G HG L P + P+ + L +V+ IA G
Sbjct: 324 ASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMV-----IDALADQRVVYIACG 378
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLGL 370
SA +T+ + WG + QLG+
Sbjct: 379 GSTSAAITDEGKLYMWGNAKDSQLGV 404
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 156/358 (43%), Gaps = 53/358 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS---VSMLACGGAHVLALTSPSSVIGGK 92
V++WG GQ G P + ++ + + +ACG +H LA+
Sbjct: 99 VYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPY----G 154
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-----ITHISAGWNHSGFVSDSGCL 147
V+SWG GQLGHG+ ++ P ++ + + ++ G HS VS+ G L
Sbjct: 155 VYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GT G+LGHGD + P VSS V K++ +A G+ HS + D G ++Y +G
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCV--DSNG-KIYSWGW 271
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
+ GQLG ++S +LP + ++ I + HL
Sbjct: 272 NRYGQLG--NGSVKSQTLP-TPPKFQNPKLSDI-------QQQQQQHHLM---------- 311
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
L+F + G NH L L+ GEV+ G + G L + + P+ +
Sbjct: 312 ----------KLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEF 361
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQIHPKVVNL 384
+ VI IA+G HS +T+N +WG+ G LGLG Q PK++ L
Sbjct: 362 NE-------HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPL 412
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGC-L 147
GG V++WG GQ G P + F ++ I I+ G +HS +++ +
Sbjct: 96 GGLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGV 155
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN-------VHQIACGMRHSLVLLKDCLGN 200
++ G +GQLGHGD + + P +S+ + + +ACG +HS+++
Sbjct: 156 YSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSN---YG 212
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
++Y FG G G+LG ++ + P + L IV ++A S+ + + G +Y+WG
Sbjct: 213 ELYTFGCGTTGRLGHGDEQPKFKPTPVSS--LVGKSIVSVAAGVMHSSCVDSNGKIYSWG 270
Query: 261 RGFNSTSDVNC----PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
+N + Q+LP+ F L ++ HH M
Sbjct: 271 --WNRYGQLGNGSVKSQTLPTPPKFQNPKLS-----------DIQQQQQQHHLM------ 311
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+ I++ G H+ ++ + ++ +G+ GQLG GN DQ
Sbjct: 312 ------------------KLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQ 353
Query: 377 IHPKVVNLGD 386
++P + +
Sbjct: 354 LYPVKIEFNE 363
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 42/243 (17%)
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGH-L 256
G VY +G GQ G ++ V + + + I+ A GD S A++ + + +
Sbjct: 96 GGLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGV 155
Query: 257 YTWG------RGFNSTSDVNCPQSLPSSLS---------FSQAALGWNHVLVLTGDGEVL 301
Y+WG G + N P L + S FS A G H ++++ GE+
Sbjct: 156 YSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELY 215
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + +P VS+L G ++ +AAG HS+ V N I +WG
Sbjct: 216 TFGCGTTGRLGHGDEQPKFKPT-----PVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWG 270
Query: 362 WGEHGQLGLGNTCDQIHPKVVNLGDEFQN----------------RDTQLEVFCGSGFTY 405
W +GQLG G+ Q P +FQN + ++V CG T
Sbjct: 271 WNRYGQLGNGSVKSQTLPTP----PKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTL 326
Query: 406 AIS 408
A+S
Sbjct: 327 ALS 329
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 109 bits (272), Expect = 3e-21, Method: Composition-based stats.
Identities = 106/387 (27%), Positives = 162/387 (41%), Gaps = 84/387 (21%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNL----SSLSSVSMLACGGAHVLALTSPSSVIGG 91
+++WG G G+LG G L P+L+ SL VS +A GG H +ALT + G
Sbjct: 182 LYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVS-VANGGKHTVALT-----VCG 235
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKP--VTF------------------------FDGHR 125
V+S+G S QLG G + + Y P VTF F+ +
Sbjct: 236 NVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQ 295
Query: 126 YT-------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
I +S N S +S G L+T G G G+LGHGD S+P +V S
Sbjct: 296 QQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGH 355
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+ ++ G HS+ L K +V+ +G G+ GQLG + ++ Q+ + I
Sbjct: 356 TIVDMSLGGGHSMALTKR---GEVFSWGRGENGQLGHGTFTSQQMTPKQIQ-AFQNKTIK 411
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD- 297
ISA G S A+ G ++ WGRG LG + L GD
Sbjct: 412 VISAGGYHSIAIDTNGSMFAWGRG-------------------DYGVLGVSSSLDSLGDI 452
Query: 298 -GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
VL+ ++ ++ + R ++V+ +G +H+ TEN
Sbjct: 453 NSPVLIKSLNNSNGSNNSNSSAGERFINVS----------------SGFQHNVAQTENGD 496
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ +WG G +LGL N +Q+ PK +N
Sbjct: 497 LYSWGCGSGNRLGLANEENQLIPKKLN 523
Score = 104 bits (260), Expect = 7e-20, Method: Composition-based stats.
Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIA 184
+ IS G H+ ++D G L+T GDG G+LGHG S+S P V F K V +A
Sbjct: 163 VVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVA 222
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV---------------- 228
G +H++ L GN VY FG QLG+ S PQ+
Sbjct: 223 NGGKHTVAL--TVCGN-VYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSS 279
Query: 229 -------TIGLHDIE----------IVGISANGDRSAALSAEGHLYTWGRGFNST--SDV 269
T L + + I+ +S + +RSAA+S G+LYTWGRG N
Sbjct: 280 PIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGD 339
Query: 270 NCPQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ QS P + + +LG H + LT GEV G +G L S
Sbjct: 340 SLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQ---- 395
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ +++ + I+AG HS + N ++ WG G++G LG+ ++ D +
Sbjct: 396 QMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSL 449
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG G +GQLG G +++P+ + ++ +++ GG H +A+ + G +
Sbjct: 375 EVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDT-----NGSM 429
Query: 94 FSWGRGSSGQLGHGEMVDAL--YPKPVTF--------------FDGHRYTITHISAGWNH 137
F+WGRG G LG +D+L PV G R+ ++S+G+ H
Sbjct: 430 FAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERF--INVSSGFQH 487
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ-IACGMRHSLVLLKD 196
+ +++G L++ G G+ +LG + + P K++ N + +CG ++++ K
Sbjct: 488 NVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCGEIITIIVEKK 547
Query: 197 CLGNQVYGFGSGKRGQLGVSK---DRIRSVSLPQ 227
+ N + G++K D + + LP+
Sbjct: 548 LIENSDTSTSTPINTSSGITKSTGDDSKELVLPK 581
Score = 48.1 bits (113), Expect = 0.009, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 43/189 (22%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG------------FNSTSDVNCPQSLPSSLSFSQ 283
++V IS ++ ++ +GHLYTWG G ++ V ++ P SL
Sbjct: 162 KVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKP-SLRVVS 220
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGML----------SDPERVS--------------- 318
A G H + LT G V GG+ L S P+ V+
Sbjct: 221 VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSP 280
Query: 319 -----STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
ST L ++ S+ ++I+++ SA +++ + TWG G++G+LG G++
Sbjct: 281 IIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDS 340
Query: 374 CDQIHPKVV 382
Q PK V
Sbjct: 341 LMQSTPKQV 349
>gi|119588829|gb|EAW68423.1| secretion regulating guanine nucleotide exchange factor, isoform
CRA_a [Homo sapiens]
Length = 354
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 137/288 (47%), Gaps = 31/288 (10%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DGTFG 156
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH + + +P K S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 -LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVP 136
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I LH ++V I+A + A +A G ++ WG G S CP Q+L
Sbjct: 137 HGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTL 194
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L++ ++
Sbjct: 195 PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFL 251
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E KV I +G H TE + TWG ++GQLG
Sbjct: 252 PVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 124/284 (43%), Gaps = 25/284 (8%)
Query: 43 TDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
+ GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGLNKD 78
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-- 159
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQLG
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGKRGQLGVS 216
HG R P + K V IA G+RH++ + Q +G G G+R G +
Sbjct: 137 HGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ-WGTGLASCGRRLCPGQT 193
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDVNC 271
+ P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 194 LPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV 253
Query: 272 PQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML 311
PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 254 PQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQL 297
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 145/309 (46%), Gaps = 33/309 (10%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
V +WG G GQLG G + D V D R + + + AG +S + + G LFT G
Sbjct: 7 VLAWGAGEDGQLGLGNLQDK---DSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWG 63
Query: 152 DGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G LGH + ++ S+P +V + N + Q A G H L + ++ + Y +G +
Sbjct: 64 WNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE---GRTYAWGGNEY 120
Query: 211 GQL------------GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
GQ G SK R +++PQ + ++A G S L+ EGH++T
Sbjct: 121 GQCAEEQQTKEQQNKGESKVLHRDITIPQRCA-----PRLCVAAGGTHSVVLTEEGHVWT 175
Query: 259 WGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
WG+ + ++ P + + + A+G H L L GEV G + +G L +
Sbjct: 176 WGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDT 235
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG-NTCD 375
+ P+ V L G+ ++ IAAG HS +T + A+ WG GEHG+LG G +
Sbjct: 236 QPRSSPV-----PVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSS 290
Query: 376 QIHPKVVNL 384
++ P+ V+L
Sbjct: 291 KMLPQKVHL 299
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+VW+WG GQLGTG SP + L+ L V +A GG H +ALT G V
Sbjct: 218 EVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVD-IAAGGWHSMALTPD-----GAV 271
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WGRG G+LG G+ + P+ V G + +S G HS + SG +F+ G
Sbjct: 272 YGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGE--PVVQVSCGGTHSVAATISGRMFSFGR 329
Query: 153 GTFGQLGHGDYRSHSSPVKVS---------SFVNKN---------VHQIACGMRHSLVL 193
G G+LG+G + PV+V + V+++ V +ACG RH+L +
Sbjct: 330 GDHGRLGYGGAVTTGHPVEVPVSLHHYSRHNIVSEDEANGSTRWVVKLVACGGRHALAV 388
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 163/332 (49%), Gaps = 37/332 (11%)
Query: 93 VFSWGRGSSGQLGH-GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++WGR + +LG G D+ P+ + F+ I ++ G H+ + + GCL + G
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVFE--NCAIQQVACGGGHTLVLLEDGCLHSFG 69
Query: 152 DGTFGQLGHGDYRSHSSPVK----VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+GQLG+G SP+ +SS NK + +ACG HS L + V+ +G
Sbjct: 70 YNQYGQLGNG--TKVDSPLDASRDISSLSNKLI-AVACGRYHSAALD---VNGTVFTWGG 123
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN--- 264
GK G+LG + ++ R++ ++T H I +AA++ +G LYTWG G +
Sbjct: 124 GKNGRLGHNDEQTRTIPC-RIT---HLPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQL 178
Query: 265 ---STSDVNCPQSL---PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
S D P+ + ++L+ SQ A G H LV T G+V G + G L +
Sbjct: 179 GQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLG----IG 234
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ + +++L G+ V +AAG HSA VT ++ TWG G GQ G G+ D
Sbjct: 235 RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDM 294
Query: 379 PKVV-NLGDEFQNRDTQLEVFCGSGFTYAISR 409
P +V +L F L+VFCG FT A+S+
Sbjct: 295 PFLVESLVGVF-----ILKVFCGHNFTVALSK 321
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WG G GQLG G L D P+ + + ++S LACG H L T G V+
Sbjct: 167 LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTES-----GDVY 221
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GQLG G + +Y PV +T ++AG HS V+++G LFT G G
Sbjct: 222 TWGSNEFGQLGIGRY-NEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGA 280
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ GHGDY P V S V + ++ CG ++ L KD N +Y FG+ GQLG
Sbjct: 281 EGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKD---NDIYVFGNNSYGQLG 337
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 24/307 (7%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSW 96
S+G GQLG G D ++SSLS+ + +ACG H AL + G VF+W
Sbjct: 67 SFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALD-----VNGTVFTW 121
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G G +G+LGH + P +T H I G++ + ++D G L+T G G G
Sbjct: 122 GGGKNGRLGHNDEQTRTIPCRIT----HLPRAHKIFCGYHITAAITDDG-LYTWGWGEHG 176
Query: 157 QLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P KV N + Q+ACG RH LV + VY +GS + GQLG+
Sbjct: 177 QLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTE---SGDVYTWGSNEFGQLGI 233
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDV 269
+ S P + L + + ++A SAA++ G L+TWG G +D
Sbjct: 234 GRYN-EIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDC 292
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P + S + + G N + L+ D ++ + G + +G L D + S P +
Sbjct: 293 DMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFF 352
Query: 328 EKVSNLD 334
+D
Sbjct: 353 SIPGTID 359
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKV 93
V++WG+ GQLG GR ++ S +L L+SL+ V+ +A G H A+T+ G +
Sbjct: 220 VYTWGSNEFGQLGIGRYNEIYSSPVL-LTSLAGMMVTFVAAGDRHSAAVTNT-----GSL 273
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F+WG G+ GQ GHG+ D P V G I + G N + +S ++ G+
Sbjct: 274 FTWGCGAEGQCGHGDYNDCDMPFLVESLVG--VFILKVFCGHNFTVALSKDNDIYVFGNN 331
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
++GQLG G S +P K+ + + I CG H
Sbjct: 332 SYGQLGDGSKSSCCTPRKLFFSIPGTI-DITCGHFH 366
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 252 AEGHLYTWGRGFN------STSDVNCPQSLPS---SLSFSQAALGWNHVLVLTGDGEVLM 302
A LYTWGR N T D +C L + + Q A G H LVL DG +
Sbjct: 8 ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + +G L + +V S S + +SN K+I +A G HSA + N + TWG
Sbjct: 68 FGYNQYGQLGNGTKVDSPLDASRDISSLSN----KLIAVACGRYHSAALDVNGTVFTWGG 123
Query: 363 GEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G++G+LG + + P ++ +L + +FCG T AI+
Sbjct: 124 GKNGRLGHNDEQTRTIPCRITHLPRAHK-------IFCGYHITAAIT 163
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 28/329 (8%)
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGH---RYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG SSGQLG + A + V G T+ + G HS + G +++C
Sbjct: 3 YCWGDNSSGQLGIPAVPRA-KARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSC 61
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+ + GQLG + H P ++ + +++ ++CG HSL + K+ +V+ +GSG
Sbjct: 62 GNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKE---GRVFSWGSGSD 118
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
GQLG+ + + S S+P+ L +I+ +S S AL+ +G +++WG+ N+ +
Sbjct: 119 GQLGIREFKKLS-SIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGK--NNHGQLG 175
Query: 271 CPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+++PS S +Q A G H L+ G G ++ G L+ + S
Sbjct: 176 LGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKES 235
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+S + L ++V I+ G EH+AV+T++ + T+G + GQLG P
Sbjct: 236 AEQISKPFS-IGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGP 294
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+VV+ F ++ CGS T A S
Sbjct: 295 QVVDSAVSFS------QIACGSYHTLAYS 317
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 148/329 (44%), Gaps = 21/329 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VWS G + GQLG R P + + ++CG H LA+ G+VFS
Sbjct: 58 VWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKE-----GRVFS 112
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GS GQLG E L P + + I +S G HS ++ G +F+ G
Sbjct: 113 WGSGSDGQLGIREF-KKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNH 171
Query: 156 GQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ S +SP V S + Q+A G HS L YG+G GQL
Sbjct: 172 GQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL---SFSGTSYGWGRNNAGQLA 228
Query: 215 VS--KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
+S K+ +S P L +++ IS + +A L+ +G ++T+G G
Sbjct: 229 LSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLI 288
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLT-GDGEVLMLG-GSHHGMLSDPERVSSTRPLS 324
S + PQ + S++SFSQ A G H L + G+V+ G GS + + + + +
Sbjct: 289 SGMKGPQVVDSAVSFSQIACGSYHTLAYSCTTGQVISFGCGSQRDPIGPLQPGDAVQNFN 348
Query: 325 VA-LEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ L ++ +V I AGA + V T
Sbjct: 349 ISNLISSNDFTDFQVKDIFAGANANFVTT 377
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGGK 92
+V+SWG+G+DGQLG R +LS + LSS ++ +CG H +AL G+
Sbjct: 109 RVFSWGSGSDGQLGI-REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQ-----DGR 162
Query: 93 VFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG+ + GQLG GE V + P+ V DG + ++AG HS +S SG + G
Sbjct: 163 VFSWGKNNHGQLGLGENVPSQASPQWVKSLDG--IPLAQVAAGGAHSFALSFSGTSYGWG 220
Query: 152 DGTFGQLGHGDYRSH----SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
GQL + S P + V I+CG H+ VL +D +V+ FGS
Sbjct: 221 RNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQD---GKVFTFGS 277
Query: 208 GKRGQLGVSKDRIRSVSLPQVT 229
GQLG + I + PQV
Sbjct: 278 NDSGQLG--RQLISGMKGPQVV 297
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 176/406 (43%), Gaps = 61/406 (15%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ +WG + LG G + + P L+ S V ++CG + L + GGKV
Sbjct: 69 QLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKV 128
Query: 94 FSWGRGSSGQLGHGEMV----------DA----------LYPKPVTFFDGHRYTITHISA 133
+++G G+ G+LG+ + DA PKP + I IS
Sbjct: 129 YTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISC 188
Query: 134 GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-------SSFVNKN------- 179
G +H+ +SD G L+ G G++G LG GD SPV+V S +N
Sbjct: 189 GADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRG 248
Query: 180 -----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
V A G +HS+ D ++ +G G G+LG+ +R S+S P V + D
Sbjct: 249 TDPVVVTCCAAGAKHSMACTSD---GTLWTWGHGGNGRLGLGHNR-GSLS-PAVVDYILD 303
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAAL 286
++V +SA SA + +G LYTWG G ++ P+ + + Q A
Sbjct: 304 RDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVAC 363
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-VSNLDGVKVIQIAAGA 345
G H L LT G V G G+ V + K +S+++ V V+ +AAG
Sbjct: 364 GTFHTLALTHKGTVFAWGA---GLALGLGEGEDGGGGMVTVPKHLSDIE-VAVLNVAAGP 419
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
HSA VT ++ WG G +LG G+ +Q PK V + +NR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVA---DLRNR 462
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 133/327 (40%), Gaps = 37/327 (11%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
++ L CG H +ALT G V+ WG GQLG GE V+ +PV D
Sbjct: 502 TLQSLGCGENHTVALTGT-----GAVWVWGSNDEGQLGLGEQVEEDQYEPVKL-DCFSTP 555
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
I I+ G H V+ G +F G GQLG G R P V++ + + CG
Sbjct: 556 IRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTAL--RQAIDVFCGD 613
Query: 188 RHS-------------LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLH 233
+S L L ++ +G+ + G+LG+ +D S+ PQ
Sbjct: 614 DYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVP--F 671
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQS--LPSSLSFSQAA 285
+ + S + A++A G Y WG G+ +T++ P P + A
Sbjct: 672 SVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVA 731
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G +H L L+ DG++ + G +S R + + LE S + VK IAA
Sbjct: 732 AGASHSLALSMDGDLWIWGKKED--TCSTTNYNSPR-IFMQLESPSGVPKVK--SIAAAE 786
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGN 372
HS VTE + WG + Q G G
Sbjct: 787 HHSLAVTETGEVFAWGDNKLYQTGCGK 813
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 151/382 (39%), Gaps = 43/382 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W+WG G +G+LG G LSP +++ V ++ G +H + G +++
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQ-----GVLYT 327
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT--CGDG 153
WG G G+LGHG+ + P+ V F G + ++ G H+ ++ G +F G
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGG--VPVLQVACGTFHTLALTHKGTVFAWGAGLA 385
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G + K S + V +A G HS + +G + +G G +L
Sbjct: 386 LGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAV---TVGGDLLVWGVGGSSRL 442
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC-- 271
G + + P+ L + V D + L R SD +
Sbjct: 443 GHGDQQ--NQPFPKYVADLRNRMYVA-----DLQSMLGV-------SRLRRDYSDFDVLG 488
Query: 272 -----PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ ++ + G NH + LTG G V + G + G L E+V + V
Sbjct: 489 ESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVK 548
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
L+ S + +IA G++H V + + WG + GQLGLG P V
Sbjct: 549 LDCFST----PIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALR 604
Query: 387 EFQNRDTQLEVFCGSGFTYAIS 408
+ ++VFCG ++ I+
Sbjct: 605 Q------AIDVFCGDDYSACIT 620
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 114/308 (37%), Gaps = 74/308 (24%)
Query: 127 TITHISAGWNHS---GFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQ 182
++ ++ G H+ G D L G LG G + R P V F V +
Sbjct: 47 SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106
Query: 183 IACGMRHSLVLLKDCL--GNQVYGFGSGKRGQLGVSKDRIRSVSLPQ------------- 227
++CG +S VL+K G +VY FG G RG+LG K + + Q
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166
Query: 228 ------VTIGLHD-IEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCPQS 274
+ D +I IS D + ALS G LY WG G TSD P
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSP-- 224
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
V +L GS G E + R D
Sbjct: 225 -------------------------VRVLLGSEKGSGKKKENLGIGR---------RGTD 250
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394
V V AAGA+HS T + + TWG G +G+LGLG+ + P VV D +RD
Sbjct: 251 PVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVV---DYILDRDV- 306
Query: 395 LEVFCGSG 402
VF +G
Sbjct: 307 --VFVSAG 312
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 33/247 (13%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS---------SVSMLACGGAHVLAL 82
Q V++WGA DGQLG G L P + + S + + GGA ++L
Sbjct: 571 QYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQTVSL 630
Query: 83 TSPSSVIGGKVFSWGRGSSGQLGHGEMVDA---LYPKPVTFFDGHRYTITHISAGWNHSG 139
S G +++WG SG+LG GE V + L P+ V F + S G +H+
Sbjct: 631 ALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF----SVPVCACSLGTSHAL 686
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
++ G + G G +G+LG G + +P K + +A G HSL L D
Sbjct: 687 AITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMD--- 743
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSL--PQVTIGLHD----IEIVGISANGDRSAALSAE 253
G G +D + + P++ + L ++ I+A S A++
Sbjct: 744 --------GDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTET 795
Query: 254 GHLYTWG 260
G ++ WG
Sbjct: 796 GEVFAWG 802
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 129/351 (36%), Gaps = 84/351 (23%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY- 126
+V +A G H A+T +GG + WG G S +LGHG+ + +PK V Y
Sbjct: 411 AVLNVAAGPYHSAAVT-----VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV 465
Query: 127 ------------------------------------TITHISAGWNHSGFVSDSGCLFTC 150
T+ + G NH+ ++ +G ++
Sbjct: 466 ADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVW 525
Query: 151 GDGTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G GQLG G+ PVK+ F + + +IACG +H L + + V+ +G+
Sbjct: 526 GSNDEGQLGLGEQVEEDQYEPVKLDCF-STPIRRIACGSKHCLAVAQ---YGDVFAWGAN 581
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
GQLG+ +R P L + + + D SA +++ G T S ++
Sbjct: 582 DDGQLGLGV--LRPSFEPAAVTALR--QAIDVFCGDDYSACITSNGGAQTVSLALESGTE 637
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
G++ G + G L E V+S L+
Sbjct: 638 F----------------------------GDLWTWGAAESGKLGLGEDVASGSILTPQKV 669
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
S V V + G H+ +T WG G +G+LG+G T + P
Sbjct: 670 PFS----VPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAP 716
>gi|219129772|ref|XP_002185055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403550|gb|EEC43502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 727
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 187/422 (44%), Gaps = 61/422 (14%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGG-----AHVLALTSPSSV 88
V +WG G GQLG G+ DE P+ L + + ++ GG AH L LTS
Sbjct: 235 VAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLLLTST--- 291
Query: 89 IGGKVFSWGRGSSGQLGHG-----EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
G+V S+G G G LGHG ++ D + P+ V R + ++AG HS V+
Sbjct: 292 --GRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVR--VCCVAAGELHSAVVTS 347
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQ 201
G ++T GDG GQLGH D R +P +V++ ++ V I+CG RH+L + +D +
Sbjct: 348 DGDVYTWGDGFCGQLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVTED---GE 404
Query: 202 VYGFGSGKRGQLGVS---KDRIRSVSLPQVTI-------GLHDIEIVGISAN----GDRS 247
V+ +G G G LG S D ++ T+ G I + I N D
Sbjct: 405 VFSWGLGHFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVARIPDNVAPAVDSF 464
Query: 248 AALSAEGHLYTWGRGF------------NSTSDVNCPQSLPSSLSFSQ------AALGWN 289
A GR F N + D + Q +P + Q A+ G
Sbjct: 465 PPRDAAAPALLEGRNFAAELMAHLDLIANLSLDDSSDQCIPKVIESLQGIPMVGASAGHR 524
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG---VKVIQIAAGAE 346
H L+L+ +G + G G L + S P+ + DG +++Q++AG +
Sbjct: 525 HSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDGSERTRILQMSAGVD 584
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQLEVFCGSGFTY 405
S V+ ++ WG + G++GLG +Q+ P+ V++ E ++ L V G+ +
Sbjct: 585 ISMAVSTRGSVYGWGKTDGGRIGLGMARNQVTLPRRVSVYRE-EDGSPVLAVDVECGYVH 643
Query: 406 AI 407
+I
Sbjct: 644 SI 645
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 153/363 (42%), Gaps = 48/363 (13%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-----HSGFVSDS 144
G V +WG G GQLGHG+ D P+ + G+ I +SAG HS ++ +
Sbjct: 232 GSGVAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLLLTST 291
Query: 145 GCLFTCGDGTFGQLGHGDYRSHS-----SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
G + + G G +G LGHG + P V + V +A G HS V+ D
Sbjct: 292 GRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTSD--- 348
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYT 258
VY +G G GQLG D+ ++ QVT GL D + IS + A++ +G +++
Sbjct: 349 GDVYTWGDGFCGQLG-HADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVTEDGEVFS 407
Query: 259 WGRG-----------FNSTSD-------------VNCPQSLPSSLSFSQAALGWNHVLVL 294
WG G F+ +D V+ +P + A +
Sbjct: 408 WGLGHFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVARIPDNVAPAVDSFPPR 467
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK-----VSNLDGVKVIQIAAGAEHSA 349
L+ G + L + + L + ++ + +L G+ ++ +AG HS
Sbjct: 468 DAAAPALLEGRNFAAELMAHLDLIANLSLDDSSDQCIPKVIESLQGIPMVGASAGHRHSL 527
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ----NRDTQLEVFCGSGFTY 405
++++ A+ + G G G LG G+T Q+HP + DE + R L++ G +
Sbjct: 528 LLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDGSERTRILQMSAGVDISM 587
Query: 406 AIS 408
A+S
Sbjct: 588 AVS 590
>gi|402894100|ref|XP_003910210.1| PREDICTED: uncharacterized protein LOC101008912 [Papio anubis]
Length = 878
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 137/291 (47%), Gaps = 31/291 (10%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
G S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLKDFCKPR-SVRRITGGGGHSAVVTDVGDLFVCGLNKDG 506
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G LGH + + +P K S + Q+ACG +++L ++ QV GS GQL
Sbjct: 507 QLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIILTEN---GQVLSCGSNSFGQL 560
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP- 272
GV R V +PQ I LH ++V I+A + A +A G ++ WG G S CP
Sbjct: 561 GVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWGTGLASCGRRLCPG 618
Query: 273 QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
Q+LP + L S+A G +H LT GEV + G + HG L+ +
Sbjct: 619 QTLPLFFTAKEPSRVTGLENSKAMCVLAGADHSASLTDAGEVYVWGSNKHGQLATE---A 675
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ P+ +E KV + +G H TE + TWG ++GQLG
Sbjct: 676 AFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLG 725
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 173/403 (42%), Gaps = 47/403 (11%)
Query: 40 GAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ L + SV + GG H +T G +F G
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLKDFCKPRSVRRITGGGGHSAVVTD-----VGDLFVCGL 502
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQL
Sbjct: 503 NKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIILTENGQVLSCGSNSFGQL 560
Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
G HG R P + K V IA G+RH+L + V+ +G+G +R
Sbjct: 561 GVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHALAATASGI---VFQWGTGLASCGRRL 615
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNST 266
G + + P GL + + + + A D SA+L+ G +Y WG
Sbjct: 616 CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGADHSASLTDAGEVYVWGSNKHGQLATEA 675
Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-------- 314
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 676 AFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEGWK 735
Query: 315 -ERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
E+ S P S L + S+L + +++ G+EH+ V +WGW EHG G G
Sbjct: 736 LEKQDSFLPCSRLLNSMPSSLHCLTGATEVSCGSEHNLAVI-GGVCYSWGWNEHGMCGDG 794
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
+ PK V + + L V CG+G + A+ + LP+
Sbjct: 795 TETNIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ--LPA 831
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
KV++WG GQLG D P +LLN L L+ + ++CG H
Sbjct: 712 KVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNSMPSSLHCLTGATEVSCGSEH 771
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
LA VIGG +SWG G G G + PKPV GH
Sbjct: 772 NLA------VIGGVCYSWGWNEHGMCGDGTETNIWAPKPVQALLSSSGLLVGCGAGHSLA 825
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ + A H V D + D T
Sbjct: 826 LCQLPA---HPALVQDPKVTYLSPDAT 849
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + V+ + G H++A T GK
Sbjct: 659 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTE-----TGK 712
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYP-------KPVTFFDGHRYT-ITHISAGW 135
VF+WGR GQLG E D+ P P + H T T +S G
Sbjct: 713 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNSMPSSL---HCLTGATEVSCGS 769
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ V C ++ G G G G + +P V + ++ + + CG HSL L +
Sbjct: 770 EHNLAVIGGVC-YSWGWNEHGMCGDGTETNIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 828
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 28/271 (10%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ ++G HS + +G L + GD + GQLG D + P ++ + V ++CG
Sbjct: 25 LRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGK 84
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDR 246
HSL + C +V+ +G+G GQLG+ + ++L P+ L DI+I+ +S
Sbjct: 85 EHSLAV---CYKGRVFAWGAGSEGQLGIGE--FNEINLIPRKIKTLTDIKIIQVSCGHHH 139
Query: 247 SAALSAEGHLYTWGRGFNSTSDV----NCP-QSLPSSLSF------SQAALGWNHVLVLT 295
S ALS +G L+TWG NS + CP Q+ P + F +Q A G H L+
Sbjct: 140 SLALSEDGRLFTWGS--NSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALS 197
Query: 296 GDGEVLMLGGSHHGMLSDPER----VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
G G + G L+ ++ V S++P S V L+ + V+ I+ G EH+AV+
Sbjct: 198 LSGASFGWGSNSEGQLALRKKNVPVVQSSKPCS-----VDALENLGVVYISCGYEHTAVL 252
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
T+ + T+G +GQLG T + P++V
Sbjct: 253 TQTGKVFTFGGNSYGQLGYSPTAGKEGPQLV 283
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
S+G + GQLG + + P+ + V +++CG H LA+ G+VF+WG
Sbjct: 46 SYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAV-----CYKGRVFAWG 100
Query: 98 RGSSGQLGHGEMVDA-LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GS GQLG GE + L P+ + + I +S G +HS +S+ G LFT G + G
Sbjct: 101 AGSEGQLGIGEFNEINLIPRKIKTLTDIK--IIQVSCGHHHSLALSEDGRLFTWGSNSHG 158
Query: 157 QLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G + S +SP +V + Q+A G HS L L +G+GS GQL +
Sbjct: 159 QLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFAL---SLSGASFGWGSNSEGQLAL 215
Query: 216 SKDRIRSV--SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
K + V S P L ++ +V IS + +A L+ G ++T+G
Sbjct: 216 RKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFG 262
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 140/305 (45%), Gaps = 31/305 (10%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
A G H L L S G++ S+G S GQLG ++ PK + + R + +S
Sbjct: 29 ASGERHSLLLLS-----NGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDL--VS 81
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSL 191
G HS V G +F G G+ GQLG G++ + P K+ + + + Q++CG HSL
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSL 141
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
L +D +++ +GS GQLG+ K+ S + PQ L I + ++A G S ALS
Sbjct: 142 ALSED---GRLFTWGSNSHGQLGLGKE-CPSQASPQRVQFLDGIPLTQVAAGGAHSFALS 197
Query: 252 AEGHLYTWG---RGFNSTSDVNCP---QSLPSS------LSFSQAALGWNHVLVLTGDGE 299
G + WG G + N P S P S L + G+ H VLT G+
Sbjct: 198 LSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGK 257
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIM 358
V GG+ +G L P + V +DG+ V QI G+ H+ A V ++
Sbjct: 258 VFTFGGNSYGQLGYSPTAGKEGP-----QLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVV 311
Query: 359 TWGWG 363
++G G
Sbjct: 312 SFGRG 316
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 16/188 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WGAG++GQLG G ++ L P+ + + + ++CG H LAL+ G++
Sbjct: 95 RVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE-----DGRL 149
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG S GQLG G E P+ V F DG +T ++AG HS +S SG F G
Sbjct: 150 FTWGSNSHGQLGLGKECPSQASPQRVQFLDG--IPLTQVAAGGAHSFALSLSGASFGWGS 207
Query: 153 GTFGQLGHGDYR----SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GQL S P V + N V I+CG H+ VL + +V+ FG
Sbjct: 208 NSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQ---TGKVFTFGGN 264
Query: 209 KRGQLGVS 216
GQLG S
Sbjct: 265 SYGQLGYS 272
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ + GQLG G+ + SPQ + ++ +A GGAH AL+ + G
Sbjct: 148 RLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFALS-----LSGAS 202
Query: 94 FSWGRGSSGQLG-HGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
F WG S GQL + V + KP + + +IS G+ H+ ++ +G +FT G
Sbjct: 203 FGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFG 262
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
++GQLG+ P V ++ V QI CG H+L + +V FG G
Sbjct: 263 GNSYGQLGYSPTAGKEGPQLVEG-IDGLVSQIDCGSYHTLAYVYT--TGKVVSFGRG 316
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 241 SANGDR-SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHV 291
+A+G+R S L + G L+++G G P+ +P+ +L + G H
Sbjct: 28 AASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHS 87
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
L + G V G G L + +++ K+ L +K+IQ++ G HS +
Sbjct: 88 LAVCYKGRVFAWGAGSEGQLG----IGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLAL 143
Query: 352 TENRAIMTWGWGEHGQLGLGNTC-DQIHPKVVNLGD 386
+E+ + TWG HGQLGLG C Q P+ V D
Sbjct: 144 SEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLD 179
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 32 QVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q KV+++G + GQLG + PQL+ + L VS + CG H LA +
Sbjct: 254 QTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGL--VSQIDCGSYHTLAYVYTT---- 307
Query: 91 GKVFSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
GKV S+GRG + H E + ++ D + + HI AG H+ FV+
Sbjct: 308 GKVVSFGRGPCCKSSPTHPEAPTENFTCLISADDLVDFEVKHIFAG-THANFVT------ 360
Query: 149 TCGD 152
TC D
Sbjct: 361 TCQD 364
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GRL + +PQL+ S + ++ G AH +AL+ + G +
Sbjct: 397 ELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALS-----MSGNI 451
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G +P + D + + ++ G +H+ ++ G +FT G G
Sbjct: 452 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK--VEFLACGGSHTALLTKDGLVFTFGAG 509
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH ++ P V+ V Q+ACG H+L + D LG +V+ FGSGK GQL
Sbjct: 510 KYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSD-LG-KVFSFGSGKEGQL 567
Query: 214 GVSKDRIRSVSLP 226
G + + LP
Sbjct: 568 GNGGTHNQLIPLP 580
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 24/239 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K++ QI CG HSL L K G +++ +G GQLGV + S+ PQ+ L + +
Sbjct: 377 KSIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-LFTSIPTPQLVEHLSGVPL 432
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
V ISA S ALS G++Y+WGR G T+ + P SL +L + A G
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFP-SLIEALDNQKVEFLACGG 491
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG V G +G L + RP V+ L G +V Q+A G H+
Sbjct: 492 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRP-----RLVTELAGNRVTQVACGRWHT 546
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD----EFQNRDTQLEVFCGSG 402
A V++ + ++G G+ GQLG G T +Q+ P + L +F++R ++ E+ +G
Sbjct: 547 LAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAG 605
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 28/267 (10%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHR 125
S+ + CG H LAL+ GG++F+WG+ GQLG G + ++ P+ V G
Sbjct: 377 KSIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSG-- 429
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G GQLG G P + + N+ V +AC
Sbjct: 430 VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLAC 489
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G H+ +L KD L V+ FG+GK GQLG +++ +R P++ L + ++
Sbjct: 490 GGSHTALLTKDGL---VFTFGAGKYGQLGHNSTQNELR----PRLVTELAGNRVTQVACG 542
Query: 244 GDRSAALSAE-GHLYTWGRGFNS--------TSDVNCPQSLPSS--LSFSQAALGWNHVL 292
+ A ++ G ++++G G + P LPS+ L F ++
Sbjct: 543 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIM 602
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ G+ +L+ G + ++ R+ +
Sbjct: 603 IAGGNQSILLWMGKKNPYVNLRRRIPT 629
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG +EL P+L+ + + V+ +ACG H LA S GKVFS
Sbjct: 503 VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDL----GKVFS 558
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTF 120
+G G GQLG+G + L P P+
Sbjct: 559 FGSGKEGQLGNGGTHNQLIPLPMKL 583
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 273 QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
Q + S Q G H L L+ GE+ G + HG L R+ ++ P + V +
Sbjct: 371 QCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGV-GRLFTSIPTP---QLVEH 426
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
L GV ++QI+AG HS ++ + I +WG + GQLGLG+T + P ++ D
Sbjct: 427 LSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALD 480
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 163/365 (44%), Gaps = 45/365 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHD--ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ +WG+G+ +LG + + +P+ L ++S + ++CG + ALT G V
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTE-----NGDV 598
Query: 94 FSWGRGSS-----GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
+ WGRGS LG+G D L P+ V I IS G+ HS V +G L
Sbjct: 599 YMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQ----EIVVISIGFYHSAAVKSNGELL 654
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
T G G GQLGHGD + P V S + V Q+ CG +H++ L K+ +V+ +G+
Sbjct: 655 TWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKN---GKVFTWGTS 711
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--FNST 266
+ GQLG+ + P + L I+ I+ +A L+ + +G G S
Sbjct: 712 EYGQLGLGDTQKNCT--PMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSA 769
Query: 267 SDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM------LGGSHHGMLSDPERVS 318
+ ++ P +PS ++ + + G LT G+V LG H + P+ V
Sbjct: 770 NIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQELGHGHGTSEAHPKLVE 829
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+ R S+ QI+ G H A +T++ I T G GQLG DQ
Sbjct: 830 TLRNQSIR-------------QISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA-AGDQNR 875
Query: 379 PKVVN 383
PK ++
Sbjct: 876 PKKID 880
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 79/205 (38%), Gaps = 52/205 (25%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI----- 89
KV++WG GQLG G +P L+ + +ACG H LT+ V+
Sbjct: 704 KVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNG 763
Query: 90 --------------------------------------GGKVFSWGRGSSGQLGHGEMVD 111
G V++WG G +LGHG
Sbjct: 764 AAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTS 821
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH--GDYRSHSSP 169
+PK V +I IS G H F++DSG ++T G FGQLGH GD + P
Sbjct: 822 EAHPKLVETLRNQ--SIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGD---QNRP 876
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLL 194
K+ S + I+CG H+ L
Sbjct: 877 KKIDSLLKTTFMSISCGENHNAALF 901
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 37/322 (11%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ +WG GS +LG + P P + + I IS G +S ++++G ++ G
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGR 603
Query: 153 GT-----FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G+ LG+G + P KV S + + I+ G HS + + ++ +G
Sbjct: 604 GSVKNPPIATLGNGTFDDQLLPQKVESL--QEIVVISIGFYHSAAVKSN---GELLTWGC 658
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+ GQLG + + +P+V + + + + L+ G ++TWG
Sbjct: 659 GEDGQLG--HGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQL 716
Query: 262 GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G T NC L +SL Q A G H VLT + EVL+ G +G +
Sbjct: 717 GLGDTQK-NCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFG---NGAAMGSANII 772
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
S P+ V K+ N++ +++ G +A +TE + TWG G+ +LG G+ + H
Sbjct: 773 SI-PIMVPSLKIMNIE-----RLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTSEAH 824
Query: 379 PKVVNLGDEFQNRDTQLEVFCG 400
PK+V + +N+ + ++ CG
Sbjct: 825 PKLV---ETLRNQSIR-QISCG 842
>gi|268559042|ref|XP_002637512.1| C. briggsae CBR-GLO-4 protein [Caenorhabditis briggsae]
Length = 1100
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG H+L L+S G++ +WG GQ G G A + DG +I I
Sbjct: 485 IACGAEHILVLSS-----SGQLSAWGGNKHGQCGVGH---AFRLANLQQIDGDWPSIEKI 536
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACGMR 188
+ G HS F+ G L+T G G +GQLG G R +S+ P KV+ ++K V Q+ACG
Sbjct: 537 ACGQFHSAFICSDGSLWTFGWGIWGQLGQGG-RFNSNILVPTKVNGLISK-VTQVACGRA 594
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H++VL ++ +V GSG GQ+GV KD +S S + +G + I+ + S
Sbjct: 595 HTIVLTEN---GRVLVCGSGSYGQMGVDKDIKKSFSFTPLPLGPFRVNF--IATHYYHSI 649
Query: 249 ALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
++ E ++ WGR PQ L + + L T D + +
Sbjct: 650 CVTDENRIFEWGRN---------PQELKMRMFVMKKIRSAQ--LKNTEDANSPTPTPTVN 698
Query: 309 GMLSDPERVSSTRPLSVALEKVS------NLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G RV+ P + E + LDG +++IA G HSA++T ++ TWG
Sbjct: 699 GTAP---RVNLNLPAEIPREDLGLREVKHFLDG-SIVKIACGLSHSALITSEGSLYTWGK 754
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
G QLG GN +++ P V +E +
Sbjct: 755 GLDYQLGHGNKTERMEPHQVFEPNEVK 781
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 141/326 (43%), Gaps = 72/326 (22%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIGGKV 93
+WG GQ G G +L NL + S+ +ACG H + S G +
Sbjct: 503 AWGGNKHGQCGVGHAF-----RLANLQQIDGDWPSIEKIACGQFHSAFICS-----DGSL 552
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+++G G GQLG G ++ P T +G +T ++ G H+ ++++G + CG G
Sbjct: 553 WTFGWGIWGQLGQGGRFNSNILVP-TKVNGLISKVTQVACGRAHTIVLTENGRVLVCGSG 611
Query: 154 TFGQLG-HGDYRSHSS--PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK- 209
++GQ+G D + S P+ + F V+ IA HS+ + + N+++ +G
Sbjct: 612 SYGQMGVDKDIKKSFSFTPLPLGPF---RVNFIATHYYHSICVTDE---NRIFEWGRNPQ 665
Query: 210 --RGQLGVSKDRIRSVSL------------------------------PQVTIGLHDIE- 236
+ ++ V K +IRS L P+ +GL +++
Sbjct: 666 ELKMRMFVMK-KIRSAQLKNTEDANSPTPTPTVNGTAPRVNLNLPAEIPREDLGLREVKH 724
Query: 237 -----IVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSL-PSSLSFSQ 283
IV I+ SA +++EG LYTWG+G N T + Q P+ + ++
Sbjct: 725 FLDGSIVKIACGLSHSALITSEGSLYTWGKGLDYQLGHGNKTERMEPHQVFEPNEVKWTN 784
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHG 309
+LG NH + T DG V G + G
Sbjct: 785 VSLGNNHTIGSTDDGSVYAWGKNEFG 810
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
S+ +ACG +H +TS G +++WG+G QLGHG + + P V F+ +
Sbjct: 729 SIVKIACGLSHSALITS-----EGSLYTWGKGLDYQLGHGNKTERMEPHQV--FEPNEVK 781
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
T++S G NH+ +D G ++ G FGQ G
Sbjct: 782 WTNVSLGNNHTIGSTDDGSVYAWGKNEFGQCG 813
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 91/270 (33%), Gaps = 97/270 (35%)
Query: 36 VWSWGAGTDGQLGTG-RLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI---- 89
+W++G G GQLG G R + L P +N +S V+ +ACG AH + LT V+
Sbjct: 552 LWTFGWGIWGQLGQGGRFNSNILVPTKVN-GLISKVTQVACGRAHTIVLTENGRVLVCGS 610
Query: 90 -------------------------------------------GGKVFSWGRG------- 99
++F WGR
Sbjct: 611 GSYGQMGVDKDIKKSFSFTPLPLGPFRVNFIATHYYHSICVTDENRIFEWGRNPQELKMR 670
Query: 100 -------SSGQLGHGEMVDALYPKPVT---------------------------FFDGHR 125
S QL + E ++ P P F DG
Sbjct: 671 MFVMKKIRSAQLKNTEDANSPTPTPTVNGTAPRVNLNLPAEIPREDLGLREVKHFLDG-- 728
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+I I+ G +HS ++ G L+T G G QLGHG+ P +V ++
Sbjct: 729 -SIVKIACGLSHSALITSEGSLYTWGKGLDYQLGHGNKTERMEPHQVFEPNEVKWTNVSL 787
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G H++ D VY +G + GQ GV
Sbjct: 788 GNNHTIGSTDD---GSVYAWGKNEFGQCGV 814
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 40/168 (23%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ---------------------- 273
+ + +S + AA++ + L WG N+ + PQ
Sbjct: 407 DFLPLSGGNNCGAAIAEDDRLMIWGNFTNAQQRMEMPQINAKAKRSDSATNGTPAAPPPK 466
Query: 274 ---SLPSSLSF-----SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
LP L + A G H+LVL+ G++ GG+ HG +
Sbjct: 467 PEQQLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNKHGQCGVGH--------AF 518
Query: 326 ALEKVSNLDG--VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
L + +DG + +IA G HSA + + ++ T+GWG GQLG G
Sbjct: 519 RLANLQQIDGDWPSIEKIACGQFHSAFICSDGSLWTFGWGIWGQLGQG 566
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 131/292 (44%), Gaps = 40/292 (13%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
G HV+ALT+ GKVFS+G GQLGHG+ PK V R +T +
Sbjct: 74 GCEHVIALTN-----NGKVFSFGFNVKGQLGHGDQTSINSPKQVEALS--RKFVTAVGCS 126
Query: 135 WNHSGF-VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
+ H+ F +D +++CG +GQLG G+ +SP + + K + I CG HS+V
Sbjct: 127 YYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVV- 185
Query: 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
+ +++ FG GQLG++ ++SLP+ L +I A G
Sbjct: 186 --SSIDGEIFSFGRNDSGQLGITGSD-GNISLPKEVKNLKSTQI----ACGYYHTVAINN 238
Query: 254 GHLYTWGR--------GFNSTSDVNCPQSLPSSL------SFSQAALGWNHVLVLTGDGE 299
G LY+WG+ G S ++ LP+ + A G H L L G+
Sbjct: 239 GQLYSWGKNDSGQLGIGIYSAKEI-----LPTLVRDLEDQEIVSVACGCYHTLALGYAGQ 293
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
+ G + HG L D +S +PL + L KV QIAAG HS V+
Sbjct: 294 LFSFGRNSHGQLGDGTTNNSCKPLLI-----QGLIDKKVCQIAAGFYHSIVL 340
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 120/269 (44%), Gaps = 23/269 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+S+G GQLG G SP+ + S V+ + C H T S +++
Sbjct: 86 KVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYH----TIFSCADEMEIY 141
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S GR GQLG G + D P + +G R I I G HS S G +F+ G
Sbjct: 142 SCGRNDYGQLGLGNLDDKNSPTLIEALNGKR--IVSIGCGQYHSVVSSIDGEIFSFGRND 199
Query: 155 FGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + S P +V N QIACG H++ + Q+Y +G GQL
Sbjct: 200 SGQLGITGSDGNISLPKEVK---NLKSTQIACGYYHTVAI----NNGQLYSWGKNDSGQL 252
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSD 268
G+ + + LP + L D EIV ++ + AL G L+++GR + T++
Sbjct: 253 GIGIYSAKEI-LPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTN 311
Query: 269 VNCPQSLPSSL---SFSQAALGWNHVLVL 294
+C L L Q A G+ H +VL
Sbjct: 312 NSCKPLLIQGLIDKKVCQIAAGFYHSIVL 340
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 141/328 (42%), Gaps = 23/328 (7%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGG------KVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
+V +A G H L LT V G S G + Q + K V
Sbjct: 2 NVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKL 61
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
G S G H ++++G +F+ G GQLGHGD S +SP +V + K V
Sbjct: 62 RGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVT 121
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
+ C H++ D + ++Y G GQLG+ + + P + L+ IV I
Sbjct: 122 AVGCSYYHTIFSCADEM--EIYSCGRNDYGQLGLGN--LDDKNSPTLIEALNGKRIVSIG 177
Query: 242 ANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
S S +G ++++GR + S +++ P+ + +L +Q A G+ H + +
Sbjct: 178 CGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVK-NLKSTQIACGYYHTVAI 236
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+G++ G + G L + S + + L V +L+ +++ +A G H+ +
Sbjct: 237 N-NGQLYSWGKNDSGQLGIG--IYSAKEILPTL--VRDLEDQEIVSVACGCYHTLALGYA 291
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ ++G HGQLG G T + P ++
Sbjct: 292 GQLFSFGRNSHGQLGDGTTNNSCKPLLI 319
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 18/220 (8%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++S G GQLG G L D+ SP L+ + + + CG H S S I G++
Sbjct: 138 MEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYH-----SVVSSIDGEI 192
Query: 94 FSWGRGSSGQLG-HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FS+GR SGQLG G + PK V T I+ G+ H+ + ++G L++ G
Sbjct: 193 FSFGRNDSGQLGITGSDGNISLPKEVKNLKS-----TQIACGYYHTVAI-NNGQLYSWGK 246
Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GQLG G Y + P V ++ + +ACG H+L L Q++ FG G
Sbjct: 247 NDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLAL---GYAGQLFSFGRNSHG 303
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
QLG + P + GL D ++ I+A S L+
Sbjct: 304 QLG--DGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLA 341
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 35 KVWSWGAGTDGQLG-TGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++S+G GQLG TG + L ++ NL S + +ACG H +A+ + G+
Sbjct: 191 EIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS----TQIACGYYHTVAINN------GQ 240
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++SWG+ SGQLG G + A P D I ++ G H+ + +G LF+ G
Sbjct: 241 LYSWGKNDSGQLGIG-IYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGR 299
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
+ GQLG G + P+ + ++K V QIA G HS+VL + N
Sbjct: 300 NSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLANPVIRN 347
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 173/391 (44%), Gaps = 48/391 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WGA D QLG + SPQ + + + +++ +ACG H L L + G+V
Sbjct: 9 LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNA-----DGEV 63
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+S G GQLG + + +T + H TIT I+ G H+ +S +G LFT G
Sbjct: 64 YSCGGNEFGQLGRSDSPSDF--RRITALENH--TITDIACGAYHNAAISYTGRLFTWGCN 119
Query: 154 TFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG GD SS + S V Q++ G+ HSLVL ++++ FGS GQ
Sbjct: 120 SNGQLGREGD---DSSVKMIRSLAEHRVVQVSLGLEHSLVLTDT---SRLFVFGSNIWGQ 173
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNST 266
LG+ + +PQ + L + I ISA G SA L+ G LY WG G
Sbjct: 174 LGLGFRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTISGTLYVWGGNKYGQLGLEPI 233
Query: 267 SDVNCPQSLPSSLSFSQAA---------LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
V S S A LG + + + + GS + + P+
Sbjct: 234 ETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAE----TVSGSRSSIENAPQH- 288
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
S + P + V +L G + + + G H+ V+TE + T+G + GQLG G + +
Sbjct: 289 SVSVPTA-----VRSLKGQRAVFVDCGESHTVVLTEEGGVFTYGGNQFGQLGHGESSKSV 343
Query: 378 H-PKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
P+ V D N TQ V CG T +
Sbjct: 344 SIPRKV--ADLMDNPTTQ--VACGRMHTLVL 370
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 31/264 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG + + + S + + CG + P + + S
Sbjct: 217 LYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLGLEPIETVAAETVS 276
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
GS + + P V G R + G +H+ +++ G +FT G F
Sbjct: 277 ---GSRSSIENAPQHSVSVPTAVRSLKGQRAVF--VDCGESHTVVLTEEGGVFTYGGNQF 331
Query: 156 GQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGHG+ +S S P KV+ ++ Q+ACG H+LVL+ LG VY FG+G GQLG
Sbjct: 332 GQLGHGESSKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPS-LGC-VYAFGAGSEGQLG 389
Query: 215 VSKD----RIRSVSLPQVTIGLHD----------IEIVGISANGDRSAALSAEGHLYT-- 258
+ + R V P +T G +E+ + A GD + AL+ + + +
Sbjct: 390 TNTNTDSSRPTLVKGPWLTRGFSSNQSTNSPDVPLEVARLYAGGDHAYALTRKSTIKSQI 449
Query: 259 -------WGRGFNSTSDVNCPQSL 275
W + + CPQ+L
Sbjct: 450 IVEDFRVWDPMSSRSIATVCPQAL 473
>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
Length = 1012
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 166/374 (44%), Gaps = 80/374 (21%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + VS +ACG H +T + +VF+WG SG+LGHG
Sbjct: 248 DILVPKPLESNVMLDVSYVACGVKHAALVTRQA-----EVFTWGEECSGRLGHGAGTSIF 302
Query: 114 YPKPV---------TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYR 164
P+ V T G + + +S G H+ + SG L+T GDGTFG LGHG+
Sbjct: 303 QPRLVESLSICNVETLPVGLQ-VVKLLSCGTWHTALRTSSGKLYTFGDGTFGVLGHGNRE 361
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN------QVYGFGSGKRGQLGVSKD 218
+ S P +V S ++CG+ H+ +++ + +++ +G G + +LG
Sbjct: 362 TISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLG---- 417
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS- 277
+GDRS+ L P +PS
Sbjct: 418 ------------------------HGDRSSKLK--------------------PTCVPSL 433
Query: 278 -SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
+F +A G + LT G + G S +G L +P + R + EK L G
Sbjct: 434 IDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPN--NDGRYPRLVEEK---LGGG 488
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 396
V+++ GA H AV+T++ + TWG G +G+LG G+ D+ P V + ++R +
Sbjct: 489 GVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFV---EALRDRSVK-R 544
Query: 397 VFCGSGFTYAISRH 410
+ CGSGFT AI +H
Sbjct: 545 IACGSGFTAAICQH 558
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 113/249 (45%), Gaps = 29/249 (11%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSS----------LSSVSMLACGGAHVLALT 83
+V++WG G+LG G P+L+ S L V +L+CG H T
Sbjct: 280 AEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHTALRT 339
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV-- 141
S GK++++G G+ G LGHG YPK V G R TI+ W+ + V
Sbjct: 340 S-----SGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLR-TISVSCGVWHTAAVVEV 393
Query: 142 ------SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+ SG LFT GDG +LGHGD S P V S ++ N H+ CG H+L +
Sbjct: 394 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCG--HTLTIGL 451
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
G+ ++ GS GQLG + R L V L +V + A L+ G
Sbjct: 452 TTSGH-IFTAGSSVYGQLGNPNNDGRYPRL--VEEKLGGGGVVEVVCGAYHVAVLTQSGE 508
Query: 256 LYTWGRGFN 264
+YTWG+G N
Sbjct: 509 VYTWGKGAN 517
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
+V++WG G +G+LG G + D +P + SV +ACG A+ SV G
Sbjct: 508 EVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSG 563
>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
terrae PB90-1]
gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
PB90-1]
Length = 1848
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELS--PQLLNLSSL---SSVSMLACGGAHVLALTSPSS 87
V++WG +GQLG G L ++S P ++++ + ++ +A G H LAL S
Sbjct: 192 TVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASD-- 249
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT---FFDGHRYTITHISAGWNHSGFVSDS 144
G V++WG S GQLG G D+ P V G T+ I+AG NHS V+
Sbjct: 250 ---GIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGK--TVVAIAAGRNHSLAVASD 304
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKV--SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G ++ GD + QLG G S PV V + K+V +A G RHSL D V
Sbjct: 305 GTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASD---GTV 361
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTI----GLHDIEIVGISANGDRSAALSAEGHLYT 258
Y +G GQ+G D I + V++ L IV ++A G + AL+++G + T
Sbjct: 362 YAWGDNTNGQMG---DTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCT 418
Query: 259 WGRGFN-------------STSD--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
WG +N ST VN +LP + A G +H L L DG +
Sbjct: 419 WGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGA-GVSHSLALASDGALCTW 477
Query: 304 GGSHHGMLSDPERVSSTRPLSVA 326
G + G L D + T P++V+
Sbjct: 478 GFNSQGQLGDNSTTNRTVPVTVS 500
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 176/413 (42%), Gaps = 50/413 (12%)
Query: 37 WSWGAGTDGQLGTGRL----HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVI 89
++WG + GQLG G + + P + S + ++ LA H LAL S
Sbjct: 135 YAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASD---- 190
Query: 90 GGKVFSWGRGSSGQLGHGE--MVDALYPKPVTF-----FDGHRYTITHISAGWNHSGFVS 142
G V++WG ++GQLG+G + + PV G TI I+ G+ HS ++
Sbjct: 191 -GTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGK--TIIAIATGYEHSLALA 247
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS---FVNKNVHQIACGMRHSLVLLKDCLG 199
G ++ GD + GQLG G P+ V K V IA G HSL + D
Sbjct: 248 SDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASD--- 304
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYT 258
VY +G QLG SV +P L + + A GDR S A +++G +Y
Sbjct: 305 GTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAGKSVADV-AGGDRHSLAQASDGTVYA 363
Query: 259 WGRGFNSTSDVNCPQSLPSSLSFS-----------QAALGWNHVLVLTGDGEVLMLGGSH 307
WG N P+ +S + A G H L L DG V G ++
Sbjct: 364 WGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCTWGYNY 423
Query: 308 HGMLSDPERVS---STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+G L + + ST P +A+ L G ++ + AG HS + + A+ TWG+
Sbjct: 424 NGQLGNNSSGAGEKSTVP--IAVNSYGALPGKTIVAVGAGVSHSLALASDGALCTWGFNS 481
Query: 365 HGQLGLGNTCDQIHPKVVNLGD-EFQNRDTQLEVFCGSGFTYAISRHCLPSQT 416
GQLG +T ++ P V+ G FQ L C + ++ A++ P+ T
Sbjct: 482 QGQLGDNSTTNRTVPVTVSAGGLMFQ----ALGTTCDAVYSLALATVPPPTIT 530
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 22/266 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG + QLG G SP LL+ + + V +ACG H +ALT+ G+V++
Sbjct: 120 VYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTE-----GEVYT 174
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG + GQ+G G + P+ VT G++ I I+ G S V+DSG +++ G
Sbjct: 175 WGYNNCGQIGSGSTANQGSPRKVTACIGNK-RIIDITCGQTTSLCVTDSGEVYSWGYNGN 233
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G+ + ++P +V++ + Q+ CG H+L L + + V+G+G+ GQLG
Sbjct: 234 GQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGV---VFGWGANSYGQLG- 289
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
S ++ + + QV + + + + SAA + GH+Y WG+ + P+
Sbjct: 290 SGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWGQLRQQAT----PEPK 345
Query: 276 PSSLS--------FSQAALGWNHVLV 293
P++ + FS + W ++V
Sbjct: 346 PTNFTDLNAVFAGFSSPPVSWRAMIV 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 27/304 (8%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTC 150
KV+S G +SG LG G+ +L P+ + F G + I +SAG H ++ G +++
Sbjct: 66 KVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQK--IISLSAGSGPHVLVLTQDGGVYSW 123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G ++ QLG+G +SP +S ++ V QIACG HS+ L + +VY +G
Sbjct: 124 GHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTE---GEVYTWGYNNC 180
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQ+G S S +VT + + I+ I+ S ++ G +Y+WG N V
Sbjct: 181 GQIG-SGSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVG 239
Query: 270 -NCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
N Q+ P ++ +Q G+ H L LT +G V G + +G L + ++ P
Sbjct: 240 NNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTP 299
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L VA +V+ +AA + N++ + WG+ Q PK
Sbjct: 300 LQVATRI------GRVVCLAATHYSHSSAARNQSGHIYMWGQLRQQATP------EPKPT 347
Query: 383 NLGD 386
N D
Sbjct: 348 NFTD 351
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
+F Q+A V+ T D +V LG + G L + SS P + + G K+
Sbjct: 49 FTFGQSA---TEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEP-----RLLESFSGQKI 100
Query: 339 IQIAAGA-EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 397
I ++AG+ H V+T++ + +WG + QLG G T P + L N+ Q+
Sbjct: 101 ISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSL--LSRNISNKVVQIA- 157
Query: 398 FCGSGFTYAIS 408
CGS + A++
Sbjct: 158 -CGSHHSMALT 167
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 138/344 (40%), Gaps = 59/344 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG+ GQLG G P L+ S + + CG H LA+TS KV+S
Sbjct: 517 VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDY-----KVYS 571
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G GQLG + + L PK + D H+ + +AG+ HS ++ ++T G +
Sbjct: 572 WGWGVHGQLGLKSVENQLTPKQIDLLDSHK--VIQAAAGYAHSAVLTSQRYVYTFGADLY 629
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + P V S +++ I+CG
Sbjct: 630 GQLGIGSHYKQVIPQLVDSLTLDSIYLISCG----------------------------- 660
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS-TSDVNCPQS 274
P TI + + + + + A+ +GR S T D+N +
Sbjct: 661 ----------PFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLN-HRF 709
Query: 275 LPSSLSF------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P +L F +Q G H ++LT +V G + G L ++ + P
Sbjct: 710 YPETLQFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAP-----R 764
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
V L +I +A GAE S + IM WG + G++G+ N
Sbjct: 765 LVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGIEN 808
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 27/237 (11%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD--IEIVG 239
+IACG H + + ++Y +G + G KD +++ LP LH+ I++V
Sbjct: 449 RIACGRNHIAFVTNN---KELYTWGK----ECGGRKDNVQNTCLPMRMENLHNQGIQVVS 501
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGWNHV 291
++ + AL EG +Y+WG G T P + SS G H
Sbjct: 502 VACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHT 560
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
L +T D +V G HG L + P + L LD KVIQ AAG HSAV+
Sbjct: 561 LAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDL-----LDSHKVIQAAAGYAHSAVL 615
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
T R + T+G +GQLG+G+ Q+ P++V + D+ + CG T AIS
Sbjct: 616 TSQRYVYTFGADLYGQLGIGSHYKQVIPQLV----DSLTLDSIYLISCGPFETIAIS 668
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 43/298 (14%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGM 187
I+ G NH FV+++ L+T G G+ + ++ P+++ + N+ + +ACG
Sbjct: 449 RIACGRNHIAFVTNNKELYTWGKECGGR--KDNVQNTCLPMRMENLHNQGIQVVSVACGE 506
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H++ L ++ VY +GS + GQLGV R R P + + +IV + +
Sbjct: 507 FHTIALCEE----GVYSWGSNEYGQLGVGDTRTR--YRPVLITHISSKQIVSVVCGAYHT 560
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGE 299
A++++ +Y+WG G S + P+ L S QAA G+ H VLT
Sbjct: 561 LAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRY 620
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G +G L P + V +L + I+ G + ++E++ I
Sbjct: 621 VYTFGADLYGQLGIGSHYKQVIP-----QLVDSLTLDSIYLISCGPFETIAISEDQTIFC 675
Query: 360 WGWGEH-------------GQLGLGNTCD---QIHPKVVNLGDEFQNRDTQLEVFCGS 401
WG H G+ NT D + +P+ + +FQ + ++FCG+
Sbjct: 676 WGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETL----QFQLQHPITQIFCGN 729
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 103/244 (42%), Gaps = 28/244 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+SWG G GQLG + ++L+P+ ++L V A G AH LTS V+
Sbjct: 568 KVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQR-----YVY 622
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF------ 148
++G GQLG G + P+ V +I IS G + +S+ +F
Sbjct: 623 TFGADLYGQLGIGSHYKQVIPQLVDSLTLD--SIYLISCGPFETIAISEDQTIFCWGRNY 680
Query: 149 ----TCGDGTFGQLGH------GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
C + G D P + + + QI CG H ++L
Sbjct: 681 HQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTS--- 737
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
NQVY +G GQLG ++I S P++ L I+G++ + S A A+ ++
Sbjct: 738 VNQVYTWGYNDCGQLG-HYNKIDQ-SAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMA 795
Query: 259 WGRG 262
WGR
Sbjct: 796 WGRN 799
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
GQL ++ I+S S+ + I+ + A ++ LYTWG+ D
Sbjct: 421 GQLSLTNSLIKSDSISSNDLLFTSTPRARIACGRNHIAFVTNNKELYTWGKECGGRKDNV 480
Query: 271 CPQSLPSSLS--------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
LP + A G H + L +G V G + +G L + + RP
Sbjct: 481 QNTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRP 539
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ ++++ +++ + GA H+ +T + + +WGWG HGQLGL + +Q+ PK +
Sbjct: 540 V-----LITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQI 594
Query: 383 NLGD 386
+L D
Sbjct: 595 DLLD 598
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 158/358 (44%), Gaps = 43/358 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG G QLG G SP + + L SV +A GG+H LA+ S G V++
Sbjct: 60 VWAWGGG---QLGNGSTTG--SPAPVQVQDLHSVEAIAAGGSHNLAIKS-----DGTVWA 109
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQLG G P V +G R +I +A ++HS + G ++ G +
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQV---EGLR-SIVGAAAHYDHSLALKSDGTVWAWGRNEY 165
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G +PV+V +V I+ G +SL + D V+ +G + GQLG
Sbjct: 166 GQLGDGSKTDRHTPVRVKGL--DSVVAISSGFGYSLAVKSD---GTVWAWGKNEYGQLG- 219
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWGR------GFNSTSD 268
S P GLH + V A+GD + A+ +G +++WG G S D
Sbjct: 220 -NGSTTQSSAPVQVQGLHSVTAV---ASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMD 275
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P + S G+ H L L DG V G S+ P+
Sbjct: 276 RYTPVQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWG----FGSSTPV----- 326
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLG 385
+V LD V+ IAAG +HS V + + WG ++GQLG G + ++ P KV G
Sbjct: 327 QVQELD--SVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKVQGFG 382
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG + G G S + + L SV +A G H LA+ + G V++
Sbjct: 307 VWAWGNYQFNEWGFG------SSTPVQVQELDSVVDIAAGTQHSLAVRN-----DGTVWA 355
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRY------TITHIS 132
WG+ +GQLG G L P V F G + T+TH++
Sbjct: 356 WGKNDNGQLGDGTSTARLTPIKVQGFGGPEWPEGDVLTVTHVT 398
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 143/337 (42%), Gaps = 30/337 (8%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
SP+ + + + + CG H + + GK+FS+G GQLGH +
Sbjct: 24 SPRASPFTLVDDIVQVGCGENHTILVMK-----DGKLFSFGLNDYGQLGHCR--SRTRAE 76
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS-HSSPVKVSSF 175
PV + H IT ++ G H+ ++ G +F G + GQLG S +P V S
Sbjct: 77 PVDGLEAH--NITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL 134
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
K V QIACG HS+ L ++Y +GS GQLG+ P + L I
Sbjct: 135 ATKQVVQIACGRSHSMALTN---VGEIYCWGSNSHGQLGLGSSGTPETK-PCLVKLLQGI 190
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAAL--- 286
I IS D S A++ G +Y WG+ G T+D P L SL F +
Sbjct: 191 PISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQL-KSLRFQRVTYIRC 249
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G +H LT DG V G +G L + P KV L G V QI G
Sbjct: 250 GMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP-----RKVLELMGTTVTQICCGRC 304
Query: 347 HS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
H+ A V I +G G GQLG +T + P++V
Sbjct: 305 HTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 25/250 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG+ ++GQLG + +P+++ + V +ACG +H +ALT+ G++
Sbjct: 104 EVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNV-----GEI 158
Query: 94 FSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ WG S GQLG G P V G I+HIS G + S V+ SG ++ G
Sbjct: 159 YCWGSNSHGQLGLGSSGTPETKPCLVKLLQG--IPISHISCGADFSFAVTPSGAVYGWGK 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+FGQLG GD P ++ S + V I CGM H+ L +D V+ FG+G GQ
Sbjct: 217 NSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRD---GGVFTFGAGMYGQ 273
Query: 213 LG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG------RGF 263
LG S + + LP+ + L + I + A ++G +Y +G G
Sbjct: 274 LGHCTSANEM----LPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGT 329
Query: 264 NSTSDVNCPQ 273
ST++VN PQ
Sbjct: 330 KSTANVNSPQ 339
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++ WG+ + GQLG G E P L+ L +S ++CG A+T PS G V
Sbjct: 157 EIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVT-PS----GAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG+ S GQLG G+ D P+P +T+I G +H+ ++ G +FT G G
Sbjct: 212 YGWGKNSFGQLGLGDTTDR--PQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+GQLGH + P KV + V QI CG H+L + ++Y FG G GQL
Sbjct: 270 MYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPS--KGRIYAFGLGGSGQL 327
Query: 214 GVSKDRIRSVSLPQVTIG 231
G +V+ PQ+ IG
Sbjct: 328 GTKS--TANVNSPQLVIG 343
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 28/303 (9%)
Query: 93 VFSWGR----GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
+F WGR E++ + P T D I + G NH+ V G LF
Sbjct: 1 MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDD----IVQVGCGENHTILVMKDGKLF 56
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ G +GQLGH R+ + P V N+ Q+ACG +H+L ++ G +V+ +GS
Sbjct: 57 SFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGAQHTLA--QNEWG-EVFAWGSN 111
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG++ + + P++ L ++V I+ S AL+ G +Y WG
Sbjct: 112 SNGQLGLNVEE-SMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLG 170
Query: 262 -GFNSTSDVN-CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G + T + C L + S + G + +T G V G + G L +
Sbjct: 171 LGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+P ++ +L +V I G +H+A +T + + T+G G +GQLG + +++ P
Sbjct: 231 PQP-----TQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 34/257 (13%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
+SP + ++ Q+ CG H+++++KD +++ FG GQLG + R R+
Sbjct: 23 TSPRASPFTLVDDIVQVGCGENHTILVMKD---GKLFSFGLNDYGQLGHCRSRTRA---- 75
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP---------S 277
+ GL I ++ + A + G ++ WG N +N +S+ +
Sbjct: 76 EPVDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLA 135
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-----DPERVSSTRPLSVALEKVSN 332
+ Q A G +H + LT GE+ G + HG L PE T+P V L
Sbjct: 136 TKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPE----TKPCLVKL----- 186
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRD 392
L G+ + I+ GA+ S VT + A+ WG GQLGLG+T D+ P + FQ R
Sbjct: 187 LQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLK-SLRFQ-RV 244
Query: 393 TQLEVFCGSGFTYAISR 409
T + CG T A++R
Sbjct: 245 TYIR--CGMDHTAALTR 259
>gi|297268307|ref|XP_001083991.2| PREDICTED: tryptophan 5-hydroxylase [Macaca mulatta]
Length = 885
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 137/291 (47%), Gaps = 31/291 (10%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DG 153
G S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDIGDLFVCGLNKDG 506
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G LGH + + +P K S + Q+ACG +++L ++ QV GS GQL
Sbjct: 507 QLG-LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIILTEN---GQVLSCGSNSFGQL 560
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP- 272
GV R V +PQ I LH ++V I+A + A +A G ++ WG G S CP
Sbjct: 561 GVPHGPRRCV-VPQA-IELHKEKVVCIAAGLRHALAATASGIVFQWGTGLASCGRRLCPG 618
Query: 273 QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
Q+LP + L S+A G +H LT GEV + G + HG L+ +
Sbjct: 619 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATE---A 675
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ P+ +E KV + +G H TE + TWG ++GQLG
Sbjct: 676 AFLPVPQKIE-AHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLG 725
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 173/403 (42%), Gaps = 47/403 (11%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ LN SV + GG H +T G +F G
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDI-----GDLFVCGL 502
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQL
Sbjct: 503 NKDGQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIILTENGQVLSCGSNSFGQL 560
Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
G HG R P + K V IA G+RH+L + V+ +G+G +R
Sbjct: 561 GVPHGPRRC-VVPQAIELHKEKVVC-IAAGLRHALAATASGI---VFQWGTGLASCGRRL 615
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNST 266
G + + P GL + + + + A D SA+L+ G +Y WG
Sbjct: 616 CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLATEA 675
Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-------- 314
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 676 AFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEGWK 735
Query: 315 -ERVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
E+ S P S L + S+L + +++ G+EH+ V +WGW EHG G G
Sbjct: 736 LEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEHNLAVI-GGVCYSWGWNEHGMCGDG 794
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414
+ PK V + + L V CG+G + A+ + LP+
Sbjct: 795 TEANIWAPKPV----QALLSSSGLLVGCGAGHSLALCQ--LPA 831
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 36/147 (24%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSP--QLLN-----LSSLSSVSMLACGGAH 78
KV++WG GQLG D P +LLN L L+ + ++CG H
Sbjct: 712 KVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSLHCLTGATEVSCGSEH 771
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF-----------DGHRYT 127
LA VIGG +SWG G G G + PKPV GH
Sbjct: 772 NLA------VIGGVCYSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLA 825
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ + A H V D + D T
Sbjct: 826 LCQLPA---HPALVQDPKVTYLSPDAT 849
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 29/180 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + V+ + G H++A T GK
Sbjct: 659 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTE-----TGK 712
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYP-------KPVTFFDGHRYT-ITHISAGW 135
VF+WGR GQLG E D+ P P + H T T +S G
Sbjct: 713 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNNMPSSL---HCLTGATEVSCGS 769
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ V C ++ G G G G + +P V + ++ + + CG HSL L +
Sbjct: 770 EHNLAVIGGVC-YSWGWNEHGMCGDGTEANIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 828
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 129/302 (42%), Gaps = 44/302 (14%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G VF++G+ S D + P FF + I IS G HSG V +G +F
Sbjct: 11 GAVFTYGKSS--------FADNI---PSHFFIRNDPVI-EISCGEEHSGIVCKNGRVFCF 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +FGQLG G + P V S V IACG H++V ++ N VYGFG
Sbjct: 59 GKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTEN---NIVYGFGDNSD 115
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG S + +P +D I+ +SA +AAL G +Y WG G N
Sbjct: 116 GQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLN 175
Query: 265 STSD----VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS----DPER 316
S D V+ P +P +L + G H +T G++ G +G L R
Sbjct: 176 SMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWSLSR 235
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
V +T K+++++ GA H+ + + + G + GQ+GL N Q
Sbjct: 236 VDTTE---------------KIVKVSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQ 280
Query: 377 IH 378
H
Sbjct: 281 GH 282
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 21/161 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+++ G G+LG G L + + + ++CG H +AL GKVF
Sbjct: 215 LYTCGDREYGKLGHGLW------SLSRVDTTEKIVKVSCGANHTIALND-----AGKVFV 263
Query: 96 WGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
G GQ+G + LYP P+T I I G +HS F++ SG LF CGDG
Sbjct: 264 CGNNDCGQIGLRNVTSQGHLYPCPIT-----NEPIVQIVCGQSHSAFITASGKLFMCGDG 318
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNK--NVHQIACGMRHSLV 192
+G+LG D ++P V +FV+K NV ++CG H+L+
Sbjct: 319 KYGKLGI-DVNQITTPTLVLAFVDKNLNVQMVSCGGNHTLI 358
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ +G + GQLG G + P + V +ACG +H + T + V G
Sbjct: 54 RVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYG---- 109
Query: 95 SWGRGSSGQLGH--GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+G S GQLG ++ + P VT F+ I +SAG H+ + ++G ++ G
Sbjct: 110 -FGDNSDGQLGQSVADVTHSDVPIEVTRFNDK--NIIQLSAGSYHTAALLENGDVYVWGS 166
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG S V V + V V ++CG H+ + + +G+ +Y G +
Sbjct: 167 NSDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTR--IGD-LYTCGDREY 223
Query: 211 GQLG---------VSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAA----LSAEGHL 256
G+LG + ++I VS TI L+D V + N D ++++GHL
Sbjct: 224 GKLGHGLWSLSRVDTTEKIVKVSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQGHL 283
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
Y CP ++ Q G +H +T G++ M G +G L
Sbjct: 284 YP------------CPI---TNEPIVQIVCGQSHSAFITASGKLFMCGDGKYGKL 323
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
VI+I+ G EHS +V +N + +G GQLGLG+T + P V
Sbjct: 36 VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCV 80
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 166/356 (46%), Gaps = 60/356 (16%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFF---------------------DGHRYTITH 130
++ SWGRG+SGQLG G LYP PV + T
Sbjct: 36 QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI---ACGM 187
IS G HS V D G L+ G G G+LG G P +N N+ I A G
Sbjct: 96 ISCGLFHSSLVVD-GKLWIWGKGDGGRLGFGQEYPAFLPT-----LNPNLDSIRSTALGG 149
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
HS+ L LG QV+ +G G G LG S R + LP++ G + +I I+ G +
Sbjct: 150 VHSVAL--SSLG-QVFTWGYGGFGALGHSVYH-REL-LPRMVEGSWNAKIRHIATAGTHT 204
Query: 248 AALSAEGHLYTWGR---------GFNSTSDVNCPQSLPS---SLSFSQAAL--GWNHVLV 293
AA++ G LYTWGR G N + S+PS +L AA+ G +V
Sbjct: 205 AAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMV 264
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
LT +G++ G + + L ++V +P + + +L V++IQIA+G HS +T+
Sbjct: 265 LTQEGQLWNWGANSNYELGRGDKVGGWKP-----QPIPSLQDVRIIQIASGGYHSLALTD 319
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAIS 408
+ +++WG+G+HGQLG + +Q P V+ L DE + + CG + AI+
Sbjct: 320 DGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEH-----VIYIACGGSSSAAIT 370
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 160/385 (41%), Gaps = 61/385 (15%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTG----RLHDE--------------------LSPQL 60
+ E + V++ SWG G GQLG G RL+ P +
Sbjct: 26 KAENDAVTTVQLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSV 85
Query: 61 LNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF 120
N S L+ V ++CG H S V+ GK++ WG+G G+LG G+ A P
Sbjct: 86 ENASGLTEVG-ISCGLFH------SSLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPN 138
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
D R T + G HS +S G +FT G G FG LGH Y P V N +
Sbjct: 139 LDSIRST----ALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKI 194
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGK-RGQLGV----SKDRIRSVSLPQVTIGLHDI 235
IA H+ + + ++Y +G + G+LG+ + +S+P L +
Sbjct: 195 RHIATAGTHTAAITES---GELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKAL-PV 250
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN--------CPQSLPS--SLSFSQAA 285
+ +S G + L+ EG L+ WG NS ++ PQ +PS + Q A
Sbjct: 251 PVAAVSCGGFFTMVLTQEGQLWNWGA--NSNYELGRGDKVGGWKPQPIPSLQDVRIIQIA 308
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G H L LT DG+VL G HG L + P + L VI IA G
Sbjct: 309 SGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIP-----TVIEALADEHVIYIACGG 363
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGL 370
SA +T+N + WG + QLG+
Sbjct: 364 SSSAAITDNGKLYMWGNAKDSQLGV 388
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 46/348 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+W WG G G+LG G+ + P L +L S+ A GG H +AL+S G+VF
Sbjct: 110 KLWIWGKGDGGRLGFGQEYPAFLPTL--NPNLDSIRSTALGGVHSVALSSL-----GQVF 162
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC---- 150
+WG G G LGH L P+ V I HI+ H+ +++SG L+T
Sbjct: 163 TWGYGGFGALGHSVYHRELLPRMVE--GSWNAKIRHIATAGTHTAAITESGELYTWGRDQ 220
Query: 151 GDGTFG---QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
GDG G G + S P KV + + V ++CG ++VL ++ Q++ +G+
Sbjct: 221 GDGRLGLGPNCGPNEGGGLSIPSKVKA-LPVPVAAVSCGGFFTMVLTQE---GQLWNWGA 276
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----F 263
+LG D++ PQ L D+ I+ I++ G S AL+ +G + +WG G
Sbjct: 277 NSNYELG-RGDKVGGWK-PQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQL 334
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVL----------VLTGDGEVLMLGGSHHGMLSD 313
+S N Q +P+ + AL HV+ +T +G++ M G + L
Sbjct: 335 GHSSIEN--QKIPTVIE----ALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV 388
Query: 314 PERVSSTRPLSVALEKVSNLDGV---KVIQIAAGAEHSAVVTENRAIM 358
P + T+PL V ++ + D + V+ +A GA H+ + + +
Sbjct: 389 PG-LPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLVSSLCLF 435
>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
Length = 394
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 166/379 (43%), Gaps = 47/379 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN--LSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++++WGA + GQLG G D L PQL+ + + + ++ GG H A+T G
Sbjct: 10 RLFAWGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTD-----AGH 64
Query: 93 VFSWGRGSSGQLGHGEMVD----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
V+ G+ S GQLG D +L P +T ++ ++ GW+ + ++DSG L
Sbjct: 65 VYVCGQNSEGQLGLNHTTDVTHFSLCPGTLTL------RVSKVACGWDFTLILTDSGELL 118
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+CG T+ QLG P + + V +A G+RH L L + Q++ +GSG
Sbjct: 119 SCGANTYSQLGRAGEERSCIPRPL-DIQKRKVLDVAAGLRHVLALTDN---GQIFQWGSG 174
Query: 209 -----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG- 262
+R + S + P G++ I ++A ALS G +Y WG
Sbjct: 175 LASHARRFSQQKPIPAVYSSTEPCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNK 234
Query: 263 ----FNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+S + P + + L + + GW H++ T G+V G +++ L P
Sbjct: 235 HGQLLHSDPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRP 294
Query: 315 ERVSSTRPLSVALEKVS---------NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
T L+ +S +L G Q+A G+EH+ V + +WGW EH
Sbjct: 295 PNSEGTGLHETVLQGISANQLPAWIPSLTGSS--QVACGSEHNLAVCGG-LLYSWGWNEH 351
Query: 366 GQLGLGNTCDQIHPKVVNL 384
G G G+ + P +V +
Sbjct: 352 GMCGNGSETNVPVPTLVGI 370
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 22/220 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG GQLG G +PQL+ ++ + CG H+ A+T G+V+
Sbjct: 232 RLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQ-----GEVY 286
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
SWG G GQLGHG + L+PK + F I ++ G N + S G L+ G G
Sbjct: 287 SWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGE 346
Query: 155 FGQLG------HGDY------RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+GQLG H D+ +S P+ V S K + +ACG H++V+ + N+V
Sbjct: 347 YGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDE---NEV 403
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
Y +G G G LG+ R + V PQ+ L EI I+A
Sbjct: 404 YQWGWGSSGALGLGNKRFQLV--PQLITSLSGEEIASITA 441
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G++++WG GQLG G P+ V T D I + G H ++D G +++
Sbjct: 231 GRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLID---VNIVSVVCGRQHICAITDQGEVYS 287
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G G FGQLGHG+ +S+ P K+ FV N+ + Q+ACG ++V + +Y FG
Sbjct: 288 WGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMV---RSVQGLLYAFGH 344
Query: 208 GKRGQLGVS----------KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
G+ GQLG + +D S+P V L +I ++ + ++ E +Y
Sbjct: 345 GEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVY 404
Query: 258 TWGRG 262
WG G
Sbjct: 405 QWGWG 409
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 138/346 (39%), Gaps = 52/346 (15%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V S G+ +GQLGH + + L P + G R I +G HS VS G +++ G
Sbjct: 3 VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKR--IIQTVSGEAHSLAVSRFGDVYSWGR 60
Query: 153 GTFGQLGHGD-------YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
GQLG G + P + S ++ + ++ACG HSL L +G +VY +
Sbjct: 61 SKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTD--MG-KVYEW 117
Query: 206 GSGKR-----GQLGV------------SKDRIRSVSLPQVTIGLHDIEIVGISANG---- 244
G R L + S RI S+ Q G E ANG
Sbjct: 118 GQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSG----EKKAYDANGGTKP 173
Query: 245 -----DRSAALSAEGHLYTWGRGFNSTSDVNCP-QSLPSSLSFSQAALGWNHVLVLTGDG 298
D+ A+ SA+ G+ + + Q +P + + GW +T G
Sbjct: 174 KDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVV--DVSGGWAFSAAVTKSG 231
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ G + G L R + P + V L V ++ + G +H +T+ +
Sbjct: 232 RLYTWGFNEKGQLGLGNRWFHSTP-----QLVKTLIDVNIVSVVCGRQHICAITDQGEVY 286
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
+WG G GQLG GN +HPK + E R Q V CGS FT
Sbjct: 287 SWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQ--VACGSNFT 330
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 49/280 (17%)
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G+++D P+ D + +S GW S V+ SG L+T G GQLG G+ H
Sbjct: 194 GKIIDLNQTIPMQIQDIPE-EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFH 252
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S+P V + ++ N+ + CG +H + +VY +G G GQLG ++S P
Sbjct: 253 STPQLVKTLIDVNIVSVVCGRQHICAITDQ---GEVYSWGLGVFGQLG--HGNVKSYLHP 307
Query: 227 ---QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQ 283
Q + L++ I ++ + + S +G LY +G G
Sbjct: 308 KKIQQFVELNE-RIAQVACGSNFTMVRSVQGLLYAFGHG-------------------EY 347
Query: 284 AALGWNHVLVLTGDGEVLMLGG-SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
LG T + + L GG +H S P V S L+ K+ +A
Sbjct: 348 GQLGS------TEETQHLDFGGRDNHFKYSIPIVVKS-------------LETKKIKNVA 388
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
G H+ VVT+ + WGWG G LGLGN Q+ P+++
Sbjct: 389 CGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLI 428
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 156/351 (44%), Gaps = 34/351 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+ G + GQLG G P + + LS V +A GG H LA+ S G V++
Sbjct: 31 VWAVGGNSVGQLGDGTTSLRRVP--VRVLGLSGVVTVAAGGGHSLAVHSD-----GTVWA 83
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SSGQLG G + P V G + ++AG HS VS G ++ G+ +
Sbjct: 84 WGNNSSGQLGDGSFDNRAEPVRVRGLSG----VVAVAAGGYHSLAVSADGTVWAWGNNSS 139
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G + + + PV+V HSL + D + ++ +G GQLG
Sbjct: 140 GQLGDGSFDNRAEPVRVRGSSGVVAVAAGG--AHSLAVRSDGI---LWAWGDNLYGQLG- 193
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------FNSTSD 268
++ S QV L V +SA + S A+SA+G ++ WG +T
Sbjct: 194 NRGEFNSSEPVQV---LRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPL 250
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
++ P +P A G NH L + DG V G + HG L + V ++ P
Sbjct: 251 LSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEP-----G 305
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+V L+GV +AAG+ HS V ++ + WG GQ G G T P
Sbjct: 306 RVPGLEGVGA--VAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAP 354
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 159/355 (44%), Gaps = 36/355 (10%)
Query: 36 VWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLG G + Q+L ++ +VS G H LA+++ G V+
Sbjct: 181 LWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVS---AGANHSLAVSAD-----GTVW 232
Query: 95 SWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG S GQLG L P V G ++AG NHS V D G ++ G
Sbjct: 233 AWGDNSHGQLGIARTTPLLSIPGRVPEVRGS----VAMAAGDNHSLAVRDDGTVWAWGSN 288
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG+G +S P +V + V +A G HSL + D V+ +GS GQ
Sbjct: 289 GHGQLGNGFMVDNSEPGRVPGL--EGVGAVAAGSNHSLAVRDD---GTVWAWGSNVEGQR 343
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G +S P T +VG++AN S A+SA+G + WG G ST
Sbjct: 344 G--DGTTGQLSAP--TRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTR 399
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P + A G +H L L DG VL G + G L D R S + P
Sbjct: 400 NSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVP----- 454
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V L G V+ +AAG+ HS + + + TWG+ +GQLG G T + P V
Sbjct: 455 AQVRGLRG--VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTYRYEPVAV 507
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 154/357 (43%), Gaps = 38/357 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG + GQLG G + P + + LS V +A GG H LA+++ G V++
Sbjct: 81 VWAWGNNSSGQLGDGSFDNRAEP--VRVRGLSGVVAVAAGGYHSLAVSAD-----GTVWA 133
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG SSGQLG G + P V G + HS V G L+ GD +
Sbjct: 134 WGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGA----HSLAVRSDGILWAWGDNLY 189
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG+ + S PV+V ++ G HSL + D V+ +G GQLG+
Sbjct: 190 GQLGNRGEFNSSEPVQVLRVTGGVT--VSAGANHSLAVSAD---GTVWAWGDNSHGQLGI 244
Query: 216 SKDRIRSVSLPQVTIGLHDIEI---VGISANGDRSAALSAEGHLYTWGR------GFNST 266
++ + P ++I E+ V ++A + S A+ +G ++ WG G
Sbjct: 245 AR------TTPLLSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFM 298
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
D + P +P A G NH L + DG V G + G D +T LS
Sbjct: 299 VDNSEPGRVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGD----GTTGQLSAP 354
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
V+ +AA HS V+ + + WG HG+LG G+T + P V+
Sbjct: 355 TRVPGV---SGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRNSPAPVRVD 408
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 156/351 (44%), Gaps = 31/351 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW+WG+ +GQ G G +P + +S V +A H LA+++ G ++
Sbjct: 332 VWAWGSNVEGQRGDGTTGQLSAPT--RVPGVSGVVGVAANVFHSLAVSAD-----GSAWA 384
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG S G+LG G ++ P PV DG + + ++AG +HS + G + GD TF
Sbjct: 385 WGHNSHGELGDGSTRNS--PAPVRV-DGLKEVVA-VAAGSSHSLALLADGTVLAWGDNTF 440
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG G SHS P +V + V +A G HSL LL D V+ +G GQLG
Sbjct: 441 GQLGDGTRASHSVPAQVRGL--RGVVAVAAGSSHSLALLAD---GTVWTWGYNLNGQLGD 495
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275
R P GL +V ++A G+ S A+ ++G + WG S
Sbjct: 496 GTTTYR--YEPVAVKGLEG--VVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSR 551
Query: 276 PSSLSFSQAALGWNHV----LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P+ + AA L + DG G + G L D +++RP+ + ++
Sbjct: 552 PAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGS--TTSRPMPMRVQGAG 609
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+V+ +AAG HS ++ + WG GQLG G ++ P V
Sbjct: 610 -----EVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLAPTRV 655
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 150/333 (45%), Gaps = 42/333 (12%)
Query: 62 NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
+L + + + +A GG+H L++ G V++ G S GQLG G P V
Sbjct: 5 SLGAARAPARIATGGSHSLSVHQD-----GTVWAVGGNSVGQLGDGTTSLRRVPVRVLGL 59
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
G + ++AG HS V G ++ G+ + GQLG G + + + PV+V V
Sbjct: 60 SG----VVTVAAGGGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGL--SGVV 113
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK--DRIRSVSLPQVTIGLHDIEIVG 239
+A G HSL + D V+ +G+ GQLG +R V + + +V
Sbjct: 114 AVAAGGYHSLAVSAD---GTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSS------GVVA 164
Query: 240 ISANGDRSAALSAEGHLYTWG---------RG-FNSTSDVNCPQSLPSSLSFSQAALGWN 289
++A G S A+ ++G L+ WG RG FNS+ V + + ++ S A N
Sbjct: 165 VAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLR-VTGGVTVSAGA---N 220
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L ++ DG V G + HG L ++ T PL +V + G + +AAG HS
Sbjct: 221 HSLAVSADGTVWAWGDNSHGQLG----IARTTPLLSIPGRVPEVRGS--VAMAAGDNHSL 274
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
V ++ + WG HGQLG G D P V
Sbjct: 275 AVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRV 307
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W+WG + GQLG G P + + V +A G H LAL SP G V++W
Sbjct: 581 WAWGNNSSGQLGDGSTTSR--PMPMRVQGAGEVVAVAAGNGHSLAL-SPE----GGVWAW 633
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G+ + GQLG G + L P V G + S V D G +++ GD FG
Sbjct: 634 GQNARGQLGEGTLDRRLAPTRVQGLSGVVAVAAGGA----FSLAVRDDGSVWSWGDNAFG 689
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNV 180
QLG+ +P ++FV +++
Sbjct: 690 QLGN-------APPVYATFVVRSL 706
>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1044
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 165/388 (42%), Gaps = 78/388 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG + G++G P+++ + V +A G H A+T + G++
Sbjct: 284 EVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVT-----VSGELI 338
Query: 95 SWGRGSS-GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
WG G GQL K + DG ++ I+ G H+ ++ SG L+T GDG
Sbjct: 339 EWGEGPYMGQLDSYARNQWFPHKLFSPLDG--ISVVKIACGPWHTAIITSSGQLYTYGDG 396
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK---DCLGN----QVYGFG 206
TFG LGHGD + + P +V S V +ACG H+ +++ D N +++ +G
Sbjct: 397 TFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWG 456
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
RG+LG + +++ + P L D +
Sbjct: 457 DADRGKLGHADKKMKLI--PTCVDSLTDYD------------------------------ 484
Query: 267 SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
F Q + G + L+ G V G S HG L +P T
Sbjct: 485 --------------FIQVSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKT------ 524
Query: 327 LEKVSNLDGVK----VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
VS ++G+ V I++G+ H AVVT N + TWG G+ GQLGLG+ ++ P +V
Sbjct: 525 ---VSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLV 581
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRH 410
D + R + + CG +T A+ H
Sbjct: 582 ---DALEGRHVE-SLSCGYNYTAAVCLH 605
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WGA GQLG P L+L ++ VS +CGG H L L+ GKVFS
Sbjct: 14 VYTWGANFFGQLGRDYSRLWSLPSELHLPNVFVVSA-SCGGMHTLLLSKE-----GKVFS 67
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G++G+LGHG + P+P+ + R IT I+AGW HS + D G LFT G G
Sbjct: 68 FGDGANGRLGHGNCRNYSLPQPIASLESKR--ITFIAAGWTHSMAIDDDGKLFTWGCGNA 125
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ P V + + HS V C V+ +G G+ GQL
Sbjct: 126 GRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVC---CENGTVWTWGLGEHGQL 182
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
GV + ++ ++ IV +S G +AA++ +G L TWGRG
Sbjct: 183 GVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRG 231
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 19/246 (7%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
H+ VS G ++T G FGQLG R S P ++ N V +CG H+L+L K+
Sbjct: 4 HAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELH-LPNVFVVSASCGGMHTLLLSKE 62
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+V+ FG G G+LG R+ SLPQ L I I+A S A+ +G L
Sbjct: 63 ---GKVFSFGDGANGRLG--HGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKL 117
Query: 257 YTWG------RGFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGS 306
+TWG G + DV P+ + A+ ++H V +G V G
Sbjct: 118 FTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLG 177
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
HG L S P+ V +NL +++++ G H+A VT + ++TWG G+ G
Sbjct: 178 EHGQLGVGSTESHLEPVLVKSMADANL---HIVEVSCGGAHTAAVTNDGTLLTWGRGDWG 234
Query: 367 QLGLGN 372
QLG GN
Sbjct: 235 QLGHGN 240
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV+S+G G +G+LG G + PQ + ++ +A G H +A+ GK+F
Sbjct: 64 KVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDD-----GKLF 118
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG G++G+LGHG ++D P+ V R S ++HS ++G ++T G G
Sbjct: 119 TWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGE 178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G SH PV V S + N+H +++CG H+ + D + +G G GQ
Sbjct: 179 HGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTND---GTLLTWGRGDWGQ 235
Query: 213 LG 214
LG
Sbjct: 236 LG 237
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
VY +G+ GQLG +D R SLP + L ++ +V S G + LS EG ++++G
Sbjct: 13 DVYTWGANFFGQLG--RDYSRLWSLPS-ELHLPNVFVVSASCGGMHTLLLSKEGKVFSFG 69
Query: 261 RGFN------STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G N + + + PQ + S S + A GW H + + DG++ G + G L
Sbjct: 70 DGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLG 129
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ RP V +++ + +K + + +HSAV EN + TWG GEHGQLG+G+
Sbjct: 130 HGNVLDVWRPRFV--DRLYRIR-MKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGS 186
Query: 373 TCDQIHPKVVNLGDEFQNRDTQL---EVFCGSGFTYAIS 408
T + P +V D L EV CG T A++
Sbjct: 187 TESHLEPVLVK-----SMADANLHIVEVSCGGAHTAAVT 220
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG G G+LG G + D P+ ++ L + +M+A G A+ + G V
Sbjct: 116 KLFTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCEN----GTV 171
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG G GQLG G L P V I +S G H+ V++ G L T G G
Sbjct: 172 WTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRG 231
Query: 154 TFGQLGHGD 162
+GQLGHG+
Sbjct: 232 DWGQLGHGN 240
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 147/347 (42%), Gaps = 35/347 (10%)
Query: 39 WGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG+ GQLG G P+ + + +ACG H L L G V++ G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLH-----DGSVYTCG 59
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
S GQLGH + P+ V D + I+ +S G HS V++ G +F G G GQ
Sbjct: 60 SNSCGQLGHDK--GGSRPELVGALDAQK--ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115
Query: 158 LGHGDYRSHSSPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
LG G + V+V + K + Q+ CG H + L KD Q++ +G GQL
Sbjct: 116 LGLG---TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKD---GQLFVWGENSSGQL 169
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G+ K ++S PQ L I + ISA GD S ALS G ++ WG+ G N
Sbjct: 170 GLGKGEPSTLS-PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQ 228
Query: 268 D--VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D V C S + G H LT +G + G G L + P
Sbjct: 229 DRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP--- 285
Query: 326 ALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG 371
+V L G +V QIA G H+ A V I +G GQLG G
Sbjct: 286 --RRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 33/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG +GQLG G +++ P+ FDG + ++ G HS F+ G ++TCG
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGR--GLKEVACGNQHSLFLLHDGSVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLGH + S P V + + + ++CG HSL + + QV+ +G+G G
Sbjct: 60 SNSCGQLGHD--KGGSRPELVGALDAQKISGVSCGQAHSLAVNEQ---GQVFAWGAGDGG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ +V +P++ L + I + ALS +G L+ WG NS+ +
Sbjct: 115 QLGLGTAE-EAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGE--NSSGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS+LS +Q + G +H L+ G V G + G L +
Sbjct: 172 GKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRA 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P + L KV+ I+ G EH+A +T+ + T+G G GQLG +T ++ P+
Sbjct: 232 VPCHIKF-----LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPR 286
Query: 381 VVN--LGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R+ L +G YA
Sbjct: 287 RVMELMGTEVSQIACGRNHTLAFVPSTGLIYAF 319
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 119/229 (51%), Gaps = 15/229 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WGAG GQLG G + + P+L+ +S + CG H +AL+ G++
Sbjct: 104 QVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK-----DGQL 158
Query: 94 FSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F WG SSGQLG G+ L P+P+ G +T ISAG +HS +S SG +F G
Sbjct: 159 FVWGENSSGQLGLGKGEPSTLSPQPLKSLCG--IPLTQISAGGDHSFALSFSGAVFGWGK 216
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG D + + P + ++ V I+CG H+ L K+ ++ FG+G +GQ
Sbjct: 217 NSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKE---GGLFTFGNGSKGQ 273
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTWG 260
LG D R+ LP+ + L E+ I+ + + A + G +Y +G
Sbjct: 274 LG--HDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFG 320
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++ WG + GQLG G+ LSPQ L ++ ++ GG H AL+ G V
Sbjct: 157 QLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALS-----FSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG+ S+GQLG + D P + F + + +IS G H+ ++ G LFT G+G
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK--VVYISCGEEHTAALTKEGGLFTFGNG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH R+ P +V + V QIACG H+L + +Y FG +GQL
Sbjct: 270 SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPS--TGLIYAFGCNTQGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 38/337 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V++ G+ + GQLG HD+ P+L+ +S ++CG AH LA+ G+V
Sbjct: 55 VYTCGSNSCGQLG----HDKGGSRPELVGALDAQKISGVSCGQAHSLAVNE-----QGQV 105
Query: 94 FSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG G GQLG G +A+ P+ + HR I+ + G +H +S G LF G+
Sbjct: 106 FAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR--ISQVMCGNHHCIALSKDGQLFVWGE 163
Query: 153 GTFGQLGHGD-YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G S SP + S + QI+ G HS L V+G+G G
Sbjct: 164 NSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL---SFSGAVFGWGKNSAG 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
QLG++ ++ R+V P L ++V IS + +AAL+ EG L+T+G G +S
Sbjct: 221 QLGLNDEQDRAV--PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS 278
Query: 266 TSDVNCPQSLPSSL--SFSQAALGWNHVLVLT-GDGEVLMLGGSHHGML--------SDP 314
T + P+ + + SQ A G NH L G + G + G L P
Sbjct: 279 TRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSP 338
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
VS+ +PL + + + + +I +G +H+ ++
Sbjct: 339 VPVSNIQPLCIG-NAYTRTEHCTIAKIHSGGDHNFLL 374
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 25/264 (9%)
Query: 156 GQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G S P F + + ++ACG +HSL LL D VY GS GQLG
Sbjct: 11 GQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHD---GSVYTCGSNSCGQLG 67
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTS 267
K R P++ L +I G+S S A++ +G ++ WG G +
Sbjct: 68 HDKGGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEE 123
Query: 268 DVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
V P+ + SQ G +H + L+ DG++ + G + G L + P ++
Sbjct: 124 AVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLG----LGKGEPSTL 179
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+ + + +L G+ + QI+AG +HS ++ + A+ WG GQLGL + D+ P +
Sbjct: 180 SPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHI--- 236
Query: 386 DEFQNRDTQLEVFCGSGFTYAISR 409
+F + + CG T A+++
Sbjct: 237 -KFLRSQKVVYISCGEEHTAALTK 259
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 154/337 (45%), Gaps = 44/337 (13%)
Query: 93 VFSWGRGSSGQLGHGE--------MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
V +WG G GQLG G +V+AL P Y + + +G +S + D
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEP----------YAVRSVVSGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ + P +V + N + Q A G H L + + Y
Sbjct: 57 GTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ---GRAY 113
Query: 204 GFGSGKRGQLGVS--KDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+G + GQ G KD + R + +P+ + + ++A G S L+ EGH+
Sbjct: 114 AWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCA--PKLVVRQVAAGGTHSVVLTREGHV 171
Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
++WG+ + ++ P + + A+G H L L +G + G + +G L
Sbjct: 172 WSWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTG 231
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT- 373
+ ++P+ V LD + ++ IAAG HS +T+ + WG GEHG+LG G+
Sbjct: 232 DTQPRSQPIPV-----QGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDND 286
Query: 374 -CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL D ++V CG + A++R
Sbjct: 287 KSSKMLPQKVNL---LAGEDI-IQVSCGGTHSVALTR 319
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 166/399 (41%), Gaps = 51/399 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ ++ +V + G + LA+ G +F+WG
Sbjct: 9 AWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICD-----DGTLFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHPPETKTENIPSQVKALANVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSH-SSPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + P++ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTRE---GHVWSWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
Q D I+ +S+P GL ++ ++ + A + AL G L+ WG G T
Sbjct: 176 --QPWPPGD-IKQISIPVRVQGLENVRLIAVGAF--HNLALEENGTLWAWGNNEYGQLGT 230
Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
D P+S P SL+ A G H LT GEV G HG L + S+
Sbjct: 231 GDTQ-PRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSS 289
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD----- 375
+ L +KV+ L G +IQ++ G HS +T + I ++G G+HG+LG G
Sbjct: 290 KMLP---QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVTTGQPL 346
Query: 376 ----QIHPKVVNLGDEFQNRDTQL---EVFCGSGFTYAI 407
+I P D ++ D + V CG T AI
Sbjct: 347 DVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRHTLAI 385
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 149/349 (42%), Gaps = 51/349 (14%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WG G LG E P + + + A GG H LA+ G+ +
Sbjct: 59 LFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ-----GRAY 113
Query: 95 SWGRGSSGQLGH----GEM-----VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
+WG GQ G EM D + PK + + ++AG HS ++ G
Sbjct: 114 AWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCA----PKLVVRQVAAGGTHSVVLTREG 169
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+++ G GD + S PV+V +NV IA G H+L L ++ ++ +
Sbjct: 170 HVWSWGQ----PWPPGDIKQISIPVRVQGL--ENVRLIAVGAFHNLALEEN---GTLWAW 220
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-- 263
G+ + GQLG + RS +P GL + +V I+A G S AL+ +G +Y WGRG
Sbjct: 221 GNNEYGQLGTGDTQPRSQPIP--VQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 278
Query: 264 ------NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
N S PQ +L + Q + G H + LT DG + G HG L
Sbjct: 279 RLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGR 338
Query: 316 RVSSTRPLSVAL----------EKVSNLDGVKVIQIAA-GAEHSAVVTE 353
+V++ +PL V + + + DG V ++ A G H+ + E
Sbjct: 339 KVTTGQPLDVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRHTLAIVE 387
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-------VSMLACGGAHVLALTSPSS 87
+ ++WG GQ G DE+ L + V +A GG H + LT
Sbjct: 111 RAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTRE-- 168
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G V+SWG+ G++ P V + R I+ G H+ + ++G L
Sbjct: 169 ---GHVWSWGQ----PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLALEENGTL 217
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G+ +GQLG GD + S P+ V + + IA G HS L +VYG+G
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDK---GEVYGWGR 274
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ G+LG + S LPQ L +I+ +S G S AL+ +G ++++GRG
Sbjct: 275 GEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRG 329
>gi|403254345|ref|XP_003919932.1| PREDICTED: tryptophan 5-hydroxylase 1 [Saimiri boliviensis
boliviensis]
Length = 863
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 130/288 (45%), Gaps = 25/288 (8%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G S GQLG G D L P+ + F R I I+ G HS ++D G LF CG G
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLNDFCKPR-CIRRITGGGGHSAIITDGGDLFVCGLNRDG 506
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
QLG G S S + + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 507 QLGLGHTEDVPSFTPCKSLLGCPIQQVACGWDFTIILTEN---GQVLSCGSNSFGQLGVP 563
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I LH +IV I+A + A + G ++ WG G S CP Q+L
Sbjct: 564 HGPRRCV-VPQA-IELHKEKIVCIAAGLRHALAATVRGIVFQWGTGLASRGRRLCPGQTL 621
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L+ ++
Sbjct: 622 PLFFTAKEPSRVTGLENSKAVCVIAGSDHSASLTDAGEVYVWGSNKHGQLATE---AAFL 678
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E V + +G H TE + TWG ++GQLG
Sbjct: 679 PVPQKIE-AHCFQNENVTAVWSGWTHLVAQTETGKVFTWGRADYGQLG 725
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 165/398 (41%), Gaps = 45/398 (11%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ LN + + GG H +T GG +F G
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLNDFCKPRCIRRITGGGGHSAIITD-----GGDLFVCGL 502
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D P G I ++ GW+ + ++++G + +CG +FGQL
Sbjct: 503 NRDGQLGLGHTEDVPSFTPCKSLLG--CPIQQVACGWDFTIILTENGQVLSCGSNSFGQL 560
Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--- 213
G HG R P + K V IA G+RH+L + Q +G G RG+
Sbjct: 561 GVPHGPRRC-VVPQAIELHKEKIV-CIAAGLRHALAATVRGIVFQ-WGTGLASRGRRLCP 617
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSD 268
G + + P GL + + V + A D SA+L+ G +Y WG +
Sbjct: 618 GQTLPLFFTAKEPSRVTGLENSKAVCVIAGSDHSASLTDAGEVYVWGSNKHGQLATEAAF 677
Query: 269 VNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML------------- 311
+ PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 678 LPVPQKIEAHCFQNENVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEGWKLE 737
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ +RP + + L G +++ G+EH+ V +WGW EHG G G
Sbjct: 738 KQDSFLPCSRPPNSMPSSLHCLTGA--TEVSCGSEHNLAVI-GGVCYSWGWNEHGMCGDG 794
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 795 TEANVWAPKPV----QALPSSSGLLVGCGAGHSLALCQ 828
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + ++ A G H++A T GK
Sbjct: 659 EVYVWGSNKHGQLATEAAFLPV-PQKIEAHCFQNENVTAVWSGWTHLVAQTE-----TGK 712
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYP--KPVTFFDGHRYTI---THISAGWNHS 138
VF+WGR GQLG E D+ P +P + + T +S G H+
Sbjct: 713 VFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSLHCLTGATEVSCGSEHN 772
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
V C ++ G G G G + +P V + + + + CG HSL L +
Sbjct: 773 LAVIGGVC-YSWGWNEHGMCGDGTEANVWAPKPVQALPSSSGLLVGCGAGHSLALCQ 828
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ + V +A GGAH +T+ G+++
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITA-----AGELY 4126
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4127 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4186
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4187 YGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4243
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4244 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4287
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + I+AG
Sbjct: 4060 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTE--VVDIAAG 4112
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ +G L+T G G +G+LGHGD P V + V IACG +L
Sbjct: 4113 GAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC 4172
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + + + S AL+
Sbjct: 4173 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTK 4227
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4228 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4249
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4250 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4298
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4299 TNAIQRPRLVAALQGKKINR-----VACGSAHTLAWS 4330
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 25/308 (8%)
Query: 53 HDELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV 110
++ L PQL+ L+S + V + A G H LAL++ S ++FSWG G G+LGHG+ V
Sbjct: 479 NNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATS-----ELFSWGCGDGGRLGHGDTV 533
Query: 111 DALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
PK V+ G + + HI+ G +S ++ G L+T G G +G+LGHG +
Sbjct: 534 SLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTV 593
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P+ V+ V ++CG + L G QV+ +G G G+LG + P++
Sbjct: 594 PMLVTGLKGLKVVDVSCGSGDAQTLSVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKL 650
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLS 280
L D++IV + S A++ +G +Y+WG+G N + V P+ +
Sbjct: 651 IEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKK 710
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
A+G H L LT GEV G + D R++ P + LD ++
Sbjct: 711 VVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAKPVP-----SVLPGLDSKHIVG 765
Query: 341 IAAGAEHS 348
I+ G S
Sbjct: 766 ISCGPAQS 773
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 18/232 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS------SVSMLACGGAHVLALTSPSSV 88
+++SWG G G+LG G P+L+ S+LS V +ACG + A+T+
Sbjct: 515 ELFSWGCGDGGRLGHGDTVSLEEPKLV--SALSGKQTGKQVIHIACGSTYSAAITA---- 568
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G++++WGRG+ G+LGHG D P VT G + +G + V+++G ++
Sbjct: 569 -DGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVW 627
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
+ GDG +G+LG G +P + + ++ ++ CG + S+ + KD QVY +G G
Sbjct: 628 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKD---GQVYSWGKG 684
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL ++V ++ AL+ G +Y+WG
Sbjct: 685 DNQRLGHGTE--EHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 19/231 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LS+ V +A GG H ALT +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALT-----VD 3069
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAAITSSGELYTW 3127
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3128 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3184
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
G+LG + ++PQ L+ + I S AL+ G ++TW
Sbjct: 3185 DFGKLG--RGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 44/274 (16%)
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGFGSGKRGQ 212
++G LG Y + S P++ + N V Q+AC + L+L ++ L Q Y +
Sbjct: 427 SWGLLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNNT----- 481
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWG------RGFN 264
LG PQ+ GL IV I+A +G ALSA L++WG G
Sbjct: 482 LG-----------PQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHG 530
Query: 265 STSDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
T + P+ L S+LS Q A G + +T DGE+ G ++G L
Sbjct: 531 DTVSLEEPK-LVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSE 589
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
T P+ V+ L G+KV+ ++ G+ + VTEN + +WG G++G+LG G +
Sbjct: 590 DQTVPM-----LVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDG 644
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ AI++
Sbjct: 645 CKTPKLI---EKLQDLDI-VKVRCGSQFSIAITK 674
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3967 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4022
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4023 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G +V+ IAAG HSA +T + TWG G +G+LG
Sbjct: 4083 KLGHGNRSPCDRP-----RVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLG 4137
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
G++ DQ+ PK+V ++ +++ CGSG
Sbjct: 4138 HGDSEDQLKPKLVEALQGYR----VIDIACGSG 4166
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 26/306 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4022
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4023 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4079
Query: 209 KRGQLGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
+ G+LG RS P+V L E+V I+A G SA ++A G LYTWG+
Sbjct: 4080 EDGKLGHGN---RSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRL 4136
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + D P+ + + + + G L LT D V G +G L
Sbjct: 4137 GHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 4196
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ K+ +L GV V ++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4197 GCKVPM-----KIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 4251
Query: 378 HPKVVN 383
P+ V
Sbjct: 4252 RPRQVQ 4257
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++AEG +Y
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3018
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + S+ + A+ G H LT DG+V G
Sbjct: 3019 ACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3078
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3079 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3133
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3134 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3164
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++ I KVF WG QLG + P + ++ G V+ G
Sbjct: 2958 TATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSA--LNVVQVAGGSKSLFAVTAEG 3015
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPV--KVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQ 201
++ CG+ T G+LG G S + P+ ++++ N V ++A G RH+ L D +
Sbjct: 3016 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVD---GK 3071
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
V+ +G G G+LG S+ + P++ L I I+ SAA+++ G LYTWG
Sbjct: 3072 VFSWGEGDDGKLGHFSR---MNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 261 RGF-------NSTSDVNCPQSLPSSL--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHG 309
G ++T+ + P+ + L Q A G L LT +G V G G
Sbjct: 3129 LGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3187
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
L P + + L+G V QI GA+ S +T++ + TW +H
Sbjct: 3188 KLGRGGSEGCNIP-----QNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKH 3238
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 29/258 (11%)
Query: 168 SPVKVSSFVNK----NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223
S +KV SF NV Q+A G + + + +VY G G+LG+ +V
Sbjct: 2982 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTAE---GKVYACGEATNGRLGLGISS-GTV 3037
Query: 224 SLPQVTIGLHD--IEIVGISANGDRSAALSAEGHLYTWGRGFNST----SDVNC--PQSL 275
+P+ L + ++ V + + G + AL+ +G +++WG G + S +NC P+ +
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Query: 276 PS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + A G +H +T GE+ G +G L + + +P + V L
Sbjct: 3098 EALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKP-----KMVKVL 3152
Query: 334 DGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
G +VIQ+A G+ + +T+ + +WG G+ G+LG G + P+ + E N
Sbjct: 3153 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI----ERLNG 3208
Query: 392 DTQLEVFCGSGFTYAISR 409
++ CG+ F+ A+++
Sbjct: 3209 QAVCQIECGAQFSLALTK 3226
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G G+LG G +L P+++ + V +ACG A LALT G
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE-----GL 3177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT--- 149
VFSWG G G+LG G P+ + +G + I G S ++ SG ++T
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ--AVCQIECGAQFSLALTKSGVVWTWXX 3235
Query: 150 ---CGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
C F + +Y +KVS FV + C L ++K + +VY +
Sbjct: 3236 TKHCLAVXFY---YXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAW 3292
Query: 206 GSGKRGQLG 214
G GQ G
Sbjct: 3293 GDNDHGQQG 3301
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG +GQLG G + P+L+ ++ +ACG AH LA ++ GK+
Sbjct: 4282 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLP 4341
Query: 95 S 95
S
Sbjct: 4342 S 4342
>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 178/409 (43%), Gaps = 71/409 (17%)
Query: 39 WGAGTDGQLGTGRLHDELSPQ---LLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
WG G G+LG G L SP + L+CGGAH L LT GG+VF+
Sbjct: 36 WGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTE-----GGRVFA 90
Query: 96 WGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G M L P V+ G + ISAG +HS V+ G LF G +
Sbjct: 91 TGLNDFGQLGIGSSMPHTLDPVEVS---GFHEKVVQISAGNHHSCAVTADGELFVWGKNS 147
Query: 155 FGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + S+P KV + V A G HS+V+ +D + +G+ G+
Sbjct: 148 SGQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTED---GEALSWGAAGGGR 204
Query: 213 LGVS-KDRIRSVSL------PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
LG K ++ P++ L I+I I+A SA + +G ++ +G+
Sbjct: 205 LGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQKTEK 264
Query: 263 -FNSTSDVNCPQSLPSSLSFS-QAALGWNHVLVLTGDGEV----------LMLGGSHHGM 310
++D P S+ + FS + A G H +T G++ L LGG+ GM
Sbjct: 265 VLGRSNDAPRP-SVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGT--GM 321
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------- 363
+ PE VSS+ L + V +++ G +H+AV++ I TWGWG
Sbjct: 322 VRFPEVVSSS------------LFKLPVSKVSCGWKHTAVIS-GEDIYTWGWGGANGTFF 368
Query: 364 -----EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLG GN D P +V E + V CG T AI
Sbjct: 369 EEGHSSGGQLGHGNDVDYCEPMMV----ELHKNARAVHVSCGFNHTGAI 413
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 50 GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM 109
GR +D P ++ S +ACGG H A+T G ++SWG +G LG G
Sbjct: 267 GRSNDAPRPSVVEEIQFSE--EVACGGYHTCAVTDR-----GDLYSWGSNENGCLGLGGT 319
Query: 110 VDALYPKPVT--FFDGHRYTITHISAGWNHSGFVSD-----------SGCLFTCGDGTFG 156
+P+ V+ F + ++ +S GW H+ +S +G F G + G
Sbjct: 320 GMVRFPEVVSSSLF---KLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGG 376
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
QLGHG+ + P+ V N ++CG H+ +L+
Sbjct: 377 QLGHGNDVDYCEPMMVELHKNARAVHVSCGFNHTGAILE 415
>gi|384248125|gb|EIE21610.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 609
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 163/359 (45%), Gaps = 30/359 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G + QLGT +L+P L+ + + LA H A+ G ++
Sbjct: 121 EVYSWGNGANYQLGTEAEGLQLTPNRLDSLHGTPIVALAAAKFHSAAVAK-----DGSLY 175
Query: 95 SWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
+WG G G+LGH E + P+ V R T+ ++ G +H+ V+ +G LF
Sbjct: 176 TWGFGRGGRLGHPEFHIHSGESAVILPRLVALPG--RRTVAAVATGKHHTVAVTRAGELF 233
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
T G G+LG+ S +P +V+S + V +A RH++VL + G VY +GS
Sbjct: 234 TWGSNRDGRLGYTAVDSQPTPRRVTSM-RQRVMAVAAANRHTVVLAE---GGTVYSWGSN 289
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSD 268
+GQLG S ++P++ + I ++A + L+ EG +YTWG +
Sbjct: 290 LQGQLGYGTSDSASNAVPRIVEAMVGKTITAVAAAKRHTVVLTVEGDVYTWGHRVVTPKR 349
Query: 269 VNC--PQSLPSSLSFSQAALGWNHVLVLTGDGEV-------LMLGGSHHGMLSDPERVSS 319
V + + + + S A+ G V+ G +V + G +H L V +
Sbjct: 350 VQLAGARDVARAANASGASAGGWEVVFHRGQSQVARPHAVAVCAGAAHSACLDQSGAVLA 409
Query: 320 TRPLSVAL---EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW-GWGEHGQLGLGNTC 374
R L E +L G +V+ IAAG +A VT+ + W GW + +L G C
Sbjct: 410 WRSADPRLHVQEVGGDLAGKRVVHIAAGKYRTATVTDEGDVYMWEGWSKPAELSAGRGC 468
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 40/209 (19%)
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
++VY +G+G QLG + ++ P LH IV ++A SAA++ +G LYT
Sbjct: 119 ASEVYSWGNGANYQLGTEAEGLQLT--PNRLDSLHGTPIVALAAAKFHSAAVAKDGSLYT 176
Query: 259 WGRG------------FNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
WG G + S V P+ +LP + + A G +H + +T GE+ G
Sbjct: 177 WGFGRGGRLGHPEFHIHSGESAVILPRLVALPGRRTVAAVATGKHHTVAVTRAGELFTWG 236
Query: 305 GSHHGML--------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ G L P RV+S R +V+ +AA H+ V+ E
Sbjct: 237 SNRDGRLGYTAVDSQPTPRRVTSMRQ--------------RVMAVAAANRHTVVLAEGGT 282
Query: 357 IMTWGWGEHGQLGLG--NTCDQIHPKVVN 383
+ +WG GQLG G ++ P++V
Sbjct: 283 VYSWGSNLQGQLGYGTSDSASNAVPRIVE 311
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 108 bits (269), Expect = 6e-21, Method: Composition-based stats.
Identities = 93/355 (26%), Positives = 152/355 (42%), Gaps = 45/355 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQ+G G + P + L + SVS+ G + A+T G ++
Sbjct: 760 LYMWGVNDFGQIGDGTTKNRYKPTKI-LDHVVSVSL---GDYYSGAITQ-----DGSLYM 810
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG GQ+G G D KP D + +S G+ HSG ++ G L+ G
Sbjct: 811 WGSNVYGQIGDGTTEDRY--KPTKILD----HVIAVSLGYCHSGAITQDGSLYMWGSNDS 864
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQ+G G P K+ +V ++ G+ HS + +D +Y +GS RG +G
Sbjct: 865 GQIGDGTTEDRYKPTKILD----HVIAVSLGVSHSGAITQD---GSLYMWGSNSRGGIG- 916
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D V I H ++ +S S A++ +G LY WG G + D
Sbjct: 917 --DGTTEVRYKPTKILDH---VIAVSLQTGNSGAITQDGSLYMWGSNVYGEIGDGTEEDR 971
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P + + +LG +H +T DG + M G +++G + D +P +
Sbjct: 972 YKPTKILDHVI--AVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKI---- 1025
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
LD VI ++ G HS +T++ ++ WGW GQ+G G T + P + +
Sbjct: 1026 ---LD--HVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPTQITI 1075
Score = 76.3 bits (186), Expect = 3e-11, Method: Composition-based stats.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 41/279 (14%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G HSG ++ G L+ G FGQ+G G ++ P K+ +V ++ G +S
Sbjct: 744 LSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKILD----HVVSVSLGDYYS 799
Query: 191 LVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
+ +D +Y +GS GQ+ G ++DR + + ++ +S S
Sbjct: 800 GAITQD---GSLYMWGSNVYGQIGDGTTEDRYKPTKILD--------HVIAVSLGYCHSG 848
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
A++ +G LY WG G +T D P + + +LG +H +T DG + M
Sbjct: 849 AITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKILDHV--IAVSLGVSHSGAITQDGSLYM 906
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + G + D +P + LD V + + G +S +T++ ++ WG
Sbjct: 907 WGSNSRGGIGDGTTEVRYKPTKI-------LDHVIAVSLQTG--NSGAITQDGSLYMWGS 957
Query: 363 GEHGQLGLGNTCDQIHPK-------VVNLGDEFQNRDTQ 394
+G++G G D+ P V+LGD+ TQ
Sbjct: 958 NVYGEIGDGTEEDRYKPTKILDHVIAVSLGDDHSGAITQ 996
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 25/221 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG GQLG G +P+++ S S+ +ACG H+ A++ G +++
Sbjct: 251 VYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISK-----SGDLYT 305
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G GQLGHG++ L+PK V +F+ + I ++ G N + VS++G LF+ G G +
Sbjct: 306 WGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEY 365
Query: 156 GQLG---------------HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
GQLG D+ +S P +V + + V ++ACG H++ + D N
Sbjct: 366 GQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTD---N 422
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
VY +G G G LG + + V PQ L EI +S
Sbjct: 423 DVYTWGWGSSGCLGFGDRKFQLV--PQRVPSLSGEEISSVS 461
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 128/283 (45%), Gaps = 50/283 (17%)
Query: 107 GEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
GE+VD PV F I ISAGW +S V+ +G ++T G GQLG GD
Sbjct: 210 GEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWY 269
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
H +P + S NK++ IACG +H + K +Y +G G GQLG K ++S+
Sbjct: 270 HGNPRVIRSLSNKSIVNIACGRQHMAAISK---SGDLYTWGLGVFGQLGHGK--LKSLLH 324
Query: 226 PQVTIGL--HDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNCPQSLPSSL 279
P+ + +IV ++ + + A+S G L+++G G +T D
Sbjct: 325 PKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQ--------- 375
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
+ WN+ GD + H S P++V + L+ VKV
Sbjct: 376 -----YMDWNN----NGDRD-------DHLKYSLPKQVKA-------------LESVKVR 406
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++A G H+ VT + + TWGWG G LG G+ Q+ P+ V
Sbjct: 407 KVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRV 449
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 32/246 (13%)
Query: 54 DELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA 112
++++P L++ S S + ++ G A+ A+TS G V++WG GQLG G+
Sbjct: 216 NQMTPVLVDFGSKSIKIVDISAGWAYSAAVTST-----GNVYTWGFNEKGQLGLGDRWYH 270
Query: 113 LYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV 172
P+ + +I +I+ G H +S SG L+T G G FGQLGHG +S P KV
Sbjct: 271 GNPRVIRSLSNK--SIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKV 328
Query: 173 SSF--VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR--------- 221
F K + Q+A G ++ + ++ +++ FG G+ GQLG ++D
Sbjct: 329 LYFEQQQKKIVQVATGANFTMAVSEN---GELFSFGHGEYGQLGATEDTQYMDWNNNGDR 385
Query: 222 ----SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
SLP+ L +++ ++ + A++ + +YTWG GF
Sbjct: 386 DDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLV 445
Query: 272 PQSLPS 277
PQ +PS
Sbjct: 446 PQRVPS 451
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 32/323 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V S+G G GQLG D L P + G R I I+ G HS V++ G +++ G
Sbjct: 3 VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKR--IKQIACGEAHSLAVTEFGDVYSWGR 60
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGH + P + + ++ + ++ACG HSL L +VY + G+ +
Sbjct: 61 GKEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTD---TGKVYQW--GQLHE 115
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGI----SANGDRSAALSAEGHLYTWGRGFNSTSD 268
+ +K ++S GL +E+ GI S D S ++ G + S+S
Sbjct: 116 IDATKSGVKSQG------GL--VEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSV 167
Query: 269 VNCPQSLPSSLSFSQAALG--WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
+ + ++ Q +V T + GS G + D +++ P+ V
Sbjct: 168 LQDNPTANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMT---PVLVD 224
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
S +K++ I+AG +SA VT + TWG+ E GQLGLG+ +P+V+
Sbjct: 225 FGSKS----IKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIR--- 277
Query: 387 EFQNRDTQLEVFCGSGFTYAISR 409
N+ + + CG AIS+
Sbjct: 278 SLSNKSI-VNIACGRQHMAAISK 299
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V S+G G GQLG D+L P ++ L + +ACG AH LA+T G V+S
Sbjct: 3 VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTE-----FGDVYS 57
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WGRG G+LGH + P + + R I ++ G HS ++D+G ++ G
Sbjct: 58 WGRGKEGELGHPQKAMTAPPALIKALEHER--IVKVACGNYHSLALTDTGKVYQWG 111
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
S+ + GW + +T G V G + G L +R P + +L
Sbjct: 229 SIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNP-----RVIRSLSNKS 283
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 397
++ IA G +H A ++++ + TWG G GQLG G +HPK V ++ Q + Q V
Sbjct: 284 IVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQ--V 341
Query: 398 FCGSGFTYAISRH 410
G+ FT A+S +
Sbjct: 342 ATGANFTMAVSEN 354
>gi|162453789|ref|YP_001616156.1| hypothetical protein sce5513 [Sorangium cellulosum So ce56]
gi|161164371|emb|CAN95676.1| hypothetical protein sce5513 [Sorangium cellulosum So ce56]
Length = 514
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 161/357 (45%), Gaps = 39/357 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGK 92
VW WG T G LG G L + L ++ LS + V+ ++ G AH A+ + G
Sbjct: 177 VWCWGRNTWGNLGDGTLQQDRPLPRPVMGLSGAARVAASISSGRAHTCAV-----LADGA 231
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V WG G+SGQLG GE ++ P G T ++ G H+ V+ S L+ G+
Sbjct: 232 VACWGAGNSGQLGDGEATNSPSPVRAKELAG----ATQVAVGGTHTCAVTASHELYCWGE 287
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG-FGSGKRG 211
G+ GQLG+GD P + + V ++ G+ H+ + + +G + +G + G
Sbjct: 288 GSSGQLGYGDEVDRIEP----TVMLDGVDSVSAGLSHTCAGMIERMGERTMNCWGHNESG 343
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---STSD 268
QLG+ + PQ GL + I +A + A A G WG+G T
Sbjct: 344 QLGLGN--FNQQNTPQPVPGLTSVAIT--AAGALHTCAAPARGVASCWGKGEQFRLGTGV 399
Query: 269 VNC---PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
VN P+ +P + ++ +LG H + GEVL+ G + G L + + P S+
Sbjct: 400 VNPEANPRKIPDLVDVTRISLGARHSGAVLAGGEVLLWGDNAKGQLGNGTQDPVLLPESI 459
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
L VI++A G +HS + ++ WG +G+LG G + P++V
Sbjct: 460 GL--------TDVIELALGDDHSCALKRTGEMLCWGDNRNGELGDGT----VEPRLV 504
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 132/329 (40%), Gaps = 39/329 (11%)
Query: 78 HVLALTSPSSVI--GGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAG 134
H+ A T + + G V+ WGR + G LG G + D P+PV G IS+G
Sbjct: 160 HIAAGTDYTCAVLSDGSVWCWGRNTWGNLGDGTLQQDRPLPRPVMGLSGAARVAASISSG 219
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
H+ V G + G G GQLG G+ + SPV+ Q+A G H+ +
Sbjct: 220 RAHTCAVLADGAVACWGAGNSGQLGDGEATNSPSPVRAKELAGAT--QVAVGGTHTCAVT 277
Query: 195 KDCLGNQVYGFGSGKRGQLGVSK--DRIRSVSL----PQVTIGLHDIEIVGISANGDRSA 248
+++Y +G G GQLG DRI + V+ GL I G+R+
Sbjct: 278 AS---HELYCWGEGSSGQLGYGDEVDRIEPTVMLDGVDSVSAGLSHTCAGMIERMGERT- 333
Query: 249 ALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT--------GDGEV 300
++ GH + G + + N PQ +P S + A G H G GE
Sbjct: 334 -MNCWGHNESGQLGLGNFNQQNTPQPVPGLTSVAITAAGALHTCAAPARGVASCWGKGEQ 392
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
LG ++P ++ D V V +I+ GA HS V ++ W
Sbjct: 393 FRLGTGVVNPEANPRKIP---------------DLVDVTRISLGARHSGAVLAGGEVLLW 437
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
G GQLG G + P+ + L D +
Sbjct: 438 GDNAKGQLGNGTQDPVLLPESIGLTDVIE 466
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 21/231 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG G+ GQLG G D + P ++ L V ++ G +H A +G +
Sbjct: 281 ELYCWGEGSSGQLGYGDEVDRIEPTVM----LDGVDSVSAGLSHTCAGM--IERMGERTM 334
Query: 95 S-WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG SGQLG G P+PV ++ +AG H+ G G G
Sbjct: 335 NCWGHNESGQLGLGNFNQQNTPQPVPGL----TSVAITAAGALHTCAAPARGVASCWGKG 390
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+LG G ++P K+ V +V +I+ G RHS +L G +V +G +GQL
Sbjct: 391 EQFRLGTGVVNPEANPRKIPDLV--DVTRISLGARHSGAVLA---GGEVLLWGDNAKGQL 445
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
G V LP+ +IGL D ++ ++ D S AL G + WG N
Sbjct: 446 GNGTQ--DPVLLPE-SIGLTD--VIELALGDDHSCALKRTGEMLCWGDNRN 491
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G +LGTG ++ E +P+ + L V+ ++ G H A+ + GG+V WG
Sbjct: 387 WGKGEQFRLGTGVVNPEANPR--KIPDLVDVTRISLGARHSGAV-----LAGGEVLLWGD 439
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
+ GQLG+G L P+ + D + ++ G +HS + +G + GD G+L
Sbjct: 440 NAKGQLGNGTQDPVLLPESIGLTD-----VIELALGDDHSCALKRTGEMLCWGDNRNGEL 494
Query: 159 GHGDYRSHSSPVKVS 173
G G P +V+
Sbjct: 495 GDGTVEPRLVPTRVA 509
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 102/270 (37%), Gaps = 35/270 (12%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY---RSHSSPVKVSSFVNKNVHQIAC 185
THI+AG +++ V G ++ G T+G LG G R PV S + I+
Sbjct: 159 THIAAGTDYTCAVLSDGSVWCWGRNTWGNLGDGTLQQDRPLPRPVMGLSGAARVAASISS 218
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG-----VSKDRIRSVSLPQVTIGLHDIEIVGI 240
G H+ +L D V +G+G GQLG S +R+ L T +
Sbjct: 219 GRAHTCAVLAD---GAVACWGAGNSGQLGDGEATNSPSPVRAKELAGATQ---------V 266
Query: 241 SANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+ G + A++A LY WG G+ D P + + A L ++
Sbjct: 267 AVGGTHTCAVTASHELYCWGEGSSGQLGYGDEVDRIEPTVMLDGVDSVSAGLSHTCAGMI 326
Query: 295 TGDGEVLM--LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
GE M G + G L P + V L V + AAGA H+
Sbjct: 327 ERMGERTMNCWGHNESGQLGLGNFNQQNTP-----QPVPGLTSVAI--TAAGALHTCAAP 379
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
WG GE +LG G + +P+ +
Sbjct: 380 ARGVASCWGKGEQFRLGTGVVNPEANPRKI 409
>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC4-like [Glycine max]
Length = 404
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 171/396 (43%), Gaps = 47/396 (11%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG G G+LG G L + P + ++ +ACGGAH L LT G V++ G
Sbjct: 25 WGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTD-----NGCVYATGL 79
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG E +P+ F G + +SAG+NHS ++ G L+ G T QL
Sbjct: 80 NDFGQLGVSES-KHYSVEPLCVF-GEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQL 137
Query: 159 GHGDYRSHSSPV--KVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
G G + P+ KV N+ A G HSL + G + + +G G G+LG
Sbjct: 138 GLGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISD---GGEAFSWGVGVSGRLGHG 194
Query: 217 KD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GF 263
+ + S P++ L I++ +++ SA G ++ +G
Sbjct: 195 HESSILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRL 254
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ SD P SL L S+ G H VLT GE+ + +G L + S+ +
Sbjct: 255 KAMSDATKP-SLIGELPSSKVVCGGYHTCVLTNSGELYTWXSNENGCLG----IGSSDVI 309
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EHGQLGLG 371
+ + V Q++ G +++A ++E R + TWGWG GQLG G
Sbjct: 310 HLPEKIXGPFLKSSVSQLSCGWKNTAAISEGR-VFTWGWGGSNGTFSEVGHSSSGQLGHG 368
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ D I+P V G++ + L+V CG T AI
Sbjct: 369 SDVDYINPTRVCFGEDVK----ALQVSCGFNHTGAI 400
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 26/239 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
+++ WG T QLG G+ + P + L+ ++ M A G H LA++ GG+
Sbjct: 125 ELYMWGKNTSVQLGLGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISD-----GGE 179
Query: 93 VFSWGRGSSGQLGHGEMVDAL---------YPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
FSWG G SG+LGHG L P+ + +G + + ++++G +S +
Sbjct: 180 AFSWGVGVSGRLGHGHESSILGFFKSYSEYTPRLIKDLEGIK--VKYVASGLLNSACTDE 237
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G +F G+ +L ++ S K S ++ CG H+ VL ++Y
Sbjct: 238 NGSVFVFGERAIERL---RLKAMSDATKPSLIGELPSSKVVCGGYHTCVLTNS---GELY 291
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ S + G LG+ + + LP+ G V + G ++ A +EG ++TWG G
Sbjct: 292 TWXSNENGCLGIGSSDV--IHLPEKIXGPFLKSSVSQLSCGWKNTAAISEGRVFTWGWG 348
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 81/233 (34%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSPQL------------------------- 60
+ +SWG G G+LG G + + E +P+L
Sbjct: 179 EAFSWGVGVSGRLGHGHESSILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDEN 238
Query: 61 -------------LNLSSLSSV-----------SMLACGGAHVLALTSPSSVIGGKVFSW 96
L L ++S S + CGG H LT+ G++++W
Sbjct: 239 GSVFVFGERAIERLRLKAMSDATKPSLIGELPSSKVVCGGYHTCVLTNS-----GELYTW 293
Query: 97 GRGSSGQLGHGEMVDALYPKPVT--FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG--- 151
+G LG G P+ + F + +++ +S GW ++ +S+ G +FT G
Sbjct: 294 XSNENGCLGIGSSDVIHLPEKIXGPFL---KSSVSQLSCGWKNTAAISE-GRVFTWGWGG 349
Query: 152 -DGTF--------GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
+GTF GQLGHG + +P +V + Q++CG H+ +L+
Sbjct: 350 SNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 402
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 137/286 (47%), Gaps = 22/286 (7%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ V+ + L+ G +GQLG G + + P V + + V ACG H+
Sbjct: 30 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LV + G +VY G GQLG+ R+ S ++ +I +SA + SAAL
Sbjct: 90 LVSTE---GGKVYASGGNNEGQLGLGDTDERN-SFHLISFFTSQRKIKQLSAGSNTSAAL 145
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
+ +G L+ WG G + ++V PQ + S + G+ H +T +GE+ G
Sbjct: 146 TEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFG 205
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
G L P+++ + ++ + KV+Q+A G H+ V+TE +A+ T+G G+
Sbjct: 206 EPESGKLGLPKQLLVNHRMPQSVPGIPE----KVVQVACGGGHTVVLTE-KAVYTFGLGQ 260
Query: 365 HGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQL-EVFCGSGFTYAIS 408
GQLGLG + PKV+ +D ++ +FCG T I+
Sbjct: 261 FGQLGLGTFLFETPVPKVIE-----HIKDLKISSIFCGENHTALIT 301
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 45 KLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 99
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 100 ASGGNNEGQLGLGDTDERNSFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 158
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + ++Y FG + G+LG
Sbjct: 159 EGQIGLKNITNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GELYTFGEPESGKLG 213
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS------ 267
+ K + + +PQ G+ + ++V ++ G + L+ E +YT+G G F
Sbjct: 214 LPKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 271
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ P+ + L S G NH ++T G + G HG L
Sbjct: 272 ETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKL 317
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 49/331 (14%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--------VDALYPKPVTFF 121
+ L+CG H +T K++ +G + GQLG G V AL P+ V F
Sbjct: 28 AFLSCGDEHTAIVTG-----NNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKF- 81
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNV 180
+ G NH+ ++ G ++ G GQLG GD +S +S F + + +
Sbjct: 82 ---------AACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKI 132
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVG 239
Q++ G S L +D +++ +G GQ+G+ I +V +PQ VT+G I
Sbjct: 133 KQLSAGSNTSAALTED---GELFMWGDNSEGQIGLK--NITNVCVPQQVTVGK---PISW 184
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPS-SLSFSQAALGWNH 290
IS SA ++ EG LYT+G G VN PQS+P Q A G H
Sbjct: 185 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQVACGGGH 244
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+VLT + V G G L + T P+ +E + +L K+ I G H+A+
Sbjct: 245 TVVLT-EKAVYTFGLGQFGQLGLGTFLFET-PVPKVIEHIKDL---KISSIFCGENHTAL 299
Query: 351 VTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
+T+ + T+G G HG+LGLG N +Q P
Sbjct: 300 ITDLGLMYTFGDGRHGKLGLGLENFTNQFTP 330
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G G+LG + L + PQ + V +ACGG H + LT +
Sbjct: 200 ELYTFGEPESGKLGLPKQLLVNHRMPQSVP-GIPEKVVQVACGGGHTVVLTEKA------ 252
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTC 150
V+++G G GQLG G L+ PV H I+ I G NH+ ++D G ++T
Sbjct: 253 VYTFGLGQFGQLGLGTF---LFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTF 309
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GDG G+LG G ++ + +P S+F+ V +ACG H+LV
Sbjct: 310 GDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVF 354
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 852 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 904
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 905 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 964
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 965 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 1019
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 1020 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 1041
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 1042 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 1090
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 1091 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 1122
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 918
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 919 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 978
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 979 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 1035
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 1036 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 1079
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P+L+ + +ACG +H ALTS G++++WG G G+LGHG+ L PK
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTS-----SGELYTWGLGEYGRLGHGDNTTQLKPKM 60
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
V GHR + + ++D G +F+ GDG FG+LG G + P +
Sbjct: 61 VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG 120
Query: 178 KNVHQIACGMRHSLVLLKDCL--GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ V QI CG + SL L K + QVY +G GQ G + P + GL
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRK--PTLVQGLEGQ 178
Query: 236 EIVGISANGDRSAA 249
+I ++ S A
Sbjct: 179 KITRVACGSSHSVA 192
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 814
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 871
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 872 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 929
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 930 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 989
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 990 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 1044
Query: 379 PKVVN 383
P+ V
Sbjct: 1045 PRQVQ 1049
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 759 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 814
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 874
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 875 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 929
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 930 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 958
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGG--AHVLALTSPSSVIGGK 92
++++WG G G+LG G +L P+++ + V +ACG A LALT G
Sbjct: 35 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE-----GL 89
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT--- 149
VFSWG G G+LG G P+ + +G + I G S ++ SG ++T
Sbjct: 90 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ--GVCQIECGAQFSLALTKSGVVWTWQV 147
Query: 150 --CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
GD GQ G+G + P V + + ++ACG HS+
Sbjct: 148 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 191
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
I I+ G +HS ++ SG L+T G G +G+LGHGD + P V + V Q+ACG
Sbjct: 17 IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 76
Query: 188 R--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
R +L L + L V+ +G G G+LG + ++PQ L+ + I
Sbjct: 77 RDAQTLALTDEGL---VFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQ 131
Query: 246 RSAALSAEGHLYTW----------GRGFNSTSDVNCPQSLPSSL---SFSQAALGWNHVL 292
S AL+ G ++TW G+ N T+ VN +L L ++ A G +H +
Sbjct: 132 FSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 191
Query: 293 VLT 295
T
Sbjct: 192 AWT 194
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPSS 278
P++ L I I+ SAAL++ G LYTWG G ++T+ + P+ +
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK-PKMVKVL 64
Query: 279 L--SFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
L Q A G L LT +G V G G L P + + L+
Sbjct: 65 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP-----QNIERLN 119
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTW---GWG--EHGQLGLGNTCDQIHPKVVNLGDEFQ 389
G V QI GA+ S +T++ + TW WG +HGQ G G T P +V G E Q
Sbjct: 120 GQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQ 178
Query: 390 NRDTQLEVFCGSGFTYA 406
V CGS + A
Sbjct: 179 K---ITRVACGSSHSVA 192
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 1074 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 1132
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG+ GQLG G ++++S P L+ + ++ +ACGG H A++ G +
Sbjct: 473 ELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK-----SGAI 527
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHSGFVSDSGCLFTCG 151
F WG+ + GQLG ++ +P + G RY +S G + S F++ G +FTCG
Sbjct: 528 FGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRY----VSCGDDFSVFLTAGGGVFTCG 583
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
GTFGQLGHG + P V + + QIACG RH+L + ++YGFG G
Sbjct: 584 AGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPS--RGKIYGFGLSGVG 641
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
QLG+ + + + PQ+ G +I+ S A
Sbjct: 642 QLGIGI--VGNYNTPQIVRGPWQSQILTFSVQMSEELA 677
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 145/339 (42%), Gaps = 27/339 (7%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALY 114
+ P+ ++ ++ ACG +H L LT+ GK++S G GQLGH E +
Sbjct: 336 MVPRKMDWMHAKEIARAACGASHTLLLTN-----DGKMYSCGNNDHGQLGHDVESLPNKR 390
Query: 115 PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVS 173
P+ +T + Y IT G HS +++ G +++ G GQLG D P +
Sbjct: 391 PQLLTALEN--YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIR 448
Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
S K V QIA G H L L ++Y +GS GQLG+ VS P + L
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTN---SGELYAWGSNAYGQLGLGMTN-EKVSTPTLVQSLA 504
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAA 285
+ I I+ G+ S A+S G ++ WG+ G N + P L + SL +
Sbjct: 505 GVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVS 564
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G + + LT G V G G L + P V L G K+ QIA G
Sbjct: 565 CGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILP-----RMVFELMGSKITQIACGR 619
Query: 346 EHSAVVTENR-AIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
H+ +R I +G GQLG+G + P++V
Sbjct: 620 RHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVR 658
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 34/243 (13%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P K+ K + + ACG H+L+L D ++Y G+ GQLG + + + PQ+
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTND---GKMYSCGNNDHGQLGHDVESLPN-KRPQL 393
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPS--SL 279
L + I S AL+ G +Y+WG T+ P+ + S +
Sbjct: 394 LTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453
Query: 280 SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPERVSSTRPLSVALEKVSNLDGV 336
Q A G H L LT GE+ G + +G L E+VS+ V +L GV
Sbjct: 454 QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTP-------TLVQSLAGV 506
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-----------KVVNLG 385
+ IA G HS V+++ AI WG GQLGL + + P + V+ G
Sbjct: 507 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCG 566
Query: 386 DEF 388
D+F
Sbjct: 567 DDF 569
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 136/302 (45%), Gaps = 28/302 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+L+ S V +ACG AH +T I G V
Sbjct: 4196 EVFSWGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACIT-----IQGHVL 4250
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4251 TWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4310
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 4311 YGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR---SGSVYTWGKGDYHRLG 4367
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
+ D +R P+ L +I+ I+ A S G ++TWG G + S
Sbjct: 4368 HGNTDHVRR---PKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVS 4424
Query: 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P+ Q+ G + V V+ G L L LS+ R + PL L
Sbjct: 4425 AIQRPR-------LVQSLQGKHIVKVICGSAHTLALSTYQ---LSEAVRPPPSPPLEYDL 4474
Query: 328 EK 329
+
Sbjct: 4475 VR 4476
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 167/387 (43%), Gaps = 35/387 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
KV WG QLG + P + LS L + + GG+ L + S GK+
Sbjct: 3029 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--AGGSKSLFIVSQD----GKL 3082
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++ G G++G+LG G + PK V + + +G H+ ++ G +F+ G+G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+LGHG+ + P + + K + IACG HS + ++Y +G G+ G+L
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITS---SGELYTWGLGEYGRL 3199
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW--------GRG 262
G D + P++ L D +V + A G R A L+ +G +++W GRG
Sbjct: 3200 G-HGDNCTQLK-PKLVTALQDHRVVQV-ACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256
Query: 263 FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ + + + Q G L LT GEV G + L +P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-V 381
+ L G KVI +A GA H VT++ + WG +HGQ G GNT P V
Sbjct: 3317 -----TPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLV 3371
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ L F NR V CGS + A S
Sbjct: 3372 LGLDGIFVNR-----VACGSSHSVAWS 3393
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 117/238 (49%), Gaps = 13/238 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG+G G+LG G + P + + V+ + CG ++ A+T+ G++++
Sbjct: 630 VYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITA-----SGELYT 684
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WGRG+ G+LGHG D P VT HR + G HS V+++G F GDG F
Sbjct: 685 WGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDF 744
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG+ S PV+V V ++ G + S+ L ++ VY +G G G+LG
Sbjct: 745 GKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTRE---GTVYTWGKGHGGRLGH 801
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
V P++ L +IV ++ AL+A G LY WGR N + CP+
Sbjct: 802 GNSEHSPV--PKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGR--NDFQQI-CPE 854
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 27/288 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+VFSWG G G+LGHG PK + G + I+ G
Sbjct: 4184 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIESLSG--IGVVDIACG 4236
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ G + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + +P L + + + S AL+
Sbjct: 4297 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTR 4351
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G +T V P+ + + A G H + + GEV G
Sbjct: 4352 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWG 4411
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ G L D + RP V +L G ++++ G+ H+ ++
Sbjct: 4412 DNDEGQLGDGTVSAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4454
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 171/390 (43%), Gaps = 35/390 (8%)
Query: 36 VWSWGAGTDGQLGT---GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
++ WG GQLG R+ + + L+L L + + GG L +P GK
Sbjct: 4091 IFGWGHNHRGQLGGLDGSRIKNPTPCEALSL--LRPIQI--AGGEQTLYAVTPD----GK 4142
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+++ G G+ G+LG G P V +++G H +S G +F+ G+
Sbjct: 4143 LYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGE 4202
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHG+ S+ P + S V IACG HS + + V +G G+ G+
Sbjct: 4203 GEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACI---TIQGHVLTWGKGRYGR 4259
Query: 213 L--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
L G S+D+++ L + +G I+I S + ++ ++ + ++++WG G
Sbjct: 4260 LGHGDSEDQLQP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRG 4317
Query: 265 STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
+ P + S L ++ G + LT G V G + L RP
Sbjct: 4318 GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRP 4377
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+KV+ L G K+I IA G+ H ++ + TWG + GQLG G P++V
Sbjct: 4378 -----KKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLV 4432
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
Q + ++V CGS T A+S + L
Sbjct: 4433 Q---SLQGKHI-VKVICGSAHTLALSTYQL 4458
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 140 FVSDSGCLFTCGD-GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIA-CGMRHSLVLLKD 196
V C++ D GT L H + + P +V V A C RH L L
Sbjct: 568 IVCAENCVYILTDSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALAS- 626
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
VY +GSG G+LG + LP L D ++ G+ SAA++A G L
Sbjct: 627 --SGDVYSWGSGDGGRLGHGDTSAKE--LPTRIAALADRQVTGVFCGSSYSAAITASGEL 682
Query: 257 YTWGRG------FNSTSDVNCPQSLPSSLSFSQA---ALGWN--HVLVLTGDGEVLMLGG 305
YTWGRG ++ D P +L ++L + ALG H L +T G G
Sbjct: 683 YTWGRGTYGRLGHGNSEDKYVP-TLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGD 741
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L + V ++ P+ V L + S V+++ +G++ S +T + TWG G
Sbjct: 742 GDFGKLGNESCVGTSVPVQVDLPQASC-----VVKVFSGSQFSVALTREGTVYTWGKGHG 796
Query: 366 GQLGLGNTCDQIHPKVVN 383
G+LG GN+ PK+V
Sbjct: 797 GRLGHGNSEHSPVPKMVQ 814
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLA--CGGAHVLALTSPSSVIGGK 92
++++WG GT G+LG G D+ P L+ V +A CG AH L +T G
Sbjct: 681 ELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTE-----AGL 735
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG G G+LG+ V P V + + +G S ++ G ++T G
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVDLPQAS--CVVKVFSGSQFSVALTREGTVYTWGK 793
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G G+LGHG+ P V + K + +A G+ H L L ++YG+G Q
Sbjct: 794 GHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTA---SGELYGWGRNDFQQ 850
Query: 213 L---GVSKDRIRSVSLPQVT 229
+ V++D I ++ P +T
Sbjct: 851 ICPECVTRDPI--ITAPILT 868
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 35/314 (11%)
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGH 124
L V + C V LT +V+ L H M + YP V G
Sbjct: 562 LDQVRQIVCAENCVYILTDSGTVL-------------YLSHAISMTEDNYPAQV---KGL 605
Query: 125 RYTITHISAGW--NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
TI ++A H ++ SG +++ G G G+LGHGD + P ++++ ++ V
Sbjct: 606 ECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTG 665
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ CG +S + ++Y +G G G+LG + V + H + V +
Sbjct: 666 VFCGSSYSAAITA---SGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722
Query: 243 NGDRSAALSAEGHLYTWGRG-FNSTSDVNCP-QSLPSSLSFSQAAL------GWNHVLVL 294
S ++ G + WG G F + +C S+P + QA+ G + L
Sbjct: 723 GDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVAL 782
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +G V G H G L S P + V L+G K++ +A G H +T +
Sbjct: 783 TREGTVYTWGKGHGGRLGHGNSEHSPVP-----KMVQALEGKKIVDLAVGLAHCLALTAS 837
Query: 355 RAIMTWGWGEHGQL 368
+ WG + Q+
Sbjct: 838 GELYGWGRNDFQQI 851
>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
Length = 910
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 156/360 (43%), Gaps = 78/360 (21%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVT--FFDGHRY 126
V +ACG H +T G++F+WG S G+LGHG D + P+ V F +
Sbjct: 262 VHHIACGVRHAALVTRQ-----GEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDF 316
Query: 127 T--------ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
+ ++ G H+ V+ + LFT GDGTFG LGHGD + + P +V S
Sbjct: 317 VACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGL 376
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
+ACG+ H+ + +E++
Sbjct: 377 RTIAVACGVWHTAAV-----------------------------------------VEVI 395
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNS------TSDVNCPQSLPS--SLSFSQAALGWNH 290
+S+A + G L+TWG G + P +P+ +F + A G +
Sbjct: 396 VT-----QSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSL 450
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+ LT G+V +G + +G L +P+ S L +E L G V +IA GA H AV
Sbjct: 451 TVGLTTSGQVCTMGSTVYGQLGNPQ---SDGKLPCFVE--DKLLGECVEEIACGAYHVAV 505
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+T + TWG G +G+LG G+ D+ P +V + ++R + + CGS +T AI H
Sbjct: 506 LTSRNEVYTWGKGANGRLGHGDIEDRKTPTLV---ETLKDRHVKY-IACGSNYTAAICLH 561
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 43/257 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG--GAHVLALT-----SPSS 87
++++WG + G+LG G D + P+L+ + +SV +AC G V ++T +
Sbjct: 280 EIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALV 339
Query: 88 VIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS----- 142
++F++G G+ G LGHG+ + YP+ V G R TI W+ + V
Sbjct: 340 TTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLR-TIAVACGVWHTAAVVEVIVTQ 398
Query: 143 -----DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
SG LFT GDG +LGHGD P V + + N ++ACG HSL +
Sbjct: 399 SSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACG--HSLTVGLTT 456
Query: 198 LGNQVYGFGSGKRGQLG----------VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
G QV GS GQLG +D++ + ++ G + +
Sbjct: 457 SG-QVCTMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHV------------ 503
Query: 248 AALSAEGHLYTWGRGFN 264
A L++ +YTWG+G N
Sbjct: 504 AVLTSRNEVYTWGKGAN 520
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 61/250 (24%)
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVT 229
+ S V +VH IACG+RH+ ++ + +++ +G G+L GV +D I+ P++
Sbjct: 254 LESNVVLDVHHIACGVRHAALVTRQ---GEIFTWGEESGGRLGHGVGRDVIQ----PRLV 306
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN 289
L F S V CP L + G
Sbjct: 307 ESL-----------------------------AFTSVDFVACPL---EGLQVASVTCGPW 334
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H ++T ++ G G+L ++ + P +V +L G++ I +A G H+A
Sbjct: 335 HTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYP-----REVESLSGLRTIAVACGVWHTA 389
Query: 350 -----VVTENRA------IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF 398
+VT++ A + TWG G+ +LG G+ ++ P V E+ + +V
Sbjct: 390 AVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQ----KVA 445
Query: 399 CGSGFTYAIS 408
CG T ++
Sbjct: 446 CGHSLTVGLT 455
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL 82
+V++WG G +G+LG G + D +P L+ V +ACG + A+
Sbjct: 511 EVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAI 558
>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 450
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 175/411 (42%), Gaps = 47/411 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D L PQ L + + + GG H + +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTD-----GGGLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + L G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLLG--CPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SGK 209
FGQLG HG R P + K V +A G+RH+L D +G G SG+
Sbjct: 130 FGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALA-TTDTGSTFQWGTGLASSGR 186
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS---- 265
R G + + P GL +V A D SA+L+ G LY WGR +
Sbjct: 187 RLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS 246
Query: 266 -TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGM----LSDPE- 315
+ + PQ + + + GW H++ T G+V G + +G L PE
Sbjct: 247 LATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRTLGSPEA 306
Query: 316 RVSSTRPLSVALEKVSN--------LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+ + S+A +++ N L G +++ G+EH+ V ++ +WGW EHG
Sbjct: 307 QKHGEQDSSLAFQRLQNSVPSPLHCLTGAA--EVSCGSEHNLAVIRDKCC-SWGWNEHGM 363
Query: 368 LGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR---HCLPSQ 415
G G + P V + L V CG+G + A+ + H P Q
Sbjct: 364 CGDGTESNVWTPTPVQ---ALPSPSRLLLVGCGAGHSLALCQLPAHPAPCQ 411
>gi|440905239|gb|ELR55645.1| Secretion-regulating guanine nucleotide exchange factor, partial
[Bos grunniens mutus]
Length = 338
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 138/302 (45%), Gaps = 45/302 (14%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG- 151
+F+WG S GQLG G D L + ++ F I I+ G HS V+D G LF CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFC-KSGCIKRITGGGGHSAVVTDEGSLFVCGL 75
Query: 152 --DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
DG G LGH + + +P K S + + Q+ACG +++L ++ QV GS
Sbjct: 76 NKDGQLG-LGHTEEVLYFTPCK--SLLGCAIQQVACGWDFTIILTEN---GQVLSCGSNS 129
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV 269
GQLGV R V +PQ I L ++V I+A + A +A G ++ WG G S+
Sbjct: 130 FGQLGVPHGPRRCV-IPQA-IELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRR 187
Query: 270 NCP-QSLP-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSD- 313
CP Q+LP + L SQA G +H LT GE+ + G + HG L+
Sbjct: 188 LCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQ 247
Query: 314 ------PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
P+R+ + K+ + +G H T + TWG ++GQ
Sbjct: 248 AAFLLLPQRI-----------EARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQ 296
Query: 368 LG 369
LG
Sbjct: 297 LG 298
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 136/308 (44%), Gaps = 29/308 (9%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHV 79
+P+ E +++WGA + GQLG G D LS Q L + + + GG H
Sbjct: 2 EPEPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHS 61
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T G +F G GQLG G + LY P G I ++ GW+ +
Sbjct: 62 AVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG--CAIQQVACGWDFTI 114
Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++++G + +CG +FGQLG HG R + + + V IA G+RH+L
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVIP--QAIELLREKVVSIAAGLRHALAATAS- 171
Query: 198 LGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
V+ +G SG+R G + + P GL + + V + A D SA+L+
Sbjct: 172 --GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTD 229
Query: 253 EGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLML 303
G LY WG + + + PQ + + ++ AA+ GW H++ T G+V
Sbjct: 230 AGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 304 GGSHHGML 311
G + +G L
Sbjct: 290 GRADYGQL 297
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 147/328 (44%), Gaps = 26/328 (7%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ SWG G GQLG G + + V + + AG +S + + G LFT G
Sbjct: 8 IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQ--NVCSVVAGSRNSLAICEDGKLFTWGW 65
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G LGH + ++ + P +V + N + Q A G H L + + Y +G + G
Sbjct: 66 NQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQ---GRAYAWGGNEYG 122
Query: 212 QLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
Q G +R R +++PQ + + ++A G S L+ EGH++TWG+ +
Sbjct: 123 QCGEEPERKDDTGRPLRRDITIPQRCA--SKLSVRQVAAGGTHSVVLTREGHVWTWGQPW 180
Query: 264 --NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++ P + A+G H L L DG + G + +G L + ++
Sbjct: 181 PPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQ 240
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P++V L + ++ IAAG HS +T++ + WG GEHG+LG G D K+
Sbjct: 241 PIAV-----QGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFG---DDKSSKM 292
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V + + +++ CG + A++R
Sbjct: 293 VPQKVQLLVEENIVQISCGGTHSVALTR 320
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 155/365 (42%), Gaps = 41/365 (11%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
SWG+G DGQLG G ++ + + +V + G + LA+ GK+F+WG
Sbjct: 10 SWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICED-----GKLFTWG 64
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + I GW H V D G + G +G
Sbjct: 65 WNQRGTLGHPPETKTENIPSQVKALANAKIVQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 122
Query: 157 QLGHGDYRSHSS--PVKVSSFVNK------NVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
Q G R + P++ + + +V Q+A G HS+VL ++ V+ +G
Sbjct: 123 QCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTRE---GHVWTWG-- 177
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNS 265
Q D I+ +S P GL + ++ + A + AL +G L+ WG G
Sbjct: 178 ---QPWPPGD-IKQISTPVRVQGLEKVRLIAVGAF--HNLALLEDGILWAWGNNEYGQLG 231
Query: 266 TSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
T D P+S P S L+ A G H LT DG V G HG L + SS
Sbjct: 232 TGDTQ-PRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSS 290
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
+ +KV L ++QI+ G HS +T + + ++G G+HG+LG G HP
Sbjct: 291 ----KMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHP 346
Query: 380 KVVNL 384
V +
Sbjct: 347 MEVPI 351
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 35 KVWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
K+++WG G LG E P + + + + A GG H LA+ G+
Sbjct: 59 KLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQ-----GRA 113
Query: 94 FSWGRGSSGQLGHGEMVDALYPKP------VTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
++WG GQ G +P + + ++ ++AG HS ++ G +
Sbjct: 114 YAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHV 173
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+T G GD + S+PV+V + V IA G H+L LL+D + ++ +G+
Sbjct: 174 WTWGQ----PWPPGDIKQISTPVRVQGL--EKVRLIAVGAFHNLALLEDGI---LWAWGN 224
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF---- 263
+ GQLG + RS P GL D+ +V I+A G S AL+ +G +Y WGRG
Sbjct: 225 NEYGQLGTGDTQPRS--QPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRL 282
Query: 264 ---NSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ S PQ L + Q + G H + LT DG + G HG L +V+
Sbjct: 283 GFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVT 342
Query: 319 STRPLSVA--LEKVSNLDGVKV------IQIAAGAEHSAVVTE 353
+ P+ V L +NL G +A G H+ + E
Sbjct: 343 TGHPMEVPINLPPATNLSGSGAGGHWCSKLVACGGRHTLAIVE 385
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + P + NLS+ V +ACG H L LTS G+
Sbjct: 105 EVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 158
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT +R + +I+ G S V DSG ++ G
Sbjct: 159 VFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNR-VVVNIACGQMCSMAVVDSGEVYVWGY 217
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G +HS+P ++++ V ++ACG H+LVL D QVY +G+ GQ
Sbjct: 218 NGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDD---GQVYAWGANSYGQ 274
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA + GH+Y WG+
Sbjct: 275 LGTGNKSNQSYPTPVVVEKDRIIEIAACHST-HTSAAKTQGGHVYMWGQ 322
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 27/310 (8%)
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
L + + G VL +T + ++F G G LG G++ + P+ +
Sbjct: 28 LQLIRQACVFGSAGNEVLYMT-----VNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLS 82
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVH 181
G + +G H + G +FT G + QLG+G S P +S+ NK V
Sbjct: 83 GKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVI 141
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
++ACG HSLVL D +V+ +G GQ+G + + +VT L + +V I+
Sbjct: 142 EVACGSYHSLVLTSD---GEVFAWGCNNSGQVGSGSTANQPIP-RRVTGCLQNRVVVNIA 197
Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLV 293
S A+ G +Y WG G S+ + + P + + + + A G+ H LV
Sbjct: 198 CGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLV 257
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVV 351
LT DG+V G + +G L + + + P V +EK ++I+IAA SA
Sbjct: 258 LTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK------DRIIEIAACHSTHTSAAK 311
Query: 352 TENRAIMTWG 361
T+ + WG
Sbjct: 312 TQGGHVYMWG 321
>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
Length = 1043
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 168/370 (45%), Gaps = 50/370 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS----------SVSMLACGGAHVLALTS 84
+++ +G +DGQL Q++ L +V +A G H L L +
Sbjct: 5 QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRYTITHISAGWNHSGFVSD 143
GKV+S G +G+LG G + + Y PV + R I ISAG +HS VSD
Sbjct: 65 -----DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR--IIQISAGRSHSMAVSD 117
Query: 144 SGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
G LF G + GQL GD +P +V S Q+ACG H++ L G +V
Sbjct: 118 DGRLFAWGSNSHGQLAMSGDILISDTPKRVPSL--PETVQVACGASHTVSLNG---GGRV 172
Query: 203 YGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+ +G G++ S + VS+P I+ ISA + AL+A G L+ WGR
Sbjct: 173 FIWGQQSDGRIRHSPAEVELFVSVP----------IIQISAGNLFTMALTASGTLFAWGR 222
Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--D 313
G + DV P+ +P+ S G +H + LT +G V G G L
Sbjct: 223 NEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQ 282
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
P R + + ++ + G V +IA G H+ VV N + T+G +GQLG GNT
Sbjct: 283 PSRSQN------CMRGITEMLGSHVTRIACGRCHTIVVA-NGKMHTFGLNSNGQLGHGNT 335
Query: 374 CDQIHPKVVN 383
+QI P++++
Sbjct: 336 RNQITPRMID 345
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V +A G +H+L L D +V+ GS G+LG + S ++ V I + + I+
Sbjct: 49 VKAVASGEKHTLFLAND---GKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQ 104
Query: 240 ISANGDRSAALSAEGHLYTWGRG----FNSTSDV---NCPQSLPSSLSFSQAALGWNHVL 292
ISA S A+S +G L+ WG + D+ + P+ +PS Q A G +H +
Sbjct: 105 ISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTV 164
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
L G G V + G G R+ + P V L V +IQI+AG + +T
Sbjct: 165 SLNGGGRVFIWGQQSDG------RIRHS-PAEVEL-----FVSVPIIQISAGNLFTMALT 212
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ + WG E GQLG D I+P+ E N ++ + V CG + A++
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR------EVPNINSVVVVECGDSHSIALT 262
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+++WG +GQLG D ++P+ + +++SV ++ CG +H +ALT G+VFS
Sbjct: 217 LFAWGRNEEGQLGNFTNRDVINPR--EVPNINSVVVVECGDSHSIALTHE-----GRVFS 269
Query: 96 WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G S GQLG G+ + + +T G +T I+ G H+ V++ G + T G +
Sbjct: 270 CGSDSFGQLGCGQPSRSQNCMRGITEMLGSH--VTRIACGRCHTIVVAN-GKMHTFGLNS 326
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GQLGHG+ R+ +P + S +NV + G S L
Sbjct: 327 NGQLGHGNTRNQITPRMIDSV--ENVASVFAGWDQSFCL 363
>gi|395815365|ref|XP_003781199.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Otolemur garnettii]
Length = 875
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 157/374 (41%), Gaps = 45/374 (12%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ LN V + GG H +T GG +F G
Sbjct: 438 GANSYGQLGLGHKEDVLLPQQLNDFCKPRCVRRITGGGGHSAIVTD-----GGGLFVCGL 492
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D LY P G I ++ GW+ + ++++G + +CG +FGQL
Sbjct: 493 NKDGQLGLGHTDDVLYFTPCKSLLG--CAIQQVACGWDFTIILTENGQVLSCGSNSFGQL 550
Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----SGKRG 211
G HG R P + + + V IA G+RH+L + V+ +G SG+R
Sbjct: 551 GVPHGPRRC-VVPQAI-ELLREKVVCIAAGLRHALAAT---VSGIVFQWGTGLASSGRRL 605
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNST 266
G + + P GL + + V + A D SA+L+ G +Y WG
Sbjct: 606 CPGNALPLFLTAKEPSRVTGLENCKAVCVVAGSDHSASLTDAGEVYVWGSNKHGQLATQA 665
Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML----------- 311
+ + PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 666 AFLPVPQKIEAHCFQNEKVTAVWSGWTHLVAQTETGKMFTWGRADYGQLGRTLESHEGWK 725
Query: 312 --SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ +RP + + L G +++ G+EH+ V +WGW EHG G
Sbjct: 726 LEKQDSSLPCSRPQNSMPSSLHCLSG--ATEVSCGSEHNLAVIGG-TCYSWGWNEHGMCG 782
Query: 370 LGNTCDQIHPKVVN 383
G + PK V
Sbjct: 783 DGTEDNIWAPKPVQ 796
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 23/175 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGK 92
+V+ WG+ GQL T + PQ + + V+ + G H++A T GK
Sbjct: 649 EVYVWGSNKHGQLATQAAFLPV-PQKIEAHCFQNEKVTAVWSGWTHLVAQTE-----TGK 702
Query: 93 VFSWGRGSSGQLGHG---------EMVDALYP--KPVTFFDGHRYTI---THISAGWNHS 138
+F+WGR GQLG E D+ P +P + + T +S G H+
Sbjct: 703 MFTWGRADYGQLGRTLESHEGWKLEKQDSSLPCSRPQNSMPSSLHCLSGATEVSCGSEHN 762
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
V C ++ G G G G + +P V S + + CG HSL L
Sbjct: 763 LAVIGGTC-YSWGWNEHGMCGDGTEDNIWAPKPVQSLWSSLALLVGCGAGHSLAL 816
>gi|301786789|ref|XP_002928812.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Ailuropoda melanoleuca]
Length = 468
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 168/404 (41%), Gaps = 55/404 (13%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+GA + GQLG G D PQ LN + + GG H +T G +F G
Sbjct: 25 FGANSYGQLGLGHKEDVFLPQQLNDFCKPECIRRITGGGGHSAVVTD-----DGGLFVCG 79
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHR----YTITHISAGWNHSGFVSDSGCLFTCGDG 153
GQLG G D LY F R I ++ GW+ + +++SG + +CG
Sbjct: 80 LNKDGQLGLGHTEDVLY------FTACRSLLDCPIQQVACGWDFTIILTESGQVLSCGSN 133
Query: 154 TFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG---SG 208
+FGQLG HG R + +++ V IA G+RH+L + Q +G G SG
Sbjct: 134 SFGQLGVPHGPRRCMVP--QAIELLSEKVVCIAAGLRHALAATASGIVFQ-WGTGLASSG 190
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS--- 265
+R G + + P GL + + + A D SA+L+ G LY WG +
Sbjct: 191 RRLCPGQTLPPFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLA 250
Query: 266 --TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML-------- 311
+ + PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 251 SLAAFLPMPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLESHE 310
Query: 312 ------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
DP R S P + L G +++ G+EH+ V +WGW EH
Sbjct: 311 DWKLQNQDPSRPCSG-PQKSMPSSLHCLTGAA--EVSCGSEHNLAVI-GGTCYSWGWNEH 366
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G G G+ D PK V + L V CG+G + A+ +
Sbjct: 367 GMCGDGSEADIWAPKPV----QALRSSLGLLVGCGAGHSLALCQ 406
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 24/101 (23%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-----------------LSSLSSVSMLACGGA 77
KV++WG GQLG +L +L N L L+ + ++CG
Sbjct: 290 KVFTWGRADYGQLGR-KLESHEDWKLQNQDPSRPCSGPQKSMPSSLHCLTGAAEVSCGSE 348
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
H LA VIGG +SWG G G G D PKPV
Sbjct: 349 HNLA------VIGGTCYSWGWNEHGMCGDGSEADIWAPKPV 383
>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
Length = 1017
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 154/327 (47%), Gaps = 40/327 (12%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-KPVTFFDGHRY 126
+V +A G H L L + GKV+S G +G+LG G + + Y PV + R
Sbjct: 48 TVKAVASGEKHTLFLAN-----DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVR- 101
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIAC 185
I ISAG +HS VSD G LF G + GQL GD +P +V S Q+AC
Sbjct: 102 -IIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSL--PETVQVAC 158
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR-SVSLPQVTIGLHDIEIVGISANG 244
G H++ L G +V+ +G G++ S + VS+P I+ ISA
Sbjct: 159 GASHTVSLNG---GGRVFIWGQQSDGRIRHSPAEVELFVSVP----------IIQISAGN 205
Query: 245 DRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
+ AL+A G L+ WGR G + DV P+ +P+ S G +H + LT +G
Sbjct: 206 LFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEG 265
Query: 299 EVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
V G G L P R + + ++ + G V +IA G H+ VV N
Sbjct: 266 RVFSCGSDSFGQLGCGQPSRSQN------CMRGITEMLGSHVTRIACGRCHTIVVA-NGK 318
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ T+G +GQLG GNT +QI P++++
Sbjct: 319 MHTFGLNSNGQLGHGNTRNQITPRMID 345
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V +A G +H+L L D +V+ GS G+LG + S ++ V I + + I+
Sbjct: 49 VKAVASGEKHTLFLAND---GKVWSCGSNYNGELGRGGVKEGSYTIYPVHIS-NAVRIIQ 104
Query: 240 ISANGDRSAALSAEGHLYTWGRG----FNSTSDV---NCPQSLPSSLSFSQAALGWNHVL 292
ISA S A+S +G L+ WG + D+ + P+ +PS Q A G +H +
Sbjct: 105 ISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTV 164
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
L G G V + G G R+ + P V L V +IQI+AG + +T
Sbjct: 165 SLNGGGRVFIWGQQSDG------RIRHS-PAEVEL-----FVSVPIIQISAGNLFTMALT 212
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ + WG E GQLG D I+P+ E N ++ + V CG + A++
Sbjct: 213 ASGTLFAWGRNEEGQLGNFTNRDVINPR------EVPNINSVVVVECGDSHSIALT 262
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+++WG +GQLG D ++P+ + +++SV ++ CG +H +ALT G+VFS
Sbjct: 217 LFAWGRNEEGQLGNFTNRDVINPR--EVPNINSVVVVECGDSHSIALTHE-----GRVFS 269
Query: 96 WGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G S GQLG G+ + + +T G +T I+ G H+ V++ G + T G +
Sbjct: 270 CGSDSFGQLGCGQPSRSQNCMRGITEMLGSH--VTRIACGRCHTIVVAN-GKMHTFGLNS 326
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GQLGHG+ R+ +P + S +NV + G S L
Sbjct: 327 NGQLGHGNTRNQITPRMIDSV--ENVASVFAGWDQSFCL 363
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 30/297 (10%)
Query: 36 VWSWGAGTDGQLGTGR-LHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++S G G+ G LG + + D E+ P+ + ++ L+ G H + T +
Sbjct: 97 LYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKG------L 150
Query: 94 FSWGRGSSGQLGHGEMVDALY--------PKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
FSWGR GQL +GE+ + P+ + D I + +G +HS ++ G
Sbjct: 151 FSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLNKDG 210
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKV---SSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
+++ G G FG G G + ++P K+ NK V IACG HSL+L D N++
Sbjct: 211 TVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSD---NEI 267
Query: 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE--GHLYTWG 260
Y FG G+ GQLG S++ ++ P+ ++ + G + + + G +Y+WG
Sbjct: 268 YSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFAGSHATSFYVDEKGDVYSWG 327
Query: 261 ------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
GF +V P + S + + A G+ H L LT D +V + G + G L
Sbjct: 328 WGEGGTLGFGDNQNVYVPTQVKSLSNIKKIAAGFKHTLALTNDNQVYVFGDNTFGQL 384
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM---LACGGAHVLALTSPSSVIGGK 92
V+SWG G G G G+ + +P + + + +ACGG H L LTS + +
Sbjct: 212 VYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSDN-----E 266
Query: 93 VFSWGRGSSGQLGHGEMVDALY--PKPVTFFDGHRYTITHISAGWNHSGF-VSDSGCLFT 149
++S+G G GQLGH E Y PK + + I + AG + + F V + G +++
Sbjct: 267 IYSFGWGEYGQLGHSENDTKNYYSPKKIESINSST-KIKSVFAGSHATSFYVDEKGDVYS 325
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G G G LG GD ++ P +V S N+ +IA G +H+L L D NQVY FG
Sbjct: 326 WGWGEGGTLGFGDNQNVYVPTQVKSL--SNIKKIAAGFKHTLALTND---NQVYVFGDNT 380
Query: 210 RGQLGVSKDRI 220
GQLG ++ +
Sbjct: 381 FGQLGSKQNNV 391
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
+ GG +L LT I ++S G+GS G LG + + L +P I +S
Sbjct: 82 SLGGNFILMLT-----IDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLS 136
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH--------SSP--VKVSSFVNKNVHQ 182
+G+ HS +D G LF+ G GQL +G+ +S S P +K S +N+ +
Sbjct: 137 SGYEHSIVTTDKG-LFSWGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKK 195
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGIS 241
+ G HSLVL KD VY +G G G G+ KD + + + Q L + ++ I+
Sbjct: 196 VCSGSDHSLVLNKDG---TVYSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIA 252
Query: 242 ANGDRSAALSAEGHLYTWGRG--------FNSTSDVNCPQSLPS--SLSFSQAALGWNHV 291
G S L+++ +Y++G G N T + P+ + S S + ++ +H
Sbjct: 253 CGGYHSLILTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKIESINSSTKIKSVFAGSHA 312
Query: 292 LVLTGD--GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
D G+V G G L + + P +V +L +K +IAAG +H+
Sbjct: 313 TSFYVDEKGDVYSWGWGEGGTLGFGDNQNVYVPT-----QVKSLSNIK--KIAAGFKHTL 365
Query: 350 VVTENRAIMTWGWGEHGQLG 369
+T + + +G GQLG
Sbjct: 366 ALTNDNQVYVFGDNTFGQLG 385
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 26/257 (10%)
Query: 147 LFTCGDGTFGQLGHGDYRS--HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L++ G G++G LG P ++ + N+N+ ++ G HS+V L +
Sbjct: 97 LYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTTDKGL----FS 152
Query: 205 FGSGKRGQLGVS------KDRIRSVSLPQVTIGLHDI--EIVGISANGDRSAALSAEGHL 256
+G +GQL KD+I S PQ I + + D S L+ +G +
Sbjct: 153 WGRSDKGQLANGELKSEIKDQINYSSKPQFIKNSDSTFRNIKKVCSGSDHSLVLNKDGTV 212
Query: 257 YTWGRGFNSTSDVNCPQSL--PSSLSFSQA---------ALGWNHVLVLTGDGEVLMLGG 305
Y+WG G+ + + ++ P+ + F++ A G H L+LT D E+ G
Sbjct: 213 YSWGHGYFGATGLGKKDNVATPTKIQFNKELENKLVLDIACGGYHSLILTSDNEIYSFGW 272
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+G L E + +E +++ +K + A S V E + +WGWGE
Sbjct: 273 GEYGQLGHSENDTKNYYSPKKIESINSSTKIKSV-FAGSHATSFYVDEKGDVYSWGWGEG 331
Query: 366 GQLGLGNTCDQIHPKVV 382
G LG G+ + P V
Sbjct: 332 GTLGFGDNQNVYVPTQV 348
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+L + N +Y G G G LG+ K+ P+ L + I+ +S+ + S +
Sbjct: 87 FILMLTIDNDLYSMGKGSYGVLGLDKEMKDLEVEPKRIETLKNRNIISLSSGYEHSIVTT 146
Query: 252 AEGHLYTWGRG-----------------FNSTSDVNCPQSLPSSLS----FSQAALGWNH 290
+G L++WGR N +S PQ + +S S + G +H
Sbjct: 147 DKG-LFSWGRSDKGQLANGELKSEIKDQINYSSK---PQFIKNSDSTFRNIKKVCSGSDH 202
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
LVL DG V G + G ++ + P + K L+ V+ IA G HS +
Sbjct: 203 SLVLNKDGTVYSWGHGYFGATGLGKKDNVATPTKIQFNK--ELENKLVLDIACGGYHSLI 260
Query: 351 VTENRAIMTWGWGEHGQLG--LGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCGS 401
+T + I ++GWGE+GQLG +T + PK + E N T+++ VF GS
Sbjct: 261 LTSDNEIYSFGWGEYGQLGHSENDTKNYYSPKKI----ESINSSTKIKSVFAGS 310
>gi|397494815|ref|XP_003818266.1| PREDICTED: uncharacterized protein LOC100982654 [Pan paniscus]
Length = 885
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 170/400 (42%), Gaps = 49/400 (12%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 448 GANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGL 502
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQL
Sbjct: 503 NKDGQLGLGHTEDIPYFTPCKSLFG--CAIQQVACGWDFTIMLTENGQVLSCGSNSFGQL 560
Query: 159 G--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG-----KRG 211
G HG R + F + V IA G+RH+L + V+ +G+G +R
Sbjct: 561 GVPHGPRRCVVP--QAIEFHKEKVVCIAAGLRHALAATASGI---VFQWGTGLAPCGRRL 615
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNST 266
G + + P GL + + + + A D SA+L+ G +Y WG N
Sbjct: 616 CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA 675
Query: 267 SDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-------- 314
+ + PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 676 AFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWK 735
Query: 315 -ERVSSTRPLSVALEKVSN----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
E+ S P S + + L G +++ G+EH+ + +WGW EHG G
Sbjct: 736 LEKQDSFLPCSRPPNSMPSSPHCLTGA--TEVSCGSEHNLAII-GGVCYSWGWNEHGMCG 792
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G + PK V + + L V CG+G + A+ +
Sbjct: 793 DGTEANVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 828
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 172/391 (43%), Gaps = 57/391 (14%)
Query: 29 EEQQVVKVWSWGAGTDGQLGTGRLHDELSP----QLLNLSSLSSVSMLACGGAHVLALTS 84
+ +++ +++SWG GQ + P QL+N+ V +A G +HVLA+
Sbjct: 91 QSERLPQIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQL--RVLAMASGDSHVLAIVH 148
Query: 85 PSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
P G +V++WG GQLG G+ + P P+ T +S G HS +S+
Sbjct: 149 P----GNQVYAWGCNRWGQLGTGDQTNRATPTPIAI--ATPTVFTSVSCGAQHSMALSNY 202
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G L++ G GT G+ GHG SP VS+ V K + +A GM HS D G+ VY
Sbjct: 203 GELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAAT--DLRGS-VYT 259
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---- 260
+G K GQLG + + P + +V ++ + + L+AEGH+Y++G
Sbjct: 260 WGWNKYGQLG--NNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVC 317
Query: 261 --RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML------- 311
G +D P+ + G+ H L LT G V G G L
Sbjct: 318 GQLGVGGYADSQQPKKVDLPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAG 377
Query: 312 --SDPERVSSTRPLSVALEKVSN-LDGVKVI-------------------QIAAGAEHSA 349
S P+ + PLS S+ +D I +IAAGA +SA
Sbjct: 378 HQSKPKLI----PLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSA 433
Query: 350 VVTENRAIMTWGWGEHGQLGLG-NTCDQIHP 379
++T + + +G+G+ ++G G NT DQ P
Sbjct: 434 IITTSGKLYCFGFGDSYRIGNGTNTEDQDIP 464
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 15/246 (6%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+++ G FGQ P +V +N + +A S VL GNQVY +G
Sbjct: 98 IYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAWG 157
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
+ GQLG R+ P + I + +S S ALS G LY+WG
Sbjct: 158 CNRWGQLGTGDQTNRATPTP-IAIATPTV-FTSVSCGAQHSMALSNYGELYSWGCGTGGR 215
Query: 261 RGFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G S + PQ + + + + A G H G V G + +G L +
Sbjct: 216 TGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGN----- 270
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
+T ++ K+ +++ V+++ G H+ ++T I ++G+ GQLG+G D
Sbjct: 271 NTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQ 330
Query: 379 PKVVNL 384
PK V+L
Sbjct: 331 PKKVDL 336
>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 134/310 (43%), Gaps = 43/310 (13%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WGR G+L G PK V T+ IS+G NHSG V+ G LF CG
Sbjct: 17 LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQ--TVQLISSGSNHSGIVTQDGQLFICGS 74
Query: 153 GTFGQLGHGDYRSHSSP--VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G+LG D S P + V + V Q+A G H+L LL + QVY +G
Sbjct: 75 ALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDN---GQVYAWGGTLH 131
Query: 211 GQLGVSK---DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW---GRGFN 264
+LG RI ++ V IG D SAALSA G LYTW GR +N
Sbjct: 132 KKLGSKAGKPARIETLKQTIVQIGCGDF----------HSAALSANGDLYTWGGGGRDYN 181
Query: 265 S-------TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+DV PQ + ++ + + G H++ L DGE+ G +G E
Sbjct: 182 RGQLGHGHLNDVETPQIVKDNI--VKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQ 239
Query: 318 SSTRPLSVALE-----------KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
S P V + V N + +I+ G HS +++ + G+ +HG
Sbjct: 240 DSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHG 299
Query: 367 QLGLGNTCDQ 376
QLG+ T +Q
Sbjct: 300 QLGIKATENQ 309
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLS----------------SLSSVSMLACGGAH 78
++WSWG+G G+ G G D L P+ + ++ S++ ++ GG H
Sbjct: 221 ELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHH 280
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
L L++ G V++ G GQLG + + V G TI I+AGWNHS
Sbjct: 281 SLLLSNK-----GIVYACGYAQHGQLGIKATENQNKFQLVIGISGK--TIVQIAAGWNHS 333
Query: 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
++ ++TCG GQLG GDY S + +++ + + Q+ G HS L+
Sbjct: 334 IVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGNHSWALI 389
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 135/336 (40%), Gaps = 67/336 (19%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 318 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 370
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 371 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 430
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 431 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 485
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 486 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 507
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 508 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 556
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V Q + V CGS T A S
Sbjct: 557 TNAIQRPRLVA---ALQGKKVN-RVACGSAHTLAWS 588
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 384
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 385 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 444
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 445 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 501
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 502 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 545
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 280
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 281 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 337
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 338 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 395
Query: 264 NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 396 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 455
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 456 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 510
Query: 379 PKVVN 383
P+ V
Sbjct: 511 PRQVQ 515
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 225 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 280
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 281 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 340
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 341 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 395
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 396 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 424
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 540 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 598
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 44/337 (13%)
Query: 93 VFSWGRGSSGQLGHG--------EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
V +WG G GQLG G +V+AL P + + + G +S + D
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEP----------FNVRSVVGGSRNSLAICDD 56
Query: 145 GCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G LFT G G LGH + ++ S+P V S + + Q A G H L + D G + Y
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAV--DDQG-RAY 113
Query: 204 GFGSGKRGQLG--VSKDRI-----RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+G + GQ G SKD R + +P+ + + ++A G S L+ EG++
Sbjct: 114 AWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--PQLTVRQVAAGGTHSVVLTREGYV 171
Query: 257 YTWGRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+TWG+ + ++ P + + A+G H L L DG + G + +G L
Sbjct: 172 WTWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLG-- 229
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT- 373
T+P S + V LD + ++ IAAG HS +T + WG GEHG+LG G+
Sbjct: 230 --TGDTQPRSFPI-PVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286
Query: 374 -CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ VNL D ++V CG + A++R
Sbjct: 287 KSSKMLPQKVNL---LAGEDI-IQVSCGGTHSVALTR 319
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 169/399 (42%), Gaps = 51/399 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ ++ +V + G + LA+ GK+F+WG
Sbjct: 9 AWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDD-----GKLFTWG 63
Query: 98 RGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G LGH E P V + I GW H V D G + G +G
Sbjct: 64 WNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNEYG 121
Query: 157 QLGHGDYRSHS-SPVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
Q G + + PV+ + K V Q+A G HS+VL ++ V+ +G
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTRE---GYVWTWG--- 175
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFNST 266
Q D I+ +S+P GL ++ ++ + A + AL +G L+ WG G T
Sbjct: 176 --QPWPPGD-IKQISIPVRVQGLENVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGT 230
Query: 267 SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
D P+S P L+ A G H LT +GEV G HG L + S+
Sbjct: 231 GDTQ-PRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSS 289
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP- 379
+ L +KV+ L G +IQ++ G HS +T + I ++G G+HG+LG G P
Sbjct: 290 KMLP---QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346
Query: 380 ----KVVNLGDEFQNRDTQLE-------VFCGSGFTYAI 407
+ L F + D + + V CG T AI
Sbjct: 347 ELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAI 385
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 37/242 (15%)
Query: 35 KVWSWGAGTDGQLG-------TGR-------LHDELSPQLLNLSSLSSVSMLACGGAHVL 80
+ ++WG GQ G TGR + +PQL +V +A GG H +
Sbjct: 111 RAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAPQL-------TVRQVAAGGTHSV 163
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGF 140
LT G V++WG+ G++ P V + R I+ G H+
Sbjct: 164 VLTRE-----GYVWTWGQ----PWPPGDIKQISIPVRVQGLENVRL----IAVGAFHNLA 210
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
+ + G L+ G+ +GQLG GD + S P+ V + + IA G HS L +
Sbjct: 211 LKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNE---G 267
Query: 201 QVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+VYG+G G+ G+LG + S LPQ L +I+ +S G S AL+ +G ++++G
Sbjct: 268 EVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Query: 261 RG 262
RG
Sbjct: 328 RG 329
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 27/179 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLGTG P + L L+ V +A GG H ALT+ G+V+
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVD-IAAGGWHSTALTNE-----GEVY 270
Query: 95 SWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
WGRG G+LG G+ + P+ V G I +S G HS ++ G +F+ G
Sbjct: 271 GWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGE--DIIQVSCGGTHSVALTRDGRIFSFGR 328
Query: 153 GTFGQLGHGDYRSHSSPVKVS--------SFVNKN--------VHQIACGMRHSLVLLK 195
G G+LG+G + P+++ F + + +ACG RH+L +++
Sbjct: 329 GDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 117/227 (51%), Gaps = 16/227 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V + G G+ G+LG G +++ + LN S ++ +S H LALTS G+V
Sbjct: 427 VRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSE-----GQV 481
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
FSWG G G+LGHG + YPK + + + ISAG+ HS V+D G L+T G+G
Sbjct: 482 FSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVC-ISAGYRHSACVTDDGQLYTWGEG 540
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHGD S + P V NV ++ CG H++ + +D V+ FG G G+L
Sbjct: 541 DYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQD--SRTVWSFGGGDNGKL 596
Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
G +RI + + IGL I + S AL++ G L T+
Sbjct: 597 GHGDTNRIYKPKIIESLIGLF---IKKVGCGSQSSLALTSTGQLCTF 640
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 69/306 (22%)
Query: 85 PSSVI---GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
P+S++ +VF WG SS QL G L PK F + I AG + +
Sbjct: 366 PNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQ----QIEAGQYCTFVI 421
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---HSLVLLKDCL 198
S G + CG G++G+LG GD + + +K +F N + +I+ H+L L +
Sbjct: 422 SSDGSVRACGKGSYGRLGLGDSNNQTQ-LKKLNFDNSIITRISSSKGSDGHTLALTSE-- 478
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLY 257
QV+ +G G G+LG + P+V +G L +V ISA
Sbjct: 479 -GQVFSWGDGDYGKLG--HGNTLTQKYPKVILGVLMGKVVVCISA--------------- 520
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G+ H +T DG++ G +G L +
Sbjct: 521 -----------------------------GYRHSACVTDDGQLYTWGEGDYGRLGHGD-- 549
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
S++R + ++ VSN V ++ G+ H+ AV ++R + ++G G++G+LG G+T
Sbjct: 550 SNSRNVPTLVKDVSN-----VGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRI 604
Query: 377 IHPKVV 382
PK++
Sbjct: 605 YKPKII 610
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG+ + QL G L P++ S + + G ++S G V
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKILLPKMA--ISFAESQQIEAGQYCTFVISS-----DGSVR 428
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G+GS G+LG G+ + K + F + I+ H+ ++ G +F+ GDG
Sbjct: 429 ACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGD 488
Query: 155 FGQLGHGDYRSHSSP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ + P V + + K V I+ G RHS + D Q+Y +G G G+L
Sbjct: 489 YGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDD---GQLYTWGEGDYGRL 545
Query: 214 GVSKDRIRSV 223
G R+V
Sbjct: 546 GHGDSNSRNV 555
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 200 NQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
++V+ +GS QL S+++I LP++ I + + I A + +S++G +
Sbjct: 375 SEVFVWGSNSSHQLAEGSQEKIL---LPKMAISFAESQ--QIEAGQYCTFVISSDGSVRA 429
Query: 259 WGRGF----------NST--SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
G+G N T +N S+ + +S S+ + G H L LT +G+V G
Sbjct: 430 CGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDG--HTLALTSEGQVFSWGDG 487
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
+G L ++ P + + L G V+ I+AG HSA VT++ + TWG G++G
Sbjct: 488 DYGKLGHGNTLTQKYPKVI----LGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYG 543
Query: 367 QLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTYAISR 409
+LG G++ + P +V N+G +V CGS T A+S+
Sbjct: 544 RLGHGDSNSRNVPTLVKDVSNVG----------KVVCGSSHTIAVSQ 580
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 33/334 (9%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G + +WG G GQLG G + + + + + + AG +S +++ G LFT
Sbjct: 4 GTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQ--NVCSVVAGSRNSLAITEDGKLFT 61
Query: 150 CGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G G LGH +S + P +V + N + Q A G H L + + Y +G
Sbjct: 62 WGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQ---GRAYAWGGN 118
Query: 209 KRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ GQ G ++ R +++PQ + + ++A G S L+ EGH++TWG
Sbjct: 119 EYGQCGEEPEKKDNTGRPPRRDIAIPQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 261 RGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ + + ++ P + A+G H L L DG + G + +G L +
Sbjct: 177 QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT--CDQ 376
++P+ V L G+ ++ IAAG HS +T+N + WG GEHG+LG G+ +
Sbjct: 237 RSQPIPV-----QGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 377 IHPKVVNL--GDEFQNRDTQLEVFCGSGFTYAIS 408
+ P+ V L G+E +++ CG + A++
Sbjct: 292 MVPQKVQLLSGEEI------VQISCGGTHSVAVT 319
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 162/369 (43%), Gaps = 48/369 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFS 95
+WG+G DGQLG G ++E + + +L S V + G + LA+T GK+F+
Sbjct: 9 AWGSGEDGQLGLG--NNEEREWVCAIKALESQNVCSVVAGSRNSLAITED-----GKLFT 61
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G LGH + P V + I GW H V D G + G
Sbjct: 62 WGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNE 119
Query: 155 FGQLGHGDYRSHSS--PVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFG 206
+GQ G + ++ P + + + V Q+A G HS+VL ++ V+ +G
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTRE---GHVWTWG 176
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
Q D I +S+P GL + ++ + A + AL +G L+ WG G
Sbjct: 177 -----QPWPPGD-ITQISVPVRVQGLDMVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQ 228
Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--DPE 315
T D P+S P S L+ A G H LT +GEV G HG L D +
Sbjct: 229 LGTGDTQ-PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDND 287
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ S P +KV L G +++QI+ G HS VT + + ++G G+HG+LG G
Sbjct: 288 KSSKMVP-----QKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVT 342
Query: 376 QIHPKVVNL 384
P+ V +
Sbjct: 343 TGQPEEVPI 351
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 35/312 (11%)
Query: 35 KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
K+++WG G LG G + + Q+ LS++ V A GG H LA+ G+
Sbjct: 58 KLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQA-AIGGWHCLAVDDQ-----GR 111
Query: 93 VFSWGRGSSGQLGH-GEMVDALYPKP-----VTFFDGHRYTITHISAGWNHSGFVSDSGC 146
++WG GQ G E D P + + + ++AG HS ++ G
Sbjct: 112 AYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGH 171
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++T G GD S PV+V V IA G H+L L +D ++ +G
Sbjct: 172 VWTWGQ----PWPPGDITQISVPVRVQGL--DMVRLIAVGAFHNLALQED---GTLWAWG 222
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
+ + GQLG + RS +P GL + +V I+A G S AL+ G +Y WGRG
Sbjct: 223 NNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 264 -----NSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
N S PQ L S Q + G H + +T DG + G HG L +
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 317 VSSTRPLSVALE 328
V++ +P V ++
Sbjct: 341 VTTGQPEEVPID 352
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
Q+ +W+WG GQLGTG P + LS L+ V +A GG H ALT
Sbjct: 213 QEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHSTALTD----- 266
Query: 90 GGKVFSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+V+ WGRG G+LG G+ + P+ V G I IS G HS V+ G +
Sbjct: 267 NGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE--IVQISCGGTHSVAVTSDGRM 324
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFV------NKNVHQIA----CGMRHSLVLLK 195
F+ G G G+LG+G + P +V + +N H IA CG RH+L L++
Sbjct: 325 FSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQ 382
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 163/332 (49%), Gaps = 26/332 (7%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V S G + GQLG G EL + L +L+ V +++CG H LA+ G+V
Sbjct: 43 RVLSCGDNSRGQLGRRGAPRGELPEPIQALETLN-VDLVSCGKEHSLAVCH-----KGRV 96
Query: 94 FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GS GQLG GE+ + + PK +T +G + I +S G HS +S +F+ G
Sbjct: 97 FAWGAGSEGQLGIGELKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L +G+GS G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAG 211
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QL +S + S +++G L ++ +V IS + +A L+ +G ++T+G G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
T + PQ + SQ G H L G+V+ G S G + PE ++
Sbjct: 272 PTPEKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTEN 331
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+S L +L GV+V I AG + V T
Sbjct: 332 FDIS-CLISAEDLVGVQVKHIFAGTYANFVTT 362
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 32/290 (11%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G HS + + + +CGD + GQLG P + + NV ++CG HSL
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSL 88
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAAL 250
+ C +V+ +G+G GQLG+ + ++ +S P+ L+ I+I+ +S S AL
Sbjct: 89 AV---CHKGRVFAWGAGSEGQLGIGE--LKEISFTPKKITTLNGIKIIQVSCGHYHSLAL 143
Query: 251 SAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGE 299
S + +++WG+ NS + + PS S +Q A G H L+ G
Sbjct: 144 SKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 300 VLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G L+ R V S +PLSV L + V+ I+ GAEH+AV+T++
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGAEHTAVLTQDGK 256
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ T+G GQLG T ++ P++V + D + +V CGS T A
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-----QVDCGSYHTLA 301
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 33/334 (9%)
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G + +WG G GQLG G + + + + + + AG +S +++ G LFT
Sbjct: 4 GTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQ--NVCSVVAGSRNSLAITEDGKLFT 61
Query: 150 CGDGTFGQLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G G LGH +S + P +V + N + Q A G H L + + Y +G
Sbjct: 62 WGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQ---GRAYAWGGN 118
Query: 209 KRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ GQ G ++ R +++PQ + + ++A G S L+ EGH++TWG
Sbjct: 119 EYGQCGEEPEKKDNTGRPPRRDIAIPQRCA--PKLIVRQVAAGGTHSVVLTREGHVWTWG 176
Query: 261 RGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ + + ++ P + A+G H L L DG + G + +G L +
Sbjct: 177 QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 236
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT--CDQ 376
++P+ V L G+ ++ IAAG HS +T+N + WG GEHG+LG G+ +
Sbjct: 237 RSQPIPV-----QGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 377 IHPKVVNL--GDEFQNRDTQLEVFCGSGFTYAIS 408
+ P+ V L G+E +++ CG + A++
Sbjct: 292 MVPQKVQLLSGEEI------VQISCGGTHSVAVT 319
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 162/369 (43%), Gaps = 48/369 (13%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFS 95
+WG+G DGQLG G ++E + + +L S V + G + LA+T GK+F+
Sbjct: 9 AWGSGEDGQLGLG--NNEEREWVCAIKALESQNVCSVVAGSRNSLAITED-----GKLFT 61
Query: 96 WGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G LGH + P V + I GW H V D G + G
Sbjct: 62 WGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAI-GGW-HCLAVDDQGRAYAWGGNE 119
Query: 155 FGQLGHGDYRSHSS--PVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYGFG 206
+GQ G + ++ P + + + V Q+A G HS+VL ++ V+ +G
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTRE---GHVWTWG 176
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GF 263
Q D I +S+P GL + ++ + A + AL +G L+ WG G
Sbjct: 177 -----QPWPPGD-ITQISVPVRVQGLDMVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQ 228
Query: 264 NSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--DPE 315
T D P+S P S L+ A G H LT +GEV G HG L D +
Sbjct: 229 LGTGDTQ-PRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDND 287
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ S P +KV L G +++QI+ G HS VT + + ++G G+HG+LG G
Sbjct: 288 KSSKMVP-----QKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVT 342
Query: 376 QIHPKVVNL 384
P+ V +
Sbjct: 343 TGQPEEVPI 351
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 35/312 (11%)
Query: 35 KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
K+++WG G LG G + + Q+ LS++ V A GG H LA+ G+
Sbjct: 58 KLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQA-AIGGWHCLAVDDQ-----GR 111
Query: 93 VFSWGRGSSGQLGH-GEMVDALYPKP-----VTFFDGHRYTITHISAGWNHSGFVSDSGC 146
++WG GQ G E D P + + + ++AG HS ++ G
Sbjct: 112 AYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGH 171
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
++T G GD S PV+V V IA G H+L L +D ++ +G
Sbjct: 172 VWTWGQ----PWPPGDITQISVPVRVQGL--DMVRLIAVGAFHNLALQED---GTLWAWG 222
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF--- 263
+ + GQLG + RS +P GL + +V I+A G S AL+ G +Y WGRG
Sbjct: 223 NNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 264 -----NSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
N S PQ L S Q + G H + +T DG + G HG L +
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 317 VSSTRPLSVALE 328
V++ +P V ++
Sbjct: 341 VTTGQPEEVPID 352
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 21/178 (11%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
Q+ +W+WG GQLGTG P + LS L+ V +A GG H ALT
Sbjct: 213 QEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD-IAAGGWHSTALTD----- 266
Query: 90 GGKVFSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+V+ WGRG G+LG G+ + P+ V G I IS G HS V+ G +
Sbjct: 267 NGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE--IVQISCGGTHSVAVTSDGRM 324
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFV------NKNVHQIA----CGMRHSLVLLK 195
F+ G G G+LG+G + P +V + +N H IA CG RH+L L++
Sbjct: 325 FSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQ 382
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 37/336 (11%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+ +WG G GQLG G + + V HR I + AG +S ++D G LFT G
Sbjct: 7 IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHR--IRSVVAGSRNSLAIADDGKLFTWGW 64
Query: 153 GTFGQLGH-----GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
LGH + ++ ++P +V + + + Q A G H L + D G + Y +G
Sbjct: 65 NQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAV--DDQG-RAYAWGG 121
Query: 208 GKRGQLGVSKDRI--------RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+ GQ G +R R + +PQ + + ++A G S L+ EGH++TW
Sbjct: 122 NEYGQCGEEPERKDGTGRPLRRDIEIPQRCA--PKLVVRQVAAGGTHSVVLTREGHVWTW 179
Query: 260 GRGF--NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G+ + ++ P + + A+G H L L DG + G + +G L +
Sbjct: 180 GQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQ 239
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT--CD 375
++P+ +V L + ++ IAAG HS +T+ + WG GEHG+LG G++
Sbjct: 240 PRSQPI-----RVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSS 294
Query: 376 QIHPKVVNL--GDEFQNRDTQLEVFCGSGFTYAISR 409
++ P+ V L G++ ++V CG + A++R
Sbjct: 295 KMVPQKVQLLAGEDI------VQVSCGGTHSVALTR 324
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 156/371 (42%), Gaps = 48/371 (12%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
+WG+G DGQLG G ++ L+ + + G + LA+ GK+F+WG
Sbjct: 9 AWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIAD-----DGKLFTWG 63
Query: 98 RGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
LGH E P V + I GW H V D G + G
Sbjct: 64 WNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAI-GGW-HCLAVDDQGRAYAWGG 121
Query: 153 GTFGQLGHGDYRSHSS--PVKVSSFVNKN------VHQIACGMRHSLVLLKDCLGNQVYG 204
+GQ G R + P++ + + V Q+A G HS+VL ++ V+
Sbjct: 122 NEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTRE---GHVWT 178
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
+G Q D I+ +S+P GL ++ ++ + A + AL +G L+ WG
Sbjct: 179 WG-----QPWPPGD-IKQISVPVRVQGLENVRLIAVGAF--HNLALQEDGTLWAWGNNEY 230
Query: 262 GFNSTSDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS--D 313
G T D P+S P S L+ A G H LT +GEV G HG L D
Sbjct: 231 GQLGTGDTQ-PRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD 289
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
++ S P +KV L G ++Q++ G HS +T + + ++G G+HG+LG G
Sbjct: 290 SDKSSKMVP-----QKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRK 344
Query: 374 CDQIHPKVVNL 384
P V +
Sbjct: 345 VTTGQPMEVPI 355
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 62 NLSSLSSVSML--ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-- 117
+ +LSSV ++ A GG H LA+ G+ ++WG GQ G +P
Sbjct: 88 QVKALSSVKIVQAAIGGWHCLAVDDQ-----GRAYAWGGNEYGQCGEEPERKDGTGRPLR 142
Query: 118 ----VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
+ + + ++AG HS ++ G ++T G GD + S PV+V
Sbjct: 143 RDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQ 198
Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH 233
+NV IA G H+L L +D ++ +G+ + GQLG + RS P GL
Sbjct: 199 GL--ENVRLIAVGAFHNLALQED---GTLWAWGNNEYGQLGTGDTQPRS--QPIRVQGLS 251
Query: 234 DIEIVGISANGDRSAALSAEGHLYTWGRGF--------NSTSDVNCPQS--LPSSLSFSQ 283
D+ +V I+A G S AL+ EG +Y WGRG + S PQ L + Q
Sbjct: 252 DLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQ 311
Query: 284 AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
+ G H + LT DG + G HG L +V++ +P+ V ++
Sbjct: 312 VSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRKVTTGQPMEVPID 356
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%), Gaps = 44/274 (16%)
Query: 35 KVWSWGAGTDGQLG--------TGR-------LHDELSPQLLNLSSLSSVSMLACGGAHV 79
+ ++WG GQ G TGR + +P+L+ V +A GG H
Sbjct: 115 RAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLV-------VRQVAAGGTHS 167
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+ LT G V++WG+ G++ P V + R I+ G H+
Sbjct: 168 VVLTRE-----GHVWTWGQ----PWPPGDIKQISVPVRVQGLENVRL----IAVGAFHNL 214
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
+ + G L+ G+ +GQLG GD + S P++V + + IA G HS L +
Sbjct: 215 ALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDE--- 271
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+VYG+G G+ G+LG S +PQ L +IV +S G S AL+ +GH++++
Sbjct: 272 GEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSF 331
Query: 260 GR------GFNSTSDVNCPQSLPSSLSFSQAALG 287
GR G+ P +P L Q G
Sbjct: 332 GRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSG 365
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
Q+ +W+WG GQLGTG P ++ LS L+ V +A GG H ALT
Sbjct: 217 QEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVD-IAAGGWHSTALTDE---- 271
Query: 90 GGKVFSWGRGSSGQLGHGE--MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
G+V+ WGRG G+LG G+ + P+ V G I +S G HS ++ G +
Sbjct: 272 -GEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGE--DIVQVSCGGTHSVALTRDGHM 328
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVS---------SFVNKNVHQIA----CGMRHSLVLL 194
F+ G G G+LG+G + P++V S H IA CG RH+L ++
Sbjct: 329 FSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKLVACGGRHTLAIV 388
Query: 195 K 195
+
Sbjct: 389 E 389
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 200 NQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
+ + +GSG+ GQLG+ S + V L + L I + A S A++ +G L+T
Sbjct: 5 SHIIAWGSGEDGQLGIGSNEEKEWVCLVKA---LQPHRIRSVVAGSRNSLAIADDGKLFT 61
Query: 259 WG-------------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
WG + N T + SS+ QAA+G H L + G GG
Sbjct: 62 WGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGG 121
Query: 306 SHHGML-SDPERVSST-RPLSVALEKVSNLDGVKVI-QIAAGAEHSAVVTENRAIMTWG 361
+ +G +PER T RPL +E V+ Q+AAG HS V+T + TWG
Sbjct: 122 NEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 180
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 163/332 (49%), Gaps = 26/332 (7%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V S G + GQLG G EL + L +L+ V +++CG H LA+ G+V
Sbjct: 43 RVLSCGDNSRGQLGRRGAPRGELPEPIQALETLN-VDLVSCGKEHSLAVCH-----KGRV 96
Query: 94 FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GS GQLG GE+ + + PK +T +G + I +S G HS +S +F+ G
Sbjct: 97 FAWGAGSEGQLGIGELKEISFTPKKITTLNGIK--IIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L +G+GS G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAG 211
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QL +S + S +++G L ++ +V IS + +A L+ +G ++T+G G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
T + PQ + SQ G H L G+V+ G S G + PE ++
Sbjct: 272 PTPEKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALTEN 331
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+S L +L GV+V I AG + V T
Sbjct: 332 FDIS-CLISAEDLVGVQVKHIFAGTYANFVTT 362
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 32/290 (11%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G HS + + + +CGD + GQLG P + + NV ++CG HSL
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSL 88
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAAL 250
+ C +V+ +G+G GQLG+ + ++ +S P+ L+ I+I+ +S S AL
Sbjct: 89 AV---CHKGRVFAWGAGSEGQLGIGE--LKEISFTPKKITTLNGIKIIQVSCGHYHSLAL 143
Query: 251 SAEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGE 299
S + +++WG+ NS + + PS S +Q A G H L+ G
Sbjct: 144 SKDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGT 201
Query: 300 VLMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G L+ R V S +PLSV L + V+ I+ GAEH+AV+T++
Sbjct: 202 SFGWGSNSAGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGAEHTAVLTQDGK 256
Query: 357 IMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ T+G GQLG T ++ P++V + D + +V CGS T A
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-----QVDCGSYHTLA 301
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 157/353 (44%), Gaps = 72/353 (20%)
Query: 37 WSWGAGTDGQLGTGRLHDELSP--QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+SWGAG+ G R E SP +LL +S G H L L + SSV
Sbjct: 3 FSWGAGSRG---LQRRRTEGSPGAELLQAAS---------GERHALLLLTNSSV-----H 45
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S G S GQLG P+PV ++ + +S G HS V G +F G G+
Sbjct: 46 SCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL--VSCGKEHSLAVCHKGRVFAWGAGS 103
Query: 155 FGQLGHGDYRS-HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G+++ + +P K+++ + Q++CG HSL L KD +QV+ +G GQL
Sbjct: 104 EGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKD---SQVFSWGKNSHGQL 160
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G+ K+ + S + PQ L I + ++A G S ALS G + WG
Sbjct: 161 GLGKE-LSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWG------------- 206
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
S S Q AL +V +V S +PLS+ L
Sbjct: 207 ----SNSAGQLALSGRNV------------------------QVQSNKPLSIG-----AL 233
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ VI I+ G EH+AV++++ + T+G GQLG T + P++V D
Sbjct: 234 KNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERID 286
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 155/331 (46%), Gaps = 26/331 (7%)
Query: 36 VWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V S G + GQLG G +L + L +L ++++CG H LA+ G+VF
Sbjct: 44 VHSCGENSRGQLGRRGAPRGDLPEPVQALKTLK-FNLVSCGKEHSLAVCH-----KGRVF 97
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GS GQLG GE + + PK +T G + I +S G HS +S +F+ G
Sbjct: 98 AWGAGSEGQLGIGEFKEINFTPKKITTLTGIK--IIQVSCGHYHSLALSKDSQVFSWGKN 155
Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G + S +SP +V S V Q+A G HS L L +G+GS GQ
Sbjct: 156 SHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFAL---SLCGTSFGWGSNSAGQ 212
Query: 213 LGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNS 265
L +S ++ S ++IG L ++ ++ IS + +A LS +G ++T+G G+N
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNP 272
Query: 266 TSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSSTR 321
T PQ + SQ G +H + G+V+ G S + PE +
Sbjct: 273 TPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGHGPSDTSKPTHPEALKENF 332
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ L +L V+V I AG + V T
Sbjct: 333 DIR-CLISADDLVDVQVKHIFAGKYANFVTT 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 21/252 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WGAG++GQLG G + +P+ + + + ++CG H LAL+ S +V
Sbjct: 95 RVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDS-----QV 149
Query: 94 FSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
FSWG+ S GQLG G E+ P+ V +G + ++AG HS +S G F G
Sbjct: 150 FSWGKNSHGQLGLGKELSSQASPQRVRSLEG--IPVAQVAAGGAHSFALSLCGTSFGWGS 207
Query: 153 GTFGQL---GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
+ GQL G + P+ + + N V I+CG H+ VL +D +V+ FG
Sbjct: 208 NSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQD---GKVFTFGDNS 264
Query: 210 RGQLGVSK-DRIRSVSLPQVTIGLHDIEIVGISANGDRSAA-LSAEGHLYTWGRGFNSTS 267
GQLG + + R + + GL + I GD + A + G + ++G G + TS
Sbjct: 265 SGQLGYNPTPKKRGPQIVERIDGL----VSQIDCGGDHTIAYVHTTGQVVSFGHGPSDTS 320
Query: 268 DVNCPQSLPSSL 279
P++L +
Sbjct: 321 KPTHPEALKENF 332
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T GQLG GR +PQ++ S + ++ G AH +AL+ + V
Sbjct: 102 ELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEAHSMALS-----MSRNV 156
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWGR GQLG G + P + D + ++ G +H+ ++ G +FT G G
Sbjct: 157 YSWGRNDCGQLGLGHTNNKDSPSLIEALDNQE--VEFLACGGSHTALLTKDGLVFTFGAG 214
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ +P V+ V K V QIACG RH+L + D LG +V+ FGSG+ GQL
Sbjct: 215 KCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSD-LG-KVFSFGSGEGGQL 272
Query: 214 GVSKDRIRSVSLP 226
G + + LP
Sbjct: 273 GNGATHHQLIPLP 285
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 133/335 (39%), Gaps = 59/335 (17%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
P+ + L + + G H+L L+S GK F + + H L K
Sbjct: 32 KPKCIKLGRKMKIHSMDQGAEHLLVLSS-----DGKPFEYNYS----IEHARFQCVLQEK 82
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSF 175
I I+ G HS +S G LF G T+GQLG G + S +P V
Sbjct: 83 ----------NIIQITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHL 132
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ QI+ G HS+ L + VY +G GQLG+ + P + L +
Sbjct: 133 SGVPLVQISAGEAHSMAL---SMSRNVYSWGRNDCGQLGLGHTNNKDS--PSLIEALDNQ 187
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSL---SFSQAAL 286
E+ ++ G +A L+ +G ++T+G G NST + P L + L +Q A
Sbjct: 188 EVEFLACGGSHTALLTKDGLVFTFGAGKCGQLGHNSTQNELTP-CLVTELVGKRVTQIAC 246
Query: 287 GWNHVLVLTGD-GEVLML----------GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
G H L D G+V G +HH ++ P ++ S L S+
Sbjct: 247 GRRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNEELKFE----SHTSE 302
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
++I IA G N++I+ W E+ + L
Sbjct: 303 KELIMIAGG---------NQSILLWMEKENPYVNL 328
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 53/205 (25%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
KN+ QI CG HSL L K G +++ +G GQLGV + S PQ+ L + +
Sbjct: 82 KNIIQITCGDYHSLALSK---GGELFAWGQNTYGQLGVGRT-FASTPTPQIVEHLSGVPL 137
Query: 238 VGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
V ISA S ALS ++Y+WGR +C Q
Sbjct: 138 VQISAGEAHSMALSMSRNVYSWGRN-------DCGQ------------------------ 166
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
LG H P + + LD +V +A G H+A++T++ +
Sbjct: 167 -----LGLGHTNNKDSPSLIEA-------------LDNQEVEFLACGGSHTALLTKDGLV 208
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVV 382
T+G G+ GQLG +T +++ P +V
Sbjct: 209 FTFGAGKCGQLGHNSTQNELTPCLV 233
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++GAG GQLG +EL+P L+ V+ +ACG H LA S GKVFS
Sbjct: 208 VFTFGAGKCGQLGHNSTQNELTPCLVTELVGKRVTQIACGRRHTLAYVSDL----GKVFS 263
Query: 96 WGRGSSGQLGHGEMVDALYPKPV 118
+G G GQLG+G L P P+
Sbjct: 264 FGSGEGGQLGNGATHHQLIPLPM 286
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
Q G H L L+ GE+ G + +G L +ST + V +L GV ++QI+
Sbjct: 86 QITCGDYHSLALSKGGELFAWGQNTYGQLGVGRTFASTPTPQI----VEHLSGVPLVQIS 141
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
AG HS ++ +R + +WG + GQLGLG+T ++ P ++ D N++ + + CG
Sbjct: 142 AGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALD---NQEVEF-LACGGS 197
Query: 403 FTYAISR 409
T +++
Sbjct: 198 HTALLTK 204
>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 485
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 11/226 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G T GQLG G D +P+++ + LSSV +A G +++L++T G V+S
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEV--LSSVVQIAAGPSYILSVTE-----NGTVYS 289
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G++ LGHGE D L P+P+ F I +SAG H+ + +G ++T G G
Sbjct: 290 FGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYC 349
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LGHGD ++P ++S N+ Q+ R + VL+ VYGFGS G LG
Sbjct: 350 GALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNS---GSVYGFGSMGFGSLGF 406
Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
R+ L P++ L + IS + +++ G ++ +G
Sbjct: 407 LDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFG 452
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 156/363 (42%), Gaps = 28/363 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI--GGKV 93
V+S G+G G LG G + Q + + + S + HV A + ++ + G+V
Sbjct: 131 VYSCGSGLCGVLGQG----SETTQCVAFTRIDSPPLPRV--VHVSASFNHAAFVMQSGEV 184
Query: 94 FSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+ G SS GH + ++ P+ V G ++AG N + F++ G ++TCG
Sbjct: 185 FTCGDNSSSCCGHRDTTRPIFRPRLVESLKG--IPCKQVAAGLNFTVFLTRQGHVYTCGT 242
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
T GQLGHGD + +P + V +V QIA G + L + ++ VY FGSG
Sbjct: 243 NTHGQLGHGDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTEN---GTVYSFGSGANFC 297
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NST 266
LG + P I IV +SA + + AL + G +YTWG+G+
Sbjct: 298 LGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDE 357
Query: 267 SDVNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ P+ SL + L+ Q VL G V G G L +R S + L
Sbjct: 358 IEKTTPELLTSLKNQLAV-QVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVL 416
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ + L V QI+ G H+ V+T I +G E QLG + P +
Sbjct: 417 KPRI--LDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQIF 474
Query: 384 LGD 386
+ D
Sbjct: 475 IKD 477
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 22/254 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++ G + GQLGHG+ D PK + ++ I+AG ++ V+++G +++
Sbjct: 235 GHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS----SVVQIAAGPSYILSVTENGTVYSF 290
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSG 208
G G LGHG+ P + F K +H +++ G H++ L + VY +G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGF---VYTWGKG 347
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNS-- 265
G LG D I + P++ L + V + A ++ L G +Y +G GF S
Sbjct: 348 YCGALG-HGDEIEKTT-PELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLG 405
Query: 266 ------TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+ V P+ L + + SQ + G H +V+T G++ G + L
Sbjct: 406 FLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLR 465
Query: 318 SSTRPLSVALEKVS 331
S P + ++ S
Sbjct: 466 SCLEPTQIFIKDTS 479
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 10/193 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+++ WG GQLG + + SPQ L V+ ++ GG H L+ + G V
Sbjct: 138 QLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLS-----LSGVV 192
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG S+GQLG G+ D P V G + IS G H+ +S G +FT G G
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK--TVSISCGGEHTATLSKGGTVFTFGSG 250
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLGH + P V+ V Q+ CG H+LVL+ L N++Y FG G +GQL
Sbjct: 251 GFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV--ALTNRIYSFGCGMQGQL 308
Query: 214 GVSKDRIRSVSLP 226
G + +SV LP
Sbjct: 309 GNGEQVKQSVPLP 321
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 139/326 (42%), Gaps = 46/326 (14%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSL----SSVSMLACG--GAHVLALTSPSSVIGGKV 93
G DG++ RL DE Q L L + + CG GA +LA GGKV
Sbjct: 48 GFIRDGKVSVLRLRDEDCNQDGKLKQLDLKREKIRSIVCGEDGAVLLA-------DGGKV 100
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ + +P+ D + + I+ G HS +S+ G LF G+
Sbjct: 101 LLMDKYTVC-------------RPLKGLDNTK--VIQIACGDQHSVALSNDGQLFVWGEN 145
Query: 154 TFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG ++ SP + S V QI+ G HS VL L V+G+GS GQ
Sbjct: 146 AHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVL---SLSGVVFGWGSNSAGQ 202
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNST 266
LG+ R V P + L + V IS G+ +A LS G ++T+G G NS
Sbjct: 203 LGLGDTTDRFV--PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL 260
Query: 267 SDVNCPQSLPSSL---SFSQAALGWNHVLVLTG-DGEVLMLGGSHHGMLSDPERVSSTRP 322
D + P+ L + L SQ G +H LVL + G G L + E+V + P
Sbjct: 261 KDEHHPR-LVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHS 348
L V L N + + +I AG +HS
Sbjct: 320 LPVLLPTDCNCE-FTMEKIIAGEKHS 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 41/224 (18%)
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS-----------------LPQVTI-- 230
S++ L+D NQ GK QL + +++IRS+ + + T+
Sbjct: 56 SVLRLRDEDCNQ-----DGKLKQLDLKREKIRSIVCGEDGAVLLADGGKVLLMDKYTVCR 110
Query: 231 ---GLHDIEIVGISANGDRSAALSAEGHLYTWGRGF-------NSTSDVNCPQSLPS--S 278
GL + +++ I+ S ALS +G L+ WG + + PQ L S
Sbjct: 111 PLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCG 170
Query: 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV 338
+ +Q + G NH VL+ G V G + G L + P V +L G K
Sbjct: 171 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIV-----KSLSGKKT 225
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
+ I+ G EH+A +++ + T+G G GQLG + D+ HP++V
Sbjct: 226 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLV 269
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+++G+G GQLG L DE P+L+ S VS + CG H L L + + +++S
Sbjct: 244 VFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVA----LTNRIYS 299
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFD--GHRYTITHISAGWNHS 138
+G G GQLG+GE V P PV +T+ I AG HS
Sbjct: 300 FGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHS 344
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
T+ +S G H+ FV+ + L+ G +GQLG G + + P V + + V ACG
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACG 181
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H+LV + G VY G GQLG+ R+ + Q++ +I +SA +
Sbjct: 182 RNHTLVCTE---GGNVYAAGGNSDGQLGLGDTEERT-TFHQISFFTSRYKIKQLSAGSNT 237
Query: 247 SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
SAAL+ +G LY WG G S S+V P + S + G+ H ++T DGE+
Sbjct: 238 SAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVSCGYYHSALVTTDGEL 297
Query: 301 LMLGGSHHGMLS-DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G +G L E++ + R + V + G KV Q+A G H+ +TE + T
Sbjct: 298 YTFGEPENGKLGLSSEQLKNHRIPQL----VPGISG-KVNQVACGGGHTVALTE-EDVYT 351
Query: 360 WGWGEHGQLGLGNTC--DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+G GE GQLGLG TC + PKVV E + V CG T IS
Sbjct: 352 FGLGEFGQLGLG-TCIFETSVPKVV----EHLRKQKIHYVACGENHTALIS 397
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ G+ GQLG G P + V ACG H L T GG V+
Sbjct: 141 KLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTE-----GGNVY 195
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G S GQLG G+ + ++FF RY I +SAG N S +++ G L+ GD +
Sbjct: 196 AAGGNSDGQLGLGDTEERTTFHQISFFTS-RYKIKQLSAGSNTSAALTEDGELYMWGDNS 254
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + P +V + K V ++CG HS ++ D ++Y FG + G+LG
Sbjct: 255 EGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVTTD---GELYTFGEPENGKLG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTSDVNC-- 271
+S +++++ +PQ+ G+ ++ ++ G + AL+ E +YT+G G F C
Sbjct: 310 LSSEQLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIF 367
Query: 272 PQSLPSSL------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+P + A G NH +++ G + G HG L
Sbjct: 368 ETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKL 413
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G +G+LG + +L + PQL+ S V+ +ACGG H +ALT
Sbjct: 296 ELYTFGEPENGKLGLSSEQLKNHRIPQLVPGIS-GKVNQVACGGGHTVALTEED------ 348
Query: 93 VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK V + I +++ G NH+ +SD+G ++T G
Sbjct: 349 VYTFGLGEFGQLGLGTCIFETSVPKVVEHL--RKQKIHYVACGENHTALISDTGLMYTFG 406
Query: 152 DGTFGQLGHGD--YRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G+ + + P S+F+ +VH +ACG H LV
Sbjct: 407 DGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVF 450
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 58/243 (23%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++ G +DGQLG G + + Q+ +S + L+ G ALT G+++
Sbjct: 194 VYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTE-----DGELY 248
Query: 95 SWGRGSSGQLGHGEMVDALYP------KPVTFF------------DGHRYTITHISAGW- 135
WG S GQ+G + P KPV++ DG YT G
Sbjct: 249 MWGDNSEGQIGLASESNVCVPCRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKL 308
Query: 136 --------NH---------SGFVSDSGC------------LFTCGDGTFGQLGHGDYRSH 166
NH SG V+ C ++T G G FGQLG G
Sbjct: 309 GLSSEQLKNHRIPQLVPGISGKVNQVACGGGHTVALTEEDVYTFGLGEFGQLGLGTCIFE 368
Query: 167 SSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+S KV + K +H +ACG H+ ++ L +Y FG G+ G+LG+ ++ + +
Sbjct: 369 TSVPKVVEHLRKQKIHYVACGENHTALISDTGL---MYTFGDGRHGKLGLGEENFTNQFI 425
Query: 226 PQV 228
P +
Sbjct: 426 PTL 428
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ V+ + L+ G +GQLG G + + P V + + V ACG H+
Sbjct: 50 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LV + G +VY G GQLG+ R+ S ++ +I +SA + SAAL
Sbjct: 110 LVSTE---GGKVYASGGNNEGQLGLGDTDERN-SFHLISFFTSQRKIKQLSAGSNTSAAL 165
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
+ +G L+ WG G + ++V PQ + S + G+ H +T +GE+ G
Sbjct: 166 TEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFG 225
Query: 305 GSHHGMLSDPER--VSSTRPLSVALEKVSNLDGV--KVIQIAAGAEHSAVVTENRAIMTW 360
G L P++ V+ P SV G+ KV+Q+A G H+ V+TE +A+ T+
Sbjct: 226 EPESGKLGLPKQLLVNHRMPQSVP--------GIPEKVVQVACGGGHTVVLTE-KAVYTF 276
Query: 361 GWGEHGQLGLGNTCDQIH-PKVVNLGDEFQNRDTQL-EVFCGSGFTYAIS 408
G G+ GQLGLG + PKV+ +D ++ +FCG T I+
Sbjct: 277 GLGQFGQLGLGTFLFETPVPKVIE-----HIKDLKISSIFCGENHTALIT 321
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 65 KLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 119
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 120 ASGGNNEGQLGLGDTDERNSFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 178
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + ++Y FG + G+LG
Sbjct: 179 EGQIGLKNITNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GELYTFGEPESGKLG 233
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS------ 267
+ K + + +PQ G+ + ++V ++ G + L+ E +YT+G G F
Sbjct: 234 LPKQLLVNHRMPQSVPGIPE-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 291
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ P+ + L S G NH ++T G + G HG L
Sbjct: 292 ETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKL 337
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 49/331 (14%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--------VDALYPKPVTFF 121
+ L+CG H +T K++ +G + GQLG G V AL P+ V F
Sbjct: 48 AFLSCGDEHTAIVTG-----NNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKF- 101
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNV 180
+ G NH+ ++ G ++ G GQLG GD +S +S F + + +
Sbjct: 102 ---------AACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKI 152
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVG 239
Q++ G S L +D +++ +G GQ+G+ I +V +PQ VT+G I
Sbjct: 153 KQLSAGSNTSAALTED---GELFMWGDNSEGQIGLK--NITNVCVPQQVTVGKP---ISW 204
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPS-SLSFSQAALGWNH 290
IS SA ++ EG LYT+G G VN PQS+P Q A G H
Sbjct: 205 ISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKVVQVACGGGH 264
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+VLT + V G G L + T P+ +E + +L K+ I G H+A+
Sbjct: 265 TVVLT-EKAVYTFGLGQFGQLGLGTFLFET-PVPKVIEHIKDL---KISSIFCGENHTAL 319
Query: 351 VTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
+T+ + T+G G HG+LGLG N +Q P
Sbjct: 320 ITDLGLMYTFGDGRHGKLGLGLENFTNQFTP 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G G+LG + L + PQ + V +ACGG H + LT +
Sbjct: 220 ELYTFGEPESGKLGLPKQLLVNHRMPQSV-PGIPEKVVQVACGGGHTVVLTEKA------ 272
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH--RYTITHISAGWNHSGFVSDSGCLFTC 150
V+++G G GQLG G L+ PV H I+ I G NH+ ++D G ++T
Sbjct: 273 VYTFGLGQFGQLGLGTF---LFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTF 329
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
GDG G+LG G ++ + +P S+F+ V +ACG H+LV
Sbjct: 330 GDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVF 374
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 396 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 448
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 449 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 508
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 509 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 563
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 564 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 585
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 586 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 634
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 635 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 666
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 462
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 463 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 522
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 523 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 579
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 580 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 623
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 358
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 359 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 415
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 416 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 473
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 474 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 533
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 534 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 588
Query: 379 PKVVN 383
P+ V
Sbjct: 589 PRQVQ 593
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 303 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 358
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 359 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 418
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 419 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 473
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 474 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 502
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 618 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 676
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G GQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ +H T + E++M+ G + +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G GQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ +H T + E++M+ G + +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G GQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ +H T + E++M+ G + +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 151/353 (42%), Gaps = 34/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
++SWG G +G+LG + D + P+ + +V +ACG H L L +
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA---- 108
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G V+S G GQLG + L + V H I ++ G HS +SD+G +F
Sbjct: 109 -NGSVYSCGANDFGQLGQDRSMRKL--EQVAALSAHE--IRAVACGEAHSLALSDAGQVF 163
Query: 149 TCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G GQLG G + S P + ++ QIACG H L L + +++ +G
Sbjct: 164 SWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANN---GELFSWGG 220
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
GQLG+ +D + LP+ L + + ++ S L+ G ++ WGR
Sbjct: 221 NASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQL 280
Query: 262 GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G + D P L S G NH LT DG V G +G L +V+
Sbjct: 281 GLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNE 340
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG 371
P +V L G + Q++ G H+ A ++ + +G G GQLG G
Sbjct: 341 AVP-----RRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNG 388
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++SWG GQLG GR +E P+ ++ ++++ACG H + LT PS G
Sbjct: 214 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-PS----GT 268
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF WGR S GQLG + D L+P + R I H+ G NH+ ++ G +FT G
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQR--IKHVCCGENHTAALTADGGVFTFGA 326
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GT+GQLGHG + + P +V + + Q++CG H++ ++Y FG G GQ
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQ--SGRLYIFGLGMSGQ 384
Query: 213 LGVSKDRIRSVSLPQVTIGL 232
LG + S +LP GL
Sbjct: 385 LG--NGTLESSALPVTVPGL 402
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 93 VFSWGRGSSGQLGHGEMVDAL-------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++SWG G +G+LG + D + P+ V F G R + ++ G H+ + +G
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRF-GTR-AVREVACGHKHTLVLLANG 110
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+++CG FGQLG RS +V++ + +ACG HSL L QV+ +
Sbjct: 111 SVYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGEAHSLALSD---AGQVFSW 165
Query: 206 GSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-- 260
G + GQLG + R+R P+V L + IV I+ AL+ G L++WG
Sbjct: 166 GCNRNGQLGCGTEEESRLR----PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221
Query: 261 ------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +ST + P+ + + + A G H + LT G V + G + G L
Sbjct: 222 ASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLG 281
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++ P + L ++ + G H+A +T + + T+G G +GQLG G
Sbjct: 282 LSDQRDRLHPTVL-----KPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGV 336
Query: 373 TCDQIHPKVV 382
++ P+ V
Sbjct: 337 KVNEAVPRRV 346
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 29/254 (11%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S P +V F + V ++ACG +H+LVLL + VY G+ GQLG + RS+
Sbjct: 80 SQPERVRRFGTRAVREVACGHKHTLVLLAN---GSVYSCGANDFGQLG----QDRSMRKL 132
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC---------PQSLP- 276
+ L EI ++ S ALS G +++WG N + C P+ +
Sbjct: 133 EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG--CNRNGQLGCGTEEESRLRPKVIKK 190
Query: 277 -SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
++L Q A G H L L +GE+ GG+ G L + L +VS+L G
Sbjct: 191 LATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLP---RRVSHLVG 247
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
V + +A GA HS +T + + WG GQLGL + D++HP V+ R ++
Sbjct: 248 VPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLK-----PLRSQRI 302
Query: 396 E-VFCGSGFTYAIS 408
+ V CG T A++
Sbjct: 303 KHVCCGENHTAALT 316
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 194/439 (44%), Gaps = 97/439 (22%)
Query: 13 KSALINNAKPKIEEEEE--EQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-- 68
+++L N ++ I E + ++Q + SWGA +DG LG ++L P L + SLSS
Sbjct: 544 EASLKNKSEEFIAEYYKNIKEQTGLILSWGANSDGVLGHTGGIEQLWP--LAIESLSSVQ 601
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH--------GEMVDALYPKPVTF 120
V M+A G H L LT G+V S+G GQ G ++ P+P+
Sbjct: 602 VKMVAAGEFHSLCLTE-----NGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVL 656
Query: 121 FDGHR-YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGD------------YRSHS 167
D R T+ I+AG HS V+ G L+T G G QLGH YRS+S
Sbjct: 657 PDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNS 716
Query: 168 S--------PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
+ P ++S+ + V Q+ACG HS + ++ +Y +G G GQLG D
Sbjct: 717 AQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEE---GALYTWGRGANGQLG-HGDM 772
Query: 220 IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT--------WGRGFN------- 264
+ +V G+ D +V ++ + SAA+ + G +YT G+G
Sbjct: 773 TDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHG 832
Query: 265 ---STSDVNCPQSLPSSLS--------FSQAALGWNHVLVLT--------GDGEVLMLGG 305
+ S +C + +P+ LS F A G +T G G L LG
Sbjct: 833 EGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGP 892
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
S G +S+P +SS +DG V+ +A G H+A +T+ + WG E
Sbjct: 893 S--GDVSEPTHLSS-------------IDG--VVSVACGDIHAAALTDKGQLYMWGSSEA 935
Query: 366 GQLGLGNTCDQI--HPKVV 382
G+LG G + + + PK+V
Sbjct: 936 GRLGDGRSTEGVTRTPKLV 954
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 53/327 (16%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH------GEMVDALY------- 114
+V +A GG H +T+ G+++++GRG QLGH GE +AL+
Sbjct: 664 TVVSIAAGGYHSALVTA-----DGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQ 718
Query: 115 -----PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PKP + + ++ G HS V++ G L+T G G GQLGHGD ++P
Sbjct: 719 TSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATP 778
Query: 170 VKVSSFVNKNVH-QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV----- 223
+V + + + ++ACG HS + D G +Y G + GQLG + I +
Sbjct: 779 KRVEAGIKDKIMVKVACGENHSAAV--DSAG-VIYTTGGDESGQLGKGDEWICATHGEGC 835
Query: 224 ---------SLPQV--TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSD 268
+P + + ++ V I+ AA++ G LYTWG+ G + D
Sbjct: 836 TGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGPSGD 895
Query: 269 VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD---PERVSSTRPLSV 325
V+ P L S A G H LT G++ M G S G L D E V+ T L
Sbjct: 896 VSEPTHLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVP 955
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVT 352
A +++ + + ++ G H+ ++
Sbjct: 956 AF---ADIHQARCLGVSIGPRHALAIS 979
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 44/273 (16%)
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
+G + + G + G LGH P+ + S + V +A G HSL L ++ +V
Sbjct: 566 TGLILSWGANSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTEN---GEVT 622
Query: 204 GFGSGKRGQLGVSKDRIR------SVSLPQVTIGLHDIE---IVGISANGDRSAALSAEG 254
FG +GQ G +I +V+ P+ + D+ +V I+A G SA ++A+G
Sbjct: 623 SFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADG 682
Query: 255 HLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
LYT+GRG + LG + V+ L GE GG+ S+
Sbjct: 683 ELYTFGRG-------------------GEFQLGHDTVMAL---GE----GGNALHYRSNS 716
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC 374
+ S +P ++S L+G V Q+A G HSA VTE A+ TWG G +GQLG G+
Sbjct: 717 AQTSYFQPKPT---RLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMT 773
Query: 375 DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
DQ PK V G + + ++V CG + A+
Sbjct: 774 DQATPKRVEAGIKDK---IMVKVACGENHSAAV 803
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 151/353 (42%), Gaps = 34/353 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
++SWG G +G+LG + D + P+ + +V +ACG H L L +
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA---- 102
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G V+S G GQLG + L + V H I ++ G HS +SD+G +F
Sbjct: 103 -NGSVYSCGANDFGQLGQDRSMRKL--EQVAALSAHE--IRAVACGEAHSLALSDAGQVF 157
Query: 149 TCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
+ G GQLG G + S P + ++ QIACG H L L + +++ +G
Sbjct: 158 SWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANN---GELFSWGG 214
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
GQLG+ +D + LP+ L + + ++ S L+ G ++ WGR
Sbjct: 215 NASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQL 274
Query: 262 GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
G + D P L S G NH LT DG V G +G L +V+
Sbjct: 275 GLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNE 334
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLG 371
P +V L G + Q++ G H+ A ++ + +G G GQLG G
Sbjct: 335 AVP-----RRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNG 382
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++SWG GQLG GR +E P+ ++ ++++ACG H + LT PS G
Sbjct: 208 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-PS----GT 262
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF WGR S GQLG + D L+P + R I H+ G NH+ ++ G +FT G
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQR--IKHVCCGENHTAALTADGGVFTFGA 320
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GT+GQLGHG + + P +V + + Q++CG H++ ++Y FG G GQ
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQ--SGRLYIFGLGMSGQ 378
Query: 213 LGVSKDRIRSVSLPQVTIGL 232
LG + S +LP GL
Sbjct: 379 LG--NGTLESSALPVTVPGL 396
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 36/310 (11%)
Query: 93 VFSWGRGSSGQLGHGEMVDAL-------YPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
++SWG G +G+LG + D + P+ V F G R + ++ G H+ + +G
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRF-GTR-AVREVACGHKHTLVLLANG 104
Query: 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+++CG FGQLG RS +V++ + +ACG HSL L QV+ +
Sbjct: 105 SVYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGEAHSLALSD---AGQVFSW 159
Query: 206 GSGKRGQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG-- 260
G + GQLG + R+R P+V L + IV I+ AL+ G L++WG
Sbjct: 160 GCNRNGQLGCGTEEESRLR----PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215
Query: 261 ------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +ST + P+ + + + A G H + LT G V + G + G L
Sbjct: 216 ASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLG 275
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++ P + L ++ + G H+A +T + + T+G G +GQLG G
Sbjct: 276 LSDQRDRLHPTVL-----KPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGV 330
Query: 373 TCDQIHPKVV 382
++ P+ V
Sbjct: 331 KVNEAVPRRV 340
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 29/254 (11%)
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226
S P +V F + V ++ACG +H+LVLL + VY G+ GQLG + RS+
Sbjct: 74 SQPERVRRFGTRAVREVACGHKHTLVLLAN---GSVYSCGANDFGQLG----QDRSMRKL 126
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC---------PQSLP- 276
+ L EI ++ S ALS G +++WG N + C P+ +
Sbjct: 127 EQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG--CNRNGQLGCGTEEESRLRPKVIKK 184
Query: 277 -SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG 335
++L Q A G H L L +GE+ GG+ G L + L +VS+L G
Sbjct: 185 LATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLP---RRVSHLVG 241
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQL 395
V + +A GA HS +T + + WG GQLGL + D++HP V+ R ++
Sbjct: 242 VPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLK-----PLRSQRI 296
Query: 396 E-VFCGSGFTYAIS 408
+ V CG T A++
Sbjct: 297 KHVCCGENHTAALT 310
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 15/249 (6%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T++S G H+ V+ + L+ G +GQLG G + + P V + + V +ACG
Sbjct: 38 TYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV ++ GN VY G GQLG+ R+ P ++ +I +SA + SA
Sbjct: 98 HTLVSTEE--GN-VYATGGNNDGQLGLGDTEGRNTFYP-ISFFTSQHKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL+ G L+ WG G + ++V P + S + G+ H +T DGE+
Sbjct: 154 ALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWISCGYYHSAFVTMDGELYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G +G L PE + + ++ KVIQ+A G H+ V+TE + T+G
Sbjct: 214 FGECENGKLGLPEELLINHKTPQLVTRIPE----KVIQVACGGGHTVVLTET-IVYTFGL 268
Query: 363 GEHGQLGLG 371
G+ GQLGLG
Sbjct: 269 GQFGQLGLG 277
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 156/347 (44%), Gaps = 63/347 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V +ACG H L T G V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEE-----GNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ P++FF ++ I +SAG N S ++++G LF GD +
Sbjct: 110 ATGGNNDGQLGLGDTEGRNTFYPISFFTS-QHKIKQLSAGSNTSAALTENGELFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K + I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVTNVCVPHQVT--IGKPISWISCGYYHSAFVTMD---GELYTFGECENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ ++ + + PQ+ + + +++ ++ G + L+ E +YT+G G
Sbjct: 224 LPEELLINHKTPQLVTRIPE-KVIQVACGGGHTVVLT-ETIVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG + S+P+ A+E + +
Sbjct: 270 -----QFGQLGLG---TFIFE---------------TSEPK----------AIEYIKDH- 295
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
K+ I+ G H+A++TE + T+G G +G+LGLG N +Q P
Sbjct: 296 --KISSISCGENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVP 340
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 20/173 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-----SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
+++++G +G+LG L +EL +PQL+ V +ACGG H + LT
Sbjct: 210 ELYTFGECENGKLG---LPEELLINHKTPQLVTRIP-EKVIQVACGGGHTVVLTETI--- 262
Query: 90 GGKVFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
V+++G G GQLG G + + PK + + H+ I+ IS G NH+ +++ G ++
Sbjct: 263 ---VYTFGLGQFGQLGLGTFIFETSEPKAIEYIKDHK--ISSISCGENHTALITELGRMY 317
Query: 149 TCGDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
T GDG +G+LG G ++ + P F+ + +ACG H ++ LG
Sbjct: 318 TFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMVIFATPRLG 370
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 136/280 (48%), Gaps = 32/280 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++ WG LG G D L PQ +NL ++ VS G H A+ V GG VF
Sbjct: 55 RMYCWGL-----LGLGETLDVLYPQKVNLEGVTCVS---AGHRHAAAI-----VGGGDVF 101
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WGRG SGQLG G P+P++F + +S G +HS F+++ G L+ G G
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSF----PMPVKALSCGGSHSLFITEDGRLYATGRGK 157
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G S SPV+V V CG S++ + QV+ FGS GQL
Sbjct: 158 EGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATES---GQVFTFGSDDYGQL 214
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STS 267
G+ + +++ +V + L + I+A +AA++++G LYTWG G + +T
Sbjct: 215 GLGQFARYAMTPKEVAV-LAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTV 273
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDG--EVLML 303
DV+ P + +L A G +H + + G E LML
Sbjct: 274 DVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLML 313
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS-SVSMLACGGAHVLALTSPSSVIGGKV 93
++++ G G +GQLGTG LSP + + S V CG + T G+V
Sbjct: 149 RLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATES-----GQV 203
Query: 94 FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F++G GQLG G+ A+ PK V G + I+AG H+ V+ G L+T G
Sbjct: 204 FTFGSDDYGQLGLGQFARYAMTPKEVAVLAGK--NVRSIAAGDYHAAAVTSDGKLYTWGY 261
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ----------- 201
G GQLG+G+ S PV V N V +ACG H++ ++ L Q
Sbjct: 262 GRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLES 321
Query: 202 --VYGFGSGKRGQLG 214
V+ G G+ GQLG
Sbjct: 322 GEVFVMGRGREGQLG 336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 116/270 (42%), Gaps = 27/270 (10%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G LG G+ P KV+ + V ++ G RH+ ++ G V+ +G G GQLG
Sbjct: 59 WGLLGLGETLDVLYPQKVNL---EGVTCVSAGHRHAAAIVG---GGDVFVWGRGFSGQLG 112
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ ++ P + + +S G S ++ +G LY GRG +S
Sbjct: 113 LGTNKSHFTPQPLS----FPMPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQES 168
Query: 275 LPSSLSFSQ---------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ S + A G + ++ T G+V G +G L + ++
Sbjct: 169 VLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLG----LGQFARYAM 224
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
++V+ L G V IAAG H+A VT + + TWG+G GQLG GNT D P +V
Sbjct: 225 TPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVR-- 282
Query: 386 DEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
E QN Q V CG T A+ L Q
Sbjct: 283 -ELQNLRVQ-SVACGCDHTVAVIDRGLKEQ 310
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 35 KVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+++G+ GQLG G+ ++P+ + + + +V +A G H A+TS GK+
Sbjct: 202 QVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSD-----GKL 256
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD---------- 143
++WG G SGQLG+G VD P V R + ++ G +H+ V D
Sbjct: 257 YTWGYGRSGQLGNGNTVDVSLPVLVRELQNLR--VQSVACGCDHTVAVIDRGLKEQLMLI 314
Query: 144 ------SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SG +F G G GQLG GD SP S V V Q+ACG H+L
Sbjct: 315 SSQVLESGEVFVMGRGREGQLGRGDI--VESPAVYRS-VPLQVQQVACGTSHTL 365
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 20 AKPKIEEEEEEQQVVK----VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG 75
A P+I V+K VW+WG GQLG G + + + L V +A G
Sbjct: 37 AVPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPR--KFAIQVKGLEDVVSIAAG 94
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
H LA+ S G V++WG GQLG G + P V +T I AG+
Sbjct: 95 WEHNLAVKSD-----GTVWAWGNNRFGQLGDGTNENRNTPVKVKTIK----DVTEIDAGF 145
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
HS + G ++ G+ QLG G P++V NV ++ G H+LVL
Sbjct: 146 YHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGL--NNVVAVSGGNHHNLVLKA 203
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE-IVGISANGDRSAALSAEG 254
D ++G+G+ GQLG S+ P ++D V I++ + + A+ A+G
Sbjct: 204 D---GTIWGWGANGYGQLGDGTMTESSIPTP-----VYDFNGAVFIASGNNYNVAVKADG 255
Query: 255 HLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
++ WG G + ++ P + + A G H L+L DG VL +G +
Sbjct: 256 SIWGWGMNTYGQLGNGTQTNSKIPIRINGLNNSVSIATGGYHALILQQDGTVLSMGYNRT 315
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L +T KV L V+ IAAG HS + ++ I WG E+GQL
Sbjct: 316 GQLG----TGATSNYQYTTLKVHGLS--DVVSIAAGYYHSLALKKDGTIWAWGNNEYGQL 369
Query: 369 GLG 371
G G
Sbjct: 370 GDG 372
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 156/319 (48%), Gaps = 33/319 (10%)
Query: 64 SSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDG 123
S ++V ++ GG+H L L G V++WG +GQLG G + V +
Sbjct: 33 SLFAAVPQISGGGSHSLVLKPD-----GTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLE- 86
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ I+AGW H+ V G ++ G+ FGQLG G + ++PVKV + K+V +I
Sbjct: 87 ---DVVSIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTI--KDVTEI 141
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISA 242
G HS+ L D V+ +G+ + QLG D +S + P GL++ +V +S
Sbjct: 142 DAGFYHSIALQSD---GTVWVWGNNELDQLG---DGTKSDAYKPMQVQGLNN--VVAVSG 193
Query: 243 NGDRSAALSAEGHLYTWG-RGFNSTSDVNCPQ-SLPSSL-SFSQA---ALGWNHVLVLTG 296
+ L A+G ++ WG G+ D + S+P+ + F+ A A G N+ + +
Sbjct: 194 GNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNVAVKA 253
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
DG + G + +G L + + +S P+ +++ L+ + IA G H+ ++ ++
Sbjct: 254 DGSIWGWGMNTYGQLGNGTQTNSKIPI-----RINGLN--NSVSIATGGYHALILQQDGT 306
Query: 357 IMTWGWGEHGQLGLGNTCD 375
+++ G+ GQLG G T +
Sbjct: 307 VLSMGYNRTGQLGTGATSN 325
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 22/262 (8%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ IS G +HS + G ++ G GQLG G ++V ++V IA G
Sbjct: 38 VPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGL--EDVVSIAAGW 95
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+L + D V+ +G+ + GQLG + R+ + TI ++ I A S
Sbjct: 96 EHNLAVKSD---GTVWAWGNNRFGQLGDGTNENRNTPVKVKTIK----DVTEIDAGFYHS 148
Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
AL ++G ++ WG G + SD P + + + G +H LVL DG +
Sbjct: 149 IALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADGTIW 208
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + +G L D S+ P V D + IA+G ++ V + +I WG
Sbjct: 209 GWGANGYGQLGDGTMTESSIPTPV-------YDFNGAVFIASGNNYNVAVKADGSIWGWG 261
Query: 362 WGEHGQLGLGNTCDQIHPKVVN 383
+GQLG G + P +N
Sbjct: 262 MNTYGQLGNGTQTNSKIPIRIN 283
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V QI+ G HSLVL D V+ +G GQLG R ++ QV GL D+ V
Sbjct: 38 VPQISGGGSHSLVLKPD---GTVWAWGGNHAGQLGDGTTNPRKFAI-QVK-GLEDV--VS 90
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
I+A + + A+ ++G ++ WG G + + N P + + ++ G+ H +
Sbjct: 91 IAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKDVTEIDAGFYHSIA 150
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
L DG V + G + L D + + +P+ V + ++N V+ ++ G H+ V+
Sbjct: 151 LQSDGTVWVWGNNELDQLGDGTKSDAYKPMQV--QGLNN-----VVAVSGGNHHNLVLKA 203
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ I WG +GQLG G + P V D VF SG Y ++
Sbjct: 204 DGTIWGWGANGYGQLGDGTMTESSIPTPV--------YDFNGAVFIASGNNYNVA 250
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+W WG T GQLG G + P + ++ L++ +A GG H L L G V S
Sbjct: 257 IWGWGMNTYGQLGNGTQTNSKIP--IRINGLNNSVSIATGGYHALILQQD-----GTVLS 309
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT-ITHISAGWNHSGFVSDSGCLFTCGDGT 154
G +GQLG G + Y T H + + I+AG+ HS + G ++ G+
Sbjct: 310 MGYNRTGQLGTGATSNYQY----TTLKVHGLSDVVSIAAGYYHSLALKKDGTIWAWGNNE 365
Query: 155 FGQLGHGDYRSHSSPV 170
+GQLG G P+
Sbjct: 366 YGQLGDGTLNYKKLPI 381
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 65/385 (16%)
Query: 34 VKVWSWGAGTDGQLG---------TGRLHDELS---PQLLNLSSLS--SVSMLACGGAHV 79
V +++WG GQLG T R E + P ++SSL V+ +A G H
Sbjct: 161 VALYAWGRCDAGQLGFGAGGFGAPTSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHS 220
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--------LYPKPVTFFDGHRYTITHI 131
+A+TS G+V+++G S G G+ + A + P VT + +
Sbjct: 221 VAVTS-----AGEVYAFGDCS----GEGKALSAPTRLREAVIDPPEVTATTNAMPRVATV 271
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH---------- 181
+ G H V+ SG L + G+ FGQLG G R SS S + +
Sbjct: 272 ACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGS 331
Query: 182 ------QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ACG H+L L + +V+ FG G G LG DR+ + +P++ L +
Sbjct: 332 GHVKFTSVACGAGHTLALTAN---GRVFSFGRGAFGALG-HGDRL-NCDVPRLVDALWGV 386
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG---------FNSTSDVNCPQSLPSS-LSFSQAA 285
+ I+A + SA+LSA G +YTWGRG ++ S Q+L + + Q A
Sbjct: 387 GVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIA 446
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVALEKVSNLDGVKVIQIAAG 344
G +H L + G G ++L S P +T L+ + + L KV QI+AG
Sbjct: 447 CGGDHTLAIAGGGSGVLLAWGRGS--SGPAGTGATADVLTPTIIDRALLGDEKVFQISAG 504
Query: 345 AEHSAVVTENRAIMTWGWGEHGQLG 369
++HS VTE + TWG GQLG
Sbjct: 505 SKHSVAVTEGGCVYTWGARTQGQLG 529
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 69/349 (19%)
Query: 93 VFSWGRGSSGQL-------------GHGEMVDALYPKP--VTFFDGHRYTITHISAGWNH 137
+++WGR +GQL E +A YP P V+ DG +TH++ G H
Sbjct: 163 LYAWGRCDAGQLGFGAGGFGAPTSRDSSEAAEA-YPTPRSVSSLDGR--DVTHVAGGARH 219
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV------------NKNVHQIAC 185
S V+ +G ++ GD + G+ ++ S+P ++ V V +AC
Sbjct: 220 SVAVTSAGEVYAFGDCS------GEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVAC 273
Query: 186 GMRH------SLVLLKDCLGNQVYG-FGSG---KRGQLGVSKDRIR---SVSLPQVTIGL 232
G RH S VLL GN+ +G G G G +K IR S+ +G
Sbjct: 274 GQRHCAAVTTSGVLLS--WGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGS 331
Query: 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG----FNSTSDVNC--PQSLPS--SLSFSQA 284
++ ++ + AL+A G ++++GRG +NC P+ + + + +Q
Sbjct: 332 GHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQI 391
Query: 285 ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV-ALEKVSNLDGVKVIQIAA 343
A G NH L+ G V G +G L + + +RP V AL+ GV+ QIA
Sbjct: 392 AAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDA----GVRCEQIAC 447
Query: 344 GAEHSAVVTE--NRAIMTWGWGEHGQLGLGNTCDQIHPKVVN---LGDE 387
G +H+ + + ++ WG G G G G T D + P +++ LGDE
Sbjct: 448 GGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDE 496
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 122/273 (44%), Gaps = 40/273 (14%)
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG--SGKRGQLGVSKDRIRS 222
++ +P VSS ++V +A G RHS+ + +VY FG SG+ G+ + R+R
Sbjct: 195 AYPTPRSVSSLDGRDVTHVAGGARHSVAVTS---AGEVYAFGDCSGE-GKALSAPTRLRE 250
Query: 223 --VSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWG------------RGFNSTS 267
+ P+VT + + V A G R AA++ G L +WG R +S
Sbjct: 251 AVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKG 310
Query: 268 DVNC-----------PQSLPSS-LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
D P+ + S + F+ A G H L LT +G V G G L +
Sbjct: 311 DAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGD 370
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
R++ P V L GV V QIAAG HSA ++ + + TWG G++G LG + +
Sbjct: 371 RLNCDVP-----RLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDN 425
Query: 376 QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ P V D+ R Q + CG T AI+
Sbjct: 426 RSRPTPVQALDDAGVRCEQ--IACGGDHTLAIA 456
>gi|115528070|gb|AAI24692.1| Sergef protein [Danio rerio]
Length = 423
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 181/408 (44%), Gaps = 46/408 (11%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLA 81
+E ++ + V +++WGA + GQLG G D+ P+ + S L + A GG H A
Sbjct: 27 MEGDQLSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRVE-SGLQEEQIRAVTGGGGHS-A 84
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK--PVTFFDGHRYTITHISAGWNHSG 139
L S S G++ G+ GQLG G ++ + + P+ F + +S GW+ +
Sbjct: 85 LISDS----GELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFG----RVQQVSCGWDFTI 136
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++ G + CG FGQLG ++HS+ P+ + SF ++ V +A G+RH+L
Sbjct: 137 ILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSF-HEPVTSVAAGLRHALA---STA 192
Query: 199 GNQVYGFGSG-----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
VY +G+G KR S P + G + + A A L+
Sbjct: 193 SGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVN 252
Query: 254 GHLYTWGRG-----FNSTSDVNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLG 304
G L+ WG + + + P +L S+ S GW H++ T G V G
Sbjct: 253 GELFLWGSNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWG 312
Query: 305 GSHHGMLSDP----ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
S++G L E+ S L + +V L G QI+ G+EH+ V R + +W
Sbjct: 313 RSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGAT--QISCGSEHNLAVVGGR-VFSW 369
Query: 361 GWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GW EHG G G+ D P+ + L D L + CG+G + A+
Sbjct: 370 GWNEHGMCGDGSLQDITQPQPIPALADA-----VALLIGCGAGHSMAL 412
>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
stuttgartiensis]
Length = 1590
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 107/405 (26%), Positives = 165/405 (40%), Gaps = 78/405 (19%)
Query: 62 NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF 121
N ++ +A G H LAL S G V++WG GQLG + P V+
Sbjct: 557 NFMLITVTPKIAAGARHSLALKS-----NGTVWAWGNNGDGQLGDETTKNRTIPAQVSNV 611
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
+ IT I G +HS + G ++ G GQLG G ++PV++S ++
Sbjct: 612 NA----ITTIDGGASHSLALKSDGTVWVWGANWDGQLGDGTNTRKTTPVQISGL--SDII 665
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
IACGM HS+ L D V+ FG GQLG + R+ P GL D+ + I+
Sbjct: 666 SIACGMYHSIALKSD---GTVWAFGRNDYGQLGDGTNVYRNK--PVQVSGLSDV--IAIA 718
Query: 242 ANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLT 295
AL ++G ++ WG G +T++ N P + S + + A GW H L L
Sbjct: 719 GGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNRNTPVQVSSISNVAAIARGWVHSLALK 778
Query: 296 GDGEVLMLGGSHHGMLSDPERVSSTRPL-----------------SVAL----------- 327
D V G + G L D + T P+ ++AL
Sbjct: 779 SDETVWAWGSNGSGQLGDGTTTNRTTPVNITNINNIIAIAGGGGYTIALKSDGTGWTCGE 838
Query: 328 ----------------------EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
++V+ ++ V+ +A G +H V+ ++ + TWG +
Sbjct: 839 YGWDYSENNGSSYWGYSYRTTPDQVAGIN--DVVAVAGGWQHIVVLKQDGTVWTWGVNWY 896
Query: 366 GQLGLGNTCDQIHPKVV--NLGDEFQNRDTQLEVFCGSGFTYAIS 408
GQLG G T D+ P V NLG+ + + SG +Y S
Sbjct: 897 GQLGDGTTTDRDTPVQVDINLGEMPDTFPPEGSISINSGVSYTNS 941
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 162/353 (45%), Gaps = 36/353 (10%)
Query: 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT 127
+V +ACG H + +T+ G+ FS+G GQLGHG + P+ V R
Sbjct: 43 AVISVACGDQHSVFITAS-----GRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAI 97
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-HGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ ++ G +H+ +D ++ G + QLG H+ P V++ V + G
Sbjct: 98 L--VACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAG 155
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HSL L + VY +GS + GQLG+ + + R + + T G + + ISA
Sbjct: 156 ADHSLALSAKGI---VYLWGSSEHGQLGLGRKKQRKLPVQLKTEG----KAIAISAGAYH 208
Query: 247 SAALSAEGHLYTWGR------GFN-STSDVNCPQSLPSSLSF-SQAALGWNHVLVLTGDG 298
SA ++ +G LYT+G G N + P +P + A G +H + LT DG
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDG 268
Query: 299 EVLMLGGSHHGMLSDPERVS-STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G G L +RV+ + RP + + GVK+ +++AG H+A ++E R +
Sbjct: 269 RAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPT-----GVKMARVSAGQSHTAFLSEGRQM 323
Query: 358 MTWGWGEHGQLGLGN---TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
T G G HG+L L + ++ P +V++ FQ + +V CG T +
Sbjct: 324 YTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQ----QVSCGGCHTLVL 372
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 27/287 (9%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G VF++G+ + D L P TF+ + I+ ++ G HS F++ SG F+
Sbjct: 19 GAVFTFGKS--------KFSDNL---PGTFWVKNDAVIS-VACGDQHSVFITASGRTFSF 66
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLGHG ++ +P V + +K +ACG H+LV D +VY FG
Sbjct: 67 GSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDD---KKVYAFGINSE 123
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QLGV K + PQ+ L+ +++ ++A D S ALSA+G +Y WG G
Sbjct: 124 HQLGV-KSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLG 182
Query: 265 STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
P L + + G H + DG + G + HG L R S
Sbjct: 183 RKKQRKLPVQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPS 242
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
KV ++ G+ V +A G H+ +T + ++G G GQLGLG
Sbjct: 243 ----KVPDIQGL-VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLG 284
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 25/180 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS-----VSMLACGGAHVLALTSPSSVIG 90
++++G G+LGT L+P+ S V+ +ACGG+H +ALT
Sbjct: 218 LYTFGETEHGKLGT-----NLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCD----- 267
Query: 91 GKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+ +S+G GS GQLG G+ V A P + G + + +SAG +H+ F+S+ ++T
Sbjct: 268 GRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVK--MARVSAGQSHTAFLSEGRQMYT 325
Query: 150 CGDGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLVL----LKDCLGNQV 202
CG+G G+L D S SP+ V V Q++CG H+LVL L D GN++
Sbjct: 326 CGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRM 385
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 180/409 (44%), Gaps = 67/409 (16%)
Query: 40 GAGTDGQLGTG---RLHDELSPQLLN-------LSSLSSVSMLACGGAHVLALTSPSSVI 89
G G G+LG G HD SP+ N +S L V +A GGAH + L V
Sbjct: 31 GNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLD-VRAVAAGGAHSVFL-----VA 84
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHISAGWNHSGFVSDSGCLF 148
GG VF+ G + GQLGH + P+P+ D + ++AG H+ V GC++
Sbjct: 85 GGHVFTCGLNADGQLGHSAGL-PFSPEPMLVRLD---VEVVSVAAGNGHTLCVDVDGCVW 140
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G T GQLG G+ + P K+ + + V Q+ACG HSL + D +VY +GS
Sbjct: 141 AFGKNTAGQLGTGNVDG-TIPRKIGALAKEARVAQVACGAEHSLAVADD---GRVYSWGS 196
Query: 208 GKRGQLGVSKD---------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
G LG + R+ P++ L D ++V ++A SA + G+LYT
Sbjct: 197 STDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGNLYT 256
Query: 259 WGRG-FN------STSDVNCPQSLPSSLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
WG+G FN SD S SL F + A G H L T G V+ G + HG
Sbjct: 257 WGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAG-VVSWGANQHGE 315
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------- 363
L + A+ K + ++AAG +HSA + N + WG+G
Sbjct: 316 LGHGHHSD----IKSAVPKPIKMGSRGWSKLAAGWKHSAGIA-NGKLFAWGFGGSMGSYA 370
Query: 364 -----EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GQLGLGN D P V++ E + +V CG T A+
Sbjct: 371 DEKMSSGGQLGLGNEFDFWEPHEVSVPGEVK------DVSCGFNHTLAL 413
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 34/243 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
VW++G T GQLGTG + + ++ L+ + V+ +ACG H LA+ G+V+S
Sbjct: 139 VWAFGKNTAGQLGTGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADD-----GRVYS 193
Query: 96 WGRGSSGQLGHGEMV-----------DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
WG + G LGHG L P+ V + + + ++AG HS + D
Sbjct: 194 WGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKK--VVAVAAGHMHSACIDDR 251
Query: 145 GCLFTCGDGTFGQLG----HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGN 200
G L+T G G F QLG D+ + SPV F VH+IACG HSL
Sbjct: 252 GNLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRF----VHEIACGGLHSLANTN----A 303
Query: 201 QVYGFGSGKRGQLGVS-KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
V +G+ + G+LG I+S + +G + A G + +A A G L+ W
Sbjct: 304 GVVSWGANQHGELGHGHHSDIKSAVPKPIKMGSRGWSKL---AAGWKHSAGIANGKLFAW 360
Query: 260 GRG 262
G G
Sbjct: 361 GFG 363
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 29/246 (11%)
Query: 148 FTCGDGTFGQLGHGDY---------RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
+ G+G G+LGHG RS + V + +V +A G HS+ L+
Sbjct: 28 LSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVA--- 84
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
G V+ G GQLG S S P+ + D+E+V ++A + + +G ++
Sbjct: 85 GGHVFTCGLNADGQLGHSAGLPFS---PEPMLVRLDVEVVSVAAGNGHTLCVDVDGCVWA 141
Query: 259 WGR---GFNSTSDVN--CPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
+G+ G T +V+ P+ +L +Q A G H L + DG V G S G+
Sbjct: 142 FGKNTAGQLGTGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSSTDGV 201
Query: 311 LSDPERV------SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
L T +A V +L+ KV+ +AAG HSA + + + TWG G
Sbjct: 202 LGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGR 261
Query: 365 HGQLGL 370
QLGL
Sbjct: 262 FNQLGL 267
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 90/237 (37%), Gaps = 89/237 (37%)
Query: 35 KVWSWGAGTDGQLGTGR-----------LHDELSPQLLN--------------------- 62
+V+SWG+ TDG LG G EL+P+L+
Sbjct: 190 RVYSWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACID 249
Query: 63 -------------------------------LSSLSSVSMLACGGAHVLALTSPSSVIGG 91
+ SL V +ACGG H LA T+
Sbjct: 250 DRGNLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAG----- 304
Query: 92 KVFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
V SWG G+LGHG D + PKP+ G R + ++AGW HS +++ G LF
Sbjct: 305 -VVSWGANQHGELGHGHHSDIKSAVPKPIKM--GSR-GWSKLAAGWKHSAGIAN-GKLFA 359
Query: 150 CGDG------------TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
G G + GQLG G+ P +VS V V ++CG H+L L+
Sbjct: 360 WGFGGSMGSYADEKMSSGGQLGLGNEFDFWEPHEVS--VPGEVKDVSCGFNHTLALV 414
>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
Length = 1074
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 146/319 (45%), Gaps = 23/319 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL-------SPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
++ G+ + GQLG G +L +P L++ V + CG ++ S+
Sbjct: 137 LYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVDKLRDYKVESVECGSNFTFSIVKDSNN 196
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
+F+WG GQLG + + +P + FF+ + I ISAG +HS F+++ ++
Sbjct: 197 QEQSIFAWGCNREGQLGLSSLAEIDFPTKLKFFEDYNIRIKQISAGSSHSLFLTEESQVY 256
Query: 149 TCGDGTFGQLGHGDYRSHS-SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
G + GQLG G + + P+ + + V+K + QI+ G HSL L +VY G+
Sbjct: 257 AVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQISAGDHHSLFLTS---TGEVYCCGN 313
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNST 266
+ QLG+ + + ++T L + +IV I A + SAA+S G L+ WG+G F S
Sbjct: 314 NQLNQLGIMDAQTNQYTPLKIT-ALQNYKIVKIEAKQE-SAAISNAGELFLWGKGVFGS- 370
Query: 267 SDVNCPQS-LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
PQ L S +LG + L G + G + HG L ++ P V
Sbjct: 371 --YRTPQKILTISNPVCDISLGRSLGTALDSKGLLWTWGTNEHGELGVGDQDPRIHPYPV 428
Query: 326 ALEKVSNLDGVKVIQIAAG 344
L G KV QI G
Sbjct: 429 L-----TLKGKKVTQIMCG 442
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 170/417 (40%), Gaps = 64/417 (15%)
Query: 23 KIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELS-----------PQLLNLSSLSSVSM 71
+I+ E + + +V+ WG GQLG H +L P+ + + L +
Sbjct: 65 QIKNEPQFYEFTEVFVWGDDRWGQLGL--YHQKLKKGNCDQVFFKVPKTCSFNIL--IKQ 120
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK-----PVTFFDGHRY 126
++CG H LT+ G ++ G S GQLG G+ L K P Y
Sbjct: 121 ISCGDNHSAILTNQ-----GHLYMMGSNSQGQLGIGDNCPDLQNKDCAGAPCLVDKLRDY 175
Query: 127 TITHISAGWNHS-GFVSDSG----CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH 181
+ + G N + V DS +F G GQLG P K+ F + N+
Sbjct: 176 KVESVECGSNFTFSIVKDSNNQEQSIFAWGCNREGQLGLSSLAEIDFPTKLKFFEDYNIR 235
Query: 182 --QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
QI+ G HSL L ++ QVY GS GQLG+ + +I P + L D I+
Sbjct: 236 IKQISAGSSHSLFLTEES---QVYAVGSNSSGQLGIGQ-QINQAIQPIIIDTLVDKVIIQ 291
Query: 240 ISANGDRSAALSAEGHLYTWGRG-------FNSTSDVNCPQSLPSSLSFSQAAL-GWNHV 291
ISA S L++ G +Y G ++ ++ P + + ++ +
Sbjct: 292 ISAGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNYKIVKIEAKQES 351
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
++ GE+ + G G P+++ + +SN V I+ G +
Sbjct: 352 AAISNAGELFLWGKGVFGSYRTPQKILT----------ISN----PVCDISLGRSLGTAL 397
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ TWG EHG+LG+G+ +IHP V+ L + + TQ + CG F A+
Sbjct: 398 DSKGLLWTWGTNEHGELGVGDQDPRIHPYPVLTLKGK---KVTQ--IMCGGKFVVAL 449
>gi|414883648|tpg|DAA59662.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1078
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 42/345 (12%)
Query: 33 VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V+SWG+GT+ QLGTG H + P + S + +A H +A++S G+
Sbjct: 151 ATEVFSWGSGTNYQLGTGNAHIQKLPCKVEALHGSYIKTVAASKFHSVAVSS-----NGE 205
Query: 93 VFSWGRGSSGQLGH-----GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
+++WG G G+LGH G+ + P+ VT G R + ++A +H+ ++ G L
Sbjct: 206 LYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLG-RKRVNAVAAAKHHTVIATELGEL 264
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G GQLG+ + +P +V S + + +A +HS + +V+ +G
Sbjct: 265 FTWGSNREGQLGYPSVDTQPTPRRVGSL-KQRIISVAAANKHSAAVADT---GEVFTWGC 320
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
K GQLG S +P++ L + G+SA + L A+G ++TWG +
Sbjct: 321 NKEGQLGYGTSNSASNCIPRMVEYLKGKVLRGVSAAKYHTIVLGADGEVFTWGHRLVTPR 380
Query: 268 DVNCPQSLP----SSLSFSQ--------AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
V + L ++L F + A G H LT DG + + + SDP+
Sbjct: 381 RVVVARCLKKGGNTNLKFHRMERLQVISVAAGTTHNTALTADGALF------YWVSSDPD 434
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+ +++ ++ G ++ I+AG +AV T + W
Sbjct: 435 ---------LKCQQIFSMCGRNIVNISAGKYWTAVATSTGDVFMW 470
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
V I+C + + D + +V+ +GSG QLG I+ LP LH I
Sbjct: 132 VDLISCPVSQANGDFPDAVATEVFSWGSGTNYQLGTGNAHIQK--LPCKVEALHGSYIKT 189
Query: 240 ISANGDRSAALSAEGHLYTWGRGFN-----------STSDVNCPQSLPSSL---SFSQAA 285
++A+ S A+S+ G LYTWG G T+ V P+ + L + A
Sbjct: 190 VAASKFHSVAVSSNGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGLGRKRVNAVA 249
Query: 286 LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
+H ++ T GE+ G + G L P + P V K ++I +AA
Sbjct: 250 AAKHHTVIATELGELFTWGSNREGQLGYPSVDTQPTPRRVGSLKQ------RIISVAAAN 303
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHPKVV 382
+HSA V + + TWG + GQLG G N+ P++V
Sbjct: 304 KHSAAVADTGEVFTWGCNKEGQLGYGTSNSASNCIPRMV 342
>gi|332835959|ref|XP_003312986.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Pan troglodytes]
gi|410207628|gb|JAA01033.1| secretion regulating guanine nucleotide exchange factor [Pan
troglodytes]
gi|410251648|gb|JAA13791.1| secretion regulating guanine nucleotide exchange factor [Pan
troglodytes]
gi|410291376|gb|JAA24288.1| secretion regulating guanine nucleotide exchange factor [Pan
troglodytes]
gi|410352341|gb|JAA42774.1| secretion regulating guanine nucleotide exchange factor [Pan
troglodytes]
Length = 458
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 135/288 (46%), Gaps = 31/288 (10%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DGTFG 156
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH + + +P K S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 -LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVP 136
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I H ++V I+A + A +A G ++ WG G CP Q+L
Sbjct: 137 HGPRRCV-VPQA-IEFHKEKVVCIAAGLRHALAATASGIVFQWGTGLAPCGRRLCPGQTL 194
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L++ ++
Sbjct: 195 PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFL 251
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E KV I +G H TE + TWG ++GQLG
Sbjct: 252 PVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 166/397 (41%), Gaps = 49/397 (12%)
Query: 43 TDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
+ GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGLNKD 78
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-- 159
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQLG
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-----GKRGQLG 214
HG R + F + V IA G+RH+L + V+ +G+ G+R G
Sbjct: 137 HGPRRCVVP--QAIEFHKEKVVCIAAGLRHALAATASGI---VFQWGTGLAPCGRRLCPG 191
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDV 269
+ + P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL 251
Query: 270 NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML-------------S 312
PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 311
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ +RP + L G +++ G+EH+ + +WGW EHG G G
Sbjct: 312 QDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGT 368
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 369 EANVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T +S G H+ V+ + L+ G +GQLG G + S P V + + V ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV + G +VY G GQLG+ RS + ++ +I +SA + SA
Sbjct: 98 HTLVSTE---GGKVYAAGGNNEGQLGLGDTEERS-TFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL+ +G L+ WG G + ++V PQ + S + G+ H +T +G++
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L P ++ + + V + G KV+Q+A G H+ V+TE +A+ T+G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMP---QPVPGIPG-KVVQVACGGGHTVVLTE-KAVYTFGL 268
Query: 363 GEHGQLGLG 371
G+ GQLGLG
Sbjct: 269 GQFGQLGLG 277
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + Q+Y FG + G+LG
Sbjct: 169 EGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GQLYTFGEPECGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS------ 267
+ + + +PQ G+ ++V ++ G + L+ E +YT+G G F
Sbjct: 224 LPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 281
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ + P+++ S A G NH ++T G + G HG L
Sbjct: 282 ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKL 327
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 153/333 (45%), Gaps = 49/333 (14%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE--------MVDALYPKPVTFF 121
+ L+CG H +T K++ +G + GQLG G V AL P+ V F
Sbjct: 38 TFLSCGDEHTAVVTG-----NNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF- 91
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNV 180
+ G NH+ ++ G ++ G GQLG GD S+ +S F + + +
Sbjct: 92 ---------AACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKI 142
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVG 239
Q++ G S L +D +++ +G GQ+G+ + + +V +PQ VT+G I
Sbjct: 143 KQLSAGSNTSAALTED---GELFMWGDNSEGQIGL--ENVTNVCVPQQVTVGK---PISW 194
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSL-SFSQAALGWNH 290
IS SA ++ EG LYT+G G + VN PQ +P Q A G H
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+VLT + V G G L + T + A+E + + K+ IA G H+A+
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQ---KISFIACGENHTAL 309
Query: 351 VTENRAIMTWGWGEHGQLGLG--NTCDQIHPKV 381
+T+ + T+G G HG+LGLG N+ +Q P +
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYT 127
V +ACGG H + LT + V+++G G GQLG G + + PK + +
Sbjct: 245 VVQVACGGGHTVVLTEKA------VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK-- 296
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIAC 185
I+ I+ G NH+ ++D G ++T GDG G+LG G S + P S+F+ V ++C
Sbjct: 297 ISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSC 356
Query: 186 GMRHSLVLLKDCLG 199
G H+LV LG
Sbjct: 357 GGCHTLVFATPRLG 370
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 240 ISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALGWN 289
+S + +A ++ LY WG+ G S S V+ P + P + F AA G N
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF--AACGRN 97
Query: 290 HVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H LV T G+V GG++ G L D E S+ +S + K+ Q++AG+
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR------KIKQLSAGSNT 151
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
SA +TE+ + WG GQ+GL N + P+ V +G
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK 190
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+F WG G+LG G E PK + +F+ ++ + G NH+ F++ G +++C
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAK--SVMKAALGANHTLFLTKDGKVYSC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G +GQLGH R P VS ++ +ACG HSL L + +V+ +GS
Sbjct: 59 GSNDYGQLGHDQPRKR--PQLVSGLDAYSIINVACGEMHSLALSR---WGEVFSWGSDNY 113
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-------- 262
GQLG + +P++ L ++V I+A S AL+ G ++ WG
Sbjct: 114 GQLGHQLGGTLQI-VPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLG 172
Query: 263 ----FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+ ST C SL S + F+ A G NH ++ G V G + +G L + VS
Sbjct: 173 TITPYESTPTTVC--SL-SGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVS 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P ++ L +V I+ G E S +T + + + G G +GQLG G T ++I
Sbjct: 230 KKFP-----TQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEIL 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRQV 288
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 143/334 (42%), Gaps = 35/334 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++ WG+ G+LG G + +E +P+ L+ SV A G H L LT GKV
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTK-----DGKV 55
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+S G GQLGH + P+ V+ D Y+I +++ G HS +S G +F+ G
Sbjct: 56 YSCGSNDYGQLGHDQPRKR--PQLVSGLDA--YSIINVACGEMHSLALSRWGEVFSWGSD 111
Query: 154 TFGQLGH---GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+GQLGH G + P + S V QIA G RHS+ L +++ +G+
Sbjct: 112 NYGQLGHQLGGTLQ--IVPKLIKSLAKYQVVQIAAGQRHSVALTN---AGEIFVWGANDF 166
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
GQLG+ S P L I I+ + + A+S G ++ WG+ G N
Sbjct: 167 GQLGLGTITPYE-STPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLN 225
Query: 265 STSDVNCPQSLPSSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
T P L +L S+ G LT DG V G +G L +
Sbjct: 226 DTVSKKFPTQL-RTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEIL 284
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
P +V L G + QI+ G +HS +R
Sbjct: 285 P-----RQVLELMGSTITQISCGRQHSLAFVPSR 313
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
KV+S G+ GQLG HD+ PQL++ S+ +ACG H LAL+ G+
Sbjct: 54 KVYSCGSNDYGQLG----HDQPRKRPQLVSGLDAYSIINVACGEMHSLALSR-----WGE 104
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG + GQLGH ++ L P +Y + I+AG HS ++++G +F G
Sbjct: 105 VFSWGSDNYGQLGH-QLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGA 163
Query: 153 GTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
FGQLG G + S+P V S IACG H+ + K V+G+G G
Sbjct: 164 NDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSK---SGAVFGWGKNING 220
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
QLG++ D + S P L + + IS + S L+ +G +++ G G
Sbjct: 221 QLGLN-DTV-SKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAG 269
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSV--SMLACGGAHVLALTSPSSVIGG 91
+++ WGA GQLG G + E +P + SLS + +++ACG H A++ G
Sbjct: 157 EIFVWGANDFGQLGLGTITPYESTPT--TVCSLSGIPFALIACGANHTFAVSK-----SG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VF WG+ +GQLG + V +P + R + IS G S F++ G +F+CG
Sbjct: 210 AVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSR--VRFISCGDEFSTFLTLDGGVFSCG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGHG + P +V + + QI+CG +HSL + +VY +G G G
Sbjct: 268 AGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPS--RGRVYSYGLGGAG 325
Query: 212 QLGVSKDRIRSVSLPQVTIG 231
QLG+ K + S PQV +G
Sbjct: 326 QLGLRKP--SNASTPQVVLG 343
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 147 LFTCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
+F G G+LG G +P + F K+V + A G H+L L KD +VY
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKD---GKVYS 57
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--- 261
GS GQLG + R R PQ+ GL I+ ++ S ALS G +++WG
Sbjct: 58 CGSNDYGQLGHDQPRKR----PQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNY 113
Query: 262 ---GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
G + L SL+ Q A G H + LT GE+ + G + G L
Sbjct: 114 GQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLG--- 170
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD 375
+ + P V +L G+ IA GA H+ V+++ A+ WG +GQLGL +T
Sbjct: 171 -LGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVS 229
Query: 376 QIHP-----------KVVNLGDEF 388
+ P + ++ GDEF
Sbjct: 230 KKFPTQLRTLRNSRVRFISCGDEF 253
>gi|409911788|ref|YP_006890253.1| lipoprotein [Geobacter sulfurreducens KN400]
gi|298505363|gb|ADI84086.1| ATS1 domain repeat protein [Geobacter sulfurreducens KN400]
Length = 2082
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 163/375 (43%), Gaps = 46/375 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WG GQLG G +P +L+ + S+ + GGA L L S G ++
Sbjct: 367 TVFGWGGNGAGQLGNGTFGAVTAPTVLSAGA-SAWLGVEPGGAFSLGLRS-----NGTLW 420
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G + P PV G+ T + G HS V G L+ GD +
Sbjct: 421 AWGGNASGQLGDGTTTPSAIPVPVVGDAGNWRTT---ATGTAHSVAVRADGTLWAWGDNS 477
Query: 155 FGQLGHGDYRSHSSPVKVS----SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GQLG G + S+P +++ + + +A G H++ L D ++ +G
Sbjct: 478 SGQLGIGSTVAASTPQQITVTNPASAGNDWAAVAAGEAHTIGLKAD---GTLWAWGDNTF 534
Query: 211 GQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----- 262
GQLG + +R V + G D V ++A G S AL A+G ++TWG
Sbjct: 535 GQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQL 594
Query: 263 ------FNSTSDVNCPQSL----PSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHH 308
+ N P L P S +F+ + A G +H L L DG + G +
Sbjct: 595 GTDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLALQADGTLWAWGANSV 654
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L + ++ P+ +V N +GV + +AAG HS + + WG GQL
Sbjct: 655 GQLGNGVTTATFTPV-----QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQL 709
Query: 369 GLG---NTCDQIHPK 380
G G D ++P+
Sbjct: 710 GTGPHPGDADPLNPQ 724
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 162/391 (41%), Gaps = 63/391 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLG G P + + + A G AH +A+ + G ++
Sbjct: 418 TLWAWGGNASGQLGDGTTTPSAIPVPV-VGDAGNWRTTATGTAHSVAVRA-----DGTLW 471
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG SSGQLG G V A P+ +T + G+ + ++AG H+ + G L+
Sbjct: 472 AWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWA--AVAAGEAHTIGLKADGTLWAW 529
Query: 151 GDGTFGQLGHGDYRSH-SSPVKVSS----FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
GD TFGQLG G S+ ++PV++ + ++N +A G SL L D ++ +
Sbjct: 530 GDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQAD---GTIWTW 586
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGL---------HDIEIVGISANGDRSAALSAEGHL 256
G QLG + + V L + V I+A D AL A+G L
Sbjct: 587 GDNSLLQLGTDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLALQADGTL 646
Query: 257 YTWGR------GFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+ WG G T+ P + ++ + + A G +H L DG + G +
Sbjct: 647 WAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTS 706
Query: 309 GML-----------------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
G L + P R+ ++ P+S A + + AG HSA +
Sbjct: 707 GQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDW---------LVATAGGSHSAAL 757
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
N + TWG GQLG G T + P +
Sbjct: 758 KSNGTLWTWGQNTSGQLGNGTTTEADIPTAL 788
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 155/364 (42%), Gaps = 38/364 (10%)
Query: 39 WGAGTD--GQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W AG++ GQLG G + SP + + +A G H L + + G +++W
Sbjct: 54 WAAGSNQFGQLGDGTGINRTSP----VQVPGTWKTVAAGTTHSLGIKA-----DGSLWAW 104
Query: 97 GRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
G GQLG +G++ + P+ G+ + +SAG S + G L++ G+
Sbjct: 105 GSNLFGQLGQPLVNGQLATNKF-SPIRIGTGNDW--VAVSAGELTSFGLKGDGTLWSWGN 161
Query: 153 GTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
FG+LG G S PV+V + N +A G H+L L D ++ +G+
Sbjct: 162 NLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD---GTLWAWGANLT 218
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---- 266
GQLG I P + IG D + ISA S AL A+G L++WG+
Sbjct: 219 GQLGTGGTGILPNPTP-LKIG-TDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNG 276
Query: 267 -----SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++V P + + + A G H + L +G V G + G + D + +
Sbjct: 277 VALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRST 336
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P + V+ + V + IAAG S V N + WG GQLG G P V
Sbjct: 337 PTLI----VAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTV 392
Query: 382 VNLG 385
++ G
Sbjct: 393 LSAG 396
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 165/385 (42%), Gaps = 28/385 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WGA GQLGTG +P L + + + ++ G H +AL + G ++
Sbjct: 209 TLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKA-----DGSLW 263
Query: 95 SWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWG+ G+LG+G + A P G + I+AG H+ + +G + G+
Sbjct: 264 SWGQNLFGELGNGVALPGANVTTPTRVGTGSDW--VAIAAGALHTVALHRNGTVSAWGNN 321
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G G + S+P + + V N IA G S +L + V+G+G GQ
Sbjct: 322 AQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLAN---GTVFGWGGNGAGQ 378
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG +V+ P V + +G+ G S L + G L+ WG N++ +
Sbjct: 379 LG--NGTFGAVTAPTV-LSAGASAWLGVEPGGAFSLGLRSNGTLWAWGG--NASGQLGDG 433
Query: 273 QSLPSSL---------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ PS++ ++ A G H + + DG + G + G L V+++ P
Sbjct: 434 TTTPSAIPVPVVGDAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQ 493
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPKVV 382
+ + ++ G +AAG H+ + + + WG GQLG G T ++ P +
Sbjct: 494 QITVTNPASA-GNDWAAVAAGEAHTIGLKADGTLWAWGDNTFGQLGDGTGTSNRTTPVQI 552
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAI 407
G+ + V G F+ A+
Sbjct: 553 VTGNPGNFDRNWVAVAAGGVFSLAL 577
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 42/357 (11%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
S+V +A GG HVL L S G +++ G GQLG G ++ P V
Sbjct: 32 SAVPHVAAGGNHVLTLRS-----DGTLWAAGSNQFGQLGDGTGINRTSPVQV------PG 80
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG----HGDYRSHS-SPVKVSSFVNKNVH 181
T ++AG HS + G L+ G FGQLG +G ++ SP+++ + +
Sbjct: 81 TWKTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT--GNDWV 138
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
++ G S L D ++ +G+ G+LG R + V L + V ++
Sbjct: 139 AVSAGELTSFGLKGD---GTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVA 195
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSL--------SFSQAALGWNHVLV 293
A G+ + AL A+G L+ WG LP+ ++ + G H +
Sbjct: 196 AGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVA 255
Query: 294 LTGDGEVLMLGGSHHGMLSDPERV---SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L DG + G + G L + + + T P V G + IAAGA H+
Sbjct: 256 LKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG-------TGSDWVAIAAGALHTVA 308
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ N + WG G +G G ++ P ++ N + + G+G ++++
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVN---NVAIAAGTGVSFSV 362
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 155/419 (36%), Gaps = 90/419 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG+ GQLG ++ +L+ + + + + A LTS G ++
Sbjct: 100 SLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAG--ELTSFGLKGDGTLW 157
Query: 95 SWGRGSSGQLGHGEMVD------------------------------------------- 111
SWG G+LG G V
Sbjct: 158 SWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANL 217
Query: 112 ---------ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG- 161
+ P P G T ISAG HS + G L++ G FG+LG+G
Sbjct: 218 TGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGV 277
Query: 162 --DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
+ ++P +V + + IA G H++ L ++ V +G+ +G +G
Sbjct: 278 ALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRN---GTVSAWGNNAQGAVG--DGT 330
Query: 220 IRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCP 272
+ + S P + + + + V I+A S ++ A G ++ WG G + V P
Sbjct: 331 VANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAP 390
Query: 273 QSLPSSLSFSQAALGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
L S A W V L L +G + GG+ G L D +T P ++
Sbjct: 391 TVL------SAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGD----GTTTPSAI 440
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ V + + A G HS V + + WG GQLG+G+T P+ + +
Sbjct: 441 PVPVVGDAGNWRT--TATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITV 497
>gi|156356052|ref|XP_001623745.1| predicted protein [Nematostella vectensis]
gi|156210473|gb|EDO31645.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 170/387 (43%), Gaps = 41/387 (10%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
GA + GQL G D + P + + + V + GG H +T ++++ G
Sbjct: 8 GANSYGQLACGHTDDVIKPAV-HSNWKDDVLCITGGGGHTAMITDSR-----ELYTCGWN 61
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTI---THISAGWNHSGFVSD--SGCLFTCGDGT 154
+ GQLG G+ ++ + + HR I H+S GWNH+ ++ +G L G
Sbjct: 62 NRGQLGLGDTINRI--------ELHRVLIPPVKHVSCGWNHTLAITGNYTGHLLVFGSNA 113
Query: 155 FGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
FGQLG G ++P V +A G+RHS+ +L G VY F S + L
Sbjct: 114 FGQLGIGRIGWQCTTPTSCEVSPGSCVTDVAAGLRHSVAVLATKYG--VYFFESYSQFLL 171
Query: 214 GVSK--DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
VS I L V + I+ + L+ G +Y WG + +
Sbjct: 172 NVSTYLSHILKYRLLFV-VSFEGCRGKSIAVGLHHTVLLTDAGAVYCWGSNQHGQCGASL 230
Query: 272 PQSLPSSLS----FSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP 322
QS+P + + A + GW+HV+V T G V G + +G L + +
Sbjct: 231 LQSVPVPMRVRGPLNDACVREIHSGWSHVVVATDQGRVYTWGRADYGQLGGGDELQQNGH 290
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
S +V L GVK Q+A GAEHS ++ + + TWGW EHG G G+ + + P +V
Sbjct: 291 -SAEPREVKCLRGVK--QLACGAEHSIAISGDGQVRTWGWNEHGMCGTGDESNVLSPVLV 347
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ R + V CGSG ++A+ +
Sbjct: 348 SA----VQRSLVMLVGCGSGHSFAVVK 370
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WG+ GQ G L P ++ + + V + G +HV+ T G+V+
Sbjct: 215 VYCWGSNQHGQCGASLLQSVPVPMRVRGPLNDACVREIHSGWSHVVVATDQ-----GRVY 269
Query: 95 SWGRGSSGQLGHGEMVD----ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+WGR GQLG G+ + + P+ V G + ++ G HS +S G + T
Sbjct: 270 TWGRADYGQLGGGDELQQNGHSAEPREVKCLRG----VKQLACGAEHSIAISGDGQVRTW 325
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
G G G GD + SPV VS+ V + CG HS ++K
Sbjct: 326 GWNEHGMCGTGDESNVLSPVLVSAVQRSLVMLVGCGSGHSFAVVK 370
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDEL-----SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI 89
+V++WG GQLG G DEL S + + L V LACG H +A++
Sbjct: 267 RVYTWGRADYGQLGGG---DELQQNGHSAEPREVKCLRGVKQLACGAEHSIAISGD---- 319
Query: 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVT 119
G+V +WG G G G+ + L P V+
Sbjct: 320 -GQVRTWGWNEHGMCGTGDESNVLSPVLVS 348
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 115 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 167
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 227
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 228 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 282
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + A G H + T DGEV G
Sbjct: 283 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 342
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+ G L D + RP VA L G KV ++A G+ H+
Sbjct: 343 DNDEGQLGDGTTNAIQRPRLVAA-----LQGKKVNRVACGSAHT 381
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA-----GDLY 181
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 182 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 241
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKS---GAVYTWGKGDYHRLG 298
Query: 215 -VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 299 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 342
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 20 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 77
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 78 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 134
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 135 EDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 192
Query: 264 NSTSDVNCPQSLPSSLSFSQ-----AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 193 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 252
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 253 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 307
Query: 379 PKVVN 383
P+ V
Sbjct: 308 PRQVQ 312
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 22 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 77
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 78 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 137
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 138 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 192
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 193 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 221
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 296 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 348
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V +ACG +L
Sbjct: 349 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 408
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 409 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 463
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 464 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 485
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 486 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 534
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 535 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 566
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 362
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 363 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 422
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 423 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 479
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 480 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 523
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLR--PVQLIGGEQTLFAVTADGKLYAT 258
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 259 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 315
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 316 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 373
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 374 HSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 433
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 434 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 488
Query: 379 PKVVN 383
P+ V
Sbjct: 489 PRQVQ 493
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 203 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 258
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 259 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 318
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 319 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 373
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E ++V CGSG
Sbjct: 374 HSDSEDQLKPKLV----EALQGHRVVDVACGSG 402
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 518 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 576
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 156/352 (44%), Gaps = 29/352 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG QLG G + +P ++N S S + +A G H A+T+ GG V WGR
Sbjct: 335 WGVNQYSQLGDGTTTQQSTPVVVNGLS-SRAAAIAAGDGHTCAMTT-----GGGVSCWGR 388
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
SGQLG G P V +G + I+AG +H+ +S G + G+ GQL
Sbjct: 389 NWSGQLGDGTTTQRRTPMQV---EGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQL 445
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G G S+PV+V + V I G H+ L + V +G GQLG
Sbjct: 446 GDGTTIQRSTPVQVEGL-SSGVVAITAGDSHTCALSTE---GGVTCWGGNGSGQLGNGTT 501
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCP 272
RS P GL ++ I+A + AL+ G + WG G +T+ N P
Sbjct: 502 TQRST--PVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMP 558
Query: 273 QSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
++ S + A G +H L+ +G V G + + L D R + P+ V E +S
Sbjct: 559 VNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQV--EGLS 616
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ V IAAG H+ + + + WGW +GQLG G T ++ P VVN
Sbjct: 617 S----GVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVN 664
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 154/343 (44%), Gaps = 32/343 (9%)
Query: 51 RLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE 108
L+ EL +L N++S + +A G A+ ALT+ S+VI WG GQLG G
Sbjct: 38 NLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVI-----CWGNNEFGQLGDGT 92
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
+ P V +G + I+AG+ H+ ++ SG + G+ GQLG+G +
Sbjct: 93 TIQRNTPVAV---NGLSSGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRT 149
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
PV+V+ + V IA G H+ L D V +GS GQLG RS P
Sbjct: 150 PVQVAGL-SSGVAAIAAGEYHTCALTTD---GAVTCWGSNGYGQLGDGTTTQRST--PVQ 203
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFS 282
GL + I+A G + AL+ G + WGR N +T+ + P ++ LS
Sbjct: 204 VAGLSS-GVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLG-LSSE 261
Query: 283 QAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
AA+ G + LT G V G + G L D + P+ V V GV I
Sbjct: 262 VAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDV----VGLSSGVTAI- 316
Query: 341 IAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
AAG +H+ +T + WG ++ QLG G T Q P VVN
Sbjct: 317 -AAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVN 358
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 150/353 (42%), Gaps = 31/353 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG GQLG G +P Q+ LSS V+ + G +H AL++ G V WG
Sbjct: 386 WGRNWSGQLGDGTTTQRRTPMQVEGLSS--GVADITAGDSHTCALSTE-----GGVTCWG 438
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG G + P V +G + I+AG +H+ +S G + G GQ
Sbjct: 439 NNESGQLGDGTTIQRSTPVQV---EGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQ 495
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG+G S+PV+V + V I G H+ L G V +G GQLG
Sbjct: 496 LGNGTTTQRSTPVQVEGL-SSGVMAITAGDSHTCALTT---GGGVTCWGGNWYGQLGDGT 551
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNC 271
R+ +P +GL + I+A G + ALS EG + WG G + ++ N
Sbjct: 552 TTQRN--MPVNVVGLSS-GVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNT 608
Query: 272 PQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P + S + A G+ H L GEV G + +G L D P+ V
Sbjct: 609 PVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVV----- 663
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
N +V I AG H+ ++ + WGW ++ QLG G + P V+
Sbjct: 664 -NGLSSEVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPMDVD 715
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 145/351 (41%), Gaps = 29/351 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG GQLG G +P +N S S V +A G AH ALT+ G V WG
Sbjct: 80 WGNNEFGQLGDGTTIQRNTPVAVNGLS-SGVVAIAAGYAHTCALTTS-----GGVSCWGN 133
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
SGQLG+G + P V G + I+AG H+ ++ G + G +GQL
Sbjct: 134 NESGQLGNGITIQRRTPVQVA---GLSSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQL 190
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218
G G S+PV+V+ + V I G H+ L G V +G GQLG
Sbjct: 191 GDGTTTQRSTPVQVAGL-SSGVTAITAGGSHTCALTT---GGAVTCWGRNGNGQLGDGTT 246
Query: 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP 272
RS P +GL E+ I+A + AL+ G + WG G +T + + P
Sbjct: 247 TQRST--PVNVLGLSS-EVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTP 303
Query: 273 QSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
+ S + A G +H +T G V G + + L D + P+ V
Sbjct: 304 VDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPV------VV 357
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
N + IAAG H+ +T + WG GQLG G T + P V
Sbjct: 358 NGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQV 408
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 146/349 (41%), Gaps = 31/349 (8%)
Query: 39 WGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG+ GQLG G +P Q+ LS S V+ + GG+H ALT+ GG V WG
Sbjct: 182 WGSNGYGQLGDGTTTQRSTPVQVAGLS--SGVTAITAGGSHTCALTT-----GGAVTCWG 234
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
R +GQLG G P V G + I+AG ++ ++ G + G GQ
Sbjct: 235 RNGNGQLGDGTTTQRSTPVNVL---GLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQ 291
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LG G S+PV V + V IA G H+ + G V +G + QLG
Sbjct: 292 LGDGTTDERSTPVDVVGL-SSGVTAIAAGNDHTCAITT---GGGVSCWGVNQYSQLG--D 345
Query: 218 DRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNC 271
S P V GL I+A + A++ G + WGR G +T+
Sbjct: 346 GTTTQQSTPVVVNGLSS-RAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRT 404
Query: 272 PQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
P + S + G +H L+ +G V G + G L D + + P+ V E +
Sbjct: 405 PMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQV--EGL 462
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
S+ V+ I AG H+ ++ + WG GQLG G T + P
Sbjct: 463 SS----GVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTP 507
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 158/358 (44%), Gaps = 38/358 (10%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGKVFSWG 97
WG +GQLG G +P +N+ LSS V+ + G + ALT+ GG V WG
Sbjct: 233 WGRNGNGQLGDGTTTQRSTP--VNVLGLSSEVAAITAGDVYTCALTT-----GGGVTCWG 285
Query: 98 RGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
SGQLG G + P V G +T I+AG +H+ ++ G + G + Q
Sbjct: 286 ANWSGQLGDGTTDERSTPVDVV---GLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQ 342
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GV 215
LG G S+PV V+ ++ IA G H+ + G V +G GQL G
Sbjct: 343 LGDGTTTQQSTPVVVNGLSSR-AAAIAAGDGHTCAMTT---GGGVSCWGRNWSGQLGDGT 398
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ R + + ++ G+ D I+A + ALS EG + WG G +T
Sbjct: 399 TTQRRTPMQVEGLSSGVAD-----ITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQR 453
Query: 270 NCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
+ P + LS A+ G +H L+ +G V GG+ G L + + P+ V
Sbjct: 454 STPVQV-EGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQV-- 510
Query: 328 EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP-KVVNL 384
E +S+ V+ I AG H+ +T + WG +GQLG G T + P VV L
Sbjct: 511 EGLSS----GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGL 564
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V WG GQLG G ++P ++N S S V+ + G AH AL++ GG V
Sbjct: 637 EVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS-SEVAAIVAGYAHTCALST-----GGGVT 690
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG QLG+G + P V DG + ++AG H+ +S G + G
Sbjct: 691 CWGWNKYYQLGNGTISQRSIPMDV---DGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDV 747
Query: 155 FGQLGHGDYRSHSSPVKVS 173
+GQLG G ++PV V+
Sbjct: 748 YGQLGVGTIAYRTTPVDVT 766
>gi|39996353|ref|NP_952304.1| lipoprotein [Geobacter sulfurreducens PCA]
gi|39983233|gb|AAR34627.1| ATS1 domain repeat protein [Geobacter sulfurreducens PCA]
Length = 2082
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 163/375 (43%), Gaps = 46/375 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WG GQLG G +P +L+ + S+ + GGA L L S G ++
Sbjct: 367 TVFGWGGNGAGQLGNGTFGAVTAPTVLSAGA-SAWLGVEPGGAFSLGLRS-----NGTLW 420
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG +SGQLG G + P PV G+ T + G HS V G L+ GD +
Sbjct: 421 AWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTT---ATGTAHSVAVRADGTLWAWGDNS 477
Query: 155 FGQLGHGDYRSHSSPVKVS----SFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GQLG G + S+P +++ + + +A G HSL L D ++ +G
Sbjct: 478 SGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKAD---GTLWSWGDNTF 534
Query: 211 GQLGV---SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----- 262
GQLG + +R V + G D V ++A G S AL A+G ++TWG
Sbjct: 535 GQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQL 594
Query: 263 ------FNSTSDVNCPQSL----PSSLSFSQA----ALGWNHVLVLTGDGEVLMLGGSHH 308
+ N P L P S +F+ + A G +H L L DG + G +
Sbjct: 595 GTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSV 654
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L + ++ P+ +V N +GV + +AAG HS + + WG GQL
Sbjct: 655 GQLGNGVTTATFTPV-----QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQL 709
Query: 369 GLG---NTCDQIHPK 380
G G D ++P+
Sbjct: 710 GTGPHPGDADPLNPQ 724
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 163/391 (41%), Gaps = 63/391 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG GQLG G P + + + A G AH +A+ + G ++
Sbjct: 418 TLWAWGGNASGQLGDGTTTPSAIPVPV-VGGAGNWRTTATGTAHSVAVRA-----DGTLW 471
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFD----GHRYTITHISAGWNHSGFVSDSGCLFTC 150
+WG SSGQLG G V A P+ +T + G+ +T ++ G HS + G L++
Sbjct: 472 AWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWT--AVAGGGAHSLGLKADGTLWSW 529
Query: 151 GDGTFGQLGHGDYRSH-SSPVKVSS----FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
GD TFGQLG G S+ ++PV++ + ++N +A G SL L D ++ +
Sbjct: 530 GDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLALQAD---GTIWTW 586
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGL---------HDIEIVGISANGDRSAALSAEGHL 256
G QLG + + V L + V I+A D +L A+G L
Sbjct: 587 GDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTL 646
Query: 257 YTWGR------GFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+ WG G T+ P + ++ + + A G +H L DG + G +
Sbjct: 647 WAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTS 706
Query: 309 GML-----------------SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
G L + P R+ ++ P+S A + + AG HSA +
Sbjct: 707 GQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDW---------LVATAGGSHSAAL 757
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
N + TWG GQLG G T + P +
Sbjct: 758 KSNGTLWTWGQNTSGQLGNGTTTEADIPTAL 788
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 155/364 (42%), Gaps = 38/364 (10%)
Query: 39 WGAGTD--GQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
W AG++ GQLG G + SP + + +A G H L + + G +++W
Sbjct: 54 WAAGSNQFGQLGDGTGINRTSP----VQVPGTWKTVAAGTTHSLGIKA-----DGSLWAW 104
Query: 97 GRGSSGQLG----HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
G GQLG +G++ + P+ G+ + +SAG S + G L++ G+
Sbjct: 105 GSNLFGQLGQPLVNGQLATNKF-SPIRIGTGNDW--VAVSAGELTSFGLKGDGTLWSWGN 161
Query: 153 GTFGQLGHGDYRSHSSPVKVSS--FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
FG+LG G S PV+V + N +A G H+L L D ++ +G+
Sbjct: 162 NLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQAD---GTLWAWGANLT 218
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---- 266
GQLG I P + IG D + ISA S AL A+G L++WG+
Sbjct: 219 GQLGTGGTGILPNPTP-LKIG-TDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNG 276
Query: 267 -----SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
++V P + + + A G H + L +G V G + G + D + +
Sbjct: 277 VALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRST 336
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P + V+ + V + IAAG S V N + WG GQLG G P V
Sbjct: 337 PTLI----VAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTV 392
Query: 382 VNLG 385
++ G
Sbjct: 393 LSAG 396
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 165/385 (42%), Gaps = 28/385 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WGA GQLGTG +P L + + + ++ G H +AL + G ++
Sbjct: 209 TLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKA-----DGSLW 263
Query: 95 SWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
SWG+ G+LG+G + A P G + I+AG H+ + +G + G+
Sbjct: 264 SWGQNLFGELGNGVALPGANVTTPTRVGTGSDW--VAIAAGALHTVALHRNGTVSAWGNN 321
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G +G G + S+P + + V N IA G S +L + V+G+G GQ
Sbjct: 322 AQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLAN---GTVFGWGGNGAGQ 378
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272
LG +V+ P V + +G+ G S L + G L+ WG N++ +
Sbjct: 379 LG--NGTFGAVTAPTV-LSAGASAWLGVEPGGAFSLGLRSNGTLWAWGG--NASGQLGDG 433
Query: 273 QSLPSSL---------SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ PS++ ++ A G H + + DG + G + G L V+++ P
Sbjct: 434 TTTPSAIPVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQ 493
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN-TCDQIHPKVV 382
+ + ++ G +A G HS + + + +WG GQLG G T ++ P +
Sbjct: 494 QITVTNPASA-GNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQI 552
Query: 383 NLGDEFQNRDTQLEVFCGSGFTYAI 407
G+ + V G F+ A+
Sbjct: 553 VTGNPGNFDRNWVAVAAGGVFSLAL 577
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 146/357 (40%), Gaps = 42/357 (11%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
S+V +A GG HVL L S G +++ G GQLG G ++ P V
Sbjct: 32 SAVPHVAAGGNHVLTLRS-----DGTLWAAGSNQFGQLGDGTGINRTSPVQV------PG 80
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG----HGDYRSHS-SPVKVSSFVNKNVH 181
T ++AG HS + G L+ G FGQLG +G ++ SP+++ + +
Sbjct: 81 TWKTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGT--GNDWV 138
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
++ G S L D ++ +G+ G+LG R + V L + V ++
Sbjct: 139 AVSAGELTSFGLKGD---GTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVA 195
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSL--------SFSQAALGWNHVLV 293
A G+ + AL A+G L+ WG LP+ ++ + G H +
Sbjct: 196 AGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVA 255
Query: 294 LTGDGEVLMLGGSHHGMLSDPERV---SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
L DG + G + G L + + + T P V G + IAAGA H+
Sbjct: 256 LKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG-------TGSDWVAIAAGALHTVA 308
Query: 351 VTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+ N + WG G +G G ++ P ++ N + + G+G ++++
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVN---NVAIAAGTGVSFSV 362
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 154/419 (36%), Gaps = 90/419 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+W+WG+ GQLG ++ +L+ + + + + A LTS G ++
Sbjct: 100 SLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSAG--ELTSFGLKGDGTLW 157
Query: 95 SWGRGSSGQLGHGEMVD------------------------------------------- 111
SWG G+LG G V
Sbjct: 158 SWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWGANL 217
Query: 112 ---------ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG- 161
+ P P G T ISAG HS + G L++ G FG+LG+G
Sbjct: 218 TGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGV 277
Query: 162 --DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219
+ ++P +V + + IA G H++ L ++ V +G+ +G +G
Sbjct: 278 ALPGANVTTPTRVGT--GSDWVAIAAGALHTVALHRN---GTVSAWGNNAQGAVG--DGT 330
Query: 220 IRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWG------RGFNSTSDVNCP 272
+ + S P + + + + V I+A S ++ A G ++ WG G + V P
Sbjct: 331 VANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAP 390
Query: 273 QSLPSSLSFSQAALGWNHV-------LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
L S A W V L L +G + GG+ G L D +T P ++
Sbjct: 391 TVL------SAGASAWLGVEPGGAFSLGLRSNGTLWAWGGNASGQLGD----GTTTPSAI 440
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
+ V + A G HS V + + WG GQLG+G+T P+ + +
Sbjct: 441 PVPVVGGAGNWRT--TATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITV 497
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 20 AKPKIEEEEEEQQVVKV----------------WSWGAGTDGQLGTGR-LHDELSPQLLN 62
A P++ ++ +Q +++V ++WG + GQLG G+ + SPQ +
Sbjct: 8 AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVR 67
Query: 63 LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFD 122
++ +A GGAH AL+ + G VF WG ++GQLG + D P V
Sbjct: 68 SLEGIPLAQVAAGGAHSFALS-----LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
+ + +IS G H+ ++ SG +FT G G+ GQLGHG +P +V + V Q
Sbjct: 123 TQK--VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQ 180
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
IACG +H+L + +Y FG G RGQLG
Sbjct: 181 IACGRQHTLAFVPS--SGLIYAFGCGARGQLG 210
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
P+L+ + ++ ++CG H LAL + G+ F+WG+ S GQLG G E P+
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAA-----DGQFFTWGKNSHGQLGLGKEFPSQTSPQ 64
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
V +G + ++AG HS +S SG +F G GQLG D + SP V
Sbjct: 65 RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHD 234
+ V I+CG H+ VL K V+ FG+G GQL G D + P+ + L
Sbjct: 123 TQKVVYISCGEEHTAVLTKS---GGVFTFGAGSCGQLGHGSMNDEVN----PRRVLELMG 175
Query: 235 IEIVGISANGDRSAAL-SAEGHLYTWGRGFNS------TSDVNCP 272
E+ I+ + A + G +Y +G G T +V CP
Sbjct: 176 SEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 105/260 (40%), Gaps = 31/260 (11%)
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228
P + + + Q++CG H L L D Q + +G GQLG+ K+ S + PQ
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLGLGKE-FPSQTSPQR 65
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLPSSLS 280
L I + ++A G S ALS G ++ WG G + D P L +
Sbjct: 66 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 125
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQ 340
+ G H VLT G V G G L P +V L G +V Q
Sbjct: 126 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNP-----RRVLELMGSEVTQ 180
Query: 341 IAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN------------LGDE 387
IA G +H+ A V + I +G G GQLG G+TC+ P V D
Sbjct: 181 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADR 240
Query: 388 FQNRDTQLEVFCGSGFTYAI 407
F+ R + ++F G T+ +
Sbjct: 241 FKYRVVK-QIFSGGDQTFVL 259
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 81/197 (41%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGHG M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 148 FGAGSCGQLGHGSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + GQL
Sbjct: 206 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 235
Query: 215 VSKDRIRSVSLPQVTIG 231
DR + + Q+ G
Sbjct: 236 ARADRFKYRVVKQIFSG 252
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLS- 280
SV++P++ L+ I+ +S AL+A+G +TWG+ NS + + PS S
Sbjct: 6 SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGLGKEFPSQTSP 63
Query: 281 ----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+Q A G H L+ G V G ++ G L + P V L +
Sbjct: 64 QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRT 123
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV--NLGDEF 388
KV+ I+ G EH+AV+T++ + T+G G GQLG G+ D+++P+ V +G E
Sbjct: 124 Q-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEV 178
Query: 389 QN----RDTQLEVFCGSGFTYAI 407
R L SG YA
Sbjct: 179 TQIACGRQHTLAFVPSSGLIYAF 201
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 20/251 (7%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL + G V SWGRG GQLGHG+ D L P ++ FDG I
Sbjct: 14 VLLISAGASHTVAL-----LTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ--DI 66
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +++ S SG +++ G G FG+LGHGD P + + + QI+CG
Sbjct: 67 VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGD 126
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H L + + N+V +G + G+LG+ + V PQ + I I ++A + S
Sbjct: 127 CHCLAVTME---NKVLSWGRNQNGELGLGTTKDSHV--PQKILAFEGIRIKMVAAGAEHS 181
Query: 248 AALSAEGHLYTWG------RGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEV 300
A++ +G LY WG G T+D P+ + + GW H + ++ G +
Sbjct: 182 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGL 241
Query: 301 LMLGGSHHGML 311
G S +G L
Sbjct: 242 YTHGWSKYGQL 252
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 16/227 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D L P L+ + + CG + +A + G V+S
Sbjct: 33 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKS----GKDVYS 88
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG+ D P P+ G R I IS G H V+ + + G
Sbjct: 89 WGWGDFGRLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQN 146
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G + P K+ +F + +A G HS+ + +D +YG+G G+ G LG+
Sbjct: 147 GELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED---GDLYGWGWGRYGNLGL 203
Query: 216 --SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+ DR+ +P+ + + +IV +S + ++S+ G LYT G
Sbjct: 204 GDTNDRL----IPE-KVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 245
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 19/267 (7%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
ISAG +H+ + + + G G GQLGHGD P K+S+F +++ + CG ++
Sbjct: 17 ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 76
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
+ K G VY +G G G+LG + +P L + I IS A+
Sbjct: 77 VARSKS--GKDVYSWGWGDFGRLGHGDPS--DLFIPHPIRALQGLRIKQISCGDCHCLAV 132
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLM 302
+ E + +WGR G +T D + PQ + + + A G H + +T DG++
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 192
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G +G L + P EKV N+DG K++ ++ G H+ ++ + + T GW
Sbjct: 193 WGWGRYGNLGLGDTNDRLIP-----EKV-NIDGDKIVMVSCGWRHTISISSSGGLYTHGW 246
Query: 363 GEHGQLGLGNTCDQIHP-KVVNLGDEF 388
++GQLG G+ D + P KV L D+
Sbjct: 247 SKYGQLGHGDFEDCLVPRKVQALSDKL 273
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 117/237 (49%), Gaps = 28/237 (11%)
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
I+ G H++ LL GN V +G G+ GQLG + DR+ LP +IV +
Sbjct: 17 ISAGASHTVALLT---GNVVCSWGRGEDGQLGHGDTDDRL----LPTKLSAFDGQDIVSV 69
Query: 241 SANGDRSAALSAEGH-LYTWG------RGFNSTSDVNCPQSLPS--SLSFSQAALGWNHV 291
+ D + A S G +Y+WG G SD+ P + + L Q + G H
Sbjct: 70 TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC 129
Query: 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
L +T + +VL G + +G L S P +K+ +G+++ +AAGAEHS +
Sbjct: 130 LAVTMENKVLSWGRNQNGELGLGTTKDSHVP-----QKILAFEGIRIKMVAAGAEHSVAI 184
Query: 352 TENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
TE+ + WGWG +G LGLG+T D++ P+ VN+ + D + V CG T +IS
Sbjct: 185 TEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI-----DGDKIVMVSCGWRHTISIS 236
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
KV SWG +G+LG G D PQ + + M+A G H +A+T G ++
Sbjct: 137 KVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED-----GDLY 191
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ V DG + I +S GW H+ +S SG L+T G
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI-DGDK--IVMVSCGWRHTISISSSGGLYTHGWSK 248
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+GQLGHGD+ P KV + +K + Q+
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQV 277
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEV 397
V+ I+AGA H+ + + +WG GE GQLG G+T D++ P ++ F +D + V
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLS---AFDGQDI-VSV 69
Query: 398 FCGSGFTYAISR 409
CG+ +T A S+
Sbjct: 70 TCGADYTVARSK 81
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G V
Sbjct: 157 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 270 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 327
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + LP ++++ ++ + + W + NS VN +
Sbjct: 328 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 385
Query: 274 SLPS 277
++P+
Sbjct: 386 TIPT 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 137 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 192
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL +L + A G
Sbjct: 193 AQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGG 251
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 306
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 307 LAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 28/254 (11%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHR 125
+ + CG H LAL+ GG++F+WG+ GQLG G + P+ V G
Sbjct: 137 KKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG-- 189
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G FGQLG G S SP + + N+ V +AC
Sbjct: 190 VPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLAC 249
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G HS +L +D L ++ FG+GK GQLG +++ +R + ++ +G +I
Sbjct: 250 GGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGR 303
Query: 244 GDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
A +S G ++++G G + T D P LP +S S+ +H T +
Sbjct: 304 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSE 357
Query: 298 GEVLMLGGSHHGML 311
E++M+ G + +L
Sbjct: 358 KELIMIAGGNQSIL 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L D GK + S +RS S+ L + +
Sbjct: 96 NMKIHSVDQGADHMLILSSD-----------GKPFEYDYSMKHLRSESI------LQEKK 138
Query: 237 IVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAAL 286
I+ I+ S ALS G L+ WG R F ST+ + L + + +Q +
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLAQISA 197
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ G V G + G L S P + LD KV +A G
Sbjct: 198 GEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSP-----SLIEALDNQKVEFLACGGS 252
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HSA++T++ + T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 253 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGNRVTQIA--CGRWHTLA 308
>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
Length = 1061
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 72/367 (19%)
Query: 54 DELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113
D L P+ L + + V +ACG H +T G+VF+WG S G+LGHG D +
Sbjct: 265 DVLLPRPLESNVVLDVHHIACGVRHAAMVTR-----QGEVFTWGEESGGRLGHGAGKDVI 319
Query: 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS 173
P + ++ G H+ V+ G LFT GDGTFG LGHG+ + + P +V
Sbjct: 320 QPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLFTFGDGTFGVLGHGNRENVAYPREVE 379
Query: 174 SFVNKNVHQIACGMRHSLVLLKDCLGN--------QVYGFGSGKRGQLGVSKDRIRSVSL 225
S +ACG+ H+ +++ + +++ +G G + +LG
Sbjct: 380 SLAGLRTIAVACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLG----------- 428
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAA 285
+GD+ L P +P+ + ++
Sbjct: 429 -----------------HGDKEPRLE--------------------PTCVPALIDYNFHK 451
Query: 286 LGWNHVLV--LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA 343
+ H L LT G V +G + +G L +P + + +E L G V +IA
Sbjct: 452 IACGHSLTVGLTTAGHVFTMGSTVYGQLGNP---CADGKVPCLVE--DKLYGESVEEIAC 506
Query: 344 GAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGF 403
GA H A +T + TWG G +G+LG G+ D+ P +V + ++R + + CG+ +
Sbjct: 507 GAYHVAALTSRNEVYTWGKGANGRLGHGDGEDRKTPTIV---EALKDRHVKY-IACGANY 562
Query: 404 TYAISRH 410
+ AI H
Sbjct: 563 SAAICFH 569
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLS--SVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG + G+LG G D + P L L V+ + CG H +TS G+
Sbjct: 298 EVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVTS-----MGQ 352
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS---------- 142
+F++G G+ G LGHG + YP+ V G R TI W+ + V
Sbjct: 353 LFTFGDGTFGVLGHGNRENVAYPREVESLAGLR-TIAVACGVWHTAAVVEVIVTQSSSSA 411
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
SG LFT GDG +LGHGD P V + ++ N H+IACG HSL + G+ V
Sbjct: 412 SSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACG--HSLTVGLTTAGH-V 468
Query: 203 YGFGSGKRGQLG----------VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ GS GQLG + +D++ S+ ++ G + + AAL++
Sbjct: 469 FTMGSTVYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHV------------AALTS 516
Query: 253 EGHLYTWGRGFN 264
+YTWG+G N
Sbjct: 517 RNEVYTWGKGAN 528
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 174/404 (43%), Gaps = 35/404 (8%)
Query: 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALT 83
+E+ + KV WG QLG + P + LS L + + GG+ L +
Sbjct: 2898 DEQSSNEISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHI--SGGSKSLFIV 2955
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
S GK+++ G G++G+LG G + P+ V + + + +G H+ ++
Sbjct: 2956 SQD----GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTL 3011
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G +F+ G+G G+LGHG+ + P + S K + IACG HS + ++Y
Sbjct: 3012 DGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITS---SGELY 3068
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA---ALSAEGHLYTW- 259
+G G+ G+LG D + P++ L +V + A G R A L+ EG +++W
Sbjct: 3069 TWGLGEYGRLG-HGDNCTQLK-PKLVTALQGHRVVQV-ACGSRDAQTLCLTEEGLVFSWG 3125
Query: 260 -------GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
GRG + V + + Q G L LT GEV G + L
Sbjct: 3126 DGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLG 3185
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+P + L G KVI +A GA H VT++ + WG +HGQ G GN
Sbjct: 3186 HGTDQHVRKP-----TPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGN 3240
Query: 373 TCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPSQ 415
T P V+ L F NR V CGS + A S PS+
Sbjct: 3241 TVVNKKPNLVLGLDGVFVNR-----VACGSSHSVAWSLPQNPSE 3279
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWGAG G+LG G + P + L V+ + G ++ A++S G++F
Sbjct: 599 EVYSWGAGEGGRLGHGDTASKEVPTKIALEK--QVTAIYAGASYSAAVSSV-----GELF 651
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WGRG+ G+LGHG D P V ++ + +G HS V+D G LF GDG
Sbjct: 652 TWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGD 711
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
FG+LG+G PV++ +V +I G + S+ L D +Y +G G G+LG
Sbjct: 712 FGKLGNGSCNGSPLPVQIEGV--SSVARIYSGSQFSVALSYD---GTLYSWGKGHGGRLG 766
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
+V P++ L +IV ++ AL++ G LY WGR
Sbjct: 767 HGNSEHSNV--PKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGR 811
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 136/319 (42%), Gaps = 69/319 (21%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+ ++P+L+ L +S + + A C G H +AL+S G+V+SWG G G+LGHG+
Sbjct: 564 ETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSS-----AGEVYSWGAGEGGRLGHGDTAS 618
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
P + +T I AG ++S VS G LFT G GT+G+LGHG+ P +
Sbjct: 619 KEVPTKIAL----EKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQ 674
Query: 172 VSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
V + V +A G HS+ + G ++ +G G G+LG LP
Sbjct: 675 VQALKAYKVVDVALGSGDAHSMAVTD---GGLLFAWGDGDFGKLG--NGSCNGSPLPVQI 729
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN 289
G+ + I + S ALS +G LY+WG+
Sbjct: 730 EGVSSV--ARIYSGSQFSVALSYDGTLYSWGK---------------------------- 759
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
G G L G S H + P+ V + L+G K++ +A G+ H
Sbjct: 760 ------GHGGRLGHGNSEHSNV--PKLVHA-------------LEGKKIVDVAVGSAHCL 798
Query: 350 VVTENRAIMTWGWGEHGQL 368
+T + + WG ++ Q+
Sbjct: 799 ALTSSGELYGWGRNDYQQI 817
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 104/248 (41%), Gaps = 41/248 (16%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G DG+LG G P+L+ S V +ACG AH +TS G V
Sbjct: 4051 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITS-----QGHVL 4105
Query: 95 SWGRGSSGQLGHGEMVDALYPK-------------------------------PVTFFDG 123
+WG+G G+LGHG+ D L PK P+
Sbjct: 4106 TWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESL 4165
Query: 124 HRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183
+ + G S ++ SG ++T G G + +LGHG+ P KV++ K + I
Sbjct: 4166 AGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISI 4225
Query: 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
A G H V D +V+ +G GQLG + ++ P++ L IV +
Sbjct: 4226 ATGSLHC-VACSD--SGEVFTWGDNDEGQLG--DGTVTAIQRPRLVQSLQGKHIVKVICG 4280
Query: 244 GDRSAALS 251
+ ALS
Sbjct: 4281 SAHTLALS 4288
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 33/286 (11%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+++G H +S G +F+ G+G G+LGHG+ S+ P + + V IACG HS
Sbjct: 4036 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHS 4095
Query: 191 LVLLKDCLGNQ--VYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
C+ +Q V +G G+ G+L G S+D+++ T + + + I A+
Sbjct: 4096 A-----CITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAE 4150
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
+ A + V C +L+ S + W G G+ LG
Sbjct: 4151 EVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTW-------GKGDYHRLG-- 4201
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
HG +D R RP +KV+ L G K+I IA G+ H +++ + TWG + G
Sbjct: 4202 -HGN-TDHVR----RP-----KKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEG 4250
Query: 367 QLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCL 412
QLG G P++V Q + ++V CGS T A+S + L
Sbjct: 4251 QLGDGTVTAIQRPRLVQ---SLQGKHI-VKVICGSAHTLALSTYQL 4292
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
++G+G RGQLG + RI+ + + L I+I G G+++ A++ +G LY
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAG----GEQTLYAVTPDGKLYAT 4001
Query: 260 G------RGFNSTSDVNCPQSLPSSLS---FSQAAL--GWNHVLVLTGDGEVLMLGGSHH 308
G G T V+ P +L SL + A+ G H L L+ DGEV G
Sbjct: 4002 GYGAGGRLGIGGTDSVSTP-TLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGED 4060
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L R S RP + + L G+ V+ IA G+ HSA +T ++TWG G +G+L
Sbjct: 4061 GKLGHGNRDSYDRP-----KLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRL 4115
Query: 369 GLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
G G++ DQ+ PK L R T + CG G T
Sbjct: 4116 GHGDSEDQLQPKRCVL------RTT---IMCGVGVT 4142
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 56/292 (19%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+VFSWG G G+LGHG PK + G + I+ G
Sbjct: 4039 GGKHCLALSS-----DGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSG--IGVVDIACG 4091
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP------------VKVSSFVNKNVHQ 182
HS ++ G + T G G +G+LGHGD P V V++ + +
Sbjct: 4092 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEE 4151
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
+ G R S + ++ G V G Q V+ R SV T G D +
Sbjct: 4152 VPMGAR-SPMKIESLAGLGVIKVECG--SQFSVALTRSGSV----YTWGKGDYHRL---- 4200
Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEV 300
G +T V P+ + + A G H + + GEV
Sbjct: 4201 -------------------GHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEV 4241
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
G + G L D + RP V +L G ++++ G+ H+ ++
Sbjct: 4242 FTWGDNDEGQLGDGTVTAIQRP-----RLVQSLQGKHIVKVICGSAHTLALS 4288
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 44/252 (17%)
Query: 154 TFGQLGHGDYRSHSS------PVKVSSFVNKNVHQIA--CGMRHSLVLLKDCLGNQVYGF 205
T GQL Y HSS P V +V QIA C RH++ L +VY +
Sbjct: 551 TSGQL----YSIHSSCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSS---AGEVYSW 603
Query: 206 GSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G+G+ G+LG SK+ ++L + ++ I A SAA+S+ G L+TWGR
Sbjct: 604 GAGEGGRLGHGDTASKEVPTKIALEK--------QVTAIYAGASYSAAVSSVGELFTWGR 655
Query: 262 G------FNSTSDVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLGGSHHGML 311
G ++ D P + + ++ ALG H + +T G + G G L
Sbjct: 656 GTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKL 715
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ S PL V +E VS+ V +I +G++ S ++ + + +WG G G+LG G
Sbjct: 716 GNGSCNGS--PLPVQIEGVSS-----VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHG 768
Query: 372 NTCDQIHPKVVN 383
N+ PK+V+
Sbjct: 769 NSEHSNVPKLVH 780
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
H + L+ GEV G G L + S P +ALEK +V I AGA +S
Sbjct: 589 RHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEK-------QVTAIYAGASYS 641
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
A V+ + TWG G +G+LG GN+ D+ P V ++ D L GSG ++++
Sbjct: 642 AAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVAL----GSGDAHSMA 697
>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 560
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 157/380 (41%), Gaps = 38/380 (10%)
Query: 21 KPKIEEEEEEQQVVKV---WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGA 77
P + + V +WG GQLG G D P ++L + +V+ +A G A
Sbjct: 40 SPVVAQNGPSPSAVAADTALAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAA 99
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
H LA+TS G + +WG SSGQLG G + P V G T A H
Sbjct: 100 HNLAVTS-----AGTILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGA--AH 152
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
S ++ +G + G T GQLG G +PV V+ +A G HSL +
Sbjct: 153 SLALTSAGTVLAWGANTIGQLGDGTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTS-- 210
Query: 198 LGNQVYGFGSGKRGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSA 252
V +G GQLG + VSLP G+ + G GD S A+++
Sbjct: 211 -AGTVLAWGDNASGQLGEGTTIPSRTPVVVSLPS---GVTATAVAG----GDLHSLAVTS 262
Query: 253 EGHLYTWGR------GFNSTSDVNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
G + WG G +T+D + P SL + + A G L L+ G VL G
Sbjct: 263 AGAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWG 322
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
+ G L D + P++ VS+ G V IA G H VT A + WG
Sbjct: 323 SNSSGQLGDGTTADRSTPVT-----VSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNS 377
Query: 365 HGQLGLGNTCDQIHPKVVNL 384
GQLG G D++ P V+L
Sbjct: 378 FGQLGDGTNTDRVTPVAVSL 397
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 146/326 (44%), Gaps = 26/326 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +WG + GQLG G + +P + L + +V+ +A G AH LALTS G V
Sbjct: 109 TILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTS-----AGTVL 163
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQLG G +D+ P PV T T ++AG HS V+ +G + GD
Sbjct: 164 AWGANTIGQLGDGTTIDS--PAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNA 221
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G +PV VS +A G HSL + V +GS GQLG
Sbjct: 222 SGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTS---AGAVLAWGSNSSGQLG 278
Query: 215 VSKDRIRSVSLPQVTIGLH-DIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
RS V + L + ++A S ALS+ G + WG G +T+
Sbjct: 279 DGTTADRST---PVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDGTTA 335
Query: 268 DVNCPQSL--PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
D + P ++ P+ + + A G H L +T G + G + G L D P++V
Sbjct: 336 DRSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAV 395
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVV 351
+L + + IAAGA HS V
Sbjct: 396 SLP----VGTTTLTAIAAGAAHSVAV 417
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 111/267 (41%), Gaps = 24/267 (8%)
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GD GQLG G S PV VS V +A G H+L + + +G
Sbjct: 62 GDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTS---AGTILAWGDNSS 118
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWGR------GF 263
GQLG D S V +GL V A G S AL++ G + WG G
Sbjct: 119 GQLG---DGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANTIGQLGD 175
Query: 264 NSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
+T D P +LP ++ + A G H L +T G VL G + G L + + S
Sbjct: 176 GTTIDSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEGTTIPSRT 235
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKV 381
P+ V+L GV +A G HS VT A++ WG GQLG G T D+ P
Sbjct: 236 PVVVSLPS-----GVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTADRSTPVA 290
Query: 382 VNLGDEFQNRDTQLEVFCGSGFTYAIS 408
V+L T V G F+ A+S
Sbjct: 291 VSL----SGGTTVTAVAAGIAFSLALS 313
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G GQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDD 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ +H T + E++M+ G + +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T +S G H+ V+ + L+ G +GQLG G + S P V + + V ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV + G +VY G GQLG+ RS + ++ +I +SA + SA
Sbjct: 98 HTLVSTE---GGKVYAAGGNNEGQLGLGDTEERS-TFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL+ +G L+ WG G + ++V PQ + S + G+ H +T +G++
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L P ++ + + V + G KV+Q+A G H+ V+TE +A+ T+G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMP---QPVPGIPG-KVVQVACGGGHTVVLTE-KAVYTFGL 268
Query: 363 GEHGQLGLG 371
G+ GQLGLG
Sbjct: 269 GQFGQLGLG 277
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + Q+Y FG + G+LG
Sbjct: 169 EGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GQLYTFGEPECGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS------ 267
+ + + +PQ G+ ++V ++ G + L+ E +YT+G G F
Sbjct: 224 LPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 281
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ + P+++ S A G NH ++T G + G HG L
Sbjct: 282 ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKL 327
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 153/333 (45%), Gaps = 49/333 (14%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--------VDALYPKPVTFF 121
+ L+CG H +T K++ +G + GQLG G V AL P+ V F
Sbjct: 38 TFLSCGDEHTAVVTG-----NNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF- 91
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNV 180
+ G NH+ ++ G ++ G GQLG GD S+ +S F + + +
Sbjct: 92 ---------AACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKI 142
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVG 239
Q++ G S L +D +++ +G GQ+G+ + + +V +PQ VT+G I
Sbjct: 143 KQLSAGSNTSAALTED---GELFMWGDNSEGQIGL--ENVTNVCVPQQVTVGK---PISW 194
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSL-SFSQAALGWNH 290
IS SA ++ EG LYT+G G + VN PQ +P Q A G H
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+VLT + V G G L + T + A+E + + K+ IA G H+A+
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQ---KISFIACGENHTAL 309
Query: 351 VTENRAIMTWGWGEHGQLGLG--NTCDQIHPKV 381
+T+ + T+G G HG+LGLG N+ +Q P +
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYT 127
V +ACGG H + LT + V+++G G GQLG G + + PK + +
Sbjct: 245 VVQVACGGGHTVVLTEKA------VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK-- 296
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIAC 185
I+ I+ G NH+ ++D G ++T GDG G+LG G S + P S+F+ V ++C
Sbjct: 297 ISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSC 356
Query: 186 GMRHSLVLLKDCLG 199
G H+LV LG
Sbjct: 357 GGCHTLVFATPRLG 370
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 240 ISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALGWN 289
+S + +A ++ LY WG+ G S S V+ P + P + F AA G N
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF--AACGRN 97
Query: 290 HVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H LV T G+V GG++ G L D E S+ +S + K+ Q++AG+
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR------KIKQLSAGSNT 151
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
SA +TE+ + WG GQ+GL N + P+ V +G
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 135/287 (47%), Gaps = 22/287 (7%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ + + LF G +GQLG G + + P + + + V +ACG H+
Sbjct: 66 LSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHT 125
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LVL G +VY G GQLG+ RS + ++ +I +SA + SAAL
Sbjct: 126 LVLTG---GGKVYATGGNNEGQLGLGDTDERS-AFHLISFFTSQHKIKQLSAGSNTSAAL 181
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
+ +G L+ WG G + +++ P + S + G+ H +T +GE+ G
Sbjct: 182 TEDGELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISWISCGYYHSAFVTTEGELYTFG 241
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
G L P ++ + + +S KVIQ+A G H+ V+TE +A+ T+G G+
Sbjct: 242 EPESGKLGLPPKLLVNHKVPQLVPGISE----KVIQVACGGGHTVVLTE-KAVYTFGLGQ 296
Query: 365 HGQLGLGN-TCDQIHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAISR 409
GQLGLG T + PKV+ +D ++ V CG T I+
Sbjct: 297 FGQLGLGTFTFETSEPKVIE-----SVKDKKISHVCCGENHTALITE 338
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 63/347 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V +ACG H L LT GGKV+
Sbjct: 81 KLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLVLTG-----GGKVY 135
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF ++ I +SAG N S +++ G LF GD +
Sbjct: 136 ATGGNNEGQLGLGDTDERSAFHLISFFTS-QHKIKQLSAGSNTSAALTEDGELFMWGDNS 194
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + ++Y FG + G+LG
Sbjct: 195 EGQIGLQNITNMCVPHQVT--VGKPISWISCGYYHSAFVTTE---GELYTFGEPESGKLG 249
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + +PQ+ G+ + +++ ++ G + L+ E +YT+G G
Sbjct: 250 LPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLT-EKAVYTFGLG------------ 295
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG T + S+P+ + S +
Sbjct: 296 -----QFGQLGLG-----TFTFE-------------TSEPKVIESVK------------- 319
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
K+ + G H+A++TE+ + T+G G HG+LGLG N +Q P
Sbjct: 320 DKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLP 366
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 35 KVWSWGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G G+LG L + PQL+ S V +ACGG H + LT +
Sbjct: 236 ELYTFGEPESGKLGLPPKLLVNHKVPQLVPGIS-EKVIQVACGGGHTVVLTEKA------ 288
Query: 93 VFSWGRGSSGQLGHGEMV-DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + PK + + I+H+ G NH+ +++SG L+T G
Sbjct: 289 VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKK--ISHVCCGENHTALITESGLLYTFG 346
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
DG G+LG G ++ + P S+F+ VH +ACG H LV LG
Sbjct: 347 DGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHMLVFATPRLG 396
>gi|386849808|ref|YP_006267821.1| Protein sidekick-2 [Actinoplanes sp. SE50/110]
gi|359837312|gb|AEV85753.1| Protein sidekick-2 [Actinoplanes sp. SE50/110]
Length = 1150
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 139/323 (43%), Gaps = 29/323 (8%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRY 126
S V LA G H AL S + + WGRG+ GQLG G V PV H
Sbjct: 34 SRVVQLAAGNGHTCALLSDTGA-----YCWGRGAEGQLGDGSTV--YRSGPVAIAAPHGV 86
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
+ T ++AG H+ V + + G G +GQLG G + SSPV V+ ++A G
Sbjct: 87 SFTQLTAGQAHTCGVGSNAKAYCWGMGDYGQLGDGATANRSSPVAVAGPAGVGFTELAAG 146
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
RH+ L D + Y +G G GQLG RS + T + ++A
Sbjct: 147 DRHTCALGSD---TRTYCWGIGNDGQLGDGATANRSSPVEVAT--PPGVSFTELAAGVYH 201
Query: 247 SAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTG 296
+ AL+++ Y WG G N +S V + P ++F+Q A G H L
Sbjct: 202 TCALASDTGTYCWGMGGMGQLGDGGTVNRSSPVAV--AAPPGVTFTQLAAGGFHTCGLGS 259
Query: 297 DGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
D G G L D +RP+ VA+ GV ++ AG+ H+ + +
Sbjct: 260 DTRTYCWGLDETGQLGDGGTARWSRPVEVAVPA-----GVTFTRLTAGSNHTCALGSDTR 314
Query: 357 IMTWGWGEHGQLGLGNTCDQIHP 379
WG+G +GQ+G G T ++ P
Sbjct: 315 TYCWGYGYYGQVGDGGTVNRSSP 337
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 25/351 (7%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+ WG G +GQLG G P + S + L G AH + S K + W
Sbjct: 56 YCWGRGAEGQLGDGSTVYRSGPVAIAAPHGVSFTQLTAGQAHTCGVGS-----NAKAYCW 110
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G G GQLG G + P V G +T ++AG H+ + + G G G
Sbjct: 111 GMGDYGQLGDGATANRSSPVAVAGPAGVGFT--ELAAGDRHTCALGSDTRTYCWGIGNDG 168
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
QLG G + SSPV+V++ + ++A G+ H+ L D G +G G + G +
Sbjct: 169 QLGDGATANRSSPVEVATPPGVSFTELAAGVYHTCALASD-TGTYCWGMGGMGQLGDGGT 227
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVN 270
+R S P + ++A G + L ++ Y WG G T+ +
Sbjct: 228 VNR----SSPVAVAAPPGVTFTQLAAGGFHTCGLGSDTRTYCWGLDETGQLGDGGTARWS 283
Query: 271 CPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
P ++P+ ++F++ G NH L D G ++G + D V+ + P+ VA+
Sbjct: 284 RPVEVAVPAGVTFTRLTAGSNHTCALGSDTRTYCWGYGYYGQVGDGGTVNRSSPVEVAVP 343
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
GV + ++ AG H+ + + + WG E GQLG G+ D+ P
Sbjct: 344 A-----GVTLSRLTAGWYHTCALGSDSTVYCWGLNETGQLGDGSITDRSSP 389
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K + WG G GQLG G + SP + + + LA G H AL S + + +
Sbjct: 106 KAYCWGMGDYGQLGDGATANRSSPVAVAGPAGVGFTELAAGDRHTCALGSDT-----RTY 160
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDG 153
WG G+ GQLG G + P V G + T ++AG H+ SD+G + G G
Sbjct: 161 CWGIGNDGQLGDGATANRSSPVEVATPPGVSF--TELAAGVYHTCALASDTG-TYCWGMG 217
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLG G + SSPV V++ Q+A G H+ L D + Y +G + GQL
Sbjct: 218 GMGQLGDGGTVNRSSPVAVAAPPGVTFTQLAAGGFHTCGLGSD---TRTYCWGLDETGQL 274
Query: 214 G----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------ 263
G R V++P + ++A + + AL ++ Y WG G+
Sbjct: 275 GDGGTARWSRPVEVAVPA------GVTFTRLTAGSNHTCALGSDTRTYCWGYGYYGQVGD 328
Query: 264 ----NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
N +S V ++P+ ++ S+ GW H L D V G + G L D
Sbjct: 329 GGTVNRSSPVEV--AVPAGVTLSRLTAGWYHTCALGSDSTVYCWGLNETGQLGD 380
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 107/268 (39%), Gaps = 55/268 (20%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLAL----------- 82
+ + WG G DGQLG G + SP + S + LA G H AL
Sbjct: 157 TRTYCWGIGNDGQLGDGATANRSSPVEVATPPGVSFTELAAGVYHTCALASDTGTYCWGM 216
Query: 83 --------------TSPSSVI------------GG----------KVFSWGRGSSGQLGH 106
+SP +V GG + + WG +GQLG
Sbjct: 217 GGMGQLGDGGTVNRSSPVAVAAPPGVTFTQLAAGGFHTCGLGSDTRTYCWGLDETGQLGD 276
Query: 107 GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSH 166
G A + +PV T T ++AG NH+ + + G G +GQ+G G +
Sbjct: 277 GGT--ARWSRPVEVAVPAGVTFTRLTAGSNHTCALGSDTRTYCWGYGYYGQVGDGGTVNR 334
Query: 167 SSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK--DRIRSVS 224
SSPV+V+ + ++ G H+ L D + VY +G + GQLG DR V
Sbjct: 335 SSPVEVAVPAGVTLSRLTAGWYHTCALGSD---STVYCWGLNETGQLGDGSITDRSSPVG 391
Query: 225 LPQVTIGLHDIEIVGISAN-GDRSAALS 251
+P + + G+SA GDR A+S
Sbjct: 392 MPPLPSPAGPLPPTGVSATAGDREIAVS 419
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
Q A G H L D G G L D V + P+++A GV Q+
Sbjct: 38 QLAAGNGHTCALLSDTGAYCWGRGAEGQLGDGSTVYRSGPVAIAAPH-----GVSFTQLT 92
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
AG H+ V N WG G++GQLG G T ++ P V
Sbjct: 93 AGQAHTCGVGSNAKAYCWGMGDYGQLGDGATANRSSPVAV 132
>gi|255569510|ref|XP_002525722.1| conserved hypothetical protein [Ricinus communis]
gi|223535022|gb|EEF36705.1| conserved hypothetical protein [Ricinus communis]
Length = 1050
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 45/356 (12%)
Query: 33 VVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V+SWG+G + QLGTG H + P ++ S + +++ H +A+++ G+
Sbjct: 153 TTEVFSWGSGANYQLGTGNAHLQKLPCKVDALHSSLIKLVSAAKFHSIAVSA-----HGE 207
Query: 93 VFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
V++WG G G+LGH + + P+ +T G R + I+A +H+ ++SG
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQLTSGLGSRR-VKAIAAAKHHTVLATESGE 266
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+FT G GQLG+ + +P +VSS ++ + +A +H+ V+ +V+ +G
Sbjct: 267 VFTWGSNREGQLGYT-VDTQPTPRRVSSLKSRII-AVAAANKHTAVV---SDSGEVFTWG 321
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST 266
K GQLG S P+V L G++A + L A+G +YTWG +
Sbjct: 322 CNKEGQLGYGTSNSASNYTPRVVEYLKGKTFKGVAAAKYHTIVLGADGEVYTWGHRLVTP 381
Query: 267 SDV----NCPQSLPSSLSF--------SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
V N +S S L F + A G H L LT DG + + + SDP
Sbjct: 382 RRVVIARNLKKSGNSPLKFHRMERLHVASIAAGMVHSLALTDDGALF------YWVSSDP 435
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
+ + +++ +L G KV+ I+AG +AVVT + W G+ G+ L
Sbjct: 436 D---------LRCQQLYSLCGKKVVSISAGKYWNAVVTALGDVYMWD-GKEGKDKL 481
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D + +V+ +GSG QLG ++ LP LH I +SA S A+SA G
Sbjct: 150 DSVTTEVFSWGSGANYQLGTGNAHLQK--LPCKVDALHSSLIKLVSAAKFHSIAVSAHGE 207
Query: 256 LYTWGRG------------FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEV 300
+YTWG G + + V P+ L S L A +H ++ T GEV
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQLTSGLGSRRVKAIAAAKHHTVLATESGEV 267
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + G L T+P +VS+L ++I +AA +H+AVV+++ + TW
Sbjct: 268 FTWGSNREGQLG---YTVDTQPTP---RRVSSLKS-RIIAVAAANKHTAVVSDSGEVFTW 320
Query: 361 GWGEHGQLGLG--NTCDQIHPKVV 382
G + GQLG G N+ P+VV
Sbjct: 321 GCNKEGQLGYGTSNSASNYTPRVV 344
>gi|292628008|ref|XP_694032.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Danio rerio]
Length = 448
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 181/408 (44%), Gaps = 46/408 (11%)
Query: 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLA 81
+E ++ + V +++WGA + GQLG G D+ P+ S L + A GG H A
Sbjct: 52 MEGDQLSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRAE-SGLQEEQIRAVTGGGGHS-A 109
Query: 82 LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK--PVTFFDGHRYTITHISAGWNHSG 139
L S S G++ G+ GQLG G ++ + + P+ F + +S GW+ +
Sbjct: 110 LISDS----GELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFG----RVQQVSCGWDFTI 161
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCL 198
++ G + CG FGQLG ++HS+ P+ + SF ++ V +A G+RH+L
Sbjct: 162 ILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSF-HEPVTSVAAGLRHALA---STA 217
Query: 199 GNQVYGFGSG-----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE 253
VY +G+G KR S P + G + + A A L+
Sbjct: 218 SGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVN 277
Query: 254 GHLYTWGRG-----FNSTSDVNCPQSLPSSL----SFSQAALGWNHVLVLTGDGEVLMLG 304
G ++ WG + + + P +L S+ S GW H++ T G V G
Sbjct: 278 GDVFLWGSNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWG 337
Query: 305 GSHHGMLSDP----ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
S++G L E+ SS L + +V L G QI+ G+EH+ V R + +W
Sbjct: 338 RSNYGQLGQTDHSMEKQSSDEHLVRSPVEVKALFGAT--QISCGSEHNLAVVGGR-VFSW 394
Query: 361 GWGEHGQLGLGNTCDQIHPK-VVNLGDEFQNRDTQLEVFCGSGFTYAI 407
GW EHG G G+ D P+ + L D L + CG+G + A+
Sbjct: 395 GWNEHGMCGDGSLQDITQPQPIPALADA-----VALLIGCGAGHSMAL 437
>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 11/226 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G T GQLG G D +P+++ + LSSV +A G +++L++T G V+S
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEV--LSSVVQIAAGPSYILSVTE-----NGTVYS 289
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G++ LGHGE D L P+ + F I +SAG H+ + +G ++T G G
Sbjct: 290 FGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC 349
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LGHGD ++P ++S N+ V Q+ R + VL+ VYGFGS G LG
Sbjct: 350 GALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDS---GSVYGFGSMGFGSLGF 406
Query: 216 SKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
R+ L P++ L + IS + +++ G ++ +G
Sbjct: 407 LDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFG 452
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 157/363 (43%), Gaps = 28/363 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+S G+G G LG G + ++ ++ L+ V ++ H + G+VF
Sbjct: 131 VYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ-----SGEVF 185
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ G SS GH + ++ P+ V G ++AG N + F++ G ++TCG
Sbjct: 186 TCGDNSSSCCGHRDTTRPIFRPRLVESLKG--IPCKQVAAGLNFTVFLTRKGHVYTCGTN 243
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
T GQLGHGD + +P + V +V QIA G + L + ++ VY FGSG L
Sbjct: 244 THGQLGHGDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTEN---GTVYSFGSGANFCL 298
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NS 265
G D ++ ++ + I IV +SA + + AL + G++YTWG+G+
Sbjct: 299 GHGEQHDELQPRAIQKFR--RKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGD 356
Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ P+ L S + Q VL G V G G L +R S + L
Sbjct: 357 EIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVL 416
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ + L V QI+ G H+ V+T I +G E QLG + P +
Sbjct: 417 KPRI--LDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEIF 474
Query: 384 LGD 386
+ D
Sbjct: 475 IKD 477
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 22/255 (8%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G V++ G + GQLGHG+ D PK + ++ I+AG ++ V+++G +++
Sbjct: 235 GHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS----SVVQIAAGPSYILSVTENGTVYSF 290
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH--QIACGMRHSLVLLKDCLGNQVYGFGSG 208
G G LGHG+ P + F K +H +++ G H++ L + VY +G G
Sbjct: 291 GSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSN---GYVYTWGKG 347
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-GFNS-- 265
G LG D I + P++ L + +V + A ++ L G +Y +G GF S
Sbjct: 348 YCGALG-HGDEIEKTT-PELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLG 405
Query: 266 ------TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
+ V P+ L + + SQ + G H +V+T G++ G + L
Sbjct: 406 FLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLR 465
Query: 318 SSTRPLSVALEKVSN 332
S P + ++ VS
Sbjct: 466 SCLEPTEIFIKDVSE 480
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 105 bits (262), Expect = 5e-20, Method: Composition-based stats.
Identities = 99/380 (26%), Positives = 157/380 (41%), Gaps = 80/380 (21%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V+S G+ T+GQLG G + ++ SP L+ +ACG H L T G V
Sbjct: 137 VYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTER-----GDV 191
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYT---ITHISAGWNHSGFVSDSGCLFTC 150
+SWG+G G LG G + D PK + T + +SAG S + SG ++TC
Sbjct: 192 YSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTC 251
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLG G + P+ + F + V IACG H L+L K VY G+
Sbjct: 252 GQNDAGQLGIGGRDQENIPISIKKFPER-VSMIACGQMHLLMLTKQ---GTVYSCGANSF 307
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGRGFNSTSDV 269
GQLG++ R+ S P + + I + ++A G SA++S + G LY W
Sbjct: 308 GQLGLNNK--RNSSSPLLIQDISHIPMRYVAA-GSFSASISYDSGDLYLW---------- 354
Query: 270 NCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
G G P RV + + ++V+
Sbjct: 355 ----------------------------------GSGVFGEFLTPHRVKTIKGMTVS--- 377
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQ 389
++ G V ++ + +WG G+LG G+ ++ P+++N +
Sbjct: 378 -----------VSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTPQIIN---QLN 423
Query: 390 NRDTQLEVFCGSGFTYAISR 409
++ L V CG F+ A+ +
Sbjct: 424 DKIVTL-VSCGRNFSIALGQ 442
Score = 97.1 bits (240), Expect = 1e-17, Method: Composition-based stats.
Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 92 KVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
++FSWG +GQLG G+ + YP P + + I ++S G H+ F++ +++
Sbjct: 83 EIFSWGSDQAGQLGLGQSQIGKSYPVPR--YCTYNIGIKYVSCGDEHAAFITTGNMVYSM 140
Query: 151 GDGTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G T GQLG GD + +SP+ V + +++ IACG H+LV + VY +G G
Sbjct: 141 GSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTER---GDVYSWGQG 197
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHD-----IEIVGISANGDRSAALSAEGHLYTWGR-- 261
G LG + LP++ HD +++ +SA SA L G +YT G+
Sbjct: 198 IFGALGAGN--LDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQND 255
Query: 262 ----GFNSTSDVNCPQSLPS-SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
G N P S+ S A G H+L+LT G V G + G L +
Sbjct: 256 AGQLGIGGRDQENIPISIKKFPERVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNK 315
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+S+ PL + ++ + + +AAG+ +++ ++ + WG G G+
Sbjct: 316 RNSSSPL-----LIQDISHIPMRYVAAGSFSASISYDSGDLYLWGSGVFGEF 362
Score = 72.8 bits (177), Expect = 3e-10, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 27/252 (10%)
Query: 147 LFTCGDGTFGQLGHGDYR-SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+F+ G GQLG G + S PV N + ++CG H+ + GN VY
Sbjct: 84 IFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITT---GNMVYSM 140
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN 264
GS GQLGV ++ + P + L D + + I+ + + + G +Y+WG+G F
Sbjct: 141 GSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQGIFG 200
Query: 265 STSDVNC-PQSLPSSLSFS-----------QAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
+ N Q LP + S Q + G +L G V G + G L
Sbjct: 201 ALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAGQLG 260
Query: 313 DPERVSSTRPLSVAL--EKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
R P+S+ E+VS IA G H ++T+ + + G GQLGL
Sbjct: 261 IGGRDQENIPISIKKFPERVS--------MIACGQMHLLMLTKQGTVYSCGANSFGQLGL 312
Query: 371 GNTCDQIHPKVV 382
N + P ++
Sbjct: 313 NNKRNSSSPLLI 324
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 4/134 (2%)
Query: 272 PQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
P+ ++ + G H +T V +G + +G L + + + +E +
Sbjct: 109 PRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALM 168
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG-DEFQN 390
+ K I IA GA H+ V TE + +WG G G LG GN DQ PK++++ D+
Sbjct: 169 DQ---KPISIACGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLST 225
Query: 391 RDTQLEVFCGSGFT 404
+ ++V G F+
Sbjct: 226 KSQMIQVSAGMRFS 239
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 93
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 94 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 151
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
++GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 152 SYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 209
Query: 214 G 214
G
Sbjct: 210 G 210
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPK 116
P+L+ + ++ ++CG H LAL S G+ F+WG+ S GQLG G E P+
Sbjct: 10 PRLIQKLNQQTILQVSCGNWHCLALAS-----DGQFFTWGKNSHGQLGLGKEFPSQASPQ 64
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV 176
V +G + ++AG HS +S SG +F G GQLG D + SP V
Sbjct: 65 RVRSLEG--IPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 122
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
+ V I+CG H+ VL K V+ FG+G GQLG D + P+ + L E
Sbjct: 123 TQKVVYISCGEEHTAVLTK---SGGVFTFGAGSYGQLG--HDSMNDEVNPRRVLELMGSE 177
Query: 237 IVGISANGDRSAAL-SAEGHLYTWG------RGFNSTSDVNCP 272
+ I+ + A + G +Y +G G T +V CP
Sbjct: 178 VTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCP 220
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 96/228 (42%), Gaps = 18/228 (7%)
Query: 165 SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVS 224
S + P + + + Q++CG H L L D Q + +G GQLG+ K+ S +
Sbjct: 6 SVAVPRLIQKLNQQTILQVSCGNWHCLALASD---GQFFTWGKNSHGQLGLGKE-FPSQA 61
Query: 225 LPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCP--QSLP 276
PQ L I + ++A G S ALS G ++ WG G + D P L
Sbjct: 62 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 121
Query: 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336
+ + G H VLT G V G +G L P +V L G
Sbjct: 122 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNP-----RRVLELMGS 176
Query: 337 KVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 177 EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 147
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 148 FGAGSYGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 205
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + GQL
Sbjct: 206 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 235
Query: 215 VSKDRIRSVSLPQVTIG 231
DR + + Q+ G
Sbjct: 236 ARADRFKYHIVKQIFSG 252
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
Q + G H L L DG+ G + HG L + P + ++V +L+G+ + Q+A
Sbjct: 23 QVSCGNWHCLALASDGQFFTWGKNSHGQLG----LGKEFPSQASPQRVRSLEGIPLAQVA 78
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
AG HS ++ + A+ WG GQLGL + D+ P V L
Sbjct: 79 AGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL 120
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G +GQLG G + +P ++ V + CG H + + + GG+++
Sbjct: 101 RVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIV-----LAGGELY 155
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G +GQ G G D L P+ V G + H S G H+ V+ G +FT G G+
Sbjct: 156 TCGWNKNGQCGVGSTSDLLSPQCVESLRGE--GVQHASCGAGHTAVVTGGGEVFTFGSGS 213
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLGHGD + S P +V + V + +ACG +++ D ++V+GFG GQLG
Sbjct: 214 CGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFD---HRVFGFGLNNVGQLG 270
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S +S P+ L + E+ N AL+ G L WG
Sbjct: 271 ASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 32/306 (10%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG-GKVFSWGRGSSGQLGHGEMVDALYP 115
+P++L + V +ACG L + V+G G+V WG GQ G G +P
Sbjct: 19 TPRMLKKAMGRQVRDVACG------LVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHP 72
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
V G +S G H+ VS+ G +F+ G G GQLGHG + ++P V +
Sbjct: 73 TFVGSLFG--VACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAM 130
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
++V + CG+ H++++L G ++Y G K GQ GV + PQ L
Sbjct: 131 RGRDVLAVTCGVGHTVIVLA---GGELYTCGWNKNGQCGVGS--TSDLLSPQCVESLRGE 185
Query: 236 EIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALG 287
+ S +A ++ G ++T+G G D++ P+ + + + S A G
Sbjct: 186 GVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACG 245
Query: 288 WNHVLVLTGDGEVLMLG----------GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ + D V G + H LS+P ++ + V L K + + +
Sbjct: 246 EEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCNQSEVIA 305
Query: 338 VIQIAA 343
+ + A
Sbjct: 306 LTRRGA 311
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 155 FGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+GQ G G+ S S+P + + + V +ACG+ HS +++ +V +G K GQ
Sbjct: 4 WGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGS---GEVLCWGENKYGQ 60
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------ST 266
G P L + + +S G + +S +G +++WG G N S
Sbjct: 61 CGTGTQE--QTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSR 118
Query: 267 SDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
++ P + + A+ G H +++ GE+ G + +G V ST L
Sbjct: 119 DNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCG----VGSTSDL- 173
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
++ + V +L G V + GA H+AVVT + T+G G GQLG G+ D P+ V
Sbjct: 174 LSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRV 231
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 256 LYTWGRGFNSTSD---VNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGM 310
+Y WG+ ++ + + P+ L ++ A G H ++ G GEVL G + +G
Sbjct: 1 VYFWGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQ 60
Query: 311 LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
+ + P V +L GV + ++ G H+ VV+E+ + +WG G +GQLG
Sbjct: 61 CGTGTQEQTEHPTFVG-----SLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGH 115
Query: 371 GNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
G+ + P VV + RD L V CG G T +
Sbjct: 116 GSRDNLTTPSVVQ---AMRGRDV-LAVTCGVGHTVIV 148
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 152/397 (38%), Gaps = 105/397 (26%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQL------LNLSSLSS--------------------- 68
VWS+G T G+LGTG ++ L P+ L + LSS
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145
Query: 69 ---------------------------VSMLACGGAHVLALTSPSSVIGGKVFSWG---- 97
+ +ACG H LAL+ G+V+ WG
Sbjct: 146 HDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKE-----GQVYVWGGSLH 200
Query: 98 --RGSSGQLGHGEMVDALYPKPVTF--FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
RG Q E D KPV F G + I I G HS + D+G L++ G G
Sbjct: 201 NKRGDRSQ----ERKDNAKYKPVLLQSFAGKK--IKQIDCGDFHSLALDDNGTLYSWGVG 254
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
G+ GHG + +P ++ F K + QI G H+L + D NQVY +G G+ GQ
Sbjct: 255 EKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITAD---NQVYAWGDGRYGQC 311
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + ++PQ +V + G+ ++ L + + +
Sbjct: 312 GFGE--FENTAIPQ---------LVNFPSQGNNTSYL-------------DDSVQQEILE 347
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
Q A G H LVLT G++ G + G L + RP + V +
Sbjct: 348 FFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRP-----KLVEGM 402
Query: 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
K +Q+AAG HS +T + G ++GQ GL
Sbjct: 403 LNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQCGL 439
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 145/323 (44%), Gaps = 42/323 (13%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V+S+G+ + G+LG G + L P+ V + + +S+G HSG V++ G L+ CG
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGLP--KLKVIFLSSGGKHSGLVTEDGKLWMCGS 143
Query: 153 GTFGQLGHGDYRSHSS----PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS- 207
+LG + S PV++ + + + Q+ACG H+L L K+ QVY +G
Sbjct: 144 NLHDKLGLEGITTGSKKTFKPVELLTQIF--IKQVACGDYHTLALSKE---GQVYVWGGS 198
Query: 208 --GKRGQLGVSKDRIRSVSLPQVTI-GLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
KRG S++R + V + +I I S AL G LY+WG G
Sbjct: 199 LHNKRGDR--SQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEK 256
Query: 265 ------STSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG------- 309
D PQ + +Q G +H L +T D +V G +G
Sbjct: 257 GECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEF 316
Query: 310 -------MLSDPERVSSTRPL--SVALEKVSNL-DGVKVIQIAAGAEHSAVVTENRAIMT 359
+++ P + ++T L SV E + D K+ QIAAG H+ V+T + I +
Sbjct: 317 ENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFS 376
Query: 360 WGWGEHGQLGLGNTCDQIHPKVV 382
+G+ + GQLG + PK+V
Sbjct: 377 FGYNQQGQLGHNTVDNYCRPKLV 399
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----------------------VSML 72
+V++WG G GQ G G + PQL+N S + + +
Sbjct: 299 QVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQI 358
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
A G H L LTS G++FS+G GQLGH + + PK V H+ ++
Sbjct: 359 AAGEMHTLVLTS-----SGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHK--TVQVA 411
Query: 133 AGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV 192
AG NHS +++ ++ CG+ +GQ G D + V S ++ N ++ G HS V
Sbjct: 412 AGRNHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSVNSFKLYAGGFHSWV 471
Query: 193 LLKDCL 198
+L + +
Sbjct: 472 VLDEMM 477
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+++ G T G+LG G Y P +V V ++ G +HS ++ +D +++ G
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTED---GKLWMCG 142
Query: 207 SGKRGQLGV------SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S +LG+ SK + V L L I I ++ + ALS EG +Y WG
Sbjct: 143 SNLHDKLGLEGITTGSKKTFKPVEL------LTQIFIKQVACGDYHTLALSKEGQVYVWG 196
Query: 261 ------RGFNSTSDVNCPQSLPSSL-SFS-----QAALGWNHVLVLTGDGEVLMLGGSH- 307
RG S + + P L SF+ Q G H L L +G + G
Sbjct: 197 GSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEK 256
Query: 308 ----HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
HG D E +++ DG + QI AG H+ +T + + WG G
Sbjct: 257 GECGHGKFEDQE----------TPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDG 306
Query: 364 EHGQLGLGNTCDQIHPKVVNL 384
+GQ G G + P++VN
Sbjct: 307 RYGQCGFGEFENTAIPQLVNF 327
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 168/391 (42%), Gaps = 82/391 (20%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG + LG +++D +S P+L+ + V +A G H A+T + G++
Sbjct: 282 EVFSWGNESSRTLG-HQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVT-----VSGEL 335
Query: 94 FSWGRGSS--GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
W G+ G L + + P + F +++ I+ G H+ ++ SG LFT G
Sbjct: 336 LEWSEGAHRLGLLSNWYERNQWSPHKL-FGPMDSISVSKIACGEWHTAIITSSGQLFTYG 394
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
DGTFG LGHGD + + P +V S V +ACG
Sbjct: 395 DGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACG------------------------- 429
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG---RGFNSTSD 268
H +V ++++ + +A G L+TWG RG +D
Sbjct: 430 -------------------PWHTAAVVEVTSSFNCNAP---SGKLFTWGDADRGKLGHAD 467
Query: 269 -----VNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
V L +S F Q + G +VLT G V +G S HG L +P
Sbjct: 468 KKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGNPH-------- 519
Query: 324 SVALEKVSNLDGVK----VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
E + ++G V +I++G+ H AV+T + TWG G GQLGLG+ ++ P
Sbjct: 520 -ADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSP 578
Query: 380 KVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
+V + Q R Q + CGS F+ A+ H
Sbjct: 579 TLV---EALQGRHVQ-SIACGSNFSAAVCLH 605
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 185/401 (46%), Gaps = 53/401 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG LG+ L L P+L+ + + V +ACG H +T G+VFS
Sbjct: 457 IFLWGDVLGSMLGSEDLPKAL-PRLVGSTKMLDVQSIACGENHAAIITK-----QGEVFS 510
Query: 96 WGRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG- 153
WG+ SSG+LGH V PK V T H + ++ G H+ V+ SG LF G+G
Sbjct: 511 WGKESSGRLGHKVNVSLSCPKIVKTLASVH---VKVVAFGSKHTCAVTVSGELFEWGEGA 567
Query: 154 -TFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ G L R+ P K+ N +V +IACG H ++ Q++ +G G G
Sbjct: 568 NSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITS---SGQLFTYGDGTFG 624
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL----------SAEGHLYTWG- 260
LG + ++ P+ L + + ++ +AA+ + G L+TWG
Sbjct: 625 VLG--HGDTQGIARPKEVESLKGLRMSSVACGPWHTAAIVEVMSSFKANAPSGKLFTWGN 682
Query: 261 --RGFNSTSDVN---CPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSD 313
RG +D P + S + F Q + G +VLT G V +G S HG L +
Sbjct: 683 ADRGKLDHADKKMKLVPTCVDSLIVYDFIQVSCGMALTVVLTVTGVVFTVGSSRHGQLGN 742
Query: 314 PERVSSTRPLSVALEKVSNLDGVK----VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ V E + ++G+ V +I++G+ H AV+T N + TWG G GQLG
Sbjct: 743 PQ---------VDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLG 793
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
LG+ ++ P +V + + R + + CGS FT AI H
Sbjct: 794 LGDYVNRSSPTLV---EALEGRHVE-SIACGSSFTAAICLH 830
>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
Length = 485
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 11/226 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++ G T GQLG G D +P+++ + LSSV +A G +++L++T G V+S
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEV--LSSVVQIAAGPSYILSVTE-----NGTVYS 289
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
+G G++ LGHGE D L P+ + F I +SAG H+ + +G ++T G G
Sbjct: 290 FGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC 349
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G LGHGD ++P ++S N+ V Q+ R + VL+ VYGFGS G LG
Sbjct: 350 GALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDS---GSVYGFGSMGFGSLGF 406
Query: 216 SKDRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
R+ V P++ L + IS + +++ G ++ +G
Sbjct: 407 LDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFG 452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 28/370 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+S G+G G LG G + ++ ++ L+ V ++ H + G+VF
Sbjct: 131 VYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ-----SGEVF 185
Query: 95 SWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ G SS GH + ++ P+ V G ++AG N + F++ G ++TCG
Sbjct: 186 TCGDNSSSCCGHRDTTRPIFKPRLVESLKG--IPCKQVAAGLNFTVFLTRKGHVYTCGTN 243
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
T GQLGHGD + +P + V +V QIA G + L + ++ VY FGSG L
Sbjct: 244 THGQLGHGDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTEN---GTVYSFGSGANFCL 298
Query: 214 G--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NS 265
G D ++ ++ + I IV +SA + + AL + G++YTWG+G+
Sbjct: 299 GHGEQHDELQPRAIQKFR--RKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGD 356
Query: 266 TSDVNCPQSLPSSLS--FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPL 323
+ P+ L S + Q VL G V G G L +R S + L
Sbjct: 357 EIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVL 416
Query: 324 SVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+ + L V QI+ G H+ V+T I +G E QLG + P +
Sbjct: 417 KPRI--LDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEIF 474
Query: 384 LGDEFQNRDT 393
+ D F++ ++
Sbjct: 475 IKDVFEDVES 484
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 17/262 (6%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF--VNKNVHQIACGM 187
I+ G H+ +S+S +++CG G G LG G + F + + VH ++
Sbjct: 115 QITTGKYHTLLISNSS-VYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVH-VSASF 172
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS 247
H+ +++ +V+ G G +D R + P++ L I ++A + +
Sbjct: 173 NHAAFVMQS---GEVFTCGDNSSSCCG-HRDTTRPIFKPRLVESLKGIPCKQVAAGLNFT 228
Query: 248 AALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
L+ +GH+YT G G T D P+ + S Q A G +++L +T +G V
Sbjct: 229 VFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENGTVY 288
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + L E+ +P A++K G+ +++++AG EH+ + N + TWG
Sbjct: 289 SFGSGANFCLGHGEQHDELQPR--AIQKFRR-KGIHIVRVSAGDEHAVALDSNGYVYTWG 345
Query: 362 WGEHGQLGLGNTCDQIHPKVVN 383
G G LG G+ ++ P+++
Sbjct: 346 KGYCGALGHGDEIEKTTPELLT 367
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 33/293 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+++WG G+LG D P ++ + + CG +S KVF
Sbjct: 233 KLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCG-----MYSSACISHDMKVF 287
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG GS GQLGH E D P+ V H I ++ G+ H +S G ++T G+G
Sbjct: 288 TWGSGSKGQLGHVEKSDEWLPRSVAAL--HHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQI---------ACGMRHSLVLLKDCLGNQVYGF 205
GQLGHGD S S+P K+ + ++ ACG +L+L ++ F
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTD---YGRLISF 402
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----- 260
G + G LG+ + R+ + + + V +SA + AA++++G++YTWG
Sbjct: 403 GMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFG 462
Query: 261 -------RGFNSTSDVNCPQSLPSSLSFSQAA--LGWNHVLVLTGDGEVLMLG 304
R +++ D P L L A G N+ ++L+ DG VL+LG
Sbjct: 463 AVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLVLG 515
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 134/295 (45%), Gaps = 27/295 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
+F+WG + QLG G+ +PK V+ I +S G +H + +G LFT G
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
G+LG + P +V ++ + + CGM S + D +V+ +GSG +GQ
Sbjct: 240 CDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDM---KVFTWGSGSKGQ 296
Query: 213 LG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNST---SD 268
LG V K LP+ LH I IV ++ + AALS +G +YTWG G + D
Sbjct: 297 LGHVEKS---DEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD 353
Query: 269 VN---CPQSLPSSLSFSQA-----------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
+N P+ L L + A G + L+LT G ++ G S G L
Sbjct: 354 LNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLG 413
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
E+ + RP L +D + + ++AG EH A VT + TWG G G +G
Sbjct: 414 EKRLAARP---HLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVG 465
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 25/268 (9%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+KV++WG+G+ GQLG DE P+ + + +A G H+ AL+ + G V
Sbjct: 284 MKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALS-----LDGDV 338
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTF-FDGHRYTITHI------SAGWNHSGFVSDSGC 146
++WG G GQLGHG++ PK + + + + + G + + ++D G
Sbjct: 339 YTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGR 398
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMRHSLVLLKDCLGNQVYG 204
L + G FG LG G+ R + P ++S + + ++ G H + GN VY
Sbjct: 399 LISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSK--GN-VYT 455
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI------VGISANGDRSAALSAEGHLYT 258
+G G G +G K R+ S P + +E+ S G+ + LS +G +
Sbjct: 456 WGQGCFGAVG--KPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDGCVLV 513
Query: 259 WGRGFNSTSDVNCPQSLPSSLSFSQAAL 286
G + +S P+S+ + + L
Sbjct: 514 LGDDSTEIRPMLYDESNPASVMKASSVL 541
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 237 IVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLP--SSLSFSQAALGW 288
I+ +S D AA+ + G L+TWG G S DV P + G
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGM 274
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
++ D +V G G L E+ P SVA L + ++Q+A G EH
Sbjct: 275 YSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVA-----ALHHIPIVQVALGYEHM 329
Query: 349 AVVTENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVNLGD---EFQNRDTQLEVFCGSGF 403
A ++ + + TWG GEHGQLG G N+C ++ L + E + + + + CG+
Sbjct: 330 AALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASV 389
Query: 404 TYAISRH 410
T ++ +
Sbjct: 390 TLILTDY 396
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 113/225 (50%), Gaps = 17/225 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
+LG V P+V L + I + A S AL++ G +
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 29/274 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+ + L G+ + ++ AG++ S +T
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALT 630
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM-LACGGAHVLALTSPSSVIGGKV 93
+V+SWG G G+LG G + P+L+ V + ++ G H A+T G++
Sbjct: 478 EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE-----DGEL 532
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG-CLFTCGD 152
++WG G G+LGHG+ P V + +S G +H+ +S G +++ G
Sbjct: 533 YTWGEGDFGRLGHGDSNSRNIPTLVKDIS----NVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
G G+LGHGD P + + + ++ G + SL L
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 25/256 (9%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
VS++ ++ G + QL G P SF + I G + V+ D
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTD--- 421
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGD-RSAALSAEGHLY 257
V G G G+LG+ +S +L ++T H I+ V S D + A + EG ++
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 258 TWGRG------FNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHH 308
+WG G ++S P+ + L + G+ H +T DGE+ G
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN-RAIMTWGWGEHGQ 367
G L + S++R + ++ +SN V +++ G+ H+ ++++ R + ++G G++G+
Sbjct: 541 GRLGHGD--SNSRNIPTLVKDISN-----VGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 368 LGLGNTCDQIHPKVVN 383
LG G+T PKV+
Sbjct: 594 LGHGDTNRVYKPKVIE 609
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 14/206 (6%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ S ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLG--HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+SWG+ GQLG H E D+ P + D + + ++ G +H+ ++ G LFT G
Sbjct: 213 YSWGKNEFGQLGLDHTESKDS--PSLIEALDNQK--VEFLACGGSHTALLTQDGLLFTFG 268
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G GQLGH ++ P V+ V QIACG H+L + D LG +V+ FGSGK G
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKEG 326
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEI 237
QLG R + + LP D++
Sbjct: 327 QLGNGGTRDQLIPLPMKVSSNEDLKF 352
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 23/229 (10%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L I +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLSGIPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G + T + P SL +L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSP-SLIEALDNQKVEFLACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELAGNRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 396
A V++ + ++G G+ GQLG G T DQ+ P + + N D + E
Sbjct: 308 LAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSS---NEDLKFE 353
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 38/296 (12%)
Query: 34 VKVWSWGAGTDGQL-----GTGRLHDELSPQLLNLSSL---SSVSMLACGGAHVLALTSP 85
+K+ S G D L G +D S + L S+ + + CG H LAL+
Sbjct: 97 MKIHSMDLGADHMLILSSGGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK- 155
Query: 86 SSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144
GG++F+WG+ GQLG G + P+ V G + ISAG HS +S S
Sbjct: 156 ----GGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSG--IPLAQISAGEAHSMALSMS 209
Query: 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
G +++ G FGQLG S SP + + N+ V +ACG H+ +L +D L ++
Sbjct: 210 GNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGL---LFT 266
Query: 205 FGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGR 261
FG+GK GQLG +++ +R P + L + I+ + A ++ G ++++G
Sbjct: 267 FGAGKHGQLGHNSTQNELR----PCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGS 322
Query: 262 GFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
G T D P LP +S ++ +H T + E++M+ G + +L
Sbjct: 323 GKEGQLGNGGTRDQLIP--LPMKVSSNEDLKFESH----TSEKELIMIAGENQSIL 372
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 38/328 (11%)
Query: 57 SPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPK 116
+P+ + L + + G H+L L+S GGK F + S L ++
Sbjct: 87 TPKCIKLGKNMKIHSMDLGADHMLILSS-----GGKPFEYDNYSMKHLRFESIL------ 135
Query: 117 PVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG-DYRSHSSPVKVSSF 175
I I+ G HS +S G LF G GQLG G + S ++P V
Sbjct: 136 -------QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL 188
Query: 176 VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDI 235
+ QI+ G HS+ L + +Y +G + GQLG+ D S P + L +
Sbjct: 189 SGIPLAQISAGEAHSMAL---SMSGNIYSWGKNEFGQLGL--DHTESKDSPSLIEALDNQ 243
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSLPSSLS---FSQAAL 286
++ ++ G +A L+ +G L+T+G G NST + P L + L+ +Q A
Sbjct: 244 KVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRP-CLVAELAGNRVTQIAC 302
Query: 287 GWNHVLVLTGD-GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA 345
G H L D G+V G G L + PL + KVS+ + +K +
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPM---KVSSNEDLKFESHTSEK 359
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNT 373
E + EN++I+ W E+ + L T
Sbjct: 360 ELIMIAGENQSILLWIKKENSYVNLRRT 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L G + + + + L R S+ L + +
Sbjct: 96 NMKIHSMDLGADHMLILSS---GGKPFEYDNYSMKHL-----RFESI--------LQEKK 139
Query: 237 IVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAAL 286
I+ I+ S ALS G L+ WG R F ST+ + L S + +Q +
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-SGIPLAQISA 198
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ G + G + G L S P + LD KV +A G
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSP-----SLIEALDNQKVEFLACGGS 253
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
H+A++T++ + T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 254 HTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELAGNRVTQIA--CGRWHTLA 309
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V+ +ACG H L LTS G+
Sbjct: 48 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVTEVACGSYHSLVLTSD-----GE 101
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + L P+ VT ++ + +I+ G S V ++G ++ G
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVYVWGY 160
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P ++++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 161 NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 217
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA + GH+Y WG+
Sbjct: 218 LGTGNKSNQSYPAPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 265
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 22/271 (8%)
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHG 161
G LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNG 63
Query: 162 DYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S
Sbjct: 64 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTA 119
Query: 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQS 274
+ +VT L + +V I+ S A+ G +Y WG G S+ + P
Sbjct: 120 NQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 179
Query: 275 LPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
+ + + + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVEK--- 236
Query: 333 LDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA A SA T+ + WG
Sbjct: 237 ---DRIIEIAACHSAHTSAAKTQGGHVYMWG 264
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 45 GQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKVFSWGRGSSGQ 103
G LG G + + P+ L + ++ L+ G G H++ T+ G+VF+WG + Q
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTE-----GEVFTWGHNAYSQ 59
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG+G L P ++ ++ +T ++ G HS ++ G +F G GQ+G G
Sbjct: 60 LGNGTTNHGLVPCHISTNLSNK-QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 118
Query: 164 RSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
+ P +V+ + NK V IACG S+ ++ +VY +G GQLG+ +
Sbjct: 119 ANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNT---GEVYVWGYNGNGQLGLGSSGNQP 175
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
P L I + ++ + L+ EG +Y WG
Sbjct: 176 T--PCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 211
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H+++ T +GEV G + + L + P ++ +NL +V ++A G+ HS
Sbjct: 39 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHIS----TNLSNKQVTEVACGSYHSL 94
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
V+T + + WG+ GQ+G G+T +Q+ P+ V QN+ + + CG + A+
Sbjct: 95 VLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVT--GCLQNK-VVVNIACGQMCSMAV 149
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 157/347 (45%), Gaps = 37/347 (10%)
Query: 38 SWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+WG G LG G L D+LSP ++L + +++S +A G H LALTS G V +
Sbjct: 67 AWGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTS-----TGTVLA 121
Query: 96 WGRGSSGQLGHGEMV------DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
WG G LG+G D+ P V G T+T ++A +S ++ +G +
Sbjct: 122 WGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGT--TVTSVAASSTYSLALTATGTVLA 179
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK 209
G+ GQLG+G PV ++ + IA H L L + V +GS
Sbjct: 180 WGNNDQGQLGNGTNTDSYLPVPLALPAATTITAIAAATNHGLALTSN---GTVLAWGSNG 236
Query: 210 RGQLG----VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
GQLG + + +V+LP T I I+A G S AL++ G + TWG+
Sbjct: 237 SGQLGNGNTTNSNTPVTVALPAGT------TITAIAAAGSHSMALTSTGTVLTWGQD--- 287
Query: 266 TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
+ + P P+ ++ + A G +H L LT G+V G ++ G L + +S+ P+
Sbjct: 288 -TVLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPA 346
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
++ + IA G S +T ++ WG +GQ+G G
Sbjct: 347 SVPT-----DTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGT 388
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 150/337 (44%), Gaps = 39/337 (11%)
Query: 35 KVWSWGAGTDGQLGTGRL------HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSV 88
V +WG G LG G +D P ++L + ++V+ +A + LALT+
Sbjct: 118 TVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSVAASSTYSLALTA---- 173
Query: 89 IGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
G V +WG GQLG+G D+ P P+ TIT I+A NH ++ +G +
Sbjct: 174 -TGTVLAWGNNDQGQLGNGTNTDSYLPVPLALP--AATTITAIAAATNHGLALTSNGTVL 230
Query: 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G GQLG+G+ + ++PV V+ + IA HS+ L V +G
Sbjct: 231 AWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIAAAGSHSMALTST---GTVLTWG-- 285
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+D + LP + I I +++ D S AL++ G ++TWG +
Sbjct: 286 --------QDTV----LPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGANYFGSLG 333
Query: 264 NST---SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N T S V P S+P+ + + A G L LT G++L G +++G + + R S
Sbjct: 334 NGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRTGSW 393
Query: 321 RPLSVALE-KVSNLDGVKVIQIAAGAEHSAVVTENRA 356
+ V++ VS K+ +A G HS V RA
Sbjct: 394 PGMGVSVPVPVSLAADTKITTMAGGYYHSLAVAAERA 430
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 40/318 (12%)
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV--DALYPKPVTFFDGHRYTITHISAGW 135
H A T PS G +WGR G LG G D L P V G TI+ ++AG
Sbjct: 50 HAAAATPPSGAATGIGLAWGRDGYGALGVGTATLDDKLSPVRVHLPTGT--TISDVAAGA 107
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS------PVKVSSFVNKNVHQIACGMRH 189
HS ++ +G + G +G LG+G +S+ P V V +A +
Sbjct: 108 VHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSVAASSTY 167
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
SL L V +G+ +GQLG + + +P I + + N A
Sbjct: 168 SLALTAT---GTVLAWGNNDQGQLGNGTNTDSYLPVPLALPAATTITAIAAATN--HGLA 222
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQS--LPSSLSFSQAALGWNHVLVLTGDGEVL 301
L++ G + WG G +T++ N P + LP+ + + A +H + LT G VL
Sbjct: 223 LTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVL 282
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + P+ + G+ + +A+G +HS +T + TWG
Sbjct: 283 TWG------------QDTVLPIPIVFPA-----GITITAVASGNDHSLALTSTGKVFTWG 325
Query: 362 WGEHGQLGLGNTCDQIHP 379
G LG G + P
Sbjct: 326 ANYFGSLGNGTFANSSVP 343
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGF-----NSTSDVNCPQS---------LPSSLSF 281
I ++A S AL++ G + WG + N T N Q+ LP+ +
Sbjct: 99 TISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTV 158
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
+ A + L LT G VL G + G L + S P+ +AL + + I
Sbjct: 159 TSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLPVPLALPAAT-----TITAI 213
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
AA H +T N ++ WG GQLG GNT + P V L
Sbjct: 214 AAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVAL 256
>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
Length = 854
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 83 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 137
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 138 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 195
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D +V+ FGSGK GQL
Sbjct: 196 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 253
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + LP ++++ ++ + + W + NS VN +
Sbjct: 254 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 311
Query: 274 SLPS 277
++P+
Sbjct: 312 TIPT 315
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
G +++ +G GQLGV + + S + PQ+ L + + ISA S ALS G++Y+
Sbjct: 81 GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYS 139
Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHG 309
WG+ G T + P SL +L + A G +H +LT DG + G HG
Sbjct: 140 WGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHG 198
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQL 368
L + RP VA L G +V QIA G H+ A V++ + ++G G+ GQL
Sbjct: 199 QLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQL 253
Query: 369 GLGNTCDQIHPKVVNL 384
G G T DQ+ P V +
Sbjct: 254 GNGGTLDQLIPLPVKV 269
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 23/233 (9%)
Query: 88 VIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
V GG++F+WG+ GQLG G + P+ V G + ISAG HS +S SG
Sbjct: 79 VRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGN 136
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+++ G FGQLG G S SP + + N+ V +ACG HS +L +D L ++ FG
Sbjct: 137 IYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGL---LFTFG 193
Query: 207 SGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
+GK GQLG +++ +R + ++ +G +I A +S G ++++G G +
Sbjct: 194 AGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGRWHTLAYVSDFGKVFSFGSGKD 250
Query: 265 ------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
T D P LP +S S+ +H T + E++M+ G + +L
Sbjct: 251 GQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSEKELIMIAGGNQSIL 297
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 244 GDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLV 293
G+ S + G L+ WG R F ST+ + L + + +Q + G H +
Sbjct: 72 GNLSRFIVRGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLAQISAGEAHSMA 130
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
L+ G + G + G L S P + LD KV +A G HSA++T+
Sbjct: 131 LSMSGNIYSWGKNEFGQLGLGHTESKDSP-----SLIEALDNQKVEFLACGGSHSALLTQ 185
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
+ + T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 186 DGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGNRVTQIA--CGRWHTLA 234
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ +T I+ G S V D+G +F G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVT-IACGQMCSMAVVDTGEVFVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P ++++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRVIEIAACHS-AHTSAAKTQGGHVYMWGQ 336
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 22/286 (7%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ + ++F G G LG G++ + P+ + G + +G H + G
Sbjct: 61 TTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSG-PHVVLATTEGE 119
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+FT G + QLG+G P +S+ NK V ++ACG HSLVL D +V+ +
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 176
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G GQ+G + + +VT L + IV I+ S A+ G ++ WG
Sbjct: 177 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNG 235
Query: 262 --GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G S+ + P + + + + A G+ H LVLT +G+V G + +G L +
Sbjct: 236 QLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ + P V +EK +VI+IAA A SA T+ + WG
Sbjct: 296 NQSYPTPVVVEK------DRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F G G LG GD +S P K+ S K + ++ G +VL +V+ +G
Sbjct: 67 IFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATT--EGEVFTWG 124
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
QLG V ++ L + +++ ++ S L+++G ++ WG
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G ST++ P+ + L A G + + GEV + G + +G L
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSG 243
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ P +++ L G++V ++A G H+ V+T+ + WG +GQLG GN +Q
Sbjct: 244 NQPTPC-----RIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 298
Query: 378 HPKVV 382
+P V
Sbjct: 299 YPTPV 303
>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
Length = 435
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 178/405 (43%), Gaps = 57/405 (14%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI-----GGKV 93
WG+G G+LG G L + +P + + S S++ +ACGGAH L LT + + +V
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTVSDNKLTHVTETRRV 113
Query: 94 FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+ G GQLG ++ A+ P V+ D I HISAG+ HS ++ G L+ G
Sbjct: 114 FATGLNDCGQLGVSDVKSHAMDPLEVSGLD---KDILHISAGYYHSAAITVDGELYMWGK 170
Query: 153 GTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ GQLG G R P KV + + +A G HS+ + G +V +G G
Sbjct: 171 NSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGGS 227
Query: 211 GQLGVSKD-------RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
G+LG R S P++ L I++ ++A SA G + +G
Sbjct: 228 GRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKS 287
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
GF + P S+ S + +++ V G GE+ G + +G L
Sbjct: 288 INKMGFGGVRNATTP-SIISEVPYAEE--------VACGGGELYTWGSNENGCLGTDSTY 338
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG------------EH 365
S P+ V + + V Q++ G +H+A +++N + TWGWG
Sbjct: 339 VSHSPVRVEGPFLES----TVSQVSCGWKHTAAISDNN-VFTWGWGGSHGTFSVDGHSSG 393
Query: 366 GQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
GQLG G+ D P +V+LG + + + CG T A+ H
Sbjct: 394 GQLGHGSDVDYARPAMVDLGKNVR----AVHISCGFNHTAAVLEH 434
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 142/352 (40%), Gaps = 61/352 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDE-LSPQLLNLSSLSS-VSMLACGGAHVLALTSPSSVIGGK 92
+V++ G GQLG + + P L +S L + ++ G H A+T + G+
Sbjct: 112 RVFATGLNDCGQLGVSDVKSHAMDP--LEVSGLDKDILHISAGYYHSAAIT-----VDGE 164
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++ WG+ SSGQLG G+ + P H TI ++ G HS V+D G + + G
Sbjct: 165 LYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGG 224
Query: 153 GTFGQLG-------HGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVY 203
G G+LG G RS+S +P + V +A G+ HS ++ +
Sbjct: 225 GGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDEN---GSAF 281
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR-- 261
FG ++G +R+ + P + + E V G LYTWG
Sbjct: 282 MFGEKSINKMGFGG--VRNATTPSIISEVPYAEEVACGG-----------GELYTWGSNE 328
Query: 262 ----GFNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLM--LGGSH----- 307
G +ST + P + + SQ + GW H ++ D V GGSH
Sbjct: 329 NGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFSV 387
Query: 308 -----HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G L V RP V L K V+ + I+ G H+A V E+
Sbjct: 388 DGHSSGGQLGHGSDVDYARPAMVDLGK-----NVRAVHISCGFNHTAAVLEH 434
>gi|356571739|ref|XP_003554031.1| PREDICTED: uncharacterized protein LOC100800604 [Glycine max]
Length = 1061
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+SWG+GT+ QLGTG H + P ++ S + +++ G H +ALT+ G+V
Sbjct: 154 TEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTA-----RGEV 208
Query: 94 FSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147
++WG G G+LGH + + P+ VT G R + I A +H + G +
Sbjct: 209 YTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMA-IGAAKHHMVIATQGGEV 267
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
FT G GQLG+ + +P +VSS ++ V +A +H+ V+ LG +V+ +G
Sbjct: 268 FTWGSNREGQLGYPSVDTQPTPRRVSSLRSRIV-AVAAANKHTAVV--SDLG-EVFTWGC 323
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267
+ GQLG S P+V L + +SA + L ++G ++TWG +
Sbjct: 324 NREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTPK 383
Query: 268 DVNCPQSLPSS------------LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPE 315
V ++L S LS A G H + LT DG + + + SDP+
Sbjct: 384 RVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSMALTDDGALF------YWVSSDPD 437
Query: 316 RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+ +++ + G ++ I+AG +A VT + W G+ G+
Sbjct: 438 ---------LRCQQLYAMCGRNMVSISAGKYWTAAVTATGDVYMWD-GKKGK 479
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 141/294 (47%), Gaps = 32/294 (10%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
S + +VFSWG G++ QLG G P V G I ISAG HS ++ G
Sbjct: 150 SSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGS--FIKLISAGKFHSVALTARGE 207
Query: 147 LFTCGDGTFGQLGHGDYRSHS------SPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLG 199
++T G G G+LGH D+ HS +P +V+S + ++ V I H ++ + G
Sbjct: 208 VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQ---G 264
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +GS + GQLG + + P+ L IV ++A +A +S G ++TW
Sbjct: 265 GEVFTWGSNREGQLGYPS--VDTQPTPRRVSSLRS-RIVAVAAANKHTAVVSDLGEVFTW 321
Query: 260 G------RGF-NSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
G G+ S S N + SL + ++ + H +VL DGEV G H
Sbjct: 322 GCNREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWG---HR 378
Query: 310 MLSDPERVSSTRPLSVA---LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+++ P+RV +R L + L K + + V+ IAAG HS +T++ A+ W
Sbjct: 379 LVT-PKRVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSMALTDDGALFYW 431
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +GSG QLG I+ + ++G I++ ISA S AL+A G +Y
Sbjct: 152 VATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKL--ISAGKFHSVALTARGEVY 209
Query: 258 TWGRG------------FNSTSDVNCPQSLPSSL-SFSQAALGW--NHVLVLTGDGEVLM 302
TWG G + + V P+ + S L S A+G +H+++ T GEV
Sbjct: 210 TWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFT 269
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + G L P + P +VS+L +++ +AA +H+AVV++ + TWG
Sbjct: 270 WGSNREGQLGYPSVDTQPTP-----RRVSSLRS-RIVAVAAANKHTAVVSDLGEVFTWGC 323
Query: 363 GEHGQLGLG--NTCDQIHPKVVN 383
GQLG G N+ P+VV
Sbjct: 324 NREGQLGYGTSNSASNYTPRVVE 346
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)
Query: 251 SAEGHLYTWGRGFN---STSDVNCPQSLPSSL-----SFSQ-AALGWNHVLVLTGDGEVL 301
S +++WG G N T + + Q LP + SF + + G H + LT GEV
Sbjct: 151 SVATEVFSWGSGTNYQLGTGNAHI-QKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVY 209
Query: 302 MLGGSHHGMLSDPE-RVSSTRPLSVALEKV-SNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G G L P+ + S + + +V S L +V+ I A H + T+ + T
Sbjct: 210 TWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFT 269
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN------LGDEFQNRDTQLEVFCGSGFTYAISRH 410
WG GQLG + Q P+ V+ + N+ T + G FT+ +R
Sbjct: 270 WGSNREGQLGYPSVDTQPTPRRVSSLRSRIVAVAAANKHTAVVSDLGEVFTWGCNRE 326
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 139/289 (48%), Gaps = 27/289 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 50 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 103
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVF WG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 104 GKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 161
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 162 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 218
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 219 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 276
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
SDV+ PQ + A+G H L +T G+V G + HG
Sbjct: 277 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG 325
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 24/341 (7%)
Query: 39 WGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
WG QLG + P S +V +A G + A+T + GKV++ G
Sbjct: 2 WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-----VEGKVYACGE 56
Query: 99 GSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQ 157
++G+LG G + P+ +T + + +G H+ ++ G +F G+G G+
Sbjct: 57 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGK 116
Query: 158 LGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217
LGH + P + + K + IACG HS L ++Y +G G+ G+LG
Sbjct: 117 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS---GELYTWGLGEYGRLGHGD 173
Query: 218 DRIR-SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVN 270
+ + + +V +G H + V + ++ AL+ EG +++WG G + N
Sbjct: 174 NTTQLKPKMVKVLLG-HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 232
Query: 271 CPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALE 328
PQ++ + Q G L LT G V G + L V +P +
Sbjct: 233 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP-----Q 287
Query: 329 KVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
V L G K++ +A GA H VT++ + WG +HGQ G
Sbjct: 288 VVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 29/258 (11%)
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPV-----KVSSFVNKNVHQIACGMRHSLVLLK 195
V+ G ++ CG+ T G+LG G S + P+ +SS+V K V + G RH+ L
Sbjct: 45 VTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKV-AVHSGGRHATALTV 102
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D +V+ +G G G+LG R+ + P++ L I I+ SAAL++ G
Sbjct: 103 D---GKVFWWGEGDDGKLG-HFSRM-NCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 157
Query: 256 LYTWGRGF-------NSTSDVNCPQSLPSSLSFS--QAALGWN--HVLVLTGDGEVLMLG 304
LYTWG G ++T+ + P+ + L Q A G L LT +G V G
Sbjct: 158 LYTWGLGEYGRLGHGDNTTQLK-PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 216
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
G L P + + L+G V QI GA+ S +T++ + TWG G+
Sbjct: 217 DGDFGKLGRGGSEGCNIP-----QNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 271
Query: 365 HGQLGLGNTCDQIHPKVV 382
+ +LG G+ P+VV
Sbjct: 272 YFRLGHGSDVHVRKPQVV 289
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN-------STSDVNCPQS 274
+ +P + L + +V ++ A++ EG +Y G N S+ V P+
Sbjct: 17 KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQ 76
Query: 275 LP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
+ SS + A+ G H LT DG+V G G L R++ +P + K
Sbjct: 77 ITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKT 136
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEF 388
++ IA G+ HSA +T + + TWG GE+G+LG G+ Q+ PK+V LG
Sbjct: 137 K-----RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV 191
Query: 389 QNRDTQLEVFCGS 401
++V CGS
Sbjct: 192 ------IQVACGS 198
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 175
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 234
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 235 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 291
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 292 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 339
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 21 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 80
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 81 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 139
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 140 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 195
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 196 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 255
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 256 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 310
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 311 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 338
>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
Length = 483
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 49/353 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ + S + ACG H LALT G VF
Sbjct: 130 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET-----GSVF 184
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 185 AFGENKMGQLGLGNQTDAIPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 242
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH +Y P +V+ F+ K V +ACG H+
Sbjct: 243 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHT 302
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I A S
Sbjct: 303 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGAAQIYAGYTCS 356
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ A G + ++V + +
Sbjct: 357 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPS 416
Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G L D + SST A ++V LDG+ Q+A G HS V+ + +
Sbjct: 417 PTFGELGYGDHKPKSST-----AAQEVKTLDGIYTEQVAMGYSHSLVIARDES 464
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 39/287 (13%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ PK + + I + G N
Sbjct: 120 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLS--KEVIVSAACGRN 172
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++++G +F G+ GQLG G+ SP ++ + + + ++ACG S+++
Sbjct: 173 HTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQI-MYNGQPITKMACGAEFSMIM-- 229
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ +D E+V R A+ E
Sbjct: 230 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 277
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 278 ---------KTKD---GQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHA 325
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
E+ P L K+ + G QI AG S V+E + WG
Sbjct: 326 EQKDEMVP---RLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWG 369
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 42/277 (15%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + + ACG H+L L +
Sbjct: 121 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 180
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ FG K GQLG+ ++ ++ P I + I ++ + S + +G+L
Sbjct: 181 ---GSVFAFGENKMGQLGLG-NQTDAIPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 235
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 236 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 267
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
V R +++ +EK + + V V +A G H+ V+ + + +WG+G +G+LG
Sbjct: 268 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHA 325
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D++ P++V L D F R +++ G ++A+S
Sbjct: 326 EQKDEMVPRLVKLFD-FPGRGAA-QIYAGYTCSFAVS 360
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 298 GEVLMLGGSHHGMLSD---PERVSSTRPLSVAL---EKVSNLDGVKVIQIAAG--AEHSA 349
G++L+ G ++ ++ P++ ++ R L L + L GV+V + +G A HS
Sbjct: 64 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL 123
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++T + +WG E GQLG G+T PK++ E +++ + CG T A++
Sbjct: 124 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLI----EVLSKEVIVSAACGRNHTLALT 178
>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 883
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 91 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 145
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 146 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 203
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D +V+ FGSGK GQL
Sbjct: 204 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 261
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + LP ++++ ++ + + W + NS VN +
Sbjct: 262 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 319
Query: 274 SLPS 277
++P+
Sbjct: 320 TIPT 323
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 181 HQIACGMRHSLVLLKDCLGNQV-----------------YGFGSGKRGQLGVSKDRIRSV 223
QI+C R VL + G QV + +G GQLGV + + S
Sbjct: 54 RQISCSPRRLAVLERGGAGVQVHQVLAGSGGARTPSGELFAWGQNLHGQLGVGR-KFPST 112
Query: 224 SLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS 277
+ PQ+ L + + ISA S ALS G++Y+WG+ G T + P SL
Sbjct: 113 TTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-SLIE 171
Query: 278 SLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+L + A G +H +LT DG + G HG L + RP VA L
Sbjct: 172 ALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELV 226
Query: 335 GVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
G +V QIA G H+ A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 227 GNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 277
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 69 VSMLACGGA-----HVLALTSPSSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFFD 122
+++L GGA VLA + + G++F+WG+ GQLG G + P+ V
Sbjct: 63 LAVLERGGAGVQVHQVLAGSGGARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 122
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ 182
G + ISAG HS +S SG +++ G FGQLG G S SP + + N+ V
Sbjct: 123 G--VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEF 180
Query: 183 IACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGI 240
+ACG HS +L +D L ++ FG+GK GQLG +++ +R + ++ +G +I
Sbjct: 181 LACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA-- 234
Query: 241 SANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
A +S G ++++G G + T D P LP +S S+ +H
Sbjct: 235 CGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH---- 288
Query: 295 TGDGEVLMLGGSHHGML 311
T + E++M+ G + +L
Sbjct: 289 TSEKELIMIAGGNQSIL 305
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 249 ALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
A + G L+ WG R F ST+ + L + + +Q + G H + L+ G
Sbjct: 85 ARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLAQISAGEAHSMALSMSG 143
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
+ G + G L S P + LD KV +A G HSA++T++ +
Sbjct: 144 NIYSWGKNEFGQLGLGHTESKDSP-----SLIEALDNQKVEFLACGGSHSALLTQDGLLF 198
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 199 TFGAGKHGQLGHNSTQNELRPCLV--AELVGNRVTQIA--CGRWHTLA 242
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 152/347 (43%), Gaps = 63/347 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ++ACG H L T+ GKV+
Sbjct: 56 KLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTA-----KGKVY 110
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G S GQLG G+ + K + FFD I ++AG N S ++ SG LF GD T
Sbjct: 111 ASGGNSEGQLGLGDCEERTSFKRLDFFDSQ-GPIKMLAAGSNTSAALTVSGKLFMWGDNT 169
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G G SSP +VS V + + ++CG HS ++ D +Y FG G+LG
Sbjct: 170 EGQIGLGKESQVSSPQEVS--VGQPISWVSCGYYHSALVTVD---GALYTFGERDSGKLG 224
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ ++ +PQ+ + + + ++ G + AL AEG++YT+
Sbjct: 225 LGTHQLPGHRVPQLVKSIKE-PVRQVACGGGHTVAL-AEGNVYTF--------------- 267
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
G G+ LG HG RV V +
Sbjct: 268 ---------------------GLGQFGQLG---HGTFIFESRVPRL---------VEHFK 294
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
+ Q+ G H+AV+TE+ + T+G G HG+LGLG N +Q P
Sbjct: 295 KGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKP 341
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ WG T+GQ+G G+ SPQ +++ +S ++CG H +T + G ++
Sbjct: 161 KLFMWGDNTEGQIGLGKESQVSSPQEVSVGQ--PISWVSCGYYHSALVT-----VDGALY 213
Query: 95 SWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
++G SG+LG G ++ P+ V + + ++ G H+ +++ G ++T G
Sbjct: 214 TFGERDSGKLGLGTHQLPGHRVPQLVKSI---KEPVRQVACGGGHTVALAE-GNVYTFGL 269
Query: 153 GTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G FGQLGHG + S P V F Q+ CG H+ V+ +D L +Y FG G+ G
Sbjct: 270 GQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGL---LYTFGDGRHG 326
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVG 239
+LG+ ++ + P + + + G
Sbjct: 327 KLGLGEENFTNQFKPTLCLRFLKYNVQG 354
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVF 398
++IA G EH+A++TEN + +G GQLGLG+ P V ++ QL V
Sbjct: 39 LRIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKA---LKSEKVQL-VA 94
Query: 399 CGSGFT 404
CG T
Sbjct: 95 CGRNHT 100
>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
Length = 653
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
E + +++SWG+G + QLGTG H + P ++ + + ++ H +A+++
Sbjct: 148 ERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSA--- 204
Query: 88 VIGGKVFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
G+V++WG G G+LGH E + P+ VT G R + I+A +H+
Sbjct: 205 --RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSR-RVKAIAAAKHHTVVA 261
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
++ G +FT G GQLG+ + P +VSS +K V +A +H+ V+ + +
Sbjct: 262 TEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-AVAAANKHTAVISE---SGE 317
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V+ +G K+GQLG S P+V L + G++A + L A+G ++TWG
Sbjct: 318 VFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGH 377
Query: 262 GFNSTSDV----NCPQSLPSSLSFSQ------AALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ V N ++ + L F Q A G H + LT DG + + +
Sbjct: 378 RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIF------YWVS 431
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
SDP+ + ++V +L G V I+AG A VT + W
Sbjct: 432 SDPD---------LRCQQVYSLCGRTVSSISAGKYWIAAVTATGDVYMW 471
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + +++ +GSG QLG I+ LP LH I +SA S A+SA G
Sbjct: 149 RDSVATELFSWGSGVNYQLGTGNTHIQK--LPCKVDSLHGTFIKSVSAAKFHSVAVSARG 206
Query: 255 HLYTWGRG------------FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGE 299
+YTWG G + + V P+ + L A +H +V T GE
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G + G L T+P+ +VS+L K++ +AA +H+AV++E+ + T
Sbjct: 267 VFTWGSNREGQLGYTS--VDTQPIP---RRVSSLKS-KIVAVAAANKHTAVISESGEVFT 320
Query: 360 WGWGEHGQLGLG--NTCDQIHPKVV 382
WG + GQLG G N+ P+VV
Sbjct: 321 WGCNKKGQLGYGTSNSASNYTPRVV 345
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 22/229 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
LF+ G G QLG G+ P KV S + ++ HS+ + +VY +G
Sbjct: 156 LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAV---SARGEVYTWG 212
Query: 207 SGKRGQLGVSKDRIRS-----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G+ G+LG + I S ++ QVT+GL + I+A + + G ++TWG
Sbjct: 213 FGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGS 272
Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLS-- 312
G+ S P+ + S S A N H V++ GEV G + G L
Sbjct: 273 NREGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYG 332
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
S+ P V K L GV AA H+ V+ + I TWG
Sbjct: 333 TSNSASNYTPRVVEYLKGKVLKGV-----AAAKYHTIVLGADGEIFTWG 376
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 12/144 (8%)
Query: 251 SAEGHLYTWGRGFN---STSDVNCPQSLPSSLS------FSQAALGWNHVLVLTGDGEVL 301
S L++WG G N T + + Q LP + + H + ++ GEV
Sbjct: 151 SVATELFSWGSGVNYQLGTGNTHI-QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVY 209
Query: 302 MLGGSHHGMLSDPE-RVSSTRPLSVALEKVS-NLDGVKVIQIAAGAEHSAVVTENRAIMT 359
G G L PE + S + + +V+ L +V IAA H+ V TE + T
Sbjct: 210 TWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFT 269
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN 383
WG GQLG + Q P+ V+
Sbjct: 270 WGSNREGQLGYTSVDTQPIPRRVS 293
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V DSG ++ G
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 236
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 139/329 (42%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSP--------SSVIGG------------KVFSWGRGSSGQ 103
++LSS+ ML G + +L S + V GG ++F G G
Sbjct: 23 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGC 82
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + G + +G H + G +FT G + QLG+G
Sbjct: 83 LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+ +VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 198 PTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 313 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 340
>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 658
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 16/224 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNL--SSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
V + G G+ G+LG G +++ + LN S ++ +S H LALTS G+V
Sbjct: 427 VRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSE-----GQV 481
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
FSWG G G+LGHG + YPK + + + ISAG+ HS V+D G L+T G+G
Sbjct: 482 FSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVC-ISAGYRHSACVTDDGQLYTWGEG 540
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHGD S + P V NV ++ CG H++ + +D V+ FG G G+L
Sbjct: 541 DYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQD--SRTVWSFGGGDNGKL 596
Query: 214 GV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
G +RI + + IGL I+ VG + S AL++ G +
Sbjct: 597 GHGDTNRIYKPKIIESLIGLF-IKKVGCGSQS--SLALTSTGQV 637
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 69/306 (22%)
Query: 85 PSSVI---GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
P+S++ +VF WG SS QL G L PK F + I AG + +
Sbjct: 366 PNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQ----QIEAGQYCTFVI 421
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR---HSLVLLKDCL 198
S G + CG G++G+LG GD ++ + +K +F N + +I+ H+L L +
Sbjct: 422 SSDGSVRACGKGSYGRLGLGD-SNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSE-- 478
Query: 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLY 257
QV+ +G G G+LG + P+V +G L +V ISA
Sbjct: 479 -GQVFSWGDGDYGKLG--HGNTLTQKYPKVILGVLMGKVVVCISA--------------- 520
Query: 258 TWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G+ H +T DG++ G +G L +
Sbjct: 521 -----------------------------GYRHSACVTDDGQLYTWGEGDYGRLGHGD-- 549
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
S++R + ++ VSN V ++ G+ H+ AV ++R + ++G G++G+LG G+T
Sbjct: 550 SNSRNVPTLVKDVSN-----VGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRI 604
Query: 377 IHPKVV 382
PK++
Sbjct: 605 YKPKII 610
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 26/280 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG+ + QL G L P++ S + + G ++S G V
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKILLPKMA--ISFAESQQIEAGQYCTFVISS-----DGSVR 428
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G+GS G+LG G+ + K + F + I+ H+ ++ G +F+ GDG
Sbjct: 429 ACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGD 488
Query: 155 FGQLGHGDYRSHSSP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ + P V + + K V I+ G RHS + D Q+Y +G G G+L
Sbjct: 489 YGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDD---GQLYTWGEGDYGRL 545
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVG-ISANGDRSAALSAEGH-LYTWGRGFN------S 265
G R+V P + + D+ VG + + A+S + ++++G G N
Sbjct: 546 GHGDSNSRNV--PTL---VKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD 600
Query: 266 TSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLML 303
T+ + P+ + S L + G L LT G+V +
Sbjct: 601 TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQVRFI 640
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 200 NQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYT 258
++V+ +GS QL S+++I LP++ I + + I A + +S++G +
Sbjct: 375 SEVFVWGSNSSHQLAEGSQEKIL---LPKMAISFAESQ--QIEAGQYCTFVISSDGSVRA 429
Query: 259 WGRGF----------NST--SDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
G+G N T +N S+ + +S S+ + G H L LT +G+V G
Sbjct: 430 CGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDG--HTLALTSEGQVFSWGDG 487
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
+G L ++ P + + L G V+ I+AG HSA VT++ + TWG G++G
Sbjct: 488 DYGKLGHGNTLTQKYPKVI----LGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYG 543
Query: 367 QLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTYAISR 409
+LG G++ + P +V N+G +V CGS T A+S+
Sbjct: 544 RLGHGDSNSRNVPTLVKDVSNVG----------KVVCGSSHTIAVSQ 580
>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
Length = 439
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 151/353 (42%), Gaps = 49/353 (13%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ + S + ACG H LALT G VF
Sbjct: 86 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET-----GSVF 140
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 141 AFGENKMGQLGLGNQTDAIPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 198
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH +Y P +V+ F+ K V +ACG H+
Sbjct: 199 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHT 258
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I A S
Sbjct: 259 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGAAQIYAGYTCS 312
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ A G + ++V + +
Sbjct: 313 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPS 372
Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G L D + SST A ++V LDG+ Q+A G HS V+ + +
Sbjct: 373 PTFGELGYGDHKPKSST-----AAQEVKTLDGIYTEQVAMGYSHSLVIARDES 420
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 39/287 (13%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ PK + + I + G N
Sbjct: 76 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLS--KEVIVSAACGRN 128
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++++G +F G+ GQLG G+ SP ++ + + + ++ACG S+++
Sbjct: 129 HTLALTETGSVFAFGENKMGQLGLGNQTDAIPSPAQI-MYNGQPITKMACGAEFSMIM-- 185
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ +D E+V R A+ E
Sbjct: 186 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 233
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 234 ---------KTKD---GQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHA 281
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
E+ P L K+ + G QI AG S V+E + WG
Sbjct: 282 EQKDEMVP---RLVKLFDFPGRGAAQIYAGYTCSFAVSEVGGLFFWG 325
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 42/277 (15%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + + ACG H+L L +
Sbjct: 77 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTET 136
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ FG K GQLG+ ++ ++ P I + I ++ + S + +G+L
Sbjct: 137 ---GSVFAFGENKMGQLGLG-NQTDAIPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 191
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ LG N DG+ + + D E
Sbjct: 192 YSFG----------CPE---------YGQLGHN------SDGKFI---ARAQRIEYDCEL 223
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
V R +++ +EK + + V V +A G H+ V+ + + +WG+G +G+LG
Sbjct: 224 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHA 281
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D++ P++V L D F R +++ G ++A+S
Sbjct: 282 EQKDEMVPRLVKLFD-FPGRGAA-QIYAGYTCSFAVS 316
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 298 GEVLMLGGSHHGMLSD---PERVSSTRPLSVAL---EKVSNLDGVKVIQIAAG--AEHSA 349
G++L+ G ++ ++ P++ ++ R L L + L GV+V + +G A HS
Sbjct: 20 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL 79
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++T + +WG E GQLG G+T PK++ E +++ + CG T A++
Sbjct: 80 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLI----EVLSKEVIVSAACGRNHTLALT 134
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 145 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 198
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V DSG ++ G
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 257
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 258 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 314
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 315 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 362
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 148/356 (41%), Gaps = 49/356 (13%)
Query: 43 TDGQLGTGRLHDELSPQLLNLS------SLSSVSMLACGGAHVLALTSP--------SSV 88
T G T R+ +EL P S +LSS+ ML G + +L S + V
Sbjct: 18 TKGLPRTVRMEEEL-PLFCGYSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACV 76
Query: 89 IGG------------KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
GG ++F G G LG G++ + P+ + G + +G
Sbjct: 77 FGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-P 135
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLK 195
H + G +FT G + QLG+G P +S+ NK V ++ACG HSLVL
Sbjct: 136 HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 195
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
D +V+ +G GQ+G S + + +VT L + +V I+ A+ G
Sbjct: 196 D---GEVFAWGYNNSGQVG-SGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGE 251
Query: 256 LYTWGR--------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307
+Y WG G + C + + + A G+ H LVLT +G+V G +
Sbjct: 252 VYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 311
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+G L + + + P V +EK ++I+IAA SA T+ + WG
Sbjct: 312 YGQLGTGNKSNQSYPTPVTVEK------DRIIEIAACHSTHTSAAKTQGGHVYMWG 361
>gi|321478150|gb|EFX89108.1| hypothetical protein DAPPUDRAFT_304662 [Daphnia pulex]
Length = 353
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 63/394 (15%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDELS-------PQLLNLSSLSSVSMLACGGAHVLALTSPS 86
+++++WG + GQLG G + LS P+ L S++ +A GG H + ++
Sbjct: 1 MQLFTWGTNSHGQLGQGFESELLSVPTAAHIPEELQ-QSIAYNCQIAGGGNHSIVTSN-- 57
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G+V++ G +SGQ+ E A + G +T ++ GW+ + F++ +G
Sbjct: 58 ----GRVWAAGLDNSGQICSTEKKSASVFSEIHALAG--CNVTSVACGWDFTLFLASNGN 111
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD-CLGNQVYGF 205
L+ CG TF QLG + + + + + S ++ Q++ G+RH+ + CL Q++G
Sbjct: 112 LYGCGSNTFHQLGITN-KVVNGLINLHSLDHEPFVQVSAGLRHAAAVTNTGCL--QIWG- 167
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRS-AALSAEGHLYTWGR--- 261
+ + L D+ V ++ G R AL+ + L WG
Sbjct: 168 -------------------IEKYVKQLTDVSGVVKASCGQRHIVALTTKNKLLAWGGNNH 208
Query: 262 ---GFNSTSDVNCPQSLPSSLSFSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSD 313
G NST+ + + L S + GW H LVLT +V G + +G L
Sbjct: 209 GQCGQNSTTTKHIKEPLSIEWDESNGRIENVVSGWTHSLVLTDRQQVYSWGRNTYGQLGR 268
Query: 314 PERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
+S P +++ L+G+ +I AAG+EHS + + + TWGW EHG LG GNT
Sbjct: 269 ASYDNSFLP-----KRIPELEGITLI--AAGSEHSMALDKFGQLWTWGWNEHGSLGNGNT 321
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
+Q P VN+ F R + G+G ++AI
Sbjct: 322 ENQFRP--VNISHYFPGRIQSIGT--GAGHSFAI 351
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGG 91
K+ +WG GQ G + + L++ S + + G H L LT
Sbjct: 199 KLLAWGGNNHGQCGQNSTTTKHIKEPLSIEWDESNGRIENVVSGWTHSLVLTDRQ----- 253
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+SWGR + GQLG ++ PK + +G IT I+AG HS + G L+T G
Sbjct: 254 QVYSWGRNTYGQLGRASYDNSFLPKRIPELEG----ITLIAAGSEHSMALDKFGQLWTWG 309
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
G LG+G+ + PV +S + + I G HS +++
Sbjct: 310 WNEHGSLGNGNTENQFRPVNISHYFPGRIQSIGTGAGHSFAIVE 353
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 23 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 83 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 313 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 340
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 157 ELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D +V+ FGSGK GQL
Sbjct: 270 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 327
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + LP ++++ ++ + + W + NS VN +
Sbjct: 328 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 385
Query: 274 SLPS 277
++P+
Sbjct: 386 TIPT 389
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + S + PQ+ L + +
Sbjct: 137 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGRT-FPSTTTPQIVEHLAGVPL 192
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL +L + A G
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGG 251
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 306
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 307 LAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 28/254 (11%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHR 125
+ + CG H LAL+ GG++F+WG+ GQLG G + P+ V G
Sbjct: 137 KKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAG-- 189
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G FGQLG G S SP + + N+ V +AC
Sbjct: 190 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLAC 249
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G HS +L +D L ++ FG+GK GQLG +++ +R + ++ +G +I
Sbjct: 250 GGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGR 303
Query: 244 GDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
A +S G ++++G G + T D P LP +S S+ +H T +
Sbjct: 304 WHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSE 357
Query: 298 GEVLMLGGSHHGML 311
E++M+ G + +L
Sbjct: 358 KELIMIAGGNQSIL 371
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L D GK + S +RS S+ L + +
Sbjct: 96 NMKIHSVDQGADHMLILSSD-----------GKPFEYDYSMKHLRSESI------LQEKK 138
Query: 237 IVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAAL 286
I+ I+ S ALS G L+ WG R F ST+ + L + + +Q +
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHL-AGVPLAQISA 197
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ G + G + G L S P + LD KV +A G
Sbjct: 198 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-----SLIEALDNQKVEFLACGGS 252
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HSA++T++ + T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 253 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGNRVTQIA--CGRWHTLA 308
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
QI C R VL + G QV+ +G G P+ +++I +
Sbjct: 54 RQICCSPRRLAVLERGGAGVQVHQVLAGSGG-----------ARTPKCIKLGKNMKIHSV 102
Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
D LS++G + + +S+ Q G H L L+ GE+
Sbjct: 103 DQGADHMLILSSDGKPFEYDYSMKHLRS----ESILQEKKIIQITCGDYHSLALSKGGEL 158
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + HG L V T P + + V +L GV + QI+AG HS ++ + I +W
Sbjct: 159 FAWGQNLHGQLG----VGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 214
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGD 386
G E GQLGLG+T + P ++ D
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALD 240
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 23 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQAWVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 83 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 313 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 340
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 126/257 (49%), Gaps = 25/257 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 136 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 189
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ T+ +I+ G S V D+G ++ G
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-TVVNIACGQMCSMAVVDTGEVYVWGY 248
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P ++++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 305
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
LG +S P + IEI + SAA + GH+Y WG RG
Sbjct: 306 LGTGNKSNQSYPTPVIVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQCRGQSVTLPHL 364
Query: 263 --FNSTSDVNCPQSLPS 277
F+ST DV + P+
Sbjct: 365 THFSSTDDVFACFATPA 381
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 22/286 (7%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ + ++F G G LG G++ + P+ + G + +G H + G
Sbjct: 78 TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHVVLATTEGE 136
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+FT G + QLG+G P +S+ NK V ++ACG HSLVL D +V+ +
Sbjct: 137 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 193
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS 265
G GQ+G + + +VT L + +V I+ S A+ G +Y WG N
Sbjct: 194 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNG 252
Query: 266 --------TSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
C + + + A G+ H LVLT +G+V G + +G L +
Sbjct: 253 QLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 312
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ + P V +EK ++I+IAA A SA T+ + WG
Sbjct: 313 NQSYPTPVIVEK------DRIIEIAACHSAHTSAAKTQGGHVYMWG 352
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
HV++ T +GEV G + + L + P ++ +NL +VI++A G+ HS
Sbjct: 127 HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHIS----TNLSNKQVIEVACGSYHSL 182
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAI 407
V+T + + WG+ GQ+G G+T +Q P+ V QN+ T + + CG + A+
Sbjct: 183 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT--GCLQNK-TVVNIACGQMCSMAV 237
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G ++ P+ VT ++ +T I+ G V DSG ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S I
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTINQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 308 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+SWG G DG+LG G P+L+ + +ACGG H A+TS G +++
Sbjct: 35 VYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITS-----AGWLYT 89
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG+G G+LGHG+ D L PK V ++ +G + V+D +++ GDG +
Sbjct: 90 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G+LG G P+K+ S V ++ CG + S+ L + VY +G G +LG
Sbjct: 150 GKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTR---SGAVYTWGKGDYHRLGH 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
D V P+ L +I+ I+ A S +G ++TWG
Sbjct: 207 GTD--DHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWG 249
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 132/295 (44%), Gaps = 27/295 (9%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
++ GG H +AL+S G V+SWG G G+LGHG V Y +P D I I
Sbjct: 19 VSSGGKHCIALSSE-----GHVYSWGEGDDGKLGHGNKVS--YDRPKLIEDLLGVEIVDI 71
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RH 189
+ G +HS ++ +G L+T G G +G+LGHGD P V + + V +ACG
Sbjct: 72 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQ 131
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+L + D + V+ +G G G+LG + +P L + +V + S A
Sbjct: 132 TLCVTDD---DNVWSWGDGDYGKLG--RGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVA 186
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL 301
L+ G +YTWG+ G + V P+ + + A G H + + GEV
Sbjct: 187 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 246
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G + G L D + RP V L G K+ ++A G+ H+ + +A
Sbjct: 247 TWGDNDEGQLGDGTTSALHRP-----RLVHALQGKKITRVACGSAHTLAWSTAKA 296
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 28/290 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S+G H +S G +++ G+G G+LGHG+ S+ P + + + IACG HS
Sbjct: 19 VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 78
Query: 191 LVLLKDCLGNQVYGFGSGKRGQL--GVSKDRIRSVSLPQVTIGLHDIEIVGISA-NGD-R 246
+ +Y +G G+ G+L G S D++R P+V L D +++ ++ +GD +
Sbjct: 79 AAITS---AGWLYTWGKGRYGRLGHGDSDDQLR----PKVVEALQDYKVIDVACGSGDAQ 131
Query: 247 SAALSAEGHLYTW--------GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
+ ++ + ++++W GRG + V + L + G + LT G
Sbjct: 132 TLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSG 191
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
V G + L RP KV+ L G K+I IA G+ H ++ +
Sbjct: 192 AVYTWGKGDYHRLGHGTDDHVRRP-----RKVAALQGKKIISIATGSLHCVACSDKGEVF 246
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
TWG + GQLG G T P++V+ Q + V CGS T A S
Sbjct: 247 TWGDNDEGQLGDGTTSALHRPRLVH---ALQGKKIT-RVACGSAHTLAWS 292
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 18 NNAKPKIEEEEEEQQVV------------------KVWSWGAGTDGQLGTGRLHDELSPQ 59
+ +PK+ E ++ +V+ VWSWG G G+LG G P
Sbjct: 105 DQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVP- 163
Query: 60 LLNLSSLSS--VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
L + SL+ V + CG +ALT G V++WG+G +LGHG P+
Sbjct: 164 -LKIDSLAGLGVVKVECGSQFSVALTR-----SGAVYTWGKGDYHRLGHGTDDHVRRPRK 217
Query: 118 VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
V G + I I+ G H SD G +FT GD GQLG G + P V +
Sbjct: 218 VAALQGKK--IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQG 275
Query: 178 KNVHQIACGMRHSL 191
K + ++ACG H+L
Sbjct: 276 KKITRVACGSAHTL 289
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 53/168 (31%)
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
I+ V +S+ G ALS+EGH+Y+WG G
Sbjct: 14 IKKVAVSSGGKHCIALSSEGHVYSWGEG-------------------------------- 41
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
DG+ LG HG +VS RP + + +L GV+++ IA G HSA +T
Sbjct: 42 -DDGK---LG---HG-----NKVSYDRP-----KLIEDLLGVEIVDIACGGHHSAAITSA 84
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
+ TWG G +G+LG G++ DQ+ PKVV +++ ++V CGSG
Sbjct: 85 GWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK----VIDVACGSG 128
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 157 ELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK--VEFLACGGSHSALLTQDGLLFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D +V+ FGSGK GQL
Sbjct: 270 KHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDF--GKVFSFGSGKDGQL 327
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G + + LP ++++ ++ + + W + NS VN +
Sbjct: 328 GNGGTLDQLIPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 385
Query: 274 SLPS 277
++P+
Sbjct: 386 TIPT 389
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + S + PQ+ L + +
Sbjct: 137 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGRT-FPSTTTPQIVEHLAGVPL 192
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL +L + A G
Sbjct: 193 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-SLIEALDNQKVEFLACGG 251
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 252 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGNRVTQIACGRWHT 306
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 307 LAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 28/254 (11%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA-LYPKPVTFFDGHR 125
+ + CG H LAL+ GG++F+WG+ GQLG G + P+ V G
Sbjct: 137 KKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAG-- 189
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
+ ISAG HS +S SG +++ G FGQLG G S SP + + N+ V +AC
Sbjct: 190 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLAC 249
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLPQVTIGLHDIEIVGISAN 243
G HS +L +D L ++ FG+GK GQLG +++ +R + ++ +G +I
Sbjct: 250 GGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVAEL-VGNRVTQIA--CGR 303
Query: 244 GDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD 297
A +S G ++++G G + T D P LP +S S+ +H T +
Sbjct: 304 WHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP--LPVKVSSSEELKLESH----TSE 357
Query: 298 GEVLMLGGSHHGML 311
E++M+ G + +L
Sbjct: 358 KELIMIAGGNQSIL 371
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 177 NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIE 236
N +H + G H L+L D GK + S +RS S+ L + +
Sbjct: 96 NMKIHSVDQGADHMLILSSD-----------GKPFEYDYSMKHLRSESI------LQEKK 138
Query: 237 IVGISANGDRSAALSAEGHLYTWG----------RGFNSTSDVNCPQSLPSSLSFSQAAL 286
I+ I+ S ALS G L+ WG R F ST+ + L + + +Q +
Sbjct: 139 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHL-AGVPLAQISA 197
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE 346
G H + L+ G + G + G L S P + LD KV +A G
Sbjct: 198 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSP-----SLIEALDNQKVEFLACGGS 252
Query: 347 HSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
HSA++T++ + T+G G+HGQLG +T +++ P +V + NR TQ+ CG T A
Sbjct: 253 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV--AELVGNRVTQIA--CGRWHTLA 308
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGI 240
QI C R VL + G QV+ +G G P+ +++I +
Sbjct: 54 RQICCSPRRLAVLERGGAGVQVHQVLAGSGG-----------ARTPKCIKLGKNMKIHSV 102
Query: 241 SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEV 300
D LS++G + + +S+ Q G H L L+ GE+
Sbjct: 103 DQGADHMLILSSDGKPFEYDYSMKHLRS----ESILQEKKIIQITCGDYHSLALSKGGEL 158
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + HG L V T P + + V +L GV + QI+AG HS ++ + I +W
Sbjct: 159 FAWGQNLHGQLG----VGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSW 214
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGD 386
G E GQLGLG+T + P ++ D
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALD 240
>gi|198475401|ref|XP_002132905.1| GA25299 [Drosophila pseudoobscura pseudoobscura]
gi|198138806|gb|EDY70307.1| GA25299 [Drosophila pseudoobscura pseudoobscura]
Length = 379
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 178/410 (43%), Gaps = 71/410 (17%)
Query: 34 VKVWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSS--VSMLACGGAHVLALTSPSSVI 89
++V++WGA + GQLG G EL +PQ L S + V + GG HVL L +
Sbjct: 1 MEVFAWGANSHGQLGLG-FESELCMTPQRLTRHSFAPQLVRCIRGGGGHVLVLDT----- 54
Query: 90 GGKVFSWGRGSSGQLG---HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
G+V + G + GQLG E + P +F+ I +S GW+ SG ++ +
Sbjct: 55 SGRVHACGWNNRGQLGLDSTEECHNEFQMIPSEYFE--EVPIETVSCGWDISGGITLTKR 112
Query: 147 LFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYG 204
LF G F QLG + + P+ V + I+ G+RH VL +D +++Y
Sbjct: 113 LFVWGSNAFQQLGICQRGFMAVRRPLPVRLPKEEPALAISFGLRHCAVLTQD---HKIYV 169
Query: 205 FGSGKRGQLGVSKDRIRSVSLPQVTIG-----LHDIEIVGI---SANGDRSAALSAEGH- 255
FG R+R + P + + LH + I + N R ALS+ H
Sbjct: 170 FG------------RLRVMDPPPIELDITATTLHRCNTMKIQVHNPNELRIVALSSGQHH 217
Query: 256 -------LYTWG---RGFNSTSDVNCPQSLPSSLSFS----QAALGWNHVLVLTGDGEVL 301
L G + S D QS ++ F Q A+GW H L + E+L
Sbjct: 218 MLLKCVDLTQEGGSTKRILSLGDNKFGQS--NAFLFEEDVRQLAVGWTHNAALLRNNEIL 275
Query: 302 MLGGSHHGML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
M G + +G L S E+ + +PLS+ L DG ++ GAEH + T I
Sbjct: 276 MWGRNCYGQLGTGSISEQQAVPQPLSLRLP-----DGQTPARVHMGAEHGLLRTTAGEIY 330
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
TWGW EHG G +T + P +V + + GSGF YAIS
Sbjct: 331 TWGWNEHGNCGNNSTENVYSPTLVEIPGRVKLAGA------GSGFCYAIS 374
>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 491
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 133/290 (45%), Gaps = 19/290 (6%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALY-PKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149
G+VF+ G SS GH + ++ P+ V +G +S G N S F++ G ++T
Sbjct: 182 GQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNG--IPCKQVSVGHNFSVFLTRQGHVYT 239
Query: 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
CG T+GQLGHG+ +P V V +V QIA G + L ++ D +VY FGSG
Sbjct: 240 CGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVND---GRVYSFGSG 296
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
LG + T L +I +V +SA + + AL + G +YTWG+G+
Sbjct: 297 SNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALG 356
Query: 264 -NSTSDVNCPQ---SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
D PQ SL + L+ Q VL G V G G L P+R S
Sbjct: 357 HGDEIDKTIPQPLNSLKNHLAV-QVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVS 415
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
+ L + +L +V QI+ G H+ VVTE I +G E QLG
Sbjct: 416 DKVLRP--RSLDSLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLG 463
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSM--LACGGAHVLALTSPSSVIGGK 92
+V+S+G+G++ LG G H+E P++L L ++ + ++ G H +AL S G
Sbjct: 289 RVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDS-----NGL 343
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
V++WG+G G LGHG+ +D P+P+ H + A + + D+G ++ G
Sbjct: 344 VYTWGKGYCGALGHGDEIDKTIPQPLNSLKNH--LAVQVCARKRKTFVLVDTGIVYGFGW 401
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVH---QIACGMRHSLVLLKDCLGNQVYGFGSGK 209
FG LG D ++ S + VH QI+ G+ H++V+ + +++GFG +
Sbjct: 402 MGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEK---GKIFGFGDNE 458
Query: 210 RGQLGVSKDRIRSVSLPQVTIGLHDIE 236
R QLG + +R P I +HD++
Sbjct: 459 RAQLG--HESLRGCLEP-TEIFIHDLD 482
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++ G T GQLG G + +P+++ L + SV +A G ++VLA+ + G+V+
Sbjct: 237 VYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVND-----GRVY 291
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G GS+ LGHGE + P+ + F + +SAG H+ + +G ++T G G
Sbjct: 292 SFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGY 351
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
G LGHGD + P ++S N Q+ R + VL+ + VYGFG G LG
Sbjct: 352 CGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGI---VYGFGWMGFGSLG 408
Query: 215 V-------------SKDRIRSVSLPQVTIGLHDIEIV 238
S D +R + Q++ GL+ +V
Sbjct: 409 FPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVV 445
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 132/350 (37%), Gaps = 80/350 (22%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+A G H L +++ G V+S G G LGHG F Y + +
Sbjct: 116 IATGRYHTLLISN------GSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIY-VEQV 168
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
SA NH+ FV+ SG +FTCGD SSF CG R
Sbjct: 169 SASHNHAAFVTQSGQVFTCGDN-------------------SSF--------CCGHR--- 198
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
D + P++ L+ I +S + S L+
Sbjct: 199 --------------------------DTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLT 232
Query: 252 AEGHLYTWGR------GFNSTSDVNCP---QSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
+GH+YT G G +T + P Q L S Q A G ++VL + DG V
Sbjct: 233 RQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYS 292
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G + L E+ + +P + ++ N + V+ ++AG EH+ + N + TWG
Sbjct: 293 FGSGSNFCLGHGEQHNEFQPRVLQTFRLKN---IHVVSVSAGDEHAVALDSNGLVYTWGK 349
Query: 363 GEHGQLGLGNTCDQIHPKVVN-----LGDEFQNRDTQLEVFCGSGFTYAI 407
G G LG G+ D+ P+ +N L + R + V +G Y
Sbjct: 350 GYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGF 399
>gi|345788246|ref|XP_003433049.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
nucleotide exchange factor [Canis lupus familiaris]
Length = 461
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 128/288 (44%), Gaps = 25/288 (8%)
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G S GQLG G D L P+ + F I I+ G HS V+D G LF CG G
Sbjct: 19 GANSYGQLGLGHKEDVLLPQQLDDF-CKPECIRRITGGGGHSAVVTDGGSLFVCGLNKDG 77
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
QLG G S + + Q+ACG +++L + QV GS GQLGV
Sbjct: 78 QLGLGHTEDVLYFTSCRSLLGCPIQQVACGWDFTIILTES---GQVLSCGSNSFGQLGVP 134
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
+ R V +PQ I L +V ++A + A +A G ++ WG G S+ CP Q+L
Sbjct: 135 QGPRRCV-VPQA-IELLRERVVCVAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTL 192
Query: 276 PSSLSFSQAA--------------LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P L+ + + G +H LT GE+ + G + HG L+ +++
Sbjct: 193 PPFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLAS---LAAFL 249
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P +E KV + +G H TE + TWG ++GQLG
Sbjct: 250 PKPQKIE-AHCFQNEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLG 296
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 165/396 (41%), Gaps = 41/396 (10%)
Query: 40 GAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGR 98
GA + GQLG G D L PQ L+ + + GG H +T GG +F G
Sbjct: 19 GANSYGQLGLGHKEDVLLPQQLDDFCKPECIRRITGGGGHSAVVTD-----GGSLFVCGL 73
Query: 99 GSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL 158
GQLG G D LY G I ++ GW+ + +++SG + +CG +FGQL
Sbjct: 74 NKDGQLGLGHTEDVLYFTSCRSLLG--CPIQQVACGWDFTIILTESGQVLSCGSNSFGQL 131
Query: 159 GHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----SGKRGQL 213
G + + + V +A G+RH+L V+ +G SG+R
Sbjct: 132 GVPQGPRRCVVPQAIELLRERVVCVAAGLRHALAATAS---GTVFQWGTGLASSGRRLCP 188
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNS-----TSD 268
G + + P GL + + + A D SA+L+ G LY WG + +
Sbjct: 189 GQTLPPFLTAKEPSRVTGLENSKATCVLAGSDHSASLTDAGELYVWGSNKHGQLASLAAF 248
Query: 269 VNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGMLS---------DPE 315
+ PQ + + ++ GW H++ T G+V G + +G L
Sbjct: 249 LPKPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGKVFTWGRADYGQLGRQLESHEDWKAR 308
Query: 316 RVSSTRPLSVALEKV-SNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT 373
S+ P S + + S+L + +++ G+EH+ V +WGW EHG G G+
Sbjct: 309 NQDSSFPCSGPQKSMPSSLRCLTGAAEVSCGSEHNLAVIGG-TCYSWGWNEHGMCGDGSE 367
Query: 374 CDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V E L V CG+G + A+ +
Sbjct: 368 ANVWAPKPV----EALRSSRGLLVGCGAGHSLALCQ 399
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 22/116 (18%)
Query: 35 KVWSWGAGTDGQLG---------TGRLHDELSP-------QLLNLSSLSSVSMLACGGAH 78
KV++WG GQLG R D P +L L+ + ++CG H
Sbjct: 283 KVFTWGRADYGQLGRQLESHEDWKARNQDSSFPCSGPQKSMPSSLRCLTGAAEVSCGSEH 342
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
LA VIGG +SWG G G G + PKPV R + AG
Sbjct: 343 NLA------VIGGTCYSWGWNEHGMCGDGSEANVWAPKPVEALRSSRGLLVGCGAG 392
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G ++ P+ VT ++ +T I+ G V DSG ++ G
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDSGEVYVWGY 236
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 23 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + G + +G H + G +FT G + QLG+G
Sbjct: 83 LGLGDVQSTIEPRRLDSLSGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S I
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTINQ 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 313 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 340
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T +S G H+ V+ + L+ G +GQLG G + S P V + + V ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV + G +VY G GQLG+ RS + ++ +I +SA + SA
Sbjct: 98 HTLVSTE---GGKVYAAGGNNEGQLGLGDTEERS-TFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL+ +G L+ WG G + ++V PQ + S + G+ H +T +G++
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L P ++ + + V + G KV+Q+A G H+ V+TE +A+ T+G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMP---QPVPGIPG-KVVQVACGGGHTVVLTE-KAVYTFGL 268
Query: 363 GEHGQLGLG 371
G+ GQLGLG
Sbjct: 269 GQFGQLGLG 277
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + Q+Y FG + G+LG
Sbjct: 169 EGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GQLYTFGEPECGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FNSTS------ 267
+ + + +PQ G+ ++V ++ G + L+ E +YT+G G F
Sbjct: 224 LPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 281
Query: 268 DVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ + P+++ S A G NH ++T G + G HG L
Sbjct: 282 ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKL 327
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 152/331 (45%), Gaps = 49/331 (14%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--------VDALYPKPVTFF 121
+ L+CG H +T K++ +G + GQLG G V AL P+ V F
Sbjct: 38 TFLSCGDEHTAVVTG-----NNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF- 91
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNV 180
+ G NH+ ++ G ++ G GQLG GD S+ +S F + + +
Sbjct: 92 ---------AACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKI 142
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVG 239
Q++ G S L +D +++ +G GQ+G+ + + +V +PQ VT+G I
Sbjct: 143 KQLSAGSNTSAALTED---GELFMWGDNSEGQIGL--ENVTNVCVPQQVTVGKP---ISW 194
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSL-SFSQAALGWNH 290
IS SA ++ EG LYT+G G + VN PQ +P Q A G H
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+VLT + V G G L + T + A+E + + K+ IA G H+A+
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQ---KISFIACGENHTAL 309
Query: 351 VTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
+T+ + T+G G HG+LGLG N+ +Q P
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYT 127
V +ACGG H + LT + V+++G G GQLG G + + PK + +
Sbjct: 245 VVQVACGGGHTVVLTEKA------VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK-- 296
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIAC 185
I+ I+ G NH+ ++D G ++T GDG G+LG G S + P S+F+ V ++C
Sbjct: 297 ISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSC 356
Query: 186 GMRHSLVLLKDCLG 199
G H+LV LG
Sbjct: 357 GGCHTLVFATPRLG 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 240 ISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALGWN 289
+S + +A ++ LY WG+ G S S V+ P + P + F AA G N
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF--AACGRN 97
Query: 290 HVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H LV T G+V GG++ G L D E S+ +S + K+ Q++AG+
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR------KIKQLSAGSNT 151
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
SA +TE+ + WG GQ+GL N + P+ V +G
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
Length = 1025
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 41/349 (11%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSS 87
E + +++SWG+G + QLGTG H + P ++ + + ++ H +A+++
Sbjct: 148 ERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSA--- 204
Query: 88 VIGGKVFSWGRGSSGQLGHGEM------VDALYPKPVTFFDGHRYTITHISAGWNHSGFV 141
G+V++WG G G+LGH E + P+ VT G R + I+A +H+
Sbjct: 205 --RGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRR-VKAIAAAKHHTVVA 261
Query: 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201
++ G +FT G GQLG+ + P +VSS +K V +A +H+ V+ + +
Sbjct: 262 TEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-AVAAANKHTAVISE---SGE 317
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
V+ +G K+GQLG S P+V L + G++A + L A+G ++TWG
Sbjct: 318 VFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGH 377
Query: 262 GFNSTSDV----NCPQSLPSSLSFSQA------ALGWNHVLVLTGDGEVLMLGGSHHGML 311
+ V N ++ + L F Q A G H + LT DG + + +
Sbjct: 378 RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIF------YWVS 431
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
SDP+ + ++V +L G V I+AG A VT + W
Sbjct: 432 SDPD---------LRCQQVYSLCGRTVSSISAGKYWIAAVTATGDVYMW 471
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
+D + +++ +GSG QLG I+ LP LH I +SA S A+SA G
Sbjct: 149 RDSVATELFSWGSGVNYQLGTGNTHIQK--LPCKVDSLHGTFIKSVSAAKFHSVAVSARG 206
Query: 255 HLYTWGRG------------FNSTSDVNCPQSLPSSL---SFSQAALGWNHVLVLTGDGE 299
+YTWG G + + V P+ + L A +H +V T GE
Sbjct: 207 EVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGE 266
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
V G + G L T+P+ +VS+L K++ +AA +H+AV++E+ + T
Sbjct: 267 VFTWGSNREGQLG--YTSVDTQPIP---RRVSSLKS-KIVAVAAANKHTAVISESGEVFT 320
Query: 360 WGWGEHGQLGLG--NTCDQIHPKVVN 383
WG + GQLG G N+ P+VV
Sbjct: 321 WGCNKKGQLGYGTSNSASNYTPRVVE 346
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 95/229 (41%), Gaps = 22/229 (9%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
LF+ G G QLG G+ P KV S + ++ HS+ + +VY +G
Sbjct: 156 LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAV---SARGEVYTWG 212
Query: 207 SGKRGQLGVSKDRIRS-----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
G+ G+LG + I S ++ QVT+GL + I+A + + G ++TWG
Sbjct: 213 FGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGS 272
Query: 262 ------GFNSTSDVNCPQSLPSSLSFSQAALGWN-HVLVLTGDGEVLMLGGSHHGMLS-- 312
G+ S P+ + S S A N H V++ GEV G + G L
Sbjct: 273 NREGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYG 332
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
S+ P V K L GV AA H+ V+ + I TWG
Sbjct: 333 TSNSASNYTPRVVEYLKGKVLKGV-----AAAKYHTIVLGADGEIFTWG 376
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 23 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 83 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 313 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 340
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 177
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 236
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 237 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 293
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 294 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 23 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 82
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 83 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 141
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 142 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 257
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 258 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 312
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 313 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 340
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 125/257 (48%), Gaps = 25/257 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 148
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ + +I+ G S V ++G +F G
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVNTGEVFVWGY 207
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG--RG-------- 262
LG +S P V IEI + SAA + GH+Y WG RG
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQCRGQSVTLPHL 323
Query: 263 --FNSTSDVNCPQSLPS 277
F+ST DV + P+
Sbjct: 324 THFSSTDDVFACFATPA 340
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 22/286 (7%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ + ++F G G LG G++ + P+ + G + +G H + G
Sbjct: 37 TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSG-PHIVLATTEGE 95
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+FT G + QLG+G + P +S+ NK V ++ACG HSLVL D +V+ +
Sbjct: 96 VFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G GQ+G + + +VT L + +V I+ S A+ G ++ WG
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + C + + + A G+ H LVLT +G+V G + +G L +
Sbjct: 212 QLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ + P V +EK ++I+IAA A SA T+ + WG
Sbjct: 272 NQSYPTPVVVEK------DRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F G G LG GD +S P ++ S K + ++ G +VL +V+ +G
Sbjct: 43 IFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATT--EGEVFTWG 100
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
QLG V ++ L + +++ ++ S L+++G ++ WG
Sbjct: 101 HNAYSQLGNGTTNAGLVPY-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159
Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G ST++ P+ + L A G + + GEV + G + +G L
Sbjct: 160 VGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSG 219
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ P +V+ L G++V ++A G H+ V+T+ + WG +GQLG GN +Q
Sbjct: 220 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 274
Query: 378 HPKVV 382
+P V
Sbjct: 275 YPTPV 279
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 155/325 (47%), Gaps = 39/325 (12%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFD-GHRYTITHISAGWNHSGFVSDSGCLFTCG 151
++S+G+ S G+LG D PKP++ + +T +IS+G +HS V+ +G L+ G
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSG 227
Query: 152 DGTFGQLGHGDYRSH--SSPVKVSSF----VNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
G+LG S +V+ F VN+ V Q+ACG H+L L++D QV+ +
Sbjct: 228 SQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQD---GQVFAW 284
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG--- 262
G ++G K+ + P++ GL +IV I S AL +G +Y+WG G
Sbjct: 285 GGTLHKKVG-EKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGAS 343
Query: 263 FN-------STSDVNCPQSLP--SSLSFSQAALGWNHVLVL-TGDGEVLMLGGSHHGMLS 312
+N + D+ P + + Q + G H L L D E+ G +G
Sbjct: 344 YNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYGECG 403
Query: 313 DPERVSSTRPLSVALEK--VSNLDGVK-------------VIQIAAGAEHSAVVTENRAI 357
E +S++P V + K VSN + + + QI+AG H+ ++T +
Sbjct: 404 LGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRV 463
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVV 382
++G+G HGQLGL +T + P++V
Sbjct: 464 YSFGYGSHGQLGLRSTKNFCSPQLV 488
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 174/393 (44%), Gaps = 59/393 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGKV 93
+WS+G +DG+LG D+ P+ +++ +L S + G+H A+ + + G++
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKA----GEL 223
Query: 94 FSWGRGSSGQLG----HGEMVDALYPKPVTFFDGHRYT--ITHISAGWNHSGFVSDSGCL 147
+ G G+LG +G V VT FDG + + ++ G H+ + G +
Sbjct: 224 YVSGSQLHGKLGIQSVNGMHVSKF--TQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQV 281
Query: 148 FTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
F G ++G + ++ ++ P VS K + I CG HS+ L D G +VY +G
Sbjct: 282 FAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVAL--DIQG-RVYSWG 338
Query: 207 SG----KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYTWGR 261
G +GQ G + + P G+ +IV ISA G + AL E LY WG
Sbjct: 339 GGGASYNKGQCGHGNNE--DIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGS 396
Query: 262 G---------FNSTSD---VNCPQSLPSS---------LSFS-------QAALGWNHVLV 293
G F ++S V P+ S+ +FS Q + G +H L+
Sbjct: 397 GTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLL 456
Query: 294 LTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353
LT G V G HG L + ST+ + + V +L + IAAG HS ++++
Sbjct: 457 LTSRGRVYSFGYGSHGQLG----LRSTKNF-CSPQLVKDLLSKNIKAIAAGWNHSLILSD 511
Query: 354 NRAIMTWGWGEHGQLGLGNTCDQIH-PKVVNLG 385
+ G+G HGQLGL + + V NLG
Sbjct: 512 KGDLFACGYGNHGQLGLNDKEPRTQFTHVANLG 544
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP----------------QLLNLSSLSS----VSMLAC 74
++++WG+GT G+ G G P Q+ N + SS ++ ++
Sbjct: 390 ELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISA 449
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H L LTS G+V+S+G GS GQLG + P+ V D I I+AG
Sbjct: 450 GGHHTLLLTS-----RGRVYSFGYGSHGQLGLRSTKNFCSPQLVK--DLLSKNIKAIAAG 502
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLL 194
WNHS +SD G LF CG G GQLG D + V++ KN + I G HS V++
Sbjct: 503 WNHSLILSDKGDLFACGYGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWVVI 562
Query: 195 KDCL 198
D +
Sbjct: 563 DDLM 566
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 308 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 148
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 207
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 208 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 22/286 (7%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ + ++F G G LG G++ + P+ + +G + +G H + G
Sbjct: 37 TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGE 95
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+FT G + QLG+G P +S+ NK V ++ACG HSLVL D +V+ +
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G GQ+G S + +VT L + +V I+ A+ G +Y WG
Sbjct: 153 GYNNSGQVG-SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 211
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + C + + + A G+ H LVLT +G+V G + +G L +
Sbjct: 212 QLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ + P V +EK ++I+IAA SA T+ + WG
Sbjct: 272 NQSYPTPVTVEK------DRIIEIAACHSTHTSAAKTQGGHVYMWG 311
>gi|209875367|ref|XP_002139126.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209554732|gb|EEA04777.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 1864
Score = 103 bits (258), Expect = 1e-19, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 38/314 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG T+ LG G D++ P + S+ V ++CG H L + GGKV
Sbjct: 59 QLYAWGENTNNVLGFGIDTDKVDLPTRVPFFSIYDVFQVSCGYLHTAVLIKSITESGGKV 118
Query: 94 FSWGRGSSGQLGHG----------EMVD------ALYPKPVTFFDGHRYTITHISAGWNH 137
++ G G+ G+LG+ E +D ++ P V F + I+ I G NH
Sbjct: 119 YTMGLGNRGRLGYTRSDTEFGLEEEYLDKNESWYSISPCIVKFPSNTK--ISRICCGANH 176
Query: 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK-NVHQIACGMRHSLVLLKD 196
+ +SD+G L++ G G FG LG G P K+ N V IA G RHSL ++
Sbjct: 177 TLALSDNGHLYSWGVGQFGCLGTGSTEDVFFPTKIEISNNSLKVQHIAAGSRHSLCCTEN 236
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSL-PQVTIGLHDIEIVGISANGDRSAALSAEGH 255
GN ++ +GS G+LG+ + + L P + + + + S + G
Sbjct: 237 --GN-LFAWGSNANGRLGIGG--VNGIKLKPTIVQSMLPYHVCFVVTGEAHSGCIDRMGI 291
Query: 256 LYTWGRGFNST----SDVNCPQSLP------SSLSFSQAALGWNHVLVLTGDGEVLMLGG 305
++TWG G N ++CP +P SS+ F Q A G + LT G+V + G
Sbjct: 292 VFTWGNGSNGQLGHGLQLDCP--IPRKVHGISSIPFVQLAFGAFISMGLTQSGDVYIWGS 349
Query: 306 SHHGMLSDPERVSS 319
H + S P +V S
Sbjct: 350 KQHEIFSTPTKVKS 363
Score = 89.0 bits (219), Expect = 4e-15, Method: Composition-based stats.
Identities = 98/381 (25%), Positives = 159/381 (41%), Gaps = 61/381 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDEL------------SPQLLNLSSLSSVSMLACGGAHVLALT 83
V++WG + GQLG G LH +L P + S + +ACG H L
Sbjct: 510 VYTWGDNSYGQLGIGSLHRDLGETSNKNKTFVSEPNEVKFSG--PIRRVACGYWHTLCCD 567
Query: 84 SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP-------KPVTFFDGHRYTITHISAGWN 136
G F+WGRG GQLG G + + P + + G Y+ I+ G
Sbjct: 568 -----YSGNCFTWGRGDYGQLGTGAICNMYEPVGIISLNNVIDVYGGESYSACIIATGIT 622
Query: 137 HSGFVS--DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLV 192
S + +SG L+ G+G FG+LG GD + + ++N + +++ G H+L
Sbjct: 623 ISKDLDTINSGDLWIWGNGDFGKLGLGD-DVNGKCIAAPRYLNLGYPIVKVSLGTVHTLA 681
Query: 193 LLKDCLGNQVYGFGSGKRGQLGV----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
L + GN + +G+G G+LGV + +R + P + D+ I I+ D S
Sbjct: 682 LTAN--GNLI-TWGAGYYGRLGVGTTNNHNRPIIIKFP-----IGDVRISDIAVGTDHSM 733
Query: 249 ALSAEGHLYTWGRG---FNSTSDVNCPQ---SLPSSLSFSQAALGWNHVLV---LTGDGE 299
A+S +G L+ WG+ N T DV P L S+ + + H + +T GE
Sbjct: 734 AVSVDGDLWIWGKASVVLNET-DVLQPHIFAKLESATGVPKVYSVYAHADISYAITNTGE 792
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV----KVIQIAAGAEHSAVVTENR 355
+ G D ++ + + V V ++ G+ HS +
Sbjct: 793 LWTWGPES----LDTQKKRKMKKKDKDYSHTGRTELVLLPGSVAGVSGGSCHSMCLLVTG 848
Query: 356 AIMTWGWGEHGQLGLGNTCDQ 376
+++WG E G+LG T Q
Sbjct: 849 EVLSWGSTESGRLGQNTTKSQ 869
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 147 LFTCGDGTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCL--GNQVY 203
L+ G+ T LG G D P +V F +V Q++CG H+ VL+K G +VY
Sbjct: 60 LYAWGENTNNVLGFGIDTDKVDLPTRVPFFSIYDVFQVSCGYLHTAVLIKSITESGGKVY 119
Query: 204 GFGSGKRGQLGVSKDRIR---------------SVSLPQVTIGLHDIEIVGISANGDRSA 248
G G RG+LG ++ S+S P + + +I I + +
Sbjct: 120 TMGLGNRGRLGYTRSDTEFGLEEEYLDKNESWYSIS-PCIVKFPSNTKISRICCGANHTL 178
Query: 249 ALSAEGHLYTWG------RGFNSTSDVNCPQSLP---SSLSFSQAALGWNHVLVLTGDGE 299
ALS GHLY+WG G ST DV P + +SL A G H L T +G
Sbjct: 179 ALSDNGHLYSWGVGQFGCLGTGSTEDVFFPTKIEISNNSLKVQHIAAGSRHSLCCTENGN 238
Query: 300 VLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+ G + +G L + + + V ++ V + G HS + + T
Sbjct: 239 LFAWGSNANGRLG----IGGVNGIKLKPTIVQSMLPYHVCFVVTGEAHSGCIDRMGIVFT 294
Query: 360 WGWGEHGQLGLGNTCDQIHPKVVN 383
WG G +GQLG G D P+ V+
Sbjct: 295 WGNGSNGQLGHGLQLDCPIPRKVH 318
Score = 81.6 bits (200), Expect = 7e-13, Method: Composition-based stats.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 52/328 (15%)
Query: 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM---VDALYPKPVTF--- 120
++V +ACG AH + LT GG V++WG S GQLG G + + K TF
Sbjct: 489 NTVRQIACGEAHNILLT-----YGGCVYTWGDNSYGQLGIGSLHRDLGETSNKNKTFVSE 543
Query: 121 -----FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF 175
F G I ++ G+ H+ SG FT G G +GQLG G + PV + S
Sbjct: 544 PNEVKFSG---PIRRVACGYWHTLCCDYSGNCFTWGRGDYGQLGTGAICNMYEPVGIISL 600
Query: 176 VNKNVHQI-------ACGMRHSLVLLKD---CLGNQVYGFGSGKRGQLGVSKD-RIRSVS 224
NV + AC + + + KD ++ +G+G G+LG+ D + ++
Sbjct: 601 --NNVIDVYGGESYSACIIATGITISKDLDTINSGDLWIWGNGDFGKLGLGDDVNGKCIA 658
Query: 225 LPQ-VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP- 276
P+ + +G IV +S + AL+A G+L TWG G+ +T++ N P +
Sbjct: 659 APRYLNLGY---PIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGTTNNHNRPIIIKF 715
Query: 277 --SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ S A+G +H + ++ DG+ L + G +L++ + + +P A K+ +
Sbjct: 716 PIGDVRISDIAVGTDHSMAVSVDGD-LWIWGKASVVLNETDVL---QPHIFA--KLESAT 769
Query: 335 GV-KVIQIAAGAEHSAVVTENRAIMTWG 361
GV KV + A A+ S +T + TWG
Sbjct: 770 GVPKVYSVYAHADISYAITNTGELWTWG 797
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 73/308 (23%), Positives = 127/308 (41%), Gaps = 48/308 (15%)
Query: 92 KVFSWGRGSSGQLGHGEMVDAL-YPKPVTFFDGHRYTITHISAGWNHSGFVSDS-----G 145
++++WG ++ LG G D + P V FF Y + +S G+ H+ + S G
Sbjct: 59 QLYAWGENTNNVLGFGIDTDKVDLPTRVPFFS--IYDVFQVSCGYLHTAVLIKSITESGG 116
Query: 146 CLFTCGDGTFGQLGHGDYRSHS------------------SPVKVSSFVNKNVHQIACGM 187
++T G G G+LG+ RS + SP V N + +I CG
Sbjct: 117 KVYTMGLGNRGRLGYT--RSDTEFGLEEEYLDKNESWYSISPCIVKFPSNTKISRICCGA 174
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP-QVTIGLHDIEIVGISANGDR 246
H+L L + +Y +G G+ G LG V P ++ I + +++ I+A
Sbjct: 175 NHTLALSDN---GHLYSWGVGQFGCLGTGS--TEDVFFPTKIEISNNSLKVQHIAAGSRH 229
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGD--------- 297
S + G+L+ WG N + + + Q+ L ++ V+TG+
Sbjct: 230 SLCCTENGNLFAWGSNANGRLGIGGVNGIKLKPTIVQSMLPYHVCFVVTGEAHSGCIDRM 289
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G V G +G L ++ P KV + + +Q+A GA S +T++ +
Sbjct: 290 GIVFTWGNGSNGQLGHGLQLDCPIP-----RKVHGISSIPFVQLAFGAFISMGLTQSGDV 344
Query: 358 MTWGWGEH 365
WG +H
Sbjct: 345 YIWGSKQH 352
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 58/274 (21%)
Query: 127 TITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG----HGDYRSHSSPVKVSSFVNKN--- 179
T+ I+ G H+ ++ GC++T GD ++GQLG H D S+ K +FV++
Sbjct: 490 TVRQIACGEAHNILLTYGGCVYTWGDNSYGQLGIGSLHRDLGETSN--KNKTFVSEPNEV 547
Query: 180 -----VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
+ ++ACG H+L D GN + +G G GQLG I ++ P I L++
Sbjct: 548 KFSGPIRRVACGYWHTLCC--DYSGN-CFTWGRGDYGQLGTGA--ICNMYEPVGIISLNN 602
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVL 294
+ + + SA + A G + D++ S
Sbjct: 603 V--IDVYGGESYSACIIATG--------ITISKDLDTINS-------------------- 632
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G++ + G G L + V+ +A + NL G +++++ G H+ +T N
Sbjct: 633 ---GDLWIWGNGDFGKLGLGDDVNGK---CIAAPRYLNL-GYPIVKVSLGTVHTLALTAN 685
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGD 386
++TWG G +G+LG+G T + P ++ +GD
Sbjct: 686 GNLITWGAGYYGRLGVGTTNNHNRPIIIKFPIGD 719
Score = 46.6 bits (109), Expect = 0.023, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 255 HLYTWGRGFNS-------TSDVNCPQSLP--SSLSFSQAALGWNHVLVLT-----GDGEV 300
LY WG N+ T V+ P +P S Q + G+ H VL G+V
Sbjct: 59 QLYAWGENTNNVLGFGIDTDKVDLPTRVPFFSIYDVFQVSCGYLHTAVLIKSITESGGKV 118
Query: 301 LMLGGSHHGML----SDPE---------RVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+G + G L SD E + S +S + K + K+ +I GA H
Sbjct: 119 YTMGLGNRGRLGYTRSDTEFGLEEEYLDKNESWYSISPCIVKFPS--NTKISRICCGANH 176
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386
+ +++N + +WG G+ G LG G+T D P + + +
Sbjct: 177 TLALSDNGHLYSWGVGQFGCLGTGSTEDVFFPTKIEISN 215
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 308 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 148
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ + +I+ G S V D+G ++ G
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVVNIACGQMCSMAVVDTGEVYVWGY 207
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +VS+ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 264
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA + GH+Y WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 312
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 22/286 (7%)
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146
+ + ++F G G LG G++ + P+ + G + +G H + G
Sbjct: 37 TTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSG-PHVVLATTEGE 95
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGF 205
+FT G + QLG+G P +S+ NK V ++ACG HSLVL D +V+ +
Sbjct: 96 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAW 152
Query: 206 GSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---- 261
G GQ+G + + +VT L + +V I+ S A+ G +Y WG
Sbjct: 153 GYNNSGQVGSGSTANQPIP-RRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNG 211
Query: 262 ----GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G + C S + + A G+ H LVLT +G+V G + +G L +
Sbjct: 212 QLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 271
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
+ + P V +EK ++I+IAA A SA T+ + WG
Sbjct: 272 NQSYPTPVVVEK------DRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,986,769,651
Number of Sequences: 23463169
Number of extensions: 309695476
Number of successful extensions: 856078
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3461
Number of HSP's successfully gapped in prelim test: 2078
Number of HSP's that attempted gapping in prelim test: 741843
Number of HSP's gapped (non-prelim): 35180
length of query: 416
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 271
effective length of database: 8,957,035,862
effective search space: 2427356718602
effective search space used: 2427356718602
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)