BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014875
(416 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 161/353 (45%), Gaps = 20/353 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V SWG G DGQLG G D SP L+ + + CG H +A + G +V+S
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS----GMEVYS 91
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
WG G G+LGHG D P P+ G R I I+ G +H V+ G + + G
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIR--IKQIACGDSHCLAVTMEGEVQSWGRNQN 149
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
GQLG GD P K+ +F + +A G H+ + +D +YG+G G+ G LG+
Sbjct: 150 GQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED---GDLYGWGWGRYGNLGL 206
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----GFNSTSDVNC 271
R V + G + +V S + S + Y W + G D
Sbjct: 207 GDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 272 PQSLPS-SLSF-SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEK 329
P L + S SF SQ + GW H + LT DG++ G + G + + P+ V
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325
Query: 330 VSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV 382
D KV+Q++ G H+ VTE + WG G +GQLG+G + D+ PK++
Sbjct: 326 ----DDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 34/353 (9%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTI 128
V +++ G +H +AL S G V SWGRG GQLGHG+ D P ++ DGH+ I
Sbjct: 17 VLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ--I 69
Query: 129 THISAGWNHSGFVSDSGC-LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
++ G +H+ S SG +++ G G FG+LGHG+ +P+ + + + QIACG
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGD 129
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGD 245
H L + + +V +G + GQLG+ ++D + +PQ I I ++A +
Sbjct: 130 SHCLAV---TMEGEVQSWGRNQNGQLGLGDTEDSL----VPQKIQAFEGIRIKMVAAGAE 182
Query: 246 RSAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSS--LSFSQAALGWNHVLVLTGD 297
+AA++ +G LY WG G +D P+ + S+ S A GW H + ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 242
Query: 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G S +G L + P K+ L + QI+ G H+ +T + +
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIP-----HKLEALSNSFISQISGGWRHTMALTSDGKL 297
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
WGW + GQ+G+GN DQ P V F + ++V CG T A++
Sbjct: 298 YGWGWNKFGQVGVGNNLDQCSPVQV----RFPDDQKVVQVSCGWRHTLAVTER 346
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 12/230 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V SWG +GQLG G D L PQ + + M+A G H A+T G ++
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED-----GDLY 194
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
WG G G LG G+ D L P+ VT G + ++ ++ GW H+ VS SG L+T G
Sbjct: 195 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSM--VACGWRHTISVSYSGALYTYGWSK 252
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+GQLGHGD H P K+ + N + QI+ G RH++ L D ++YG+G K GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD---GKLYGWGWNKFGQVG 309
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
V + + S QV D ++V +S + A++ +++ WGRG N
Sbjct: 310 VGNN-LDQCSPVQVRF-PDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 157/347 (45%), Gaps = 34/347 (9%)
Query: 31 QQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIG 90
Q ++V+SWG G G+LG G D +P + + +ACG +H LA+T +
Sbjct: 84 QSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT-----ME 138
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G+V SWGR +GQLG G+ D+L P+ + F+G R I ++AG H+ V++ G L+
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--IKMVAAGAEHTAAVTEDGDLYGW 196
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G +G LG GD P +V+S + + +ACG RH++ + +Y +G K
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV---SYSGALYTYGWSKY 253
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV- 269
GQLG + +P L + I IS + AL+++G LY W G+N V
Sbjct: 254 GQLG--HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGW--GWNKFGQVG 309
Query: 270 ---NCPQSLPSSLSFS------QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
N Q P + F Q + GW H L +T V G +G L E V
Sbjct: 310 VGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRN 369
Query: 321 RPLSVALEKV----------SNLDGVKVIQIAAGAEHSAVVTENRAI 357
P + V SN+D + AE AVV + +
Sbjct: 370 FPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAERYAVVPDETGL 416
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 73/243 (30%)
Query: 236 EIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPS------------ 277
+++ ISA S AL + + +WGRG + D P L +
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75
Query: 278 ---SLSFSQAAL-----GW-----------------------------------NHVLVL 294
++++SQ+ + GW +H L +
Sbjct: 76 ADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAV 135
Query: 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
T +GEV G + +G L + S P +K+ +G+++ +AAGAEH+A VTE+
Sbjct: 136 TMEGEVQSWGRNQNGQLGLGDTEDSLVP-----QKIQAFEGIRIKMVAAGAEHTAAVTED 190
Query: 355 RAIMTWGWGEHGQLGLGNTCDQIHP-KVVNLGDEFQN------RDTQLEVFCGSGFTYAI 407
+ WGWG +G LGLG+ D++ P +V + G E + R T + G+ +TY
Sbjct: 191 GDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 250
Query: 408 SRH 410
S++
Sbjct: 251 SKY 253
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 167/339 (49%), Gaps = 31/339 (9%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLS---SLSSVSMLACGGAHVLALTSPSSVIGGK 92
V + G G+ G+LG G +++ + + L S+ VS H LA T+ G+
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE-----GE 478
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVT-FFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
VFSWG G G+LGHG YPK + G + +SAG+ HS V++ G L+T G
Sbjct: 479 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK--VVVCVSAGYRHSAAVTEDGELYTWG 536
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+G FG+LGHGD S + P V NV +++CG H++ L KD G V+ FG G G
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKD--GRTVWSFGGGDNG 592
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG----RGFNSTS 267
+LG V P+V L + I + A S AL++ G +Y WG G S+
Sbjct: 593 KLG--HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 650
Query: 268 DVNCPQSLPSSLSFSQ---AALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
L L+ ++ ++G +H L L+ D EV G + G + +ST P++
Sbjct: 651 ATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG---QGNSTGPIT 707
Query: 325 VALEKVSNLDGVKVIQIAAGAEHS---AVVTENRAIMTW 360
+KVS LDG+ + QI+AG HS + +R ++ W
Sbjct: 708 KP-KKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 168/375 (44%), Gaps = 59/375 (15%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV-------------KVWSWGAGTDGQLGTGRLHDEL 56
E G++ ++ A P + QQV+ V + G G+ G+LG G D
Sbjct: 4012 EAGRNVMVPAAAPSFSQA---QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-- 4066
Query: 57 SPQLLNLSSLSSVSML----------ACGG-AHVLALTSPSSVIGGKVFSWGRGSSGQLG 105
L L+ +S L +CG H +ALT G+VFSWG G G+LG
Sbjct: 4067 ------LHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SGEVFSWGDGDYGKLG 4115
Query: 106 HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRS 165
HG P+ + G + +S G+ HS V+ G LFT G+G +G+LG G+ +
Sbjct: 4116 HGNSDRQRRPRQIEALQGEE--VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN 4173
Query: 166 HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
P +V++ + Q+ACG+ H+L + D G+ V+ FG G G+LG+ +S
Sbjct: 4174 KKLPERVTALEGYQIGQVACGLNHTLAVSAD--GSMVWAFGDGDYGKLGLGNSTAKSS-- 4229
Query: 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF------NSTSDVNCPQSLP--S 277
PQ L I I ++ S AL+ +GH+YT+G+ + N PQ +P +
Sbjct: 4230 PQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLA 4289
Query: 278 SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337
+ A+G H L L +G+V G + G L P V+ L G
Sbjct: 4290 GVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP-----TLVTGLQGKN 4344
Query: 338 VIQIAAGAEHSAVVT 352
V QI+AG HSA T
Sbjct: 4345 VRQISAGRCHSAAWT 4359
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 30/359 (8%)
Query: 36 VWSWGAGTDGQLG-TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V+ WGAG GQL GR + + P S S + CG + + G V
Sbjct: 3999 VYLWGAGRHGQLAEAGR--NVMVPA--AAPSFSQAQQVICGQNCTFVIQA-----NGTVL 4049
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDG 153
+ G GS G+LG G D ++ G T S G + HS +++SG +F+ GDG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+G+LGHG+ P ++ + + V Q++CG +HS V+ D +++ FG+G G+L
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD---GKLFTFGNGDYGRL 4166
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY------TWGR-GFNST 266
G+ + LP+ L +I ++ + + A+SA+G + +G+ G ++
Sbjct: 4167 GLGNTSNKK--LPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 267 SDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLS 324
+ + PQ + + + A G + LT DG V G L + + RP
Sbjct: 4225 TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP-- 4282
Query: 325 VALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+++ L GV + +A GAEH+ + N + WG GQLGLG+T P +V
Sbjct: 4283 ---QQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V+ WG SS QL G L PK F + I AG + +S G + CG
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQT----IEAGQYCTFVISTDGSVRACG 428
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM---RHSLVLLKDCLGNQVYGFGSG 208
G++G+LG GD + S+ K++ ++++ +++ H+L + +V+ +G G
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE---GEVFSWGDG 485
Query: 209 KRGQLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
G+LG + P++ G L +V +SA SAA++ +G LYTWG
Sbjct: 486 DYGKLGHGNSSTQKY--PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543
Query: 262 GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGE-VLMLGGSHHGML--SDPERVS 318
G ++ N P + + + + G +H + L+ DG V GG +G L D RV
Sbjct: 544 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNT-CDQI 377
+ + L G+ + ++ AG++ S +T + WG G LG G++ +
Sbjct: 604 KPK-------VIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATAL 654
Query: 378 HPKVVN 383
PK++
Sbjct: 655 RPKLIE 660
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 77/331 (23%)
Query: 89 IGGK--VFSWGRGSSGQL---GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143
+GGK V+ WG G GQL G MV A P +F + + G N + +
Sbjct: 3993 LGGKCDVYLWGAGRHGQLAEAGRNVMVPAAAP---SFSQAQQ-----VICGQNCTFVIQA 4044
Query: 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI--ACGMR-HSLVLLKDCLGN 200
+G + CG+G++G+LG G+ +S+ V Q+ +CG HS+ L +
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---SG 4101
Query: 201 QVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
+V+ +G G G+LG + DR R P+ L E+V
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRR---PRQIEALQGEEVV--------------------- 4137
Query: 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
Q + G+ H V+T DG++ G +G L +
Sbjct: 4138 -----------------------QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK 4174
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P E+V+ L+G ++ Q+A G H+ AV + + +G G++G+LGLGN+ +
Sbjct: 4175 KLP-----ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS 4229
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
P+ +++ + +V CG+ F+ A+++
Sbjct: 4230 PQKIDVLCGIGIK----KVACGTQFSVALTK 4256
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSA 349
H L T +GEV G +G L + P + L G V+ ++AG HSA
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ----GPLQGKVVVCVSAGYRHSA 524
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVV----NLGDEFQNRDTQLEVFCGSGFTY 405
VTE+ + TWG G+ G+LG G++ + P +V N+G EV CGS T
Sbjct: 525 AVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG----------EVSCGSSHTI 574
Query: 406 AISR 409
A+S+
Sbjct: 575 ALSK 578
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 160/377 (42%), Gaps = 71/377 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSSVIGGK 92
KV++ G GT+G+LG G H+ P L + V +A GG H LALT + GK
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT-----LDGK 3093
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VFSWG G G+LGHG P+ V + I ++ G +HS +S G L+T G
Sbjct: 3094 VFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK--IRDVACGSSHSAAISSQGELYTWGL 3151
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKR 210
G +G+LGHGD + P V++ + V Q+ACG R +L L +D V+ +G G
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTED---GAVFSWGDGDF 3208
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
G+LG + P L I +V I S AL+ G ++TWG+G
Sbjct: 3209 GKLG--RGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG-------- 3258
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
D L GG H P +
Sbjct: 3259 --------------------------DYYRLGHGGDQHVRKPQP---------------I 3277
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK-VVNLGDEFQ 389
L G +VI +A GA H VT+ + WG +HGQ G GNT P V+ L F
Sbjct: 3278 GGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFV 3337
Query: 390 NRDTQLEVFCGSGFTYA 406
NR V CGS + A
Sbjct: 3338 NR-----VACGSSHSIA 3349
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V++WG G DG+LG G P+L+ + SV+ +ACG AH A+T+ G V
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA-----SGHVL 4210
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGHG+ D L PK V G+R +G + ++D +++ GDG
Sbjct: 4211 TWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK---SGAVYTWGKGDFHRLG 4327
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ L +I+ I+ A S G +YTWG
Sbjct: 4328 HGSVDHVRR---PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 27/291 (9%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LALT+ G+V++WG G G+LGHG + PK V +G ++ I+ G
Sbjct: 4144 GGKHCLALTT-----EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNG--MSVADIACG 4196
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS ++ SG + T G G +G+LGHGD P V + + IACG +L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
+ D + V+ +G G G+LG + LP L + +V + S AL+
Sbjct: 4257 ITDD---DNVWSWGDGDYGKLG--RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK 4311
Query: 253 EGHLYTWGRG------FNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLG 304
G +YTWG+G S V P+ + + A G H + + GEV G
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWG 4371
Query: 305 GSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
+ G L D + RP VA L G ++++ G+ H+ ++ ++
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVA-----ALQGKHIVKVTCGSAHTLALSTSQ 4417
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+SWG G D +LG G H P + V + CG ++ A+T GG + +W
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT-----CGGNLLTW 692
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
GRG+ +LGHG D P V H + +G HS ++ G +F GDG +G
Sbjct: 693 GRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
+LG+G+ P+ V S V ++ G + S+ L + Q+Y +G +
Sbjct: 753 KLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSE---GQLYTWGKATCLGHQLV 807
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276
+ ++ S+P++ L IV ++ + ALS+ G ++ WGR N + + CP S+
Sbjct: 808 ERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGR--NDSQQI-CPASVS 864
Query: 277 S 277
S
Sbjct: 865 S 865
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 162/383 (42%), Gaps = 29/383 (7%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +P SL LA G + A+T GK+F+
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-----DGKLFA 4105
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G GS G+LG G P + +++G H ++ G ++ G+G
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 156 GQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL-- 213
G+LGHG+ S+ P V +V IACG HS + V +G G+ G+L
Sbjct: 4166 GKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA---SGHVLTWGKGRYGRLGH 4222
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTS 267
G S+D++R L + +G I+I S + ++ ++ + ++++WG G +
Sbjct: 4223 GDSEDQLRP-KLVEALLGYRAIDIACGSGDA-QTLCITDDDNVWSWGDGDYGKLGRGGSD 4280
Query: 268 DVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSV 325
P + S L + G + LT G V G L RP
Sbjct: 4281 GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRP--- 4337
Query: 326 ALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
+KV+ L G K+I IA G+ H +++ + TWG + GQLG G P++V
Sbjct: 4338 --KKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVA-- 4393
Query: 386 DEFQNRDTQLEVFCGSGFTYAIS 408
Q + ++V CGS T A+S
Sbjct: 4394 -ALQGKHI-VKVTCGSAHTLALS 4414
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL-SAEGHLYTW 259
V +G + QLG + +++ + Q L I I G G +S + S +G +Y
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAG----GSKSLFIVSQDGKVYAC 3043
Query: 260 GRGFNS------TSDVNCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHG 309
G G N T +V P LP + + G H L LT DG+V G G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R + +P V L K+ +A G+ HSA ++ + TWG GE+G+LG
Sbjct: 3104 KLGHGNRTTLDKP-----RLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGS 401
G+ Q+ PK+V R ++V CGS
Sbjct: 3159 HGDNTTQLKPKLVT---ALAGRRV-VQVACGS 3186
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 70/286 (24%)
Query: 125 RYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
R+ I ++ +S G L+T + + P+ + + IA
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLA----------KPEAEPLPMEEVAHDVFISIA 620
Query: 185 --CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA 242
C RH L + + + Y +G+G+ +LG R+V P L + +
Sbjct: 621 GHCEGRHFLAIDSN---HNAYSWGTGEDHRLGHGDTHARAV--PTKIAALEQHCVQSVYC 675
Query: 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
SAA++ G+L TWGRG + A LG
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-------------------TYARLG--------------- 701
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
HG D S L VAL +D + + +G HS +T + WG
Sbjct: 702 -----HGNSDD----RSLPTLVVALSDHMVVD----VALGSGDAHSLALTSEGLVFAWGD 748
Query: 363 GEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G++G+LG GN + P +V Q VF GS F+ A+S
Sbjct: 749 GDYGKLGNGNCNGSLQPILVESLPRVQR------VFAGSQFSVALS 788
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G G+LG G + L P L+ SL V + G +AL+S G++++
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVE--SLPRVQRVFAGSQFSVALSS-----EGQLYT 795
Query: 96 WGRGSSGQLGHGEMVDAL----YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
WG+ + LGH + ++ P+ V+ R I ++ H +S SG +F G
Sbjct: 796 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKR--IVDVAVSVAHCLALSSSGEVFGWG 851
Query: 152 DGTFGQLGHGDYRSHS---SPVKVSSFVNKNVHQIACGMRHSLV 192
Q+ S +P+ V S IAC SLV
Sbjct: 852 RNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTSAQSLV 894
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 142/303 (46%), Gaps = 28/303 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF R + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKR--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLVGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 264 --NSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
PQ L S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHP 379
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+P
Sbjct: 231 YVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 380 KVV 382
+ V
Sbjct: 286 RKV 288
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLGH-GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GTDCKKQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V +IA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ +FGQLG G D P K F+NK V + CG+RH++ +L D VY G
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML---SDPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L +D ++
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + L L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSPQLLKSLL-------GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQLL SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V +IACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ +ACG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I ++ G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
D + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V Q+A G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P + FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV ++ + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS---DPER 316
S + P+++ S + Q A G+ H L L+ EV G + +G L D ++
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQK 177
Query: 317 VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQ 376
+S + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-------QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 377 IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 231 YVP---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI--KSLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V Q+ACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T ++ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 158/333 (47%), Gaps = 32/333 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKP-VTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+ WG S GQ G + + +P V F R ++ ++ G NHS F+ + G ++TCG
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDR-SVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
T GQLGH R + P ++ + ++++ +ACG HSL L Q++ +G+G G
Sbjct: 60 LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDR---GQLFSWGAGSDG 114
Query: 212 QLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNC 271
QLG+ SV++P++ L+ I+ +S AL+A+G +TWG+ NS +
Sbjct: 115 QLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK--NSHGQLGL 171
Query: 272 PQSLPSSLS-----------FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+ PS S +Q A G H L+ G V G ++ G L +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
P V L + KV+ I+ G EH+AV+T++ + T+G G GQLG + D+++P+
Sbjct: 232 SPCHVKLLRTQ-----KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPR 286
Query: 381 VV--NLGDEFQN----RDTQLEVFCGSGFTYAI 407
V +G E R L SG YA
Sbjct: 287 RVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 32/358 (8%)
Query: 39 WGAGTDGQLG--TGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQ G T PQ+ S SV +ACGG H + L G+V++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLE-----DGEVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPV-TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTF 155
G + GQLGH + P+ + D H I H++ G +HS +SD G LF+ G G+
Sbjct: 59 GLNTKGQLGHER--EGNKPEQIGALADQH---IIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 156 GQLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG S + P + + + Q++CG H L L D Q + +G GQLG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD---GQFFTWGKNSHGQLG 170
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSD 268
+ K+ S + PQ L I + ++A G S ALS G ++ WG G + D
Sbjct: 171 LGKE-FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD 229
Query: 269 VNCP--QSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVA 326
P L + + G H VLT G V G G L P
Sbjct: 230 RESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP---- 285
Query: 327 LEKVSNLDGVKVIQIAAGAEHS-AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+V L G +V QIA G +H+ A V + I +G G GQLG G+TC+ P V
Sbjct: 286 -RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+ ++WG + GQLG G+ + SPQ + ++ +A GGAH AL+ + G V
Sbjct: 157 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS-----LSGAV 211
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
F WG ++GQLG + D P V + + +IS G H+ ++ SG +FT G G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVYISCGEEHTAVLTKSGGVFTFGAG 269
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
+ GQLGH +P +V + V QIACG +H+L + +Y FG G RGQL
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS--SGLIYAFGCGARGQL 327
Query: 214 G 214
G
Sbjct: 328 G 328
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 80/197 (40%), Gaps = 38/197 (19%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V+ WG GQLG D SP + L V ++CG H LT G VF+
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK-----SGGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS-GFVSDSGCLFTCGDGT 154
+G GS GQLGH M D + P+ V G +T I+ G H+ FV SG ++ G G
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSE--VTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G H+ VK S V G+ + GQL
Sbjct: 324 RGQLGTG----HTCNVKCPS--------------------------PVKGYWAAHSGQLS 353
Query: 215 VSKDRIRSVSLPQVTIG 231
DR + + Q+ G
Sbjct: 354 ARADRFKYHIVKQIFSG 370
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 39 WGAGTDGQLGTGRLHDE--LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
WG + GQLG G + +E L P+ + V + CG H + + G V++
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD-----DGTVYTC 58
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFG 156
G GQLGH + P+ V D I +S G H+ ++D G ++ G + G
Sbjct: 59 GCNDLGQLGHEKSRKK--PEQVVALDAQ--NIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 157 QLG-HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
QLG G P + S + + Q+ACG HSL L K ++V+ +G K GQLG+
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK---ASEVFCWGQNKYGQLGL 171
Query: 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDV 269
+ + S PQ+ L I + ++A G S L+ G ++ WGR G N +D
Sbjct: 172 GIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR 230
Query: 270 NCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
P L S S G +H LT +G V G +G L P
Sbjct: 231 YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP----- 285
Query: 328 EKVSNLDGVKVIQIAAGAEH-SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
KV L G V QIA G +H SA V + I ++G G +GQLG G+T ++ P V
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 30/304 (9%)
Query: 93 VFSWGRGSSGQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
+ WG S GQLG G + + L P+ FF + + + G H+ FV D G ++TC
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK--VRDVGCGLRHTVFVLDDGTVYTC 58
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G GQLGH +S P +V + +N+ ++CG H+L L QVY +G
Sbjct: 59 GCNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDK---GQVYAWGLDSD 113
Query: 211 GQLGV--SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------- 261
GQLG+ S++ IR +P+ L DI+IV ++ S ALS ++ WG+
Sbjct: 114 GQLGLQGSEECIR---VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Query: 262 -GFNSTSDVNCPQSLPSSL--SFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
G + PQ + S L F Q A G H VLT G + G + G L +
Sbjct: 171 LGIECQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND 229
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P + +L K++ I G +H+A +T+ + T+G G +GQLG +T +I+
Sbjct: 230 RYVP-----NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 379 PKVV 382
P+ V
Sbjct: 285 PRKV 288
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 28/272 (10%)
Query: 151 GDGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
G+ ++GQLG G D P K FVNK V + CG+RH++ +L D VY G
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDD---GTVYTCGCN 61
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN---- 264
GQLG K R + P+ + L IV +S + AL+ +G +Y WG +
Sbjct: 62 DLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 265 ---STSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS-DPERVS 318
S + P+++ S + Q A G+ H L L+ EV G + +G L E
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQK 177
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T P + + +L G+ +Q+AAG HS V+T + AI WG + GQLGL + D+
Sbjct: 178 QTSP-----QLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 379 PKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
P NL +++ + + CG T A+++
Sbjct: 233 P---NLLKSLRSQKI-VYICCGEDHTAALTKE 260
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 35 KVWSWGAGTDGQLGTG-RLHDELSPQLLNLSSLSSVSML--ACGGAHVLALTSPSSVIGG 91
+V+ WG GQLG G + SPQL+ SL + + A GGAH LT + G
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIK--SLLGIPFMQVAAGGAHSFVLT-----LSG 209
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+F WGR GQLG + D P + + I +I G +H+ ++ G +FT G
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVYICCGEDHTAALTKEGGVFTFG 267
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G +GQLGH +P KV + V QIACG +H+ + ++Y FG G G
Sbjct: 268 AGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPS--SGRIYSFGLGGNG 325
Query: 212 QLG 214
QLG
Sbjct: 326 QLG 328
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
++ WG GQLG +D P LL + + CG H ALT G VF+
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE-----GGVFT 265
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH-SGFVSDSGCLFTCGDGT 154
+G G GQLGH + P+ V F+ +T I+ G H S FV SG +++ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323
Query: 155 FGQLGHGDYRSHSSPVKVS 173
GQLG G + SP V
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV+S G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3013 KVYSCGEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3066
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3124
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3125 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3181
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3182 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3239
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3240 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3299
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3300 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 481 DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 535
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 652
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D++++ + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 712
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALP-----GLDSKHIVGI 767
Query: 342 AAGAEHS 348
A G S
Sbjct: 768 ACGPAQS 774
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4049 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4101
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4102 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC 4161
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4162 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4216
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4217 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4238
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4239 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4287
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4288 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4319
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4115
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4232
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4233 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 570
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 631 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKD---GQVYSWGKGDN 687
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 688 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4011
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4068
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4069 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 264 NSTSDVNCPQSLPSSLSFSQA-----ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4127 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4187 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4241
Query: 379 PKVVN 383
P+ V
Sbjct: 4242 PRQVQ 4246
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4011
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4072 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4127 HSDSEDQLKPKLV----EALQGHRVIDIACGSG 4155
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ + V Q+AC + L+L ++ G+
Sbjct: 429 WGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRN-----------GRVYTQA 477
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 478 YNSDML----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 533
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 534 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 592
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 593 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 648 TPKLI---EKLQDLDV-IKVRCGSQFSIALTK 675
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
+ G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3076 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3130
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3131 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3161
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 538
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 539 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 656
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD VI++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 657 DLD---VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4329
Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 37/219 (16%)
Query: 211 GQLGVSKDRIRSVSLPQ---VTIGLHDIEIVGISANGDR----------SAALSAEGHLY 257
G L ++ +R ++LPQ + I L +V + A+ DR S+ S +G L
Sbjct: 366 GPLSPNESFLRYLTLPQDNELAIDLRQTAVV-VMAHLDRLATPCMPPLCSSPTSHKGSLQ 424
Query: 258 T---WGR-GFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
WG G+ ++V P +SL Q A L+L+ +G V + ML
Sbjct: 425 EVIGWGLIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT-QAYNSDML 483
Query: 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTWGWGEHGQLG 369
A + V L +++IAA ++ H + + +WG G+ G+LG
Sbjct: 484 --------------APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
G+T PKV++ Q + + CGS ++ AI+
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 32/332 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS--VSMLAC--GGAHVLALTSPSSVIG 90
KV++ G T+G+LG G + P +++LSS V +A GG H ALT +
Sbjct: 3012 KVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-----VD 3065
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
GKVFSWG G G+LGH ++ P+ + R I I+ G +HS ++ SG L+T
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--IRDIACGSSHSAALTSSGELYTW 3123
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSG 208
G G +G+LGHGD + P V + V Q+ACG R +L L + L V+ +G G
Sbjct: 3124 GLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL---VFSWGDG 3180
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG----FN 264
G+LG + ++PQ L+ + I S AL+ G ++TWG+G
Sbjct: 3181 DFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 3238
Query: 265 STSDVNC--PQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
SDV+ PQ + A+G H L +T G+V G + HG + +
Sbjct: 3239 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNR 3298
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+P V L+G K+ ++A G+ HS T
Sbjct: 3299 KP-----TLVQGLEGQKITRVACGSSHSVAWT 3325
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 144/307 (46%), Gaps = 25/307 (8%)
Query: 54 DELSPQLLN-LSSLSSVSMLA-CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
D L+PQL+ L+S + V + A G H LAL + G+V+SWG G G+LGHG+ V
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAA-----TGEVYSWGCGDGGRLGHGDTVP 534
Query: 112 ALYPKPVTFFDGHR--YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSP 169
PK ++ F G + + HI+ G +S ++ G L+T G G +G+LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229
+ V+ V +ACG + L G QV+ +G G G+LG + P++
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENG-QVWSWGDGDYGKLG--RGGSDGCKTPKLI 651
Query: 230 IGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLP--SSLSF 281
L D+++V + S AL+ +G +Y+WG+G N + V P+ L
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKV 711
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
A G H L LT D EV G + D RV+ P ++ LD ++ I
Sbjct: 712 IDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALP-----GLDTKHIVGI 766
Query: 342 AAGAEHS 348
A G S
Sbjct: 767 ACGPAQS 773
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 69/337 (20%)
Query: 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG 134
GG H LAL+S G+V+SWG G+LGHG P+ + G + ++AG
Sbjct: 4047 GGKHCLALSSE-----GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRG--IEVVDVAAG 4099
Query: 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLV 192
HS V+ +G L+T G G +G+LGH D P V + V IACG +L
Sbjct: 4100 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 4159
Query: 193 LLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
L D + V+ +G G G+LG + +P L + +V + S AL+
Sbjct: 4160 LTDD---DTVWSWGDGDYGKLG--RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 4214
Query: 253 EGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLS 312
G +YTWG+G D L G H
Sbjct: 4215 SGAVYTWGKG----------------------------------DYHRLGHGSDDH---- 4236
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
RP +V L G KVI IA G+ H TE+ + TWG + GQLG G
Sbjct: 4237 ------VRRP-----RQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 4285
Query: 373 TCDQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
T P++V L + NR V CGS T A S
Sbjct: 4286 TNAIQRPRLVAALQGKKVNR-----VACGSAHTLAWS 4317
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG DG+LG G P+++ V +A GGAH +T+ G ++
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA-----AGDLY 4113
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG+G G+LGH + D L PK V GHR +G + ++D +++ GDG
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G+LG G P+K+ S V ++ CG + S+ L K VY +G G +LG
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK---SGAVYTWGKGDYHRLG 4230
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
S D +R P+ GL +++ I+ + +G +YTWG
Sbjct: 4231 HGSDDHVRR---PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSS----VSMLACGGAHVLALTSPSSVIG 90
+V+SWG G G+LG G P++++ S V +ACG + A+T+
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAE----- 569
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G++++WGRG+ G+LGHG D P V G + +G + V+++G +++
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
GDG +G+LG G +P + + +V ++ CG + S+ L KD QVY +G G
Sbjct: 630 GDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKD---GQVYSWGKGDN 686
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
+LG + V P++ GL +++ ++A AL+ + +++WG
Sbjct: 687 QRLGHGTE--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 42/272 (15%)
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
+G +G Y + P++ N V QIAC + L+L ++ G+
Sbjct: 428 WGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRN-----------GRVYTQA 476
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGD--RSAALSAEGHLYTWG------RGFNST 266
+ D + PQ+ GL IV I+A+ D AL+A G +Y+WG G T
Sbjct: 477 YNSDTL----APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT 532
Query: 267 SDVNCPQSLPSSLSFSQA-------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319
+ P+ + S+ S QA A G + +T +GE+ G ++G L
Sbjct: 533 VPLEEPKVI-SAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDE 591
Query: 320 TRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
P+ VA L G+KVI +A G+ + VTEN + +WG G++G+LG G +
Sbjct: 592 AIPMLVA-----GLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 646
Query: 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
PK++ ++ Q+ D ++V CGS F+ A+++
Sbjct: 647 TPKLI---EKLQDLDV-VKVRCGSQFSIALTK 674
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 24/305 (7%)
Query: 91 GKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTC 150
G ++ WG GQLG E P P R + G V+ G L+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRP--VQLIGGEQTLFAVTADGKLYAT 4009
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSG 208
G G G+LG G S S+P + S + + ++A G +H L L + +VY +G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE---GEVYSWGEA 4066
Query: 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF----- 263
+ G+LG P+V L IE+V ++A G SA ++A G LYTWG+G
Sbjct: 4067 EDGKLGHGNR--SPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 264 NSTSDVNCPQSLPSSLSFSQAA-----LGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
+S S+ L +L + G L LT D V G +G L
Sbjct: 4125 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
P+ K+ +L G+ V+++ G++ S +T++ A+ TWG G++ +LG G+
Sbjct: 4185 CKVPM-----KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4239
Query: 379 PKVVN 383
P+ V
Sbjct: 4240 PRQVQ 4244
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 202 VYGFGSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA-ALSAEGHLYTW 259
+YG+G RGQLG + +++ + + L ++++G G+++ A++A+G LY
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG----GEQTLFAVTADGKLYAT 4009
Query: 260 G------RGFNSTSDVNCPQSLPS--SLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHG 309
G G T V+ P L S + + A+ G H L L+ +GEV G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L R RP + +L G++V+ +AAG HSA VT + TWG G +G+LG
Sbjct: 4070 KLGHGNRSPCDRP-----RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
Query: 370 LGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSG 402
++ DQ+ PK+V E +++ CGSG
Sbjct: 4125 HSDSEDQLKPKLV----EALQGHRVVDIACGSG 4153
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+ +V+ +G + QLG K + +P + L + +V ++ A++ EG +Y
Sbjct: 2957 IRTKVFVWGLNDKDQLGGLKGS--KIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Query: 258 TWGRGFN-------STSDVNCPQSLP--SSLSFSQAAL--GWNHVLVLTGDGEVLMLGGS 306
G N S+ V P+ + SS + A+ G H LT DG+V G
Sbjct: 3015 ACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHG 366
G L R++ +P + L ++ IA G+ HSA +T + + TWG GE+G
Sbjct: 3075 DDGKLGHFSRMNCDKP-----RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYG 3129
Query: 367 QLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGS 401
+LG G+ Q+ PK+V LG ++V CGS
Sbjct: 3130 RLGHGDNTTQLKPKMVKVLLGHRV------IQVACGS 3160
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 168 SPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225
+P V ++N+ +IA H L L +VY +G G G+LG D + +
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLAL---AATGEVYSWGCGDGGRLG-HGDTV-PLEE 537
Query: 226 PQVTIGLHDIE----IVGISANGDRSAALSAEGHLYTWGRG------FNSTSDVNCPQSL 275
P+V + +V I+ SAA++AEG LYTWGRG S+ D P +
Sbjct: 538 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 597
Query: 276 P--SSLSFSQAALGWN--HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331
L A G L +T +G+V G +G L P +EK+
Sbjct: 598 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP--KLIEKLQ 655
Query: 332 NLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
+LD V+++ G++ S +T++ + +WG G++ +LG G +PK++
Sbjct: 656 DLD---VVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG +GQLG G + P+L+ V+ +ACG AH LA ++ GK+
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKL 4327
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
H+S G HS V+ + L+ G +GQLG G + S P V + + V ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
+LV + G VY G GQLG+ R+ + ++ + +I +SA + SAA
Sbjct: 99 TLVSTE---GGNVYATGGNNEGQLGLGDTEERN-TFHVISFFTSEHKIKQLSAGSNTSAA 154
Query: 250 LSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303
L+ +G L+ WG G + S+V PQ + S + G+ H +T DGE+ +
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVF 214
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
G +G L P ++ + ++ KVIQ+A G EH+ V+TEN A+ T+G G
Sbjct: 215 GEPENGKLGLPNQLLGNHRTPQLVSEIPE----KVIQVACGGEHTVVLTEN-AVYTFGLG 269
Query: 364 EHGQLGLGNTC-DQIHPKVV-NLGDEFQNRDTQLEVFCGSGFTYAIS 408
+ GQLGLG + PKV+ N+ D+ T + CG T I+
Sbjct: 270 QFGQLGLGTFLFETSEPKVIENIRDQ-----TISYISCGENHTALIT 311
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V + ACG H L T GG V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTE-----GGNVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF + I +SAG N S +++ G LF GD +
Sbjct: 110 ATGGNNEGQLGLGDTEERNTFHVISFFTSE-HKIKQLSAGSNTSAALTEDGRLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ + K V I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLKNVSNVCVPQQVT--IGKPVSWISCGYYHSAFVTTD---GELYVFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + PQ+ + + +++ ++ G+ + L+ E +YT+G G
Sbjct: 224 LPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T S+P+ + + R +++
Sbjct: 270 -----QFGQLGLGT--FLFET----------------SEPKVIENIRDQTISY------- 299
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
I+ G H+A++T+ + T+G G HG+LGLG
Sbjct: 300 ------ISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++ +G +G+LG L + +PQL++ V +ACGG H + LT
Sbjct: 210 ELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQVACGGEHTVVLTE------NA 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + TI++IS G NH+ ++D G ++T G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSEPKVIENI--RDQTISYISCGENHTALITDIGLMYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193
DG G+LG G ++ +H P S+F+ V +ACG H +V
Sbjct: 321 DGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ ++ G EHSAVVT N + +G GQLGLG
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLG 70
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 178/420 (42%), Gaps = 51/420 (12%)
Query: 21 KPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHV 79
+P+ E +++WGA + GQLG G D LS Q L + + + GG H
Sbjct: 2 EPEPHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHS 61
Query: 80 LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T G +F G GQLG G + LY P G I ++ GW+ +
Sbjct: 62 AVVTDE-----GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLG--CAIQQVACGWDFTI 114
Query: 140 FVSDSGCLFTCGDGTFGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
++++G + +CG +FGQLG HG R + + + V IA G+RH+L
Sbjct: 115 ILTENGQVLSCGSNSFGQLGVPHGPRRCVIP--QAIELLREKVVSIAAGLRHALAATAS- 171
Query: 198 LGNQVYGFG-----SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSA 252
V+ +G SG+R G + + P GL + + V + A D SA+L+
Sbjct: 172 --GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTD 229
Query: 253 EGHLYTWGRG-----FNSTSDVNCPQSLPSSLSFSQ--AAL--GWNHVLVLTGDGEVLML 303
G LY WG + + + PQ + + ++ AA+ GW H++ T G+V
Sbjct: 230 AGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTW 289
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--------------VKVIQIAAGAEHSA 349
G + +G L R TR + ++ +L G +I+ G+EH+
Sbjct: 290 GRADYGQLG---RTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNL 346
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V +WGW EHG G G D PK V F L V CG+G + A+ +
Sbjct: 347 AVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLG----LHVGCGAGHSLALCQ 401
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 338 VIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH--PKVVNLGDEFQNRDTQL 395
+ +I G HSAVVT+ ++ G + GQLGLG+T + ++ P LG Q
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQ------ 104
Query: 396 EVFCGSGFTYAISRH 410
+V CG FT ++ +
Sbjct: 105 QVACGWDFTIILTEN 119
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 137/288 (47%), Gaps = 31/288 (10%)
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG---DGTFG 156
S GQLG G D L P+ + F R ++ I+ G HS V+D G LF CG DG G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPR-SVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 157 QLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216
LGH + + +P K S + Q+ACG +++L ++ QV GS GQLGV
Sbjct: 83 -LGHTEDIPYFTPCK--SLFGCPIQQVACGWDFTIMLTEN---GQVLSCGSNSFGQLGVP 136
Query: 217 KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSL 275
R V +PQ I LH ++V I+A + A +A G ++ WG G S CP Q+L
Sbjct: 137 HGPRRCV-VPQA-IELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTL 194
Query: 276 P-----------SSLSFSQAAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTR 321
P + L S+A G +H LT GEV + G + HG L++ ++
Sbjct: 195 PLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANE---AAFL 251
Query: 322 PLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
P+ +E KV I +G H TE + TWG ++GQLG
Sbjct: 252 PVPQKIE-AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 166/397 (41%), Gaps = 49/397 (12%)
Query: 43 TDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101
+ GQLG G D L PQ LN SV + GG H +T GG +F G
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTD-----GGDLFVCGLNKD 78
Query: 102 GQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLG-- 159
GQLG G D Y P G I ++ GW+ + ++++G + +CG +FGQLG
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFG--CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVP 136
Query: 160 HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS-----GKRGQLG 214
HG R P + K V IA G+RH++ + V+ +G+ G+R G
Sbjct: 137 HGPRRC-VVPQAIELHKEKVVC-IAAGLRHAVAATASGI---VFQWGTGLASCGRRLCPG 191
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----FNSTSDV 269
+ + P GL + + + + A D SA+L+ G +Y WG N + +
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFL 251
Query: 270 NCPQSLPSSLSFSQAAL----GWNHVLVLTGDGEVLMLGGSHHGML-------------S 312
PQ + + ++ GW H++ T G++ G + +G L
Sbjct: 252 PVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEK 311
Query: 313 DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGN 372
+ +RP + L G +++ G+EH+ + +WGW EHG G G
Sbjct: 312 QDSFLPCSRPPNSMPSSPHCLTG--ATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDGT 368
Query: 373 TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
+ PK V + + L V CG+G + A+ +
Sbjct: 369 EANVWAPKPV----QALLSSSGLLVGCGAGHSLALCQ 401
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 22/100 (22%)
Query: 35 KVWSWGAGTDGQLGTG---------RLHDELSPQLLNLSSLSS-------VSMLACGGAH 78
K+++WG GQLG D P +S+ S + ++CG H
Sbjct: 285 KMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEH 344
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV 118
LA +IGG +SWG G G G + PKPV
Sbjct: 345 NLA------IIGGVCYSWGWNEHGMCGDGTEANVWAPKPV 378
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 176/415 (42%), Gaps = 54/415 (13%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLL-NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+++WGA + GQLG G D PQ L + + + GG H +T GG +F
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTD-----GGDLF 71
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
G GQLG G + L G I ++ GW+ + +++ G + +CG
Sbjct: 72 VCGLNKDGQLGLGHTEEVLRFTICKPLRG--CPIRQVACGWDFTIMLTEKGQVLSCGSNA 129
Query: 155 FGQLG--HGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG-----S 207
FGQLG HG R P + K V +A G+RH+L V+ +G S
Sbjct: 130 FGQLGVPHGP-RKCVVPQAIECLREKVVC-VAAGLRHALATTAT---GSVFQWGTGLASS 184
Query: 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR---GFN 264
G+R G + + P GL + V A D SA+L+ G LY WGR G
Sbjct: 185 GRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQL 244
Query: 265 STSDVNCPQSLPSSLS---FSQAAL-----GWNHVLVLTGDGEVLMLGGSHHGMLSDP-E 315
++ V P LP + F + GW H++ T G+V G + +G L E
Sbjct: 245 ASRAVFLP--LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLE 302
Query: 316 RVSSTRPL----SVALEKVSN--------LDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363
+ +P+ S+A + N L G +I+ G+EH+ V ++ +WGW
Sbjct: 303 PPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRDKCC-SWGWN 359
Query: 364 EHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR---HCLPSQ 415
EHG G G + P V +R L V CG+G + A+ + H +P Q
Sbjct: 360 EHGMCGDGTESNVWTPTPVQALPPSPSR--LLLVGCGAGHSLAVCQLPAHPVPCQ 412
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 24/121 (19%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-----------------LSSLSSVSMLACGGA 77
KV++WG GQLG RL + + + L L+ + ++CG
Sbjct: 285 KVFTWGRADYGQLGR-RLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSE 343
Query: 78 HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137
H LA VI K SWG G G G + P PV + + G H
Sbjct: 344 HNLA------VIRDKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGH 397
Query: 138 S 138
S
Sbjct: 398 S 398
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
++++WG GQLG GR +PQ++ + ++ ++ G AH +AL+ + G +
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALS-----MSGNI 212
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+SWG+ GQLG G P + D + + ++ G +HS ++ G LFT G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK--VEFVACGGSHSALLTQDGLLFTFGAG 270
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
GQLGH ++ P V+ V V QIACG H+L + D LG +V+ FGSGK GQL
Sbjct: 271 KHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD-LG-KVFSFGSGKDGQL 328
Query: 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273
G R + + LP ++++ ++ + + W + NS VN +
Sbjct: 329 GNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKENSY--VNLKR 386
Query: 274 SLPS 277
++P+
Sbjct: 387 TIPT 390
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEI 237
K + QI CG HSL L K G +++ +G GQLGV + + S + PQ+ L + +
Sbjct: 138 KKIIQITCGDYHSLALSK---GGELFAWGQNLHGQLGVGR-KFPSTTTPQIVEHLAGVPL 193
Query: 238 VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGW 288
ISA S ALS G++Y+WG+ G T + P SL L + A G
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDP-SLIEGLDNQKVEFVACGG 252
Query: 289 NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHS 348
+H +LT DG + G HG L + RP VA L G +V QIA G H+
Sbjct: 253 SHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA-----ELVGYRVTQIACGRWHT 307
Query: 349 -AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL 384
A V++ + ++G G+ GQLG G T DQ+ P V +
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV 344
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 53 HDELSPQLLNLSSL---SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-E 108
+D S + L S+ + + CG H LAL+ GG++F+WG+ GQLG G +
Sbjct: 121 YDNYSMKHLRFESILQEKKIIQITCGDYHSLALSK-----GGELFAWGQNLHGQLGVGRK 175
Query: 109 MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS 168
P+ V G + ISAG HS +S SG +++ G GQLG G S
Sbjct: 176 FPSTTTPQIVEHLAG--VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD 233
Query: 169 PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG--VSKDRIRSVSLP 226
P + N+ V +ACG HS +L +D L ++ FG+GK GQLG +++ +R +
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGL---LFTFGAGKHGQLGHNSTQNELRPCLVA 290
Query: 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSLPSSLS 280
++ +G +I A +S G ++++G G + T D P LP +S
Sbjct: 291 EL-VGYRVTQIA--CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP--LPVKVS 345
Query: 281 FSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
S+ +H T + E++M+ G + +L
Sbjct: 346 SSEELKLESH----TSEKELIMIAGGNQSIL 372
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 308 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 117/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G V+ P+ VT ++ +T I+ G V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT-IACGQMCCMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G+ + +P +V++ V ++ACG H+LVL + QVY +G+ GQ
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQVYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P VT+ I + + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTP-VTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G G
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY 163
LG G++ + P+ + +G + +G H + G +FT G + QLG+G
Sbjct: 78 LGLGDVQSTIEPRRLDSLNGKKIACLSYGSG-PHIVLATTEGEVFTWGHNAYSQLGNGTT 136
Query: 164 RSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G S +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVG-SGSTVNQ 192
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQS 274
+VT L + +V I+ A+ G +Y WG G + C +
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVA 252
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
+ + A G+ H LVLT +G+V G + +G L + + + P V +EK
Sbjct: 253 ALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK----- 307
Query: 335 GVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA SA T+ + WG
Sbjct: 308 -DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 129 THISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188
T +S G H+ V+ + L+ G +GQLG G + S P V + + V ACG
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSA 248
H+LV + G +VY G GQLG+ RS + ++ +I +SA + SA
Sbjct: 98 HTLVSTE---GGKVYAAGGNNEGQLGLGDTEERS-TFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 249 ALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLM 302
AL+ +G L+ WG G + ++V PQ + S + G+ H +T +G++
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 303 LGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
G G L P ++ + + V + G KV+Q+A G H+ V+TE +A+ T+G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMP---QPVPGIPG-KVVQVACGGGHTVVLTE-KAVYTFGL 268
Query: 363 GEHGQLGLG 371
G+ GQLGLG
Sbjct: 269 GQFGQLGLG 277
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 26/288 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G P + V ACG H L T GGKV+
Sbjct: 55 KLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTE-----GGKVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ + ++FF R I +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTEERSTFHLISFFTSQR-KIKQLSAGSNTSAALTEDGELFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G + + P +V+ V K + I+CG HS + + Q+Y FG + G+LG
Sbjct: 169 EGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTE---GQLYTFGEPECGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-----------F 263
+ + + +PQ G+ ++V ++ G + L+ E +YT+G G F
Sbjct: 224 LPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLF 281
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGML 311
++ +SF A G NH ++T G + G HG L
Sbjct: 282 ETSVPKAIEHIKDQKISF--IACGENHTALITDMGLMYTFGDGRHGKL 327
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 152/331 (45%), Gaps = 49/331 (14%)
Query: 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM--------VDALYPKPVTFF 121
+ L+CG H +T K++ +G + GQLG G V AL P+ V F
Sbjct: 38 TFLSCGDEHTAVVTG-----NNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF- 91
Query: 122 DGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNV 180
+ G NH+ ++ G ++ G GQLG GD S+ +S F + + +
Sbjct: 92 ---------AACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKI 142
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ-VTIGLHDIEIVG 239
Q++ G S L +D +++ +G GQ+G+ + + +V +PQ VT+G I
Sbjct: 143 KQLSAGSNTSAALTED---GELFMWGDNSEGQIGL--ENVTNVCVPQQVTVGKP---ISW 194
Query: 240 ISANGDRSAALSAEGHLYTWGR------GFNSTSDVN--CPQSLPSSL-SFSQAALGWNH 290
IS SA ++ EG LYT+G G + VN PQ +P Q A G H
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGH 254
Query: 291 VLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAV 350
+VLT + V G G L + T + A+E + + K+ IA G H+A+
Sbjct: 255 TVVLT-EKAVYTFGLGQFGQLGLGTFLFETS-VPKAIEHIKDQ---KISFIACGENHTAL 309
Query: 351 VTENRAIMTWGWGEHGQLGLG--NTCDQIHP 379
+T+ + T+G G HG+LGLG N+ +Q P
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYT 127
V +ACGG H + LT + V+++G G GQLG G + + PK + +
Sbjct: 245 VVQVACGGGHTVVLTEKA------VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQK-- 296
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS--PVKVSSFVNKNVHQIAC 185
I+ I+ G NH+ ++D G ++T GDG G+LG G S + P S+F+ V ++C
Sbjct: 297 ISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSC 356
Query: 186 GMRHSLVLLKDCLG 199
G H+LV LG
Sbjct: 357 GGCHTLVFATPRLG 370
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 20/158 (12%)
Query: 240 ISANGDRSAALSAEGHLY-----TWGR-GFNSTSDVNCPQSL----PSSLSFSQAALGWN 289
+S + +A ++ LY WG+ G S S V+ P + P + F AA G N
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKF--AACGRN 97
Query: 290 HVLVLTGDGEVLMLGGSHHGMLS--DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
H LV T G+V GG++ G L D E S+ +S + K+ Q++AG+
Sbjct: 98 HTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR------KIKQLSAGSNT 151
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLG 385
SA +TE+ + WG GQ+GL N + P+ V +G
Sbjct: 152 SAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVG 189
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 150/351 (42%), Gaps = 45/351 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ S ++ + ACG H LALT G VF
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT-----GSVF 222
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 223 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMLMDCKGNLYSFGCPE 280
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH +Y P +V+ F+ K V +ACG H+
Sbjct: 281 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 340
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I A S
Sbjct: 341 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYAGYTCS 394
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ A G + ++V + +
Sbjct: 395 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 454
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G L + + S A ++V LDG+ Q+A G HS V+ + +
Sbjct: 455 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 502
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ P+ + I + G N
Sbjct: 158 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE--AIVLAACGRN 210
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++D+G +F G+ GQLG G+ SP ++ + + + ++ACG S+++
Sbjct: 211 HTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLM-- 267
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ +D E+V R A+ E
Sbjct: 268 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 315
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 316 ---------KTKDG---QILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 363
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
E+ P L K+ + G QI AG S V+E + WG
Sbjct: 364 EQKDEMVP---RLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 42/277 (15%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + ++ + ACG H+L L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT 218
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 219 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 274 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 305
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
V R +++ +EK + + V V +A GA H+ V+ + + +WG+G +G+LG
Sbjct: 306 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 363
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D++ P++V L D F R +++ G ++A+S
Sbjct: 364 EQKDEMVPRLVKLFD-FPGRGA-TQIYAGYTCSFAVS 398
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 298 GEVLMLGGSHHGMLSD---PERVSSTRPLSVAL---EKVSNLDGVKVIQIAAG--AEHSA 349
G++L+ G ++ ++ P++ ++ R L L + L GV+V + +G A HS
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++T + +WG E GQLG G+T P+++ E + + + CG T A++
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI----EALSHEAIVLAACGRNHTLALT 216
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ ++ I+ G S V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMS-IACGQMCSMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +V++ V ++ACG H+LVL + Q+Y +G+ GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA S GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKSQGGHVYMWGQ 336
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 141/330 (42%), Gaps = 44/330 (13%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G SG
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
LG G++ + P+ + G + I +S G H + G +FT G + QLG+G
Sbjct: 78 LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135
Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
+ +VT L + ++ I+ S A+ G +Y WG G + C
Sbjct: 193 PIP-RRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + + A G+ H LVLT +G++ G + +G L + + + P V +EK
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307
Query: 334 DGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA A SA ++ + WG
Sbjct: 308 --DRIIEIAACHSAHTSAAKSQGGHVYMWG 335
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLL--NLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+V++WG QLG G + L P + NLS+ V +ACG H L LTS G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSN-KQVIEVACGSYHSLVLTS-----DGE 172
Query: 93 VFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
VF+WG +SGQ+G G + P+ VT ++ + +I+ G S V D+G ++ G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK-VVMNIACGQMCSMAVVDTGEVYVWGY 231
Query: 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQLG G + +P +V++ V ++ACG H+LVL + Q+Y +G+ GQ
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDE---GQIYAWGANSYGQ 288
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
LG +S P V IEI + SAA + GH+Y WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDRIIEIAACHS-AHTSAAKTQGGHVYMWGQ 336
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 44/330 (13%)
Query: 64 SSLSSVSMLACGGAHVLALTSPS--------------------SVIGGKVFSWGRGSSGQ 103
++LSS+ ML G + +L S + + ++F G SG
Sbjct: 18 ATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGC 77
Query: 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCGDGTFGQLGHGD 162
LG G++ + P+ + G + I +S G H + G +FT G + QLG+G
Sbjct: 78 LGVGDIQSTIEPRRLDSLTGKK--IASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135
Query: 163 YRSHSSPVKVSS-FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221
P +S+ NK V ++ACG HSLVL D +V+ +G GQ+G +
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD---GEVFAWGYNNSGQVGSGSTANQ 192
Query: 222 SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR--------GFNSTSDVNCPQ 273
+ +VT L + ++ I+ S A+ G +Y WG G + C
Sbjct: 193 PIP-RRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251
Query: 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
+ + + A G+ H LVLT +G++ G + +G L + + + P V +EK
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK---- 307
Query: 334 DGVKVIQIAA--GAEHSAVVTENRAIMTWG 361
++I+IAA A SA T+ + WG
Sbjct: 308 --DRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+F G G LG GD +S P ++ S K + ++ G +VL +V+ +G
Sbjct: 67 IFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATT--DGEVFTWG 124
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR----- 261
QLG V ++ L + +++ ++ S L+++G ++ WG
Sbjct: 125 HNAYSQLGNGTTNHGLVPC-HISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 262 -GFNSTSDVNCPQSLPSSLS---FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV 317
G ST++ P+ + L A G + + GEV + G + +G L
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG 243
Query: 318 SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
+ P +V+ L G++V ++A G H+ V+T+ I WG +GQLG GN +Q
Sbjct: 244 NQPTPC-----RVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQS 298
Query: 378 HPKVV 382
+P V
Sbjct: 299 YPTPV 303
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+S G + GQLG R P+ + + V +++CG H +A+ GKVF
Sbjct: 42 RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCH-----KGKVF 96
Query: 95 SWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+WG GS GQLG GE + + P + G + I +S G HS +S+ G +F+ G
Sbjct: 97 AWGAGSEGQLGIGEFKEISFMPTKIKALAGIK--IIQVSCGHYHSLALSEDGHVFSWGRN 154
Query: 154 TFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
+ GQLG G + RS + P KV S + Q+A G HS L L +G+GS + GQ
Sbjct: 155 SEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---SLTGTSFGWGSNRSGQ 211
Query: 213 LGVSKDRIRS-VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
L +S ++++ + P L ++ ++ IS + +A L+ EG ++T+G
Sbjct: 212 LALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFG 260
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 23/264 (8%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G +HS + + +++CGD ++GQLG +S P + + + +V ++CG HS+
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ C +V+ +G+G GQLG+ + + S +P L I+I+ +S S ALS
Sbjct: 88 AV---CHKGKVFAWGAGSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALS 143
Query: 252 AEGHLYTWGR--------GFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVL 301
+GH+++WGR G NS S PQ + S + +Q A G H L+ G
Sbjct: 144 EDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSF 202
Query: 302 MLGGSHHGMLS---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
G + G L+ + + +P S+ L + VI I+ G EH+AV+TE +
Sbjct: 203 GWGSNRSGQLALSGNKVKEQIYKPHSIG-----ALKNLSVIYISCGYEHTAVLTEEGQVF 257
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVV 382
T+G GQL Q P+++
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLI 281
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 54/203 (26%)
Query: 182 QIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS 241
Q A G HSL+L + ++VY G GQLG +D+ S P+ L+D+ + +S
Sbjct: 26 QAASGEHHSLLLFSN---HRVYSCGDNSWGQLGQRRDQ--STERPEPIQALNDLHVDLVS 80
Query: 242 ANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVL 301
G H + + G+V
Sbjct: 81 C--------------------------------------------GKEHSVAVCHKGKVF 96
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G G L + + +S K+ L G+K+IQ++ G HS ++E+ + +WG
Sbjct: 97 AWGAGSEGQLG----IGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWG 152
Query: 362 WGEHGQLGLG-NTCDQIHPKVVN 383
GQLGLG N+ Q P+ V
Sbjct: 153 RNSEGQLGLGKNSRSQAIPQKVK 175
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 152/349 (43%), Gaps = 63/349 (18%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K++ +G+ GQLG G + P + V + ACG H L T G V+
Sbjct: 55 KLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTD-----TGGVY 109
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+ G + GQLG G+ D + FF TI +SAG N S +++ G LF GD +
Sbjct: 110 AAGGNNEGQLGLGDTDDRDTFHQIVFFTPAD-TIKQLSAGANTSAALTEDGKLFMWGDNS 168
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQ+G D + P +V+ V K + I+CG HS + D ++Y FG + G+LG
Sbjct: 169 EGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSAFVTMD---GELYTFGEPENGKLG 223
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS 274
+ + + + PQ +G+ + ++ ++ G + L+ E +Y +G G
Sbjct: 224 LPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLT-EKVVYAFGLG------------ 269
Query: 275 LPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334
F Q LG L T + +++ ER+
Sbjct: 270 -----QFGQLGLGT--FLFETSEPKII-------------ERIKDQ-------------- 295
Query: 335 GVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHPKV 381
K+ I+ G H+A++TE + T+G G HG+LGLG N +Q P +
Sbjct: 296 --KICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTL 342
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 26/264 (9%)
Query: 131 ISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS 190
+S G H+ V+ + L+ G +GQLG G + P + + + V ACG H+
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
LV D G VY G GQLG+ R + Q+ I +SA + SAAL
Sbjct: 100 LVST-DTGG--VYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSAGANTSAAL 155
Query: 251 SAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLG 304
+ +G L+ WG G S+V P + S + G+ H +T DGE+ G
Sbjct: 156 TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFG 215
Query: 305 GSHHGMLSDPERV-----SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMT 359
+G L P + S R L + +VIQ+A G H+ V+TE + +
Sbjct: 216 EPENGKLGLPNELLMNHRSPQRVLGIP---------ERVIQVACGGGHTVVLTE-KVVYA 265
Query: 360 WGWGEHGQLGLGNTC-DQIHPKVV 382
+G G+ GQLGLG + PK++
Sbjct: 266 FGLGQFGQLGLGTFLFETSEPKII 289
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 35 KVWSWGAGTDGQLGTGR--LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGK 92
+++++G +G+LG L + SPQ + L V +ACGG H + LT
Sbjct: 210 ELYTFGEPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVVLTEKV------ 262
Query: 93 VFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
V+++G G GQLG G + + PK + + I HIS G NH+ +++ G L+T G
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQK--ICHISCGENHTALMTELGLLYTFG 320
Query: 152 DGTFGQLGHG--DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
DG G+LG G ++ + P S+F+ V IACG H LV LG
Sbjct: 321 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFATPRLG 370
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 65/247 (26%)
Query: 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLG 199
V D+G +FT G F + + P K F N ++CG H+ ++ +
Sbjct: 7 LVPDTGAVFTFGKTKFAE---------NIPSKFW-FKNDIPICLSCGDEHTAIVTGN--- 53
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259
N++Y FGS GQLG+ G ++A +
Sbjct: 54 NKLYMFGSNNWGQLGL----------------------------GSKAAIIKP------- 78
Query: 260 GRGFNSTSDVNCPQSL-PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVS 318
C ++L P + AA G NH LV T G V GG++ G L +
Sbjct: 79 ----------TCIKALKPEKVKL--AACGRNHTLVSTDTGGVYAAGGNNEGQLG----LG 122
Query: 319 STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIH 378
T + V + Q++AGA SA +TE+ + WG GQ+GL + +
Sbjct: 123 DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCI 182
Query: 379 PKVVNLG 385
P V +G
Sbjct: 183 PHEVTVG 189
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 45/322 (13%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ--LGHGEMVDALYPKPVTFFDGHRYTIT 129
+ACG H+L L+S G++ +WG GQ +GH + L+ DG I
Sbjct: 781 IACGAEHILVLSS-----SGQLSAWGGNRFGQCGVGHSFRIANLHQ-----VDGDWPAIE 830
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACG 186
I+ G HS F+ G L+T G G +GQLGHG R++S+ P +V+ + K V QIACG
Sbjct: 831 KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGG-RNNSNQLVPTRVNGLICK-VTQIACG 888
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H++VL +V GSG GQ+GV D + + + +G + + I+ +
Sbjct: 889 RAHTVVLTD---TGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG--PLRVRDIATHYYH 943
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
S ++ + ++ WGR P L + L + S
Sbjct: 944 SICITEDNRVFEWGRN-------------PQELKMRMFVMKKIRSAQLKNTEDPSSPSPS 990
Query: 307 HHGMLSDPERVSSTRPLSVALEKVS------NLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
+G S P RV+ P + E + LDG ++ +A G HSA++T + TW
Sbjct: 991 TNG--STP-RVNLNLPAEIPREDLGLREVKHFLDG-NIVSVACGLSHSALITSEGTLYTW 1046
Query: 361 GWGEHGQLGLGNTCDQIHPKVV 382
G G QLG GN +++ P V
Sbjct: 1047 GKGLDYQLGHGNKNERMEPHQV 1068
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 137/323 (42%), Gaps = 68/323 (21%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLS----SVSMLACGGAHVLALTSPSSVIGGKV 93
+WG GQ G G S ++ NL + ++ +ACG H + S G +
Sbjct: 799 AWGGNRFGQCGVGH-----SFRIANLHQVDGDWPAIEKIACGQFHSAFICS-----DGSL 848
Query: 94 FSWGRGSSGQLGHG--EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++G G GQLGHG + L P T +G +T I+ G H+ ++D+G + CG
Sbjct: 849 WTFGWGVWGQLGHGGRNNSNQLVP---TRVNGLICKVTQIACGRAHTVVLTDTGRVLVCG 905
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGK-- 209
G++GQ+G D V IA HS+ + +D N+V+ +G
Sbjct: 906 SGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITED---NRVFEWGRNPQE 962
Query: 210 -RGQLGVSKDRIRSVSL----------------------------PQVTIGLHDIE---- 236
+ ++ V K +IRS L P+ +GL +++
Sbjct: 963 LKMRMFVMK-KIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLD 1021
Query: 237 --IVGISANGDRSAALSAEGHLYTWGRGFN------STSDVNCPQSL--PSSLSFSQAAL 286
IV ++ SA +++EG LYTWG+G + + ++ P + P+ + +L
Sbjct: 1022 GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSL 1081
Query: 287 GWNHVLVLTGDGEVLMLGGSHHG 309
G NH + T DG V G + G
Sbjct: 1082 GNNHTIASTDDGSVFAWGKNDFG 1104
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHI 131
+ACG +H +TS G +++WG+G QLGHG + + P V +G ++ ++
Sbjct: 1027 VACGLSHSALITSE-----GTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWV--NV 1079
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLG 159
S G NH+ +D G +F G FGQ G
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 90/270 (33%), Gaps = 99/270 (36%)
Query: 36 VWSWGAGTDGQLGTGRLHD--ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVI---- 89
+W++G G GQLG G ++ +L P +N + V+ +ACG AH + LT V+
Sbjct: 848 LWTFGWGVWGQLGHGGRNNSNQLVPTRVN-GLICKVTQIACGRAHTVVLTDTGRVLVCGS 906
Query: 90 -------------------------------------------GGKVFSWGRG------- 99
+VF WGR
Sbjct: 907 GSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELKMR 966
Query: 100 -------SSGQLGHGEMVDALYPKPVT---------------------------FFDGHR 125
S QL + E D P P T F DG+
Sbjct: 967 MFVMKKIRSAQLKNTE--DPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDGN- 1023
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC 185
I ++ G +HS ++ G L+T G G QLGHG+ P +V ++
Sbjct: 1024 --IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSL 1081
Query: 186 GMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215
G H++ D V+ +G GQ GV
Sbjct: 1082 GNNHTIASTDD---GSVFAWGKNDFGQCGV 1108
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 273 QSLPSSLSF-----SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVAL 327
Q LP L + A G H+LVL+ G++ GG+ G S +
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGH--------SFRI 816
Query: 328 EKVSNLDG--VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG--NTCDQIHPKVVN 383
+ +DG + +IA G HSA + + ++ T+GWG GQLG G N +Q+ P VN
Sbjct: 817 ANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVN 876
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 148/351 (42%), Gaps = 45/351 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ S + ACG H LALT G VF
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET-----GSVF 224
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 225 AFGENKMGQLGLGNQTDAVPSPAQIMYNGQ--PITKMACGAEFSMIMDCKGNLYSFGCPE 282
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH +Y P +V+ F+ K V +ACG H+
Sbjct: 283 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 342
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I A S
Sbjct: 343 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGASQIYAGYTCS 396
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ A G + ++V + +
Sbjct: 397 FAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPS 456
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRA 356
G L + + S A ++V LDG+ Q+A G HS V+ + +
Sbjct: 457 PTFGELGYGDHKPKS---STAAQEVKTLDGIFSEQVAMGYSHSLVIARDES 504
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
AH L +T+ GK++SWGR GQLGHG+ P+ + I + G N
Sbjct: 160 AHSLLITTE-----GKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHE--VIVSAACGRN 212
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSH-SSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
H+ ++++G +F G+ GQLG G+ SP ++ + + + ++ACG S+++
Sbjct: 213 HTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIM-- 269
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ +D E+V R A+ E
Sbjct: 270 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIE---YDCELV------PRRVAIFIE-- 317
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 318 ---------KTKD---GQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 365
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
E+ P L K+ + G QI AG S V+E + WG
Sbjct: 366 EQKDEMVP---RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 42/277 (15%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + ++ + ACG H+L L +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTET 220
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V+ FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 221 ---GSVFAFGENKMGQLGLG-NQTDAVPSP-AQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 276 YSFG----------CPE-------YGQ--LGHNS------DGKFI---ARAQRIEYDCEL 307
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
V R +++ +EK + + V V +A GA H+ V+ + + +WG+G +G+LG
Sbjct: 308 VP--RRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 365
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D++ P++V L D F R +++ G ++A+S
Sbjct: 366 EQKDEMVPRLVKLFD-FPGRGAS-QIYAGYTCSFAVS 400
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 298 GEVLMLGGSHHGMLSD---PERVSSTRPLSVAL---EKVSNLDGVKVIQIAAG--AEHSA 349
G++L+ G ++ ++ P++ ++ R L L + L GV+V + +G A HS
Sbjct: 104 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 163
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++T + +WG E GQLG G+T P+++ E + + + CG T A++
Sbjct: 164 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLI----EGLSHEVIVSAACGRNHTLALT 218
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
++G HS + + + +CGD + GQLG + P + + V ++CG HSL
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ C +V+ +G+G GQLG+ + + S + P+ + L+DI+I+ +S S ALS
Sbjct: 89 AV---CHKGRVFAWGAGSEGQLGIGEFKEISFT-PKKIMTLNDIKIIQVSCGHYHSLALS 144
Query: 252 AEGHLYTWGRGFNSTSDVNCPQSLPSSLS-----------FSQAALGWNHVLVLTGDGEV 300
+ +++WG+ NS + + PS S +Q A G H L+ G
Sbjct: 145 KDSQVFSWGK--NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS 202
Query: 301 LMLGGSHHGMLSDPER---VSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357
G + G L+ R V S +PLSV L + V+ I+ G H+AV+T++ +
Sbjct: 203 FGWGSNSAGQLALSGRNVPVQSNKPLSVG-----ALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 358 MTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYA 406
T+G GQLG T ++ P++V D + ++ CGS T A
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-----QIDCGSYHTLA 301
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 26/332 (7%)
Query: 35 KVWSWGAGTDGQLGT-GRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V S G + GQLG G EL + L +L V +++CG H LA+ G+V
Sbjct: 43 RVLSCGDNSRGQLGRRGAQRGELPEPIQALETLI-VDLVSCGKEHSLAVCH-----KGRV 96
Query: 94 FSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD 152
F+WG GS GQLG GE + + PK + + + I +S G HS +S +F+ G
Sbjct: 97 FAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK--IIQVSCGHYHSLALSKDSQVFSWGK 154
Query: 153 GTFGQLGHG-DYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
+ GQLG G ++ S +SP +V S + Q+A G HS L L +G+GS G
Sbjct: 155 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---SLCGTSFGWGSNSAG 211
Query: 212 QLGVSKDRIRSVSLPQVTIG-LHDIEIVGISANGDRSAALSAEGHLYTWGR------GFN 264
QL +S + S +++G L ++ +V IS +A L+ +G ++T+G G++
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 265 STSDVNCPQSLPSSLSF-SQAALGWNHVLVLT-GDGEVLML--GGSHHGMLSDPERVSST 320
T + PQ + SQ G H L G+V+ G S + PE ++
Sbjct: 272 PTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTEN 331
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
+S + +D V+V I AG + V T
Sbjct: 332 FDISCLISAEDFVD-VQVKHIFAGTYANFVTT 362
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 283 QAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
QAA G H L+L + VL G + G L P E + L+ + V ++
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELP-----EPIQALETLIVDLVS 81
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD-QIHP-KVVNLGDEFQNRDTQLEVFCG 400
G EHS V + WG G GQLG+G + P K++ L D ++V CG
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLND-----IKIIQVSCG 136
Query: 401 SGFTYAISR 409
+ A+S+
Sbjct: 137 HYHSLALSK 145
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 149/349 (42%), Gaps = 45/349 (12%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G + P+L+ ACG H LALT G V+
Sbjct: 161 KLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTE-----NGSVY 215
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G IT ++ G S + G L++ G
Sbjct: 216 AFGENKMGQLGLGNKTDAVPSPAQILYNGQ--PITKVACGAEFSMIMDCKGNLYSFGCPE 273
Query: 155 FGQLGH---GDYRSHSSPV---------KVSSFVNKN------------VHQIACGMRHS 190
+GQLGH G Y + + + +++ F+ K V IACG+ HS
Sbjct: 274 YGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHS 333
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
L+L +V+ +G G G+LG S+ R V P++ + L D G I A S
Sbjct: 334 LILDSQ---KRVFSWGFGGYGRLGHSEQRDEMV--PRL-VKLFDFPGRGAAQIYAGATCS 387
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGG 305
A+S G L+ WG S P+++ + +L G + ++V + +
Sbjct: 388 FAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPS 447
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
G L + + + S ++V LDG+ Q+ G H+ VV +
Sbjct: 448 PTFGELGYGDNKAKS---STTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 40/298 (13%)
Query: 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHR 125
+ SV+ +C AH L +T + GK++SWGR GQLGHG++ PK + G
Sbjct: 141 VRSVASGSCA-AHSLLIT-----VEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEV 194
Query: 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIA 184
+ H + G NH+ ++++G ++ G+ GQLG G+ ++ + P N + + ++A
Sbjct: 195 F--VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVA 251
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG S+++ DC GN +Y FG + GQLG + D ++ +D E++
Sbjct: 252 CGAEFSMIM--DCKGN-LYSFGCPEYGQLGHNSDGKYIARAQRIE---YDCELIA----- 300
Query: 245 DRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLML 303
R A+ E T D Q LP ++ A G NH L+L V
Sbjct: 301 -RRIAIFIE-----------KTKD---GQILPVPNVVVRDIACGINHSLILDSQKRVFSW 345
Query: 304 GGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G +G L E+ P L K+ + G QI AGA S V+E + WG
Sbjct: 346 GFGGYGRLGHSEQRDEMVP---RLVKLFDFPGRGAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 42/277 (15%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + P + S + ACG H+L L ++
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTEN 211
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
VY FG K GQLG+ ++ +V P I + I ++ + S + +G+L
Sbjct: 212 ---GSVYAFGENKMGQLGLG-NKTDAVPSP-AQILYNGQPITKVACGAEFSMIMDCKGNL 266
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ + Q LG N DG+ + + D E
Sbjct: 267 YSFG----------CPE-------YGQ--LGHNS------DGKYIARA---QRIEYDCEL 298
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
++ R +++ +EK + + V V IA G HS ++ + + +WG+G +G+LG
Sbjct: 299 IA--RRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHS 356
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D++ P++V L D F R +++ G+ ++A+S
Sbjct: 357 EQRDEMVPRLVKLFD-FPGRGA-AQIYAGATCSFAVS 391
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 142/348 (40%), Gaps = 49/348 (14%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K+WSWG GQLG G +P+L+ + ACG H LALT G V+
Sbjct: 143 KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE-----NGTVY 197
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
++G GQLG G DA+ ++G I ++ G S V G L++ G
Sbjct: 198 TFGENKLGQLGQGNQTDAVLSPATIQYNGQ--PIVKVACGAEFSMIVDCKGNLYSFGCPE 255
Query: 155 FGQLGHG------------DYRSHSSPVKVSSFVNKN------------VHQIACGMRHS 190
+GQLGH ++ P +V+ F+ K +ACG H+
Sbjct: 256 YGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHT 315
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVG---ISANGDRS 247
LVL +V+ +G G G+LG ++ + V P++ + L D G I S
Sbjct: 316 LVLDSQ---KRVFSWGFGGYGRLGHAEQKDEMV--PRL-VKLFDFPGRGATQIYCGYQCS 369
Query: 248 AALSAEGHLYTWGRGFNSTSDVNCPQSLPS--SLSFSQAALGWNHVLVLTGDGEVLMLGG 305
ALS G L+ WG S P+++ A G + ++V D +
Sbjct: 370 FALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGPS 429
Query: 306 SHHGML--SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVV 351
G L D + SST ++V LDGV Q+ G HS V+
Sbjct: 430 PTFGELGYGDNKPKSST-----TAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 42/277 (15%)
Query: 137 HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKD 196
HS ++ G L++ G GQLGHGD + +P + + + ACG H+L L ++
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
VY FG K GQLG ++ +V P TI + IV ++ + S + +G+L
Sbjct: 194 ---GTVYTFGENKLGQLG-QGNQTDAVLSP-ATIQYNGQPIVKVACGAEFSMIVDCKGNL 248
Query: 257 YTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPER 316
Y++G CP+ LG N DG+ + + D E
Sbjct: 249 YSFG----------CPEY---------GQLGHN------SDGKFI---ARAQRIEFDCEL 280
Query: 317 VSSTRPLSVALEKVSN-----LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLG 371
+ R +++ +EK + + V +A GA H+ V+ + + +WG+G +G+LG
Sbjct: 281 IP--RRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 338
Query: 372 NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
D++ P++V L D F R +++CG ++A+S
Sbjct: 339 EQKDEMVPRLVKLFD-FPGRGA-TQIYCGYQCSFALS 373
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 121/287 (42%), Gaps = 37/287 (12%)
Query: 76 GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW 135
AH L +T+ GK++SWGR GQLGHG+ PK + I + G
Sbjct: 132 AAHSLIITTE-----GKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE--VIVAAACGR 184
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLK 195
NH+ ++++G ++T G+ GQLG G+ + + + ++ACG S+++
Sbjct: 185 NHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIV-- 242
Query: 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
DC GN +Y FG + GQLG + D ++ D E++ R A+ E
Sbjct: 243 DCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIEF---DCELI------PRRVAIFIE-- 290
Query: 256 LYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314
T D Q LP ++ A G NH LVL V G +G L
Sbjct: 291 ---------KTKD---GQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHA 338
Query: 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
E+ P L K+ + G QI G + S ++E + WG
Sbjct: 339 EQKDEMVP---RLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWG 382
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 298 GEVLMLGGSHHGMLSD---PERVSSTRPLSVAL---EKVSNLDGVKVIQIAAG--AEHSA 349
G++L+ G ++ ++ P++ ++ R L L + L V+V + +G A HS
Sbjct: 77 GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSL 136
Query: 350 VVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN-LGDEFQNRDTQLEVFCGSGFTYAIS 408
++T + +WG + GQLG G+T PK++ LG+E + CG T A++
Sbjct: 137 IITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE-----VIVAAACGRNHTLALT 191
Query: 409 RH 410
+
Sbjct: 192 EN 193
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ++P Q+ + V +ACG H +AL + G++F
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAA-----DGELF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + +I+ G S V DSG ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCL-HTKRVVNIACGQTSSMAVLDSGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 V-SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR 261
SK+ + S + Q+ + + + + SAA + GH+Y WG+
Sbjct: 267 TGSKNNLLSPT--QIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG-GAHVLALTSPSSVIGGKV 93
+V+ +G LGTG L P+ L + L+ G G HVL T G V
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTE-----DGVV 96
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
++WG QLG+G + P V + + ++ G +HS ++ G LF G
Sbjct: 97 YAWGHNGYSQLGNGTTNQGIAPVQVC-TNLLIKQVIEVACGSHHSMALAADGELFAWGYN 155
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVN-KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212
GQ+G G + +P KV++ ++ K V IACG S+ +L +VYG+G GQ
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDS---GEVYGWGYNGNGQ 212
Query: 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG 260
LG+ + + P LH + + I + AL+ EG LY WG
Sbjct: 213 LGLGNNGNQLT--PVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 55/297 (18%)
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+VF +G S LG G+ L PK + G + +G H ++ G ++ G
Sbjct: 42 EVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSG-PHVLLTTEDGVVYAWG 100
Query: 152 DGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
+ QLG+G +PV+V ++ + K V ++ACG HS+ L D +++ +G
Sbjct: 101 HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD---GELFAWGYNNC 157
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN 270
GQ+G S + +VT LH +V I+ S A+ G +Y WG
Sbjct: 158 GQVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWG---------- 206
Query: 271 CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330
G+G+ LG ++G P RV++
Sbjct: 207 -----------------------YNGNGQ---LGLGNNGNQLTPVRVAA----------- 229
Query: 331 SNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDE 387
L G+ V QI G H+ +T+ + WG +GQLG G+ + + P + + E
Sbjct: 230 --LHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKE 284
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 24/221 (10%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ L +I +S L+ E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYA 98
Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHG 309
WG G +T+ P + ++L Q A G +H + L DGE+ G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSN-LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N L +V+ IA G S V ++ + WG+ +GQL
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHGMCVN-----QIVCGYAHTLALT 249
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+ WG +GQLG G ++L+P + V+ + CG AH LALT G ++
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDE-----GLLY 255
Query: 95 SWGRGSSGQLGHGEMVDALYPKPV 118
+WG + GQLG G + L P +
Sbjct: 256 AWGANTYGQLGTGSKNNLLSPTQI 279
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 133/315 (42%), Gaps = 44/315 (13%)
Query: 29 EEQQVVKVWSWGAGTDGQLGTGR------------LHDELSPQLLNLSSLSSVSMLACGG 76
+ + V KVW G D QLG R L P L+ + V ++CG
Sbjct: 121 KTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGR 180
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHI 131
AH L LT V FS G S GQ G + D +Y + + FDG + +
Sbjct: 181 AHSLVLTDREGV-----FSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQ---VVQV 232
Query: 132 SAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHS 190
G +HS F++D G +++CG G GQ G G Y S+P K+ V Q+A
Sbjct: 233 VCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCC 292
Query: 191 LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAAL 250
L L D V+G+G+ + QL D + V++P+ ++ ++ G A L
Sbjct: 293 LALSAD---GGVFGWGNSEYLQLASVTDSTQ-VNVPRCLPFSGVGKVKQVACGGTGCAVL 348
Query: 251 SAEGHLYTWGRGF----NSTSDVNCPQSLPSSL----------SFSQAALGWNHVLVLTG 296
+AEGH++ WG G + P+ +P +L SQ G +H LT
Sbjct: 349 NAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTN 408
Query: 297 DGEVLMLGGSHHGML 311
GE+ + G + G L
Sbjct: 409 KGELFVWGKNIRGCL 423
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 159/415 (38%), Gaps = 57/415 (13%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTG---------------RLHDELSPQLLNLSSLSSVSML 72
E + +V+ WG G LG R + P L +S
Sbjct: 50 ERAARADRVFVWGFSFSGALGVPSFVVPSSGPGPRAGLRPRRRIQPVPYRLELDHKISSA 109
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGH----------GEMVDALYPKPVTFFD 122
ACG L + V KV+ G QLG E V P P+
Sbjct: 110 ACGYGFTLLSSKTKDVT--KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDR 167
Query: 123 GHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSHSSPVKVSSFVNK 178
+ +S G HS ++D +F+ G+ + GQ G + S S V +
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDG 227
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
V Q+ CG HSL L +VY G G GQ G+ I S ++ L + +V
Sbjct: 228 QVVQVVCGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITSTP-SKLGGDLAGVTVV 283
Query: 239 GISANGDRSAALSAEGHLYTWGRG-------FNSTSDVNCPQSLPSSL--SFSQAALGWN 289
++ GD ALSA+G ++ WG ++ VN P+ LP S Q A G
Sbjct: 284 QVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRP--LSVALEKVSNLDG-VKVIQIAAGA 345
VL +G V + G +G+L P+ + + P + L ++ + V+V QI G
Sbjct: 344 GCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGL 400
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
H A +T + WG G LG+G DQ P V + E ++V CG
Sbjct: 401 SHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE------PVDVACG 449
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats.
Identities = 83/300 (27%), Positives = 123/300 (41%), Gaps = 61/300 (20%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIA 184
I IS G HS F++D G L+T GDG G+LGHG+ S+SSP V F K V IA
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQV--------------- 228
G +HSL L + +VY +G QLG+ SLPQ+
Sbjct: 250 NGGKHSLAL---TICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 229 -------------------------TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
+ + I+IV +S +RSA ++ +G L+T+GRG
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 264 NSTSDVN----CPQSLPSSLSFSQAAL------GWNHVLVLTGDGEVLMLGGSHHGMLS- 312
+ + QS P + Q G H LVLT G V G + G L
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGI 426
Query: 313 ---DPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
++ + + + +I+++AG HS +++N WG ++G LG
Sbjct: 427 GCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 79.0 bits (193), Expect = 6e-14, Method: Composition-based stats.
Identities = 80/375 (21%), Positives = 154/375 (41%), Gaps = 72/375 (19%)
Query: 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGH-RYT 127
+ +++ G H +T G ++++G G G+LGHG + PK V FF
Sbjct: 190 IVLISTGAIHSSFITDQ-----GNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLR 244
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVH------ 181
+ I+ G HS ++ G +++ G QLG G+ S SS + +N N+
Sbjct: 245 VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN-GSSSSYYSLPQLINFNISYNNNNN 303
Query: 182 --------------------------------------QIACGMRHSLVLLKDCLGNQVY 203
+++CG S V+ L ++
Sbjct: 304 NNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGL---LF 360
Query: 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGF 263
FG G G+LG+ + + S P++ L I+ +S+ G S L+ +G ++++GR
Sbjct: 361 TFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRND 420
Query: 264 NSTSDVNC---PQSLPSSL--------------SFSQAALGWNHVLVLTGDGEVLMLGGS 306
+ C Q++P + + + + G H + ++ + + G S
Sbjct: 421 QGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRS 480
Query: 307 HHGMLSDPERVSSTRPLSVALEKVSNL-DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+G+L V R L V + S + D VK I +++G +H+ ++ + ++ +WG
Sbjct: 481 DYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAG 540
Query: 366 GQLGLGNTCDQIHPK 380
+LG + +Q+ PK
Sbjct: 541 QRLGFKSDENQLTPK 555
Score = 36.6 bits (83), Expect = 0.38, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE 396
K++ I+ GA HS+ +T+ + T+G G G+LG GN PK+V FQ + +
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEF---FQTKPSLRV 245
Query: 397 VFCGSGFTYAIS 408
V +G ++++
Sbjct: 246 VSIANGGKHSLA 257
Score = 33.5 bits (75), Expect = 3.4, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 36 VWSWGAGTDGQLGTGRLHDELS-PQLLNLSSLS--------SVSMLACGGAHVLALTSPS 86
V+S+G GQLG G ++ + P+ + S ++ ++ GG H +A++
Sbjct: 413 VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD-- 470
Query: 87 SVIGGKVFSWGRGSSGQLGHGEMVDALYPKPV------TFFDGHRYTITHISAGWNHSGF 140
++WGR G LG V PV D ++ +S+G+ H+
Sbjct: 471 ---NNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFI--DVSSGFQHNVA 525
Query: 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVN 177
+S G L++ G +LG + +P K F+N
Sbjct: 526 MSIDGSLYSWGCNAGQRLGFKSDENQLTPKKC--FIN 560
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 167/415 (40%), Gaps = 57/415 (13%)
Query: 28 EEEQQVVKVWSWGAGTDGQLGTGRL---------------HDELSPQLLNLSSLSSVSML 72
E + +V+ WG G LG + P L +S
Sbjct: 53 ERAARADRVFVWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQKISSA 112
Query: 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLG-HGEMVD-------ALYPKPVTF-FDG 123
ACG L + + V KV+ G QLG H D L P PV+ D
Sbjct: 113 ACGYGFTLLSSKTADVT--KVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDR 170
Query: 124 HRYT-ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGH----GDYRSHSSPVKVSSFVNK 178
+ T + +S G HS ++D +F+ G+ ++GQ G + S S V +
Sbjct: 171 PQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDG 230
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
V Q+ACG HSL L +VY G G GQ G+ I S S ++ L + ++
Sbjct: 231 QVVQVACGQDHSLFLTDK---GEVYSCGWGADGQTGLGHYNITS-SPTKLGGDLAGVNVI 286
Query: 239 GISANGDRSAALSAEGHLYTWGRG-------FNSTSDVNCPQSLPSSL--SFSQAALGWN 289
++ GD A+SA+G L+ WG ++ VN P+ L S QAA G
Sbjct: 287 QVATYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGT 346
Query: 290 HVLVLTGDGEVLMLGGSHHGMLSD-PERVSSTRP--LSVALEKVSNLDG-VKVIQIAAGA 345
VL G+G V + G +G+L P V S P + L ++ + ++V +I G
Sbjct: 347 GCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGL 403
Query: 346 EHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
H A +T + WG G LG+G DQ P V + E ++V CG
Sbjct: 404 SHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGE------PVDVACG 452
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 51/354 (14%)
Query: 33 VVKVWSWGAGTDGQLGTGRLHD----------ELSPQLLNLSSLSSVSML--ACGGAHVL 80
V KVW G D QLG R E SP L L +L +CG AH L
Sbjct: 128 VTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSL 187
Query: 81 ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP-----VTFFDGHRYTITHISAGW 135
LT V FS G S GQ G + + +Y + + FDG + ++ G
Sbjct: 188 VLTDREGV-----FSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQ---VVQVACGQ 239
Query: 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SSFVNKNVHQIACGMRHSLVLL 194
+HS F++D G +++CG G GQ G G Y SSP K+ NV Q+A L +
Sbjct: 240 DHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVS 299
Query: 195 KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEG 254
D ++G+G+ + QL D + V++P+ ++ + G A L+ EG
Sbjct: 300 AD---GGLFGWGNSEYLQLASVTDSTQ-VNVPRCLHFSGVGKVRQAACGGTGCAVLNGEG 355
Query: 255 HLYTWGRGF----NSTSDVNCPQSLPSSL----------SFSQAALGWNHVLVLTGDGEV 300
H++ WG G + + P+ +P +L S+ G +H LT GE+
Sbjct: 356 HVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGEL 415
Query: 301 LMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTEN 354
+ G + G L P V + + + +A G +H + ++
Sbjct: 416 FVWGKNIRGCLGIGRLEDQYFPWRVTMPG-------EPVDVACGVDHMVTLAKS 462
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
V++WG QLG G + ++P Q+ + V +ACG H +AL + G+VF
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA-----DGEVF 150
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
+WG + GQ+G G + P+ VT H + I+ G S V D+G ++ G
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNC-LHIKRVVGIACGQTSSMAVLDNGEVYGWGYNG 209
Query: 155 FGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLG 214
GQLG G+ + +PV+V++ + V+QI CG H+L L + L +Y +G+ GQLG
Sbjct: 210 NGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGL---LYAWGANTYGQLG 266
Query: 215 VSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGR 261
++ L I + +V I+A + SAA + GH+Y WG+
Sbjct: 267 TGN---KNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 139/317 (43%), Gaps = 29/317 (9%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
LSPQ ++S+ + + L +T +VF +G S LG G+ L P
Sbjct: 13 LSPQ--EIASIRKACVFGTSASEALYVTD-----NDEVFVFGLNYSNCLGTGDNQSTLVP 65
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKV-SS 174
K + G + +G H ++ G ++ G + QLG+G +PV+V ++
Sbjct: 66 KKLEGLCGKKIKSLSYGSG-PHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTN 124
Query: 175 FVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHD 234
+ K V ++ACG HS+ L D +V+ +G GQ+G S + +VT LH
Sbjct: 125 LLIKQVVEVACGSHHSMALAAD---GEVFAWGYNNCGQVG-SGSTANQPTPRKVTNCLHI 180
Query: 235 IEIVGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQSLPS--SLSFSQAAL 286
+VGI+ S A+ G +Y WG G + + P + + S+ +Q
Sbjct: 181 KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA--G 344
G+ H L LT +G + G + +G L + + P + +EK +V++IAA
Sbjct: 241 GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK------ERVVEIAACHS 294
Query: 345 AEHSAVVTENRAIMTWG 361
A SA T+ + WG
Sbjct: 295 AHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V++WG GQ+G+G ++ +P ++ N + V +ACG +A+ G+V
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD-----NGEV 202
Query: 94 FSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDG 153
+ WG +GQLG G + L P V H + I G+ H+ ++D G L+ G
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAAL--HSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 154 TFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQL 213
T+GQLG G+ + SP + + V AC H+ G VY +G RGQ
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQ--GGHVYMWGQC-RGQ- 316
Query: 214 GVSKDRIRSVSLPQVT 229
SV LP +T
Sbjct: 317 --------SVILPHLT 324
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 200 NQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAE-GHLYT 258
++V+ FG LG ++ S +P+ GL +I +S LS E G +Y
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQ--STLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYA 98
Query: 259 WGR------GFNSTSDVNCPQSLPSSLSFSQA---ALGWNHVLVLTGDGEVLMLGGSHHG 309
WG G +T+ P + ++L Q A G +H + L DGEV G ++ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 310 MLSDPERVSSTRPLSVALEKVSNLDGVK-VIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
+ + P KV+N +K V+ IA G S V +N + WG+ +GQL
Sbjct: 159 QVGSGSTANQPTP-----RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQL 213
Query: 369 GLGNTCDQIHP-KVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
GLGN +Q+ P +V L N ++ CG T A++
Sbjct: 214 GLGNNGNQLTPVRVAALHSVCVN-----QIVCGYAHTLALT 249
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 123/300 (41%), Gaps = 27/300 (9%)
Query: 130 HISAGWNHSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+ AG H V+ L+T G GQLGHGD S+ P V K +HQ++
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVS 432
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG ++ + + Q+Y FGS G +GV K V P + +S
Sbjct: 433 CGDDFTVCVTDE---GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGD 489
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTG 296
+ L+ +Y+WG G +S D PQ +P +L G + +LT
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 297 DGEVLMLGGSHHGMLSDPERVSST--------RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G+VL G + L + +S P + + L K+ IA G H+
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
A + E ++T+G + GQLG+GN ++ + LG + + V CG FT A +
Sbjct: 610 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL--LGGPLGGKQV-IRVSCGDEFTIAAT 666
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 153/372 (41%), Gaps = 65/372 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG G +PQ L+ + S S + G H +T + ++
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVT-----VEKEL 390
Query: 94 FSW-----GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
++W G GQLGHG+ PK V G I +S G + + V+D G L+
Sbjct: 391 YTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIHQVSCGDDFTVCVTDEGQLY 448
Query: 149 TCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G +G +G P++++ F++ V Q++CG H +VL ++ +VY +G
Sbjct: 449 AFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRN---KEVYSWG 505
Query: 207 SGKRGQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ G+LG+ + + V +P+ I IV + D + L+ G + G
Sbjct: 506 CGEYGRLGLDSEEDYYTPQRVDVPKALI------IVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 263 -FNSTSDVNCP---------QSLPSSLSFSQA-----------ALGWNHVLVLTGDGEVL 301
FN C +P + SF+ A A G H + G +L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L + + L + L L G +VI+++ G E + T++ I WG
Sbjct: 620 TFGCNKCGQLG---VGNYKKRLGINLLG-GPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 362 WGEHGQLGLGNT 373
G +G+L + T
Sbjct: 676 NGGNGRLAMTPT 687
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 146/353 (41%), Gaps = 44/353 (12%)
Query: 77 AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN 136
A + +TS SS +V+ WG G + P+ + F G + + AG
Sbjct: 319 APIAVVTSRSS----EVYVWGGGKTT------------PQKLDVFKGG-WRARQVCAGDA 361
Query: 137 HSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSL 191
H V+ L+T G GQLGHGD S+ P V K+V +++CG ++
Sbjct: 362 HFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTV 421
Query: 192 VLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALS 251
+ + Q+Y FGS G LGV++ V P + + + +S AL+
Sbjct: 422 CITDE---GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALT 478
Query: 252 AEGHLYTWG------RGFNSTSDVNCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLML 303
+Y+WG G +S DV PQ + L G + +LT G+VL
Sbjct: 479 RSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLAC 538
Query: 304 GGSHHGMLSDPERVS--------STRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENR 355
G + H L + + P + +L L K+ I+ G H+A + E
Sbjct: 539 GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERG 598
Query: 356 AIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
++T+G + GQLG+G+ + H + LG + + V CG FT A +
Sbjct: 599 RLLTFGSNKCGQLGVGDY--RKHLGINLLGGPLGGKQV-IRVSCGDEFTTAAT 648
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 167/404 (41%), Gaps = 73/404 (18%)
Query: 6 MEETEKGKSALIN--NAKPKIEEEEEEQQVV------KVWSWGAGTDGQLGTGRLHDELS 57
MEE K +++N N KP+ E V +V+ WG G + +
Sbjct: 297 MEE----KVSMLNRSNKKPRTGTVTEAPIAVVTSRSSEVYVWGGG------------KTT 340
Query: 58 PQLLNLSSLSSVSMLACGG-AHVLALTSPSSVIGGKVFSW-----GRGSSGQLGHGEMVD 111
PQ L++ + C G AH +T + ++++W G GQLGHG+
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVT-----VEKELYTWVNMQGGSKLHGQLGHGDRAS 395
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS--SP 169
PK V G ++ +S G + + ++D G L++ G +G LG P
Sbjct: 396 YRQPKHVEKLQGK--SVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEP 453
Query: 170 VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQV 228
+ V F+N+ V Q++CG H + L + VY +G G+ G+LG+ S+D + S +V
Sbjct: 454 LLVDFFLNEPVDQVSCGDSHIMALTR---SKSVYSWGCGEYGRLGLDSEDDVYSPQKVEV 510
Query: 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----------CPQSLPSS 278
GL IV + D S L+ G + G ++ +N Q +P +
Sbjct: 511 QRGLC---IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYT 567
Query: 279 LSFSQA-----------ALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRP-LSVA 326
S + A + G H + G +L G + G L V R L +
Sbjct: 568 TSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG----VGDYRKHLGIN 623
Query: 327 LEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
L L G +VI+++ G E + T + I WG G +G+L +
Sbjct: 624 LLG-GPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACG--GAHVLALTSPSSVIGGKV 93
V+SWG G G+LG D SPQ + + + + CG G+ +L LT GKV
Sbjct: 483 VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLT-------GKV 535
Query: 94 FSWGRGSSGQLG----------HGEMVDALYPKPVTFFDG-HRYTITHISAGWNHSGFVS 142
+ G +LG H + Y +T Y I IS G H+ +
Sbjct: 536 LACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAID 595
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV-NKNVHQIACGMRHSLVLLKDCLGNQ 201
+ G L T G GQLG GDYR H + + K V +++CG + D N
Sbjct: 596 ERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATAD---NH 652
Query: 202 VYGFGSGKRGQLGVSKD 218
++ +G+G G+L ++ +
Sbjct: 653 IFAWGNGGNGRLAMTPN 669
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 122/300 (40%), Gaps = 27/300 (9%)
Query: 130 HISAGWNHSGFVSDSGCLFTC-----GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+ AG H V+ L+T G GQLGHGD S+ P V K + Q++
Sbjct: 373 QVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVS 432
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
CG ++ + + Q+Y FGS G +GV K V P + +S
Sbjct: 433 CGDDFTVCVTDE---GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGD 489
Query: 245 DRSAALSAEGHLYTWG------RGFNSTSDVNCPQSL--PSSLSFSQAALGWNHVLVLTG 296
+ L+ +Y+WG G +S D PQ + P +L G + +LT
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 297 DGEVLMLGGSHHGMLSDPERVSST--------RPLSVALEKVSNLDGVKVIQIAAGAEHS 348
G+VL G + L + +S P + + L K+ IA G H+
Sbjct: 550 SGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHT 609
Query: 349 AVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408
A + E ++T+G + GQLG+GN ++ + LG + + V CG FT A +
Sbjct: 610 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL--LGGPLGGKQV-IRVSCGDEFTIAAT 666
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 153/372 (41%), Gaps = 65/372 (17%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLN-LSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V+ WG G +PQ L+ + S S + G H +T + ++
Sbjct: 348 EVYVWGGGKS------------TPQKLDVIKSGCSARQVCAGNTHFAVVT-----VEKEL 390
Query: 94 FSW-----GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148
++W G GQLGHG+ PK V G I +S G + + V+D G L+
Sbjct: 391 YTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK--AIRQVSCGDDFTVCVTDEGQLY 448
Query: 149 TCGDGTFGQLGHGDYRSHS--SPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
G +G +G P++++ F++ V Q++CG H +VL ++ +VY +G
Sbjct: 449 AFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRN---KEVYSWG 505
Query: 207 SGKRGQLGVSKDR----IRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
G+ G+LG+ + + V +P+ I IV + D + L+ G + G
Sbjct: 506 CGEYGRLGLDSEEDYYTPQKVDVPKALI------IVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 263 -FNSTSDVNCP---------QSLPSSLSFSQA-----------ALGWNHVLVLTGDGEVL 301
FN C +P + SF+ A A G H + G +L
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLL 619
Query: 302 MLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWG 361
G + G L + + L + L L G +VI+++ G E + T++ I WG
Sbjct: 620 TFGCNKCGQLG---VGNYKKRLGINLLG-GPLGGKQVIRVSCGDEFTIAATDDNHIFAWG 675
Query: 362 WGEHGQLGLGNT 373
G +G+L + T
Sbjct: 676 NGGNGRLAMTPT 687
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 149/384 (38%), Gaps = 64/384 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G LGT L +LN + V +A G +T G++
Sbjct: 314 VYAWGGG----LGT-----PLRLPMLN----TEVVQVAAGRTQKAGVTR-----SGRLIL 355
Query: 96 WGRGSSGQLGHGEMVDAL-YPKP---VTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTC 150
W G G + A+ P+P F +G TI H++ G + ++D G + T
Sbjct: 356 WEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTF 415
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+ G LGHG S P V + + + Q+ACG H L L + +++ +G G
Sbjct: 416 GSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTE---RELFAWGRGDS 472
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN----- 264
G+LG+ S S PQ E + D S L+ G G FN
Sbjct: 473 GRLGLGTR--ESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLD 530
Query: 265 --STSDVNCP-QSLPSSLSFS-------------QAALGWNHVLVLTGDGEVLMLGGSHH 308
S + P Q + +LSF+ LG H +T G+ G + H
Sbjct: 531 HLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQH 590
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L R S P KV L+G+K+ +A G + + + +WG G G+L
Sbjct: 591 GQLGTNTRRGSRAPC-----KVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRL 645
Query: 369 GLGN---------TCDQIHPKVVN 383
G + D+ HP V
Sbjct: 646 GRRDEDAGLPRPVQLDETHPYTVT 669
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 20/192 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G PQ + + + CG + LT P G+
Sbjct: 463 ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVP-----GQAL 517
Query: 95 SWGRGSSGQLG------------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
+ G +LG H ++ +AL + + + I G HS V+
Sbjct: 518 ACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVT 577
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
SG +T G GQLG R +P KV + +ACG ++ + + ++V
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAE---SEV 634
Query: 203 YGFGSGKRGQLG 214
Y +G G RG+LG
Sbjct: 635 YSWGKGARGRLG 646
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 37 WSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSW 96
+++G+ GQLGT +P + ++M+ACG A +A+ + S +V+SW
Sbjct: 583 YTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAES-----EVYSW 637
Query: 97 GRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
G+G+ G+LG + DA P+PV + H YT+T +S
Sbjct: 638 GKGARGRLGRRDE-DAGLPRPVQLDETHPYTVTSVS 672
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 28/190 (14%)
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTW-----GRGFNSTSDVNCPQSLP------ 276
+ + + + E+V ++A + A ++ G L W G G S Q P
Sbjct: 325 LRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRF 384
Query: 277 ----SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN 332
S ++ A G LT G ++ G +G L ++P V
Sbjct: 385 LEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQP-----TIVEA 439
Query: 333 LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNL--GDEFQN 390
L G +++Q+A GA H ++ R + WG G+ G+LGLG P+ V + G E Q
Sbjct: 440 LLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQR 499
Query: 391 RDTQLEVFCG 400
V CG
Sbjct: 500 ------VVCG 503
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 184/464 (39%), Gaps = 87/464 (18%)
Query: 7 EETEKGKSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL 66
++ K ++ I NA+ + Q + ++ WG G+ +LG G L + L+
Sbjct: 19 KKMSKTHASHIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPF 78
Query: 67 -----SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG-------------- 107
+ + A GG H LAL S+V +SWG G LG
Sbjct: 79 LPRDEAKIISFAVGGMHTLALDEESNV-----WSWGCNDVGALGRDTSNAKEQLKDMDAD 133
Query: 108 -------------EMVDALYPKP--VTFFDGHRYTITHISAGWNHSGFVSDSGCL----- 147
E A P+ +GH+ + ++A N S + +G +
Sbjct: 134 DSSDDEDGDLNELESTPAKIPRESFPPLAEGHK--VVQLAATDNMSCALFSNGEVYAWGT 191
Query: 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207
F C +G G + +P KV +F N+ Q+A G H L L ++ + V+ +G+
Sbjct: 192 FRCNEGILG-FYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGM---VFAWGN 247
Query: 208 GKRGQLGVS-KDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG------ 260
G++ QLG +R R +L GL ++ + N AL+ + L +WG
Sbjct: 248 GQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGEN--HCFALTKDNKLVSWGLNQFGQ 305
Query: 261 ----RGFNSTSDVNCPQ--SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHH---GML 311
+ V P+ +LP ++ A G +H L+L+ DG++ G G+
Sbjct: 306 CGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIP 365
Query: 312 SD--PERV-------SSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGW 362
D PE + PL L V K +AAG+ HS V +N +WG+
Sbjct: 366 KDNLPEYTYKDVHGKARAVPLPTKLNNVP-----KFKSVAAGSHHSVAVAQNGIAYSWGF 420
Query: 363 GEHGQLGLGNTCD--QIHPKVVNLGDEFQNRDTQLEVFCGSGFT 404
GE +GLG D ++ ++ N + N + V CG F+
Sbjct: 421 GETYAVGLGPFEDDTEVPTRIKNTATQDHN---IILVGCGGQFS 461
>sp|O42645|YF94_SCHPO RCC1 repeat-containing protein C10F6.04 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC10F6.04 PE=4 SV=1
Length = 351
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 165/364 (45%), Gaps = 56/364 (15%)
Query: 38 SWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG 97
S G+ + QLG D SPQ++ ++ ++CGG H L L S ++++ G
Sbjct: 4 SLGSNGNFQLGLNNDEDVYSPQIVPFDR--AIEKISCGGNHTLLLDEDS-----QLWACG 56
Query: 98 RGSSGQLGHGEMVDALY----PKPVTFFDG---HRYTITHISAGWNHSGFV-SDSGCLFT 149
GQ G+ E+ + LY P + F R+ ++ GW S V +D + +
Sbjct: 57 DNRKGQCGY-EVKEPLYNPLSPDYLRIFTRVSHERWVF--LTCGWEFSVIVHADRRRVCS 113
Query: 150 CGDGTFGQLGHGDYRSHSS---PVKVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGF 205
CG+G G+LG G+ RS+S + + +K + I+ G+RH + + + GN +YG
Sbjct: 114 CGEGLSGELGQGN-RSNSQGLREIDIPYLDDKEFIIDISAGLRHWICVTNE--GN-LYGC 169
Query: 206 GSGKRGQLG-VSKDRIRSVSLPQVTIGLHDIEIVGISANGDR-SAALSAEGHLYTWG-RG 262
G G++GQLG V + VS L IE G + SA L GH+ G
Sbjct: 170 GDGRKGQLGPVVMKTVNKVSF------LGRIEHAQAVVCGVQFSAVLQETGHVIVLGGEK 223
Query: 263 FNSTSDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
+N ++ + Q+ S LS S ++ W+ + +L+ +G V G D + + T
Sbjct: 224 WNVAAECDAWQANNSELSSSICSISANWSTLSLLSTEGCVYAFG------RCDRAQKAHT 277
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPK 380
+ ++QIA+G EH+ + T+ +++ +GW EHG + D K
Sbjct: 278 K-------------ASDIVQIASGTEHNILRTKKGSVLIYGWNEHGNASNDDKRDVYDAK 324
Query: 381 VVNL 384
+ L
Sbjct: 325 TLQL 328
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 175/409 (42%), Gaps = 63/409 (15%)
Query: 35 KVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKV 93
+V + G G GQLG G + + P L+ L+ + A GG H + L + G +
Sbjct: 42 QVLTLGQGDVGQLGLGEDIMERKKPALVTLTE--DIVQAAAGGMHTVCLGAS-----GSI 94
Query: 94 FSWGRGSSGQLGH--GEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+++G G LG E + P V + + +SAG +H+ +++ G +F G
Sbjct: 95 YTFGCNDEGALGRDTSEEGSEMQPGKVELAE----KVVQVSAGDSHTAALTEDGRVFVFG 150
Query: 152 -----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFG 206
+G G L + PV+V +N V +IA G H ++L D +Y G
Sbjct: 151 SFRDNNGVIGLLE--PMKKSMVPVQVQ--INTPVIKIASGNDHLVLLTVD---GDLYTSG 203
Query: 207 SGKRGQLGVSKDR---------IRSVSLPQV----TIGLHDIEIVGISANGDRSAALSAE 253
G++GQLG +R + + +PQ G + + + A+S E
Sbjct: 204 CGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQE 263
Query: 254 GHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAALGWN----HVLVLTGDGEVLML 303
GH+Y +G G +T PQ+L S + +++ +G++ H + + +G+ L
Sbjct: 264 GHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSL 323
Query: 304 GGSHHGML---SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360
G + +G L + E S P+ D K+ +A+GA S V+ + + W
Sbjct: 324 GRAEYGRLGLGENAEEQSEPTPIP---------DLPKINSVASGASVSYAVSTDGCVFAW 374
Query: 361 GWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
G G + QLG G D P+ + G ++R+ L V G T + R
Sbjct: 375 GMGTNLQLGTGEEEDVWSPEQMT-GKHLEDREV-LSVSSGGQHTVLLVR 421
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 30/234 (12%)
Query: 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257
+G QV G G GQLG+ +D + VT+ +IV +A G + L A G +Y
Sbjct: 39 VGGQVLTLGQGDVGQLGLGEDIMERKKPALVTL---TEDIVQAAAGGMHTVCLGASGSIY 95
Query: 258 TWG--------RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGG--SH 307
T+G R + P + + Q + G +H LT DG V + G +
Sbjct: 96 TFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDN 155
Query: 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQ 367
+G++ E P+ ++ V VI+IA+G +H ++T + + T G GE GQ
Sbjct: 156 NGVIGLLE------PMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQ 209
Query: 368 LG-----LGNTCDQ------IHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410
LG N + + P+ ++L + R +VFCG+ FT+A+S+
Sbjct: 210 LGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQE 263
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 45/331 (13%)
Query: 82 LTSPS-SVIGGKVFSWGRGSSGQLGHGE-MVDALYPKPVTFFDGHRYTITHISAGWNHSG 139
+T PS +GG+V + G+G GQLG GE +++ P VT + I +AG H+
Sbjct: 31 VTHPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTE----DIVQAAAGGMHTV 86
Query: 140 FVSDSGCLFTCGDGTFGQLGH--GDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDC 197
+ SG ++T G G LG + S P KV + + V Q++ G H+ L +D
Sbjct: 87 CLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE--LAEKVVQVSAGDSHTAALTED- 143
Query: 198 LGNQVYGFGSGK--RGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGH 255
+V+ FGS + G +G+ + +S+ QV I + ++ I++ D L+ +G
Sbjct: 144 --GRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQI---NTPVIKIASGNDHLVLLTVDGD 198
Query: 256 LYTWG-----------------RGFNSTSDVNCPQSL------PSSLSFSQAALGWNHVL 292
LYT G G + PQ + + F G
Sbjct: 199 LYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTF 258
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
++ +G V G S++ L + P ++ K S I + G H+ V
Sbjct: 259 AVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKS---WIGFSGGQHHTVCVD 315
Query: 353 ENRAIMTWGWGEHGQLGLG-NTCDQIHPKVV 382
+ G E+G+LGLG N +Q P +
Sbjct: 316 SEGKAYSLGRAEYGRLGLGENAEEQSEPTPI 346
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERV-SSTRP 322
N TSDV ++LP S +G G+VL LG G L E + +P
Sbjct: 17 NGTSDVKKTKALPIVTHPSHGTVG----------GQVLTLGQGDVGQLGLGEDIMERKKP 66
Query: 323 LSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCD--QIHPK 380
V L + ++Q AAG H+ + + +I T+G + G LG + + ++ P
Sbjct: 67 ALVTLTE-------DIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPG 119
Query: 381 VVNLGDEFQNRDTQLEVFCGSGFTYAISR 409
V L ++ ++V G T A++
Sbjct: 120 KVELAEKV------VQVSAGDSHTAALTE 142
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLAC--GGAHVLALTSPSS 87
V++WG GT+ QLGTG D SP+ + L +L+ GG H + L S
Sbjct: 371 VFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLVRKRS 424
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 169/401 (42%), Gaps = 67/401 (16%)
Query: 23 KIEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDEL--SPQLLNLSSLSSVSM--LACGGAH 78
KI E E+ + V+ +G+G+ +LG G ++ P+L + S V + LA GG H
Sbjct: 62 KIPELPTER--LNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMH 119
Query: 79 VLALTSPSSVIGGKVFSWGRGSSGQLG---------HGEMVDALY----PKPVTFFDGHR 125
AL+ G+V++WG LG +G+ VD P V H
Sbjct: 120 SAALSH-----DGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSH- 173
Query: 126 YTITHISAGWNHSGFVSDSGCLFT-----CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNV 180
+T + N + ++D+GC FT C DG LG+ D + ++ + + +
Sbjct: 174 LRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGV---LGYSDSQKRTA--EPTQMRLPEI 228
Query: 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK-DRIRSVSLPQVTIGLHDIEIVG 239
Q+A G H + L +VY +G+G++ QLG +R R L + L +I +
Sbjct: 229 CQLATGTDHIIAL---TTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNI--IS 283
Query: 240 ISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ----SLPSSLSFSQAALGWN------ 289
+ A S A+ +G +Y WG + ++ + + A G+N
Sbjct: 284 VGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITG 343
Query: 290 ---HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSN---------LDGV- 336
H L L DG VL G L P+ + P +V ++ N + G+
Sbjct: 344 GEHHTLALLEDGRVLAWGRDDRHQLGIPD---NALPETVVKDEKGNNYYLSTPTIIPGLT 400
Query: 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377
VIQ+ G H+ VT + + +WG E+ ++G G+ + +
Sbjct: 401 NVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV 441
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 173/409 (42%), Gaps = 57/409 (13%)
Query: 15 ALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSMLA 73
A+ + K K+ + V + G G GQLG G + + P L+++ V
Sbjct: 16 AIPKSKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAE 73
Query: 74 CGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTITHI 131
GG H + L+ G+V+S+G G LG V+ + P V + + +
Sbjct: 74 AGGMHTVCLSK-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL----QEKVVQV 124
Query: 132 SAGWNHSGFVSDSGCLFTCG-----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG 186
SAG +H+ ++D G +F G +G G L + PV+V ++ V ++A G
Sbjct: 125 SAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE--PMKKSMVPVQVQ--LDVPVVKVASG 180
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
H ++L D +Y G G++GQLG + + Q L + V + + G R
Sbjct: 181 NDHLVMLTAD---GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSR 237
Query: 247 --------------SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQAAL 286
+ A+S EGH+Y +G G T PQ+L S + +++ +
Sbjct: 238 GHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWV 297
Query: 287 GWN----HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342
G++ H + + +G+ LG + +G L E ++ +S L V +A
Sbjct: 298 GFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTL----ISRLPAVS--SVA 351
Query: 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
GA VT++ + WG G + QLG G D P V +G + +NR
Sbjct: 352 CGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMMGKQLENR 399
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 45/236 (19%)
Query: 202 VYGFGSGKRGQLGVSKDRIRS-----VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHL 256
V G G GQLG+ ++ + VS+P+ ++V A G + LS G +
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--------DVVQAEAGGMHTVCLSKSGQV 88
Query: 257 YTWG----RGFNSTSDVNCPQSLPSSLSFS----QAALGWNHVLVLTGDGEVLMLGG--S 306
Y++G + V + +P + Q + G +H LT DG V + G
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 307 HHGM--LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364
++G+ L +P + S P+ V L+ V V+++A+G +H ++T + + T G GE
Sbjct: 149 NNGVIGLLEPMK-KSMVPVQVQLD-------VPVVKVASGNDHLVMLTADGDLYTLGCGE 200
Query: 365 HGQLG-----LGNTCDQ------IHPKVVNLGDEFQNRDTQLE-VFCGSGFTYAIS 408
GQLG N + + PK V L + + FCG+ FT+AIS
Sbjct: 201 QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS 256
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K +S G G+LG G +E S L +S L +VS +ACG + A+T G+VF
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTL-ISRLPAVSSVACGASVGYAVTKD-----GRVF 367
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
+WG G++ QLG G+ DA P + + +S+G H+
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHT 411
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 147/364 (40%), Gaps = 64/364 (17%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG+G L L+ E V ++ G + +T G++ +
Sbjct: 322 VYTWGSGISTPLRLPMLNTE-------------VIQVSLGRTQKMGVTK-----SGRLIT 363
Query: 96 WGRGS--SGQLGHGEMVDALYPKPVT-FFDGHR-YTITHISAGWNHSGFVSDSGCLFTCG 151
W S SG+ V+ + P+ ++ F +G TI +S G + ++D G + T G
Sbjct: 364 WEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFG 423
Query: 152 DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRG 211
G+ G LGHG++ + P V + + + Q++CG H L + + +V+ +G G G
Sbjct: 424 SGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNE---REVFSWGRGDNG 480
Query: 212 QLGV----SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGR------ 261
+LG+ S + + VSLP D E + D S +S + + G
Sbjct: 481 RLGLATQDSHNCPQQVSLPA------DFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKL 534
Query: 262 GFNSTSDVNCPQSLPSS-----LSFSQAA-----------LGWNHVLVLTGDGEVLMLGG 305
G + S P S Q+A +G H + +T G+ G
Sbjct: 535 GLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGS 594
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
+ HG L R SS P +VS L G+ + A G + + + TWG G
Sbjct: 595 NQHGQLGCSHRRSSRVPY-----QVSGLQGITM--AACGDAFTLAIGAEGEVYTWGKGAR 647
Query: 366 GQLG 369
G+LG
Sbjct: 648 GRLG 651
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+ +++G+ GQLG P +S L ++M ACG A LA+ + G+V+
Sbjct: 588 QCFTFGSNQHGQLGCSHRRSSRVP--YQVSGLQGITMAACGDAFTLAIGAE-----GEVY 640
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA 133
+WG+G+ G+LG E D PKPV + H +T+T ++
Sbjct: 641 TWGKGARGRLGRKEE-DFGIPKPVQLDESHAFTVTSVAC 678
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 44/228 (19%)
Query: 187 MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
M H L L VY +GSG +S P + + + + E++ +S +
Sbjct: 313 MMHPLPLFS------VYTWGSG--------------ISTP-LRLPMLNTEVIQVSLGRTQ 351
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCP----QSLP----------SSLSFSQAALGWNHVL 292
++ G L TW + + P Q P S ++ + G
Sbjct: 352 KMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTT 411
Query: 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT 352
LT G ++ G +G L T+P + V L G +++Q++ GA H VT
Sbjct: 412 CLTDRGIIMTFGSGSNGCLGHGNFNDVTQP-----KIVEALLGYELVQVSCGASHVLAVT 466
Query: 353 ENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCG 400
R + +WG G++G+LGL P+ V+L +F+ + V CG
Sbjct: 467 NEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQ----RVLCG 510
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 22/248 (8%)
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
Y S +P Q+ G H+L+L D G QV+ +G G+ GQLG + +
Sbjct: 143 YVSPRAPFYRPLAPELRARQLELGAEHALLL--DAAG-QVFSWGGGRHGQLG--HGTLEA 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFS 282
P++ L + + ++A G S +S G +Y WG +N + + +LP+
Sbjct: 198 ELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG--WNESGQL----ALPTRNLAE 251
Query: 283 QAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI 341
L DG +V GG+ G P + +P L+ D VK
Sbjct: 252 DGETVAREATELNEDGSQVKRTGGAEDGA---PAPFIAVQPFPALLDLPMGSDAVKA--- 305
Query: 342 AAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCG 400
+ G+ H+AVVT + TWGWG++GQLG +T P+ V F ++ Q++ V CG
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY---FVDKQLQVKAVTCG 362
Query: 401 SGFTYAIS 408
TY +
Sbjct: 363 PWNTYVYA 370
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 80/196 (40%), Gaps = 43/196 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L EL P+LL ++ +A GG H + ++ G ++
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSE-----TGDIY 232
Query: 95 SWGRGSSGQLG--------HGEMVD----------------------------ALYPKPV 118
WG SGQL GE V A+ P P
Sbjct: 233 IWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPA 292
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K
Sbjct: 293 LLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDK 352
Query: 179 --NVHQIACGMRHSLV 192
V + CG ++ V
Sbjct: 353 QLQVKAVTCGPWNTYV 368
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 85/214 (39%), Gaps = 59/214 (27%)
Query: 52 LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+ L+P+L L G H L L + G+VFSWG G GQLGHG +
Sbjct: 150 FYRPLAPEL-------RARQLELGAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEA 197
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQL------------- 158
L P+ + G + ++AG HS VS++G ++ G GQL
Sbjct: 198 ELEPRLLEALQG--LVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGET 255
Query: 159 ------------------GHGDYRSHSSPVKVSSF-------VNKNVHQIACGMRHSLVL 193
G + + + + V F + + + +CG RH+ V+
Sbjct: 256 VAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVV 315
Query: 194 LKDCLGNQVYGFGSGKRGQLG----VSKDRIRSV 223
+ ++Y +G GK GQLG S DR R V
Sbjct: 316 TRT---GELYTWGWGKYGQLGHEDTTSLDRPRRV 346
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 11/196 (5%)
Query: 130 HISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH 189
+ G H+ + +G +F+ G G GQLGHG + P + + + ++A G H
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWH 221
Query: 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAA 249
S+ + + +Y +G + GQL + R+++ T+ E+ N D S
Sbjct: 222 SVCVSET---GDIYIWGWNESGQLALP---TRNLAEDGETVAREATEL-----NEDGSQV 270
Query: 250 LSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHG 309
G F + LP +A+ G H V+T GE+ G +G
Sbjct: 271 KRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYG 330
Query: 310 MLSDPERVSSTRPLSV 325
L + S RP V
Sbjct: 331 QLGHEDTTSLDRPRRV 346
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKP 117
P LL+L S +CG H +T G++++WG G GQLGH + P+
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTR-----TGELYTWGWGKYGQLGHEDTTSLDRPRR 345
Query: 118 VTFFDGHRYTITHISAG-WNHSGFVSDSG 145
V +F + + ++ G WN + + G
Sbjct: 346 VEYFVDKQLQVKAVTCGPWNTYVYAVEKG 374
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 174/413 (42%), Gaps = 61/413 (14%)
Query: 13 KSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSM 71
+ A+ + K K+ + + V + G G GQLG G + + P L+ L L V
Sbjct: 14 EDAIPKSKKVKVSHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPL--LQDVVQ 71
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTIT 129
GG H + L G+V+S+G G LG V+ + P V + +
Sbjct: 72 AEAGGMHTVCLNQ-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL----QEKVV 122
Query: 130 HISAGWNHSGFVSDSGCLFTCG-----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+SAG +H+ +++ G +F G +G G L + PV+V ++ V ++A
Sbjct: 123 QVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE--PMKKSMVPVQVQ--LDMPVVKVA 178
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
G H ++L D +Y G G++GQLG + + Q L + V + + G
Sbjct: 179 SGNDHLVMLTTD---GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRG 235
Query: 245 DR--------------SAALSAEGHLYTWGR------GFNSTSDVNCPQSLPSSLSFSQA 284
R + A+S EGH+Y +G G T+ PQ+L S + +++
Sbjct: 236 SRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKS 295
Query: 285 ALGWN----HVLVLTGDGEVLMLGGSHHGMLSDPE--RVSSTRPLSVALEKVSNLDGVKV 338
+G++ H + + +G+ LG + +G L E S L L VS+
Sbjct: 296 WVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS------ 349
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+A GA V+++ + WG G + QLG G D P V G + +NR
Sbjct: 350 --VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMTGKQLENR 399
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ + + P + L D+ V A G + L+ G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKK-PALVPLLQDV--VQAEAGGMHTVCLNQSGQVYSFGC 93
Query: 261 ---RGFNSTSDVNCPQSLPSSLSFS----QAALGWNHVLVLTGDGEVLMLGG--SHHGM- 310
+ V + +P + Q + G +H LT DG V + G ++G+
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI 153
Query: 311 -LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L +P + S P+ V L+ + V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMK-KSMVPVQVQLD-------MPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDE-FQNRDTQLEVFCGSGFTYAISRH 410
N + + PK V L + R + FCG+ T+AISR
Sbjct: 206 RVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISRE 258
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
K +S G G+LG G +E S L +S L VS +ACG + A++ G+VF
Sbjct: 314 KAYSLGRAEYGRLGLGEGAEEKSIPTL-ISRLPVVSSVACGASVGYAVSK-----DGRVF 367
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHS 138
+WG G++ QLG G+ DA P +T + +S+G H+
Sbjct: 368 AWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHT 411
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 154/384 (40%), Gaps = 64/384 (16%)
Query: 36 VWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
V++WG G L L+ E V +A G +T G++
Sbjct: 320 VYAWGGGLSSPLRLPMLNTE-------------VVQVAAGRTQKAGVTR-----SGRLIL 361
Query: 96 WGRGSSGQLGHGEMVDAL-YPKP---VTFFDGHR-YTITHISAGWNHSGFVSDSGCLFTC 150
W G G + A+ P+P F +G TI H++ G + ++D G + T
Sbjct: 362 WEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTF 421
Query: 151 GDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210
G G+ G LGHG+ S P V + + + Q+ACG H L L D +++ +G G
Sbjct: 422 GSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTD---GELFAWGRGDG 478
Query: 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRG-FN----- 264
G+LG+ S + PQ E + D S L++ G + G FN
Sbjct: 479 GRLGLGTR--ESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLD 536
Query: 265 --STSDVNCP-QSLPSSLSFSQ-------------AALGWNHVLVLTGDGEVLMLGGSHH 308
S + P Q + +LSF+ LG H +T G+ G + H
Sbjct: 537 HLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQH 596
Query: 309 GMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQL 368
G L +S+R +S A +V L+G+K++ +A G + V + +WG G G+L
Sbjct: 597 GQLG-----TSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRL 651
Query: 369 GLGN---------TCDQIHPKVVN 383
G + D+ HP +V
Sbjct: 652 GRRDEDAGLPRPVQLDETHPYMVT 675
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 37 WSWGAGTDGQLGTGRLHDELSP-QLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFS 95
+++G+ GQLGT +P ++ L + V M+ACG A +A+ + G+V+S
Sbjct: 589 YTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMV-MVACGDAFTVAVGA-----EGEVYS 642
Query: 96 WGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHIS 132
WG+G+ G+LG + DA P+PV + H Y +T +S
Sbjct: 643 WGKGTRGRLGRRDE-DAGLPRPVQLDETHPYMVTSVS 678
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 20/192 (10%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
++++WG G G+LG G PQ + ++ + CG + LTSP G+V
Sbjct: 469 ELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSP-----GRVL 523
Query: 95 SWGRGSSGQLG------------HGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142
+ G +LG + ++ +AL P+ + + + G HS ++
Sbjct: 524 ACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAIT 583
Query: 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202
SG +T G GQLG R +P +V + +ACG ++ + + +V
Sbjct: 584 ASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAE---GEV 640
Query: 203 YGFGSGKRGQLG 214
Y +G G RG+LG
Sbjct: 641 YSWGKGTRGRLG 652
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 50/183 (27%)
Query: 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG 287
+ + + + E+V ++A + A ++ G L W LG
Sbjct: 331 LRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW----------------------EAPPLG 368
Query: 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347
+L G E L P+ VS + GV + +A G
Sbjct: 369 AGGGTLLPGAVE-----------LPQPQFVSRF---------LEGQSGVTIKHVACGDLF 408
Query: 348 SAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN--LGDEFQNRDTQLEVFCGSGFTY 405
+A +T+ IMT+G G +G LG GN D P +V LG E ++V CG+
Sbjct: 409 TACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEM------VQVACGASHVL 462
Query: 406 AIS 408
A+S
Sbjct: 463 ALS 465
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 134/331 (40%), Gaps = 49/331 (14%)
Query: 86 SSVIGGKVFSWGRGSSGQLGHG-EMVDALYPKPVTFF---DGHRY----TITHISAGWNH 137
SS KV+SWG G +G+LGHG + + PK + D +R I I++G +
Sbjct: 62 SSQYSNKVYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKITSGTTY 121
Query: 138 SGF-----VSDSGCLFTCGDGTFGQL--GHGDYRS-------HSSPVKVSSFVNKNVHQI 183
S F + D + CGD QL G+G +S S +K K + Q+
Sbjct: 122 SIFSGYDQIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQL 181
Query: 184 ACGMRHSLVLL------------KDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
G H+ +L KD + + +G+ GQ+G S + R P
Sbjct: 182 ISGTYHNACILNDSNSNNNNNNNKD--RSLILLWGASNSGQIG-SPEYNRVQYDPYNNKV 238
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG----------FNSTSDVNCPQSLPSSLSF 281
L +I I IS + ALS +G LY++G FN L
Sbjct: 239 LSEIGIKKISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEI 298
Query: 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGM-LSDPERVSSTRPLSVALEKVSNL-DGVKVI 339
G+ H + LT D ++L G + PE +V S+L D K+I
Sbjct: 299 IDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKII 358
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
QI A +S ++TEN I + G +HGQ G+
Sbjct: 359 QIGASNLNSYILTENGNIYSIGSNDHGQCGI 389
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 39 WGAGTDGQLGTGRL----HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
WGA GQ+G+ +D + ++L+ + +SM G +AL++ GK++
Sbjct: 213 WGASNSGQIGSPEYNRVQYDPYNNKVLSEIGIKKISM---GATFTIALSND-----GKLY 264
Query: 95 SWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGT 154
S+G + +LG+G+M + PK + I + G+ H+ ++ + T G
Sbjct: 265 SFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDNKILTWGRNQ 324
Query: 155 FGQ-------LGHGDYRSHSSPVKVSSFVNKN-VHQIACGMRHSLVLLKDCLGNQVYGFG 206
Q G G + ++ + SS + + + QI +S +L ++ GN +Y G
Sbjct: 325 ESQCFPVPEGTGKGSF-TNVQYLDTSSLGDHDKIIQIGASNLNSYILTEN--GN-IYSIG 380
Query: 207 SGKRGQLGVSKDRIRSVSLPQVTIGLH-DIEIVGISANGDRSAALSAEGHLYTWGRGFN 264
S GQ G+ K + L ++ IG +I++ + + +G + WG F+
Sbjct: 381 SNDHGQCGIEKSNFKKGILNKIKIGDDGNIKVKKFYSRFKTVIVETTDGRFFGWGSNFD 439
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSL--SSVSMLACGGAHVLALTSPSSVIGGK 92
K++S+G+ T +LG G + +E P+L++ L + + L CG H +ALTS + K
Sbjct: 262 KLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGFFHTVALTSDN-----K 316
Query: 93 VFSWGRGSSGQ-------LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145
+ +WGR Q G G + Y + D + I I A +S ++++G
Sbjct: 317 ILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDK--IIQIGASNLNSYILTENG 374
Query: 146 CLFTCGDGTFGQLG 159
+++ G GQ G
Sbjct: 375 NIYSIGSNDHGQCG 388
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 23/233 (9%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSV---SMLACGGAHVLALTSPSSVIGG 91
++++WG + LG G + P+L+ + S V M+ C H + L+ G
Sbjct: 144 ELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLC-KFHSVFLSQ-----KG 197
Query: 92 KVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG 151
+V++ G G G+LGHG+ + L P+ V GH T ++ +H+ +++ G ++T G
Sbjct: 198 QVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGH--PCTQVAGAKDHTVVLTEDGYVYTFG 255
Query: 152 DGTFGQLGHGDYRSHSS---PVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSG 208
TF QLG +S+ ++ + K V +A G H+++ KD VY G
Sbjct: 256 LNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA----VYTVGLN 311
Query: 209 KRGQLGVSKDR--IRSVSLPQVTIGLH--DIEIVGISANGDRSAALSAEGHLY 257
GQLG +D + VS P+ LH DI I +SA+ + +S G +Y
Sbjct: 312 G-GQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIY 363
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 15/125 (12%)
Query: 256 LYTWGRGFNSTSDVNCPQS---------LPSS-LSFSQAALGWNHVLVLTGDGEVLMLGG 305
LYTWG N T QS P S + Q L H + L+ G+V G
Sbjct: 145 LYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGH 204
Query: 306 SHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365
G L + ++ P V L G Q+A +H+ V+TE+ + T+G
Sbjct: 205 GQGGRLGHGDELTCLVP-----RLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTF 259
Query: 366 GQLGL 370
QLG+
Sbjct: 260 HQLGI 264
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 24/234 (10%)
Query: 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIV 238
V Q+ G H L+L C QV+ +G+G+ GQLG + + P++ L + +
Sbjct: 162 RVRQLELGAEHVLLL---CAAGQVFSWGAGRHGQLG--HGTLEAELEPRLLEALQGLRMA 216
Query: 239 GISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDG 298
++A G S LS G +Y WG +N + + P + S ++ L DG
Sbjct: 217 KVAAGGWHSVCLSETGDIYIWG--WNESGQLALP-----TRSGTENKAEREEATELNEDG 269
Query: 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358
L + G P + +P L+ D V + G+ H+AVVT +
Sbjct: 270 LKEELAVADAGA---PAHFIAIQPFPALLDLPLGSDAVMA---SCGSRHTAVVTRTGELY 323
Query: 359 TWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VFCG--SGFTYAISR 409
TWGWG++GQLG ++ P V + F R ++ V CG + + YA+ R
Sbjct: 324 TWGWGKYGQLGHKDSTSLDRPCCV---EYFVERQLEVRAVTCGPWNTYVYAMER 374
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 77/194 (39%), Gaps = 41/194 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWGAG GQLG G L EL P+LL ++ +A GG H + L+ G ++
Sbjct: 181 QVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSET-----GDIY 235
Query: 95 SWGRGSSGQL----------------------------------GHGEMVDALYPKPVTF 120
WG SGQL G A+ P P
Sbjct: 236 IWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALL 295
Query: 121 FDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKN- 179
S G H+ V+ +G L+T G G +GQLGH D S P V FV +
Sbjct: 296 DLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQL 355
Query: 180 -VHQIACGMRHSLV 192
V + CG ++ V
Sbjct: 356 EVRAVTCGPWNTYV 369
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 261 RGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320
R + + C Q L L Q LG HVL+L G+V G HG L +
Sbjct: 144 RAYVTPEPPFC-QPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAEL 202
Query: 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGL 370
P + L G+++ ++AAG HS ++E I WGW E GQL L
Sbjct: 203 EP-----RLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 53/195 (27%)
Query: 56 LSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYP 115
L+P+L V L G HVL L + G+VFSWG G GQLGHG + L P
Sbjct: 157 LAPEL-------RVRQLELGAEHVLLLCA-----AGQVFSWGAGRHGQLGHGTLEAELEP 204
Query: 116 KPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCG------------------------ 151
+ + G R + ++AG HS +S++G ++ G
Sbjct: 205 RLLEALQGLR--MAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEA 262
Query: 152 -----DGTFGQLGHGDYRSHSSPVKVSSF-------VNKNVHQIACGMRHSLVLLKDCLG 199
DG +L D + + + + F + + +CG RH+ V+ +
Sbjct: 263 TELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRT--- 319
Query: 200 NQVYGFGSGKRGQLG 214
++Y +G GK GQLG
Sbjct: 320 GELYTWGWGKYGQLG 334
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 15/199 (7%)
Query: 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187
+ + G H + +G +F+ G G GQLGHG + P + + + ++A G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGV-SKDRIRSVSLPQVTIGLHDIEIVGISANGDR 246
HS+ L + +Y +G + GQL + ++ + + + L++ + A D
Sbjct: 223 WHSVCLSET---GDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADA 279
Query: 247 SAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306
A F + LP A+ G H V+T GE+ G
Sbjct: 280 GAPAH-----------FIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWG 328
Query: 307 HHGMLSDPERVSSTRPLSV 325
+G L + S RP V
Sbjct: 329 KYGQLGHKDSTSLDRPCCV 347
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 336 VKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVN 383
++V Q+ GAEH ++ + +WG G HGQLG G ++ P+++
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 172/413 (41%), Gaps = 61/413 (14%)
Query: 13 KSALINNAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGR-LHDELSPQLLNLSSLSSVSM 71
+ A+ + K K+ + V + G G GQLG G + + P L+ L L V
Sbjct: 14 EDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPL--LQDVVQ 71
Query: 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDA--LYPKPVTFFDGHRYTIT 129
GG H + L+ G+V+S+G G LG V+ + P V + +
Sbjct: 72 AEAGGMHTVCLSQ-----SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL----QEKVV 122
Query: 130 HISAGWNHSGFVSDSGCLFTCG-----DGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184
+SAG +H+ +++ G +F G +G G L + PV+V ++ V ++A
Sbjct: 123 QVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLL--EPMKKSMVPVQVQ--LDAPVVKVA 178
Query: 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG 244
G H ++L D +Y G G++GQLG + + Q L V + + G
Sbjct: 179 SGNDHLVMLTND---GDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRG 235
Query: 245 DR--------------SAALSAEGHLYTWG------RGFNSTSDVNCPQSLPSSLSFSQA 284
R + A+S EGH+Y +G G T PQ+L S + +++
Sbjct: 236 TRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKS 295
Query: 285 ALGWN----HVLVLTGDGEVLMLGGSHHGMLSDPE--RVSSTRPLSVALEKVSNLDGVKV 338
+G++ H + + +G+ LG + +G L E S L L VS+
Sbjct: 296 WVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSS------ 349
Query: 339 IQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNR 391
+A GA V+++ + WG G + QLG G D P V G + +NR
Sbjct: 350 --VACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP-VEMTGKQLENR 399
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 35/233 (15%)
Query: 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWG- 260
V G G GQLG+ + + P + L D+ V A G + LS G +Y++G
Sbjct: 37 VLTLGQGDVGQLGLGESVLERKK-PALVPLLQDV--VQAEAGGMHTVCLSQSGQVYSFGC 93
Query: 261 ---RGFNSTSDVNCPQSLPSSLSFS----QAALGWNHVLVLTGDGEVLMLGG--SHHGM- 310
+ V + +P + Q + G +H LT DG V + G ++G+
Sbjct: 94 NDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVI 153
Query: 311 -LSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLG 369
L +P + S P+ V L+ V+++A+G +H ++T + + T G GE GQLG
Sbjct: 154 GLLEPMK-KSMVPVQVQLD-------APVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLG 205
Query: 370 -----LGNTCDQ------IHPKVVNLGDE-FQNRDTQLEVFCGSGFTYAISRH 410
N + + P+ V L + R + FCG+ FT+AISR
Sbjct: 206 RVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISRE 258
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 152/383 (39%), Gaps = 55/383 (14%)
Query: 10 EKGKSALINNAKPKIEEEEEEQQVV------KVWSWGAGTDGQLG--TGRLHDELSPQLL 61
E+ K AL+ + ++ E V +V+S+G +G LG T E+ P +
Sbjct: 56 ERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKV 115
Query: 62 NLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWG--RGSSGQLGHGE-MVDALYPKPV 118
L V ++ G +H ALT G+VF WG R ++G +G E M ++ P V
Sbjct: 116 ELQE--KVVQVSAGDSHTAALTED-----GRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 168
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDY-------RSHSSPVK 171
+ +++G +H +++ G L+T G G GQLG R +
Sbjct: 169 QL----DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLL 224
Query: 172 VSSFV---------NKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
V V CG + + ++ VYGFG QLG S
Sbjct: 225 VPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISRE---GHVYGFGLSNYHQLGTPG--TGS 279
Query: 223 VSLPQVTIGLHDIEI--VGISANGDRSAALSAEGHLYTWGR------GFNSTSDVNCPQS 274
+PQ + VG S + + +EG Y+ GR G ++ +
Sbjct: 280 CFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPT 339
Query: 275 LPSSLS-FSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333
L S L S A G + ++ DG V G + L + + P+ + +++ N
Sbjct: 340 LISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENR 399
Query: 334 DGVKVIQIAAGAEHSAVVTENRA 356
V+ +++G +H+ ++ +++A
Sbjct: 400 ---VVLTVSSGGQHTVLLVKDQA 419
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 26/250 (10%)
Query: 163 YRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222
Y S P Q+ G H+L+L D G QV+ +G G+ GQLG + +
Sbjct: 143 YVSPRPPFYRPLAPELRARQLELGAEHALLL--DAAG-QVFSWGGGRHGQLG--HGTLEA 197
Query: 223 VSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQS--LPSSLS 280
P++ L + + ++A G S +S G +Y WG +N + + P +
Sbjct: 198 ELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWG--WNESGQLALPTRNLAEDGET 255
Query: 281 FSQAALGWNHVLVLTGDG-EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVI 339
++ A G N DG +V G G P + +P L+ D VKV
Sbjct: 256 VAREATGLNE------DGSQVKRTGRVEDGA---PAPFIAVQPFPALLDLPLGSDAVKV- 305
Query: 340 QIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLE-VF 398
+ G+ H+AVVT + TWGWG++GQLG +T P+ V F ++ Q++ V
Sbjct: 306 --SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEY---FVDKQLQVKAVT 360
Query: 399 CGSGFTYAIS 408
CG TY +
Sbjct: 361 CGPWNTYVYA 370
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 43/196 (21%)
Query: 35 KVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVF 94
+V+SWG G GQLG G L EL P+LL +++ +A GG H + ++ G ++
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSE-----TGDIY 232
Query: 95 SWGRGSSGQLG--------HGEMVD----------------------------ALYPKPV 118
WG SGQL GE V A+ P P
Sbjct: 233 IWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPA 292
Query: 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK 178
+S G H+ V+ +G L+T G G +GQLGH D S P +V FV+K
Sbjct: 293 LLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDK 352
Query: 179 --NVHQIACGMRHSLV 192
V + CG ++ V
Sbjct: 353 QLQVKAVTCGPWNTYV 368
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 52 LHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD 111
+ L+P+L L G H L L + G+VFSWG G GQLGHG +
Sbjct: 150 FYRPLAPEL-------RARQLELGAEHALLLDA-----AGQVFSWGGGRHGQLGHGTLEA 197
Query: 112 ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVK 171
L P+ + G T+ ++AG HS VS++G ++ G GQL + P +
Sbjct: 198 ELEPRLLEALQG--LTMAEVAAGGWHSVCVSETGDIYIWGWNESGQL--------ALPTR 247
Query: 172 VSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG 231
+ + V + A G+ G+QV G R + G I P +
Sbjct: 248 NLAEDGETVAREATGLNED--------GSQVKRTG---RVEDGAPAPFIAVQPFPALLDL 296
Query: 232 LHDIEIVGISANGDRSAALSAEGHLYTWGRG 262
+ V +S +A ++ G LYTWG G
Sbjct: 297 PLGSDAVKVSCGSRHTAVVTRTGELYTWGWG 327
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 49 TGRLHD---------ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRG 99
TGR+ D + P LL+L S ++CG H +T G++++WG G
Sbjct: 273 TGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTR-----TGELYTWGWG 327
Query: 100 SSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVSDSG 145
GQLGH + +P+ V +F + + ++ G WN + + G
Sbjct: 328 KYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKG 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,349,292
Number of Sequences: 539616
Number of extensions: 7344826
Number of successful extensions: 19904
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 18137
Number of HSP's gapped (non-prelim): 517
length of query: 416
length of database: 191,569,459
effective HSP length: 120
effective length of query: 296
effective length of database: 126,815,539
effective search space: 37537399544
effective search space used: 37537399544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)