Query 014875
Match_columns 416
No_of_seqs 312 out of 1975
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 19:23:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kci_A Probable E3 ubiquitin-p 100.0 7.5E-75 2.6E-79 560.5 33.3 369 24-411 10-388 (389)
2 3mvd_K Regulator of chromosome 100.0 2.1E-70 7.3E-75 535.8 40.2 365 23-411 32-419 (423)
3 4d9s_A UVB-resistance protein 100.0 3.9E-70 1.3E-74 530.2 37.8 344 26-386 27-379 (406)
4 1a12_A RCC1, regulator of chro 100.0 1.1E-69 3.6E-74 528.9 38.0 363 25-411 18-410 (413)
5 3of7_A Regulator of chromosome 100.0 1.5E-69 5E-74 536.1 39.0 376 19-411 14-451 (473)
6 4d9s_A UVB-resistance protein 100.0 7.7E-66 2.6E-70 500.0 40.2 324 67-411 16-348 (406)
7 3kci_A Probable E3 ubiquitin-p 100.0 1.9E-61 6.4E-66 466.8 28.5 320 70-410 4-335 (389)
8 1a12_A RCC1, regulator of chro 100.0 2.5E-60 8.7E-65 462.8 35.0 312 71-410 12-355 (413)
9 3of7_A Regulator of chromosome 100.0 5.9E-60 2E-64 467.4 32.9 329 67-411 10-396 (473)
10 3mvd_K Regulator of chromosome 100.0 3.1E-59 1.1E-63 456.8 34.2 317 66-411 23-365 (423)
11 3qhy_B Beta-lactamase inhibito 100.0 2.1E-55 7.1E-60 404.6 30.2 275 34-414 2-276 (282)
12 3qhy_B Beta-lactamase inhibito 100.0 5.8E-49 2E-53 361.6 26.6 240 28-358 37-276 (282)
13 1p22_A F-BOX/WD-repeat protein 96.9 0.29 1E-05 46.4 27.8 241 67-364 174-414 (435)
14 4gbf_A Phikz131; 7-bladed beta 96.8 0.0033 1.1E-07 54.1 7.6 70 279-366 309-378 (400)
15 2ovr_B FBW7, F-BOX/WD repeat p 96.4 0.7 2.4E-05 43.8 27.9 230 67-364 160-391 (445)
16 1p22_A F-BOX/WD-repeat protein 96.4 0.72 2.5E-05 43.7 30.5 230 68-363 135-364 (435)
17 2zwa_A Leucine carboxyl methyl 95.5 2.5 8.4E-05 43.1 22.9 63 135-207 441-508 (695)
18 4gbf_A Phikz131; 7-bladed beta 95.4 0.021 7.1E-07 49.2 5.4 71 178-266 309-379 (400)
19 2ovr_B FBW7, F-BOX/WD repeat p 95.3 2 6.8E-05 40.6 30.3 226 69-364 122-348 (445)
20 3jrp_A Fusion protein of prote 95.2 1.8 6.1E-05 39.4 26.6 245 67-364 12-287 (379)
21 3mmy_A MRNA export factor; mRN 95.2 1.7 5.9E-05 39.2 23.1 194 66-306 39-246 (368)
22 3jro_A Fusion protein of prote 94.4 5.2 0.00018 41.0 24.1 198 68-307 11-238 (753)
23 1gxr_A ESG1, transducin-like e 92.8 4.8 0.00016 35.6 31.0 189 66-306 97-295 (337)
24 1k3i_A Galactose oxidase precu 92.5 9.7 0.00033 38.2 23.7 66 245-310 458-534 (656)
25 3k26_A Polycomb protein EED; W 92.2 6.2 0.00021 35.4 22.2 251 67-362 70-364 (366)
26 3i2n_A WD repeat-containing pr 91.9 6.7 0.00023 35.1 23.9 196 66-306 65-290 (357)
27 2zwa_A Leucine carboxyl methyl 90.9 15 0.00051 37.3 20.3 61 243-306 490-559 (695)
28 3mmy_A MRNA export factor; mRN 90.1 10 0.00034 33.9 21.4 159 115-306 29-198 (368)
29 1k3i_A Galactose oxidase precu 89.9 17 0.00059 36.4 28.0 73 288-367 457-534 (656)
30 4aez_A CDC20, WD repeat-contai 89.9 12 0.00041 34.5 29.6 190 65-305 133-334 (401)
31 3k26_A Polycomb protein EED; W 89.7 11 0.00037 33.7 22.0 215 66-304 115-363 (366)
32 2vpj_A Kelch-like protein 12; 86.9 15 0.00053 32.2 14.9 17 345-362 245-261 (301)
33 3odt_A Protein DOA1; ubiquitin 86.4 16 0.00053 31.8 27.0 186 126-364 105-296 (313)
34 3jrp_A Fusion protein of prote 86.2 18 0.00062 32.3 21.2 196 126-364 12-240 (379)
35 2aq5_A Coronin-1A; WD40 repeat 84.2 25 0.00086 32.2 24.0 159 71-261 39-205 (402)
36 4aez_A CDC20, WD repeat-contai 83.8 26 0.0009 32.1 27.9 188 69-306 96-292 (401)
37 2aq5_A Coronin-1A; WD40 repeat 83.5 27 0.00091 32.0 23.5 115 67-207 82-205 (402)
38 3v7d_B Cell division control p 83.0 30 0.001 32.3 32.7 240 67-364 163-421 (464)
39 1pgu_A Actin interacting prote 82.7 36 0.0012 32.9 23.9 148 126-306 161-327 (615)
40 3ei3_B DNA damage-binding prot 82.3 28 0.00097 31.4 22.1 194 67-307 74-282 (383)
41 3ii7_A Kelch-like protein 7; p 81.4 27 0.00093 30.6 14.9 18 288-306 192-209 (306)
42 4g56_B MGC81050 protein; prote 80.5 33 0.0011 31.0 24.9 188 67-306 140-342 (357)
43 1sq9_A Antiviral protein SKI8; 80.1 34 0.0012 30.9 23.0 170 119-306 10-215 (397)
44 3jro_A Fusion protein of prote 79.8 56 0.0019 33.2 21.1 196 126-364 10-238 (753)
45 3sfz_A APAF-1, apoptotic pepti 79.2 74 0.0025 34.2 22.1 190 127-362 1046-1247(1249)
46 1yfq_A Cell cycle arrest prote 79.1 33 0.0011 30.1 27.7 203 67-307 12-225 (342)
47 3i2n_A WD repeat-containing pr 78.7 34 0.0012 30.2 22.3 155 126-306 19-198 (357)
48 1xip_A Nucleoporin NUP159; bet 78.5 17 0.00059 33.8 11.1 98 180-303 90-187 (388)
49 4ery_A WD repeat-containing pr 78.4 34 0.0011 29.8 26.8 227 67-362 66-310 (312)
50 1zgk_A Kelch-like ECH-associat 76.4 40 0.0014 29.7 13.0 17 345-362 207-223 (308)
51 1r5m_A SIR4-interacting protei 73.6 52 0.0018 29.7 26.5 237 68-364 110-361 (425)
52 3ii7_A Kelch-like protein 7; p 72.9 48 0.0016 29.0 17.2 18 288-306 239-256 (306)
53 3uc1_A DNA gyrase subunit A; D 72.2 56 0.0019 29.5 17.3 163 184-361 50-225 (327)
54 1sq9_A Antiviral protein SKI8; 71.2 59 0.002 29.2 26.3 204 67-306 17-266 (397)
55 3mkq_A Coatomer beta'-subunit; 70.8 92 0.0032 31.4 24.5 190 67-306 56-258 (814)
56 1gxr_A ESG1, transducin-like e 70.8 52 0.0018 28.5 29.2 197 73-306 8-213 (337)
57 1suu_A DNA gyrase subunit A; t 70.2 60 0.0021 29.0 20.5 216 135-370 8-237 (312)
58 3vl1_A 26S proteasome regulato 69.0 68 0.0023 29.1 26.3 69 235-307 291-365 (420)
59 1pgu_A Actin interacting prote 67.5 90 0.0031 30.0 26.7 110 236-365 448-573 (615)
60 3odt_A Protein DOA1; ubiquitin 66.3 62 0.0021 27.7 29.6 228 67-364 19-255 (313)
61 3v7d_B Cell division control p 66.2 83 0.0028 29.1 32.0 242 69-365 125-382 (464)
62 1r5m_A SIR4-interacting protei 65.3 78 0.0027 28.5 23.1 138 136-306 218-360 (425)
63 1zgk_A Kelch-like ECH-associat 64.3 74 0.0025 27.8 16.4 17 345-362 254-270 (308)
64 2xn4_A Kelch-like protein 2; s 64.2 72 0.0025 27.7 14.3 16 136-152 101-116 (302)
65 4gqb_B Methylosome protein 50; 63.8 82 0.0028 28.2 25.7 188 67-305 128-329 (344)
66 1k8k_C P40, ARP2/3 complex 41 63.6 79 0.0027 27.9 27.3 242 67-364 9-274 (372)
67 3no0_A DNA gyrase subunit A; D 61.6 83 0.0028 27.5 20.2 213 67-313 24-252 (276)
68 1yfq_A Cell cycle arrest prote 61.1 83 0.0028 27.4 21.9 204 67-305 57-280 (342)
69 3zwl_B Eukaryotic translation 58.6 94 0.0032 27.2 25.2 197 67-305 33-247 (369)
70 2xyi_A Probable histone-bindin 57.3 1.2E+02 0.004 27.9 25.4 203 68-306 183-409 (430)
71 4gga_A P55CDC, cell division c 57.2 1.2E+02 0.004 27.8 27.3 65 68-151 149-215 (420)
72 2pm9_A Protein WEB1, protein t 55.6 1.2E+02 0.004 27.3 22.2 245 66-366 67-339 (416)
73 4asc_A Kelch repeat and BTB do 54.0 1.1E+02 0.0038 26.7 16.5 18 187-208 140-157 (315)
74 4a11_B DNA excision repair pro 53.8 1.2E+02 0.0041 27.0 30.6 202 65-307 42-276 (408)
75 4asc_A Kelch repeat and BTB do 52.5 1.2E+02 0.0041 26.5 17.4 18 244-262 140-157 (315)
76 3mkq_A Coatomer beta'-subunit; 51.6 2E+02 0.0068 28.8 27.8 230 67-364 14-259 (814)
77 3sfz_A APAF-1, apoptotic pepti 48.7 2.8E+02 0.0095 29.6 22.6 188 136-364 1016-1207(1249)
78 3zwl_B Eukaryotic translation 48.6 1.4E+02 0.0047 26.1 23.8 151 126-306 33-205 (369)
79 1xip_A Nucleoporin NUP159; bet 48.5 1.7E+02 0.0057 27.0 13.0 98 128-259 90-187 (388)
80 3uc1_A DNA gyrase subunit A; D 48.3 1.5E+02 0.0052 26.5 20.7 218 72-313 49-285 (327)
81 4gga_A P55CDC, cell division c 48.0 1.6E+02 0.0056 26.8 28.8 189 72-305 111-308 (420)
82 4gqb_B Methylosome protein 50; 47.7 1.5E+02 0.0052 26.3 30.3 233 67-363 83-330 (344)
83 3l6v_A GYRA, DNA gyrase subuni 45.2 1.8E+02 0.0063 26.6 17.2 160 181-355 51-256 (370)
84 3no2_A Uncharacterized protein 44.6 1.5E+02 0.0052 25.4 22.9 26 236-261 177-204 (276)
85 3vl1_A 26S proteasome regulato 43.2 1.8E+02 0.0063 26.0 28.7 99 246-364 261-365 (420)
86 4g56_B MGC81050 protein; prote 43.0 1.8E+02 0.0062 25.9 29.4 190 126-366 140-345 (357)
87 1vyh_C Platelet-activating fac 42.5 2E+02 0.0068 26.2 26.0 228 67-363 109-368 (410)
88 1wp5_A Topoisomerase IV; broke 41.8 1.9E+02 0.0065 25.8 17.1 160 181-355 44-216 (323)
89 4ery_A WD repeat-containing pr 39.4 1.8E+02 0.0062 24.9 23.8 188 67-306 24-222 (312)
90 2pm9_A Protein WEB1, protein t 39.3 2.1E+02 0.0071 25.5 17.7 111 126-264 215-338 (416)
91 1got_B GT-beta; complex (GTP-b 39.1 2E+02 0.0068 25.2 26.9 136 138-305 157-299 (340)
92 3dwl_C Actin-related protein 2 39.1 2E+02 0.0069 25.3 20.1 113 178-306 56-176 (377)
93 1zi0_A DNA gyrase subunit A; b 38.9 2E+02 0.007 25.3 18.2 162 181-357 47-219 (307)
94 1q7f_A NHL, brain tumor CG1071 35.9 2E+02 0.0067 24.2 12.6 14 138-151 211-224 (286)
95 3no2_A Uncharacterized protein 34.8 2.2E+02 0.0074 24.4 25.0 22 347-369 245-266 (276)
96 1q7f_A NHL, brain tumor CG1071 34.7 2.1E+02 0.007 24.1 23.4 16 290-305 210-225 (286)
97 1k8k_C P40, ARP2/3 complex 41 34.3 2.3E+02 0.008 24.6 24.3 71 236-306 98-172 (372)
98 3iz6_a 40S ribosomal protein R 33.5 2.6E+02 0.0089 24.9 20.1 162 126-305 206-373 (380)
99 3frx_A Guanine nucleotide-bind 33.2 2.4E+02 0.0082 24.4 22.6 244 58-360 57-313 (319)
100 2woz_A Kelch repeat and BTB do 32.0 1.7E+02 0.0059 25.4 8.6 16 136-152 151-166 (318)
101 2vpj_A Kelch-like protein 12; 31.4 2.5E+02 0.0084 24.0 18.8 17 289-306 246-262 (301)
102 4aow_A Guanine nucleotide-bind 31.2 2.5E+02 0.0085 24.0 25.6 65 236-305 217-284 (340)
103 2uvk_A YJHT; unknown function, 29.8 1.4E+02 0.0047 26.6 7.6 17 187-207 110-126 (357)
104 2xzm_R RACK1; ribosome, transl 29.6 2.8E+02 0.0097 24.2 23.9 207 117-363 13-243 (343)
105 4a11_B DNA excision repair pro 26.7 3.3E+02 0.011 23.9 30.5 251 67-368 100-369 (408)
106 3gre_A Serine/threonine-protei 26.7 3.5E+02 0.012 24.3 20.6 119 66-207 111-243 (437)
107 3f3f_A Nucleoporin SEH1; struc 26.6 2.9E+02 0.01 23.4 28.3 123 67-208 12-142 (351)
108 3dwl_C Actin-related protein 2 26.2 3.3E+02 0.011 23.8 25.0 139 90-262 32-176 (377)
109 3no0_A DNA gyrase subunit A; D 25.9 3.2E+02 0.011 23.6 21.3 200 135-369 35-251 (276)
110 1suu_A DNA gyrase subunit A; t 23.9 3.7E+02 0.013 23.6 21.4 218 67-308 47-284 (312)
111 3vgz_A Uncharacterized protein 22.7 3.7E+02 0.013 23.1 26.6 17 347-363 317-334 (353)
112 4ggc_A P55CDC, cell division c 20.9 3.7E+02 0.013 22.5 27.1 145 75-262 34-180 (318)
113 3q7m_A Lipoprotein YFGL, BAMB; 20.1 4.5E+02 0.015 23.1 11.7 57 244-303 318-374 (376)
No 1
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-75 Score=560.47 Aligned_cols=369 Identities=25% Similarity=0.378 Sum_probs=325.0
Q ss_pred chhhhhceeecEEEEEeCCCCCccccCCCCCCcCCeeeecCCCCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCc
Q 014875 24 IEEEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103 (416)
Q Consensus 24 ~~~~~~~~~~g~v~~wG~n~~GqLG~g~~~~~~~p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gq 103 (416)
.......+.+|+||+||+|.+||||.++..+...|+++..+...+|++|+||..|+++|++ +|+||+||.|.+||
T Consensus 10 ~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~-----~G~v~~wG~n~~Gq 84 (389)
T 3kci_A 10 GRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA-----DGKLYATGYGAGGR 84 (389)
T ss_dssp -----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEETTEEEEEET-----TSCEEEEECCGGGT
T ss_pred cccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeCCCeEEEEcC-----CCcEEEEECCCCCC
Confidence 3445778899999999999999999998888888999887777799999999999999999 99999999999999
Q ss_pred cCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEE
Q 014875 104 LGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQI 183 (416)
Q Consensus 104 lG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i 183 (416)
||.+.......|+++..+.....++++|+||.+|+++|+++|+||+||.|.+||||.++......|.++..+.+.+|++|
T Consensus 85 LG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~v 164 (389)
T 3kci_A 85 LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDV 164 (389)
T ss_dssp TSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEE
T ss_pred CCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEE
Confidence 99999888999999998887556778999999999999999999999999999999999888889999999888899999
Q ss_pred EeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC--CeEEEEeCCCcEEEeeC
Q 014875 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG--DRSAALSAEGHLYTWGR 261 (416)
Q Consensus 184 ~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~--~~~~~lt~~G~vy~wG~ 261 (416)
+||.+|+++|++ +|+||+||.|.+||||.+. ......|.++..+...+|++|+||. .|+++|+++|+||+||.
T Consensus 165 a~G~~hs~alt~---~G~v~~wG~n~~GqLG~~~--~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 165 AAGGAHSACVTA---AGDLYTWGKGRYGRLGHSD--SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp EECSSEEEEEET---TSCEEEEECCGGGTTCSSS--CCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEEC
T ss_pred EeCcCeEEEEeC---CCeEEEeCCCCCCCcCCCC--CcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeC
Confidence 999999999999 9999999999999999984 3456778999888888999999985 89999999999999999
Q ss_pred CCCCCCCC------CCceecC--CCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccC
Q 014875 262 GFNSTSDV------NCPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNL 333 (416)
Q Consensus 262 ~~~~~~~~------~~p~~~~--~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~ 333 (416)
|.++|++. ..|.+++ ...+|++|+||..|+++|+++|+||+||.|.+||||.+.... ...|.+++.+
T Consensus 240 n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~-----~~~P~~v~~l 314 (389)
T 3kci_A 240 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH-----VRRPRQVQGL 314 (389)
T ss_dssp CGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCC-----EEEEEECGGG
T ss_pred CCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCcc-----ccCCeEeccC
Confidence 99999885 3455553 355799999999999999999999999999999999987543 4457778888
Q ss_pred CCCcEEEEecCCCeeEEEECCCCEEEEECCCCCCccCCCCCCccCceEEecCCcccCCCceEEEeecCCeEEEEccCC
Q 014875 334 DGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHC 411 (416)
Q Consensus 334 ~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~~~~~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~~ 411 (416)
.+.+|++|+||.+|+++++++|+||+||+|.+||||.|+..+...|++|+.... .+|.+|+||.+||++|+++.
T Consensus 315 ~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~----~~v~~va~G~~ht~al~~~~ 388 (389)
T 3kci_A 315 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG----KKVNRVACGSAHTLAWSTSK 388 (389)
T ss_dssp TTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTT----SCCCEEEEETTEEEEECC--
T ss_pred CCCCEEEEEeccCeEEEECCCCCEEEeeCCCCCcCCCCCCCCccCcEEecccCC----CCEEEEEecCCcEEEEecCC
Confidence 888999999999999999999999999999999999999999999999975532 37999999999999999864
No 2
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=2.1e-70 Score=535.82 Aligned_cols=365 Identities=23% Similarity=0.315 Sum_probs=312.7
Q ss_pred CchhhhhceeecEEEEEeCCCCCccccCCC-CCCcCCeeeecCCCCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCC
Q 014875 23 KIEEEEEEQQVVKVWSWGAGTDGQLGTGRL-HDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSS 101 (416)
Q Consensus 23 ~~~~~~~~~~~g~v~~wG~n~~GqLG~g~~-~~~~~p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~ 101 (416)
........+++|+||+||.|.+||||+++. .+...|.++.. ...|++|+||..|+++|++ +|+||+||.|.+
T Consensus 32 g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~--l~~v~~va~G~~h~~~l~~-----~G~v~~wG~n~~ 104 (423)
T 3mvd_K 32 HLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAG--IPDAVDISAGGMHNLVLTK-----SGDIYSFGCNDE 104 (423)
T ss_dssp CCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCS--CSSEEEEEECSSEEEEEET-----TSCEEEEECCSS
T ss_pred CCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccC--CCCceEEeeCCCeEEEEeC-----CCeEEEeECCCC
Confidence 344447788999999999999999999965 33445665543 4679999999999999999 999999999999
Q ss_pred CccCCCCCCC--eeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEEEcC--CCCccccCCCCCCcccceEeeecCC
Q 014875 102 GQLGHGEMVD--ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSHSSPVKVSSFVN 177 (416)
Q Consensus 102 gqlG~~~~~~--~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~--n~~gqlG~~~~~~~~~p~~v~~~~~ 177 (416)
||||.+.... ...|.++.... +|++|+||.+|+++|+++|+||+||. |.+||||.+.......|.++ +..
T Consensus 105 GqLG~~~~~~~~~~~P~~v~~~~----~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~--~~~ 178 (423)
T 3mvd_K 105 GALGRDTSEDGSESKPDLIDLPG----KALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDL--MEG 178 (423)
T ss_dssp STTCSCCCSTTSSSSCEECCCSS----CEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEES--STT
T ss_pred cCCCCCCcCCccccCCeEEcCCC----CEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEe--cCC
Confidence 9999998764 67788887543 59999999999999999999999999 99999999887776666655 456
Q ss_pred CceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCC---------cceeecCeEecccCCCCEEEEecCCCeEE
Q 014875 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR---------IRSVSLPQVTIGLHDIEIVGISANGDRSA 248 (416)
Q Consensus 178 ~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~---------~~~~~~p~~~~~~~~~~i~~i~~g~~~~~ 248 (416)
.+|++|+||.+|+++|++ +|+||+||.|.+||||.+... ......|..+......+|++|+||..|++
T Consensus 179 ~~i~~va~G~~hs~alt~---~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~ 255 (423)
T 3mvd_K 179 TVCCSIASGADHLVILTT---AGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTF 255 (423)
T ss_dssp CCEEEEEECSSEEEEEET---TSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEE
T ss_pred CcEEEEecCCCeEEEEec---CCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEE
Confidence 789999999999999999 999999999999999997532 23445788888777778999999999999
Q ss_pred EE-eCCCcEEEeeCCCCCCCCCC--------CceecCCCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcc
Q 014875 249 AL-SAEGHLYTWGRGFNSTSDVN--------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSS 319 (416)
Q Consensus 249 ~l-t~~G~vy~wG~~~~~~~~~~--------~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~ 319 (416)
++ +++|+||+||.|.++|++.. .|..+. ..+|++|+||..|+++|+++|+||+||.|.+||||.++....
T Consensus 256 ~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~-~~~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~ 334 (423)
T 3mvd_K 256 MRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTE-LKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV 334 (423)
T ss_dssp EEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEEC-CCSEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSC
T ss_pred EEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcC-CCCeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCcccc
Confidence 99 69999999999999999862 344444 568999999999999999999999999999999999875431
Q ss_pred cCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCCCCCccCCCCCCccCceEEecCCcccCCCceEEEee
Q 014875 320 TRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFC 399 (416)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~~~~~p~~v~~~~~~~~~~~v~~v~~ 399 (416)
...|.+++.+.. +|++|+||.+|+++|+++|+||+||+|.+||||.|+..+...|++|..... ...+|.+|+|
T Consensus 335 ----~~~p~~v~~l~~-~v~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~--~~~~v~~va~ 407 (423)
T 3mvd_K 335 ----VEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNT--QGKHMLLASG 407 (423)
T ss_dssp ----EEEEEECTTCCS-CEEEEEEETTEEEEEETTSCEEEEECCTTSCSSSSSSCCEEEEEECCSTTT--TTCCEEEEEE
T ss_pred ----ccCceEeccCCC-CEEEEEcCCCeEEEEcCCCCEEEECCCCCCCCCCCCCCCcccCeEEeCccc--CCCEEEEEEE
Confidence 335666777666 899999999999999999999999999999999999999999999985321 2247999999
Q ss_pred cCCeEEEEccCC
Q 014875 400 GSGFTYAISRHC 411 (416)
Q Consensus 400 G~~~t~~i~~~~ 411 (416)
|.+||++|+++.
T Consensus 408 G~~ht~~l~~~~ 419 (423)
T 3mvd_K 408 GGQHAIFLVKAD 419 (423)
T ss_dssp CSSEEEEEEECC
T ss_pred CCCcEEEEEccc
Confidence 999999999876
No 3
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=3.9e-70 Score=530.21 Aligned_cols=344 Identities=30% Similarity=0.520 Sum_probs=311.2
Q ss_pred hhhhceeecEEEEEeCCCCCccccCCCCCCcCCeeeecCCCCCeEEEEeCCcceEEeeCCCcccCC-eEEEEecCCCCcc
Q 014875 26 EEEEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGG-KVFSWGRGSSGQL 104 (416)
Q Consensus 26 ~~~~~~~~g~v~~wG~n~~GqLG~g~~~~~~~p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g-~vy~wG~n~~gql 104 (416)
-....+++++||+||.|.+||||.++..+...|+++..+...+|++|+||..|+++|++ ++ +||+||.|.+|||
T Consensus 27 hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~-----~gg~v~~wG~n~~GqL 101 (406)
T 4d9s_A 27 HSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQ-----SGMEVYSWGWGDFGRL 101 (406)
T ss_dssp EEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEET-----TTTEEEEEECCGGGTT
T ss_pred eEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEEC-----CCCEEEEEcCCCCcCC
Confidence 34667889999999999999999999988888988887777899999999999999998 75 9999999999999
Q ss_pred CCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEE
Q 014875 105 GHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA 184 (416)
Q Consensus 105 G~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~ 184 (416)
|.+.......|.++..+.. .+|++|+||..|+++|+++|+||+||.|.+||||.++......|.++..+.+.+|++|+
T Consensus 102 G~g~~~~~~~p~~v~~l~~--~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va 179 (406)
T 4d9s_A 102 GHGNSSDLFTPLPIKALHG--IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVA 179 (406)
T ss_dssp CSSSCCCEEEEEECGGGTT--CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEE
T ss_pred CCCCCCccccceEecccCC--CCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEe
Confidence 9999989999999998877 78999999999999999999999999999999999999888999999988888999999
Q ss_pred eCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCC
Q 014875 185 CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFN 264 (416)
Q Consensus 185 ~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~ 264 (416)
||.+|+++|++ +|+||+||.|.+||||.+. ......|.++..+...+|++|+||..|+++|+++|+||+||.|.+
T Consensus 180 ~G~~hs~alt~---~G~v~~wG~n~~GqlG~g~--~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~ 254 (406)
T 4d9s_A 180 AGAEHTAAVTE---DGDLYGWGWGRYGNLGLGD--RTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 254 (406)
T ss_dssp ECSSEEEEEET---TSCEEEEECCTTSTTCSSS--SCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTT
T ss_pred cCCCeEEEEeC---CCCEEEeeCCCCCCCCCCC--CCCcCccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCC
Confidence 99999999999 9999999999999999984 344567888888888899999999999999999999999999999
Q ss_pred CCCCCC------CceecC--CCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCC
Q 014875 265 STSDVN------CPQSLP--SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGV 336 (416)
Q Consensus 265 ~~~~~~------~p~~~~--~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~ 336 (416)
+|++.. .|.++. ...+|++|+||..|+++|+++|+||+||.|.+||||.++... ...|.++..+...
T Consensus 255 GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~-----~~~p~~v~~~~~~ 329 (406)
T 4d9s_A 255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD-----QCSPVQVRFPDDQ 329 (406)
T ss_dssp STTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSC-----EEEEEEECCGGGC
T ss_pred CCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCC-----CccCEEEeccCCC
Confidence 999753 344443 456799999999999999999999999999999999987654 3345566655666
Q ss_pred cEEEEecCCCeeEEEECCCCEEEEECCCCCCccCCCCCCccCceEEecCC
Q 014875 337 KVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGD 386 (416)
Q Consensus 337 ~v~~i~~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~~~~~p~~v~~~~ 386 (416)
+|++|+||.+|++||+++|+||+||+|.+||||+|+..++..|++|+...
T Consensus 330 ~v~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~ 379 (406)
T 4d9s_A 330 KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379 (406)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGC
T ss_pred cEEEEEeCCCeEEEEeCCCCEEEecCCCCCccCCCCCCCCcCCEEeeeec
Confidence 89999999999999999999999999999999999999999999998543
No 4
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=1.1e-69 Score=528.94 Aligned_cols=363 Identities=25% Similarity=0.392 Sum_probs=305.4
Q ss_pred hhhhhceeecEEEEEeCCCCCccccCCCCC-CcCCeeeecCCCCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCc
Q 014875 25 EEEEEEQQVVKVWSWGAGTDGQLGTGRLHD-ELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQ 103 (416)
Q Consensus 25 ~~~~~~~~~g~v~~wG~n~~GqLG~g~~~~-~~~p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gq 103 (416)
.-....+++|+||+||.|.+||||+++... ...|+++..+ .+|++|+||..|+++|++ +|+||+||.|.+||
T Consensus 18 ~h~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~~--~~i~~va~G~~hs~~l~~-----~G~v~~wG~n~~Gq 90 (413)
T 1a12_A 18 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIP--EDVVQAEAGGMHTVCLSK-----SGQVYSFGCNDEGA 90 (413)
T ss_dssp CCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCS--SCEEEEEECSSEEEEEET-----TSCEEEEECCTTST
T ss_pred ccceeecCCCcEEEEECCCCCcCCCCCCccccccceEccCC--CCeEEEEeCCCeEEEEcC-----CCCEEEEECCCCCC
Confidence 344677889999999999999999998654 4567777644 799999999999999999 99999999999999
Q ss_pred cCCCCCC--CeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEEEcC--CCCccccCCCCCCc-ccceEeeecCCC
Q 014875 104 LGHGEMV--DALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGD--GTFGQLGHGDYRSH-SSPVKVSSFVNK 178 (416)
Q Consensus 104 lG~~~~~--~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~--n~~gqlG~~~~~~~-~~p~~v~~~~~~ 178 (416)
||.+... ....|+++.+. .+|++|+||.+|+++|+++|+||+||. |.+||||.++.... ..|.++ +...
T Consensus 91 LG~~~~~~~~~~~P~~v~l~----~~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v--~~~~ 164 (413)
T 1a12_A 91 LGRDTSVEGSEMVPGKVELQ----EKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDV 164 (413)
T ss_dssp TCSCCCSTTGGGSCEECCCC----SCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSS
T ss_pred CCCCCCCCccccCCeEecCC----CcEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe--cCCC
Confidence 9998763 46678888542 369999999999999999999999999 99999999865433 357777 3456
Q ss_pred ceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCc---------ceeecCeEeccc-----CCCCEEEEecCC
Q 014875 179 NVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI---------RSVSLPQVTIGL-----HDIEIVGISANG 244 (416)
Q Consensus 179 ~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~---------~~~~~p~~~~~~-----~~~~i~~i~~g~ 244 (416)
+|++|+||.+|+++|++ +|+||+||.|.+||||.+.... .....|..+... ...+|++|+||.
T Consensus 165 ~i~~ia~G~~hs~alt~---~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~ 241 (413)
T 1a12_A 165 PVVKVASGNDHLVMLTA---DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGA 241 (413)
T ss_dssp CEEEEEECSSEEEEEET---TSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEET
T ss_pred CEEEEEecCceEEEEcC---CCCEEEeeCCCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeCC
Confidence 89999999999999999 9999999999999999874221 123466555442 346899999999
Q ss_pred CeEEEEeCCCcEEEeeCCCCCCCCCC------CceecCC--C--CCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCC
Q 014875 245 DRSAALSAEGHLYTWGRGFNSTSDVN------CPQSLPS--S--LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDP 314 (416)
Q Consensus 245 ~~~~~lt~~G~vy~wG~~~~~~~~~~------~p~~~~~--~--~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~ 314 (416)
.|+++|+++|+||+||.|.++|++.. .|..+.. . .+|++|+||..|+++|+++|+||+||.|.+||||.+
T Consensus 242 ~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g 321 (413)
T 1a12_A 242 YFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 321 (413)
T ss_dssp TEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSC
T ss_pred CEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCC
Confidence 99999999999999999999999853 4555543 2 469999999999999999999999999999999998
Q ss_pred CCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCCCCCccCCCCCCccCceEEecCCcccCCCce
Q 014875 315 ERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQ 394 (416)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~~~~~p~~v~~~~~~~~~~~v 394 (416)
.... ....|.+++.+. +|++|+||.+|+++++++|+||+||.|.+||||.++..+...|++|+... + ...+|
T Consensus 322 ~~~~----~~~~P~~v~~l~--~v~~v~~G~~hs~alt~~G~v~~wG~n~~gqLG~g~~~~~~~P~~v~~~~-~-~~~~v 393 (413)
T 1a12_A 322 EGAE----EKSIPTLISRLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQ-L-ENRVV 393 (413)
T ss_dssp TTCC----CEEEEEECCSSS--SEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTT-T-TTEEE
T ss_pred CCCc----cccCCEEecccC--ceeEEEECcceEEEEeCCCCEEEecCCCCCCCCCCCCCCcccCeEccccc-c-CCCeE
Confidence 4322 244566676665 89999999999999999999999999999999999998888999988531 1 22379
Q ss_pred EEEeecCCeEEEEccCC
Q 014875 395 LEVFCGSGFTYAISRHC 411 (416)
Q Consensus 395 ~~v~~G~~~t~~i~~~~ 411 (416)
.+|+||.+||++|+++.
T Consensus 394 ~~v~~G~~ht~~l~~~g 410 (413)
T 1a12_A 394 LSVSSGGQHTVLLVKDK 410 (413)
T ss_dssp EEEEECSSEEEEEEEEC
T ss_pred EEEeeCCCcEEEEEecC
Confidence 99999999999998764
No 5
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-69 Score=536.09 Aligned_cols=376 Identities=26% Similarity=0.381 Sum_probs=309.4
Q ss_pred cCCCCchhhhhceeecEEEEEeCCCCCccccCCCC---CCcCCeeeecC--CCCCeEEEEeCCcceEEeeCCCcccCCeE
Q 014875 19 NAKPKIEEEEEEQQVVKVWSWGAGTDGQLGTGRLH---DELSPQLLNLS--SLSSVSMLACGGAHVLALTSPSSVIGGKV 93 (416)
Q Consensus 19 ~~~~~~~~~~~~~~~g~v~~wG~n~~GqLG~g~~~---~~~~p~~i~~~--~~~~i~~ia~G~~h~~~lt~~~~~~~g~v 93 (416)
+...+-+-....+++++||+||.|.+||||+|+.. +...|++++.+ ...+|++|+||..|+++|++ +|+|
T Consensus 14 ~~~~~~~h~~~~~~~g~v~~wG~n~~GqLG~G~~~~~~~~~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~-----~G~v 88 (473)
T 3of7_A 14 NAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDE-----ESNV 88 (473)
T ss_dssp CCGGGGHHHHCCSSCCEEEEEEECTTSTTCSCSCGGGGEEEEEEECTTSCTTTTCEEEEEECSSEEEEEET-----TCCE
T ss_pred hhcccccccccCCCCccEEEEcCCCCCccCCCCCcccccccCcccccccccCCCCEEEEEeCCCeEEEEec-----CCeE
Confidence 34444555677888999999999999999999853 34566666655 44699999999999999999 9999
Q ss_pred EEEecCCCCccCCCCCCC-----------------------eeceeEeee--c----CCCcccEEEEeecCceEEEEEeC
Q 014875 94 FSWGRGSSGQLGHGEMVD-----------------------ALYPKPVTF--F----DGHRYTITHISAGWNHSGFVSDS 144 (416)
Q Consensus 94 y~wG~n~~gqlG~~~~~~-----------------------~~~p~~v~~--~----~~~~~~i~~i~~G~~~~~~lt~~ 144 (416)
|+||.|.+||||.+.... ...|+++.. + .. .+|++|+||..|+++|+++
T Consensus 89 ~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~~--~~i~~va~G~~hs~alt~~ 166 (473)
T 3of7_A 89 WSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEG--HKVVQLAATDNMSCALFSN 166 (473)
T ss_dssp EEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHHTT--CCEEEEEECSSEEEEEETT
T ss_pred EEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcccCC--CcEEEEEccCCEEEEEeCC
Confidence 999999999999987654 457888774 3 23 6799999999999999999
Q ss_pred CCEEEEcC--CCCccccCCCC--CCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCc
Q 014875 145 GCLFTCGD--GTFGQLGHGDY--RSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220 (416)
Q Consensus 145 G~v~~~G~--n~~gqlG~~~~--~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~ 220 (416)
|+||+||. +.+||||.+.. .....|.++..+.+.+|++|+||.+|+++|++ +|+||+||.|.+||||.+....
T Consensus 167 G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~---~G~v~~wG~n~~GqLG~~~~~~ 243 (473)
T 3of7_A 167 GEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDE---EGMVFAWGNGQQNQLGRKVMER 243 (473)
T ss_dssp SCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEET---TSCEEEEECCTTSTTSSCCCGG
T ss_pred CeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeC---CCeEEEEeCCCCCCCCCCcccc
Confidence 99999998 68899998543 35678999988888889999999999999999 9999999999999999984322
Q ss_pred c--eeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCC----------CceecC--CCCCeeEEEe
Q 014875 221 R--SVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN----------CPQSLP--SSLSFSQAAL 286 (416)
Q Consensus 221 ~--~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~----------~p~~~~--~~~~i~~i~~ 286 (416)
. ....|..+.. .+|++|+||.+|+++|+++|+||+||.|.++|++.. .|..+. ...+|++|+|
T Consensus 244 ~~~~~~~p~~~~~---~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~~~~~~~i~~ia~ 320 (473)
T 3of7_A 244 FRLKTLDPRPFGL---RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAA 320 (473)
T ss_dssp GTTTTCSCEECSC---CSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECCCCTTCCEEEEEE
T ss_pred ccccccCceecCC---cceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccccccccCCccEEEEEe
Confidence 1 2345655532 479999999999999999999999999999998843 355554 3468999999
Q ss_pred cCceEEEEecCCCEEEeeCCCCCCCCCCCCCccc---------CccccceeeeccCCCCcEEEEecCCCeeEEEECCCCE
Q 014875 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSST---------RPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAI 357 (416)
Q Consensus 287 g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~v 357 (416)
|..|+++|+++|+||+||.|.+||||.+...... ......|.+++.+. +|++|+||.+|++||+++|+|
T Consensus 321 G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~--~v~~Ia~G~~hs~al~~~G~v 398 (473)
T 3of7_A 321 GEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP--KFKSVAAGSHHSVAVAQNGIA 398 (473)
T ss_dssp CSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCSSC--CEEEEEECSSEEEEEETTSCE
T ss_pred CCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCCCC--ceEEEEeCCCeEEEEeCCCcE
Confidence 9999999999999999999999999987642110 01223445554443 799999999999999999999
Q ss_pred EEEECCCCCCccCCC-CCCccCceEEecCCcccCCCceEEEeecCCeEEEEccCC
Q 014875 358 MTWGWGEHGQLGLGN-TCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHC 411 (416)
Q Consensus 358 y~wG~n~~gqLG~g~-~~~~~~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~~ 411 (416)
|+||+|.+||||+|+ ..+...|++|+.... ...++++|+||.+||+++.++.
T Consensus 399 y~wG~n~~GqLG~g~~~~~~~~P~~v~~~~~--~~~~v~~v~cG~~~s~~~~~~~ 451 (473)
T 3of7_A 399 YSWGFGETYAVGLGPFEDDTEVPTRIKNTAT--QDHNIILVGCGGQFSVSGGVKL 451 (473)
T ss_dssp EEEECCTTCTTCCCSCCSCEEEEEECCCTTT--TTEEEEEEEECSSEEEEEEEEC
T ss_pred EEeeCCCCCCCCCCCCCccccCCeEeccccc--CCCeEEEEeeCCCeEEEEEecC
Confidence 999999999999999 778889999985321 2247999999999999998753
No 6
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=7.7e-66 Score=500.02 Aligned_cols=324 Identities=31% Similarity=0.583 Sum_probs=295.5
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCC-
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG- 145 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G- 145 (416)
.+|++|+||..|+++|++ +|+||+||.|.+||||++...+...|+++..+.. .+|++|+||..|+++|+++|
T Consensus 16 ~~v~~ia~G~~hs~al~~-----~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~--~~i~~va~G~~ht~al~~~gg 88 (406)
T 4d9s_A 16 RKVLIISAGASHSVALLS-----GDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDG--HQIVSVTCGADHTVAYSQSGM 88 (406)
T ss_dssp CCEEEEEECSSEEEEEET-----TTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTT--SCEEEEEECSSEEEEEETTTT
T ss_pred cceEEEecCCCeEEEEEe-----CCEEEEEeCCCCCCCCCCCcccCcCCEEecccCC--CCEEEEEeCcceEEEEECCCC
Confidence 599999999999999999 9999999999999999999999999999988876 68999999999999999886
Q ss_pred CEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeec
Q 014875 146 CLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225 (416)
Q Consensus 146 ~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~ 225 (416)
+||+||.|.+||||.++......|.++..+.+.+|++|+||..|+++|++ +|+||+||.|.+||||.+. ......
T Consensus 89 ~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~---~G~v~~wG~n~~GqLG~g~--~~~~~~ 163 (406)
T 4d9s_A 89 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM---EGEVQSWGRNQNGQLGLGD--TEDSLV 163 (406)
T ss_dssp EEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEET---TSCEEEEECCTTSTTCSSS--CCCEEE
T ss_pred EEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcC---CCcEEEeCCCCCccCCCCC--CCCccc
Confidence 99999999999999999888889999998888899999999999999999 9999999999999999984 345578
Q ss_pred CeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCC------CceecC--CCCCeeEEEecCceEEEEecC
Q 014875 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN------CPQSLP--SSLSFSQAALGWNHVLVLTGD 297 (416)
Q Consensus 226 p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~------~p~~~~--~~~~i~~i~~g~~~~~~lt~~ 297 (416)
|.++..+.+.+|++|+||..|+++|+++|+||+||.|.++|++.. .|..+. ...+|++|+||..|+++|+++
T Consensus 164 p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~ 243 (406)
T 4d9s_A 164 PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYS 243 (406)
T ss_dssp EEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETT
T ss_pred ceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCC
Confidence 889988888899999999999999999999999999999998743 455553 357899999999999999999
Q ss_pred CCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCCCCCccCCCCCCcc
Q 014875 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377 (416)
Q Consensus 298 g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~~~~ 377 (416)
|+||+||.|.+||||.++... ...|.++..+...+|++|+||.+|+++|+++|+||+||+|.+||||.++..+..
T Consensus 244 G~v~~wG~n~~GqlG~g~~~~-----~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~ 318 (406)
T 4d9s_A 244 GALYTYGWSKYGQLGHGDLED-----HLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQC 318 (406)
T ss_dssp CCEEEEECCTTSTTCSSSCCC-----EEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEE
T ss_pred CCEEEeeCCCCCCCCCCCCcC-----ccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCc
Confidence 999999999999999987553 455677777777889999999999999999999999999999999999999999
Q ss_pred CceEEecCCcccCCCceEEEeecCCeEEEEccCC
Q 014875 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHC 411 (416)
Q Consensus 378 ~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~~ 411 (416)
.|++|+++.. .+|++|+||.+|+++|+++-
T Consensus 319 ~p~~v~~~~~----~~v~~va~G~~hs~alt~~G 348 (406)
T 4d9s_A 319 SPVQVRFPDD----QKVVQVSCGWRHTLAVTERN 348 (406)
T ss_dssp EEEEECCGGG----CCEEEEEECSSEEEEEETTS
T ss_pred cCEEEeccCC----CcEEEEEeCCCeEEEEeCCC
Confidence 9999986533 37999999999999999763
No 7
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-61 Score=466.80 Aligned_cols=320 Identities=26% Similarity=0.414 Sum_probs=271.8
Q ss_pred EEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEE
Q 014875 70 SMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149 (416)
Q Consensus 70 ~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~ 149 (416)
+++..-..+.++|++ +|+||+||.|.+||||.++......|+++..+.. .+|++|+||..|+++|+++|+||+
T Consensus 4 ~~~~~~~~~~~~l~~-----~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~--~~i~~i~~G~~~~~~l~~~G~v~~ 76 (389)
T 3kci_A 4 HHHHSSGRENLYFQG-----SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAT--LRPVQLIGGEQTLFAVTADGKLYA 76 (389)
T ss_dssp ----------------------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHH--TCEEEEEEETTEEEEEETTSCEEE
T ss_pred cccccCcccceeECC-----CCeEEEeeCCCCccCCCCcCccccCCEecccccC--CceEEEEeCCCeEEEEcCCCcEEE
Confidence 345566778899999 9999999999999999998888889999988776 679999999999999999999999
Q ss_pred EcCCCCccccCCCCCCcccceEeeecCCCc--eEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCe
Q 014875 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKN--VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227 (416)
Q Consensus 150 ~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~--i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~ 227 (416)
||.|.+||||.++......|.++..+.... +++|+||.+|+++|++ +|+||+||.|.+||||.+. ......|.
T Consensus 77 wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~---~G~v~~wG~n~~GqLG~g~--~~~~~~p~ 151 (389)
T 3kci_A 77 TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS---EGEVYSWGEAEDGKLGHGN--RSPCDRPR 151 (389)
T ss_dssp EECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEET---TSCEEEEECCGGGTTCSSS--CCCEEEEE
T ss_pred EECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcC---CCCEEEEeCCCCCcCCCCC--CccCcCCe
Confidence 999999999999988888999998876654 5789999999999999 9999999999999999984 34557889
Q ss_pred EecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCC------CceecC--CCCCeeEEEecC--ceEEEEecC
Q 014875 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN------CPQSLP--SSLSFSQAALGW--NHVLVLTGD 297 (416)
Q Consensus 228 ~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~------~p~~~~--~~~~i~~i~~g~--~~~~~lt~~ 297 (416)
.+..+.+.+|++|+||..|+++|+++|+||+||.|.++|++.. .|+.+. ...+|++|+||. .|+++|+++
T Consensus 152 ~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~ 231 (389)
T 3kci_A 152 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD 231 (389)
T ss_dssp ECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETT
T ss_pred EecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccC
Confidence 9998888899999999999999999999999999999998843 344443 467899999984 899999999
Q ss_pred CCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCCCCCccCCCCCCcc
Q 014875 298 GEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEHGQLGLGNTCDQI 377 (416)
Q Consensus 298 g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~~~~ 377 (416)
|+||+||.|.+||||.+.... ...|.+++.+.+.+|++|+||.+|+++|+++|+||+||.|.+||||.+......
T Consensus 232 G~v~~wG~n~~GqLG~g~~~~-----~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~ 306 (389)
T 3kci_A 232 DTVWSWGDGDYGKLGRGGSDG-----CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR 306 (389)
T ss_dssp TEEEEEECCGGGTTSSSSCCC-----EEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEE
T ss_pred CEEEEEeCCCCCCCCCCCCCC-----ccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCcccc
Confidence 999999999999999986543 445777777887889999999999999999999999999999999999998888
Q ss_pred CceEEecCCcccCCCceEEEeecCCeEEEEccC
Q 014875 378 HPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410 (416)
Q Consensus 378 ~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~ 410 (416)
.|++|+.... .+|++|+||..|+++++++
T Consensus 307 ~P~~v~~l~~----~~v~~ia~G~~h~~al~~~ 335 (389)
T 3kci_A 307 RPRQVQGLQG----KKVIAIATGSLHCVCCTED 335 (389)
T ss_dssp EEEECGGGTT----CCEEEEEECSSEEEEEETT
T ss_pred CCeEeccCCC----CCEEEEEeccCeEEEECCC
Confidence 9999985532 3799999999999999876
No 8
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=2.5e-60 Score=462.81 Aligned_cols=312 Identities=25% Similarity=0.386 Sum_probs=267.9
Q ss_pred EEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCC-eeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEE
Q 014875 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVD-ALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFT 149 (416)
Q Consensus 71 ~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~-~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~ 149 (416)
+.+.+..|+++|++ +|+||+||.|.+||||++.... ...|+++..+ .+|++|+||..|+++|+++|+||+
T Consensus 12 ~~~~~~~h~~~l~~-----~g~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~~----~~i~~va~G~~hs~~l~~~G~v~~ 82 (413)
T 1a12_A 12 SKKVKVSHRSHSTE-----PGLVLTLGQGDVGQLGLGENVMERKKPALVSIP----EDVVQAEAGGMHTVCLSKSGQVYS 82 (413)
T ss_dssp -CCCCCCCTTCCCC-----CBEEEEEEECTTSTTCSCTTCCEEEEEEEECCS----SCEEEEEECSSEEEEEETTSCEEE
T ss_pred hhhhccccceeecC-----CCcEEEEECCCCCcCCCCCCccccccceEccCC----CCeEEEEeCCCeEEEEcCCCCEEE
Confidence 55666899999999 9999999999999999998654 6788888765 359999999999999999999999
Q ss_pred EcCCCCccccCCCCC--CcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCC--CCCCCCCCCCCCcceeec
Q 014875 150 CGDGTFGQLGHGDYR--SHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS--GKRGQLGVSKDRIRSVSL 225 (416)
Q Consensus 150 ~G~n~~gqlG~~~~~--~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~--n~~gqlG~~~~~~~~~~~ 225 (416)
||.|.+||||.++.. ....|.++.. ..+|++|+||.+|+++|++ +|+||+||. |.+||||.+. .......
T Consensus 83 wG~n~~GqLG~~~~~~~~~~~P~~v~l--~~~i~~va~G~~hs~alt~---~G~v~~wG~~~n~~GqlG~~~-~~~~~~~ 156 (413)
T 1a12_A 83 FGCNDEGALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTD---DGRVFLWGSFRDNNGVIGLLE-PMKKSMV 156 (413)
T ss_dssp EECCTTSTTCSCCCSTTGGGSCEECCC--CSCEEEEEECSSEEEEEET---TSCEEEEECEEETTEEEESSB-BTBCEEE
T ss_pred EECCCCCCCCCCCCCCccccCCeEecC--CCcEEEEecCCCeEEEEcC---CCcEEEeeCCcCCCCccCcCC-ccccccC
Confidence 999999999998763 4567888743 2489999999999999999 999999999 9999999873 2333445
Q ss_pred CeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCC-----------------CceecC-------CCCCe
Q 014875 226 PQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-----------------CPQSLP-------SSLSF 281 (416)
Q Consensus 226 p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~-----------------~p~~~~-------~~~~i 281 (416)
|.++ +...+|++|+||..|+++|+++|+||+||.|.++|++.. .|+.+. ...+|
T Consensus 157 P~~v--~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i 234 (413)
T 1a12_A 157 PVQV--QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF 234 (413)
T ss_dssp EEEE--CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCE
T ss_pred CEEe--cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccccCceEeeccccccCCccE
Confidence 7777 345689999999999999999999999999999999852 444343 34689
Q ss_pred eEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCC--CcEEEEecCCCeeEEEECCCCEEE
Q 014875 282 SQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDG--VKVIQIAAGAEHSAVVTENRAIMT 359 (416)
Q Consensus 282 ~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~--~~v~~i~~G~~h~~~l~~~g~vy~ 359 (416)
++|+||..|+++|+++|+||+||.|.+||||.+.... ...|.++..+.+ .+|++|+||.+|+++|+++|+||+
T Consensus 235 ~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~-----~~~P~~v~~l~~~~~~v~~ia~G~~hs~al~~~G~v~~ 309 (413)
T 1a12_A 235 QDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTES-----CFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS 309 (413)
T ss_dssp EEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSC-----EEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEE
T ss_pred EEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCc-----ccccEEchhccCCCceEEEEecccceEEEEeCCCCEEE
Confidence 9999999999999999999999999999999987653 345666666655 579999999999999999999999
Q ss_pred EECCCCCCccCC-CCCCccCceEEecCCcccCCCceEEEeecCCeEEEEccC
Q 014875 360 WGWGEHGQLGLG-NTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRH 410 (416)
Q Consensus 360 wG~n~~gqLG~g-~~~~~~~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~ 410 (416)
||.|.+||||.| +..+...|++|+... +|.+|+||..|+++|+++
T Consensus 310 wG~n~~GqLG~g~~~~~~~~P~~v~~l~------~v~~v~~G~~hs~alt~~ 355 (413)
T 1a12_A 310 LGRAEYGRLGLGEGAEEKSIPTLISRLP------AVSSVACGASVGYAVTKD 355 (413)
T ss_dssp EECCGGGTTCSCTTCCCEEEEEECCSSS------SEEEEEECSSEEEEEETT
T ss_pred eeCCCCCccCCCCCCccccCCEEecccC------ceeEEEECcceEEEEeCC
Confidence 999999999999 556667888887542 799999999999999876
No 9
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-60 Score=467.36 Aligned_cols=329 Identities=23% Similarity=0.354 Sum_probs=277.8
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCC---CeeceeEeeecCCCcccEEEEeecCceEEEEEe
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMV---DALYPKPVTFFDGHRYTITHISAGWNHSGFVSD 143 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~---~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~ 143 (416)
..|....+...|++++++ +++||+||.|.+||||+++.. ....|+++..+.....+|++|+||..|+++|++
T Consensus 10 ~~~~~~~~~~~h~~~~~~-----~g~v~~wG~n~~GqLG~G~~~~~~~~~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~ 84 (473)
T 3of7_A 10 SHIINAQEDYKHMYLSVQ-----PLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDE 84 (473)
T ss_dssp TTCCCCGGGGHHHHCCSS-----CCEEEEEEECTTSTTCSCSCGGGGEEEEEEECTTSCTTTTCEEEEEECSSEEEEEET
T ss_pred hhhhhhcccccccccCCC-----CccEEEEcCCCCCccCCCCCcccccccCcccccccccCCCCEEEEEeCCCeEEEEec
Confidence 467778889999999999 999999999999999999843 567788877664333689999999999999999
Q ss_pred CCCEEEEcCCCCccccCCCCCC-----------------------cccceEeee--c----CCCceEEEEeCCCeEEEEE
Q 014875 144 SGCLFTCGDGTFGQLGHGDYRS-----------------------HSSPVKVSS--F----VNKNVHQIACGMRHSLVLL 194 (416)
Q Consensus 144 ~G~v~~~G~n~~gqlG~~~~~~-----------------------~~~p~~v~~--~----~~~~i~~i~~G~~hs~~lt 194 (416)
+|+||+||.|.+||||.++... ...|.++.. + .+.+|++|+||.+|+++|+
T Consensus 85 ~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~~~~i~~va~G~~hs~alt 164 (473)
T 3of7_A 85 ESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALF 164 (473)
T ss_dssp TCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHHTTCCEEEEEECSSEEEEEE
T ss_pred CCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcccCCCcEEEEEccCCEEEEEe
Confidence 9999999999999999987654 457888875 4 3578999999999999999
Q ss_pred eccCCCeEEEeCC--CCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCC--
Q 014875 195 KDCLGNQVYGFGS--GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-- 270 (416)
Q Consensus 195 ~~~~~g~vy~wG~--n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~-- 270 (416)
+ +|+||+||. +.+||||...........|.++..+.+.+|++|+||..|+++|+++|+||+||.|.++|++..
T Consensus 165 ~---~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~ 241 (473)
T 3of7_A 165 S---NGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVM 241 (473)
T ss_dssp T---TSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCC
T ss_pred C---CCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCCCCCCCcc
Confidence 9 999999998 688999997666667788999998888889999999999999999999999999999998853
Q ss_pred --------CceecCCCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEe
Q 014875 271 --------CPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA 342 (416)
Q Consensus 271 --------~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 342 (416)
.|..+. ..+|++|+||.+|+++|+++|+||+||.|.+||||.+...... .....|.++..+.+.+|++|+
T Consensus 242 ~~~~~~~~~p~~~~-~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~-~~~~~P~~v~~~~~~~i~~ia 319 (473)
T 3of7_A 242 ERFRLKTLDPRPFG-LRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDG-ALVTKPKRLALPDNVVIRSIA 319 (473)
T ss_dssp GGGTTTTCSCEECS-CCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTT-CEEEEEEECCCCTTCCEEEEE
T ss_pred ccccccccCceecC-CcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCC-ceeeccccccccCCccEEEEE
Confidence 333332 3689999999999999999999999999999999998754221 234567777777778999999
Q ss_pred cCCCeeEEEECCCCEEEEECCCCCCccCCCCC--------------CccCceEEecCCcccCCCceEEEeecCCeEEEEc
Q 014875 343 AGAEHSAVVTENRAIMTWGWGEHGQLGLGNTC--------------DQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAIS 408 (416)
Q Consensus 343 ~G~~h~~~l~~~g~vy~wG~n~~gqLG~g~~~--------------~~~~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~ 408 (416)
||.+|+++|+++|+||+||.|.+||||.+... ....|+.|+ ...+|.+|+||..|+++|+
T Consensus 320 ~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~------~~~~v~~Ia~G~~hs~al~ 393 (473)
T 3of7_A 320 AGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLN------NVPKFKSVAAGSHHSVAVA 393 (473)
T ss_dssp ECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECC------SSCCEEEEEECSSEEEEEE
T ss_pred eCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccC------CCCceEEEEeCCCeEEEEe
Confidence 99999999999999999999999999987632 111333333 3337999999999999998
Q ss_pred cCC
Q 014875 409 RHC 411 (416)
Q Consensus 409 ~~~ 411 (416)
++-
T Consensus 394 ~~G 396 (473)
T 3of7_A 394 QNG 396 (473)
T ss_dssp TTS
T ss_pred CCC
Confidence 763
No 10
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=3.1e-59 Score=456.85 Aligned_cols=317 Identities=23% Similarity=0.293 Sum_probs=264.7
Q ss_pred CCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCC-CCeeceeEeeecCCCcccEEEEeecCceEEEEEeC
Q 014875 66 LSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEM-VDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDS 144 (416)
Q Consensus 66 ~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~-~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~ 144 (416)
..++++|++|..|+++|++ +|+||+||.|.+||||.+.. .....|+++..+.+ |++|+||..|+++|+++
T Consensus 23 ~~~~~~ia~g~~~~~~l~~-----~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~----v~~va~G~~h~~~l~~~ 93 (423)
T 3mvd_K 23 KAKRARIAFHLELPKRRTV-----LGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPD----AVDISAGGMHNLVLTKS 93 (423)
T ss_dssp ------CCCCCCCCCCCCC-----CEEEEEEEECTTSTTCSCSSCCEEEEEEECCSCSS----EEEEEECSSEEEEEETT
T ss_pred cceeeEEecCCccceeecC-----CCcEEEEeCCCCCCCCCCCCCccCcCCeEccCCCC----ceEEeeCCCeEEEEeCC
Confidence 3588899999999999999 99999999999999999965 35677888887765 99999999999999999
Q ss_pred CCEEEEcCCCCccccCCCCCC--cccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCC--CCCCCCCCCCCCc
Q 014875 145 GCLFTCGDGTFGQLGHGDYRS--HSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS--GKRGQLGVSKDRI 220 (416)
Q Consensus 145 G~v~~~G~n~~gqlG~~~~~~--~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~--n~~gqlG~~~~~~ 220 (416)
|+||+||.|.+||||.+.... ...|.++... .+|++|+||.+|+++|++ +|+||+||. |.+||||.+....
T Consensus 94 G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~--~~i~~va~G~~hs~al~~---~G~v~~wG~~~n~~GqlG~~~~~~ 168 (423)
T 3mvd_K 94 GDIYSFGCNDEGALGRDTSEDGSESKPDLIDLP--GKALCISAGDSHSACLLE---DGRVFAWGSFRDSHGNMGLTIDGN 168 (423)
T ss_dssp SCEEEEECCSSSTTCSCCCSTTSSSSCEECCCS--SCEEEEEECSSEEEEEET---TSCEEEEECEECSSSEEESBTTBC
T ss_pred CeEEEeECCCCcCCCCCCcCCccccCCeEEcCC--CCEEEEEcCcCeEEEEeC---CCeEEEEeCCCCCCCCcCcCCCCC
Confidence 999999999999999987654 5678887743 579999999999999999 999999999 9999999984333
Q ss_pred ceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCC-----------------Cceec--CCCCCe
Q 014875 221 RSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVN-----------------CPQSL--PSSLSF 281 (416)
Q Consensus 221 ~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~-----------------~p~~~--~~~~~i 281 (416)
...|..+ +...+|++|+||..|+++|+++|+||+||.|.++|++.. .|..+ +...+|
T Consensus 169 --~~~p~~~--~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v 244 (423)
T 3mvd_K 169 --KRTPIDL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPF 244 (423)
T ss_dssp --EEEEEES--STTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCE
T ss_pred --CceeeEe--cCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccE
Confidence 3445444 456689999999999999999999999999999998752 34444 345689
Q ss_pred eEEEecCceEEEE-ecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEE
Q 014875 282 SQAALGWNHVLVL-TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTW 360 (416)
Q Consensus 282 ~~i~~g~~~~~~l-t~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~w 360 (416)
++|+||..|++++ +++|+||+||.|.+||||.+..... ....|.++. ..+|++|+||.+|+++|+++|+||+|
T Consensus 245 ~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~---~~~~p~~~~---~~~v~~ia~G~~ht~alt~~G~v~~w 318 (423)
T 3mvd_K 245 EAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKE---FALTPIKTE---LKDIRHIAGGQHHTVILTTDLKCSVV 318 (423)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCS---EEEEEEEEC---CCSEEEEEECSSEEEEEETTCCEEEE
T ss_pred EEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCc---eeeeeEEcC---CCCeEEEEcccCeEEEEeCCCcEEEE
Confidence 9999999999999 6999999999999999999654321 122344443 24899999999999999999999999
Q ss_pred ECCCCCCccCCCCCC-ccCceEEecCCcccCCCceEEEeecCCeEEEEccCC
Q 014875 361 GWGEHGQLGLGNTCD-QIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHC 411 (416)
Q Consensus 361 G~n~~gqLG~g~~~~-~~~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~~ 411 (416)
|.|.+||||.++..+ ...|++|+.... +|++|+||..|+++|+++-
T Consensus 319 G~n~~GqLG~g~~~~~~~~p~~v~~l~~-----~v~~ia~G~~hs~alt~~G 365 (423)
T 3mvd_K 319 GRPEYGRLGLGDVKDVVEKPTIVKKLTE-----KIVSVGCGEVCSYAVTIDG 365 (423)
T ss_dssp ECCGGGTTCSSSCCSCEEEEEECTTCCS-----CEEEEEEETTEEEEEETTS
T ss_pred ECCCCCCCCCCCccccccCceEeccCCC-----CEEEEEcCCCeEEEEcCCC
Confidence 999999999998766 357888875431 7999999999999998763
No 11
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=2.1e-55 Score=404.63 Aligned_cols=275 Identities=26% Similarity=0.356 Sum_probs=227.3
Q ss_pred cEEEEEeCCCCCccccCCCCCCcCCeeeecCCCCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCee
Q 014875 34 VKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDAL 113 (416)
Q Consensus 34 g~v~~wG~n~~GqLG~g~~~~~~~p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~ 113 (416)
.+||+||+|...++.. .++ +...+|++|+||..|+++|+ +|+||+||.|.+||||.+.
T Consensus 2 ~~v~~WG~n~~~~~~~---------~p~--~~~~~i~~ia~G~~h~~~l~------~G~v~~wG~n~~Gqlg~p~----- 59 (282)
T 3qhy_B 2 TSVVAWGGNNDWGEAT---------VPA--EAQSGVDAIAGGYFHGLALK------GGKVLGWGANLNGQLTMPA----- 59 (282)
T ss_dssp CEEEEECSCCTTSTTC---------CCG--GGSSSCCEEEECSSEEEEEE------TTEEEEEECCSSSTTSCCG-----
T ss_pred eEEEEeCCCCCcCccc---------CCc--cccCCCcEEEeCCCeEEEEE------CCEEEEEeCCCCCCCCCCc-----
Confidence 3699999997655432 122 22358999999999999994 5999999999999999521
Q ss_pred ceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEE
Q 014875 114 YPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVL 193 (416)
Q Consensus 114 ~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~l 193 (416)
. .+ .+|++|+||.+|+++|+ +|+||+||.|.+||||. |.++. .+|++|+||.+|+++|
T Consensus 60 ---~--~~----~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~--------P~~~~----~~v~~ia~G~~hs~al 117 (282)
T 3qhy_B 60 ---A--TQ----SGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV--------PAEAR----SGVDAIAAGAWASYAL 117 (282)
T ss_dssp ---G--GG----SCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC--------CGGGS----SSEEEEEEETTEEEEE
T ss_pred ---c--CC----CCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC--------CcccC----CCeEEEECcCCEEEEE
Confidence 1 11 36999999999999996 99999999999999985 33332 4799999999999999
Q ss_pred EeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCce
Q 014875 194 LKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273 (416)
Q Consensus 194 t~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~ 273 (416)
+ + |+||+||.|.+||||... ....+|++|+||..|+++|+ +|+||+||.|.++|++.+.+
T Consensus 118 ~-~---G~v~~wG~n~~gqlg~~~--------------~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~- 177 (282)
T 3qhy_B 118 K-D---GKVIAWGDDSDGQTTVPA--------------EAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAE- 177 (282)
T ss_dssp E-T---TEEEEEECCTTSTTSCCG--------------GGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGG-
T ss_pred e-C---CeEEEecCCCCCcCCCCc--------------cCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCcee-
Confidence 9 4 999999999999998531 11236999999999999999 89999999999999985432
Q ss_pred ecCCCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEEC
Q 014875 274 SLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTE 353 (416)
Q Consensus 274 ~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~ 353 (416)
+ ..+|++|+||..|+++| ++|+||+||.|.+||||.+... + .+|++|+||.+|+++++
T Consensus 178 -~--~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~---------------~--~~v~~i~~G~~h~~al~- 235 (282)
T 3qhy_B 178 -A--QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEA---------------L--SGVSAIASGEWYSLALK- 235 (282)
T ss_dssp -G--GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGG---------------G--SSCCEEEECSSCEEEEE-
T ss_pred -c--CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCccc---------------C--CCceEEEcCCCEEEEEE-
Confidence 2 46899999999999999 8999999999999999975321 1 26899999999999999
Q ss_pred CCCEEEEECCCCCCccCCCCCCccCceEEecCCcccCCCceEEEeecCCeEEEEccCCCCC
Q 014875 354 NRAIMTWGWGEHGQLGLGNTCDQIHPKVVNLGDEFQNRDTQLEVFCGSGFTYAISRHCLPS 414 (416)
Q Consensus 354 ~g~vy~wG~n~~gqLG~g~~~~~~~p~~v~~~~~~~~~~~v~~v~~G~~~t~~i~~~~~~~ 414 (416)
+|+||+||+|.+||++.. ..|.+|+||..|+++|+++..|.
T Consensus 236 ~g~v~~wG~n~~gq~~v~--------------------~~v~~iaaG~~h~~al~~~~~~~ 276 (282)
T 3qhy_B 236 NGKVIAWGSSRTAPSSVQ--------------------SGVSSIEAGPNAAYALKGGSGSG 276 (282)
T ss_dssp TTEEEEESTTCCCCGGGS--------------------SCEEEEEECSSCEEEEEC-----
T ss_pred CCEEEEecCCCCccccCC--------------------CCcEEEEECcCeEEEEecCCCCC
Confidence 999999999999999741 15899999999999999988764
No 12
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=5.8e-49 Score=361.65 Aligned_cols=240 Identities=25% Similarity=0.310 Sum_probs=200.9
Q ss_pred hhceeecEEEEEeCCCCCccccCCCCCCcCCeeeecCCCCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCC
Q 014875 28 EEEQQVVKVWSWGAGTDGQLGTGRLHDELSPQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHG 107 (416)
Q Consensus 28 ~~~~~~g~v~~wG~n~~GqLG~g~~~~~~~p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~ 107 (416)
...+ +|+||+||.|.+||||.+ .+ ...+|++|+||..|+++| + +|+||+||.|.+||||.
T Consensus 37 ~~l~-~G~v~~wG~n~~Gqlg~p--------~~----~~~~i~~ia~G~~hs~~l-~-----~G~v~~wG~n~~Gqlg~- 96 (282)
T 3qhy_B 37 LALK-GGKVLGWGANLNGQLTMP--------AA----TQSGVDAIAAGNYHSLAL-K-----DGEVIAWGGNEDGQTTV- 96 (282)
T ss_dssp EEEE-TTEEEEEECCSSSTTSCC--------GG----GGSCCCEEEECSSEEEEE-E-----TTEEEEEECCTTSTTCC-
T ss_pred EEEE-CCEEEEEeCCCCCCCCCC--------cc----CCCCEEEEEeCCCEEEEE-E-----CCEEEEeeCCCCCCCCC-
Confidence 3445 899999999999999952 21 124899999999999999 6 79999999999999985
Q ss_pred CCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCC
Q 014875 108 EMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM 187 (416)
Q Consensus 108 ~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~ 187 (416)
|.++. .+|++|+||.+|+++|+ +|+||+||.|.+||||.. . ....+|++|+||.
T Consensus 97 -------P~~~~------~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~--------~----~~~~~i~~i~~G~ 150 (282)
T 3qhy_B 97 -------PAEAR------SGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVP--------A----EAQSGVTALDGGV 150 (282)
T ss_dssp -------CGGGS------SSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCC--------G----GGGSSEEEEEECS
T ss_pred -------CcccC------CCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCC--------c----cCCCCeEEEEccc
Confidence 33221 36999999999999999 999999999999999842 1 1225799999999
Q ss_pred CeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCC
Q 014875 188 RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTS 267 (416)
Q Consensus 188 ~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~ 267 (416)
+|+++|++ |+||+||.|.++|||.. ..+ ..+|++|+||..|+++| ++|+||+||.|.++|+
T Consensus 151 ~~~~~l~~----G~v~~wG~n~~gqlg~p----------~~~----~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 151 YTALAVKN----GGVIAWGDNYFGQTTVP----------AEA----QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp SEEEEEET----TEEEEEECCTTSTTSCC----------GGG----GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTT
T ss_pred CEEEEEEC----CEEEEecCCCCCCCCCc----------eec----CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCC
Confidence 99999874 99999999999999843 111 24799999999999999 8999999999999999
Q ss_pred CCCCceecCCCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCe
Q 014875 268 DVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEH 347 (416)
Q Consensus 268 ~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h 347 (416)
+.+.+ ...+|++|+||..|+++|+ +|+||+||.|.++|++.. ..|++|+||..|
T Consensus 212 g~p~~----~~~~v~~i~~G~~h~~al~-~g~v~~wG~n~~gq~~v~---------------------~~v~~iaaG~~h 265 (282)
T 3qhy_B 212 TVPTE----ALSGVSAIASGEWYSLALK-NGKVIAWGSSRTAPSSVQ---------------------SGVSSIEAGPNA 265 (282)
T ss_dssp CCCGG----GGSSCCEEEECSSCEEEEE-TTEEEEESTTCCCCGGGS---------------------SCEEEEEECSSC
T ss_pred CCCcc----cCCCceEEEcCCCEEEEEE-CCEEEEecCCCCccccCC---------------------CCcEEEEECcCe
Confidence 86543 3457999999999999999 999999999999988651 169999999999
Q ss_pred eEEEECCCCEE
Q 014875 348 SAVVTENRAIM 358 (416)
Q Consensus 348 ~~~l~~~g~vy 358 (416)
+++|+++++.+
T Consensus 266 ~~al~~~~~~~ 276 (282)
T 3qhy_B 266 AYALKGGSGSG 276 (282)
T ss_dssp EEEEEC-----
T ss_pred EEEEecCCCCC
Confidence 99999987654
No 13
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.92 E-value=0.29 Score=46.41 Aligned_cols=241 Identities=9% Similarity=0.042 Sum_probs=132.3
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCC
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~ 146 (416)
..|..++......+.-.. ||.|..|-.... ..+..+......|..++......+.-..+|.
T Consensus 174 ~~v~~l~~~~~~l~sg~~-----dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~ 234 (435)
T 1p22_A 174 GSVLCLQYDERVIITGSS-----DSTVRVWDVNTG--------------EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS 234 (435)
T ss_dssp SCEEEEECCSSEEEEEET-----TSCEEEEESSSC--------------CEEEEECCCCSCEEEEECCTTEEEEEETTSC
T ss_pred CcEEEEEECCCEEEEEcC-----CCeEEEEECCCC--------------cEEEEEcCCCCcEEEEEEcCCEEEEeeCCCc
Confidence 477788874444444455 899999975321 1222233333568888877777777788999
Q ss_pred EEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecC
Q 014875 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226 (416)
Q Consensus 147 v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p 226 (416)
|..|-...... ........-....|..++....+.+.-.. +|.|..|-.... + ..
T Consensus 235 i~vwd~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~l~s~~~---dg~i~vwd~~~~-~------------~~ 289 (435)
T 1p22_A 235 IAVWDMASPTD---------ITLRRVLVGHRAAVNVVDFDDKYIVSASG---DRTIKVWNTSTC-E------------FV 289 (435)
T ss_dssp EEEEECSSSSC---------CEEEEEECCCSSCEEEEEEETTEEEEEET---TSEEEEEETTTC-C------------EE
T ss_pred EEEEeCCCCCC---------ceeeeEecCCCCcEEEEEeCCCEEEEEeC---CCeEEEEECCcC-c------------EE
Confidence 99996432111 11111111122457777775555555556 899999953221 0 01
Q ss_pred eEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCceEEEEecCCCEEEeeCC
Q 014875 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 227 ~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n 306 (416)
..+. .....|..++......++-..+|.|..|-...... ..........|..++......+.-+.||.|..|-..
T Consensus 290 ~~~~-~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 290 RTLN-GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EEEE-CCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHH
T ss_pred EEEc-CCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCE----EEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECC
Confidence 1111 12235667776677777788899999996533211 111112345677787777777777889999999643
Q ss_pred CCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCC
Q 014875 307 HHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 307 ~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~ 364 (416)
......... .......+.. ....|..++....+.+....||.|..|-...
T Consensus 365 ~~~~~~~~~-------~~~~~~~~~~-h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 365 AALDPRAPA-------GTLCLRTLVE-HSGRVFRLQFDEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp HHTSTTSCT-------TTTEEEEECC-CSSCCCCEEECSSCEEECCSSSEEEEEC---
T ss_pred CCCCccccc-------cchheeeccC-CCCCeEEEEeCCCEEEEEeCCCEEEEEECCC
Confidence 211000000 0001111111 1124555555555555556789999997655
No 14
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=96.81 E-value=0.0033 Score=54.07 Aligned_cols=70 Identities=23% Similarity=0.407 Sum_probs=60.7
Q ss_pred CCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEE
Q 014875 279 LSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIM 358 (416)
Q Consensus 279 ~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy 358 (416)
.+|..|+.-+.|+.++--++++|.||+++.||+-.+.... ...++++|..+++-+..-+.+-
T Consensus 309 n~i~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip~tag------------------Pfla~~AG~~fTVTVn~~nyv~ 370 (400)
T 4gbf_A 309 NPIGGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVDDHAG------------------PYIQLAAGHNFTVTVNTLNQVM 370 (400)
T ss_dssp SCCCCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCCGGGC------------------CEEEEEECSSEEEEEETTCCEE
T ss_pred CccccccccccceEEEecCceeEEeccCCCCceecCCCcc------------------hHHhHhccCCeEEEEeceeeEE
Confidence 6788899999999999999999999999999998765432 5789999999999999999999
Q ss_pred EEECCCCC
Q 014875 359 TWGWGEHG 366 (416)
Q Consensus 359 ~wG~n~~g 366 (416)
.||+...-
T Consensus 371 FWGDSPDN 378 (400)
T 4gbf_A 371 FWGDSPDN 378 (400)
T ss_dssp EEECCTTS
T ss_pred EecCCCCc
Confidence 99986543
No 15
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.39 E-value=0.7 Score=43.82 Aligned_cols=230 Identities=10% Similarity=0.013 Sum_probs=133.3
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCC
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGC 146 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~ 146 (416)
..|..++......+.-.. ||.|+.|-.... ..+..+......|..++......+.-..+|.
T Consensus 160 ~~v~~~~~~~~~l~s~~~-----dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~ 220 (445)
T 2ovr_B 160 GGVWSSQMRDNIIISGST-----DRTLKVWNAETG--------------ECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 220 (445)
T ss_dssp SCEEEEEEETTEEEEEET-----TSCEEEEETTTT--------------EEEEEECCCSSCEEEEEEETTEEEEEETTSE
T ss_pred CCEEEEEecCCEEEEEeC-----CCeEEEEECCcC--------------cEEEEECCCCCcEEEEEecCCEEEEEeCCCE
Confidence 366666665554455555 888998864321 2222233333567777776777777788899
Q ss_pred EEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecC
Q 014875 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226 (416)
Q Consensus 147 v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p 226 (416)
|..|-..... +..........|..++......+.-.. +|.|+.|-.... ...
T Consensus 221 i~~wd~~~~~------------~~~~~~~~~~~v~~~~~~~~~l~~~~~---dg~i~iwd~~~~-------------~~~ 272 (445)
T 2ovr_B 221 LRVWDIETGQ------------CLHVLMGHVAAVRCVQYDGRRVVSGAY---DFMVKVWDPETE-------------TCL 272 (445)
T ss_dssp EEEEESSSCC------------EEEEEECCSSCEEEEEECSSCEEEEET---TSCEEEEEGGGT-------------EEE
T ss_pred EEEEECCCCc------------EEEEEcCCcccEEEEEECCCEEEEEcC---CCEEEEEECCCC-------------cEe
Confidence 9999643211 111111122457777765555555555 899999942210 001
Q ss_pred eEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCceEEEEecCCCEEEeeCC
Q 014875 227 QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 227 ~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n 306 (416)
..+. .....|..+.....+.+.-..+|.|+.|-....... .........+..+.......+.-..||.|..|-..
T Consensus 273 ~~~~-~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 273 HTLQ-GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI----HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp EEEC-CCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEE----EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EEec-CCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEE----EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECC
Confidence 1111 122357777776777777788999999965332111 11112334566677777777777889999999653
Q ss_pred CCCCCCCCCCCcccCccccceeeecc--CCCCcEEEEecCCCeeEEEECCCCEEEEECCC
Q 014875 307 HHGMLSDPERVSSTRPLSVALEKVSN--LDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 307 ~~gqlG~~~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~ 364 (416)
.... ...+.. .....|..++....+.+.-..||.|..|-...
T Consensus 348 ~~~~----------------~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 348 TGQC----------------LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp TCCE----------------EEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred CCcE----------------EEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 2110 111111 12235777777777777778899999997654
No 16
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.36 E-value=0.72 Score=43.65 Aligned_cols=230 Identities=8% Similarity=0.006 Sum_probs=136.1
Q ss_pred CeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCE
Q 014875 68 SVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCL 147 (416)
Q Consensus 68 ~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v 147 (416)
.|..++......+.-.. ||.|..|-... ...+..+......|..++......+.-..||.|
T Consensus 135 ~v~~~~~d~~~l~~g~~-----dg~i~iwd~~~--------------~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i 195 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLR-----DNTIKIWDKNT--------------LECKRILTGHTGSVLCLQYDERVIITGSSDSTV 195 (435)
T ss_dssp CEEEEECCSSEEEEEES-----SSCEEEEESSS--------------CCEEEEECCCSSCEEEEECCSSEEEEEETTSCE
T ss_pred cEEEEEECCCEEEEEeC-----CCeEEEEeCCC--------------CeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeE
Confidence 56677776666666666 89999996432 112223333335688888766666666789999
Q ss_pred EEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCe
Q 014875 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQ 227 (416)
Q Consensus 148 ~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~ 227 (416)
..|-....-. ...+. .....|..++......+.-.. +|.|..|-...... . ...
T Consensus 196 ~vwd~~~~~~-----------~~~~~-~h~~~v~~l~~~~~~l~s~s~---dg~i~vwd~~~~~~----------~-~~~ 249 (435)
T 1p22_A 196 RVWDVNTGEM-----------LNTLI-HHCEAVLHLRFNNGMMVTCSK---DRSIAVWDMASPTD----------I-TLR 249 (435)
T ss_dssp EEEESSSCCE-----------EEEEC-CCCSCEEEEECCTTEEEEEET---TSCEEEEECSSSSC----------C-EEE
T ss_pred EEEECCCCcE-----------EEEEc-CCCCcEEEEEEcCCEEEEeeC---CCcEEEEeCCCCCC----------c-eee
Confidence 9997543111 01111 122457777776665555556 89999994322110 0 011
Q ss_pred EecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCceEEEEecCCCEEEeeCCC
Q 014875 228 VTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307 (416)
Q Consensus 228 ~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~ 307 (416)
.........|..++....+.++-..+|.|..|-...... ..........|..+.......+.-..||.|..|-...
T Consensus 250 ~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 250 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp EEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred eEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE----EEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCC
Confidence 111122335777777777777788899999996532211 0111123456777777777777778899999996542
Q ss_pred CCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECC
Q 014875 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWG 363 (416)
Q Consensus 308 ~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n 363 (416)
.. ....+.. ....|..++....+.+.-..||.|..|-..
T Consensus 326 ~~----------------~~~~~~~-h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 326 GA----------------CLRVLEG-HEELVRCIRFDNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp CC----------------EEEEECC-CSSCEEEEECCSSEEEEEETTSCEEEEEHH
T ss_pred CC----------------EEEEEeC-CcCcEEEEEecCCEEEEEeCCCcEEEEECC
Confidence 10 0111111 223577777766666677889999999753
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.54 E-value=2.5 Score=43.07 Aligned_cols=63 Identities=17% Similarity=0.103 Sum_probs=33.1
Q ss_pred CceEEEEEe-CCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEE----eCCCeEEEEEeccCCCeEEEeCC
Q 014875 135 WNHSGFVSD-SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIA----CGMRHSLVLLKDCLGNQVYGFGS 207 (416)
Q Consensus 135 ~~~~~~lt~-~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~----~G~~hs~~lt~~~~~g~vy~wG~ 207 (416)
..|+++... +|+||++|-.... .. ...-..+-.+.......+. .-..|++++.. +++||++|-
T Consensus 441 ~~hs~~~~~~~~~lyv~GG~~~~----~~---~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~---~~~iyv~GG 508 (695)
T 2zwa_A 441 MCHTFTTISRNNQLLLIGGRKAP----HQ---GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP---DGNVLILGG 508 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBSST----TC---BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT---TSCEEEECC
T ss_pred cceEEEEEccCCEEEEEcCCCCC----CC---ccccEEEEeCCCCcEEECCCCCCCcccceEEEEc---CCEEEEECC
Confidence 367777775 8999999832211 00 0000111111111222221 23568888865 699999984
No 18
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=95.36 E-value=0.021 Score=49.18 Aligned_cols=71 Identities=15% Similarity=0.277 Sum_probs=58.9
Q ss_pred CceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEE
Q 014875 178 KNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLY 257 (416)
Q Consensus 178 ~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy 257 (416)
..|..|+-.+.|..++.- +++++.+|+++.||+-..... -+..++.+|.++++-+..-..+-
T Consensus 309 n~i~~VsG~y~H~vvi~g---d~el~sFG~~sNGQ~~ip~ta---------------gPfla~~AG~~fTVTVn~~nyv~ 370 (400)
T 4gbf_A 309 NPIGGVSGLYTHYTVMYG---DGQIAFFGNNDNGQCDVDDHA---------------GPYIQLAAGHNFTVTVNTLNQVM 370 (400)
T ss_dssp SCCCCCBCSSSEEEC-CT---TTCCCEEECCTTSTTCCCGGG---------------CCEEEEEECSSEEEEEETTCCEE
T ss_pred CccccccccccceEEEec---CceeEEeccCCCCceecCCCc---------------chHHhHhccCCeEEEEeceeeEE
Confidence 468889988999999888 899999999999999655211 25889999999999999999999
Q ss_pred EeeCCCCCC
Q 014875 258 TWGRGFNST 266 (416)
Q Consensus 258 ~wG~~~~~~ 266 (416)
.||+...+.
T Consensus 371 FWGDSPDNS 379 (400)
T 4gbf_A 371 FWGDSPDNS 379 (400)
T ss_dssp EEECCTTST
T ss_pred EecCCCCcc
Confidence 999854443
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.30 E-value=2 Score=40.57 Aligned_cols=226 Identities=10% Similarity=0.031 Sum_probs=128.6
Q ss_pred eEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCCCEE
Q 014875 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSGCLF 148 (416)
Q Consensus 69 i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~ 148 (416)
+..++.-+...+.-.. ||.|..|-.... ..+..+......|..++......+.-..||.|.
T Consensus 122 ~~~~~~~g~~l~sg~~-----dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSD-----DNTLKVWSAVTG--------------KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLK 182 (445)
T ss_dssp EEEEEEETTEEEEEET-----TSCEEEEETTTC--------------CEEEECCCCSSCEEEEEEETTEEEEEETTSCEE
T ss_pred EEEEEEcCCEEEEEEC-----CCcEEEEECCCC--------------cEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEE
Confidence 4455554444444555 899999975321 122223333355777776666677778899999
Q ss_pred EEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeE
Q 014875 149 TCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228 (416)
Q Consensus 149 ~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~ 228 (416)
.|-...... ...+.. ....|..++......+.-.. +|.|+.|-.... + ....
T Consensus 183 vwd~~~~~~-----------~~~~~~-h~~~v~~~~~~~~~l~s~s~---dg~i~~wd~~~~-~------------~~~~ 234 (445)
T 2ovr_B 183 VWNAETGEC-----------IHTLYG-HTSTVRCMHLHEKRVVSGSR---DATLRVWDIETG-Q------------CLHV 234 (445)
T ss_dssp EEETTTTEE-----------EEEECC-CSSCEEEEEEETTEEEEEET---TSEEEEEESSSC-C------------EEEE
T ss_pred EEECCcCcE-----------EEEECC-CCCcEEEEEecCCEEEEEeC---CCEEEEEECCCC-c------------EEEE
Confidence 996432111 011111 12457777766666555566 899999943321 0 0011
Q ss_pred ecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEecCceEEEEecCCCEEEeeCCC
Q 014875 229 TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALGWNHVLVLTGDGEVLMLGGSH 307 (416)
Q Consensus 229 ~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~ 307 (416)
+. .....|..++......++-..+|.|+.|-...... ...+ .....|..+.....+.+.-+.||.|..|-...
T Consensus 235 ~~-~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~ 308 (445)
T 2ovr_B 235 LM-GHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC-----LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET 308 (445)
T ss_dssp EE-CCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEE-----EEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTT
T ss_pred Ec-CCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcE-----eEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 11 12235667766677777788899999996432110 1111 23456777777777777778899999996542
Q ss_pred CCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCC
Q 014875 308 HGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 308 ~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~ 364 (416)
... ...+.. ....+..++......+.-..||.|..|-...
T Consensus 309 ~~~----------------~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~ 348 (445)
T 2ovr_B 309 GNC----------------IHTLTG-HQSLTSGMELKDNILVSGNADSTVKIWDIKT 348 (445)
T ss_dssp CCE----------------EEEECC-CCSCEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred CCE----------------EEEEcC-CcccEEEEEEeCCEEEEEeCCCeEEEEECCC
Confidence 110 011111 1124555555566666677888888887643
No 20
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.19 E-value=1.8 Score=39.36 Aligned_cols=245 Identities=12% Similarity=0.018 Sum_probs=121.2
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec----CceEEEEE
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG----WNHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G----~~~~~~lt 142 (416)
..|..++......++++.+. ||.|+.|=... .....+..+......|..++.. ....+.-.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSS---DKTIKIFEVEG------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp CCEEEEEECSSSSEEEEEET---TSCEEEEEEET------------TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccEEEEEEcCCCCEEEEEEC---CCcEEEEecCC------------CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec
Confidence 36777776544433333211 78888886431 1223333344434567777764 34555567
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC----eEEEEEeccCCCeEEEeCCCCCCCCCCCCC
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR----HSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~----hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~ 218 (416)
.||.|..|-.... ...+..........|..++...+ ..+.... +|.|..|-.......
T Consensus 77 ~dg~v~iwd~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~----- 138 (379)
T 3jrp_A 77 YDGKVLIWKEENG----------RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTT----- 138 (379)
T ss_dssp TTSCEEEEEEETT----------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTTSCC-----
T ss_pred cCCEEEEEEcCCC----------ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCCCce-----
Confidence 7899999964321 00111111112345777776543 2333344 899999954322110
Q ss_pred CcceeecCeEecccCCCCEEEEecC---------------CCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCee
Q 014875 219 RIRSVSLPQVTIGLHDIEIVGISAN---------------GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFS 282 (416)
Q Consensus 219 ~~~~~~~p~~~~~~~~~~i~~i~~g---------------~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~ 282 (416)
.+..+. .....|..++.. ....++-..+|.|+.|-......... ....+ .....|.
T Consensus 139 ------~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 139 ------SPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-LESTLEGHSDWVR 210 (379)
T ss_dssp ------CEEEEE-CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE-EEEEECCCSSCEE
T ss_pred ------eeEEec-CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee-eEEEEecccCcEe
Confidence 011111 112245555443 34556667899999995432211100 00111 1245677
Q ss_pred EEEecC-----ceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCC--CeeEEEECCC
Q 014875 283 QAALGW-----NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENR 355 (416)
Q Consensus 283 ~i~~g~-----~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~--~h~~~l~~~g 355 (416)
.++... ...+....||.|+.|-....... ........ ......|..++... .+.++...||
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg 278 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP-----------WKKTLLKE-EKFPDVLWRASWSLSGNVLALSGGDN 278 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-----------CEEEESSS-SCCSSCEEEEEECSSSCCEEEEESSS
T ss_pred EEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc-----------ceeeeecc-ccCCCcEEEEEEcCCCCEEEEecCCC
Confidence 776653 34555577899999965431100 00000000 00122455555433 3444456889
Q ss_pred CEEEEECCC
Q 014875 356 AIMTWGWGE 364 (416)
Q Consensus 356 ~vy~wG~n~ 364 (416)
.|+.|=.+.
T Consensus 279 ~i~iw~~~~ 287 (379)
T 3jrp_A 279 KVTLWKENL 287 (379)
T ss_dssp SEEEEEEEE
T ss_pred cEEEEeCCC
Confidence 999997653
No 21
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.19 E-value=1.7 Score=39.19 Aligned_cols=194 Identities=11% Similarity=-0.007 Sum_probs=99.6
Q ss_pred CCCeEEEEeCCc----ceEEe-eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceE
Q 014875 66 LSSVSMLACGGA----HVLAL-TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHS 138 (416)
Q Consensus 66 ~~~i~~ia~G~~----h~~~l-t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~ 138 (416)
...|..|+.... ..++. .. ||.|..|-....++ .....+.. ....|..++... .+.
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~-----dg~i~iw~~~~~~~---------~~~~~~~~---h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSW-----ANDVRCWEVQDSGQ---------TIPKAQQM---HTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEET-----TSEEEEEEECTTSC---------EEEEEEEE---CSSCEEEEEECTTSSEE
T ss_pred CCceEEEEEcCCCCCceEEEEECC-----CCcEEEEEcCCCCc---------eeEEEecc---ccCCEEEEEECcCCCEE
Confidence 358888888765 33333 34 89999997654221 11111111 123566666543 345
Q ss_pred EEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEe--CCC-eEEEEEeccCCCeEEEeCCCCCCCCCC
Q 014875 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC--GMR-HSLVLLKDCLGNQVYGFGSGKRGQLGV 215 (416)
Q Consensus 139 ~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~-hs~~lt~~~~~g~vy~wG~n~~gqlG~ 215 (416)
+....+|.|..|-..... ...+.. ....|..++. ..+ ..++.... +|.|+.|-.....
T Consensus 102 ~s~~~dg~v~iwd~~~~~------------~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~---- 162 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQ------------AIQIAQ-HDAPVKTIHWIKAPNYSCVMTGSW--DKTLKFWDTRSSN---- 162 (368)
T ss_dssp EEEETTSEEEEEETTTTE------------EEEEEE-CSSCEEEEEEEECSSCEEEEEEET--TSEEEEECSSCSS----
T ss_pred EEEcCCCcEEEEEcCCCC------------ceeecc-ccCceEEEEEEeCCCCCEEEEccC--CCcEEEEECCCCc----
Confidence 555678999999654311 112222 2345777775 333 33333332 8999999533210
Q ss_pred CCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCce----E
Q 014875 216 SKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNH----V 291 (416)
Q Consensus 216 ~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~----~ 291 (416)
.. ..+.. ...+..+.......++.+.++.++.|-.......-............+..+...... .
T Consensus 163 ---~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 163 ---PM------MVLQL--PERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp ---CS------EEEEC--SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred ---EE------EEEec--CCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE
Confidence 01 11111 114555555566777888899999996643211100000001112223333333322 6
Q ss_pred EEEecCCCEEEeeCC
Q 014875 292 LVLTGDGEVLMLGGS 306 (416)
Q Consensus 292 ~~lt~~g~vy~~G~n 306 (416)
++-+.+|.+..|-..
T Consensus 232 ~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 232 ALGSIEGRVAIHYIN 246 (368)
T ss_dssp EEEETTSEEEEEESS
T ss_pred EEecCCCcEEEEecC
Confidence 666788988888654
No 22
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.40 E-value=5.2 Score=40.97 Aligned_cols=198 Identities=12% Similarity=0.022 Sum_probs=101.0
Q ss_pred CeEEEEeCCcce--EEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec----CceEEEE
Q 014875 68 SVSMLACGGAHV--LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG----WNHSGFV 141 (416)
Q Consensus 68 ~i~~ia~G~~h~--~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G----~~~~~~l 141 (416)
.|..++...... +.-.. ||.|..|-... .....+..+......|..++.. ....+.-
T Consensus 11 ~V~~l~~s~dg~~latg~~-----dg~I~vwd~~~------------~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~ 73 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSS-----DKTIKIFEVEG------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC 73 (753)
T ss_dssp CEEEECCCSSSCCEEEEET-----TTEEEEEEEET------------TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEE
T ss_pred eeEEEEECCCCCeEEEEEC-----CCcEEEEecCC------------CCCccceeccCCcCceEEEEecCCCCCCEEEEE
Confidence 566666543322 22334 89999996421 0123333444444568777764 3455566
Q ss_pred EeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC----eEEEEEeccCCCeEEEeCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR----HSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~----hs~~lt~~~~~g~vy~wG~n~~gqlG~~~ 217 (416)
..||.|+.|-.... ...+..........|..++...+ ..+.-.. +|.|+.|-.......
T Consensus 74 s~Dg~I~vwd~~~~----------~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~---- 136 (753)
T 3jro_A 74 SYDGKVLIWKEENG----------RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTT---- 136 (753)
T ss_dssp ETTSCEEEEEEETT----------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCC----
T ss_pred eCCCeEEEEECCCC----------cccccccccCCCCCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCc----
Confidence 78899999964321 00111111112345777776543 3333344 899999954322110
Q ss_pred CCcceeecCeEecccCCCCEEEEecC---------------CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCee
Q 014875 218 DRIRSVSLPQVTIGLHDIEIVGISAN---------------GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFS 282 (416)
Q Consensus 218 ~~~~~~~~p~~~~~~~~~~i~~i~~g---------------~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~ 282 (416)
.+..+.. ....|..+... ....+.-..+|.|+.|-....................|.
T Consensus 137 -------~~~~~~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 137 -------SPIIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp -------CCEEEEC-CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred -------ceeEeec-CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 1111111 12245555443 345566677999999955322111000001112345677
Q ss_pred EEEecC-----ceEEEEecCCCEEEeeCCC
Q 014875 283 QAALGW-----NHVLVLTGDGEVLMLGGSH 307 (416)
Q Consensus 283 ~i~~g~-----~~~~~lt~~g~vy~~G~n~ 307 (416)
.++... ...+.-..||.|+.|-...
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 777653 3455556789999996543
No 23
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.85 E-value=4.8 Score=35.62 Aligned_cols=189 Identities=7% Similarity=-0.094 Sum_probs=96.1
Q ss_pred CCCeEEEEeCCcce--EEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec--CceEEEE
Q 014875 66 LSSVSMLACGGAHV--LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WNHSGFV 141 (416)
Q Consensus 66 ~~~i~~ia~G~~h~--~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G--~~~~~~l 141 (416)
...|..++...... +.-.. ++.|+.|-.... .+.....+......|..++.. ..+.+.-
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 159 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGGE-----ASTLSIWDLAAP------------TPRIKAELTSSAPACYALAISPDSKVCFSC 159 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEES-----SSEEEEEECCCC--------------EEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEcC-----CCcEEEEECCCC------------CcceeeecccCCCceEEEEECCCCCEEEEE
Confidence 34677777654433 33344 789999864321 111222222222346666553 3445555
Q ss_pred EeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~ 219 (416)
..+|.|+.|-...... ...+.. ....|..++...+ ..+.... +|.|+.|-....
T Consensus 160 ~~dg~v~~~d~~~~~~-----------~~~~~~-~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~--------- 215 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTL-----------VRQFQG-HTDGASCIDISNDGTKLWTGGL---DNTVRSWDLREG--------- 215 (337)
T ss_dssp ETTSCEEEEETTTTEE-----------EEEECC-CSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTT---------
T ss_pred eCCCcEEEEeCCCCce-----------eeeeec-ccCceEEEEECCCCCEEEEEec---CCcEEEEECCCC---------
Confidence 6789999996432111 111111 2245777766533 3333344 899999953321
Q ss_pred cceeecCeEecccCCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec--CceEEEEe
Q 014875 220 IRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG--WNHVLVLT 295 (416)
Q Consensus 220 ~~~~~~p~~~~~~~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g--~~~~~~lt 295 (416)
.. ...+.. ...+..++. .....++-..+|.|+.|-...... .........|..++.. ....+...
T Consensus 216 -~~---~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 216 -RQ---LQQHDF--TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-----YQLHLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp -EE---EEEEEC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-----EEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -ce---EeeecC--CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-----EEEcCCccceeEEEECCCCCEEEEec
Confidence 00 001111 123444443 334555566788999986533211 1112234566666665 34455556
Q ss_pred cCCCEEEeeCC
Q 014875 296 GDGEVLMLGGS 306 (416)
Q Consensus 296 ~~g~vy~~G~n 306 (416)
.+|.|+.|-..
T Consensus 285 ~dg~i~~~~~~ 295 (337)
T 1gxr_A 285 KDNLLNAWRTP 295 (337)
T ss_dssp TTSEEEEEETT
T ss_pred CCCcEEEEECC
Confidence 78888888653
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.49 E-value=9.7 Score=38.23 Aligned_cols=66 Identities=21% Similarity=0.284 Sum_probs=36.1
Q ss_pred CeEEEEeCCCcEEEeeCCCCCC-----CCCCCceec-CCCCCeeEEE----ecCceE-EEEecCCCEEEeeCCCCCC
Q 014875 245 DRSAALSAEGHLYTWGRGFNST-----SDVNCPQSL-PSSLSFSQAA----LGWNHV-LVLTGDGEVLMLGGSHHGM 310 (416)
Q Consensus 245 ~~~~~lt~~G~vy~wG~~~~~~-----~~~~~p~~~-~~~~~i~~i~----~g~~~~-~~lt~~g~vy~~G~n~~gq 310 (416)
.|++++..+|+||+.|-...+. .....+... +...+...+. .-..|+ +++..+|+||..|.+.++.
T Consensus 458 ~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~ 534 (656)
T 1k3i_A 458 FHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGD 534 (656)
T ss_dssp SCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTT
T ss_pred cCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCCC
Confidence 5777777799999998643221 001111111 1122222222 123455 4556799999999976553
No 25
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.18 E-value=6.2 Score=35.35 Aligned_cols=251 Identities=12% Similarity=0.023 Sum_probs=117.8
Q ss_pred CCeEEEEeCCc------ceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec---Cce
Q 014875 67 SSVSMLACGGA------HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG---WNH 137 (416)
Q Consensus 67 ~~i~~ia~G~~------h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G---~~~ 137 (416)
..|..++.... ..+.-.. ||.|..|-.... ..+..+......|..++.. ...
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~-----dg~i~v~d~~~~--------------~~~~~~~~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGS-----RGIIRIINPITM--------------QCIKHYVGHGNAINELKFHPRDPNL 130 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEET-----TCEEEEECTTTC--------------CEEEEEESCCSCEEEEEECSSCTTE
T ss_pred CcEEEEEeccCCCCCCCEEEEecC-----CCEEEEEEchhc--------------eEeeeecCCCCcEEEEEECCCCCCE
Confidence 45666665433 2333344 889999964321 1122222222457777664 344
Q ss_pred EEEEEeCCCEEEEcCCCCccccCCCCCCcccceEee--ecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCC
Q 014875 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS--SFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQL 213 (416)
Q Consensus 138 ~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~--~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gql 213 (416)
.+.-..+|.|+.|-...... ...+. ......|..++...+ +.+.... +|.|+.|-......+
T Consensus 131 l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTL-----------VAIFGGVEGHRDEVLSADYDLLGEKIMSCGM---DHSLKLWRINSKRMM 196 (366)
T ss_dssp EEEEETTSCEEEEETTTTEE-----------EEEECSTTSCSSCEEEEEECTTSSEEEEEET---TSCEEEEESCSHHHH
T ss_pred EEEEeCCCeEEEEEeecCeE-----------EEEecccccccCceeEEEECCCCCEEEEecC---CCCEEEEECCCCccc
Confidence 55556789999996532111 01110 112345777776533 3333334 899999954321100
Q ss_pred C-------CCC------CCcceeecCeE-ecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCC------CCce
Q 014875 214 G-------VSK------DRIRSVSLPQV-TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDV------NCPQ 273 (416)
Q Consensus 214 G-------~~~------~~~~~~~~p~~-~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~------~~p~ 273 (416)
. ..+ ........|.. ........|..++......+.-..+|.|..|-.......-. ....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 276 (366)
T 3k26_A 197 NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVT 276 (366)
T ss_dssp HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEE
T ss_pred cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchh
Confidence 0 000 00000000100 11112234555555466777778899999997643322100 0000
Q ss_pred ec----CCCCCeeEEEec----CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCC-CCcEEEEecC
Q 014875 274 SL----PSSLSFSQAALG----WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD-GVKVIQIAAG 344 (416)
Q Consensus 274 ~~----~~~~~i~~i~~g----~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~G 344 (416)
.+ .....|..++.. ....+.-+.+|.|+.|-....... ......+.... ...|..++..
T Consensus 277 ~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 277 ILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH------------KAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp EEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG------------GCEEEEECCTTCCSCEEEEEEC
T ss_pred eeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc------------cccceEEcccccCCceEEEEeC
Confidence 00 111223333332 345555677888999865421100 10111222211 2356666554
Q ss_pred --CCeeEEEECCCCEEEEEC
Q 014875 345 --AEHSAVVTENRAIMTWGW 362 (416)
Q Consensus 345 --~~h~~~l~~~g~vy~wG~ 362 (416)
..+.+.-..||.|+.|-.
T Consensus 345 ~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 345 RDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp TTSSEEEEEETTSEEEEEEC
T ss_pred CCCCeEEEEeCCCEEEEEEe
Confidence 334555667889999854
No 26
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=91.89 E-value=6.7 Score=35.05 Aligned_cols=196 Identities=13% Similarity=0.106 Sum_probs=97.0
Q ss_pred CCCeEEEEeCCc----ceE-EeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEee-------
Q 014875 66 LSSVSMLACGGA----HVL-ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA------- 133 (416)
Q Consensus 66 ~~~i~~ia~G~~----h~~-~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~------- 133 (416)
...|..++.... ..+ .-.. +|.|..|-.....+ .+..+......|..+..
T Consensus 65 ~~~v~~~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~s 126 (357)
T 3i2n_A 65 AKPIKCGTFGATSLQQRYLATGDF-----GGNLHIWNLEAPEM-------------PVYSVKGHKEIINAIDGIGGLGIG 126 (357)
T ss_dssp SSCEEEEECTTCCTTTCCEEEEET-----TSCEEEECTTSCSS-------------CSEEECCCSSCEEEEEEESGGGCC
T ss_pred cCcEEEEEEcCCCCCCceEEEecC-----CCeEEEEeCCCCCc-------------cEEEEEecccceEEEeeccccccC
Confidence 347777777654 333 3344 88999996543210 11112222244666532
Q ss_pred -cCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecC---CCceEEEEe-----CCCeEEEEEeccCCCeEEE
Q 014875 134 -GWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV---NKNVHQIAC-----GMRHSLVLLKDCLGNQVYG 204 (416)
Q Consensus 134 -G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~---~~~i~~i~~-----G~~hs~~lt~~~~~g~vy~ 204 (416)
...+.+.-..+|.|..|-...... ....+.... ...+..++. .....++.... +|.|+.
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~--d~~i~i 194 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDD----------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD--NGDIKL 194 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSS----------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET--TSEEEE
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCC----------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc--CCeEEE
Confidence 233555556789999996543210 011111111 124666652 22233333332 799999
Q ss_pred eCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecC-----CCeEEEEeCCCcEEEeeCCCCCCCCCCCc-eecCCC
Q 014875 205 FGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----GDRSAALSAEGHLYTWGRGFNSTSDVNCP-QSLPSS 278 (416)
Q Consensus 205 wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g-----~~~~~~lt~~G~vy~wG~~~~~~~~~~~p-~~~~~~ 278 (416)
|-.... .. ...... ...|..++.. ....++-..+|.|+.|-............ ......
T Consensus 195 ~d~~~~----------~~----~~~~~~-~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 259 (357)
T 3i2n_A 195 FDLRNM----------AL----RWETNI-KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK 259 (357)
T ss_dssp EETTTT----------EE----EEEEEC-SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS
T ss_pred EECccC----------ce----eeecCC-CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc
Confidence 953221 00 111111 2246666554 35556667899999996533221111000 001334
Q ss_pred CCeeEEEecCc---eEEEEecCCCEEEeeCC
Q 014875 279 LSFSQAALGWN---HVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 279 ~~i~~i~~g~~---~~~~lt~~g~vy~~G~n 306 (416)
..|..++.... ..+.-..||.|+.|-..
T Consensus 260 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 260 STVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 56777776544 34455678999999654
No 27
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.95 E-value=15 Score=37.26 Aligned_cols=61 Identities=15% Similarity=0.101 Sum_probs=32.5
Q ss_pred CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEe-------cCceE-EEEecC-CCEEEeeCC
Q 014875 243 NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL-------GWNHV-LVLTGD-GEVLMLGGS 306 (416)
Q Consensus 243 g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~-------g~~~~-~~lt~~-g~vy~~G~n 306 (416)
-..|++++..+|+||++|-..... . .-..-+.......+.. -..|+ +++..+ +++|.+|..
T Consensus 490 R~~h~~~~~~~~~iyv~GG~~~~~-~--v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 490 RFRHSACSLPDGNVLILGGVTEGP-A--MLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGG 559 (695)
T ss_dssp CBSCEEEECTTSCEEEECCBCSSC-S--EEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCB
T ss_pred cccceEEEEcCCEEEEECCCCCCC-C--EEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCc
Confidence 355777776689999998633222 1 0000012223333331 23455 454555 899999854
No 28
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.12 E-value=10 Score=33.93 Aligned_cols=159 Identities=11% Similarity=-0.018 Sum_probs=88.5
Q ss_pred eeEeeecCCCcccEEEEeecCc-----eEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC-
Q 014875 115 PKPVTFFDGHRYTITHISAGWN-----HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR- 188 (416)
Q Consensus 115 p~~v~~~~~~~~~i~~i~~G~~-----~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~- 188 (416)
...+..+......|..|+.... ..+.-..+|.|..|-....++ .....+.. ....|..++...+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------~~~~~~~~-h~~~v~~~~~~~~~ 98 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------TIPKAQQM-HTGPVLDVCWSDDG 98 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------EEEEEEEE-CSSCEEEEEECTTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------eeEEEecc-ccCCEEEEEECcCC
Confidence 3445555555567888887664 334446789999997543211 11112221 2345777776543
Q ss_pred -eEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEec--CCC--eEEEEeCCCcEEEeeCCC
Q 014875 189 -HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGD--RSAALSAEGHLYTWGRGF 263 (416)
Q Consensus 189 -hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~--g~~--~~~~lt~~G~vy~wG~~~ 263 (416)
..+.... +|.|..|-.... ... .+.. ....|..+.. ... ..+.-..+|.|+.|-...
T Consensus 99 ~~l~s~~~---dg~v~iwd~~~~----------~~~----~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 99 SKVFTASC---DKTAKMWDLSSN----------QAI----QIAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp SEEEEEET---TSEEEEEETTTT----------EEE----EEEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred CEEEEEcC---CCcEEEEEcCCC----------Cce----eecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 3333344 899999954321 111 1111 2235666664 333 345556789999995432
Q ss_pred CCCCCCCCceecCCCCCeeEEEecCceEEEEecCCCEEEeeCC
Q 014875 264 NSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 264 ~~~~~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n 306 (416)
... ...+.....+..+..-....++.+.++.++.|-..
T Consensus 161 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 198 (368)
T 3mmy_A 161 SNP-----MMVLQLPERCYCADVIYPMAVVATAERGLIVYQLE 198 (368)
T ss_dssp SSC-----SEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECS
T ss_pred CcE-----EEEEecCCCceEEEecCCeeEEEeCCCcEEEEEec
Confidence 211 12223344566666667778888889999998754
No 29
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=89.93 E-value=17 Score=36.37 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=37.8
Q ss_pred CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEe----cCCCeeEE-EECCCCEEEEEC
Q 014875 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIA----AGAEHSAV-VTENRAIMTWGW 362 (416)
Q Consensus 288 ~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~----~G~~h~~~-l~~~g~vy~wG~ 362 (416)
..|++++..+|+||..|-...+....+ ...........+ .......+. .-..|+.+ +..+|+||+.|.
T Consensus 457 ~~~~~~~l~~g~i~v~GG~~~~~~~~~-~~~~~~v~~ydp------~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 457 TFHTSVVLPDGSTFITGGQRRGIPFED-STPVFTPEIYVP------EQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCC-CSBCCCCEEEEG------GGTEEEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred ccCCeEECCCCCEEEECCcccCcCcCC-CCcccceEEEcC------CCCceeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 356777777899999997544321111 000001000000 011222221 23467654 568999999999
Q ss_pred CCCCC
Q 014875 363 GEHGQ 367 (416)
Q Consensus 363 n~~gq 367 (416)
+.++.
T Consensus 530 ~~~~~ 534 (656)
T 1k3i_A 530 GLCGD 534 (656)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 87653
No 30
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.92 E-value=12 Score=34.52 Aligned_cols=190 Identities=10% Similarity=0.046 Sum_probs=95.3
Q ss_pred CCCCeEEEEeCCc--ceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEE
Q 014875 65 SLSSVSMLACGGA--HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVS 142 (416)
Q Consensus 65 ~~~~i~~ia~G~~--h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt 142 (416)
....|..|+.... +.++-.. +|.|+.|-.... ..+..+......|..++......+.-.
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~-----dg~i~iwd~~~~--------------~~~~~~~~~~~~v~~~~~~~~~l~~~~ 193 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLG-----NGLVDIYDVESQ--------------TKLRTMAGHQARVGCLSWNRHVLSSGS 193 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEET-----TSCEEEEETTTC--------------CEEEEECCCSSCEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEECC-----CCeEEEEECcCC--------------eEEEEecCCCCceEEEEECCCEEEEEc
Confidence 3456777776433 3333344 788888864321 122223333356888877667677778
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCe-EEEEEeccCCCeEEEeCCCCCCCCCCCCCCcc
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH-SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~h-s~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~ 221 (416)
.+|.|+.|-....+. +..........|..++...+. .++.... +|.|+.|-.... .
T Consensus 194 ~dg~i~i~d~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~----------~ 250 (401)
T 4aez_A 194 RSGAIHHHDVRIANH-----------QIGTLQGHSSEVCGLAWRSDGLQLASGGN--DNVVQIWDARSS----------I 250 (401)
T ss_dssp TTSEEEEEETTSSSC-----------EEEEEECCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTCS----------S
T ss_pred CCCCEEEEecccCcc-----------eeeEEcCCCCCeeEEEEcCCCCEEEEEeC--CCeEEEccCCCC----------C
Confidence 899999997542111 111111122457777665332 2333222 799999954321 0
Q ss_pred eeecCeEecccCCCCEEEEecC--CCeEEEEe---CCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCce--EEEE
Q 014875 222 SVSLPQVTIGLHDIEIVGISAN--GDRSAALS---AEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNH--VLVL 294 (416)
Q Consensus 222 ~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt---~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~--~~~l 294 (416)
. ...+.. ....|..++.. ....++.. .+|.|+.|-..... ....+.....|..++..... .++.
T Consensus 251 ~---~~~~~~-~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 251 P---KFTKTN-HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA-----RVNTVDAGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp E---EEEECC-CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-----EEEEEECSSCEEEEEECSSSSEEEEE
T ss_pred c---cEEecC-CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-----EEEEEeCCCcEEEEEECCCCCeEEEE
Confidence 0 001111 12234444443 23344433 58999999653211 11222334556666654332 2222
Q ss_pred e--cCCCEEEeeC
Q 014875 295 T--GDGEVLMLGG 305 (416)
Q Consensus 295 t--~~g~vy~~G~ 305 (416)
. .+|.|+.|-.
T Consensus 322 ~g~~dg~i~v~~~ 334 (401)
T 4aez_A 322 HGFPDNNLSIWSY 334 (401)
T ss_dssp ECTTTCEEEEEEE
T ss_pred eecCCCcEEEEec
Confidence 2 5788888854
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.74 E-value=11 Score=33.74 Aligned_cols=215 Identities=12% Similarity=0.067 Sum_probs=99.8
Q ss_pred CCCeEEEEeCC-c--ceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeec---CCCcccEEEEeecC--ce
Q 014875 66 LSSVSMLACGG-A--HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFF---DGHRYTITHISAGW--NH 137 (416)
Q Consensus 66 ~~~i~~ia~G~-~--h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~---~~~~~~i~~i~~G~--~~ 137 (416)
...|..++... . ..+.-.. ||.|+.|-.... ..+..+ ......|..++... .+
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSK-----DHALRLWNIQTD--------------TLVAIFGGVEGHRDEVLSADYDLLGEK 175 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEET-----TSCEEEEETTTT--------------EEEEEECSTTSCSSCEEEEEECTTSSE
T ss_pred CCcEEEEEECCCCCCEEEEEeC-----CCeEEEEEeecC--------------eEEEEecccccccCceeEEEECCCCCE
Confidence 34788888754 2 3333345 899999965321 112221 22234577776543 34
Q ss_pred EEEEEeCCCEEEEcCCCCccccC-------CC--CCCcc------cc-eEeeecCCCceEEEEeCCCeEEEEEeccCCCe
Q 014875 138 SGFVSDSGCLFTCGDGTFGQLGH-------GD--YRSHS------SP-VKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQ 201 (416)
Q Consensus 138 ~~~lt~~G~v~~~G~n~~gqlG~-------~~--~~~~~------~p-~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~ 201 (416)
.+....+|.|+.|-......+.. .. ..... .| ..........|..++......+.-.. +|.
T Consensus 176 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---d~~ 252 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSC---ENA 252 (366)
T ss_dssp EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECS---SSE
T ss_pred EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEec---CCE
Confidence 55556789999997543211100 00 00000 00 00000122346666655455444455 899
Q ss_pred EEEeCCCCCCCCCCCCCCc-ceeecCeEecccCCCCEEEEe--cC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecC
Q 014875 202 VYGFGSGKRGQLGVSKDRI-RSVSLPQVTIGLHDIEIVGIS--AN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP 276 (416)
Q Consensus 202 vy~wG~n~~gqlG~~~~~~-~~~~~p~~~~~~~~~~i~~i~--~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~ 276 (416)
|..|-.....+.-...... ........+.. ....|..++ .. ..+.++-..+|.|+.|-......... ....+.
T Consensus 253 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~ 330 (366)
T 3k26_A 253 IVCWKPGKMEDDIDKIKPSESNVTILGRFDY-SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA-KCTTLT 330 (366)
T ss_dssp EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC-SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC-EEEEEC
T ss_pred EEEEeCCCccccccccccCCcchheeccccc-cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc-cceEEc
Confidence 9999654322211000000 00000011111 111222222 22 44556667899999997543221110 111222
Q ss_pred C---CCCeeEEEec--CceEEEEecCCCEEEee
Q 014875 277 S---SLSFSQAALG--WNHVLVLTGDGEVLMLG 304 (416)
Q Consensus 277 ~---~~~i~~i~~g--~~~~~~lt~~g~vy~~G 304 (416)
. ...|..++.. ....+.-+.||.|+.|-
T Consensus 331 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 331 HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 2 3567777664 33455556788888884
No 32
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=86.89 E-value=15 Score=32.17 Aligned_cols=17 Identities=12% Similarity=-0.050 Sum_probs=11.8
Q ss_pred CCeeEEEECCCCEEEEEC
Q 014875 345 AEHSAVVTENRAIMTWGW 362 (416)
Q Consensus 345 ~~h~~~l~~~g~vy~wG~ 362 (416)
..|++++. +++||+.|-
T Consensus 245 ~~~~~~~~-~~~i~v~GG 261 (301)
T 2vpj_A 245 CYVGATVL-RGRLYAIAG 261 (301)
T ss_dssp BSCEEEEE-TTEEEEECC
T ss_pred cceeEEEE-CCEEEEEcC
Confidence 35565554 789999985
No 33
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.40 E-value=16 Score=31.75 Aligned_cols=186 Identities=9% Similarity=-0.027 Sum_probs=97.9
Q ss_pred ccEEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEe---CCCeEEEEEeccCCCeE
Q 014875 126 YTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIAC---GMRHSLVLLKDCLGNQV 202 (416)
Q Consensus 126 ~~i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~---G~~hs~~lt~~~~~g~v 202 (416)
..|..++......+.-..+|.|+.|-. + .+..........+..++. .....+.... +|.|
T Consensus 105 ~~i~~~~~~~~~l~~~~~d~~i~~~d~---~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~i 167 (313)
T 3odt_A 105 GNVCSLSFQDGVVISGSWDKTAKVWKE---G-----------SLVYNLQAHNASVWDAKVVSFSENKFLTASA---DKTI 167 (313)
T ss_dssp SCEEEEEEETTEEEEEETTSEEEEEET---T-----------EEEEEEECCSSCEEEEEEEETTTTEEEEEET---TSCE
T ss_pred cCEEEEEecCCEEEEEeCCCCEEEEcC---C-----------cEEEecccCCCceeEEEEccCCCCEEEEEEC---CCCE
Confidence 567777776677777788999999941 1 111111112234655554 3344444455 8999
Q ss_pred EEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC-CeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCe
Q 014875 203 YGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG-DRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF 281 (416)
Q Consensus 203 y~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~-~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i 281 (416)
+.|-.. . ....+.......+..++... ...++-..+|.|+.|-......+ .........|
T Consensus 168 ~i~d~~----------~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~i 228 (313)
T 3odt_A 168 KLWQND----------K-----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL----RTYEGHESFV 228 (313)
T ss_dssp EEEETT----------E-----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE----EEEECCSSCE
T ss_pred EEEecC----------c-----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh----hhhhcCCceE
Confidence 999310 0 01111111223455554422 23556678999999965332111 1111234456
Q ss_pred eEEEecCc-eEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCC-eeEEEECCCCEEE
Q 014875 282 SQAALGWN-HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE-HSAVVTENRAIMT 359 (416)
Q Consensus 282 ~~i~~g~~-~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~-h~~~l~~~g~vy~ 359 (416)
..++.... ..++...+|.|+.|-..... ....+.. ....|..++...+ ..++...||.|+.
T Consensus 229 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~----------------~~~~~~~-~~~~i~~~~~~~~~~~~~~~~dg~i~i 291 (313)
T 3odt_A 229 YCIKLLPNGDIVSCGEDRTVRIWSKENGS----------------LKQVITL-PAISIWSVDCMSNGDIIVGSSDNLVRI 291 (313)
T ss_dssp EEEEECTTSCEEEEETTSEEEEECTTTCC----------------EEEEEEC-SSSCEEEEEECTTSCEEEEETTSCEEE
T ss_pred EEEEEecCCCEEEEecCCEEEEEECCCCc----------------eeEEEec-cCceEEEEEEccCCCEEEEeCCCcEEE
Confidence 67766433 56666788899999543210 0111111 1225666655433 3556678899999
Q ss_pred EECCC
Q 014875 360 WGWGE 364 (416)
Q Consensus 360 wG~n~ 364 (416)
|-...
T Consensus 292 w~~~~ 296 (313)
T 3odt_A 292 FSQEK 296 (313)
T ss_dssp EESCG
T ss_pred EeCCC
Confidence 97654
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=86.22 E-value=18 Score=32.34 Aligned_cols=196 Identities=11% Similarity=0.039 Sum_probs=98.3
Q ss_pred ccEEEEeecCc--eEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeec--CCCceEEEEeC----CCeEEEEEecc
Q 014875 126 YTITHISAGWN--HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF--VNKNVHQIACG----MRHSLVLLKDC 197 (416)
Q Consensus 126 ~~i~~i~~G~~--~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~--~~~~i~~i~~G----~~hs~~lt~~~ 197 (416)
..|..++.... +.+.-..+|.|+.|=... .....+..+ -...|..++.. ....+.-..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-- 77 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEG------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-- 77 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEET------------TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCC------------CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc--
Confidence 45666665433 333334688899885421 011112111 12457777764 233333344
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC----CeEEEEeCCCcEEEeeCCCCCCCCCCCce
Q 014875 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG----DRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273 (416)
Q Consensus 198 ~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~----~~~~~lt~~G~vy~wG~~~~~~~~~~~p~ 273 (416)
+|.|..|-.... . ..+..........|..++... ...++...+|.|..|-....... .+.
T Consensus 78 -dg~v~iwd~~~~----------~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~ 141 (379)
T 3jrp_A 78 -DGKVLIWKEENG----------R--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT---SPI 141 (379)
T ss_dssp -TSCEEEEEEETT----------E--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC---CEE
T ss_pred -CCEEEEEEcCCC----------c--eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce---eeE
Confidence 899999943210 0 001111111233566666543 45666788999999966433221 111
Q ss_pred ec-CCCCCeeEEEec---------------CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCc
Q 014875 274 SL-PSSLSFSQAALG---------------WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337 (416)
Q Consensus 274 ~~-~~~~~i~~i~~g---------------~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (416)
.+ .....|..++.. ....++-+.+|.|+.|-....... ......+.. ....
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------------~~~~~~~~~-h~~~ 208 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT------------YVLESTLEG-HSDW 208 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE------------EEEEEEECC-CSSC
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc------------eeeEEEEec-ccCc
Confidence 11 234456666554 345556677899999854311000 001111111 1235
Q ss_pred EEEEecCCC-----eeEEEECCCCEEEEECCC
Q 014875 338 VIQIAAGAE-----HSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 338 v~~i~~G~~-----h~~~l~~~g~vy~wG~n~ 364 (416)
|..++.... ..+....||.|..|-...
T Consensus 209 v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 209 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 666665533 444456789999997654
No 35
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=84.18 E-value=25 Score=32.18 Aligned_cols=159 Identities=15% Similarity=0.072 Sum_probs=80.1
Q ss_pred EEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec---CceEEEEEeCCCE
Q 014875 71 MLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG---WNHSGFVSDSGCL 147 (416)
Q Consensus 71 ~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G---~~~~~~lt~~G~v 147 (416)
.+++......++... ..+|.|+.|-....+.+. ..+..+......|..++.. ....+.-..||.|
T Consensus 39 ~~~~~~~~~~~~~~~--~~~g~i~v~~~~~~~~~~----------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v 106 (402)
T 2aq5_A 39 FCAVNPKFMALICEA--SGGGAFLVLPLGKTGRVD----------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTV 106 (402)
T ss_dssp SEEECSSEEEEEBCC--SSSCCEEEEETTCCEECC----------TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred cEEECCCeEEEEEEE--cCCCEEEEEECccCCCCC----------CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeE
Confidence 355555555544220 017999999876554331 1112222223457666653 3444455678999
Q ss_pred EEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCe--EEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeec
Q 014875 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH--SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSL 225 (416)
Q Consensus 148 ~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~h--s~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~ 225 (416)
..|-....+... ....+......-...|..++...+. .++.... +|.|+.|-.... . .
T Consensus 107 ~vw~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~----------~---~ 166 (402)
T 2aq5_A 107 MVWEIPDGGLVL-----PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--DNVILVWDVGTG----------A---A 166 (402)
T ss_dssp EEEECCTTCCSS-----CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET--TSCEEEEETTTT----------E---E
T ss_pred EEEEccCCCCcc-----ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC--CCEEEEEECCCC----------C---c
Confidence 999754422110 1112222221123467777766542 3333332 899999943221 0 0
Q ss_pred CeEec-ccCCCCEEEEecC--CCeEEEEeCCCcEEEeeC
Q 014875 226 PQVTI-GLHDIEIVGISAN--GDRSAALSAEGHLYTWGR 261 (416)
Q Consensus 226 p~~~~-~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~ 261 (416)
...+. ......|..++.. ....+.-..+|.|+.|-.
T Consensus 167 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 205 (402)
T 2aq5_A 167 VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEP 205 (402)
T ss_dssp EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEET
T ss_pred cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeC
Confidence 11110 1122346666553 345555668899999965
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=83.75 E-value=26 Score=32.09 Aligned_cols=188 Identities=10% Similarity=0.048 Sum_probs=97.6
Q ss_pred eEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec--CceEEEEEeCCC
Q 014875 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WNHSGFVSDSGC 146 (416)
Q Consensus 69 i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G--~~~~~~lt~~G~ 146 (416)
+..++-...+.++... ++.|+.|-....- ....+..... ..|..++-. ..+.++-..+|.
T Consensus 96 ~~~~~~s~~~l~~~~~-----d~~v~lw~~~~~~-----------~~~~~~~~~~--~~v~~v~~s~~~~~l~~~~~dg~ 157 (401)
T 4aez_A 96 LNLLDWSNLNVVAVAL-----ERNVYVWNADSGS-----------VSALAETDES--TYVASVKWSHDGSFLSVGLGNGL 157 (401)
T ss_dssp CBCEEECTTSEEEEEE-----TTEEEEEETTTCC-----------EEEEEECCTT--CCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEeecCCCEEEEEC-----CCeEEEeeCCCCc-----------EeEeeecCCC--CCEEEEEECCCCCEEEEECCCCe
Confidence 3346655667777777 9999999764311 1111111112 346666543 345555567899
Q ss_pred EEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecC
Q 014875 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLP 226 (416)
Q Consensus 147 v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p 226 (416)
|..|-...... ...+. .....|..++......+.-.. +|.|+.|-.....+ ..
T Consensus 158 i~iwd~~~~~~-----------~~~~~-~~~~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~------------~~ 210 (401)
T 4aez_A 158 VDIYDVESQTK-----------LRTMA-GHQARVGCLSWNRHVLSSGSR---SGAIHHHDVRIANH------------QI 210 (401)
T ss_dssp EEEEETTTCCE-----------EEEEC-CCSSCEEEEEEETTEEEEEET---TSEEEEEETTSSSC------------EE
T ss_pred EEEEECcCCeE-----------EEEec-CCCCceEEEEECCCEEEEEcC---CCCEEEEecccCcc------------ee
Confidence 99996433111 11111 123457777775544444455 89999995432110 01
Q ss_pred eEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecC--ceEEEEe---cCCC
Q 014875 227 QVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGW--NHVLVLT---GDGE 299 (416)
Q Consensus 227 ~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~--~~~~~lt---~~g~ 299 (416)
..+.. ....|..++.. ..+.+.-..+|.|+.|-..... ...........|..++... ...++.. .+|.
T Consensus 211 ~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 211 GTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI----PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp EEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS----EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred eEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC----ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence 11111 12346555543 3455556778999999653211 1111112344566666543 2334433 4888
Q ss_pred EEEeeCC
Q 014875 300 VLMLGGS 306 (416)
Q Consensus 300 vy~~G~n 306 (416)
|+.|-..
T Consensus 286 i~i~d~~ 292 (401)
T 4aez_A 286 IHFWNAA 292 (401)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 8888643
No 37
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=83.52 E-value=27 Score=31.99 Aligned_cols=115 Identities=12% Similarity=0.067 Sum_probs=58.9
Q ss_pred CCeEEEEeCC-c-ceEE-eeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCc---eEEE
Q 014875 67 SSVSMLACGG-A-HVLA-LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN---HSGF 140 (416)
Q Consensus 67 ~~i~~ia~G~-~-h~~~-lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~---~~~~ 140 (416)
..|..++... . ..++ -.. ||.|..|-....+... ....| +..+......|..|+.... ..+.
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~-----dg~v~vw~~~~~~~~~-----~~~~~--~~~~~~h~~~v~~~~~~p~~~~~l~s 149 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSE-----DCTVMVWEIPDGGLVL-----PLREP--VITLEGHTKRVGIVAWHPTAQNVLLS 149 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEET-----TSEEEEEECCTTCCSS-----CBCSC--SEEEECCSSCEEEEEECSSBTTEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeC-----CCeEEEEEccCCCCcc-----ccCCc--eEEecCCCCeEEEEEECcCCCCEEEE
Confidence 4788888754 3 2333 334 8999999765432211 01111 1222222245777766543 3444
Q ss_pred EEeCCCEEEEcCCCCccccCCCCCCcccceEee-ecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCC
Q 014875 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGS 207 (416)
Q Consensus 141 lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~-~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~ 207 (416)
-..+|.|+.|-...... ...+. ......|..++...+ ..+.-.. +|.|+.|-.
T Consensus 150 ~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~ 205 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAA-----------VLTLGPDVHPDTIYSVDWSRDGALICTSCR---DKRVRVIEP 205 (402)
T ss_dssp EETTSCEEEEETTTTEE-----------EEEECTTTCCSCEEEEEECTTSSCEEEEET---TSEEEEEET
T ss_pred EcCCCEEEEEECCCCCc-----------cEEEecCCCCCceEEEEECCCCCEEEEEec---CCcEEEEeC
Confidence 46789999996543111 01110 112245777766433 2233334 899999953
No 38
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=83.04 E-value=30 Score=32.25 Aligned_cols=240 Identities=11% Similarity=0.046 Sum_probs=124.0
Q ss_pred CCeEEEEeCCcceEE-eeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec----CceEEEE
Q 014875 67 SSVSMLACGGAHVLA-LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG----WNHSGFV 141 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~-lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G----~~~~~~l 141 (416)
..|..++......++ -.. ||.|..|-.... ..+..+......|..++.- ..+.+.-
T Consensus 163 ~~V~~l~~~~~~~l~s~s~-----dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 163 GGVWALKYAHGGILVSGST-----DRTVRVWDIKKG--------------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp SCEEEEEECSTTEEEEEET-----TSCEEEEETTTT--------------EEEEEECCCSSCEEEEEEEESSSCEEEEEE
T ss_pred cCEEEEEEcCCCEEEEEeC-----CCCEEEEECCCC--------------cEEEEECCCCCccEEEEEecCCCCCEEEEE
Confidence 477788765544333 334 899999965321 1222233223456555543 2445556
Q ss_pred EeCCCEEEEcCCCCccccCCCCCC---------cccceEeeec--CCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRS---------HSSPVKVSSF--VNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKR 210 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~---------~~~p~~v~~~--~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~ 210 (416)
..+|.|..|-.............. ...+..+..+ ....|..++......+.-.. +|.|+.|-....
T Consensus 224 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---d~~i~vwd~~~~ 300 (464)
T 3v7d_B 224 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY---DNTLIVWDVAQM 300 (464)
T ss_dssp ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEET---TSCEEEEETTTT
T ss_pred cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeC---CCeEEEEECCCC
Confidence 788999999765432221100000 0011111111 12346666655555555566 899999943211
Q ss_pred CCCCCCCCCcceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEec
Q 014875 211 GQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALG 287 (416)
Q Consensus 211 gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g 287 (416)
. ....+.. ....|..++.. ....+.-..+|.|+.|-..... ....+ .....|..+...
T Consensus 301 ----------~---~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 301 ----------K---CLYILSG-HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE-----LMYTLQGHTALVGLLRLS 361 (464)
T ss_dssp ----------E---EEEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEEC
T ss_pred ----------c---EEEEecC-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----EEEEEeCCCCcEEEEEEc
Confidence 0 0011111 12345555443 3466667789999999653211 01111 234567778877
Q ss_pred CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCC
Q 014875 288 WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 288 ~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~ 364 (416)
..+.+.-..||.|..|-.....+ ...........+..+..... .++...+|.|+.|=...
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSR----------------KFSYHHTNLSAITTFYVSDN-ILVSGSENQFNIYNLRS 421 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCE----------------EEEEECTTCCCEEEEEECSS-EEEEEETTEEEEEETTT
T ss_pred CCEEEEEeCCCcEEEEECCCCce----------------eeeecCCCCccEEEEEeCCC-EEEEecCCeEEEEECCC
Confidence 77888888999999997543110 11111112224445554444 44445588999997654
No 39
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=82.73 E-value=36 Score=32.92 Aligned_cols=148 Identities=13% Similarity=0.107 Sum_probs=73.4
Q ss_pred ccEEEEeecCc---eEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCC---ceEEEEeCCC---eEEEEEec
Q 014875 126 YTITHISAGWN---HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNK---NVHQIACGMR---HSLVLLKD 196 (416)
Q Consensus 126 ~~i~~i~~G~~---~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~---~i~~i~~G~~---hs~~lt~~ 196 (416)
..|..++.... ..+.-..+|.|..|-...... ...+.. ... .|..++...+ ..+....
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~-----------~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~- 227 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-----------SASDRT-HHKQGSFVRDVEFSPDSGEFVITVGS- 227 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE-----------EEEECS-SSCTTCCEEEEEECSTTCCEEEEEET-
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce-----------eeeecc-cCCCCceEEEEEECCCCCCEEEEEeC-
Confidence 34555554433 344456778888885322110 011111 112 5777776644 3333344
Q ss_pred cCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecc---cCCCCEEEEec-CCCeEEEEeCCCcEEEeeCCCCCCCCCCCc
Q 014875 197 CLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIG---LHDIEIVGISA-NGDRSAALSAEGHLYTWGRGFNSTSDVNCP 272 (416)
Q Consensus 197 ~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~---~~~~~i~~i~~-g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p 272 (416)
+|.|+.|-.... + ....+.. .....|..+.. ...+.+....+|.|..|-.......
T Consensus 228 --dg~i~vwd~~~~-~------------~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~----- 287 (615)
T 1pgu_A 228 --DRKISCFDGKSG-E------------FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV----- 287 (615)
T ss_dssp --TCCEEEEETTTC-C------------EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEE-----
T ss_pred --CCeEEEEECCCC-C------------EeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEE-----
Confidence 899999953221 0 0011101 12234655555 4445666677899999965321110
Q ss_pred eecCC-----CCCeeEEEe-cCceEEEEecCCCEEEeeCC
Q 014875 273 QSLPS-----SLSFSQAAL-GWNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 273 ~~~~~-----~~~i~~i~~-g~~~~~~lt~~g~vy~~G~n 306 (416)
..+.. ...+..+.. .....++.+.+|.++.|-..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 288 QKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp EEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 01111 123333333 55566777788999988643
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=82.27 E-value=28 Score=31.41 Aligned_cols=194 Identities=13% Similarity=0.066 Sum_probs=97.2
Q ss_pred CCeEEEEeCCcc--eEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC---ceEEEE
Q 014875 67 SSVSMLACGGAH--VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW---NHSGFV 141 (416)
Q Consensus 67 ~~i~~ia~G~~h--~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~---~~~~~l 141 (416)
..|..++..... .++.... ||.|..|-..... .............|..++... ...+.-
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK----GGDIILWDYDVQN------------KTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB----TSCEEEEETTSTT------------CEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEECCCCCCEEEEEcC----CCeEEEEeCCCcc------------cceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 467777765543 2332221 7888888654211 111111112224577776644 344455
Q ss_pred EeCCCEEEEcCCCCccccCCCCCCcccceEeeecC--CCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~~ 217 (416)
..+|.|..|-... .. ...+.... ...|..++...+ ..+.-.. +|.|+.|-.. ++
T Consensus 138 ~~d~~i~iwd~~~-~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~--~~----- 195 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SV-----------IQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLLLGLD--GH----- 195 (383)
T ss_dssp ETTTEEEEEETTS-CE-----------EEEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEEEETT--SC-----
T ss_pred eCCCEEEEEECCC-Cc-----------eEEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEEEECC--CC-----
Confidence 6789999996532 10 11111111 133555554433 3333334 7899999531 10
Q ss_pred CCcceeecCeEecccCCCCEEEEecCCC---eEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecC---ceE
Q 014875 218 DRIRSVSLPQVTIGLHDIEIVGISANGD---RSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGW---NHV 291 (416)
Q Consensus 218 ~~~~~~~~p~~~~~~~~~~i~~i~~g~~---~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~---~~~ 291 (416)
. ...+. .....|..++.... ..+.-..+|.|+.|-.......... ...+.....|..++... ...
T Consensus 196 -~------~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~l 266 (383)
T 3ei3_B 196 -E------IFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSY-IAEMPHEKPVNAAYFNPTDSTKL 266 (383)
T ss_dssp -E------EEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCE-EEEEECSSCEEEEEECTTTSCEE
T ss_pred -E------EEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccce-EEEecCCCceEEEEEcCCCCCEE
Confidence 0 01111 11235666655433 4555567899999966432211111 11123455677777644 455
Q ss_pred EEEecCCCEEEeeCCC
Q 014875 292 LVLTGDGEVLMLGGSH 307 (416)
Q Consensus 292 ~~lt~~g~vy~~G~n~ 307 (416)
+....||.|+.|-...
T Consensus 267 ~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 267 LTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EEEESSSEEEEEETTB
T ss_pred EEEcCCCcEEEEECCC
Confidence 5566788999997543
No 41
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=81.40 E-value=27 Score=30.62 Aligned_cols=18 Identities=33% Similarity=0.626 Sum_probs=12.4
Q ss_pred CceEEEEecCCCEEEeeCC
Q 014875 288 WNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 288 ~~~~~~lt~~g~vy~~G~n 306 (416)
..|++++. +++||.+|-.
T Consensus 192 ~~~~~~~~-~~~i~v~GG~ 209 (306)
T 3ii7_A 192 KNHGLVFV-KDKIFAVGGQ 209 (306)
T ss_dssp BSCEEEEE-TTEEEEECCE
T ss_pred hcceEEEE-CCEEEEEeCC
Confidence 35555555 7899999853
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=80.46 E-value=33 Score=30.98 Aligned_cols=188 Identities=12% Similarity=0.057 Sum_probs=95.9
Q ss_pred CCeEEEEeCCcceEEe--eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec---CceEEEE
Q 014875 67 SSVSMLACGGAHVLAL--TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG---WNHSGFV 141 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~l--t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G---~~~~~~l 141 (416)
..|..|+....-..++ .. |+.|..|-... ...+..+......|..|+.. ....+..
T Consensus 140 ~~V~~v~~spdg~~l~sgs~-----dg~v~iwd~~~--------------~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGK-----DFSVKVWDLSQ--------------KAVLKSYNAHSSEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp SCEEEEEECSSSSEEEEEET-----TSCEEEEETTT--------------TEEEEEECCCSSCEEEEEECTTCSSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEeC-----CCeEEEEECCC--------------CcEEEEEcCCCCCEEEEEEccCCCceeeee
Confidence 4677777654433333 34 78888885432 22333333333567777653 2334555
Q ss_pred EeCCCEEEEcCCCCccccCCCCCCcccceEeee-cCCCceEEEEeCC--CeEEEE-EeccCCCeEEEeCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGM--RHSLVL-LKDCLGNQVYGFGSGKRGQLGVSK 217 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~-~~~~~i~~i~~G~--~hs~~l-t~~~~~g~vy~wG~n~~gqlG~~~ 217 (416)
..||.|..|-......+. .+.. .....+..|+... .+.++. .. ++.|+.|-....
T Consensus 201 ~~dg~v~~wd~~~~~~~~-----------~~~~~~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~------- 259 (357)
T 4g56_B 201 GEDGRILLWDTRKPKPAT-----------RIDFCASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNP------- 259 (357)
T ss_dssp ETTSCEEECCTTSSSCBC-----------BCCCTTCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCG-------
T ss_pred ccCCceEEEECCCCceee-----------eeeeccccccccchhhhhcccceEEEeec---ccceeEEECCCC-------
Confidence 678999998532211100 0110 1123466666542 233443 34 789999843210
Q ss_pred CCcceeecCeEecccCCCCEEEEecC---CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec---CceE
Q 014875 218 DRIRSVSLPQVTIGLHDIEIVGISAN---GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG---WNHV 291 (416)
Q Consensus 218 ~~~~~~~~p~~~~~~~~~~i~~i~~g---~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g---~~~~ 291 (416)
.....+. .....|..++.. ..+.+.-..||.|++|-... ++ ....+.....|..|+.. ....
T Consensus 260 ------~~~~~~~-~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~----~~~~~~H~~~V~~vafsP~d~~~l 327 (357)
T 4g56_B 260 ------DSAQTSA-VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SE----VFRDLSHRDFVTGVAWSPLDHSKF 327 (357)
T ss_dssp ------GGCEEEC-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CE----EEEECCCSSCEEEEEECSSSTTEE
T ss_pred ------cEeEEEe-ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-Cc----EeEECCCCCCEEEEEEeCCCCCEE
Confidence 0111111 122356666653 23444567899999994321 11 11122234567777764 2233
Q ss_pred EEEecCCCEEEeeCC
Q 014875 292 LVLTGDGEVLMLGGS 306 (416)
Q Consensus 292 ~~lt~~g~vy~~G~n 306 (416)
+.-..||.|+.|=-.
T Consensus 328 ~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 328 TTVGWDHKVLHHHLP 342 (357)
T ss_dssp EEEETTSCEEEEECC
T ss_pred EEEcCCCeEEEEECC
Confidence 445678999999654
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=80.08 E-value=34 Score=30.89 Aligned_cols=170 Identities=12% Similarity=0.028 Sum_probs=85.4
Q ss_pred eecCCCcccEEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCccc-ceEeeecCCCceEEEEeCCC--------e
Q 014875 119 TFFDGHRYTITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSS-PVKVSSFVNKNVHQIACGMR--------H 189 (416)
Q Consensus 119 ~~~~~~~~~i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~-p~~v~~~~~~~i~~i~~G~~--------h 189 (416)
..+......|..|+......+.-..+|.|+.|-..... ...... ...+.. ....|..++...+ .
T Consensus 10 ~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~------~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLD------NENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp EESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCT------TCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcc------cccCCCcceEEec-CCCcEEEEEEecccccCCcccc
Confidence 34444556788888877666666789999999754321 001111 112221 2245776665443 3
Q ss_pred EEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccC----CCCEEEEecC------CCe-EEEEeCCCcEEE
Q 014875 190 SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLH----DIEIVGISAN------GDR-SAALSAEGHLYT 258 (416)
Q Consensus 190 s~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~----~~~i~~i~~g------~~~-~~~lt~~G~vy~ 258 (416)
.++.... +|.|+.|-...... ........+.... ...|..++.. ..+ .++-..+|.|+.
T Consensus 83 ~l~s~~~--dg~i~iw~~~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (397)
T 1sq9_A 83 LVATTSF--SGDLLFYRITREDE--------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYI 152 (397)
T ss_dssp EEEEEET--TSCEEEEEEEECTT--------TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEE
T ss_pred EEEEEcC--CCCEEEEEccCCcc--------cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEE
Confidence 3333332 78999984322100 0000011222221 2356666544 444 555678999999
Q ss_pred eeCCC------CCCCCCCCce-ec--------CCCCCeeEEEecCc-eEEEEecCCCEEEeeCC
Q 014875 259 WGRGF------NSTSDVNCPQ-SL--------PSSLSFSQAALGWN-HVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 259 wG~~~------~~~~~~~~p~-~~--------~~~~~i~~i~~g~~-~~~~lt~~g~vy~~G~n 306 (416)
|-... ...+. ..|. .+ .....|..++.... ..++-+.+|.|+.|-..
T Consensus 153 wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 153 WKFHPFADESNSLTLN-WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELS 215 (397)
T ss_dssp EEEESSSSHHHHTTTC-CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETT
T ss_pred EeCCccccccccceee-ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECC
Confidence 96644 22221 1111 11 12445666665433 44444567888888653
No 44
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=79.78 E-value=56 Score=33.18 Aligned_cols=196 Identities=11% Similarity=0.065 Sum_probs=98.6
Q ss_pred ccEEEEeecC--ceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecC--CCceEEEEeCC----CeEEEEEecc
Q 014875 126 YTITHISAGW--NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGM----RHSLVLLKDC 197 (416)
Q Consensus 126 ~~i~~i~~G~--~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~----~hs~~lt~~~ 197 (416)
..|..++... .+.+.-..+|.|.+|-... . ....+..+. ...|..++... ...+.-..
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~----------~--~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~-- 75 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEG----------E--THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-- 75 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEET----------T--EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET--
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCC----------C--CCccceeccCCcCceEEEEecCCCCCCEEEEEeC--
Confidence 4466665443 2334445788898885321 0 111111111 24577777642 23333344
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecC----CCeEEEEeCCCcEEEeeCCCCCCCCCCCce
Q 014875 198 LGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN----GDRSAALSAEGHLYTWGRGFNSTSDVNCPQ 273 (416)
Q Consensus 198 ~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g----~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~ 273 (416)
+|.|+.|-.... . ..+..........|..++.. ....+.-..+|.|+.|-........ ..
T Consensus 76 -Dg~I~vwd~~~~----------~--~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~---~~ 139 (753)
T 3jro_A 76 -DGKVLIWKEENG----------R--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS---PI 139 (753)
T ss_dssp -TSCEEEEEEETT----------E--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC---CE
T ss_pred -CCeEEEEECCCC----------c--ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc---ee
Confidence 899999943210 0 00111111123356666655 3466667889999999764332211 11
Q ss_pred ec-CCCCCeeEEEec---------------CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCc
Q 014875 274 SL-PSSLSFSQAALG---------------WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVK 337 (416)
Q Consensus 274 ~~-~~~~~i~~i~~g---------------~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (416)
.+ .....|..+... ....+.-..||.|+.|-....... ......+.. ....
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~------------~~~~~~~~~-h~~~ 206 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT------------YVLESTLEG-HSDW 206 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE------------EEEEEEECC-CSSC
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc------------ceeeeeecC-CCCc
Confidence 11 233456666553 344566677899999854321000 000111111 1235
Q ss_pred EEEEecCCC-----eeEEEECCCCEEEEECCC
Q 014875 338 VIQIAAGAE-----HSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 338 v~~i~~G~~-----h~~~l~~~g~vy~wG~n~ 364 (416)
|..++.... ..+.-..||.|+.|-...
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 666665533 344456789999997654
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=79.18 E-value=74 Score=34.24 Aligned_cols=190 Identities=9% Similarity=-0.069 Sum_probs=90.8
Q ss_pred cEEEEeecC-ceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC--eEEEEEeccCCCeEE
Q 014875 127 TITHISAGW-NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVY 203 (416)
Q Consensus 127 ~i~~i~~G~-~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy 203 (416)
.|..++... ...+....+|.|+.|-....- ....+.. ....|..++...+ ..+.-.. +|.|+
T Consensus 1046 ~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-----------~~~~~~~-~~~~v~~~~~s~d~~~l~s~s~---d~~v~ 1110 (1249)
T 3sfz_A 1046 TVKDFRLLQDSRLLSWSFDGTVKVWNVITGR-----------IERDFTC-HQGTVLSCAISSDATKFSSTSA---DKTAK 1110 (1249)
T ss_dssp CEEEEEECSSSEEEEEESSSEEEEEETTTTC-----------CCEEEEC-CSSCCCCEEECSSSSSCEEECC---SSCCC
T ss_pred cEEEEEEcCCCcEEEEECCCcEEEEECCCCc-----------eeEEEcc-cCCcEEEEEECCCCCEEEEEcC---CCcEE
Confidence 455554433 334555678889999653211 0111111 1223555544333 2233334 78888
Q ss_pred EeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC--CeEEEEeCCCcEEEeeCCCCCCCCCCCceec-----C
Q 014875 204 GFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG--DRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-----P 276 (416)
Q Consensus 204 ~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~--~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-----~ 276 (416)
.|-......+. .+. .....|..++... ...+.-..+|.|+.|-...........|... .
T Consensus 1111 iwd~~~~~~~~-------------~l~-~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 1176 (1249)
T 3sfz_A 1111 IWSFDLLSPLH-------------ELK-GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTAT 1176 (1249)
T ss_dssp EECSSSSSCSB-------------CCC-CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------
T ss_pred EEECCCcceee-------------eec-cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccc
Confidence 88543211110 011 1122455555433 3445556789999997644333322222111 2
Q ss_pred CCCCeeEEEecCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcE--EEEecCCCeeEEEECC
Q 014875 277 SSLSFSQAALGWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKV--IQIAAGAEHSAVVTEN 354 (416)
Q Consensus 277 ~~~~i~~i~~g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~G~~h~~~l~~~ 354 (416)
....|..++...+..++++.+|.|..|-......+..- .. ....| ..++......++...+
T Consensus 1177 ~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~g~~~~~~----------------~~-~~~~i~~~~~s~dg~~l~~~~~d 1239 (1249)
T 3sfz_A 1177 HGGWVTDVCFSPDSKTLVSAGGYLKWWNVATGDSSQTF----------------YT-NGTNLKKIHVSPDFRTYVTVDNL 1239 (1249)
T ss_dssp CCSCCCEEEECTTSSCEEEESSSEEEBCSSSCBCCCCC----------------CC-SSCCCCCCEECSSSCCEEEECTT
T ss_pred cCceEEEEEECCCCCEEEECCCeEEEEECCCCceeeee----------------ec-cCCcccEEEECCCCCEEEEecCC
Confidence 33457777766555555555688888864432211110 00 00112 2233344455667788
Q ss_pred CCEEEEEC
Q 014875 355 RAIMTWGW 362 (416)
Q Consensus 355 g~vy~wG~ 362 (416)
|.|+.|-.
T Consensus 1240 g~v~vw~l 1247 (1249)
T 3sfz_A 1240 GILYILQV 1247 (1249)
T ss_dssp CCEEEECC
T ss_pred cEEEEEee
Confidence 99999853
No 46
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=79.10 E-value=33 Score=30.15 Aligned_cols=203 Identities=9% Similarity=-0.024 Sum_probs=102.3
Q ss_pred CCeEEEEeCCcceE--EeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec--Cc-eEEEE
Q 014875 67 SSVSMLACGGAHVL--ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WN-HSGFV 141 (416)
Q Consensus 67 ~~i~~ia~G~~h~~--~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G--~~-~~~~l 141 (416)
..|..++......+ .-.. |+.|+.|-..... ....+...... ...|..++.. .. +.+.-
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~-----d~~v~iw~~~~~~--------~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSW-----DGSLTVYKFDIQA--------KNVDLLQSLRY---KHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEET-----TSEEEEEEEETTT--------TEEEEEEEEEC---SSCEEEEEEEESSSEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcC-----CCeEEEEEeCCCC--------ccccceeeeec---CCceEEEEECCCCCcEEEEE
Confidence 46777776544332 3334 8999999754321 01111222211 1346555543 34 55566
Q ss_pred EeCCCEEEEcC-CCCccccCCCCCCcccceEeeec-CCCceEEEEeC-CCeEEEEEeccCCCeEEEeCCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGD-GTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACG-MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218 (416)
Q Consensus 142 t~~G~v~~~G~-n~~gqlG~~~~~~~~~p~~v~~~-~~~~i~~i~~G-~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~ 218 (416)
..+|.|+.|-. .. +++ ..+... ....|..++.. ....+.... ++.|+.|-...... .
T Consensus 76 ~~dg~i~~wd~~~~-~~~-----------~~~~~~~~~~~v~~l~~~~~~~l~s~~~---d~~i~iwd~~~~~~---~-- 135 (342)
T 1yfq_A 76 TVQGEILKVDLIGS-PSF-----------QALTNNEANLGICRICKYGDDKLIAASW---DGLIEVIDPRNYGD---G-- 135 (342)
T ss_dssp ETTSCEEEECSSSS-SSE-----------EECBSCCCCSCEEEEEEETTTEEEEEET---TSEEEEECHHHHTT---B--
T ss_pred cCCCeEEEEEeccC-Cce-----------EeccccCCCCceEEEEeCCCCEEEEEcC---CCeEEEEccccccc---c--
Confidence 77899999964 22 111 122210 12356666654 333344444 89999994321000 0
Q ss_pred CcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec---CceEEEEe
Q 014875 219 RIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG---WNHVLVLT 295 (416)
Q Consensus 219 ~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g---~~~~~~lt 295 (416)
.......+..... ....|..++......++.+.+|.|+.|-........ ...........+..++.. ....++-+
T Consensus 136 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 136 VIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred cccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 0000000110101 223577777777777777889999999765411110 111122334456666664 34556667
Q ss_pred cCCCEEEeeCCC
Q 014875 296 GDGEVLMLGGSH 307 (416)
Q Consensus 296 ~~g~vy~~G~n~ 307 (416)
.+|.+..|-...
T Consensus 214 ~dg~i~i~~~~~ 225 (342)
T 1yfq_A 214 IDGRVAVEFFDD 225 (342)
T ss_dssp TTSEEEEEECCT
T ss_pred cCCcEEEEEEcC
Confidence 788888886543
No 47
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.72 E-value=34 Score=30.15 Aligned_cols=155 Identities=11% Similarity=-0.047 Sum_probs=75.8
Q ss_pred ccEEEEeecCce-EEEEEe-----CCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC----eEEEEEe
Q 014875 126 YTITHISAGWNH-SGFVSD-----SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR----HSLVLLK 195 (416)
Q Consensus 126 ~~i~~i~~G~~~-~~~lt~-----~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~----hs~~lt~ 195 (416)
..|..|+..... .++.+. +|.|+.|-..... ..+.... .....|..++...+ ..++...
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~----------~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD----------LKLLREI-EKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS----------EEEEEEE-EESSCEEEEECTTCCTTTCCEEEEE
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc----------ccceeee-cccCcEEEEEEcCCCCCCceEEEec
Confidence 467777765533 333333 7889988643210 1111111 11346888877654 3344333
Q ss_pred ccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEe--------cCCCeEEEEeCCCcEEEeeCCCCCC-
Q 014875 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGIS--------ANGDRSAALSAEGHLYTWGRGFNST- 266 (416)
Q Consensus 196 ~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~--------~g~~~~~~lt~~G~vy~wG~~~~~~- 266 (416)
. +|.|..|-.....+. ...+. .....|..+. ......+.-..+|.|+.|-......
T Consensus 88 ~--dg~i~iwd~~~~~~~------------~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~ 152 (357)
T 3i2n_A 88 F--GGNLHIWNLEAPEMP------------VYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDP 152 (357)
T ss_dssp T--TSCEEEECTTSCSSC------------SEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSC
T ss_pred C--CCeEEEEeCCCCCcc------------EEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCc
Confidence 2 899999954332100 01111 1122455552 2234556667899999996543221
Q ss_pred CCCCCceecCCCCCeeEEE------ecCceEEEEecCCCEEEeeCC
Q 014875 267 SDVNCPQSLPSSLSFSQAA------LGWNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 267 ~~~~~p~~~~~~~~i~~i~------~g~~~~~~lt~~g~vy~~G~n 306 (416)
.....+..-.....+..+. ......+.-..+|.|+.|-..
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (357)
T 3i2n_A 153 VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR 198 (357)
T ss_dssp SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT
T ss_pred ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc
Confidence 1000000001123566665 234455555677899998653
No 48
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=78.52 E-value=17 Score=33.82 Aligned_cols=98 Identities=11% Similarity=0.141 Sum_probs=54.9
Q ss_pred eEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEe
Q 014875 180 VHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259 (416)
Q Consensus 180 i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~w 259 (416)
|.+|++ ....+++.. ++.|..|=-....+. . ....+ ...+..+.+-....++++.+|.|++|
T Consensus 90 V~~l~f-d~~~L~v~~---~~~l~v~dv~sl~~~-----~--------~~~~~-~~~v~~i~~~~p~~av~~~dG~L~v~ 151 (388)
T 1xip_A 90 VIFVCF-HGDQVLVST---RNALYSLDLEELSEF-----R--------TVTSF-EKPVFQLKNVNNTLVILNSVNDLSAL 151 (388)
T ss_dssp EEEEEE-ETTEEEEEE---SSEEEEEESSSTTCE-----E--------EEEEC-SSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred eeEEEE-CCCEEEEEc---CCcEEEEEchhhhcc-----C--------cccee-ecceeeEEecCCCEEEEECCCCEEEE
Confidence 999999 777788887 899999954332111 0 01111 12355655555557778999999999
Q ss_pred eCCCCCCCCCCCceecCCCCCeeEEEecCceEEEEecCCCEEEe
Q 014875 260 GRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303 (416)
Q Consensus 260 G~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~ 303 (416)
-...... .. ....|..|+-...-.++...+|++..|
T Consensus 152 dl~~~~~------~~--~~~~Vs~v~WSpkG~~vg~~dg~i~~~ 187 (388)
T 1xip_A 152 DLRTKST------KQ--LAQNVTSFDVTNSQLAVLLKDRSFQSF 187 (388)
T ss_dssp ETTTCCE------EE--EEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred EccCCcc------cc--ccCCceEEEEcCCceEEEEcCCcEEEE
Confidence 5432111 11 122455554444444444555555544
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=78.35 E-value=34 Score=29.85 Aligned_cols=227 Identities=13% Similarity=0.067 Sum_probs=104.5
Q ss_pred CCeEEEEeCCcceEEe--eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceEEEEE
Q 014875 67 SSVSMLACGGAHVLAL--TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~l--t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~~~lt 142 (416)
..|..++......+++ .. |+.|..|-.... ..+..+......|..++... ...+.-.
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~-----d~~i~vwd~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASD-----DKTLKIWDVSSG--------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGS 126 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSEEEEEETTTC--------------CEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECC-----CCEEEEEECCCC--------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 3677777654433333 34 788999864321 11222222223455444433 3444456
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCe--EEEEEeccCCCeEEEeCCCCCCCCCCCCCCc
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH--SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~h--s~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~ 220 (416)
.+|.|..|-..... +..........|..++...+. .+.-.. +|.|..|-.... +
T Consensus 127 ~d~~i~iwd~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~-~-------- 182 (312)
T 4ery_A 127 FDESVRIWDVKTGK------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASG-Q-------- 182 (312)
T ss_dssp TTSCEEEEETTTCC------------EEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTC-C--------
T ss_pred CCCcEEEEECCCCE------------EEEEecCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEECCCC-c--------
Confidence 78889988643211 111111112346666654332 222333 788998843221 0
Q ss_pred ceeecCeEecccCCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCC----CCCee-EEE-ecCceEE
Q 014875 221 RSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPS----SLSFS-QAA-LGWNHVL 292 (416)
Q Consensus 221 ~~~~~p~~~~~~~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~----~~~i~-~i~-~g~~~~~ 292 (416)
. ...+.......+..++. ...+.++-..+|.|..|-......+ ..+.. ...+. ... .+....+
T Consensus 183 ---~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
T 4ery_A 183 ---C-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL-----KTYTGHKNEKYCIFANFSVTGGKWIV 253 (312)
T ss_dssp ---E-EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE-----EEECSSCCSSSCCCEEEECSSSCEEE
T ss_pred ---e-eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE-----EEEEecCCceEEEEEEEEeCCCcEEE
Confidence 0 01111111223444433 3446666778999999965322110 01100 01111 111 1233444
Q ss_pred EEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEE----CCCCEEEEEC
Q 014875 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVT----ENRAIMTWGW 362 (416)
Q Consensus 293 ~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~----~~g~vy~wG~ 362 (416)
.-..||.|+.|-..... ....+... ...|..++.-....++.+ .|+.|..|=.
T Consensus 254 sg~~dg~i~vwd~~~~~----------------~~~~~~~h-~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 254 SGSEDNLVYIWNLQTKE----------------IVQKLQGH-TDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp ECCTTSCEEEEETTTCC----------------EEEEECCC-SSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred EECCCCEEEEEECCCch----------------hhhhhhcc-CCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 45678899999653211 01111111 225666766554443332 4788888753
No 50
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=76.36 E-value=40 Score=29.65 Aligned_cols=17 Identities=18% Similarity=0.149 Sum_probs=12.0
Q ss_pred CCeeEEEECCCCEEEEEC
Q 014875 345 AEHSAVVTENRAIMTWGW 362 (416)
Q Consensus 345 ~~h~~~l~~~g~vy~wG~ 362 (416)
..|++++. +++||+.|-
T Consensus 207 ~~~~~~~~-~~~iyv~GG 223 (308)
T 1zgk_A 207 SGAGVCVL-HNCIYAAGG 223 (308)
T ss_dssp BSCEEEEE-TTEEEEECC
T ss_pred ccceEEEE-CCEEEEEeC
Confidence 45665555 789999984
No 51
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=73.57 E-value=52 Score=29.71 Aligned_cols=237 Identities=14% Similarity=0.094 Sum_probs=111.1
Q ss_pred CeEEEEeCCcceE--EeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec--CceEEEEEe
Q 014875 68 SVSMLACGGAHVL--ALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WNHSGFVSD 143 (416)
Q Consensus 68 ~i~~ia~G~~h~~--~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G--~~~~~~lt~ 143 (416)
.|..++......+ .-.. +|.|+.|- ..++ .+..+......|..++.. ..+.+....
T Consensus 110 ~v~~~~~s~~~~~l~~~~~-----dg~i~i~~--~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVE-----NGELRLWN--KTGA-------------LLNVLNFHRAPIVSVKWNKDGTHIISMDV 169 (425)
T ss_dssp CEEEEEECTTSSEEEEEET-----TSCEEEEE--TTSC-------------EEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEeC-----CCeEEEEe--CCCC-------------eeeeccCCCccEEEEEECCCCCEEEEEec
Confidence 6777776544333 3334 78899885 1111 122222222456666654 344555667
Q ss_pred CCCEEEEcCCCCccccCCCCCCcccceEee----ecCCCceEEEEeCCC-eEEEEEeccCCCeEEEeCCCCCCCCCCCCC
Q 014875 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVS----SFVNKNVHQIACGMR-HSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218 (416)
Q Consensus 144 ~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~----~~~~~~i~~i~~G~~-hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~ 218 (416)
+|.|+.|-......+..-..... ....+. ......+..++.... ..++... +|.|+.|-.....
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~i~~~d~~~~~------- 238 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKET-GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP---KGAIFVYQITEKT------- 238 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC----------------CCCBSCCEEEETTEEEEECG---GGCEEEEETTCSS-------
T ss_pred CCeEEEEECCCCcEEEEeecccc-CccceeeccccCCcceeeEEEEcCCCEEEEEcC---CCeEEEEEcCCCc-------
Confidence 89999997543221110000000 000000 000001333332222 2333334 7888888543210
Q ss_pred CcceeecCeEecccCCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEecCc-eEEEE
Q 014875 219 RIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALGWN-HVLVL 294 (416)
Q Consensus 219 ~~~~~~~p~~~~~~~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g~~-~~~~l 294 (416)
....+. .....|..++. .....+.-..+|.|+.|-...... ...+ .....|..+..... ..++.
T Consensus 239 ------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~~i~~~~~~~~~~l~~~ 306 (425)
T 1r5m_A 239 ------PTGKLI-GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS-----QNCFYGHSQSIVSASWVGDDKVISC 306 (425)
T ss_dssp ------CSEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC-----SEEECCCSSCEEEEEEETTTEEEEE
T ss_pred ------eeeeec-cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc-----ceEecCCCccEEEEEECCCCEEEEE
Confidence 011111 11224544443 344556667789999996432211 1111 23446666666433 55666
Q ss_pred ecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecC--CCeeEEEECCCCEEEEECCC
Q 014875 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG--AEHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 295 t~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G--~~h~~~l~~~g~vy~wG~n~ 364 (416)
..+|.|+.|-..... ....+.. ....|..++.. ....++-..+|.|+.|-...
T Consensus 307 ~~d~~i~i~d~~~~~----------------~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 307 SMDGSVRLWSLKQNT----------------LLALSIV-DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp ETTSEEEEEETTTTE----------------EEEEEEC-TTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred eCCCcEEEEECCCCc----------------EeEeccc-CCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 778899998643210 0111111 12245555544 34455556788999997643
No 52
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=72.87 E-value=48 Score=28.96 Aligned_cols=18 Identities=17% Similarity=0.052 Sum_probs=12.1
Q ss_pred CceEEEEecCCCEEEeeCC
Q 014875 288 WNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 288 ~~~~~~lt~~g~vy~~G~n 306 (416)
..|++++. +++||.+|-.
T Consensus 239 ~~~~~~~~-~~~i~v~GG~ 256 (306)
T 3ii7_A 239 VTVKCAAV-GSIVYVLAGF 256 (306)
T ss_dssp SCCEEEEE-TTEEEEEECB
T ss_pred cceeEEEE-CCEEEEEeCc
Confidence 34555554 7899999863
No 53
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=72.24 E-value=56 Score=29.47 Aligned_cols=163 Identities=7% Similarity=-0.015 Sum_probs=91.7
Q ss_pred EeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC-----CeEEEEeCCCcEEE
Q 014875 184 ACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG-----DRSAALSAEGHLYT 258 (416)
Q Consensus 184 ~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~-----~~~~~lt~~G~vy~ 258 (416)
+...++.+++|+ .|++|..-..+--..+.. ..-.+....+...++++|+.+.... .+.+.+|++|.+.-
T Consensus 50 ~~t~d~ll~fT~---~Gr~y~~~~~~lp~~~r~---~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr 123 (327)
T 3uc1_A 50 CSTHDLILFFTT---QGRVYRAKAYDLPEASRT---ARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKK 123 (327)
T ss_dssp EETTSEEEEEET---TSEEEEEEGGGSCBCCSS---SCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEE
T ss_pred eCCCCEEEEEeC---CCeEEEEEHHHCcCCCcc---CCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEE
Confidence 345566777888 999998754333222211 1112222333333566788776543 47888999999887
Q ss_pred eeCCCCCCCCCC--CceecCCCCCeeEE--EecCceEEEEecCCCEEEeeCC--CCCCCCCCCCCcccCccccceeeecc
Q 014875 259 WGRGFNSTSDVN--CPQSLPSSLSFSQA--ALGWNHVLVLTGDGEVLMLGGS--HHGMLSDPERVSSTRPLSVALEKVSN 332 (416)
Q Consensus 259 wG~~~~~~~~~~--~p~~~~~~~~i~~i--~~g~~~~~~lt~~g~vy~~G~n--~~gqlG~~~~~~~~~~~~~~~~~~~~ 332 (416)
.-...+...... .-..+..+..+..+ ..+..+.+++|+.|++|.+-.. +--.+|...... . -+..
T Consensus 124 ~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv-------~--~i~L 194 (327)
T 3uc1_A 124 SKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGV-------Q--GMRF 194 (327)
T ss_dssp EEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCE-------E--SSCC
T ss_pred eEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCe-------e--eecC
Confidence 654333221110 01122344555544 3467788999999999999877 544444432221 0 1112
Q ss_pred CCCCcEEEEecC--CCeeEEEECCCCEEEEE
Q 014875 333 LDGVKVIQIAAG--AEHSAVVTENRAIMTWG 361 (416)
Q Consensus 333 ~~~~~v~~i~~G--~~h~~~l~~~g~vy~wG 361 (416)
..+..|+.+..- ..+.+++|++|.+.-.=
T Consensus 195 ~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~ 225 (327)
T 3uc1_A 195 NIDDRLLSLNVVREGTYLLVATSGGYAKRTA 225 (327)
T ss_dssp CTTCCEEEEEECCTTCEEEEEETTSEEEEEE
T ss_pred CCCCEEEEEEEECCCCEEEEEeCCCcEEEEE
Confidence 234467766544 34577788888666544
No 54
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=71.15 E-value=59 Score=29.24 Aligned_cols=204 Identities=10% Similarity=-0.035 Sum_probs=96.8
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC---------ce
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW---------NH 137 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~---------~~ 137 (416)
..|..|+......+.-.. ||.|+.|-...... ......+..+......|..++-.. .+
T Consensus 17 ~~i~~~~~~~~~l~s~~~-----dg~i~iw~~~~~~~--------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 17 ADIFSVSACNSFTVSCSG-----DGYLKVWDNKLLDN--------ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp SCEEEEEECSSEEEEEET-----TSEEEEEESBCCTT--------CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred cCeEEEEecCCeEEEEcC-----CCEEEEEECCCccc--------ccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 478888876644444455 89999998643210 000111122222224566665443 34
Q ss_pred EEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecC----CCceEEEEeC----CC--e-EEEEEeccCCCeEEEeC
Q 014875 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV----NKNVHQIACG----MR--H-SLVLLKDCLGNQVYGFG 206 (416)
Q Consensus 138 ~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~----~~~i~~i~~G----~~--h-s~~lt~~~~~g~vy~wG 206 (416)
.+....+|.|+.|-..... .........+.... ...|..++.. .+ + .+.... +|.|+.|-
T Consensus 84 l~s~~~dg~i~iw~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---dg~i~iwd 154 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITRED------ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV---KGTTYIWK 154 (397)
T ss_dssp EEEEETTSCEEEEEEEECT------TTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET---TSCEEEEE
T ss_pred EEEEcCCCCEEEEEccCCc------ccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC---CCcEEEEe
Confidence 4444678999998643211 00000012222221 2457777665 22 3 233334 89999995
Q ss_pred CCC------CCCCCCCCCCcceeecCe-Eec------ccCCCCEEEEecCCC-eEEEEeCCCcEEEeeCCCCCCCCCCCc
Q 014875 207 SGK------RGQLGVSKDRIRSVSLPQ-VTI------GLHDIEIVGISANGD-RSAALSAEGHLYTWGRGFNSTSDVNCP 272 (416)
Q Consensus 207 ~n~------~gqlG~~~~~~~~~~~p~-~~~------~~~~~~i~~i~~g~~-~~~~lt~~G~vy~wG~~~~~~~~~~~p 272 (416)
... ...+- ..|. .+. ......|..++.... ..++-..+|.|+.|-..... ..
T Consensus 155 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~ 220 (397)
T 1sq9_A 155 FHPFADESNSLTLN---------WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR-----PL 220 (397)
T ss_dssp EESSSSHHHHTTTC---------CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE-----EE
T ss_pred CCccccccccceee---------ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc-----ee
Confidence 433 11110 0111 111 111223444444332 44455678899999653211 11
Q ss_pred eecCC-------CCCeeEEEec--CceEEEEecC---CCEEEeeCC
Q 014875 273 QSLPS-------SLSFSQAALG--WNHVLVLTGD---GEVLMLGGS 306 (416)
Q Consensus 273 ~~~~~-------~~~i~~i~~g--~~~~~~lt~~---g~vy~~G~n 306 (416)
..+.. ...|..++.. ....++-..+ |.|+.|-..
T Consensus 221 ~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 221 YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred EEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 11222 4566666653 3344455566 788888654
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=70.85 E-value=92 Score=31.39 Aligned_cols=190 Identities=12% Similarity=-0.013 Sum_probs=93.2
Q ss_pred CCeEEEEeCCcc--eEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCc--eEEEEE
Q 014875 67 SSVSMLACGGAH--VLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--HSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h--~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~--~~~~lt 142 (416)
..|..++..... .+.-.. +|.|+.|-..... .+..+......|..++.... +.+.-.
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~-----dg~i~vw~~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 116 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSD-----DFRIRVFNYNTGE--------------KVVDFEAHPDYIRSIAVHPTKPYVLSGS 116 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEET-----TSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCc--------------EEEEEecCCCCEEEEEEeCCCCEEEEEc
Confidence 356666654333 333344 8999999754321 11112222234666655433 344456
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCC--CeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCc
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGM--RHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~--~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~ 220 (416)
.+|.|..|-..... ............|..++... ...++.... +|.|+.|-.....
T Consensus 117 ~dg~i~vw~~~~~~-----------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~~~--------- 174 (814)
T 3mkq_A 117 DDLTVKLWNWENNW-----------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQST--------- 174 (814)
T ss_dssp TTSEEEEEEGGGTS-----------EEEEEEECCSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCSS---------
T ss_pred CCCEEEEEECCCCc-----------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCc---------
Confidence 77888888642210 11111111224577777654 223333332 8999999542210
Q ss_pred ceeecCeEeccc--CCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEecC--ceEEE
Q 014875 221 RSVSLPQVTIGL--HDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALGW--NHVLV 293 (416)
Q Consensus 221 ~~~~~p~~~~~~--~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g~--~~~~~ 293 (416)
....+... .......... .....++-..+|.|+.|-..... ....+ .....|..++... ...+.
T Consensus 175 ----~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 175 ----PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS-----CVATLEGHMSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp ----CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE-----EEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred ----ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----EEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 01111111 1222333333 34456666788999999543211 11111 2334566665543 34555
Q ss_pred EecCCCEEEeeCC
Q 014875 294 LTGDGEVLMLGGS 306 (416)
Q Consensus 294 lt~~g~vy~~G~n 306 (416)
.+.+|.|+.|-..
T Consensus 246 ~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 246 GSEDGTLKIWNSS 258 (814)
T ss_dssp EETTSCEEEEETT
T ss_pred EeCCCeEEEEECC
Confidence 5678999999654
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=70.81 E-value=52 Score=28.54 Aligned_cols=197 Identities=8% Similarity=0.051 Sum_probs=95.2
Q ss_pred EeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCc-eEEEEEeCCCEEEEc
Q 014875 73 ACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCLFTCG 151 (416)
Q Consensus 73 a~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~-~~~~lt~~G~v~~~G 151 (416)
..+.-..+++.. ||++++.+......+..... .. ..++.... ....|..++.... ..++...+|.|..|-
T Consensus 8 ~~~~v~~~~~s~-----dg~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~dg~i~iw~ 78 (337)
T 1gxr_A 8 GSKPAYSFHVTA-----DGQMQPVPFPPDALIGPGIP-RH--ARQINTLN-HGEVVCAVTISNPTRHVYTGGKGCVKVWD 78 (337)
T ss_dssp EEEECCEEEECS-----SSCEEECCCCTTSSSSTTCC-SE--EEEEEEEC-CSSCCCEEEECSSSSEEEEECBSEEEEEE
T ss_pred cCCceeEEEECC-----CCCEEEeecCCCcEeccccC-Cc--cccceecc-CCCceEEEEEecCCcEEEEcCCCeEEEEE
Confidence 344556678888 89998888654433222111 11 11222221 2234555554332 233334488888886
Q ss_pred CCCCccccCCCCCCcccceEeee-cCCCceEEEEeCCCe--EEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeE
Q 014875 152 DGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACGMRH--SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQV 228 (416)
Q Consensus 152 ~n~~gqlG~~~~~~~~~p~~v~~-~~~~~i~~i~~G~~h--s~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~ 228 (416)
...... ......+.. .....|..++...+. .++-.. +|.|+.|-.... .. .....
T Consensus 79 ~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~----------~~-~~~~~ 136 (337)
T 1gxr_A 79 ISHPGN--------KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLSIWDLAAP----------TP-RIKAE 136 (337)
T ss_dssp TTSTTC--------CSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEEEEECCCC-------------EEEEE
T ss_pred CCCCCc--------eeeeecccccCCCCcEEEEEEcCCCCEEEEEcC---CCcEEEEECCCC----------Cc-ceeee
Confidence 543211 001111110 122457666665433 233334 799999943221 00 00011
Q ss_pred ecccCCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecC-CCCCeeEEEec--CceEEEEecCCCEEEe
Q 014875 229 TIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP-SSLSFSQAALG--WNHVLVLTGDGEVLML 303 (416)
Q Consensus 229 ~~~~~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~-~~~~i~~i~~g--~~~~~~lt~~g~vy~~ 303 (416)
+. .....|..++. ...+.++-..+|.|+.|-..... ....+. ....|..++.. ....+..+.+|.|+.|
T Consensus 137 ~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~ 210 (337)
T 1gxr_A 137 LT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-----LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSW 210 (337)
T ss_dssp EE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-----eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 11 11224555544 34455666788999999653211 111121 34456666664 3355555678889988
Q ss_pred eCC
Q 014875 304 GGS 306 (416)
Q Consensus 304 G~n 306 (416)
-..
T Consensus 211 d~~ 213 (337)
T 1gxr_A 211 DLR 213 (337)
T ss_dssp ETT
T ss_pred ECC
Confidence 643
No 57
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=70.24 E-value=60 Score=28.99 Aligned_cols=216 Identities=11% Similarity=0.064 Sum_probs=113.7
Q ss_pred CceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEE--EEeCCCeEEEEEeccCCCeEEEeCCCCCCC
Q 014875 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQ--IACGMRHSLVLLKDCLGNQVYGFGSGKRGQ 212 (416)
Q Consensus 135 ~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~--i~~G~~hs~~lt~~~~~g~vy~wG~n~~gq 212 (416)
....+++|.+|.|--.-...+.....+. .-...+..-.+..+.. ++...++.+++|+ .|.+|..-..+.-.
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~----~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~---~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGG----KGLSSFDLNDGDEIVIALCVNTHDYLFMISN---EGKLYLINAYEIKD 80 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSC----CCEECCCCCTTCCEEEEEEEETTCEEEEEET---TSEEEEEEGGGSCC
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCC----CCceecccCCCCEEEEEEEECCCCEEEEEEC---CCeEEEEEHHHCCC
Confidence 3457788999987654332221111000 0001111112334444 4456677888899 99999885443222
Q ss_pred CCCCCCCcceeecCeEecccCCCCEEEEecC-----CCeEEEEeCCCcEEEeeCCCCCC---CCCCCceecCCCCCeeEE
Q 014875 213 LGVSKDRIRSVSLPQVTIGLHDIEIVGISAN-----GDRSAALSAEGHLYTWGRGFNST---SDVNCPQSLPSSLSFSQA 284 (416)
Q Consensus 213 lG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g-----~~~~~~lt~~G~vy~wG~~~~~~---~~~~~p~~~~~~~~i~~i 284 (416)
.+.. ..-.+....+...++..|+.+... ..+.+++|++|.++-.-...+.. .+... ..+..+..++.+
T Consensus 81 ~~r~---~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~-i~L~~~d~lv~~ 156 (312)
T 1suu_A 81 SSRA---SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV-IKLNDKDFVTSA 156 (312)
T ss_dssp ----------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC-BCCCTTCCEEEE
T ss_pred CCcc---CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE-EecCCCCEEEEE
Confidence 2221 111112223333345567776553 45688899999999876544321 11111 123345566665
Q ss_pred Ee--cCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEec--CCCeeEEEECCCCEEEE
Q 014875 285 AL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTENRAIMTW 360 (416)
Q Consensus 285 ~~--g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--G~~h~~~l~~~g~vy~w 360 (416)
.. +..+.+++|++|.++.+-..+.-..|...... ....+. .+..|+.+.. ...+.++++++|.+...
T Consensus 157 ~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv-------~~i~L~--~~d~vv~~~~v~~~~~l~~vt~~G~~kr~ 227 (312)
T 1suu_A 157 EIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGV-------CGMKLK--EGDLFVKVLSVKENPYLLIVSENGYGKRL 227 (312)
T ss_dssp EEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCE-------ECCCCC--TTCCEEEEEECTTCSEEEEEETTSEEEEE
T ss_pred EEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCe-------EeEEeC--CCCEEEEEEEECCCCeEEEEECCCceEEE
Confidence 44 46678899999999998776654444422211 111111 2334555432 34567888999987777
Q ss_pred ECCCCCCccC
Q 014875 361 GWGEHGQLGL 370 (416)
Q Consensus 361 G~n~~gqLG~ 370 (416)
-..++-..+.
T Consensus 228 ~~~e~~~~~R 237 (312)
T 1suu_A 228 NMSKISELKR 237 (312)
T ss_dssp EGGGSCBCCT
T ss_pred EHHHhcccCC
Confidence 7666544443
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=69.00 E-value=68 Score=29.12 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=39.8
Q ss_pred CCEEEEecCCC---eEEEEeCCCcEEEeeCCCCCCCCCCCceec--CCCCCeeEEEecCceEEE-EecCCCEEEeeCCC
Q 014875 235 IEIVGISANGD---RSAALSAEGHLYTWGRGFNSTSDVNCPQSL--PSSLSFSQAALGWNHVLV-LTGDGEVLMLGGSH 307 (416)
Q Consensus 235 ~~i~~i~~g~~---~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~--~~~~~i~~i~~g~~~~~~-lt~~g~vy~~G~n~ 307 (416)
..|..++.... ..++-..+|.|+.|-....... ...+ .....|..+.......++ -..||.|..|-...
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP----VGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC----SEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc----hhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 35666665443 5666678899999965432210 1111 134456666665544443 34678899986543
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=67.54 E-value=90 Score=29.98 Aligned_cols=110 Identities=9% Similarity=-0.042 Sum_probs=60.3
Q ss_pred CEEEEecCCCeEEEEeC-CCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEec--CceEEEEecCCCEEEeeCCCCCCC
Q 014875 236 EIVGISANGDRSAALSA-EGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALG--WNHVLVLTGDGEVLMLGGSHHGML 311 (416)
Q Consensus 236 ~i~~i~~g~~~~~~lt~-~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g--~~~~~~lt~~g~vy~~G~n~~gql 311 (416)
.+..++......++-.. +|.|+.|-...... .+..+ .....|..++.. ..+.+.-+.+|.|+.|-......+
T Consensus 448 ~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 523 (615)
T 1pgu_A 448 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEV----SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK 523 (615)
T ss_dssp CEEEEEECSSEEEEEETTTSCEEEEETTEEEE----EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CceEEEEcCCEEEEeecCCCeEEEEECCCccc----cccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce
Confidence 45555555555555666 89999996532110 00111 234467666663 445555667899999965421111
Q ss_pred CCCCCCcccCccccceeeeccCCCCcEEEEecC------------CCeeEEEECCCCEEEEECCCC
Q 014875 312 SDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG------------AEHSAVVTENRAIMTWGWGEH 365 (416)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G------------~~h~~~l~~~g~vy~wG~n~~ 365 (416)
..+.......|..++.. ....+.-..||.|+.|-....
T Consensus 524 ----------------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 524 ----------------TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp ----------------ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred ----------------eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 11111012356666553 344445567899999987654
No 60
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=66.33 E-value=62 Score=27.69 Aligned_cols=228 Identities=11% Similarity=0.029 Sum_probs=114.3
Q ss_pred CCeEEEEeCCcceEE-eeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEee--cCceEEEEEe
Q 014875 67 SSVSMLACGGAHVLA-LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA--GWNHSGFVSD 143 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~-lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~--G~~~~~~lt~ 143 (416)
..|..|+.-....++ -.. ||.|+.|-.... .....+.... ..|..++. ...+.+.-..
T Consensus 19 ~~v~~~~~~~~~~l~s~~~-----dg~v~vw~~~~~-----------~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 19 QDVRDVVAVDDSKVASVSR-----DGTVRLWSKDDQ-----------WLGTVVYTGQ---GFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp SCEEEEEEEETTEEEEEET-----TSEEEEEEESSS-----------EEEEEEEECS---SCEEEEEEETTTTEEEEEET
T ss_pred CCcEEEEecCCCEEEEEEc-----CCcEEEEECCCC-----------EEEEEeecCC---ccEEEEEECCCCCEEEEecC
Confidence 467777763232333 334 899999975321 1111111111 34555443 3344555567
Q ss_pred CCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCccee
Q 014875 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSV 223 (416)
Q Consensus 144 ~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~ 223 (416)
+|.|..|-..... ...+..........|..++.-....+.-.. +|.|+.|-. + .
T Consensus 80 dg~i~~~~~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~---d~~i~~~d~---~-------~---- 133 (313)
T 3odt_A 80 DTMINGVPLFATS---------GEDPLYTLIGHQGNVCSLSFQDGVVISGSW---DKTAKVWKE---G-------S---- 133 (313)
T ss_dssp TSCEEEEETTCCT---------TSCC-CEECCCSSCEEEEEEETTEEEEEET---TSEEEEEET---T-------E----
T ss_pred CCeEEEEEeeecC---------CCCcccchhhcccCEEEEEecCCEEEEEeC---CCCEEEEcC---C-------c----
Confidence 7888877543210 001111111122457777775555555555 899999930 0 0
Q ss_pred ecCeEecccCCCCEEEEec---CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEec-CceEEEEecCC
Q 014875 224 SLPQVTIGLHDIEIVGISA---NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALG-WNHVLVLTGDG 298 (416)
Q Consensus 224 ~~p~~~~~~~~~~i~~i~~---g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g-~~~~~~lt~~g 298 (416)
. ...+. .....+..+.. .....++-..+|.|+.|-.. ....... .....+..++.. ....++...+|
T Consensus 134 ~-~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg 205 (313)
T 3odt_A 134 L-VYNLQ-AHNASVWDAKVVSFSENKFLTASADKTIKLWQND------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDG 205 (313)
T ss_dssp E-EEEEE-CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT------EEEEEECSSCSSCEEEEEEEETTEEEEEETTS
T ss_pred E-EEecc-cCCCceeEEEEccCCCCEEEEEECCCCEEEEecC------ceEEEEeccCcccEEEEEEcCCCeEEEccCCC
Confidence 0 00111 11224444433 45667777889999999521 0111111 134456666553 22356667888
Q ss_pred CEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCC-eeEEEECCCCEEEEECCC
Q 014875 299 EVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE-HSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 299 ~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~-h~~~l~~~g~vy~wG~n~ 364 (416)
.|+.|-...... ...+.. ....|..++...+ ..++...||.|+.|-...
T Consensus 206 ~i~i~d~~~~~~----------------~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 206 LIKLVDMHTGDV----------------LRTYEG-HESFVYCIKLLPNGDIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp EEEEEETTTCCE----------------EEEEEC-CSSCEEEEEECTTSCEEEEETTSEEEEECTTT
T ss_pred eEEEEECCchhh----------------hhhhhc-CCceEEEEEEecCCCEEEEecCCEEEEEECCC
Confidence 999996542110 111111 1225666655433 455567889999997543
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=66.24 E-value=83 Score=29.11 Aligned_cols=242 Identities=10% Similarity=-0.005 Sum_probs=125.4
Q ss_pred eEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCc-eEEEEEeCCCE
Q 014875 69 VSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN-HSGFVSDSGCL 147 (416)
Q Consensus 69 i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~-~~~~lt~~G~v 147 (416)
+..++......+.-.. ||.|..|-... .+.+..+......|..++.... ..+.-..||.|
T Consensus 125 ~~~~~~~~~~l~sgs~-----dg~i~vwd~~~--------------~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i 185 (464)
T 3v7d_B 125 ITCLQFEDNYVITGAD-----DKMIRVYDSIN--------------KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV 185 (464)
T ss_dssp EEEEEEETTEEEEEET-----TSCEEEEETTT--------------TEEEEEECCCSSCEEEEEECSTTEEEEEETTSCE
T ss_pred EEEEEECCCEEEEEcC-----CCcEEEEECCC--------------CcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCE
Confidence 4455554554444556 89999996432 1233333344456777776543 44555688999
Q ss_pred EEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeC---CCeEEEEEeccCCCeEEEeCCCCCCCCCCCCC---Ccc
Q 014875 148 FTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG---MRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD---RIR 221 (416)
Q Consensus 148 ~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~---~~~ 221 (416)
..|-...... ...+.. ....|..++.. ....++.... +|.|..|-............ ...
T Consensus 186 ~vwd~~~~~~-----------~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 186 RVWDIKKGCC-----------THVFEG-HNSTVRCLDIVEYKNIKYIVTGSR--DNTLHVWKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp EEEETTTTEE-----------EEEECC-CSSCEEEEEEEESSSCEEEEEEET--TSCEEEEECCCCCCC------CCSSE
T ss_pred EEEECCCCcE-----------EEEECC-CCCccEEEEEecCCCCCEEEEEcC--CCcEEEeeCCCCcccccccccCCcce
Confidence 9996532111 011111 12346555543 2233333332 89999996543322211000 000
Q ss_pred eee----cC--eEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEec--CceEE
Q 014875 222 SVS----LP--QVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALG--WNHVL 292 (416)
Q Consensus 222 ~~~----~p--~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g--~~~~~ 292 (416)
... .+ ..........+..+.......+.-..+|.|+.|-...... ...+ .....|..++.. ....+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~ 326 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC-----LYILSGHTDRIYSTIYDHERKRCI 326 (464)
T ss_dssp EESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEE-----EEEECCCSSCEEEEEEETTTTEEE
T ss_pred EeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----EEEecCCCCCEEEEEEcCCCCEEE
Confidence 000 00 0111112235667766677777788899999996532111 1111 224456666654 33556
Q ss_pred EEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCCC
Q 014875 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGEH 365 (416)
Q Consensus 293 ~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~~ 365 (416)
.-+.||.|+.|-..... ....+.. ....|..++....+.+.-..||.|..|-.+..
T Consensus 327 sg~~dg~i~vwd~~~~~----------------~~~~~~~-h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 327 SASMDTTIRIWDLENGE----------------LMYTLQG-HTALVGLLRLSDKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp EEETTSCEEEEETTTTE----------------EEEEECC-CSSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred EEeCCCcEEEEECCCCc----------------EEEEEeC-CCCcEEEEEEcCCEEEEEeCCCcEEEEECCCC
Confidence 66778889998643210 0111111 22356677776777777788999999977653
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=65.34 E-value=78 Score=28.48 Aligned_cols=138 Identities=15% Similarity=0.116 Sum_probs=69.3
Q ss_pred ceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCC
Q 014875 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQL 213 (416)
Q Consensus 136 ~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gql 213 (416)
...++...+|.|+.|-..... ....+. .....|..++...+ ..+.-.. +|.|+.|-.....
T Consensus 218 ~~~~~~~~~g~i~~~d~~~~~-----------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-- 280 (425)
T 1r5m_A 218 DKFVIPGPKGAIFVYQITEKT-----------PTGKLI-GHHGPISVLEFNDTNKLLLSASD---DGTLRIWHGGNGN-- 280 (425)
T ss_dssp TEEEEECGGGCEEEEETTCSS-----------CSEEEC-CCSSCEEEEEEETTTTEEEEEET---TSCEEEECSSSBS--
T ss_pred CEEEEEcCCCeEEEEEcCCCc-----------eeeeec-cCCCceEEEEECCCCCEEEEEcC---CCEEEEEECCCCc--
Confidence 334555678888888654311 011111 11234666655432 3333334 7899999533210
Q ss_pred CCCCCCcceeecCeEecccCCCCEEEEecCCC-eEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec--Cce
Q 014875 214 GVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-RSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG--WNH 290 (416)
Q Consensus 214 G~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~-~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g--~~~ 290 (416)
....+.. ....|..++.... ..++...+|.|+.|-...... ..........|..++.. ...
T Consensus 281 -----------~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 281 -----------SQNCFYG-HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTL----LALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp -----------CSEEECC-CSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEE----EEEEECTTCCEEEEEECTTSSE
T ss_pred -----------cceEecC-CCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcE----eEecccCCccEEEEEEcCCCCE
Confidence 1111111 1234555554333 566667899999996532111 01111224456666654 344
Q ss_pred EEEEecCCCEEEeeCC
Q 014875 291 VLVLTGDGEVLMLGGS 306 (416)
Q Consensus 291 ~~~lt~~g~vy~~G~n 306 (416)
.++-+.+|.|+.|-..
T Consensus 345 l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEETTSCEEEEECH
T ss_pred EEEEECCCeEEEEECC
Confidence 5555678888888653
No 63
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=64.29 E-value=74 Score=27.82 Aligned_cols=17 Identities=18% Similarity=0.133 Sum_probs=11.9
Q ss_pred CCeeEEEECCCCEEEEEC
Q 014875 345 AEHSAVVTENRAIMTWGW 362 (416)
Q Consensus 345 ~~h~~~l~~~g~vy~wG~ 362 (416)
..|++++. +++||+.|-
T Consensus 254 ~~~~~~~~-~~~i~v~GG 270 (308)
T 1zgk_A 254 SALGITVH-QGRIYVLGG 270 (308)
T ss_dssp BSCEEEEE-TTEEEEECC
T ss_pred cceEEEEE-CCEEEEEcC
Confidence 35565554 689999985
No 64
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=64.23 E-value=72 Score=27.69 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=11.1
Q ss_pred ceEEEEEeCCCEEEEcC
Q 014875 136 NHSGFVSDSGCLFTCGD 152 (416)
Q Consensus 136 ~~~~~lt~~G~v~~~G~ 152 (416)
.|++++. +++||++|-
T Consensus 101 ~~~~~~~-~~~iyv~GG 116 (302)
T 2xn4_A 101 TLGAAVL-NGLLYAVGG 116 (302)
T ss_dssp SCEEEEE-TTEEEEEEE
T ss_pred ceEEEEE-CCEEEEEcC
Confidence 4555554 689999983
No 65
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=63.76 E-value=82 Score=28.19 Aligned_cols=188 Identities=13% Similarity=0.032 Sum_probs=92.5
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCc---eEEEEEe
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN---HSGFVSD 143 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~---~~~~lt~ 143 (416)
..|..|+....-..+++-+. |+.|..|-... .+.+..+......|..++.... ..+.-..
T Consensus 128 ~~V~~v~~spdg~~l~sgs~---d~~i~iwd~~~--------------~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~ 190 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSK---DICIKVWDLAQ--------------QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSE 190 (344)
T ss_dssp SCEEEEEECTTSSEEEEEET---TSCEEEEETTT--------------TEEEEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCEEEEEECCCCCEEEEEeC---CCeEEEEECCC--------------CcEEEEEcCcCCceEEEEecCCCCCceeeecc
Confidence 46777776544333333211 78888885422 2334444444456777766433 2233457
Q ss_pred CCCEEEEcCCCCccccCCCCCCcccceEee-ecCCCceEEEEeCC--CeEEEE-EeccCCCeEEEeCCCCCCCCCCCCCC
Q 014875 144 SGCLFTCGDGTFGQLGHGDYRSHSSPVKVS-SFVNKNVHQIACGM--RHSLVL-LKDCLGNQVYGFGSGKRGQLGVSKDR 219 (416)
Q Consensus 144 ~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~-~~~~~~i~~i~~G~--~hs~~l-t~~~~~g~vy~wG~n~~gqlG~~~~~ 219 (416)
||.|..|-......+ ..+. ......+..++... .+.++. .. +|.|..|=... ++
T Consensus 191 D~~v~iwd~~~~~~~-----------~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~-~~------- 248 (344)
T 4gqb_B 191 DNRILLWDTRCPKPA-----------SQIGCSAPGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKS-TS------- 248 (344)
T ss_dssp TSCEEEEETTSSSCE-----------EECC----CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC----------
T ss_pred cccccccccccccee-----------eeeecceeeccceeeeecCCCCcceEEecc---CCcEEEEECCC-Cc-------
Confidence 899999953221100 0111 11122355555432 233333 34 79999993221 11
Q ss_pred cceeecCeEecccCCCCEEEEecCC---CeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEecC-ce-EEE
Q 014875 220 IRSVSLPQVTIGLHDIEIVGISANG---DRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALGW-NH-VLV 293 (416)
Q Consensus 220 ~~~~~~p~~~~~~~~~~i~~i~~g~---~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g~-~~-~~~ 293 (416)
....+.. ....|..++... .+.+.-..||.|++|-... ++ ...+ .....|..++... .. .++
T Consensus 249 -----~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-~~-----~~~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 249 -----CVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-SE-----LFRSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp -----CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC-CE-----EEEECCCSSCEEEEEECSSSTTEEE
T ss_pred -----EEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-Cc-----EEEEcCCCCCEEEEEEeCCCCeEEE
Confidence 0111111 223567776543 3444567899999994321 11 1111 2344677777642 22 232
Q ss_pred -EecCCCEEEeeC
Q 014875 294 -LTGDGEVLMLGG 305 (416)
Q Consensus 294 -lt~~g~vy~~G~ 305 (416)
-..||.|..|--
T Consensus 317 s~s~D~~v~~w~v 329 (344)
T 4gqb_B 317 TVGWDHQVVHHVV 329 (344)
T ss_dssp EEETTSCEEEEEC
T ss_pred EEcCCCeEEEEEC
Confidence 357899999854
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=63.65 E-value=79 Score=27.92 Aligned_cols=242 Identities=8% Similarity=-0.017 Sum_probs=112.5
Q ss_pred CCeEEEEeCCcce-EEee-CCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec--CceEEEEE
Q 014875 67 SSVSMLACGGAHV-LALT-SPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WNHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~-~~lt-~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G--~~~~~~lt 142 (416)
..|..++...... ++.. . ++.|+.|-.... ....+..+......|..++.. ....+...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPN-----NHEVHIYEKSGN------------KWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp SCCCEEEECTTSSEEEEECS-----SSEEEEEEEETT------------EEEEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeC-----CCEEEEEeCCCC------------cEEeeeeecCCCCcccEEEEeCCCCEEEEEc
Confidence 4666777654433 3333 4 889999864321 011222232223456666554 33445556
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCe-EEEEEeccCCCeEEEeCCCCCCCCCCCCCCcc
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH-SLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~h-s~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~ 221 (416)
.+|.|..|-.... + ..+..........|..++...+. .++.... +|.|+.|-.....
T Consensus 72 ~dg~i~vwd~~~~-~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~d~~~~~---------- 129 (372)
T 1k8k_C 72 TDRNAYVWTLKGR-T---------WKPTLVILRINRAARCVRWAPNEKKFAVGSG--SRVISICYFEQEN---------- 129 (372)
T ss_dssp TTSCEEEEEEETT-E---------EEEEEECCCCSSCEEEEEECTTSSEEEEEET--TSSEEEEEEETTT----------
T ss_pred CCCeEEEEECCCC-e---------eeeeEEeecCCCceeEEEECCCCCEEEEEeC--CCEEEEEEecCCC----------
Confidence 7888888854221 0 01111111112356666654332 2333322 7888888432210
Q ss_pred eeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCC------------CCCCcee-c-CCCCCeeEEE
Q 014875 222 SVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTS------------DVNCPQS-L-PSSLSFSQAA 285 (416)
Q Consensus 222 ~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~------------~~~~p~~-~-~~~~~i~~i~ 285 (416)
.......+.......|..++.. ....++-..+|.|+.|-....... ....+.. + .....|..+.
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence 0001111111112356666553 335555678999999974211100 0011111 1 1233566665
Q ss_pred ec--CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecC-CCeeEEEECCCCEEEEEC
Q 014875 286 LG--WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG-AEHSAVVTENRAIMTWGW 362 (416)
Q Consensus 286 ~g--~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G-~~h~~~l~~~g~vy~wG~ 362 (416)
.. ....+....+|.|+.|-..... ....+.. ....|..++.. ....++...+|.++.|-.
T Consensus 210 ~~~~~~~l~~~~~d~~i~i~d~~~~~----------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~ 272 (372)
T 1k8k_C 210 FSANGSRVAWVSHDSTVCLADADKKM----------------AVATLAS-ETLPLLAVTFITESSLVAAGHDCFPVLFTY 272 (372)
T ss_dssp ECSSSSEEEEEETTTEEEEEEGGGTT----------------EEEEEEC-SSCCEEEEEEEETTEEEEEETTSSCEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCc----------------eeEEEcc-CCCCeEEEEEecCCCEEEEEeCCeEEEEEc
Confidence 53 3345555677888888543210 0111111 11245544433 334555667888888876
Q ss_pred CC
Q 014875 363 GE 364 (416)
Q Consensus 363 n~ 364 (416)
..
T Consensus 273 ~~ 274 (372)
T 1k8k_C 273 DS 274 (372)
T ss_dssp ET
T ss_pred cC
Confidence 54
No 67
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=61.57 E-value=83 Score=27.49 Aligned_cols=213 Identities=11% Similarity=0.058 Sum_probs=115.8
Q ss_pred CCeEEEEeC--CcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec---CceEEEE
Q 014875 67 SSVSMLACG--GAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG---WNHSGFV 141 (416)
Q Consensus 67 ~~i~~ia~G--~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G---~~~~~~l 141 (416)
..+..+... ..+.+++|+ +|++|.--... |-.. ... -+ ..++ .+|+.+.+- ..+.+++
T Consensus 24 D~~~~~~~~~t~~~ll~fT~-----~G~v~~~~~~~---lp~~---~~~---~l-l~~~--e~i~~v~~~~~~~~~~v~~ 86 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSN-----RGRVYWIAGSQ---ALQG---SKV---SL-KSRE--EKIVGAFIREKFGNRLLLA 86 (276)
T ss_dssp CCEEEEEEEETTSCEEEEET-----TSEEEEECSHH---HHTS---EEC---CC-SSTT--CCEEEEEEGGGSCSEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcC-----CCeEEEEEhhh---CccC---ccc---cc-CCCC--CEEEEEECCcCCCCEEEEE
Confidence 355555443 345788999 99999865321 1000 000 02 2233 678877662 2568889
Q ss_pred EeCCCEEEEcCCCCccccCCCCCCcccceE-eeecCCCceEEEEe--CCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVK-VSSFVNKNVHQIAC--GMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKD 218 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~~~~p~~-v~~~~~~~i~~i~~--G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~ 218 (416)
|++|.+.-.-...+-+ ...... +....+..++.+.. +.++.+++|+ +|++|.+-..+.-.+|....
T Consensus 87 T~~G~iKr~~l~~~~~--------~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~---~G~~~r~~~~eip~~gR~a~ 155 (276)
T 3no0_A 87 TKKGYVKKIPLAEFEY--------KAQGMPIIKLTEGDEVVSIASSVDETHILLFTK---KGRVARFSVREVPPSTPGAR 155 (276)
T ss_dssp ETTSEEEEEEGGGTTT--------CSTTEECSCCCTTCCEEEEEECCSSCEEEEEET---TSEEEEEEGGGSCBCCTTCC
T ss_pred eCCCEEEEEEHHHhhh--------hcCCeEEEecCCCCEEEEEEEeCCCCEEEEEEC---CCEEEEEEhhhCCCcCCCCC
Confidence 9999888665433321 011111 22223345555443 4556888888 99999987666555554321
Q ss_pred CcceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCC--ceecCCCCCeeEEE--ecCceEE
Q 014875 219 RIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNC--PQSLPSSLSFSQAA--LGWNHVL 292 (416)
Q Consensus 219 ~~~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~--p~~~~~~~~i~~i~--~g~~~~~ 292 (416)
... .+...++.+|+.+... ..+.+++|++|.+.-.-...+....... -..+....++..+. .+....+
T Consensus 156 Gv~------~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~ 229 (276)
T 3no0_A 156 GVQ------GIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELL 229 (276)
T ss_dssp CEE------CCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEE
T ss_pred CEE------EEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEE
Confidence 111 1111234466665432 4477888999988776554332211110 01113344555543 3566788
Q ss_pred EEecCCCEEE--eeCCCCCCCCC
Q 014875 293 VLTGDGEVLM--LGGSHHGMLSD 313 (416)
Q Consensus 293 ~lt~~g~vy~--~G~n~~gqlG~ 313 (416)
+++++|++.. +-..+.-.+|.
T Consensus 230 ~~t~~G~~ir~~~~~~~i~~~~R 252 (276)
T 3no0_A 230 ITTKNGKAFYDKINQKDIPLSTK 252 (276)
T ss_dssp EEETTSCEEEEEEEGGGSCBCCT
T ss_pred EEcCCCeEEEeeeCHHHCCCcCC
Confidence 9999999988 76655444443
No 68
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=61.14 E-value=83 Score=27.37 Aligned_cols=204 Identities=10% Similarity=0.003 Sum_probs=98.6
Q ss_pred CCeEEEEeCCc---ceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec-CceEEEEE
Q 014875 67 SSVSMLACGGA---HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-WNHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~---h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G-~~~~~~lt 142 (416)
..|..++.... ..+.-.. +|.|+.|-....+++ ..+... .....|..++.. ....+...
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~-----dg~i~~wd~~~~~~~-----------~~~~~~-~~~~~v~~l~~~~~~~l~s~~ 119 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTV-----QGEILKVDLIGSPSF-----------QALTNN-EANLGICRICKYGDDKLIAAS 119 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEET-----TSCEEEECSSSSSSE-----------EECBSC-CCCSCEEEEEEETTTEEEEEE
T ss_pred CceEEEEECCCCCcEEEEEcC-----CCeEEEEEeccCCce-----------Eecccc-CCCCceEEEEeCCCCEEEEEc
Confidence 46777665432 3344445 889999864122211 111110 022346555544 45556667
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcce
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRS 222 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~ 222 (416)
.+|.|+.|-...+.. ........+..... ....|..++...+..++.+. ++.|+.|-....+..
T Consensus 120 ~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~--------- 183 (342)
T 1yfq_A 120 WDGLIEVIDPRNYGD---GVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMN---NSQVQWFRLPLCEDD--------- 183 (342)
T ss_dssp TTSEEEEECHHHHTT---BCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEES---TTEEEEEESSCCTTC---------
T ss_pred CCCeEEEEccccccc---ccccccCCeeeEEe-eCCceEEEEecCCcEEEEeC---CCeEEEEECCccccc---------
Confidence 889999995321000 00000000000001 12457788877777444555 899999964331110
Q ss_pred eecCeEecccCCCCEEEEecCC---CeEEEEeCCCcEEEeeCCCCCCCCCCCcee-cC-C---------CCCeeEEEec-
Q 014875 223 VSLPQVTIGLHDIEIVGISANG---DRSAALSAEGHLYTWGRGFNSTSDVNCPQS-LP-S---------SLSFSQAALG- 287 (416)
Q Consensus 223 ~~~p~~~~~~~~~~i~~i~~g~---~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~-~~-~---------~~~i~~i~~g- 287 (416)
............+..++... ...++-..+|.+..|-....+......+.. +. . ...|..++..
T Consensus 184 --~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 261 (342)
T 1yfq_A 184 --NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp --CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT
T ss_pred --cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC
Confidence 01111111122455555543 455666789999998664431110001111 11 1 1256666653
Q ss_pred -CceEEEEecCCCEEEeeC
Q 014875 288 -WNHVLVLTGDGEVLMLGG 305 (416)
Q Consensus 288 -~~~~~~lt~~g~vy~~G~ 305 (416)
....+.-+.+|.|+.|-.
T Consensus 262 ~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 262 RHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp TTCCEEEEETTSCEEEEET
T ss_pred CCCEEEEecCCceEEEEcC
Confidence 334555567888888854
No 69
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=58.63 E-value=94 Score=27.20 Aligned_cols=197 Identities=11% Similarity=0.037 Sum_probs=94.5
Q ss_pred CCeEEEEeCCcceEEe--eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec--CceEEEEE
Q 014875 67 SSVSMLACGGAHVLAL--TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG--WNHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~l--t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G--~~~~~~lt 142 (416)
..|..++......+++ .. ||.|+.|-.... ..+..+......|..++.. ..+.+...
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~-----dg~i~vwd~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSK-----DSSASVWYSLNG--------------ERLGTLDGHTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp SCEEEEEECTTSCEEEEEES-----SSCEEEEETTTC--------------CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeC-----CCEEEEEeCCCc--------------hhhhhhhhcCCcEEEEEEcCCCCEEEEEe
Confidence 3677777654433333 34 788999964321 1222233333456666654 34555556
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeE--EEEEeccCC-----CeEEEeCCCCCCCCCC
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS--LVLLKDCLG-----NQVYGFGSGKRGQLGV 215 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs--~~lt~~~~~-----g~vy~wG~n~~gqlG~ 215 (416)
.+|.|+.|-......+ ..+. ....|..++...+.. ++... + |.|+.|-.........
T Consensus 94 ~dg~i~iwd~~~~~~~-----------~~~~--~~~~v~~~~~~~~~~~l~~~~~---~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCV-----------ATWK--SPVPVKRVEFSPCGNYFLAILD---NVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp TTTEEEEEETTTCCEE-----------EEEE--CSSCEEEEEECTTSSEEEEEEC---CBTTBCCEEEEEEEEECTTTCC
T ss_pred CCCeEEEEECCCCcEE-----------EEee--cCCCeEEEEEccCCCEEEEecC---CccCCCCEEEEEEecCCcccee
Confidence 7899999964321110 1111 224566666544332 22233 5 8888885433221110
Q ss_pred CCCCcceeecC-eEeccc-CCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEec--C
Q 014875 216 SKDRIRSVSLP-QVTIGL-HDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALG--W 288 (416)
Q Consensus 216 ~~~~~~~~~~p-~~~~~~-~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g--~ 288 (416)
. ......+ ..+... ....+..++. .....++-..+|.|+.|-.....+ ....+ .....|..++.. .
T Consensus 158 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 158 L---TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE----YVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp E---EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTE----EEEEEECCSSCEEEEEECTTS
T ss_pred e---cccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE----eEEEEecCCCceeEEEECCCC
Confidence 0 0000001 111111 1113444433 334556667889999996533111 01111 234456666654 3
Q ss_pred ceEEEEecCCCEEEeeC
Q 014875 289 NHVLVLTGDGEVLMLGG 305 (416)
Q Consensus 289 ~~~~~lt~~g~vy~~G~ 305 (416)
...+..+.+|.|+.|-.
T Consensus 231 ~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDV 247 (369)
T ss_dssp SEEEEEETTSEEEEEET
T ss_pred CEEEEecCCceEEEEEC
Confidence 34455567788888854
No 70
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=57.29 E-value=1.2e+02 Score=27.92 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=100.4
Q ss_pred CeEEEEeCCc---ceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec---CceEEEE
Q 014875 68 SVSMLACGGA---HVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG---WNHSGFV 141 (416)
Q Consensus 68 ~i~~ia~G~~---h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G---~~~~~~l 141 (416)
.|..|+.... +.+.-.. +|.|+.|-.+...... ....+. ..+......|..|+.. ....+..
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~-----dg~i~vwd~~~~~~~~-----~~~~~~--~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASD-----DHTICLWDINATPKEH-----RVIDAK--NIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCCEEECTTSTTEEEEECT-----TSCEEEEETTSCCBGG-----GEEECS--EEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CeEEEEeCCCCCCeEEEEeC-----CCeEEEEeCCCCCCCC-----ceeccc--eeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 5556665433 2233334 8999999876432111 111111 1122222457777663 3444455
Q ss_pred EeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCCCCC
Q 014875 142 SDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDR 219 (416)
Q Consensus 142 t~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~ 219 (416)
..+|.|+.|-...... ..+..........|..|+.... +.++.... +|.|..|-.....+
T Consensus 251 ~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~------- 312 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNT---------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKL------- 312 (430)
T ss_dssp ETTSEEEEEETTCSCS---------SSCSEEEECCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTS-------
T ss_pred eCCCeEEEEECCCCCC---------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCC-------
Confidence 6789999997543210 1111111112345777776543 33444332 89999996433211
Q ss_pred cceeecCeEecccCCCCEEEEecCC---CeEEEEeCCCcEEEeeCCCCCCCCC--------CCceecC--CCCCeeEEEe
Q 014875 220 IRSVSLPQVTIGLHDIEIVGISANG---DRSAALSAEGHLYTWGRGFNSTSDV--------NCPQSLP--SSLSFSQAAL 286 (416)
Q Consensus 220 ~~~~~~p~~~~~~~~~~i~~i~~g~---~~~~~lt~~G~vy~wG~~~~~~~~~--------~~p~~~~--~~~~i~~i~~ 286 (416)
|..........|..++... ...+.-..+|.|.+|-....+.... ....... ....|..++.
T Consensus 313 ------~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 386 (430)
T 2xyi_A 313 ------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386 (430)
T ss_dssp ------CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE
T ss_pred ------CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE
Confidence 1111111223566666543 2345556789999997654332110 1111111 2345777766
Q ss_pred cCc---eEEEEecCCCEEEeeCC
Q 014875 287 GWN---HVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 287 g~~---~~~~lt~~g~vy~~G~n 306 (416)
... ..+....+|.|..|-..
T Consensus 387 ~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 387 NPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCCCEEEEEECCCCEEEeEcc
Confidence 533 45556678888888643
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=57.16 E-value=1.2e+02 Score=27.80 Aligned_cols=65 Identities=18% Similarity=0.071 Sum_probs=36.2
Q ss_pred CeEEEEeCCcceEE--eeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCceEEEEEeCC
Q 014875 68 SVSMLACGGAHVLA--LTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNHSGFVSDSG 145 (416)
Q Consensus 68 ~i~~ia~G~~h~~~--lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~~~~lt~~G 145 (416)
.|..|+......++ -.. ||.|..|-.... +.+..+......+..++......+.-..++
T Consensus 149 ~V~sv~fspdg~~lasgs~-----Dg~v~iWd~~~~--------------~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTS-----SAEVQLWDVQQQ--------------KRLRNMTSHSARVGSLSWNSYILSSGSRSG 209 (420)
T ss_dssp CEEEEEECTTSSEEEEEET-----TSCEEEEETTTT--------------EEEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCCCEEEEEEC-----CCeEEEEEcCCC--------------cEEEEEeCCCCceEEEeeCCCEEEEEeCCC
Confidence 57777765433322 234 788888864321 223333333355666666555555556677
Q ss_pred CEEEEc
Q 014875 146 CLFTCG 151 (416)
Q Consensus 146 ~v~~~G 151 (416)
.++.|-
T Consensus 210 ~i~~~d 215 (420)
T 4gga_A 210 HIHHHD 215 (420)
T ss_dssp EEEEEE
T ss_pred ceeEee
Confidence 777774
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=55.60 E-value=1.2e+02 Score=27.33 Aligned_cols=245 Identities=11% Similarity=0.057 Sum_probs=116.6
Q ss_pred CCCeEEEEeCCcceEEe--eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec---CceEEE
Q 014875 66 LSSVSMLACGGAHVLAL--TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG---WNHSGF 140 (416)
Q Consensus 66 ~~~i~~ia~G~~h~~~l--t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G---~~~~~~ 140 (416)
...|..++......+++ .. ||.|..|-...... ....+..+......|..++.. ....+.
T Consensus 67 ~~~v~~~~~s~~~~~l~~~~~-----dg~v~vw~~~~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 131 (416)
T 2pm9_A 67 DSKFNDLDWSHNNKIIAGALD-----NGSLELYSTNEANN----------AINSMARFSNHSSSVKTVKFNAKQDNVLAS 131 (416)
T ss_dssp SSCEEEEEECSSSSCEEEEES-----SSCEEEECCSSTTS----------CCCEEEECCCSSSCCCEEEECSSSTTBEEE
T ss_pred CCceEEEEECCCCCeEEEEcc-----CCeEEEeecccccc----------cccchhhccCCccceEEEEEcCCCCCEEEE
Confidence 34777777654433322 34 78999996543110 011222333333446555553 344555
Q ss_pred EEeCCCEEEEcCCCCccccCCCCCCcccceEee--ecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCC
Q 014875 141 VSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVS--SFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVS 216 (416)
Q Consensus 141 lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~--~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~ 216 (416)
-..+|.|+.|-........ ....+..+. ......|..++...+ +.++.... +|.|+.|-....
T Consensus 132 ~~~dg~v~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~------ 198 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESP-----SNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS--SNFASIWDLKAK------ 198 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCT-----TTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS--SSCEEEEETTTT------
T ss_pred EcCCCeEEEEECCCCcccc-----ccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC--CCCEEEEECCCC------
Confidence 5678999999654322000 000111110 011234666666543 33333222 788999943221
Q ss_pred CCCcceeecCeEecccC-----CCCEEEEecCCC---eEEEEeCCC---cEEEeeCCCCCCCCCCCceec--CCCCCeeE
Q 014875 217 KDRIRSVSLPQVTIGLH-----DIEIVGISANGD---RSAALSAEG---HLYTWGRGFNSTSDVNCPQSL--PSSLSFSQ 283 (416)
Q Consensus 217 ~~~~~~~~~p~~~~~~~-----~~~i~~i~~g~~---~~~~lt~~G---~vy~wG~~~~~~~~~~~p~~~--~~~~~i~~ 283 (416)
. ....+.... ...|..++.... ..+.-..+| .|+.|-....... ...+ .....|..
T Consensus 199 ----~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~----~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 199 ----K---EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP----LQTLNQGHQKGILS 267 (416)
T ss_dssp ----E---EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC----SBCCCSCCSSCEEE
T ss_pred ----C---cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC----cEEeecCccCceeE
Confidence 0 011111110 235666655432 444455666 8888865432211 0111 13446777
Q ss_pred EEe---cCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCC---CeeEEEECCCCE
Q 014875 284 AAL---GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA---EHSAVVTENRAI 357 (416)
Q Consensus 284 i~~---g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~---~h~~~l~~~g~v 357 (416)
++. .....+.-..||.|+.|-...... ...+... ...|..++... ...+.-..||.|
T Consensus 268 ~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~----------------~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGRDNTVLLWNPESAEQ----------------LSQFPAR-GNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp EEECSSCSSCEEEEESSSEEEEECSSSCCE----------------EEEEECS-SSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred EEeCCCCCCeEEEEeCCCCEEEeeCCCCcc----------------ceeecCC-CCceEEEEECCCCCCEEEEEecCCcE
Confidence 765 345566667789999995432110 1111111 11344444433 334444567889
Q ss_pred EEEECCCCC
Q 014875 358 MTWGWGEHG 366 (416)
Q Consensus 358 y~wG~n~~g 366 (416)
..|-.....
T Consensus 331 ~iw~~~~~~ 339 (416)
T 2pm9_A 331 EVQTLQNLT 339 (416)
T ss_dssp EEEESCCCC
T ss_pred EEEEccCCC
Confidence 999876543
No 73
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=53.98 E-value=1.1e+02 Score=26.66 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=12.8
Q ss_pred CCeEEEEEeccCCCeEEEeCCC
Q 014875 187 MRHSLVLLKDCLGNQVYGFGSG 208 (416)
Q Consensus 187 ~~hs~~lt~~~~~g~vy~wG~n 208 (416)
..|+++.. +++||++|-.
T Consensus 140 ~~~~~~~~----~~~iyv~GG~ 157 (315)
T 4asc_A 140 YGHTVLSH----MDLVYVIGGK 157 (315)
T ss_dssp BSCEEEEE----TTEEEEECCB
T ss_pred cceeEEEE----CCEEEEEeCC
Confidence 45666664 5899999853
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=53.77 E-value=1.2e+02 Score=26.98 Aligned_cols=202 Identities=17% Similarity=0.088 Sum_probs=101.1
Q ss_pred CCCCeEEEEeCC-cce--EEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeee-----cCCCcccEEEEeec--
Q 014875 65 SLSSVSMLACGG-AHV--LALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTF-----FDGHRYTITHISAG-- 134 (416)
Q Consensus 65 ~~~~i~~ia~G~-~h~--~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~-----~~~~~~~i~~i~~G-- 134 (416)
....|..++... ... +.-.. ||.|..|-........ ......... +......|..++..
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGS-----DGVIVLYDLENSSRQS------YYTCKAVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEET-----TSCEEEEECCCCSSSS------CEEECEEEEECTTCTTCCSSCEEEEEECTT
T ss_pred cCCcEEEEEEecCCCCEEEEEcC-----CCeEEEEECCCCcccc------eEeccccccccccccccCCCcEEEEEEccC
Confidence 335788888765 333 33345 8999999765322211 111111110 11122457777653
Q ss_pred -CceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC-----eEEEEEeccCCCeEEEeCCC
Q 014875 135 -WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR-----HSLVLLKDCLGNQVYGFGSG 208 (416)
Q Consensus 135 -~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~-----hs~~lt~~~~~g~vy~wG~n 208 (416)
....+.-..+|.|..|-..... +...... ...+..+..... ..++-.. +|.|+.|-..
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~ 174 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQ------------TADVFNF-EETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLK 174 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTE------------EEEEEEC-SSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESS
T ss_pred CCcEEEEEeCCCeEEEeeCCCCc------------cceeccC-CCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCC
Confidence 3455556678999999643311 1111111 233555544332 2333344 8899999543
Q ss_pred CCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCC---eEEEEeCCCcEEEeeCCCCCCCC----------CCCc--e
Q 014875 209 KRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD---RSAALSAEGHLYTWGRGFNSTSD----------VNCP--Q 273 (416)
Q Consensus 209 ~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~---~~~~lt~~G~vy~wG~~~~~~~~----------~~~p--~ 273 (416)
... ....+.. ....|..++.... ..+.-..+|.|+.|-.......- ...+ .
T Consensus 175 ~~~-------------~~~~~~~-~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 175 SGS-------------CSHILQG-HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp SSC-------------CCEEECC-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred Ccc-------------eeeeecC-CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 211 0111111 2234666655433 24556789999999764332110 0000 0
Q ss_pred ecCCCCCeeEEEec--CceEEEEecCCCEEEeeCCC
Q 014875 274 SLPSSLSFSQAALG--WNHVLVLTGDGEVLMLGGSH 307 (416)
Q Consensus 274 ~~~~~~~i~~i~~g--~~~~~~lt~~g~vy~~G~n~ 307 (416)
.......|..++.. ..+.+....+|.++.|-...
T Consensus 241 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 01234457777664 34566667889999997654
No 75
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=52.50 E-value=1.2e+02 Score=26.50 Aligned_cols=18 Identities=11% Similarity=0.052 Sum_probs=12.2
Q ss_pred CCeEEEEeCCCcEEEeeCC
Q 014875 244 GDRSAALSAEGHLYTWGRG 262 (416)
Q Consensus 244 ~~~~~~lt~~G~vy~wG~~ 262 (416)
..|+++. .+++||++|-.
T Consensus 140 ~~~~~~~-~~~~iyv~GG~ 157 (315)
T 4asc_A 140 YGHTVLS-HMDLVYVIGGK 157 (315)
T ss_dssp BSCEEEE-ETTEEEEECCB
T ss_pred cceeEEE-ECCEEEEEeCC
Confidence 3455555 57789999864
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=51.64 E-value=2e+02 Score=28.84 Aligned_cols=230 Identities=12% Similarity=0.030 Sum_probs=111.8
Q ss_pred CCeEEEEeCCcceEEe--eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEee--cCceEEEEE
Q 014875 67 SSVSMLACGGAHVLAL--TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISA--GWNHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~l--t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~--G~~~~~~lt 142 (416)
..|..|+.......++ .. +|.|..|-... + ..+..+......|..++- .....+.-.
T Consensus 14 ~~v~~i~~sp~~~~la~~~~-----~g~v~iwd~~~-~-------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLY-----SGRVEIWNYET-Q-------------VEVRSIQVTETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp SCEEEEEECSSSSEEEEEET-----TSEEEEEETTT-T-------------EEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeC-----CCEEEEEECCC-C-------------ceEEEEecCCCcEEEEEEeCCCCEEEEEe
Confidence 3677777654443332 34 78899996432 1 112222222234554443 334455567
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeE-EEEEeccCCCeEEEeCCCCCCCCCCCCCCcc
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHS-LVLLKDCLGNQVYGFGSGKRGQLGVSKDRIR 221 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs-~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~ 221 (416)
.+|.|++|-...... ...+.. ....|..++...+.. ++.... +|.|..|-....
T Consensus 75 ~dg~i~vw~~~~~~~-----------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~--dg~i~vw~~~~~----------- 129 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEK-----------VVDFEA-HPDYIRSIAVHPTKPYVLSGSD--DLTVKLWNWENN----------- 129 (814)
T ss_dssp TTSEEEEEETTTCCE-----------EEEEEC-CSSCEEEEEECSSSSEEEEEET--TSEEEEEEGGGT-----------
T ss_pred CCCeEEEEECCCCcE-----------EEEEec-CCCCEEEEEEeCCCCEEEEEcC--CCEEEEEECCCC-----------
Confidence 789999996543211 111111 124577777654432 333332 788998843210
Q ss_pred eeecCeEecccCCCCEEEEecCC---CeEEEEeCCCcEEEeeCCCCCCCCCCCceec--CCCCCeeEEEe----cCceEE
Q 014875 222 SVSLPQVTIGLHDIEIVGISANG---DRSAALSAEGHLYTWGRGFNSTSDVNCPQSL--PSSLSFSQAAL----GWNHVL 292 (416)
Q Consensus 222 ~~~~p~~~~~~~~~~i~~i~~g~---~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~--~~~~~i~~i~~----g~~~~~ 292 (416)
......+. .....|..++... ...+.-..+|.|+.|-...... ...+ .....+..++. .....+
T Consensus 130 -~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 130 -WALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-----NFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp -SEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC-----SEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred -ceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-----eeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 00111111 1223566666543 3455556789999996532111 1111 11234555544 334555
Q ss_pred EEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCC--CeeEEEECCCCEEEEECCC
Q 014875 293 VLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA--EHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 293 ~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~--~h~~~l~~~g~vy~wG~n~ 364 (416)
.-+.+|.|+.|-..... ....+.. ....|..++... ...+....||.|+.|-...
T Consensus 203 ~~~~dg~i~~~d~~~~~----------------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKS----------------CVATLEG-HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EECTTSEEEEEETTTTE----------------EEEEEEC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEeCCCEEEEEECCCCc----------------EEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 55678889888543110 0111111 112455554433 3344456678888886554
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=48.66 E-value=2.8e+02 Score=29.65 Aligned_cols=188 Identities=11% Similarity=0.075 Sum_probs=85.3
Q ss_pred ceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCC
Q 014875 136 NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGV 215 (416)
Q Consensus 136 ~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~ 215 (416)
.+.+.-..+|.|..|-......+ .+.. ....|..++...+..++.... +|.|+.|-.... ++
T Consensus 1016 ~~l~s~~~dg~i~vwd~~~~~~~------------~~~~-~~~~v~~~~~~~~~~l~~~~~--dg~v~vwd~~~~-~~-- 1077 (1249)
T 3sfz_A 1016 KTLISSSEDSVIQVWNWQTGDYV------------FLQA-HQETVKDFRLLQDSRLLSWSF--DGTVKVWNVITG-RI-- 1077 (1249)
T ss_dssp SCEEEECSSSBEEEEETTTTEEE------------CCBC-CSSCEEEEEECSSSEEEEEES--SSEEEEEETTTT-CC--
T ss_pred CEEEEEcCCCEEEEEECCCCceE------------EEec-CCCcEEEEEEcCCCcEEEEEC--CCcEEEEECCCC-ce--
Confidence 34445567888999865431110 1111 123466666554444433332 899999954321 11
Q ss_pred CCCCcceeecCeEecccCCCCEEEE--ecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCc--eE
Q 014875 216 SKDRIRSVSLPQVTIGLHDIEIVGI--SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWN--HV 291 (416)
Q Consensus 216 ~~~~~~~~~~p~~~~~~~~~~i~~i--~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~--~~ 291 (416)
...+... ...|..+ +......+.-..+|.|+.|-........ ........|..++...+ ..
T Consensus 1078 ----------~~~~~~~-~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~----~l~~h~~~v~~~~~s~dg~~l 1142 (1249)
T 3sfz_A 1078 ----------ERDFTCH-QGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLH----ELKGHNGCVRCSAFSLDGILL 1142 (1249)
T ss_dssp ----------CEEEECC-SSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSB----CCCCCSSCEEEEEECSSSSEE
T ss_pred ----------eEEEccc-CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceee----eeccCCCcEEEEEECCCCCEE
Confidence 0111111 1122222 2233345555678888888543222111 01112345666655433 34
Q ss_pred EEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCCeeEEEECCCCEEEEECCC
Q 014875 292 LVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAEHSAVVTENRAIMTWGWGE 364 (416)
Q Consensus 292 ~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g~vy~wG~n~ 364 (416)
+.-+.||.|+.|-......+..- .+. ............|..++...+..++++.+|.|..|-...
T Consensus 1143 at~~~dg~i~vwd~~~~~~~~~~------~~~--~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~ 1207 (1249)
T 3sfz_A 1143 ATGDDNGEIRIWNVSDGQLLHSC------API--SVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNVAT 1207 (1249)
T ss_dssp EEEETTSCCCEEESSSSCCCCCC------CCC--C-------CCSCCCEEEECTTSSCEEEESSSEEEBCSSS
T ss_pred EEEeCCCEEEEEECCCCceEEEe------ccc--cccccccccCceEEEEEECCCCCEEEECCCeEEEEECCC
Confidence 44456788888865432222110 000 000000011124555555544444455568888887654
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=48.64 E-value=1.4e+02 Score=26.08 Aligned_cols=151 Identities=7% Similarity=-0.053 Sum_probs=73.0
Q ss_pred ccEEEEeecCc--eEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC--eEEEEEeccCCCe
Q 014875 126 YTITHISAGWN--HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQ 201 (416)
Q Consensus 126 ~~i~~i~~G~~--~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~--hs~~lt~~~~~g~ 201 (416)
..|..++.... ..+.-..+|.|+.|-...... ...+.. ....|..++...+ +.+.... +|.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~-h~~~v~~~~~~~~~~~l~s~~~---dg~ 97 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER-----------LGTLDG-HTGTIWSIDVDCFTKYCVTGSA---DYS 97 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE-----------EEEECC-CSSCEEEEEECTTSSEEEEEET---TTE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh-----------hhhhhh-cCCcEEEEEEcCCCCEEEEEeC---CCe
Confidence 46777766443 344446789999995432111 111111 1245777766533 3333344 899
Q ss_pred EEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEec--CCCeEEEEeCC-----CcEEEeeCCCCCCCCCC----
Q 014875 202 VYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAE-----GHLYTWGRGFNSTSDVN---- 270 (416)
Q Consensus 202 vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~--g~~~~~~lt~~-----G~vy~wG~~~~~~~~~~---- 270 (416)
|+.|-..... .. ..+. ....+..++. ...+.++...+ |.|+.|-..........
T Consensus 98 i~iwd~~~~~-------~~------~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~ 162 (369)
T 3zwl_B 98 IKLWDVSNGQ-------CV------ATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVS 162 (369)
T ss_dssp EEEEETTTCC-------EE------EEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEEC
T ss_pred EEEEECCCCc-------EE------EEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccc
Confidence 9999433210 00 0111 1223444443 33444555556 88888865433322110
Q ss_pred --Cceec---CCCCCeeEEEec--CceEEEEecCCCEEEeeCC
Q 014875 271 --CPQSL---PSSLSFSQAALG--WNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 271 --~p~~~---~~~~~i~~i~~g--~~~~~~lt~~g~vy~~G~n 306 (416)
....+ .....+..++.. ....++.+.+|.|+.|-..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 163 EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS 205 (369)
T ss_dssp SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 00011 111145544443 3345555678888888653
No 79
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=48.46 E-value=1.7e+02 Score=27.04 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=56.4
Q ss_pred EEEEeecCceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCC
Q 014875 128 ITHISAGWNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGS 207 (416)
Q Consensus 128 i~~i~~G~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~ 207 (416)
|.+|++ ....+++.++|.|..|=.....+. ..+..+. ..+.++.+-....++++. +|.|++|=-
T Consensus 90 V~~l~f-d~~~L~v~~~~~l~v~dv~sl~~~-----------~~~~~~~-~~v~~i~~~~p~~av~~~---dG~L~v~dl 153 (388)
T 1xip_A 90 VIFVCF-HGDQVLVSTRNALYSLDLEELSEF-----------RTVTSFE-KPVFQLKNVNNTLVILNS---VNDLSALDL 153 (388)
T ss_dssp EEEEEE-ETTEEEEEESSEEEEEESSSTTCE-----------EEEEECS-SCEEEEEECSSEEEEEET---TSEEEEEET
T ss_pred eeEEEE-CCCEEEEEcCCcEEEEEchhhhcc-----------Cccceee-cceeeEEecCCCEEEEEC---CCCEEEEEc
Confidence 888998 666777778888999865443221 1111211 335566655555666677 999999943
Q ss_pred CCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEe
Q 014875 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTW 259 (416)
Q Consensus 208 n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~w 259 (416)
.+. ++ . + + ...|..++-...-.++...+|.+..|
T Consensus 154 ~~~-~~-------~----~--~----~~~Vs~v~WSpkG~~vg~~dg~i~~~ 187 (388)
T 1xip_A 154 RTK-ST-------K----Q--L----AQNVTSFDVTNSQLAVLLKDRSFQSF 187 (388)
T ss_dssp TTC-CE-------E----E--E----EESEEEEEECSSEEEEEETTSCEEEE
T ss_pred cCC-cc-------c----c--c----cCCceEEEEcCCceEEEEcCCcEEEE
Confidence 211 10 0 0 1 11466666555555555667776666
No 80
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=48.29 E-value=1.5e+02 Score=26.54 Aligned_cols=218 Identities=10% Similarity=0.010 Sum_probs=115.2
Q ss_pred EEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC-----ceEEEEEeCCC
Q 014875 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW-----NHSGFVSDSGC 146 (416)
Q Consensus 72 ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~-----~~~~~lt~~G~ 146 (416)
.+....+.+++|+ .|++|..-...--..+.... -......+...++ .+|+.+.... .+.+++|++|.
T Consensus 49 ~~~t~d~ll~fT~-----~Gr~y~~~~~~lp~~~r~~~-G~~i~~~l~l~~~--e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 49 VCSTHDLILFFTT-----QGRVYRAKAYDLPEASRTAR-GQHVANLLAFQPE--ERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp EEETTSEEEEEET-----TSEEEEEEGGGSCBCCSSSC-CEEHHHHTTCCTT--CCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred EeCCCCEEEEEeC-----CCeEEEEEHHHCcCCCccCC-CEEHHHccCCCCC--CEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 3455666788999 99999987543221111110 0111112222233 6787776654 46788899998
Q ss_pred EEEEcCCCCccccCCCCCCcccceEeeec-CCCceEEE--EeCCCeEEEEEeccCCCeEEEeCCC--CCCCCCCCCCCcc
Q 014875 147 LFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQI--ACGMRHSLVLLKDCLGNQVYGFGSG--KRGQLGVSKDRIR 221 (416)
Q Consensus 147 v~~~G~n~~gqlG~~~~~~~~~p~~v~~~-~~~~i~~i--~~G~~hs~~lt~~~~~g~vy~wG~n--~~gqlG~~~~~~~ 221 (416)
+.-.-...|-.. ...-.....+ .+..++.+ +.+.++.+++|+ +|++|.+-.. +--.+|.......
T Consensus 121 iKr~~l~~~~~~-------~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~---~G~~~rf~~~~~eip~~gr~a~Gv~ 190 (327)
T 3uc1_A 121 VKKSKLTDFDSN-------RSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSA---NGQSIRFSATDEALRPMGRATSGVQ 190 (327)
T ss_dssp EEEEEGGGGCCC-------CSSCEESCBCCTTCCEEEEEEECTTCEEEEEET---TSEEEEEECCTTTSCCCCTTSBCEE
T ss_pred EEEeEHHHhhcc-------ccCceEEEEECCCCEEEEEEEecCCCEEEEEEC---CCeEEEEECcccccCcCCcCCCCee
Confidence 775543322110 0011111111 23444443 346677888888 9999998776 5444444321111
Q ss_pred eeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCC-----CCCCCceecCCCCCeeEEE--ecCceEE
Q 014875 222 SVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNST-----SDVNCPQSLPSSLSFSQAA--LGWNHVL 292 (416)
Q Consensus 222 ~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~-----~~~~~p~~~~~~~~i~~i~--~g~~~~~ 292 (416)
.+...++..|+.+..- ..+.+.+|++|.+.-.-...+.. .+...-........++.+. .+....+
T Consensus 191 ------~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~ 264 (327)
T 3uc1_A 191 ------GMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELY 264 (327)
T ss_dssp ------SSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred ------eecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEE
Confidence 1112234567766553 34678888998776654322211 1111111111133455443 3567889
Q ss_pred EEecCCCEEEeeCCCCCCCCC
Q 014875 293 VLTGDGEVLMLGGSHHGMLSD 313 (416)
Q Consensus 293 ~lt~~g~vy~~G~n~~gqlG~ 313 (416)
++|++|++..+-..+-..+|.
T Consensus 265 l~T~~G~~ir~~~~~i~~~gR 285 (327)
T 3uc1_A 265 AVTSGGGVIRTAARQVRKAGR 285 (327)
T ss_dssp EEEGGGCEEEEEGGGSCBCCT
T ss_pred EEcCCCeEEEEehhhccccCC
Confidence 999999999886655544444
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=47.96 E-value=1.6e+02 Score=26.76 Aligned_cols=189 Identities=14% Similarity=0.109 Sum_probs=89.3
Q ss_pred EEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceEEEEEeCCCEEE
Q 014875 72 LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHSGFVSDSGCLFT 149 (416)
Q Consensus 72 ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~~~lt~~G~v~~ 149 (416)
|+=+....+++.- |+.||.|-... |+ ...+..+......|..|+-.. .+.+.-+.||.|..
T Consensus 111 l~wS~~n~lAvgl-----d~tV~lWd~~t-g~-----------~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~i 173 (420)
T 4gga_A 111 VDWSSGNVLAVAL-----DNSVYLWSASS-GD-----------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQL 173 (420)
T ss_dssp EEECTTSEEEEEE-----TTEEEEEETTT-CC-----------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCEEEEEe-----CCEEEEEECCC-CC-----------EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEE
Confidence 3334456777777 89999996432 21 111212222223466666543 34444568899999
Q ss_pred EcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEe
Q 014875 150 CGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVT 229 (416)
Q Consensus 150 ~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~ 229 (416)
|-......+ ..+.. -...+..++......+.-.. ++.++.|-...... .. ..+
T Consensus 174 Wd~~~~~~~-----------~~~~~-h~~~v~~~s~~~~~l~sgs~---d~~i~~~d~~~~~~-----------~~-~~~ 226 (420)
T 4gga_A 174 WDVQQQKRL-----------RNMTS-HSARVGSLSWNSYILSSGSR---SGHIHHHDVRVAEH-----------HV-ATL 226 (420)
T ss_dssp EETTTTEEE-----------EEECC-CSSCEEEEEEETTEEEEEET---TSEEEEEETTSSSC-----------EE-EEE
T ss_pred EEcCCCcEE-----------EEEeC-CCCceEEEeeCCCEEEEEeC---CCceeEeeecccce-----------ee-EEe
Confidence 965432111 11111 12345556554443333344 78888874321100 00 011
Q ss_pred cccCCCCEEEE--ecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec--CceEEEE---ecCCCEEE
Q 014875 230 IGLHDIEIVGI--SANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG--WNHVLVL---TGDGEVLM 302 (416)
Q Consensus 230 ~~~~~~~i~~i--~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g--~~~~~~l---t~~g~vy~ 302 (416)
.. ....+..+ .....+.+....+|.+..|-....................|..++.. ....+++ +.|+.|..
T Consensus 227 ~~-h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 227 SG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp EC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred cc-cccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 11 11123333 33345566667889999996543222111111122233345555443 2222322 25778888
Q ss_pred eeC
Q 014875 303 LGG 305 (416)
Q Consensus 303 ~G~ 305 (416)
|-.
T Consensus 306 wd~ 308 (420)
T 4gga_A 306 WNV 308 (420)
T ss_dssp EET
T ss_pred EeC
Confidence 854
No 82
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=47.69 E-value=1.5e+02 Score=26.35 Aligned_cols=233 Identities=15% Similarity=0.067 Sum_probs=111.4
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceEEEEEeC
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHSGFVSDS 144 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~~~lt~~ 144 (416)
..|.+|+......++...+ ||.|..|-...... ...... .+..+...|..|+... .+.+.-..|
T Consensus 83 ~~v~~~~~s~d~~l~~~s~----dg~v~lWd~~~~~~--------~~~~~~--~~~~H~~~V~~v~~spdg~~l~sgs~d 148 (344)
T 4gqb_B 83 AGVADLTWVGERGILVASD----SGAVELWELDENET--------LIVSKF--CKYEHDDIVSTVSVLSSGTQAVSGSKD 148 (344)
T ss_dssp SCEEEEEEETTTEEEEEET----TSEEEEEEECTTSS--------CEEEEE--EEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCEEEEEEeCCCeEEEEEC----CCEEEEEeccCCCc--------eeEeec--cccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 3577787655544444432 89999996543211 111111 1112224566666543 344444678
Q ss_pred CCEEEEcCCCCccccCCCCCCcccceEeeecC--CCceEEEEeCCCe-EEEE-EeccCCCeEEEeCCCCCCCCCCCCCCc
Q 014875 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMRH-SLVL-LKDCLGNQVYGFGSGKRGQLGVSKDRI 220 (416)
Q Consensus 145 G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~~h-s~~l-t~~~~~g~vy~wG~n~~gqlG~~~~~~ 220 (416)
|.|..|-.... ..+..+. ...|..++...+. .+++ ... |+.|..|=... ++.
T Consensus 149 ~~i~iwd~~~~--------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~-~~~------- 204 (344)
T 4gqb_B 149 ICIKVWDLAQQ--------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSE--DNRILLWDTRC-PKP------- 204 (344)
T ss_dssp SCEEEEETTTT--------------EEEEEECCCSSCEEEEEECSSCTTEEEEEET--TSCEEEEETTS-SSC-------
T ss_pred CeEEEEECCCC--------------cEEEEEcCcCCceEEEEecCCCCCceeeecc--ccccccccccc-cce-------
Confidence 88998854321 1122222 2457777765432 2322 222 79999993221 110
Q ss_pred ceeecCeEecccCCCCEEEEecC---CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecC---ceEEEE
Q 014875 221 RSVSLPQVTIGLHDIEIVGISAN---GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGW---NHVLVL 294 (416)
Q Consensus 221 ~~~~~p~~~~~~~~~~i~~i~~g---~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~---~~~~~l 294 (416)
.. ..........+..++.. ....+.-..+|.|..|-......+ .........|..|+... ...+.-
T Consensus 205 --~~--~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 205 --AS--QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp --EE--ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC----EEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred --ee--eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE----EEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 00 00001112234444432 223333467899999954321111 11112345677777643 234445
Q ss_pred ecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCC-Cee-EE-EECCCCEEEEECC
Q 014875 295 TGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGA-EHS-AV-VTENRAIMTWGWG 363 (416)
Q Consensus 295 t~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~-~h~-~~-l~~~g~vy~wG~n 363 (416)
..||.|+.|-... ++ ....... ...|..++... ... ++ -..||.|..|=..
T Consensus 277 s~D~~i~vwd~~~-~~----------------~~~~~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 277 SEDCSLAVLDSSL-SE----------------LFRSQAH-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp ETTSCEEEECTTC-CE----------------EEEECCC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred eCCCeEEEEECCC-Cc----------------EEEEcCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 7899999994321 11 1111111 12577776542 222 32 3578999999643
No 83
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=45.20 E-value=1.8e+02 Score=26.57 Aligned_cols=160 Identities=12% Similarity=0.081 Sum_probs=0.0
Q ss_pred EEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEec-----CCCeEEEEeCCCc
Q 014875 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-----NGDRSAALSAEGH 255 (416)
Q Consensus 181 ~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~-----g~~~~~~lt~~G~ 255 (416)
..++.+.++.+++|+ .|++|.+-..+--..|.. ..-.+....+...++.+|+.+.. ...+.+++|++|.
T Consensus 51 ~~~~~t~d~ll~fT~---~G~~~~~~~~eip~~~r~---a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 124 (370)
T 3l6v_A 51 LWLVNTHDTLLTFTS---SGKVFWLPVHQLPEAGSN---ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGT 124 (370)
T ss_dssp EEEECTTCEEEEEET---TSEEEEEEGGGSCBCCTT---SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred EEEecCCCEEEEEeC---CCeEEEEEHHHCcCCCcc---cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCe
Q ss_pred EEEeeCCCCCC--CCCCCceecCCCCCeeEEEe--cCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeec
Q 014875 256 LYTWGRGFNST--SDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331 (416)
Q Consensus 256 vy~wG~~~~~~--~~~~~p~~~~~~~~i~~i~~--g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~ 331 (416)
+.-.-...+.. ..-..-..+..+..++.+.. +....+++|++|++..+-..+--.+|..... ..-+.
T Consensus 125 vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~G---------V~~i~ 195 (370)
T 3l6v_A 125 VKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATG---------VRGIR 195 (370)
T ss_dssp EEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCC---------EECCC
T ss_pred EEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCC---------eeeEE
Q ss_pred cCCCCcEEEEecCC-------------------------------------CeeEEEECCC
Q 014875 332 NLDGVKVIQIAAGA-------------------------------------EHSAVVTENR 355 (416)
Q Consensus 332 ~~~~~~v~~i~~G~-------------------------------------~h~~~l~~~g 355 (416)
...+..|+.+..-. .+.+.+|++|
T Consensus 196 L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G 256 (370)
T 3l6v_A 196 LAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENG 256 (370)
T ss_dssp CCTTCCEEEEEEECCC-----------------------------------CEEEEEETTS
T ss_pred eCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCC
No 84
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=44.60 E-value=1.5e+02 Score=25.44 Aligned_cols=26 Identities=8% Similarity=0.043 Sum_probs=14.4
Q ss_pred CEEEEecCCCeEEEEeCC-Cc-EEEeeC
Q 014875 236 EIVGISANGDRSAALSAE-GH-LYTWGR 261 (416)
Q Consensus 236 ~i~~i~~g~~~~~~lt~~-G~-vy~wG~ 261 (416)
.+.-........++++.+ |+ +|-++.
T Consensus 177 ~~~v~~~~~~~v~~~d~~tG~~~w~~~~ 204 (276)
T 3no2_A 177 DCLVACGDAHCFVQLNLESNRIVRRVNA 204 (276)
T ss_dssp CEEEECBTTSEEEEECTTTCCEEEEEEG
T ss_pred CEEEEeCCCCeEEEEeCcCCcEEEEecC
Confidence 444344444457777776 76 455543
No 85
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=43.22 E-value=1.8e+02 Score=26.04 Aligned_cols=99 Identities=11% Similarity=-0.059 Sum_probs=53.8
Q ss_pred eEEEEeCCCcEEEeeCCCCCCCCCCCceecC--CCCCeeEEEecCc---eEEEEecCCCEEEeeCCCCCCCCCCCCCccc
Q 014875 246 RSAALSAEGHLYTWGRGFNSTSDVNCPQSLP--SSLSFSQAALGWN---HVLVLTGDGEVLMLGGSHHGMLSDPERVSST 320 (416)
Q Consensus 246 ~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~--~~~~i~~i~~g~~---~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~ 320 (416)
+.++-..+|.|+.|-..... .+..+. ....|..++.... ..+.-..+|.|+.|-.....++
T Consensus 261 ~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~--------- 326 (420)
T 3vl1_A 261 YVIAGHVSGVITVHNVFSKE-----QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP--------- 326 (420)
T ss_dssp EEEEEETTSCEEEEETTTCC-----EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC---------
T ss_pred EEEEEcCCCeEEEEECCCCc-----eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc---------
Confidence 44555778899999653221 112222 2346777776543 5666678899999965432110
Q ss_pred CccccceeeeccCCCCcEEEEecCCCeeEE-EECCCCEEEEECCC
Q 014875 321 RPLSVALEKVSNLDGVKVIQIAAGAEHSAV-VTENRAIMTWGWGE 364 (416)
Q Consensus 321 ~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~-l~~~g~vy~wG~n~ 364 (416)
...+.......|..+.......++ -..||.|..|-...
T Consensus 327 ------~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 327 ------VGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp ------SEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred ------hhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 111111122245555554444444 34678899998655
No 86
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=42.96 E-value=1.8e+02 Score=25.86 Aligned_cols=190 Identities=11% Similarity=0.015 Sum_probs=91.8
Q ss_pred ccEEEEeecC--ceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecC--CCceEEEEeCCC--e-EEEEEeccC
Q 014875 126 YTITHISAGW--NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFV--NKNVHQIACGMR--H-SLVLLKDCL 198 (416)
Q Consensus 126 ~~i~~i~~G~--~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~~--h-s~~lt~~~~ 198 (416)
..|..|+... .+.+.-..+|.|..|-.... ..+..+. ...|..|+.... . .+.-..
T Consensus 140 ~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~--------------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~--- 202 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK--------------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGE--- 202 (357)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTCSSCEEEEET---
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------------cEEEEEcCCCCCEEEEEEccCCCceeeeecc---
Confidence 3466665543 33444467888999854321 1122111 245777765432 2 233344
Q ss_pred CCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecC---CCeEEEEeCCCcEEEeeCCCCCCCCCCCceec
Q 014875 199 GNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN---GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL 275 (416)
Q Consensus 199 ~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g---~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~ 275 (416)
+|.|..|-... ++. ............+..++.. ....+.-..++.|+.|-...... .....
T Consensus 203 dg~v~~wd~~~-~~~-----------~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~----~~~~~ 266 (357)
T 4g56_B 203 DGRILLWDTRK-PKP-----------ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS----AQTSA 266 (357)
T ss_dssp TSCEEECCTTS-SSC-----------BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG----CEEEC
T ss_pred CCceEEEECCC-Cce-----------eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE----eEEEe
Confidence 89999994321 110 0000001112345556543 22333346789999995432111 11111
Q ss_pred CCCCCeeEEEecC---ceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecC---CCeeE
Q 014875 276 PSSLSFSQAALGW---NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG---AEHSA 349 (416)
Q Consensus 276 ~~~~~i~~i~~g~---~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G---~~h~~ 349 (416)
.....|..++... ...+.-..||.|+.|-... ++ ....... ...|..|+.. ....+
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~----------------~~~~~~H-~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SE----------------VFRDLSH-RDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CE----------------EEEECCC-SSCEEEEEECSSSTTEEE
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-Cc----------------EeEECCC-CCCEEEEEEeCCCCCEEE
Confidence 2345677776542 2334456889999994321 11 0111111 1257777754 22333
Q ss_pred EEECCCCEEEEECCCCC
Q 014875 350 VVTENRAIMTWGWGEHG 366 (416)
Q Consensus 350 ~l~~~g~vy~wG~n~~g 366 (416)
.-..||.|+.|=....+
T Consensus 329 s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEETTSCEEEEECC---
T ss_pred EEcCCCeEEEEECCCCC
Confidence 34678999999765543
No 87
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=42.50 E-value=2e+02 Score=26.18 Aligned_cols=228 Identities=12% Similarity=0.108 Sum_probs=109.0
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceEEEEEeC
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHSGFVSDS 144 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~~~lt~~ 144 (416)
..|..++......++++.+. ||.|..|-.... + .+..+......|..|+... ...+.-..|
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~---Dg~i~vwd~~~~-~-------------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASE---DATIKVWDYETG-D-------------FERTLKGHTDSVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp SCEEEEEECSSSSEEEEEES---SSCEEEEETTTC-C-------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCC-c-------------EEEEEeccCCcEEEEEEcCCCCEEEEEeCC
Confidence 36778877665555554321 889999964321 1 1122222224566665433 334444577
Q ss_pred CCEEEEcCCCCccccCCCCCCcccceEeeec--CCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCCCCCc
Q 014875 145 GCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF--VNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRI 220 (416)
Q Consensus 145 G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~--~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~ 220 (416)
|.|..|-....-. +..+ -...|..++...+ +.+.-.. ++.|..|-.... +.
T Consensus 172 ~~i~iwd~~~~~~--------------~~~~~~h~~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~-~~------- 226 (410)
T 1vyh_C 172 MTIKLWDFQGFEC--------------IRTMHGHDHNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTG-YC------- 226 (410)
T ss_dssp SCCCEEETTSSCE--------------EECCCCCSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTC-CE-------
T ss_pred CeEEEEeCCCCce--------------eEEEcCCCCCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCC-cE-------
Confidence 8888885432111 1111 1134666665433 3333344 899999954221 00
Q ss_pred ceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec-----------
Q 014875 221 RSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG----------- 287 (416)
Q Consensus 221 ~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g----------- 287 (416)
...+.. ....|..+... ....+.-..+|.|..|-....... .........|..++..
T Consensus 227 -----~~~~~~-h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 227 -----VKTFTG-HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK----AELREHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp -----EEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE----EEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred -----EEEEeC-CCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee----eEecCCCceEEEEEEcCcccccchhhh
Confidence 001111 11234444332 334455567888988854321110 0000112223333322
Q ss_pred -----------CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEec--CCCeeEEEECC
Q 014875 288 -----------WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAA--GAEHSAVVTEN 354 (416)
Q Consensus 288 -----------~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~--G~~h~~~l~~~ 354 (416)
..+.+.-+.||.|..|-..... ....+... ...|..++. ...+.+.-..|
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~----------------~~~~~~~h-~~~v~~v~~~~~g~~l~s~s~D 359 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM----------------CLMTLVGH-DNWVRGVLFHSGGKFILSCADD 359 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTE----------------EEEEEECC-SSCEEEEEECSSSSCEEEEETT
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCc----------------eEEEEECC-CCcEEEEEEcCCCCEEEEEeCC
Confidence 2345555778889999643210 01111111 124555543 34455566788
Q ss_pred CCEEEEECC
Q 014875 355 RAIMTWGWG 363 (416)
Q Consensus 355 g~vy~wG~n 363 (416)
|.|+.|-..
T Consensus 360 ~~i~vwd~~ 368 (410)
T 1vyh_C 360 KTLRVWDYK 368 (410)
T ss_dssp TEEEEECCT
T ss_pred CeEEEEECC
Confidence 999999653
No 88
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=41.75 E-value=1.9e+02 Score=25.81 Aligned_cols=160 Identities=11% Similarity=0.024 Sum_probs=0.0
Q ss_pred EEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCC-----eEEEEeCCCc
Q 014875 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGD-----RSAALSAEGH 255 (416)
Q Consensus 181 ~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~-----~~~~lt~~G~ 255 (416)
..++...++.+++|+ .|++|..-..+--..+.. ..-.+....+...++.+|+.+..-.. +.+.+|++|.
T Consensus 44 ~~~~~t~d~ll~fT~---~Gr~~~~~~~elp~~~r~---a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 44 MLEMNTKDVLLLFTN---KGNYLYCPVHELPDIRWK---DLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp EEEEETTSEEEEEET---TSEEEEEEGGGSCBCCTT---SCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred EEEECCCCEEEEEEC---CCEEEEEEHHHCcCCCCC---CCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCe
Q ss_pred EEEeeCCCCCC---CCCCCceecCCCCCeeEEEe--cCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeee
Q 014875 256 LYTWGRGFNST---SDVNCPQSLPSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKV 330 (416)
Q Consensus 256 vy~wG~~~~~~---~~~~~p~~~~~~~~i~~i~~--g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~ 330 (416)
+.-.-...+.. ..-..-..+..+..++.+.. +..+.+++|++|+++.+-..+--.+|..... ..-+
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~G---------V~~i 188 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAG---------VKGM 188 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCC---------EECC
T ss_pred EEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcC---------EEEE
Q ss_pred ccCCCCcEEEEec--CCC-eeEEEECCC
Q 014875 331 SNLDGVKVIQIAA--GAE-HSAVVTENR 355 (416)
Q Consensus 331 ~~~~~~~v~~i~~--G~~-h~~~l~~~g 355 (416)
....+..|+.+.. -.. ..++++++|
T Consensus 189 ~L~~~d~Vv~~~~~~~~~~~ll~vt~~G 216 (323)
T 1wp5_A 189 NLKEGDYIVSGQLITSKDESIVVATQRG 216 (323)
T ss_dssp CCCTTCCEEEEEEECCTTCEEEEEETTS
T ss_pred EeCCCCEEEEEEEEcCCCcEEEEEECCC
No 89
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=39.43 E-value=1.8e+02 Score=24.87 Aligned_cols=188 Identities=14% Similarity=0.052 Sum_probs=91.1
Q ss_pred CCeEEEEeCCcceEEe--eCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceEEEEE
Q 014875 67 SSVSMLACGGAHVLAL--TSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~l--t~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~~~lt 142 (416)
..|..++......+++ .. ||.+..|..... ..+..+......|..++... ...+.-.
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~-----dg~i~iw~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 84 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSA-----DKLIKIWGAYDG--------------KFEKTISGHKLGISDVAWSSDSNLLVSAS 84 (312)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSCEEEEETTTC--------------CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEECCCCCEEEEeeC-----CCeEEEEeCCCc--------------ccchhhccCCCceEEEEEcCCCCEEEEEC
Confidence 3677777654443333 34 889999975321 11112222224566665543 3344445
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEE--EEeccCCCeEEEeCCCCCCCCCCCCCCc
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLV--LLKDCLGNQVYGFGSGKRGQLGVSKDRI 220 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~--lt~~~~~g~vy~wG~n~~gqlG~~~~~~ 220 (416)
.+|.|..|-...... ...+.. ....|..++...+...+ -.. +|.|+.|-.... .
T Consensus 85 ~d~~i~vwd~~~~~~-----------~~~~~~-~~~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~---------~ 140 (312)
T 4ery_A 85 DDKTLKIWDVSSGKC-----------LKTLKG-HSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTG---------K 140 (312)
T ss_dssp TTSEEEEEETTTCCE-----------EEEEEC-CSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTC---------C
T ss_pred CCCEEEEEECCCCcE-----------EEEEcC-CCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCC---------E
Confidence 788888886432111 011111 12345555544333222 234 788999843211 0
Q ss_pred ceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceec-CCCCCeeEEEec--CceEEEEe
Q 014875 221 RSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL-PSSLSFSQAALG--WNHVLVLT 295 (416)
Q Consensus 221 ~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~-~~~~~i~~i~~g--~~~~~~lt 295 (416)
. ...+. .....|..++.. ....+.-..+|.|..|-...... ..... .....+..++.. ....++-+
T Consensus 141 ~----~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 141 C----LKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC----LKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp E----EEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE----EEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred E----EEEec-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce----eeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 0 01111 112245555443 33455566789999996532111 01111 122344444443 44556667
Q ss_pred cCCCEEEeeCC
Q 014875 296 GDGEVLMLGGS 306 (416)
Q Consensus 296 ~~g~vy~~G~n 306 (416)
.+|.|..|-..
T Consensus 212 ~d~~i~iwd~~ 222 (312)
T 4ery_A 212 LDNTLKLWDYS 222 (312)
T ss_dssp TTTEEEEEETT
T ss_pred CCCeEEEEECC
Confidence 78888888643
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=39.29 E-value=2.1e+02 Score=25.53 Aligned_cols=111 Identities=9% Similarity=-0.072 Sum_probs=53.7
Q ss_pred ccEEEEeecC---ceEEEEEeCC---CEEEEcCCCCccccCCCCCCcccceEeee-cCCCceEEEEeC---CCeEEEEEe
Q 014875 126 YTITHISAGW---NHSGFVSDSG---CLFTCGDGTFGQLGHGDYRSHSSPVKVSS-FVNKNVHQIACG---MRHSLVLLK 195 (416)
Q Consensus 126 ~~i~~i~~G~---~~~~~lt~~G---~v~~~G~n~~gqlG~~~~~~~~~p~~v~~-~~~~~i~~i~~G---~~hs~~lt~ 195 (416)
..|..++... ...+.-..+| .|+.|-..... .+..... .....|..++.. ....+.-..
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-----------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-----------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-----------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-----------CCcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 4466666543 2344445566 78888643311 1111111 112457777754 334444445
Q ss_pred ccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC---CeEEEEeCCCcEEEeeCCCC
Q 014875 196 DCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG---DRSAALSAEGHLYTWGRGFN 264 (416)
Q Consensus 196 ~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~---~~~~~lt~~G~vy~wG~~~~ 264 (416)
+|.|+.|-...... ...+.. ....|..++... ...+.-..+|.|..|-....
T Consensus 284 ---dg~v~~wd~~~~~~-------------~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 284 ---DNTVLLWNPESAEQ-------------LSQFPA-RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp ---SSEEEEECSSSCCE-------------EEEEEC-SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred ---CCCEEEeeCCCCcc-------------ceeecC-CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 89999995322100 011111 112344444333 34455567899999976443
No 91
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=39.14 E-value=2e+02 Score=25.22 Aligned_cols=136 Identities=11% Similarity=-0.015 Sum_probs=64.1
Q ss_pred EEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCC
Q 014875 138 SGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSK 217 (416)
Q Consensus 138 ~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~ 217 (416)
.+.-..||.|..|-......+ ..+.. -...|..++...+..++++. ..+|.|..|-.... +
T Consensus 157 l~s~s~d~~i~~wd~~~~~~~-----------~~~~~-h~~~v~~~~~~~~~~~l~sg-~~d~~v~~wd~~~~-~----- 217 (340)
T 1got_B 157 IVTSSGDTTCALWDIETGQQT-----------TTFTG-HTGDVMSLSLAPDTRLFVSG-ACDASAKLWDVREG-M----- 217 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEE-----------EEECC-CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTC-S-----
T ss_pred EEEEECCCcEEEEECCCCcEE-----------EEEcC-CCCceEEEEECCCCCEEEEE-eCCCcEEEEECCCC-e-----
Confidence 344456788888864321110 11111 12346666665443333332 11789999843211 0
Q ss_pred CCcceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecC---CCCCeeEEEec--Cce
Q 014875 218 DRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLP---SSLSFSQAALG--WNH 290 (416)
Q Consensus 218 ~~~~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~---~~~~i~~i~~g--~~~ 290 (416)
....+.. ....|..++.. ....+.-..+|.|..|-......+ ..+. ....|..++.. ...
T Consensus 218 -------~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 218 -------CRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL-----MTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp -------EEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----EEECCTTCCSCEEEEEECTTSSE
T ss_pred -------eEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE-----EEEccCCcccceEEEEECCCCCE
Confidence 0011111 12245555543 344555567899999965322111 0111 11245555543 334
Q ss_pred EEEEecCCCEEEeeC
Q 014875 291 VLVLTGDGEVLMLGG 305 (416)
Q Consensus 291 ~~~lt~~g~vy~~G~ 305 (416)
.++-..||.|+.|-.
T Consensus 285 l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 285 LLAGYDDFNCNVWDA 299 (340)
T ss_dssp EEEEETTSEEEEEET
T ss_pred EEEECCCCeEEEEEc
Confidence 444467788888854
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=39.07 E-value=2e+02 Score=25.30 Aligned_cols=113 Identities=9% Similarity=-0.056 Sum_probs=56.1
Q ss_pred CceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecC--CCeEEEEeCC
Q 014875 178 KNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAE 253 (416)
Q Consensus 178 ~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~ 253 (416)
..|..++...+ ..+.-.. +|.|+.|-..... ...+..........|..++.. ....+.-..+
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~---d~~v~vwd~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQ---DRNAYVYEKRPDG-----------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp SCEEEEEECTTTCCEEEEET---TSSEEEC-----------------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred ceEEEEEEeCCCCEEEEEeC---CCeEEEEEcCCCC-----------ceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 35666665543 2333334 7899999443211 011111111122356666554 3355566778
Q ss_pred CcEEEeeCCCCCCCCCCCceecC--CCCCeeEEEecC--ceEEEEecCCCEEEeeCC
Q 014875 254 GHLYTWGRGFNSTSDVNCPQSLP--SSLSFSQAALGW--NHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 254 G~vy~wG~~~~~~~~~~~p~~~~--~~~~i~~i~~g~--~~~~~lt~~g~vy~~G~n 306 (416)
|.|+.|-........ ....+. ....|..++... ...+.-..||.|+.|-..
T Consensus 122 ~~i~iwd~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 122 RVISVCYFEQENDWW--VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SCEEECCC-----CC--CCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred CeEEEEEECCcccce--eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 999999553322111 112222 355677776643 345555778999999764
No 93
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=38.94 E-value=2e+02 Score=25.33 Aligned_cols=162 Identities=15% Similarity=0.102 Sum_probs=0.0
Q ss_pred EEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEec-----CCCeEEEEeCCCc
Q 014875 181 HQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISA-----NGDRSAALSAEGH 255 (416)
Q Consensus 181 ~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~-----g~~~~~~lt~~G~ 255 (416)
..++...++.+++|+ .|++|..-..+--..+.. ..-.+....+...++.+|+.+.. ...+.+++|++|.
T Consensus 47 ~~~~~~~~~ll~fT~---~G~~~~~~~~elp~~~~~---a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 120 (307)
T 1zi0_A 47 LLVANTHDHILCFSS---RGRVYSMKVYQLPEATRG---ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGT 120 (307)
T ss_dssp EEEEETTCEEEEEET---TSEEEEEEGGGSCCCCSS---SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred EEEECCCCEEEEEEC---CCEEEEEEhhHCcCCCCC---CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCe
Q ss_pred EEEeeCCCCCCCCCCCceec--CCCCCeeEEEe--cCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeec
Q 014875 256 LYTWGRGFNSTSDVNCPQSL--PSSLSFSQAAL--GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVS 331 (416)
Q Consensus 256 vy~wG~~~~~~~~~~~p~~~--~~~~~i~~i~~--g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~ 331 (416)
+.-.-...+......--..+ .....++.+.. +....+++|++|+++.+-..+--.+|..... ..-+.
T Consensus 121 ~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~G---------v~~i~ 191 (307)
T 1zi0_A 121 VKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG---------VRGIR 191 (307)
T ss_dssp EEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCC---------EECCC
T ss_pred EEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCC---------eEeEE
Q ss_pred cCCCCcEEEEec--CCCeeEEEECCCCE
Q 014875 332 NLDGVKVIQIAA--GAEHSAVVTENRAI 357 (416)
Q Consensus 332 ~~~~~~v~~i~~--G~~h~~~l~~~g~v 357 (416)
...+..|+.+.. ...+.++++++|.+
T Consensus 192 L~~~d~Vv~~~~~~~~~~ll~~T~~G~~ 219 (307)
T 1zi0_A 192 LGEGDKVVSLIVPRGDGAILTATQNGYG 219 (307)
T ss_dssp CCTTCCEEEEECCCSSCEEEEEETTSEE
T ss_pred eCCCCEEEEEEEecCCCEEEEEEcCCce
No 94
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=35.86 E-value=2e+02 Score=24.25 Aligned_cols=14 Identities=7% Similarity=0.138 Sum_probs=8.3
Q ss_pred EEEEEeCCCEEEEc
Q 014875 138 SGFVSDSGCLFTCG 151 (416)
Q Consensus 138 ~~~lt~~G~v~~~G 151 (416)
.++++.+|++|+..
T Consensus 211 ~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 211 GVGINSNGEILIAD 224 (286)
T ss_dssp EEEECTTCCEEEEE
T ss_pred EEEECCCCCEEEEe
Confidence 45556666666654
No 95
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=34.81 E-value=2.2e+02 Score=24.41 Aligned_cols=22 Identities=9% Similarity=0.398 Sum_probs=13.6
Q ss_pred eeEEEECCCCEEEEECCCCCCcc
Q 014875 347 HSAVVTENRAIMTWGWGEHGQLG 369 (416)
Q Consensus 347 h~~~l~~~g~vy~wG~n~~gqLG 369 (416)
+.+.++.+|++ .|=.+.....|
T Consensus 245 ~~~~~~~~g~~-~W~~~~~~~~~ 266 (276)
T 3no2_A 245 QLVEIDSEGKV-VWQLNDKVKFG 266 (276)
T ss_dssp SEEEECTTSBE-EEEECCTTTSC
T ss_pred eEEEECCCCCE-EEEecCccccc
Confidence 46667777765 56666555554
No 96
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=34.70 E-value=2.1e+02 Score=24.12 Aligned_cols=16 Identities=19% Similarity=0.376 Sum_probs=10.6
Q ss_pred eEEEEecCCCEEEeeC
Q 014875 290 HVLVLTGDGEVLMLGG 305 (416)
Q Consensus 290 ~~~~lt~~g~vy~~G~ 305 (416)
..++++.+|++|+-..
T Consensus 210 ~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 210 IGVGINSNGEILIADN 225 (286)
T ss_dssp EEEEECTTCCEEEEEC
T ss_pred cEEEECCCCCEEEEeC
Confidence 4566677777777654
No 97
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=34.33 E-value=2.3e+02 Score=24.64 Aligned_cols=71 Identities=7% Similarity=-0.196 Sum_probs=38.5
Q ss_pred CEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec--CceEEEEecCCCEEEeeCC
Q 014875 236 EIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG--WNHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 236 ~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g--~~~~~~lt~~g~vy~~G~n 306 (416)
.|..++.. ....++-..+|.|+.|-....................|..++.. ....+.-+.+|.++.|-..
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 45555543 34555567789998886533221000001111224567777664 3345555678999999743
No 98
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=33.53 E-value=2.6e+02 Score=24.94 Aligned_cols=162 Identities=12% Similarity=-0.060 Sum_probs=70.1
Q ss_pred ccEEEEeec---CceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeE
Q 014875 126 YTITHISAG---WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQV 202 (416)
Q Consensus 126 ~~i~~i~~G---~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~v 202 (416)
..|..++.. ....+.-..||.|..|-....++ +.....--...|..|+...+...+++. ..||.|
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-----------~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~~i 273 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR-----------AVRTYHGHEGDINSVKFFPDGQRFGTG-SDDGTC 273 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-----------CCEEECCCSSCCCEEEECTTSSEEEEE-CSSSCE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-----------ceEEECCcCCCeEEEEEecCCCeEEEE-cCCCeE
Confidence 446666553 23444446789999996432111 111111112346666655443233322 117889
Q ss_pred EEeCCCCCCCCCCCCCCcceeecCeE-ecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCe
Q 014875 203 YGFGSGKRGQLGVSKDRIRSVSLPQV-TIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSF 281 (416)
Q Consensus 203 y~wG~n~~gqlG~~~~~~~~~~~p~~-~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i 281 (416)
..|-.....++..- ...+.. .........+.++....+.++-..+|.|++|-..............-.....|
T Consensus 274 ~lwd~~~~~~~~~~------~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 274 RLFDMRTGHQLQVY------NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI 347 (380)
T ss_dssp EEEETTTTEEEEEE------CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC
T ss_pred EEEECCCCcEEEEe------cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce
Confidence 99854321111000 000000 00001112333344455666667899999996422111000000000123345
Q ss_pred eEEEecCc--eEEEEecCCCEEEeeC
Q 014875 282 SQAALGWN--HVLVLTGDGEVLMLGG 305 (416)
Q Consensus 282 ~~i~~g~~--~~~~lt~~g~vy~~G~ 305 (416)
..++...+ ..+.-..||.|..|-.
T Consensus 348 ~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 348 SCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEec
Confidence 55555432 3333345777777754
No 99
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=33.19 E-value=2.4e+02 Score=24.41 Aligned_cols=244 Identities=12% Similarity=0.059 Sum_probs=0.0
Q ss_pred CeeeecCCCCCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCce
Q 014875 58 PQLLNLSSLSSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWNH 137 (416)
Q Consensus 58 p~~i~~~~~~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~~ 137 (416)
|..........|..++......++++-+. |+.|..| +......+..+......|..++....-
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~---D~~v~~w--------------d~~~~~~~~~~~~h~~~v~~~~~~~~~ 119 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASW---DKTLRLW--------------DVATGETYQRFVGHKSDVMSVDIDKKA 119 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEET---TSEEEEE--------------ETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeC---CCEEEEE--------------ECCCCCeeEEEccCCCcEEEEEEcCCC
Q ss_pred EEEEE--eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC--------eEEEEEeccCCCeEEEeCC
Q 014875 138 SGFVS--DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR--------HSLVLLKDCLGNQVYGFGS 207 (416)
Q Consensus 138 ~~~lt--~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~--------hs~~lt~~~~~g~vy~wG~ 207 (416)
.++++ .||.|..|- ..........-....|..+..... ..+.-.. ++.|..|
T Consensus 120 ~~l~s~s~D~~i~vwd-------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~---d~~i~~w-- 181 (319)
T 3frx_A 120 SMIISGSRDKTIKVWT-------------IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN---DKMVKAW-- 181 (319)
T ss_dssp CEEEEEETTSCEEEEE-------------TTSCEEEEECCCSSCEEEEEECCC------CCEEEEEET---TSCEEEE--
T ss_pred CEEEEEeCCCeEEEEE-------------CCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC---CCEEEEE--
Q ss_pred CCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCCCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEe-
Q 014875 208 GKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANGDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAAL- 286 (416)
Q Consensus 208 n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~- 286 (416)
...................-..+.....+.+.-..+|.|..| .+.....+..+..
T Consensus 182 ----------d~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw--------------d~~~~~~~~~~~~~ 237 (319)
T 3frx_A 182 ----------NLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW--------------NLAAKKAMYTLSAQ 237 (319)
T ss_dssp ----------ETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE--------------ETTTTEEEEEEECC
T ss_pred ----------ECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE--------------ECCCCcEEEEecCC
Q ss_pred cCceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecCCC--eeEEEECCCCEEEE
Q 014875 287 GWNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAGAE--HSAVVTENRAIMTW 360 (416)
Q Consensus 287 g~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~--h~~~l~~~g~vy~w 360 (416)
..-.+++...+|...+.+....-.+-.-+......................+..++...+ +.+.-..||.|..|
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEE
No 100
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=32.00 E-value=1.7e+02 Score=25.41 Aligned_cols=16 Identities=19% Similarity=0.492 Sum_probs=11.8
Q ss_pred ceEEEEEeCCCEEEEcC
Q 014875 136 NHSGFVSDSGCLFTCGD 152 (416)
Q Consensus 136 ~~~~~lt~~G~v~~~G~ 152 (416)
.|+++. -+++||++|-
T Consensus 151 ~~~~~~-~~~~iyv~GG 166 (318)
T 2woz_A 151 GHNVIS-HNGMIYCLGG 166 (318)
T ss_dssp SCEEEE-ETTEEEEECC
T ss_pred ccEEEE-ECCEEEEEcC
Confidence 456555 6789999994
No 101
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=31.40 E-value=2.5e+02 Score=24.02 Aligned_cols=17 Identities=12% Similarity=0.167 Sum_probs=11.5
Q ss_pred ceEEEEecCCCEEEeeCC
Q 014875 289 NHVLVLTGDGEVLMLGGS 306 (416)
Q Consensus 289 ~~~~~lt~~g~vy~~G~n 306 (416)
.|++++. +++||.+|..
T Consensus 246 ~~~~~~~-~~~i~v~GG~ 262 (301)
T 2vpj_A 246 YVGATVL-RGRLYAIAGY 262 (301)
T ss_dssp SCEEEEE-TTEEEEECCB
T ss_pred ceeEEEE-CCEEEEEcCc
Confidence 4555544 7899999853
No 102
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=31.18 E-value=2.5e+02 Score=24.02 Aligned_cols=65 Identities=8% Similarity=0.031 Sum_probs=35.8
Q ss_pred CEEEEecCC--CeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEec-CceEEEEecCCCEEEeeC
Q 014875 236 EIVGISANG--DRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALG-WNHVLVLTGDGEVLMLGG 305 (416)
Q Consensus 236 ~i~~i~~g~--~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g-~~~~~~lt~~g~vy~~G~ 305 (416)
.|..++... ...+.-..+|.|..|-...... ...+.....|..+... ....++...++.|+.|-.
T Consensus 217 ~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH-----LYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDL 284 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTEE-----EEEEECSSCEEEEEECSSSSEEEEEETTEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEeccCce-----eeeecCCceEEeeecCCCCceeeccCCCEEEEEEC
Confidence 466555433 3444556789999996532211 1122233455555443 334555667888888854
No 103
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=29.82 E-value=1.4e+02 Score=26.59 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=12.9
Q ss_pred CCeEEEEEeccCCCeEEEeCC
Q 014875 187 MRHSLVLLKDCLGNQVYGFGS 207 (416)
Q Consensus 187 ~~hs~~lt~~~~~g~vy~wG~ 207 (416)
..|+++. . +++||++|-
T Consensus 110 ~~~~~~~-~---~~~iyv~GG 126 (357)
T 2uvk_A 110 AGHVTFV-H---NGKAYVTGG 126 (357)
T ss_dssp SSEEEEE-E---TTEEEEEEC
T ss_pred ccceEEE-E---CCEEEEEeC
Confidence 4576666 5 699999984
No 104
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=29.57 E-value=2.8e+02 Score=24.15 Aligned_cols=207 Identities=13% Similarity=0.056 Sum_probs=96.0
Q ss_pred EeeecCCCcccEEEEee-----cC-c--eEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC
Q 014875 117 PVTFFDGHRYTITHISA-----GW-N--HSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR 188 (416)
Q Consensus 117 ~v~~~~~~~~~i~~i~~-----G~-~--~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~ 188 (416)
....+.++...|..|+. .. . ..+.-..||.|..|-.....+.+ ....|.....--...|..++...+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~-----~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG-----YFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS-----BSEEEEEEECCCSSCEEEEEECSS
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc-----ccccccchhccCCCceEEEEECCC
Confidence 34445555567888876 21 2 23333568889999643211100 001111111111235777776554
Q ss_pred eEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCC
Q 014875 189 HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNST 266 (416)
Q Consensus 189 hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~ 266 (416)
..++++. ..|+.|..|-.... + ....+.. ....|..++.. ..+.+.-..+|.|..|-......
T Consensus 88 ~~~l~s~-s~D~~v~lwd~~~~-~------------~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~ 152 (343)
T 2xzm_R 88 NCFAISS-SWDKTLRLWDLRTG-T------------TYKRFVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK 152 (343)
T ss_dssp TTEEEEE-ETTSEEEEEETTSS-C------------EEEEEEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE
T ss_pred CCEEEEE-cCCCcEEEEECCCC-c------------EEEEEcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce
Confidence 4333332 11789999953221 0 0011111 12245555543 34555667899999996531100
Q ss_pred CCCCCceecCCCCCeeEEEecC------------ceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCC
Q 014875 267 SDVNCPQSLPSSLSFSQAALGW------------NHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLD 334 (416)
Q Consensus 267 ~~~~~p~~~~~~~~i~~i~~g~------------~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~ 334 (416)
. ...........|..+.... ...+....||.|..|-.+. ++ ...+.. .
T Consensus 153 ~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~---------------~~~~~~-h 212 (343)
T 2xzm_R 153 F--SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QI---------------RYTFKA-H 212 (343)
T ss_dssp E--ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EE---------------EEEEEC-C
T ss_pred e--eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ce---------------eEEEcC-c
Confidence 0 0000001122344444322 3455667789999996210 00 011111 1
Q ss_pred CCcEEEEecCC--CeeEEEECCCCEEEEECC
Q 014875 335 GVKVIQIAAGA--EHSAVVTENRAIMTWGWG 363 (416)
Q Consensus 335 ~~~v~~i~~G~--~h~~~l~~~g~vy~wG~n 363 (416)
...|..++... .+.+.-..||.|+.|-..
T Consensus 213 ~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 213 ESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred cccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 12455555433 333444678888888763
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=26.73 E-value=3.3e+02 Score=23.94 Aligned_cols=251 Identities=8% Similarity=0.016 Sum_probs=117.6
Q ss_pred CCeEEEEeCC---cceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC-----ceE
Q 014875 67 SSVSMLACGG---AHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW-----NHS 138 (416)
Q Consensus 67 ~~i~~ia~G~---~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~-----~~~ 138 (416)
..|..++... ...+.-.. +|.|..|-..... +....... ..+..+.... ...
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~~ 159 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSF-----DKTLKVWDTNTLQ------------TADVFNFE---ETVYSHHMSPVSTKHCLV 159 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEET-----TSEEEEEETTTTE------------EEEEEECS---SCEEEEEECSSCSSCCEE
T ss_pred CcEEEEEEccCCCcEEEEEeC-----CCeEEEeeCCCCc------------cceeccCC---CceeeeEeecCCCCCcEE
Confidence 4788887643 34444455 8999999653211 11111111 2344444332 245
Q ss_pred EEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCCe--EEEEEeccCCCeEEEeCCCCCCCCCCC
Q 014875 139 GFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRH--SLVLLKDCLGNQVYGFGSGKRGQLGVS 216 (416)
Q Consensus 139 ~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~h--s~~lt~~~~~g~vy~wG~n~~gqlG~~ 216 (416)
++-..+|.|+.|-...... ...+.. ....|..++...+. .++.... +|.|+.|-.......-..
T Consensus 160 ~~~~~~~~v~~~d~~~~~~-----------~~~~~~-~~~~v~~~~~~~~~~~ll~~~~~--dg~i~i~d~~~~~~~~~~ 225 (408)
T 4a11_B 160 AVGTRGPKVQLCDLKSGSC-----------SHILQG-HRQEILAVSWSPRYDYILATASA--DSRVKLWDVRRASGCLIT 225 (408)
T ss_dssp EEEESSSSEEEEESSSSCC-----------CEEECC-CCSCEEEEEECSSCTTEEEEEET--TSCEEEEETTCSSCCSEE
T ss_pred EEEcCCCeEEEEeCCCcce-----------eeeecC-CCCcEEEEEECCCCCcEEEEEcC--CCcEEEEECCCCCccccc
Confidence 5557889999996532111 111211 12457777665443 2333332 899999954332110000
Q ss_pred C--CCcceeecCeEecccCCCCEEEEecC--CCeEEEEeCCCcEEEeeCCCCCCCCCCCceec---CCCCCeeEEEecCc
Q 014875 217 K--DRIRSVSLPQVTIGLHDIEIVGISAN--GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSL---PSSLSFSQAALGWN 289 (416)
Q Consensus 217 ~--~~~~~~~~p~~~~~~~~~~i~~i~~g--~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~---~~~~~i~~i~~g~~ 289 (416)
. ........+..........|..++.. ..+.++...+|.|+.|-............... .....+........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (408)
T 4a11_B 226 LDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSS 305 (408)
T ss_dssp CCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSS
T ss_pred ccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCc
Confidence 0 00000000000001122356666554 34566677899999997654332211111111 11122222223345
Q ss_pred eEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEEecC--CCeeEEEECCCCEEEEECCCCCC
Q 014875 290 HVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQIAAG--AEHSAVVTENRAIMTWGWGEHGQ 367 (416)
Q Consensus 290 ~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G--~~h~~~l~~~g~vy~wG~n~~gq 367 (416)
..++...++.|+.|-...... ...+... ...|..++.. ..+.+.-..||.|+.|=....-.
T Consensus 306 ~~~~~~~~~~i~v~d~~~~~~----------------~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 306 EFVFVPYGSTIAVYTVYSGEQ----------------ITMLKGH-YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp CEEEEEETTEEEEEETTTCCE----------------EEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred eEEEEecCCEEEEEECcCCcc----------------eeeeccC-CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 566667789999996542111 1111111 1245555543 34455566799999998765443
Q ss_pred c
Q 014875 368 L 368 (416)
Q Consensus 368 L 368 (416)
+
T Consensus 369 ~ 369 (408)
T 4a11_B 369 V 369 (408)
T ss_dssp -
T ss_pred c
Confidence 3
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=26.71 E-value=3.5e+02 Score=24.33 Aligned_cols=119 Identities=8% Similarity=-0.050 Sum_probs=56.5
Q ss_pred CCCeEEEEeCCcce--EEeeCCCcccCCeEEEEecC--CCCccCCCCCCCeeceeEeeec--CC--CcccEEEEeec---
Q 014875 66 LSSVSMLACGGAHV--LALTSPSSVIGGKVFSWGRG--SSGQLGHGEMVDALYPKPVTFF--DG--HRYTITHISAG--- 134 (416)
Q Consensus 66 ~~~i~~ia~G~~h~--~~lt~~~~~~~g~vy~wG~n--~~gqlG~~~~~~~~~p~~v~~~--~~--~~~~i~~i~~G--- 134 (416)
...|..|+...... +.-.. ||.|..|-.. ..+++- .......+..+ .. ....+..+..-
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~-----dg~i~vwd~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSK-----DGQIIVLKVNHYQQESEV-----KFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSEEEEEEEEEEEETTEE-----EEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred CCCEEEEEEeCCCCEEEEEeC-----CCEEEEEEeccccCCcee-----eccccceeEEEEccCcccccCceEEEEEEcC
Confidence 45788888755332 33344 8999999642 122110 01111111111 00 11334554422
Q ss_pred -CceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeec-CCCceEEEEeCCCe-EEEEEeccCCCeEEEeCC
Q 014875 135 -WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIACGMRH-SLVLLKDCLGNQVYGFGS 207 (416)
Q Consensus 135 -~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~-~~~~i~~i~~G~~h-s~~lt~~~~~g~vy~wG~ 207 (416)
....+.-+.+|.|+.|-...... ...+... ....|..++...+. .++.... +|.|..|-.
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~-----------~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLER-----------LQIIENSPRHGAVSSICIDEECCVLILGTT--RGIIDIWDI 243 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCE-----------EEEEECCGGGCCEEEEEECTTSCEEEEEET--TSCEEEEET
T ss_pred CCCEEEEEeCCCeEEEEeCCCCee-----------eEEEccCCCCCceEEEEECCCCCEEEEEcC--CCeEEEEEc
Confidence 34455556788899986432110 1111111 12467777765433 2333332 889999943
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=26.63 E-value=2.9e+02 Score=23.36 Aligned_cols=123 Identities=7% Similarity=-0.134 Sum_probs=63.5
Q ss_pred CCeEEEEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC----ceEEEEE
Q 014875 67 SSVSMLACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW----NHSGFVS 142 (416)
Q Consensus 67 ~~i~~ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~----~~~~~lt 142 (416)
..|..|+......++++.+. ||.|..|-..... .....+..+......|..++... ...+...
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSS---DQHIKVFKLDKDT----------SNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp SCEEEEEECSSSSEEEEEET---TSEEEEEEECSSS----------CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred cceeEEEEcCCCCEEEEeeC---CCeEEEEECCCCC----------CcceecceeccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 46777776544333332211 8999999754311 11122333333335677777643 4455557
Q ss_pred eCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeCCC----eEEEEEeccCCCeEEEeCCC
Q 014875 143 DSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMR----HSLVLLKDCLGNQVYGFGSG 208 (416)
Q Consensus 143 ~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~----hs~~lt~~~~~g~vy~wG~n 208 (416)
.||.|..|-........ ......+..........|..++...+ ..+.... +|.|+.|=..
T Consensus 79 ~dg~v~vwd~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~ 142 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEEC---SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDAL 142 (351)
T ss_dssp TTSCEEEEEECTTSCTT---SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECS
T ss_pred CCCeEEEEecCCCcccc---cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCC
Confidence 88999999754321100 00011111111112356888877654 3334445 8999999543
No 108
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=26.25 E-value=3.3e+02 Score=23.82 Aligned_cols=139 Identities=12% Similarity=-0.051 Sum_probs=66.1
Q ss_pred CCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecC--ceEEEEEeCCCEEEEcCCCCccccCCCCCCcc
Q 014875 90 GGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGW--NHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHS 167 (416)
Q Consensus 90 ~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~--~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~ 167 (416)
|+.|+.|-.... .+..+..+......|..++... .+.+.-..||.|+.|-..... ..
T Consensus 32 d~~i~iw~~~~~------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~---------~~ 90 (377)
T 3dwl_C 32 TNQVELYEQDGN------------GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG---------TW 90 (377)
T ss_dssp SSCBCEEEEETT------------EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---------------CC
T ss_pred CCEEEEEEccCC------------ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC---------ce
Confidence 677777754321 1133333333334566665543 344555678899998643311 01
Q ss_pred cceEeeecCCCceEEEEeCCC--eEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEecccCCCCEEEEecCC-
Q 014875 168 SPVKVSSFVNKNVHQIACGMR--HSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGLHDIEIVGISANG- 244 (416)
Q Consensus 168 ~p~~v~~~~~~~i~~i~~G~~--hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~~~~~i~~i~~g~- 244 (416)
.+.....-....|..++...+ ..+.-.. ++.|+.|=...... ......+.......|..++...
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~----------~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVISVCYFEQEND----------WWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEES---SSCEEECCC---------------CCCCEEECSSCCSCEEEEEECTT
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEec---CCeEEEEEECCccc----------ceeeeEeecccCCCeEEEEEcCC
Confidence 111111112245777765433 3333444 78999984332110 0011222221233566666543
Q ss_pred -CeEEEEeCCCcEEEeeCC
Q 014875 245 -DRSAALSAEGHLYTWGRG 262 (416)
Q Consensus 245 -~~~~~lt~~G~vy~wG~~ 262 (416)
...+.-..+|.|+.|-..
T Consensus 158 ~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SSEEEEEESSSCEEEEEEC
T ss_pred CCEEEEEeCCCEEEEEEEE
Confidence 345556788999999764
No 109
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=25.95 E-value=3.2e+02 Score=23.59 Aligned_cols=200 Identities=13% Similarity=0.019 Sum_probs=109.6
Q ss_pred CceEEEEEeCCCEEEEcCCCCccccCCCCCCcccceEeeecCCCceEEEEeC---CCeEEEEEeccCCCeEEEeCCCCCC
Q 014875 135 WNHSGFVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACG---MRHSLVLLKDCLGNQVYGFGSGKRG 211 (416)
Q Consensus 135 ~~~~~~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~hs~~lt~~~~~g~vy~wG~n~~g 211 (416)
..+.+++|++|++|.--.. +|...... . + ...+++|+.+.+- ....+++|+ +|.+.-.-..++-
T Consensus 35 ~~~ll~fT~~G~v~~~~~~---~lp~~~~~---~---l-l~~~e~i~~v~~~~~~~~~~v~~T~---~G~iKr~~l~~~~ 101 (276)
T 3no0_A 35 TEGLFLVSNRGRVYWIAGS---QALQGSKV---S---L-KSREEKIVGAFIREKFGNRLLLATK---KGYVKKIPLAEFE 101 (276)
T ss_dssp TSCEEEEETTSEEEEECSH---HHHTSEEC---C---C-SSTTCCEEEEEEGGGSCSEEEEEET---TSEEEEEEGGGTT
T ss_pred CCEEEEEcCCCeEEEEEhh---hCccCccc---c---c-CCCCCEEEEEECCcCCCCEEEEEeC---CCEEEEEEHHHhh
Confidence 4568899999999965422 12111000 0 2 2246778888762 245777788 8988877544442
Q ss_pred CCCCCCCCcceeecCeEeccc-CCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCCC-----CCCCceecCCCCCeeE
Q 014875 212 QLGVSKDRIRSVSLPQVTIGL-HDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNSTS-----DVNCPQSLPSSLSFSQ 283 (416)
Q Consensus 212 qlG~~~~~~~~~~~p~~~~~~-~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~~-----~~~~p~~~~~~~~i~~ 283 (416)
+-.. -.....+ ++..++.+.. +....+++|++|++|.+-....... |... ..+..++.|+.
T Consensus 102 ~~~~----------G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~-i~L~~~d~vv~ 170 (276)
T 3no0_A 102 YKAQ----------GMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQG-IKLEKNDETSG 170 (276)
T ss_dssp TCST----------TEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC-CCCCTTCCEEE
T ss_pred hhcC----------CeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEE-EccCCCCEEEE
Confidence 1100 1111111 2234444433 4557899999999999865332221 1111 12345677777
Q ss_pred EEec--CceEEEEecCCCEEEeeCCCCCCCCCCCCCcccCccccceeeeccCCCCcEEEE--ecCCCeeEEEECCCCEEE
Q 014875 284 AALG--WNHVLVLTGDGEVLMLGGSHHGMLSDPERVSSTRPLSVALEKVSNLDGVKVIQI--AAGAEHSAVVTENRAIMT 359 (416)
Q Consensus 284 i~~g--~~~~~~lt~~g~vy~~G~n~~gqlG~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--~~G~~h~~~l~~~g~vy~ 359 (416)
+... ....+++|+.|.+.-.-..++-..+.+..... .+ ..+..++.+ ..+.+..++++++|++..
T Consensus 171 ~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~---------~i--~~~~~lv~~~~~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 171 LRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTE---------VS--GTKDTLVDLIPIKEEVELLITTKNGKAFY 239 (276)
T ss_dssp EEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEE---------CC--CSSSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred EEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceE---------EE--cCCCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence 6554 34678889999887776555443333211100 00 111133333 245678889999999988
Q ss_pred --EECCCCCCcc
Q 014875 360 --WGWGEHGQLG 369 (416)
Q Consensus 360 --wG~n~~gqLG 369 (416)
+-.++--.+|
T Consensus 240 ~~~~~~~i~~~~ 251 (276)
T 3no0_A 240 DKINQKDIPLST 251 (276)
T ss_dssp EEEEGGGSCBCC
T ss_pred eeeCHHHCCCcC
Confidence 7655544444
No 110
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.91 E-value=3.7e+02 Score=23.63 Aligned_cols=218 Identities=11% Similarity=0.037 Sum_probs=111.1
Q ss_pred CCeEE--EEeCCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeec-----CceEE
Q 014875 67 SSVSM--LACGGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAG-----WNHSG 139 (416)
Q Consensus 67 ~~i~~--ia~G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G-----~~~~~ 139 (416)
..+.. ++....+.+++|+ .|++|..-...--..+.... -......+.+.++ .+|+.+... ..+.+
T Consensus 47 D~l~~~~~~~~~~~ll~~T~-----~G~~~~~~~~~ip~~~r~~~-G~~i~~~l~l~~~--e~i~~~~~~~~~~~~~~ll 118 (312)
T 1suu_A 47 DEIVIALCVNTHDYLFMISN-----EGKLYLINAYEIKDSSRASK-GQNISELINLGDQ--EEILTIKNSKDLTDDAYLL 118 (312)
T ss_dssp CCEEEEEEEETTCEEEEEET-----TSEEEEEEGGGSCC--------CBGGGTSCCCTT--CCEEEEEEESCCCTTCEEE
T ss_pred CEEEEEEEECCCCEEEEEEC-----CCeEEEEEHHHCCCCCccCC-CcChhhccCCCCC--CEEEEEEEeccCCCCCEEE
Confidence 34444 4456677889999 99999987543211111110 0111112233333 556666554 35688
Q ss_pred EEEeCCCEEEEcCCCCccccCCCCCCcccceEeeec-CCCceEEEE--eCCCeEEEEEeccCCCeEEEeCCCCCCCCCCC
Q 014875 140 FVSDSGCLFTCGDGTFGQLGHGDYRSHSSPVKVSSF-VNKNVHQIA--CGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVS 216 (416)
Q Consensus 140 ~lt~~G~v~~~G~n~~gqlG~~~~~~~~~p~~v~~~-~~~~i~~i~--~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~ 216 (416)
++|++|.++-.-...+-.. ...-.....+ .+..++.+. .+..+.+++|+ +|.+.-+-..+.-.+|+.
T Consensus 119 ~~T~~G~~kr~~l~~~~~~-------r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~---~G~~~r~~~~ev~~~gR~ 188 (312)
T 1suu_A 119 LTTASGKIARFESTDFKAV-------KSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSK---KGSAFIFNSRDVRLTNRG 188 (312)
T ss_dssp EEETTSEEEEEEGGGGCC-----------CEECBCCCTTCCEEEEEEECTTCEEEEEET---TSEEEEEEGGGSCBCCTT
T ss_pred EEeCCCeEEEEEHHHhhcc-------CCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeC---CCcEEEEEHHHccccCCC
Confidence 8899999997764433110 0011111112 234555544 34567788888 899998876665455543
Q ss_pred CCCcceeecCeEecccCCCCEEEEec--CCCeEEEEeCCCcEEEeeCCCCCC-----CCCCCceec-CCCCCeeEE--Ee
Q 014875 217 KDRIRSVSLPQVTIGLHDIEIVGISA--NGDRSAALSAEGHLYTWGRGFNST-----SDVNCPQSL-PSSLSFSQA--AL 286 (416)
Q Consensus 217 ~~~~~~~~~p~~~~~~~~~~i~~i~~--g~~~~~~lt~~G~vy~wG~~~~~~-----~~~~~p~~~-~~~~~i~~i--~~ 286 (416)
.........+ ++..++.+.. ...+.++++++|.+...-...+.. .|....... .....++.+ ..
T Consensus 189 ~~Gv~~i~L~------~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~ 262 (312)
T 1suu_A 189 TQGVCGMKLK------EGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYTSYKKSDKKAGSVVDAIAVS 262 (312)
T ss_dssp BCCEECCCCC------TTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEECSCTTCTTTCSEEEEEEEC
T ss_pred CCCeEeEEeC------CCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCCCCEEeeEccCCCCCeEEEEEEeC
Confidence 2111111111 2334555432 345678888888877665543322 122221111 122344432 22
Q ss_pred cCceEEEEecCCCEEEeeCCCC
Q 014875 287 GWNHVLVLTGDGEVLMLGGSHH 308 (416)
Q Consensus 287 g~~~~~~lt~~g~vy~~G~n~~ 308 (416)
.....++++..|++...-..+.
T Consensus 263 ~~~~l~~~t~~g~~~r~~~~~i 284 (312)
T 1suu_A 263 EDDEILLVSKRSKALRTVAGKV 284 (312)
T ss_dssp TTCEEEEEETTCEEEEEEGGGS
T ss_pred CCCEEEEEeCCCeEEEEEcccC
Confidence 5566778888887776555443
No 111
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=22.67 E-value=3.7e+02 Score=23.09 Aligned_cols=17 Identities=6% Similarity=-0.038 Sum_probs=11.8
Q ss_pred eeEEEECCCC-EEEEECC
Q 014875 347 HSAVVTENRA-IMTWGWG 363 (416)
Q Consensus 347 h~~~l~~~g~-vy~wG~n 363 (416)
+.+++..+|+ +|+-...
T Consensus 317 ~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 317 NSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEECTTSCEEEEEEEC
T ss_pred CeEEEcCCCCEEEEEEcc
Confidence 5677888887 7765544
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=20.92 E-value=3.7e+02 Score=22.52 Aligned_cols=145 Identities=10% Similarity=0.074 Sum_probs=67.2
Q ss_pred CCcceEEeeCCCcccCCeEEEEecCCCCccCCCCCCCeeceeEeeecCCCcccEEEEeecCc--eEEEEEeCCCEEEEcC
Q 014875 75 GGAHVLALTSPSSVIGGKVFSWGRGSSGQLGHGEMVDALYPKPVTFFDGHRYTITHISAGWN--HSGFVSDSGCLFTCGD 152 (416)
Q Consensus 75 G~~h~~~lt~~~~~~~g~vy~wG~n~~gqlG~~~~~~~~~p~~v~~~~~~~~~i~~i~~G~~--~~~~lt~~G~v~~~G~ 152 (416)
.....+++.. |+.|+.|=... |+ ...+..+......|..|+.... +.+.-..||.|..|-.
T Consensus 34 S~~~~lAvg~-----D~tV~iWd~~t-g~-----------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 34 SSGNVLAVAL-----DNSVYLWSASS-GD-----------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96 (318)
T ss_dssp CTTSEEEEEE-----TTEEEEEETTT-CC-----------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEe-----CCEEEEEECCC-CC-----------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeec
Confidence 3445666666 89999995432 21 1111122222234666655443 3444467888999864
Q ss_pred CCCccccCCCCCCcccceEeeecCCCceEEEEeCCCeEEEEEeccCCCeEEEeCCCCCCCCCCCCCCcceeecCeEeccc
Q 014875 153 GTFGQLGHGDYRSHSSPVKVSSFVNKNVHQIACGMRHSLVLLKDCLGNQVYGFGSGKRGQLGVSKDRIRSVSLPQVTIGL 232 (416)
Q Consensus 153 n~~gqlG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~hs~~lt~~~~~g~vy~wG~n~~gqlG~~~~~~~~~~~p~~~~~~ 232 (416)
.....+ ..+.. ....+..++......+.-.. ++.+..|-...... .........
T Consensus 97 ~~~~~~-----------~~~~~-h~~~~~~~~~~~~~l~s~~~---~~~~~~~~~~~~~~-----------~~~~~~~~~ 150 (318)
T 4ggc_A 97 QQQKRL-----------RNMTS-HSARVGSLSWNSYILSSGSR---SGHIHHHDVRVAEH-----------HVATLSGHS 150 (318)
T ss_dssp TTTEEE-----------EEEEC-CSSCEEEEEEETTEEEEEET---TSEEEEEETTSSSC-----------EEEEEECCS
T ss_pred CCceeE-----------EEecC-ccceEEEeecCCCEEEEEec---CCceEeeecCCCce-----------eEEEEcCcc
Confidence 331111 11111 11234445444443333344 67777664322110 000011111
Q ss_pred CCCCEEEEecCCCeEEEEeCCCcEEEeeCC
Q 014875 233 HDIEIVGISANGDRSAALSAEGHLYTWGRG 262 (416)
Q Consensus 233 ~~~~i~~i~~g~~~~~~lt~~G~vy~wG~~ 262 (416)
.............+.+.-..+|.|..|-..
T Consensus 151 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred CceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 111222233344556666789999999653
No 113
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=20.09 E-value=4.5e+02 Score=23.13 Aligned_cols=57 Identities=18% Similarity=0.062 Sum_probs=27.6
Q ss_pred CCeEEEEeCCCcEEEeeCCCCCCCCCCCceecCCCCCeeEEEecCceEEEEecCCCEEEe
Q 014875 244 GDRSAALSAEGHLYTWGRGFNSTSDVNCPQSLPSSLSFSQAALGWNHVLVLTGDGEVLML 303 (416)
Q Consensus 244 ~~~~~~lt~~G~vy~wG~~~~~~~~~~~p~~~~~~~~i~~i~~g~~~~~~lt~~g~vy~~ 303 (416)
....++.+.+|.||++-......+. ...+....-...........++.+.+|.||++
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~---~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~ 374 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVA---QQKVDSSGFQTEPVAADGKLLIQAKDGTVYSI 374 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEE---EEECCTTCBCSCCEEETTEEEEEBTTSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEE---EEecCCCcceeCCEEECCEEEEEeCCCEEEEE
Confidence 3455666677778877543211100 00111111111112235567777888888876
Done!