Query 014877
Match_columns 416
No_of_seqs 112 out of 146
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 19:25:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qqy_A Sigma B operon; dodecam 96.6 0.0039 1.3E-07 50.4 6.1 141 135-281 7-148 (149)
2 2fzf_A Hypothetical protein; s 96.4 0.0054 1.8E-07 52.4 6.5 127 139-276 21-160 (175)
3 2oh3_A Rubrerythrin, COG1633: 96.2 0.0061 2.1E-07 52.0 5.7 132 139-276 6-148 (167)
4 1vjx_A Putative ferritin-like 96.2 0.006 2.1E-07 51.8 5.2 126 139-275 15-154 (157)
5 1nfv_A Bacterioferritin; 24 su 95.4 0.03 1E-06 47.6 6.4 137 135-276 8-145 (179)
6 1mxr_A Ribonucleotide reductas 95.0 0.011 3.8E-07 57.6 3.1 135 134-271 188-350 (375)
7 2y3q_A Bacterioferritin; metal 95.0 0.029 9.8E-07 46.0 5.1 135 137-276 5-140 (158)
8 4dr0_A Ribonucleoside-diphosph 94.7 0.038 1.3E-06 53.8 5.9 126 130-271 165-322 (350)
9 3qb9_A Bacterioferritin, BFR; 93.9 0.094 3.2E-06 44.2 5.9 135 137-276 7-142 (174)
10 1jgc_A Bacterioferritin, BFR; 93.9 0.06 2.1E-06 44.2 4.5 135 137-276 5-140 (161)
11 2fkz_A Bacterioferritin; ferro 93.6 0.096 3.3E-06 42.4 5.3 135 137-276 5-140 (155)
12 3uoi_A Bacterioferritin, BFR; 92.5 0.12 4.2E-06 42.7 4.5 131 137-276 7-142 (161)
13 1jk0_B RNR Y4, ribonucleoside- 91.2 0.13 4.5E-06 49.8 3.7 111 151-271 191-317 (345)
14 1zpy_A Hypothetical protein NE 91.1 0.094 3.2E-06 43.9 2.2 69 124-196 6-74 (95)
15 3ee4_A Probable ribonucleoside 90.2 1.5 5.2E-05 42.2 10.0 189 126-340 53-294 (323)
16 2vzb_A Putative bacterioferrit 90.0 0.67 2.3E-05 38.3 6.5 136 136-276 15-159 (170)
17 1syy_A Ribonucleoside-diphosph 90.0 0.2 6.8E-06 48.3 3.7 53 136-190 178-235 (346)
18 2rcc_A Ribonucleoside-diphosph 89.9 0.15 5E-06 49.1 2.7 55 138-194 174-232 (346)
19 2e0z_A Virus-like particle; ba 89.6 0.064 2.2E-06 52.8 0.0 52 137-190 18-70 (345)
20 3pvt_A Phenylacetic acid degra 89.4 0.21 7.2E-06 48.6 3.4 189 128-331 22-236 (311)
21 4am5_A Bacterioferritin; metal 89.4 0.56 1.9E-05 39.5 5.6 134 137-275 5-139 (159)
22 2vxx_A Starvation induced DNA 89.3 0.99 3.4E-05 39.4 7.3 149 129-280 19-175 (192)
23 1jk0_A RNR Y2, ribonucleoside- 89.1 1 3.4E-05 45.3 8.1 111 151-271 263-390 (419)
24 2c41_A DPS family DNA-binding 88.7 0.75 2.6E-05 38.7 5.9 148 130-282 2-158 (158)
25 3gvy_A Bacterioferritin; iron 88.5 0.99 3.4E-05 37.3 6.4 133 138-276 6-140 (161)
26 2o1z_A Ribonucleotide reductas 88.1 0.16 5.3E-06 48.7 1.5 43 151-195 196-238 (311)
27 1vjx_A Putative ferritin-like 88.0 0.24 8.2E-06 41.9 2.5 55 139-195 101-155 (157)
28 2p1i_A Ribonucleotide reductas 88.0 4.1 0.00014 39.5 11.3 214 126-353 75-313 (349)
29 3ee4_A Probable ribonucleoside 87.3 0.17 6E-06 48.6 1.3 39 151-191 181-220 (323)
30 4etr_A Putative uncharacterize 87.1 0.35 1.2E-05 41.3 2.9 72 129-202 2-73 (153)
31 3fvb_A Bacterioferritin; niaid 87.0 0.94 3.2E-05 39.1 5.6 136 136-276 25-161 (182)
32 3pf7_A Benzoyl-COA oxygenase c 87.0 0.24 8.4E-06 51.1 2.2 179 126-320 96-318 (481)
33 2rcc_A Ribonucleoside-diphosph 87.0 5.5 0.00019 38.2 11.4 208 126-347 65-309 (346)
34 3k6c_A Uncharacterized protein 86.6 0.27 9.4E-06 41.2 1.9 66 126-195 8-73 (95)
35 1j30_A 144AA long hypothetical 86.0 1.2 4.2E-05 37.1 5.6 127 139-276 9-139 (144)
36 2p1i_A Ribonucleotide reductas 85.9 0.26 8.9E-06 47.8 1.7 43 151-195 197-239 (349)
37 2oh3_A Rubrerythrin, COG1633: 85.3 0.41 1.4E-05 40.6 2.4 54 139-194 94-147 (167)
38 2o1z_A Ribonucleotide reductas 85.3 6.8 0.00023 37.4 11.1 206 126-347 74-305 (311)
39 1za0_A Possible acyl-[acyl-car 84.9 0.27 9.1E-06 47.3 1.2 43 149-193 158-200 (275)
40 1h0o_A Ribonucleoside-diphosph 84.7 0.89 3E-05 45.1 4.9 42 151-194 238-279 (390)
41 3mjo_A Ribonucleotide reductas 84.6 0.31 1E-05 46.3 1.5 37 151-189 172-208 (296)
42 3dhz_A Ribonucleotide reductas 83.6 0.35 1.2E-05 46.5 1.4 37 151-189 173-209 (329)
43 3n37_A Ribonucleoside-diphosph 83.4 0.37 1.3E-05 46.1 1.5 37 151-189 163-199 (319)
44 3pwf_A Rubrerythrin; non heme 83.2 0.74 2.5E-05 40.8 3.3 114 140-276 8-126 (170)
45 1yuz_A Nigerythrin; rubrythrin 83.1 1.6 5.5E-05 39.5 5.4 131 140-276 30-162 (202)
46 3olj_A Ribonucleoside-diphosph 82.2 8.6 0.00029 36.1 10.2 207 126-347 50-282 (286)
47 4a58_A Ribonucleoside-diphosph 80.0 0.57 2E-05 45.1 1.5 37 151-189 181-217 (324)
48 3olj_A Ribonucleoside-diphosph 79.4 2.2 7.4E-05 40.2 5.1 49 142-194 166-214 (286)
49 1krq_A Ferritin; H-chain like 79.2 4.3 0.00015 34.7 6.6 135 138-276 5-140 (167)
50 3r2k_A Bacterioferritin, BFR; 78.8 4.7 0.00016 33.0 6.4 132 137-276 5-140 (154)
51 4di0_A Rubrerythrin; ssgcid, s 78.3 2.4 8.4E-05 36.4 4.7 123 139-275 13-140 (144)
52 2fzf_A Hypothetical protein; s 77.7 1.1 3.7E-05 38.1 2.3 55 139-195 106-160 (175)
53 2uw1_A Desaturase, plastid del 75.9 0.82 2.8E-05 45.3 1.2 45 150-194 171-216 (338)
54 2jd6_0 Ferritin homolog, ferri 73.8 7.3 0.00025 32.8 6.5 134 138-275 5-139 (174)
55 1eum_A Ferritin 1; ECFTNA, met 72.8 8.2 0.00028 32.8 6.6 135 138-276 5-140 (165)
56 1h0o_A Ribonucleoside-diphosph 72.1 23 0.0008 35.0 10.5 214 126-353 115-354 (390)
57 1jk0_A RNR Y2, ribonucleoside- 71.0 25 0.00087 35.2 10.6 213 126-352 140-379 (419)
58 2uw1_A Desaturase, plastid del 70.4 2.3 7.7E-05 42.2 2.8 55 230-284 85-143 (338)
59 1za0_A Possible acyl-[acyl-car 68.5 2.6 8.7E-05 40.5 2.7 37 250-286 94-134 (275)
60 3oj5_A Ferritin family protein 67.5 11 0.00038 32.5 6.3 135 138-276 10-145 (189)
61 2r2i_A Guanylyl cyclase-activa 67.3 8.2 0.00028 31.7 5.2 75 100-177 88-169 (198)
62 1jfj_A Ehcabp, calcium-binding 66.6 15 0.00052 27.1 6.1 85 94-181 30-119 (134)
63 3e3r_A Calcyphosin, calcyphosi 66.5 14 0.00049 30.0 6.5 71 93-165 66-136 (204)
64 4di0_A Rubrerythrin; ssgcid, s 66.1 2.4 8.2E-05 36.5 1.8 56 140-195 84-141 (144)
65 1s3q_A Ferritin; ferroxidase, 65.1 9 0.00031 33.2 5.3 135 137-275 6-141 (173)
66 2ggz_A Guanylyl cyclase-activa 64.5 9.8 0.00034 32.0 5.3 64 112-176 103-172 (211)
67 1fpw_A Yeast frequenin, calciu 63.8 11 0.00037 30.3 5.2 65 112-177 109-185 (190)
68 2hz8_A De novo designed DIIRON 63.3 1.1 3.7E-05 38.6 -0.8 68 125-194 19-86 (115)
69 1syy_A Ribonucleoside-diphosph 63.2 6.1 0.00021 38.0 4.2 210 126-347 63-314 (346)
70 3qhb_A Symerythrin, ORF180; fo 62.7 1.2 4.1E-05 40.3 -0.7 149 112-276 3-174 (179)
71 1g8i_A Frequenin, neuronal cal 62.5 5.2 0.00018 32.3 3.1 65 112-177 109-185 (190)
72 2ovk_B RLC, myosin regulatory 62.0 12 0.0004 29.2 4.9 94 98-198 11-116 (153)
73 2l2e_A Calcium-binding protein 61.4 15 0.00052 29.6 5.7 30 147-177 156-185 (190)
74 3qhb_A Symerythrin, ORF180; fo 61.0 2.9 0.0001 37.8 1.4 61 135-195 112-174 (179)
75 3bvf_A Ferritin; iron storage, 60.9 11 0.00037 32.8 5.0 122 137-262 18-140 (181)
76 1jba_A GCAP-2, protein (guanyl 60.7 14 0.00048 30.5 5.5 64 112-176 105-185 (204)
77 2l4h_A Calcium and integrin-bi 58.7 17 0.0006 31.1 5.9 64 112-176 139-211 (214)
78 2ehb_A Calcineurin B-like prot 56.8 23 0.00079 29.1 6.1 75 100-177 111-193 (207)
79 1wdc_B Scallop myosin; calcium 56.7 8.8 0.0003 30.0 3.4 54 112-166 97-150 (156)
80 1s6c_A KV4 potassium channel-i 56.0 12 0.00041 30.0 4.2 65 112-177 102-178 (183)
81 3pwf_A Rubrerythrin; non heme 55.3 4.2 0.00014 36.0 1.4 62 140-201 69-132 (170)
82 2zfd_A Calcineurin B-like prot 52.5 29 0.001 29.5 6.2 65 112-177 132-204 (226)
83 2l2e_A Calcium-binding protein 52.5 15 0.00052 29.6 4.3 63 101-165 64-126 (190)
84 2jul_A Calsenilin; EF-hand, ca 52.0 12 0.00043 32.6 3.9 82 81-164 110-191 (256)
85 1jfj_A Ehcabp, calcium-binding 51.4 11 0.00036 28.0 2.9 70 112-181 10-87 (134)
86 2jnf_A Troponin C; stretch act 50.5 22 0.00075 27.5 4.8 87 101-190 11-109 (158)
87 2jjz_A Ionized calcium-binding 49.4 15 0.00051 29.8 3.8 80 100-181 50-129 (150)
88 1y1x_A Leishmania major homolo 48.7 34 0.0012 28.1 5.9 65 94-166 57-121 (191)
89 3chh_A P-aminobenzoate N-oxyge 48.5 11 0.00039 36.7 3.4 185 125-321 71-285 (336)
90 1k94_A Grancalcin; penta-EF-ha 47.1 21 0.00072 28.3 4.2 74 112-191 80-153 (165)
91 2bl0_B Myosin regulatory light 46.9 35 0.0012 25.8 5.3 83 99-190 4-94 (145)
92 3fwb_A Cell division control p 46.5 19 0.00065 27.8 3.8 90 98-190 18-114 (161)
93 3j04_B Myosin regulatory light 46.1 20 0.00067 27.3 3.8 65 99-165 75-139 (143)
94 1dgu_A Calcium-saturated CIB; 45.9 21 0.0007 28.8 4.1 64 112-176 108-180 (183)
95 2ehb_A Calcineurin B-like prot 45.6 35 0.0012 28.0 5.5 81 100-181 34-123 (207)
96 2mys_C Myosin; muscle protein, 45.5 44 0.0015 25.2 5.7 72 94-166 38-113 (149)
97 2aao_A CDPK, calcium-dependent 45.4 27 0.00093 27.2 4.6 70 94-165 57-126 (166)
98 2v2p_A Ferritin light chain; m 45.1 28 0.00097 30.0 5.0 135 138-275 11-149 (174)
99 1bjf_A Neurocalcin delta; calc 44.8 31 0.0011 27.7 4.9 63 112-175 109-183 (193)
100 1rcd_A L ferritin; iron storag 44.5 30 0.001 29.8 5.1 136 137-275 11-150 (173)
101 1j30_A 144AA long hypothetical 44.1 8.7 0.0003 31.9 1.6 58 139-196 81-140 (144)
102 3qrx_A Centrin; calcium-bindin 43.3 18 0.00061 28.4 3.2 76 112-190 38-119 (169)
103 3ox6_A Calcium-binding protein 42.6 17 0.00059 27.5 3.0 88 100-190 8-106 (153)
104 3sjs_A URE3-BP sequence specif 41.8 33 0.0011 29.4 5.0 61 96-164 83-143 (220)
105 2ovk_B RLC, myosin regulatory 41.4 20 0.0007 27.8 3.3 16 94-109 46-61 (153)
106 3qrx_A Centrin; calcium-bindin 41.4 16 0.00056 28.6 2.7 87 93-181 57-149 (169)
107 3i5g_B Myosin regulatory light 40.2 46 0.0016 27.1 5.4 88 99-190 12-103 (153)
108 3qz3_A Ferritin; structural ge 40.2 34 0.0012 30.0 4.8 140 126-273 6-146 (184)
109 2cih_A Ferritin heavy chain; a 40.1 37 0.0013 29.7 5.0 136 137-275 15-154 (183)
110 3bjd_A Putative 3-oxoacyl-(acy 39.7 14 0.00047 35.4 2.4 97 180-279 188-297 (332)
111 2f33_A Calbindin; EF-hand, Ca2 39.0 56 0.0019 27.4 5.8 87 100-191 16-122 (263)
112 2be4_A Hypothetical protein LO 38.6 46 0.0016 28.0 5.3 88 98-190 9-122 (272)
113 4ds7_A Calmodulin, CAM; protei 37.0 21 0.00072 27.0 2.6 85 93-179 40-130 (147)
114 2a9u_A Ubiquitin carboxyl-term 36.9 6.2 0.00021 34.6 -0.4 22 229-250 63-84 (144)
115 3sjs_A URE3-BP sequence specif 36.5 23 0.00079 30.4 3.1 129 100-242 48-182 (220)
116 1gjy_A Sorcin, CP-22, V19; cal 36.4 31 0.001 27.5 3.6 75 112-192 82-156 (167)
117 1jk0_B RNR Y4, ribonucleoside- 36.2 32 0.0011 33.2 4.4 213 126-352 69-306 (345)
118 2jul_A Calsenilin; EF-hand, ca 36.2 25 0.00086 30.7 3.4 94 81-181 78-177 (256)
119 1s6c_A KV4 potassium channel-i 36.2 36 0.0012 27.2 4.0 65 98-164 54-118 (183)
120 3dd4_A KV channel-interacting 36.0 20 0.00069 30.8 2.7 24 152-176 200-223 (229)
121 1wy9_A Allograft inflammatory 35.8 34 0.0012 27.6 3.9 81 100-182 48-128 (147)
122 1k9u_A Polcalcin PHL P 7; poll 35.8 13 0.00046 26.0 1.3 62 101-165 4-65 (78)
123 4g5o_E G-protein-signaling mod 35.4 9.1 0.00031 25.3 0.3 16 267-282 2-17 (26)
124 1djx_A PLC-D1, phosphoinositid 35.4 17 0.0006 37.6 2.5 103 93-203 40-158 (624)
125 1juo_A Sorcin; calcium-binding 35.2 22 0.00076 29.3 2.7 90 97-192 90-187 (198)
126 2r2i_A Guanylyl cyclase-activa 35.0 54 0.0019 26.7 5.0 64 100-165 52-115 (198)
127 2lw1_A ABC transporter ATP-bin 34.8 13 0.00045 29.4 1.2 25 64-88 37-61 (89)
128 1alv_A Calpain, S-camld; calci 34.6 36 0.0012 27.2 3.8 76 112-192 87-162 (173)
129 2znd_A Programmed cell death p 34.1 36 0.0012 27.1 3.7 75 112-190 84-158 (172)
130 1tjo_A Iron-rich DPSA-homolog 34.1 1.2E+02 0.0042 26.1 7.3 149 129-280 20-176 (182)
131 1s1e_A KV channel interacting 34.0 48 0.0017 28.4 4.8 95 79-180 36-136 (224)
132 2clb_A DPS-like protein; DI-ir 33.7 42 0.0014 29.3 4.3 140 136-279 23-172 (188)
133 1fpw_A Yeast frequenin, calciu 33.7 29 0.00099 27.8 3.1 85 96-181 21-111 (190)
134 3khe_A Calmodulin-like domain 33.3 41 0.0014 26.9 3.9 76 112-190 50-141 (191)
135 2ggz_A Guanylyl cyclase-activa 33.1 49 0.0017 27.6 4.6 64 100-165 57-120 (211)
136 2bl0_B Myosin regulatory light 33.1 55 0.0019 24.6 4.5 83 94-181 35-124 (145)
137 2xze_A STAM-binding protein; h 32.9 15 0.00053 31.7 1.4 23 229-251 61-84 (146)
138 1s6i_A CDPK, calcium-dependent 32.5 28 0.00095 28.9 2.9 81 94-181 40-128 (188)
139 1dtl_A Cardiac troponin C; hel 32.5 67 0.0023 24.7 4.9 71 94-166 49-123 (161)
140 1s1e_A KV channel interacting 32.5 55 0.0019 28.1 4.8 63 100-164 89-151 (224)
141 2obh_A Centrin-2; DNA repair c 32.3 52 0.0018 25.6 4.3 65 94-165 36-106 (143)
142 2qqy_A Sigma B operon; dodecam 32.2 23 0.00079 28.1 2.3 61 139-199 86-147 (149)
143 2f2o_A Calmodulin fused with c 31.8 84 0.0029 24.8 5.5 70 94-165 41-111 (179)
144 2yuk_A Myeloid/lymphoid or mix 31.7 17 0.00057 29.5 1.4 32 151-182 27-66 (90)
145 3ox6_A Calcium-binding protein 31.5 38 0.0013 25.6 3.3 81 94-181 41-137 (153)
146 1k94_A Grancalcin; penta-EF-ha 31.5 57 0.0019 25.7 4.4 62 96-165 36-97 (165)
147 3h4s_E KCBP interacting Ca2+-b 31.3 34 0.0011 27.1 3.1 72 99-172 39-111 (135)
148 1mxr_A Ribonucleotide reductas 31.2 75 0.0026 30.8 6.1 70 126-197 60-130 (375)
149 1n1q_A DPS protein; four-helix 31.0 1.2E+02 0.0042 24.6 6.5 138 132-274 2-148 (149)
150 4ds7_A Calmodulin, CAM; protei 30.7 39 0.0013 25.5 3.2 81 101-181 9-96 (147)
151 1bjf_A Neurocalcin delta; calc 30.2 85 0.0029 25.1 5.4 63 100-164 63-125 (193)
152 1lko_A Rubrerythrin all-iron(I 30.1 57 0.0019 28.9 4.6 132 138-276 8-141 (191)
153 3dtp_E RLC, myosin regulatory 29.8 54 0.0018 27.2 4.2 76 94-181 87-173 (196)
154 1gjy_A Sorcin, CP-22, V19; cal 29.5 83 0.0028 24.9 5.1 63 96-166 38-100 (167)
155 2opo_A Polcalcin CHE A 3; calc 29.4 84 0.0029 22.2 4.7 65 100-167 11-75 (86)
156 2blf_B SORB, sulfite\:cytochro 29.3 80 0.0027 23.9 4.8 35 97-145 45-79 (81)
157 1g8i_A Frequenin, neuronal cal 29.3 37 0.0013 27.2 3.0 85 96-181 21-111 (190)
158 2be4_A Hypothetical protein LO 29.1 1.7E+02 0.0058 24.6 7.2 68 96-165 100-175 (272)
159 2mys_B Myosin; muscle protein, 29.1 73 0.0025 24.9 4.7 33 148-180 105-142 (166)
160 3khe_A Calmodulin-like domain 29.1 23 0.00078 28.3 1.7 81 99-181 86-169 (191)
161 1top_A Troponin C; contractIle 28.7 52 0.0018 25.3 3.7 82 100-181 17-108 (162)
162 1wdc_C Scallop myosin; calcium 27.7 43 0.0015 25.9 3.1 13 152-164 136-148 (156)
163 3dd4_A KV channel-interacting 27.5 56 0.0019 28.0 4.0 62 99-161 63-125 (229)
164 4gym_A Glyoxalase/bleomycin re 27.3 8.7 0.0003 30.3 -1.0 22 298-319 12-34 (149)
165 3dtp_E RLC, myosin regulatory 27.2 82 0.0028 26.0 4.9 82 101-191 58-145 (196)
166 3uno_A Probable bacterioferrit 27.2 69 0.0024 28.3 4.7 135 137-275 9-144 (189)
167 2zfd_A Calcineurin B-like prot 27.1 77 0.0026 26.9 4.8 87 100-190 45-140 (226)
168 1ji5_A DLP-1; dodecamer, four- 26.9 1E+02 0.0035 24.6 5.3 130 140-274 3-141 (142)
169 2mys_B Myosin; muscle protein, 26.7 72 0.0025 24.9 4.3 37 152-191 72-114 (166)
170 1top_A Troponin C; contractIle 26.4 95 0.0033 23.8 4.8 84 94-179 50-142 (162)
171 2jjz_A Ionized calcium-binding 25.8 60 0.002 26.2 3.7 46 94-141 80-125 (150)
172 2f2o_A Calmodulin fused with c 25.5 49 0.0017 26.2 3.1 56 112-167 94-149 (179)
173 1z6o_M Ferritin heavy chain; m 25.1 1.5E+02 0.0051 26.0 6.4 128 127-258 13-147 (191)
174 3chh_A P-aminobenzoate N-oxyge 25.0 42 0.0014 32.7 3.1 58 137-195 183-240 (336)
175 1dtl_A Cardiac troponin C; hel 25.0 72 0.0025 24.5 3.9 77 112-191 28-114 (161)
176 2aao_A CDPK, calcium-dependent 24.9 94 0.0032 24.1 4.6 87 101-190 25-117 (166)
177 3fwb_A Cell division control p 24.8 44 0.0015 25.7 2.6 82 93-181 52-144 (161)
178 2hpk_A Photoprotein berovin; s 24.6 1.4E+02 0.0047 24.5 5.8 68 96-165 70-155 (208)
179 1w7j_B Myosin light chain 1; m 24.4 39 0.0013 25.9 2.2 76 112-190 20-105 (151)
180 3u0k_A Rcamp; fluorescent prot 24.3 1E+02 0.0034 31.6 5.8 66 93-165 331-402 (440)
181 2d8n_A Recoverin; structural g 24.1 34 0.0012 28.1 2.0 15 150-164 119-133 (207)
182 1c7v_A CAVP, calcium vector pr 23.5 57 0.0019 22.8 2.8 67 98-167 7-74 (81)
183 2mys_C Myosin; muscle protein, 23.1 1.2E+02 0.004 22.8 4.7 69 112-181 18-97 (149)
184 1y1x_A Leishmania major homolo 23.1 1.2E+02 0.0041 24.8 5.1 94 97-194 80-181 (191)
185 2lmt_A Calmodulin-related prot 23.1 62 0.0021 25.4 3.2 86 96-181 3-95 (148)
186 3dka_A DINB-like protein; DINB 22.9 59 0.002 25.7 3.1 33 168-200 115-147 (155)
187 2sas_A Sarcoplasmic calcium-bi 22.8 1.2E+02 0.004 23.8 4.8 42 139-180 106-150 (185)
188 3fs7_A Parvalbumin, thymic; ca 22.6 1.3E+02 0.0043 22.1 4.7 79 94-181 4-93 (109)
189 3r0s_A Acyl-[acyl-carrier-prot 22.1 75 0.0026 28.6 4.0 47 98-146 207-253 (266)
190 2bl0_C Myosin regulatory light 21.7 55 0.0019 24.7 2.6 39 143-181 47-91 (142)
191 2ktg_A Calmodulin, putative; e 21.3 86 0.0029 22.0 3.4 64 100-163 11-75 (85)
192 2pvb_A Protein (parvalbumin); 21.3 1.4E+02 0.0049 21.8 4.8 75 97-180 6-91 (108)
193 3pm8_A PFCDPK2, calcium-depend 21.2 67 0.0023 26.8 3.2 89 99-190 53-147 (197)
194 3mse_B Calcium-dependent prote 21.2 87 0.003 25.4 3.8 75 100-181 73-154 (180)
195 2ovk_C Myosin catalytic light 21.1 89 0.003 24.2 3.8 53 112-164 95-149 (159)
196 3nyv_A Calmodulin-domain prote 21.0 82 0.0028 29.8 4.1 79 99-179 381-462 (484)
197 3pm8_A PFCDPK2, calcium-depend 20.8 24 0.00083 29.5 0.4 66 100-167 93-158 (197)
198 1vlg_A Ferritin; TM1128, struc 20.7 88 0.003 26.6 3.9 135 136-274 17-152 (176)
199 2itb_A TRNA-(MS(2)IO(6)A)-hydr 20.7 1.3E+02 0.0043 28.2 5.2 97 97-196 66-167 (206)
200 3h4s_E KCBP interacting Ca2+-b 20.5 79 0.0027 24.9 3.4 34 96-131 73-106 (135)
201 2kz2_A Calmodulin, CAM; TR2C, 20.3 95 0.0032 23.1 3.6 65 98-164 27-91 (94)
202 2gs4_A Protein YCIF; stress pr 20.3 73 0.0025 28.0 3.4 65 134-200 5-70 (166)
203 2d8n_A Recoverin; structural g 20.0 1.3E+02 0.0045 24.5 4.8 84 97-181 30-119 (207)
204 2i7a_A Calpain 13; calcium-dep 20.0 1.6E+02 0.0055 24.6 5.3 67 112-181 86-156 (174)
205 2f33_A Calbindin; EF-hand, Ca2 20.0 2.1E+02 0.0073 23.8 6.1 86 100-190 103-209 (263)
206 4g5s_E PINS homolog, G-protein 20.0 36 0.0012 22.7 1.0 17 267-283 2-18 (26)
No 1
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=96.56 E-value=0.0039 Score=50.40 Aligned_cols=141 Identities=16% Similarity=0.125 Sum_probs=98.0
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 014877 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (416)
Q Consensus 135 ~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTf 213 (416)
.++..++-|..-...|+.+...|.-+...+++.+ |.+++.|.-.+.+|..||.-|-+-+.+.|-..+++ +.+-. ..
T Consensus 7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~-~~~~~--~~ 83 (149)
T 2qqy_A 7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTI-PLRVK--QA 83 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-CCCCC--CC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-CCCCC--CC
Confidence 4567899999999999999999999999996544 66999999999999999999999888888655542 21111 12
Q ss_pred ccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhhCccch
Q 014877 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFL 281 (416)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmraqP~ll 281 (416)
..++=++=...=.|+-.-..|=.+...-++..+.... ++|+..-++|-+|-..|..++..-|..+
T Consensus 84 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~---~~l~~~~~eee~h~~~l~~~l~~~~~~~ 148 (149)
T 2qqy_A 84 EDVREMLEYARQSEYETIKRYEKRKEQAANLNMTELV---VKLEDMIADETNHMEELDRLLNDKAMVL 148 (149)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 2344455555555665444444444444445555544 5555568899999999999988755544
No 2
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=96.43 E-value=0.0054 Score=52.42 Aligned_cols=127 Identities=16% Similarity=0.134 Sum_probs=86.7
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccc-ccccccccccc-cCccccccc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF-NYALDLGFLTK-ARKYTFFKP 216 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df-~l~lDLgfLtk-~rkYTfF~P 216 (416)
..+.|......|-.+.-.|..++++. +||.++++|..||.+|.+|+..+.+-+..+ | +... +.. .+-+..+.|
T Consensus 21 ~~e~L~~A~~~E~~a~~~Y~~~A~~~--~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g-~~~~--~~~~~~~~~~~~~ 95 (175)
T 2fzf_A 21 LEELLGMAIKAEIGAREFYKSLAEKI--KIEALKEKINWLAEEEKKHEALLRKLYSQMFP-GKEV--VFPKEHIGPELQP 95 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHST-TCCC--CCCSCCBSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCC--cchhhhhhhhhhh
Confidence 57889999999999999999999998 679999999999999999999999998865 2 1111 111 111111111
Q ss_pred h-----------hhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 217 K-----------FIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 217 k-----------fIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
. .++=.-.-.| ..-|..|+.+-+.-.. --+=+-|+.=..||-+|.+.|..++..
T Consensus 96 ~~~~~~~~~~~~~~L~~ai~~E----~~a~~~Y~~~a~~~~d--~~~r~l~~~ia~eE~~H~~~l~~~l~~ 160 (175)
T 2fzf_A 96 VARELEKVQDIIDLIRWAMKAE----EIAAEFYLKLEEMVKE--EEKKRLMRYLADMERGHYYTLRAEYEL 160 (175)
T ss_dssp CCSCCCSHHHHHHHHHHHHHHH----HHHHHHHHHHHHTSCS--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccccCCHHHHHHHHHHHH----HHHHHHHHHHHhhCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111112 2356678887766221 345566888889999999999887754
No 3
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=96.23 E-value=0.0061 Score=51.96 Aligned_cols=132 Identities=15% Similarity=0.146 Sum_probs=86.3
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cCccHHHHhhccccchhhhhhhhhhhhcccccc--ccccccccc-------
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA--LDLGFLTKA------- 208 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~-~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~--lDLgfLtk~------- 208 (416)
..|.|...+..|-.|.-.|..+++.+++ +||.++++|..||.||.+|+.+|-+-.....+. -...++...
T Consensus 6 ~~e~L~~Ai~~E~~~~~~Y~~lA~~~~~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (167)
T 2oh3_A 6 LAEFLAHAIALETEAAERYVELADMMEAHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVGDE 85 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccCCCcHhhhhH
Confidence 6788999999999999999999994443 599999999999999999999998876553221 011110000
Q ss_pred -CccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 209 -RKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 209 -rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
..-..+.+..++=.-.-.|+-++--|-.+ .++-++-...- -|+.=.+||-.|-+.+..++..
T Consensus 86 ~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~---a~~~~d~~~k~---~~~~la~eE~~H~~~l~~~~~~ 148 (167)
T 2oh3_A 86 NDIHYLMTPYHALRYARDNEIRGMEYYKEA---AANSADPEVKR---LGADFAAEEAEHVVALDKWIEK 148 (167)
T ss_dssp ---CGGGSHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCHHHHHHHHHHHHHHHHHHHHHH---HHHCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 00011223344444445566665544433 23345544443 4666678899999999888763
No 4
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=96.15 E-value=0.006 Score=51.76 Aligned_cols=126 Identities=19% Similarity=0.179 Sum_probs=80.5
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccccccc-cccccccCcccccc--
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD-LGFLTKARKYTFFK-- 215 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD-LgfLtk~rkYTfF~-- 215 (416)
+.+.|...+..|-.|.-.|+.++. . +||.++++|.-||.+|.+|+.+|.+... .+..-+ .++|...-.-.+|+
T Consensus 15 ~~e~L~~Ai~~E~~~~~~Y~~lA~-~--~~~~~k~lF~~LA~eE~~H~~~l~~l~~-~~~~~~~~~~l~~~~~~~~f~~~ 90 (157)
T 1vjx_A 15 VSDILTVAIRLEEEGERFYRELSE-H--FNGEIKKTFLELADQERIHAEIFRKMSD-QENWDEVDSYLAGYAFYEVFPDT 90 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-S--CCSHHHHHHHHHHHHHHHHHHHHHHHHH-HSCHHHHTCBCCSBCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHHHHHHHhhc-cCcchhHHHHHHhhhhhhccchh
Confidence 577888899999999999999999 6 8999999999999999999999998854 221011 12321111112222
Q ss_pred -ch---------hhhhhhhcccccchhhHHHHHHHhhhC-CCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 216 -PK---------FIFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 216 -Pk---------fIfYAtYLSEKIGYwRYItIyRHLe~~-Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
+. .++=.-.-.|| .=|..|+.+-.. |+-... +-|+.=-++|..|...+..++.
T Consensus 91 ~~~~~~~~~~~~~~l~~ai~~E~----~a~~~Y~~~a~~~~d~~~k---~l~~~la~eE~~H~~~l~~~~~ 154 (157)
T 1vjx_A 91 SEILRRKDLTLKEVLDIAISVEK----DSIILYYELKDGLVNSDAQ---KTVKKIIDQEKEHLRKLLEMKR 154 (157)
T ss_dssp TTGGGCSCCCHHHHHHHHHHHHH----HHHHHHHHHHHHCCSHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccCHHHHHHHHHHHHH----HHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11111111222 234456666553 443333 4466667889999998887765
No 5
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=95.36 E-value=0.03 Score=47.58 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 014877 135 LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (416)
Q Consensus 135 ~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTf 213 (416)
.+...++.|..-+..|+.+...|.-++..+++. .|.+++.|.-+|.+|..||--|-+-+.+.|-...++.+.+-.. .
T Consensus 8 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~- 85 (179)
T 1nfv_A 8 RKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVT-G- 85 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCC-S-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCC-C-
Confidence 355689999999999999999999999999764 3899999999999999999999999998887776655432211 1
Q ss_pred ccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
-.+.=++=+..=.|+-.-..|=.+...-+...+. .+-++|+...+||-.|-+.|..++..
T Consensus 86 ~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~---~t~~~l~~~~~eEe~h~~~l~~~l~~ 145 (179)
T 1nfv_A 86 QAVPVIYESDADQEDATIEAYSQFLKVCKEQGDI---VTARLFERIIEEEQAHLTYYENIGSH 145 (179)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344455555556665444444444444445554 45566666778899999999887764
No 6
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=95.02 E-value=0.011 Score=57.60 Aligned_cols=135 Identities=22% Similarity=0.242 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHhhhhcc----ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccccc-ccccccc--
Q 014877 134 PLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA-LDLGFLT-- 206 (416)
Q Consensus 134 e~R~~FidFLerScTaE----FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~-lDLgfLt-- 206 (416)
++++.|..-|+-+..-| +|||...--+++|. +=|-++++..+.+|||+.|..|.-..++.+.-+ -|-...+
T Consensus 188 ~~~~~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~~~e~p~~~~~~ 265 (375)
T 1mxr_A 188 ELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERE--LMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIA 265 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChhhHHhh
Confidence 45666766666665555 68887766899986 889999999999999999998876555443322 1111111
Q ss_pred ---ccCccccccchh---hhhhhhcccc-----------cchhhHHH--HHHHhhhCCCC--cccchhhhhHhhhhhccc
Q 014877 207 ---KARKYTFFKPKF---IFYATYLSEK-----------IGYWRYIT--IYRHLKANPEF--QCYPIFKYFENWCQDENR 265 (416)
Q Consensus 207 ---k~rkYTfF~Pkf---IfYAtYLSEK-----------IGYwRYIt--IyRHLe~~Pe~--r~~PIFk~FE~WCqDEnR 265 (416)
+.+-|..|+--. +=|+.|+-+. ..|-||++ ...-|-=-|-+ .-.|+ .|+++|.+-..-
T Consensus 266 ~~~~~~i~~l~~eave~E~~~~~~~~~~~~~~Gl~~~~~~~Yi~y~an~rL~~LG~~~~y~~~~nP~-~w~~~~~~~~~~ 344 (375)
T 1mxr_A 266 EECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPI-PWINTWLVSDNV 344 (375)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCSC-GGGGGTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCH-HHHHHHHhhccc
Confidence 112222221000 1134444322 34788888 33355444433 36774 999999865444
Q ss_pred chhHHH
Q 014877 266 HGDFFS 271 (416)
Q Consensus 266 HGDfFa 271 (416)
+-|||.
T Consensus 345 ~~nFFE 350 (375)
T 1mxr_A 345 QVAPQE 350 (375)
T ss_dssp ------
T ss_pred ccCCCc
Confidence 678885
No 7
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=95.02 E-value=0.029 Score=45.97 Aligned_cols=135 Identities=14% Similarity=0.044 Sum_probs=101.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++.|-.-+..|+.+...|.-++..+++. -|.+++.|.-.|.+|..||--|-+-+...|-...+..+.+-.. . ..
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~-~~ 82 (158)
T 2y3q_A 5 TKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI-G-ED 82 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C-CC
Confidence 4578899999999999999999999999644 4789999999999999999999998888887666655443221 1 34
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+.=++=+..=.|+-.-..|=.+...-+...+. .+-++|+...+||-.|-+.+..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~---~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (158)
T 2y3q_A 83 VEEMLRSDLALELDGAKNLREAIGYADSVHDY---VSRDMMIEILRDEEGHIDWLETELDL 140 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666666666555555555555555554 45566666788999999999987754
No 8
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.71 E-value=0.038 Score=53.85 Aligned_cols=126 Identities=23% Similarity=0.275 Sum_probs=65.5
Q ss_pred cCChHHHHHHHHHHHhhhhcc----ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhh----hhhhcccccccc
Q 014877 130 KMQGPLRQIFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL----NKGLSDFNYALD 201 (416)
Q Consensus 130 ~l~~e~R~~FidFLerScTaE----FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFl----Nkal~Df~l~lD 201 (416)
+.+.+.++.|..=|+-++.-| +|||...--++||. +=|-++++..+.+|||+.|..|. +..+....-..
T Consensus 165 ~~~~~~~~~~~~~lva~~~lEGi~FysgF~~~~~l~~~g--~m~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~~e~- 241 (350)
T 4dr0_A 165 AIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQG--KLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEK- 241 (350)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTT--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHH-
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-
Confidence 333333455666666665555 57887777888876 78999999999999999999873 22222211100
Q ss_pred cccccccCccccccchhhh------------hhhhcccccc-------hhhHHHHHH--HhhhCCC---CcccchhhhhH
Q 014877 202 LGFLTKARKYTFFKPKFIF------------YATYLSEKIG-------YWRYITIYR--HLKANPE---FQCYPIFKYFE 257 (416)
Q Consensus 202 LgfLtk~rkYTfF~PkfIf------------YAtYLSEKIG-------YwRYItIyR--HLe~~Pe---~r~~PIFk~FE 257 (416)
++ . + -++|+ |+.||-+.|| |=||++==| .|---|- ....|+ +.
T Consensus 242 ----~~--e---~-~~~i~~l~~eave~E~~~~~~~~~~iGl~~~~~~Yi~y~An~~L~~LG~~~~y~~~~~nP~---~~ 308 (350)
T 4dr0_A 242 ----KA--E---L-REFAIDLLNQLYENELEYTEDLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEEDINPI---VL 308 (350)
T ss_dssp ----HH--H---H-HHHHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHHHHHHHHHHHTTCCCCSCCCCCCHH---HH
T ss_pred ----HH--H---H-HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCch---HH
Confidence 00 0 0 01122 4555556676 666666332 2222222 224676 56
Q ss_pred hhhhhcccchhHHH
Q 014877 258 NWCQDENRHGDFFS 271 (416)
Q Consensus 258 ~WCqDEnRHGDfFa 271 (416)
+|..++..|-|||.
T Consensus 309 ~~~~~~~k~~nFFE 322 (350)
T 4dr0_A 309 NGLNTKTKSHDFFS 322 (350)
T ss_dssp HTC-----------
T ss_pred HhcccccCcCCCCc
Confidence 69999888899997
No 9
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=93.89 E-value=0.094 Score=44.17 Aligned_cols=135 Identities=16% Similarity=0.038 Sum_probs=100.8
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++.|...+..|+.+...|.-++..+++. -|.+++.|.-.|.+|..||.-|-+-+.+.|-..+++-+.+-.. ...
T Consensus 7 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~--~~~ 84 (174)
T 3qb9_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI--GQT 84 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--CSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC--CCC
Confidence 4578999999999999999999999999754 4899999999999999999999888988887777766544332 234
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+.=++=+..=.|+-.-..|-.+...-++.-+.. +-++|+.-.++|-.|-+.+...++.
T Consensus 85 ~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~---t~~~l~~~l~eEe~h~~~l~~~l~~ 142 (174)
T 3qb9_A 85 LREQFEADLAIEYDVLNRLKPGIVMCREKQDTT---SAVLLEKIVADEEEHIDYLETQLEL 142 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666666655445544444445554544 5555666677899999999887764
No 10
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=93.86 E-value=0.06 Score=44.18 Aligned_cols=135 Identities=18% Similarity=0.068 Sum_probs=98.5
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++.|..-...|+.+...|.-++..+++. -|.+++.|.-+|.+|..||.-|-+-+.+.|-..++..+.+-+. . -.
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~-~-~~ 82 (161)
T 1jgc_A 5 AKVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRI-G-EG 82 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-C-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC-C-CC
Confidence 4578999999999999999999999999764 5789999999999999999999999988887666654432221 1 23
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+.=++=+.+=.|+-.-..|-.+...-++. .-+.+-++|+....+|-.|-+.|..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~---~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 140 (161)
T 1jgc_A 83 PRETLECDLAGEHDALKLYREARDYCAEV---GDIVSKNIFESLITDEEGHVDFLETQISL 140 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555655444444444433333 34556677777789999999999887753
No 11
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=93.64 E-value=0.096 Score=42.45 Aligned_cols=135 Identities=17% Similarity=0.068 Sum_probs=94.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++-|..-...|+.+...|.-++..+++. -+.+++.|.-.|.+|..||.-|-+-+.+.|-..++.-+.+-..- ..
T Consensus 5 ~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~--~~ 82 (155)
T 2fkz_A 5 KIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIG--EH 82 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC--CC
Confidence 4578889999999999999999999999664 36778888888999999999999999988877666543332111 12
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+.=++=+.+=-|+-.-..|=.+...-+.. .-+.+-++|+...++|-.|-..|..++..
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~---~D~~t~~~l~~~~~eee~h~~~l~~~l~~ 140 (155)
T 2fkz_A 83 TKEMLECDLKLEQAGLPDLKAAIAYCESV---GDYASRELLEDILESEEDHIDWLETQLDL 140 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444333333333333333 34556677777788899999999988753
No 12
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=92.53 E-value=0.12 Score=42.67 Aligned_cols=131 Identities=15% Similarity=0.057 Sum_probs=96.4
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++.|-+-...|+.....|.-++..+++. -+.+++.|.-.|.+|..||--|=+-+...|-...++-+.+-..- -.
T Consensus 7 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~~--~~ 84 (161)
T 3uoi_A 7 PDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG--QT 84 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC--SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCCC--CC
Confidence 3478899999999999999999999999765 58899999999999999999999988888877766554432111 12
Q ss_pred chhhhhhhhcccccchhhHHHHHHHh----hhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHL----KANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHL----e~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+.=++=+.+=.|+- -|..||.+ ++.. -+.+-++|+....||-.|.++|..+++.
T Consensus 85 ~~e~l~~~l~~E~~----~~~~~~~~~~~A~~~~---D~~t~~~l~~~~~eee~h~~~l~~~l~~ 142 (161)
T 3uoi_A 85 LREQFEADLAIEYD----VLNRLKPGIVMCREKQ---DTTSAVLLEKIVADEEEHIDYLETQLEL 142 (161)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333443 45555555 4443 4556777888899999999999988764
No 13
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=91.20 E-value=0.13 Score=49.84 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=50.5
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh---hhhhhhc--
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF---IFYATYL-- 225 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~Pkf---IfYAtYL-- 225 (416)
+|||...--+++|. +=|-++++..+.+|||++|..|.-.-.+..--.. .+.+-+..++--. +=|+.++
T Consensus 191 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~-----~~~~v~~l~~eave~E~~~~~~~l~ 263 (345)
T 1jk0_B 191 AGNYASMFWLTDKK--IMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKP-----NPKIIEKIITEAVEIEKEYYSNSLP 263 (345)
T ss_dssp HHHHHHHHHHTSSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC-----CHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHcC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 47888777888876 7899999999999999999987665554322111 1222222221000 0033333
Q ss_pred --------ccccchhhHHHH--HHHhhhCCCC-cccchhhhhHhhhhhcccchhHHH
Q 014877 226 --------SEKIGYWRYITI--YRHLKANPEF-QCYPIFKYFENWCQDENRHGDFFS 271 (416)
Q Consensus 226 --------SEKIGYwRYItI--yRHLe~~Pe~-r~~PIFk~FE~WCqDEnRHGDfFa 271 (416)
.+-..|-||++= ..-|---|-+ ...| |.|++.|.-+. +-|||.
T Consensus 264 ~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~y~~~nP-~~wm~~~~~~~--k~nFFe 317 (345)
T 1jk0_B 264 VEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNP-FEFMEDVATAG--KTTFFE 317 (345)
T ss_dssp -----------CTHHHHHHHHHHHHTTCCCCC-------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHhcccc--cCcccc
Confidence 233457788873 3333322222 1455 48999996533 348986
No 14
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=91.12 E-value=0.094 Score=43.88 Aligned_cols=69 Identities=16% Similarity=0.189 Sum_probs=58.5
Q ss_pred hHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccc
Q 014877 124 FKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (416)
Q Consensus 124 F~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df 196 (416)
+....+.|++++|.. .-..+|..+|.-+.=+|..+.... +||.++.++.-++.+|..|+|-+-+.|...
T Consensus 6 ~he~~~~ls~~~~d~--~rai~aL~~EleAI~~Y~q~A~~t--~D~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 6 YFEPTQELSDETRDM--HRAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp CCSCGGGSCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334457888888874 335669999999999999999988 899999999999999999999998887765
No 15
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=90.24 E-value=1.5 Score=42.16 Aligned_cols=189 Identities=14% Similarity=0.067 Sum_probs=100.8
Q ss_pred HHhhcCChHHHHHHHHHHH-----hhhhccccchhhHHHHhhhhc-ccCccHHHHhhccccchhhhhhhhhhhhcccccc
Q 014877 126 EAADKMQGPLRQIFVEFLE-----RSCTAEFSGFLLYKELGRRLK-KTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA 199 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLe-----rScTaEFSGflLYKEl~Rrlk-~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~ 199 (416)
++|..|+++.|..+.-=|- .|..++.-+ .+...+. ..+|++.-++...+=+|++|+=.-..-+.-+|..
T Consensus 53 ~dw~~Lt~~Er~~~~~vL~~ft~~D~iv~~nl~-----~~~~~v~~e~~pE~~~~l~~q~~~EaiHs~sYs~il~tl~~~ 127 (323)
T 3ee4_A 53 ADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQ-----PFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGIS 127 (323)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTH-----HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3677888888877643221 112222211 2333332 1369999999999999999999888777776543
Q ss_pred cccccccccCccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCC-----------------cc----cchhhhhH-
Q 014877 200 LDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEF-----------------QC----YPIFKYFE- 257 (416)
Q Consensus 200 lDLgfLtk~rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~-----------------r~----~PIFk~FE- 257 (416)
=+ ....-++... |-.| -+|+.+..|+.+..+|.. .| +-+|-||.
T Consensus 128 ~~--~f~~~~~~p~-----------lr~k-~~~~l~~~~~~~~~~~~~~~~~~~lvaf~~~lEGi~FysgF~~~~~~l~~ 193 (323)
T 3ee4_A 128 ED--LHRYLDDLPA-----------YRQI-FYAELPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYAWHKICVE 193 (323)
T ss_dssp SC--CGGGGTTCHH-----------HHHH-HHTHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHTT
T ss_pred HH--HHHHHHcCHH-----------HHHH-HHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 1111111111 1222 145555556555555541 11 12332322
Q ss_pred ------------hhhhhcccchhHHHHHHh----hCccchhhhhhHHHHHH-HHHHHHHhhhhhhccchhHH-hh--cCC
Q 014877 258 ------------NWCQDENRHGDFFSALMK----AQPQFLNDWKAKLWARF-FCLSVYVTMYLNDCQRTAFY-EG--IGL 317 (416)
Q Consensus 258 ------------~WCqDEnRHGDfFaalmr----aqP~ll~g~~~kLW~RF-FLLsVfaTMyl~D~~R~~Fy-~a--lGl 317 (416)
-=+.||.+||+|...+.+ .+|++.+. .+=|++= +.-+|=..=|..+. | .. |||
T Consensus 194 rg~m~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~e~p~~~~~--~~~~v~el~~eave~~e~~~~~-----~~~~~~lGl 266 (323)
T 3ee4_A 194 RAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWTV--FETRMNELIPLALRLIEEGFAL-----YGDQPPFDL 266 (323)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHH--HHHHHHHHHHHHHHHHHHHHHT-----TTTCCSTTC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhhHH--HHHHHHHHHHHHHHHHHHHHHH-----cCCCccCCC
Confidence 236799999999877655 45665332 2222222 22222211222221 2 22 499
Q ss_pred ChhhhhHHHHHHhhhhh-----hccccc
Q 014877 318 DTKEFDMHVIIETNRTT-----ARIFPA 340 (416)
Q Consensus 318 d~~~yD~~Vi~~TN~ta-----~rvFP~ 340 (416)
+..+....|--.+|..- .+.||+
T Consensus 267 ~~~~~~~Yi~y~AnrrL~~LG~~~~f~~ 294 (323)
T 3ee4_A 267 SKDDFLQYSTDKGMRRFGTISNARGRPV 294 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTCCG
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCCCH
Confidence 99988888887777655 455765
No 16
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=90.02 E-value=0.67 Score=38.34 Aligned_cols=136 Identities=14% Similarity=0.173 Sum_probs=95.0
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc---ccccCcc
Q 014877 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF---LTKARKY 211 (416)
Q Consensus 136 R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf---Ltk~rkY 211 (416)
++..++-|-.-+..|+.....|.-++..+++.+ +.+++.|.-.|.+|..||--|-+-+.+.|-..++.. +.+.+ -
T Consensus 15 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~~~-~ 93 (170)
T 2vzb_A 15 VKSLIDQLNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELAR-C 93 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHHCS-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHhhc-C
Confidence 456789999999999999999999999996532 556677777799999999999999998887777665 54432 1
Q ss_pred cc-----ccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 212 TF-----FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 212 Tf-----F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.+ +.+.=++=+..=.|+- -+..||.+-+.-+..-+.+-++|+...++|-.|-..|..++..
T Consensus 94 ~~~~~~~~~~~e~l~~~l~~E~~----~~~~~~~~~~~a~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~ 159 (170)
T 2vzb_A 94 KYDSPTAFDSVSLLNQNVSSERC----AILRYQEIANFTNGKDYTTCDIAKHILAEEEEHEQDLQDYLTD 159 (170)
T ss_dssp CCCCCCSCBHHHHHHHHHHHHHH----HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1233333333333443 3444555443322225667788888889999999999988753
No 17
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=89.96 E-value=0.2 Score=48.27 Aligned_cols=53 Identities=28% Similarity=0.332 Sum_probs=40.5
Q ss_pred HHHHHHHHHhh-hhcc----ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhh
Q 014877 136 RQIFVEFLERS-CTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 136 R~~FidFLerS-cTaE----FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlN 190 (416)
++.|..=|+-+ +.-| +|||...--+++|. +-|-++++..+.+|||++|..|.-
T Consensus 178 ~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~ 235 (346)
T 1syy_A 178 LQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQN--KMIGIGEQYQYILRDETIHLNFGI 235 (346)
T ss_dssp HHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHHH
Confidence 44555555554 4444 48888777888886 789999999999999999998754
No 18
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=89.87 E-value=0.15 Score=49.11 Aligned_cols=55 Identities=22% Similarity=0.385 Sum_probs=41.9
Q ss_pred HHHHHHHhhhhcc----ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhc
Q 014877 138 IFVEFLERSCTAE----FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 138 ~FidFLerScTaE----FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
.|..=|+-++.-| +|||...--+++|. +-|-++++..+.+|||++|..|.-..++
T Consensus 174 ~~~~~lva~~~lEgi~FysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~ 232 (346)
T 2rcc_A 174 TFLESIVYDVILEGLNFYSGFAFFYNLARNQ--KMVSTSTMINYINRDEQLHVYLFTNIFK 232 (346)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4444444455555 58988877888886 7899999999999999999988654433
No 19
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=89.61 E-value=0.064 Score=52.75 Aligned_cols=52 Identities=27% Similarity=0.468 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhh-hhh
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAG-FLN 190 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAG-FlN 190 (416)
.+.++-|.-++.+|..|.=.|.++.... +||.++++|..++.||-+|+| |++
T Consensus 18 ~el~~air~ai~~E~eAi~~Y~q~A~~~--~d~~~K~vl~~ia~EEk~H~~~f~~ 70 (345)
T 2e0z_A 18 EELMEILRLAIIAELDAINLYEQMARYS--EDENVRKILLDVAREEKAHVGEFMA 70 (345)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567788889999999999999999988 899999999999999999999 544
No 20
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=89.42 E-value=0.21 Score=48.57 Aligned_cols=189 Identities=16% Similarity=0.184 Sum_probs=118.3
Q ss_pred hhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhc--cccchhhhhhhhhhhhcccccccc-cc-
Q 014877 128 ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL--MSRDEARHAGFLNKGLSDFNYALD-LG- 203 (416)
Q Consensus 128 ~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~l--MaRDEARHAGFlNkal~Df~l~lD-Lg- 203 (416)
-|.||++-|+..+++|.+-.-+|+.|+.-..|...+- |.|.+-..+ |+-||.+|+-.|...+.++|++-| |-
T Consensus 22 ~d~mP~~Yr~~L~~ll~~laD~ELi~~~rl~ew~~~A----P~Lee~iALa~ia~DE~GHa~~l~~~a~~lG~d~d~l~~ 97 (311)
T 3pvt_A 22 QDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRA----PTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQ 97 (311)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHTHHHHHTTGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3679999999999999999999999999999998877 999886654 678999999999999999987432 11
Q ss_pred cccccCcccc---c-cc--hhh--hhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 204 FLTKARKYTF---F-KP--KFI--FYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 204 fLtk~rkYTf---F-~P--kfI--fYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
++-.. ++.| | .| .|. +--.||-+-.+.-. |+-|. +..+-|+=+=...=|-+|-.|-++-...|+
T Consensus 98 ~~r~~-~~~~~~lfe~P~~dWad~vvr~~l~D~~a~~~----~~~L~---~ss~~plA~~a~ki~kEE~yH~~~g~~wv~ 169 (311)
T 3pvt_A 98 KMLDG-RMKYSSIFNYPTLSWADIGVIGWLVDGAAIVN----QVALC---RTSYGPYARAMVKICKEESFHQRQGFEACM 169 (311)
T ss_dssp HHHTT-SSCCCGGGGSCCCSHHHHHHHHHHHHHHHHHH----HHTTT---TCSBHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcc-hhhhhhHHhCCCCCHHHHHHHHHHHHHHHHHH----HHHHH---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221 2221 2 23 221 12234444443322 33333 344667777778889899888877554443
Q ss_pred h----Ccc---chhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCCh-------hhhhHHHHHHhh
Q 014877 276 A----QPQ---FLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDT-------KEFDMHVIIETN 331 (416)
Q Consensus 276 a----qP~---ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~-------~~yD~~Vi~~TN 331 (416)
. .|+ .+..-.+++|... +-.|..- =.|-.+.+-.-+-||-+ ..|...|...-.
T Consensus 170 rL~~gt~esr~r~Q~Al~~~wp~~--~elFg~~-~~~s~~~~~~~~~Gi~~~~n~eLR~~w~~~v~~~l~ 236 (311)
T 3pvt_A 170 ALAQGSEAQKQMLQDAINRFWWPA--LMMFGPN-DDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVE 236 (311)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHH--HHTTCSC-GGGCTTHHHHHHTTSCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHH--HHHcCCC-ccccchHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 333 3445567888765 3333321 01223455555666654 345555544444
No 21
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=89.35 E-value=0.56 Score=39.49 Aligned_cols=134 Identities=19% Similarity=0.152 Sum_probs=107.4
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+.-|+.|-+-.+.|++....|-=.++-.++. -+.+++.|.--|.+|-.||--|=+-+.+.|-...++-+.+.+ .+-.
T Consensus 5 ~kvi~~LN~~l~~El~A~~~Y~~~a~~~~~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~--~~~~ 82 (159)
T 4am5_A 5 QKVIEYLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR--IGQT 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC--CCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc--cchh
Confidence 3468999999999999999999888888654 688999999999999999999988899999888887775443 2345
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
|.=++=+.+=-|+-.=..|--+..+-++.-+....-+|+|| -.||-.|-+.|..++.
T Consensus 83 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~i---l~eEeeH~~~l~~~L~ 139 (159)
T 4am5_A 83 VKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEEL---MGDEEHHIDFLETQLD 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 66677777777887777777788888887776666655555 4689999999987765
No 22
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=89.33 E-value=0.99 Score=39.39 Aligned_cols=149 Identities=9% Similarity=0.006 Sum_probs=112.2
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc---
Q 014877 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--- 204 (416)
Q Consensus 129 d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--- 204 (416)
..|+++.++..++.|-.-...|+.....|+-+...++..+ +.+++.|.-.+-+|..||.-|-+-+.+.|-..+++.
T Consensus 19 ~~l~~~~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~ 98 (192)
T 2vxx_A 19 ILLEKATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQL 98 (192)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 4678889999999999999999999999999999997664 678999999999999999999999999999888851
Q ss_pred --ccccCcc--ccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhhCccc
Q 014877 205 --LTKARKY--TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (416)
Q Consensus 205 --Ltk~rkY--TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmraqP~l 280 (416)
+++-+.+ .+..++=++=+..=.|+..=..|=.+...-+..-+ +..-.+++...++|-.|-+++.+.+...|-.
T Consensus 99 ~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D---~~T~~lL~~~l~eeEkh~w~L~~~L~~~~l~ 175 (192)
T 2vxx_A 99 AALCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGD---RATAYLYDQILLKTEERAYHIGHFLANDSLK 175 (192)
T ss_dssp HHHCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred HHHCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 1122222 24566667766666665443444444443344434 4455666677788999999999999865543
No 23
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=89.11 E-value=1 Score=45.30 Aligned_cols=111 Identities=19% Similarity=0.181 Sum_probs=55.1
Q ss_pred cc-chhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccch---hhhhhhhc-
Q 014877 151 FS-GFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPK---FIFYATYL- 225 (416)
Q Consensus 151 FS-GflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~Pk---fIfYAtYL- 225 (416)
|| ||.-.--+++|. +-|-++++..+.+|||++|..|.-..++..-= -+++.+-|..++-- =+=|+.|+
T Consensus 263 fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~~l~~-----~~~~e~v~el~~eave~E~~~~~~~l 335 (419)
T 1jk0_A 263 FSGSFASIFWLKKRG--MMPGLTFSNELICRDEGLHTDFACLLFAHLKN-----KPDPAIVEKIVTEAVEIEQRYFLDAL 335 (419)
T ss_dssp THHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55 455344678876 78999999999999999999887666554211 11222222222100 00044554
Q ss_pred -ccc--------cchhhHHH--HHHHhhhCCCC-cccchhhhhHhhhhhcccchhHHH
Q 014877 226 -SEK--------IGYWRYIT--IYRHLKANPEF-QCYPIFKYFENWCQDENRHGDFFS 271 (416)
Q Consensus 226 -SEK--------IGYwRYIt--IyRHLe~~Pe~-r~~PIFk~FE~WCqDEnRHGDfFa 271 (416)
-+- ..|=+|++ ..+-|---|-+ ...| |.|++.|.-. -+-|||.
T Consensus 336 p~~liGln~~~~~~YI~Y~Anr~L~~LG~~~~y~~~NP-~~wm~~is~~--~ktnFFE 390 (419)
T 1jk0_A 336 PVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENP-FDFMENISLA--GKTNFFE 390 (419)
T ss_dssp CGGGGTCCHHHHHHHHHHHHHHHHHTTTCCCSSCCCCC-CGGGGC-------------
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC-hHHHHHhccc--cccccCc
Confidence 233 34667776 22233222222 1455 4899998653 3348886
No 24
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=88.69 E-value=0.75 Score=38.66 Aligned_cols=148 Identities=9% Similarity=0.017 Sum_probs=115.9
Q ss_pred cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc----
Q 014877 130 KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF---- 204 (416)
Q Consensus 130 ~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf---- 204 (416)
.++++.++..++-|-.-...|+...+.|+-+...++..+ +.+++.|.-.+-+|..||--|-.-+.+.|-..+++.
T Consensus 2 ~~~~~~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~ 81 (158)
T 2c41_A 2 SATTTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYL 81 (158)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheECcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 367788999999999999999999999999999996654 568999999999999999999999999999998885
Q ss_pred ----ccccCccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhhCccc
Q 014877 205 ----LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (416)
Q Consensus 205 ----Ltk~rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmraqP~l 280 (416)
+...+. +..++=++=...=.|+..=.+|=.+...-++.-++.-..+ ++....++-.|-.++.+.++.-|+.
T Consensus 82 ~~s~i~~~~~--~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~l---l~~~l~~~Ek~~w~l~~~l~~~~g~ 156 (158)
T 2c41_A 82 KVATVTPSSG--QLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADL---YTRLVQTHQKHRWFLKEFLAKGDGL 156 (158)
T ss_dssp HHCCSCCCCS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH---HHHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred HHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCC
Confidence 344444 4467777777766666665566566666666656555555 5556677899999999999877766
Q ss_pred hh
Q 014877 281 LN 282 (416)
Q Consensus 281 l~ 282 (416)
|+
T Consensus 157 ~~ 158 (158)
T 2c41_A 157 VS 158 (158)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 25
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=88.52 E-value=0.99 Score=37.33 Aligned_cols=133 Identities=20% Similarity=0.143 Sum_probs=97.3
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~P 216 (416)
..++.|-+-...|+.....|.-++..+++. .+.+++.|.-.+-+|..||--|-+-+.+.|-...++-+.+-+. .-.+
T Consensus 6 ~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~--~~~~ 83 (161)
T 3gvy_A 6 KVIEYLNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRI--GQTL 83 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC--CSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCC--CCCH
Confidence 468889999999999999999999998765 5899999999999999999999999999887766644432221 1122
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCC-CCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 217 KFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.=++=+.+=.|+ .-|..||.+-+.- +..-+.+-++|+....||-.|-++|...++.
T Consensus 84 ~e~l~~~l~~E~----~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~ 140 (161)
T 3gvy_A 84 RETLDADLAAEH----DARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDL 140 (161)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333343444 4566666644322 2445667788888899999999999887754
No 26
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=88.11 E-value=0.16 Score=48.68 Aligned_cols=43 Identities=21% Similarity=0.027 Sum_probs=35.6
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
+|||...--+++|. +-|-++++..+.+|||++|..|.-..++.
T Consensus 196 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~ 238 (311)
T 2o1z_A 196 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSL 238 (311)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48887777888886 78999999999999999999887655443
No 27
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=88.04 E-value=0.24 Score=41.89 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=48.6
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
..+-|.-....|-....+|+++.+++ .+|.++++|..++.||..|...|-+.+.+
T Consensus 101 ~~~~l~~ai~~E~~a~~~Y~~~a~~~--~d~~~k~l~~~la~eE~~H~~~l~~~~~~ 155 (157)
T 1vjx_A 101 LKEVLDIAISVEKDSIILYYELKDGL--VNSDAQKTVKKIIDQEKEHLRKLLEMKRE 155 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56677778889999999999999999 78999999999999999999988776543
No 28
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=88.02 E-value=4.1 Score=39.53 Aligned_cols=214 Identities=11% Similarity=0.112 Sum_probs=112.8
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccccc------
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY------ 198 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaE-FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l------ 198 (416)
++|.+|+++.|..+.-=|--=..++ --|-.+-..+.+-+ .+|++.-++...+=.|+.|+-.-..-+.-++.
T Consensus 75 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~ 152 (349)
T 2p1i_A 75 KDFEKLNVNEKHFIKHVLAFFAASDGIVLENLASKFLREV--EIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 152 (349)
T ss_dssp HHHHHSCTTTHHHHHHHHHHHTTC-----CCCHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4777888888776654332211111 12222333455556 67999999999999999998776666655543
Q ss_pred -----cccccccccc-----Ccc----ccccchhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhhc
Q 014877 199 -----ALDLGFLTKA-----RKY----TFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDE 263 (416)
Q Consensus 199 -----~lDLgfLtk~-----rkY----TfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDE 263 (416)
-.+...|.|+ +-| ++.+ +.|-+ ++-|-|=+ -=|-.|| .|.++. ..-=+=+=.+-=+.||
T Consensus 153 ~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~-~lva~--~~lEGi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE 226 (349)
T 2p1i_A 153 NLFHAIENIPAIKNKALWAAKWINDTNSFAE-RIVAN--ACVEGILFSGSFCAIF-WFKKQN--KLHGLTFSNELISRDE 226 (349)
T ss_dssp HTTHHHHSCHHHHHHHHHHHHTSSCSSCHHH-HHHHH--HHHTTTTTHHHHHHHH-HHHTTT--CSTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHcCchHHHH-HHHHH--HHHHHHHHHHHHHHHH-HHHhcC--CCccHHHHHHHHHHHH
Confidence 1222333221 111 1111 22222 33465532 2334444 454432 2222223334456799
Q ss_pred ccchhHHHHHHhhCcc-chhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChhhhhHHHHHHhhhhhhcc-cccc
Q 014877 264 NRHGDFFSALMKAQPQ-FLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARI-FPAV 341 (416)
Q Consensus 264 nRHGDfFaalmraqP~-ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~ta~rv-FP~v 341 (416)
.+||+|...+++.--+ .-..+...|...-.=+ -.-|+.+.- .+..+||+..+....|--.+|..-.++ +|-+
T Consensus 227 ~~H~~f~~~l~~~l~~~~~~~~v~~l~~eave~---E~~~~~~~l---~~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~ 300 (349)
T 2p1i_A 227 GLHTDFNCLIYSLLENKLPENVVQNIVKEAVEV---ERSFICESL---PCDLIGMNSRLMSQYIEFVADRLLECLGCSKV 300 (349)
T ss_dssp HHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHH---HHHHHTTTS---CSTTTTCCHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHH---HHHHHHHhc---ccCCCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999875221 1122322332222211 012233222 157899999988888887888876655 5555
Q ss_pred cccCChh-hHHHH
Q 014877 342 LDVENPE-FKRRL 353 (416)
Q Consensus 342 Ldvd~P~-F~~~L 353 (416)
.++.||- |.+.+
T Consensus 301 y~~~nP~~wm~~~ 313 (349)
T 2p1i_A 301 FHSKNPFNWMDLI 313 (349)
T ss_dssp SCCCCSCCC----
T ss_pred CCCCCChHHHHHh
Confidence 5668995 66544
No 29
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=87.29 E-value=0.17 Score=48.64 Aligned_cols=39 Identities=23% Similarity=0.293 Sum_probs=31.0
Q ss_pred ccch-hhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhh
Q 014877 151 FSGF-LLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (416)
Q Consensus 151 FSGf-lLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNk 191 (416)
+||| ..+.-+++|. +=|-++++..+.+|||++|..|.-.
T Consensus 181 ysgF~~~~~~l~~rg--~m~G~~~~i~lI~RDE~~H~~f~~~ 220 (323)
T 3ee4_A 181 LTGYYAWHKICVERA--ILPGMQELVRRIGDDERRHMAWGTF 220 (323)
T ss_dssp HHHHHHHHHHHTTTT--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4677 3444577775 7799999999999999999988643
No 30
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=87.14 E-value=0.35 Score=41.32 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=60.8
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccccccccc
Q 014877 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDL 202 (416)
Q Consensus 129 d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDL 202 (416)
+||.-+..+..|+=|-.-+..+..|..-|+....++ ++|.|+.+|.-|+-+..+|+.=|..-+...|-..+-
T Consensus 2 ~~~~~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~--~d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~ 73 (153)
T 4etr_A 2 SHMNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDL--RDPQLKAAMLEQSRDCAAAADELERIVLELGGKPKD 73 (153)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--
T ss_pred cchhHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 467777788899999999999999999999999999 899999999999999999999999999999976553
No 31
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=87.00 E-value=0.94 Score=39.12 Aligned_cols=136 Identities=18% Similarity=0.061 Sum_probs=97.9
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 014877 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (416)
Q Consensus 136 R~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF 214 (416)
.+..++.|-+-...|+.....|.-++..+++. .+.+++.|.-.|-+|..||--|-+-+.+.|-...++-+.+-+ .. -
T Consensus 25 ~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~-~~-~ 102 (182)
T 3fvb_A 25 EPKVIERLNEALFLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLR-IG-Q 102 (182)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC-CC-S
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCC-CC-C
Confidence 45688999999999999999999999999765 588999999999999999999999999888776664443321 11 2
Q ss_pred cchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.+.=++=+.+=.|+-.-..|-.+...-++.. -+.+-++|+....||-.|-++|...++.
T Consensus 103 ~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~---D~~t~~~L~~il~eEe~h~~~l~~~l~~ 161 (182)
T 3fvb_A 103 NVKEVLEADLKGEYDARASYKESREICDKLG---DYVSKQLFDELLADEEGHIDFLETQLDL 161 (182)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333444444444433333333333333333 4556778888889999999999887754
No 32
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=86.97 E-value=0.24 Score=51.05 Aligned_cols=179 Identities=17% Similarity=0.248 Sum_probs=124.0
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccc--cchhhhhh-hhhhhhccccccc--
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS--RDEARHAG-FLNKGLSDFNYAL-- 200 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMa--RDEARHAG-FlNkal~Df~l~l-- 200 (416)
..|++||++-|+..+.-++..+-+|..|..-+.++..+. |-|.+.-.+|+ =||+||+- .+--+..+||..-
T Consensus 96 ~~WqemP~eYR~~LiRlI~~haDSEiagve~e~~wi~~A----PSL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~e 171 (481)
T 3pf7_A 96 DVWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLTA----PSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGRE 171 (481)
T ss_dssp BCBSSCCGGGHHHHHHHHHHHHHHHHHHHHHHTTGGGGC----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred cchhhCCHHHHHHHHHHHHHHhhhHHhhchhhhhHHhcC----CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 369999999999999999999999999999999988877 99988766665 49999996 5766669999873
Q ss_pred --cccc---ccccCc----cccccc--hh--hhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccc-
Q 014877 201 --DLGF---LTKARK----YTFFKP--KF--IFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRH- 266 (416)
Q Consensus 201 --DLgf---Ltk~rk----YTfF~P--kf--IfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRH- 266 (416)
|... .-+.++ +-|=-| .| ++-.+||-+.=|.- +|..--+..|-|+=+=+..=|-+|..|
T Consensus 172 ~ad~LL~R~sGd~~~pk~L~~FNyPt~~WaD~~~f~~LvDrAgi~-------qL~~L~~sSY~PlARamr~I~kEEafH~ 244 (481)
T 3pf7_A 172 EGEALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITDRDGKF-------QLASLAESAFDPLARTCKFMLTEEAHHL 244 (481)
T ss_dssp HHHHHHHCCTTCSSSCCSSGGGSSCCCSHHHHHHHHHHTHHHHHH-------HHHHHTTCSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCcccccccccccCCCCCHHHHHHHHHhhhHHHHH-------HHHHHHhCCcHHHHHHHHHHhhHHHHHH
Confidence 3321 122111 122222 22 24567787776643 344444688999999999999999766
Q ss_pred --hhH-HHHH-------Hh----hCc-----------cchhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChh
Q 014877 267 --GDF-FSAL-------MK----AQP-----------QFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTK 320 (416)
Q Consensus 267 --GDf-Faal-------mr----aqP-----------~ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~ 320 (416)
|+- ...| |+ .+| +++..-.|+.|.+- |-.|-. .|-.+.+=+-+.||--+
T Consensus 245 ~~Ge~gl~rli~~t~e~~~~~gt~d~~~~r~~g~i~l~~~Q~alNrWwp~~--LdmFGp---~~S~ns~~~~~wGLKgr 318 (481)
T 3pf7_A 245 FVGESGIARVIQRTCEVMKELGTDDPAKLRAAGVIDLPTLQKYLNFHYSVT--SDLYGA---EISSNAATYYTNGLKGR 318 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHTTCCCHHHHHHHHHHHHHHH--HGGGCC---SSCHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHHHHHHhhhccCcchhhhhhhcccccHHHHHHHHHHHhHHH--HHHhCC---CCCccHHHHHHhCcCcc
Confidence 542 2223 22 234 36676778889874 334444 46667777888888653
No 33
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=86.95 E-value=5.5 Score=38.23 Aligned_cols=208 Identities=15% Similarity=0.212 Sum_probs=114.5
Q ss_pred HHhhcCChHHHHHHHHHHHh-hhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccccccc---
Q 014877 126 EAADKMQGPLRQIFVEFLER-SCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD--- 201 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLer-ScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD--- 201 (416)
++|.+|+++.|..+.-=|-- +.--.--|-.+ -.+..-+ .+|++.-++...+=.|++|+=.-..-+.-++..-|
T Consensus 65 ~dw~~Lt~~Er~~~~~~l~~~~~~D~~v~~~l-~~l~~~~--~~~e~~~~~~~q~~~E~iHs~sYs~il~tl~~~~e~~~ 141 (346)
T 2rcc_A 65 KQFPTLTETEQEAFKKIIGLLAFLDSVQTDYS-MRAAEYL--TDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDE 141 (346)
T ss_dssp HHGGGSCHHHHHHHHHHHHHHHHTTTTCCCHH-HHHHTTB--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHH
Confidence 57889999998876542221 11111233445 6777777 67999999999999999999877777766654211
Q ss_pred -------ccccccc-----Cccccc--c--c-hhh--hhhhhcccccc-hhhHHHHHHHhhhCCCCcccchhhhhHhhhh
Q 014877 202 -------LGFLTKA-----RKYTFF--K--P-KFI--FYATYLSEKIG-YWRYITIYRHLKANPEFQCYPIFKYFENWCQ 261 (416)
Q Consensus 202 -------LgfLtk~-----rkYTfF--~--P-kfI--fYAtYLSEKIG-YwRYItIyRHLe~~Pe~r~~PIFk~FE~WCq 261 (416)
...|.|+ +-|.=+ . | .+. +-|-++-|.|= |-=|-.|| .|.++. ..-=+=+=.+-=+.
T Consensus 142 ~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lva~~~lEgi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~R 218 (346)
T 2rcc_A 142 IFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFY-NLARNQ--KMVSTSTMINYINR 218 (346)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTTTHHHHHHHH-HHHHTT--SSHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCC--CchhHHHHHHHHHh
Confidence 2223221 001000 0 0 110 01133344443 23344444 455432 11112222333467
Q ss_pred hcccchhHHHHHHh----hCccch----hhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChhhhhHHHHHHhhhh
Q 014877 262 DENRHGDFFSALMK----AQPQFL----NDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRT 333 (416)
Q Consensus 262 DEnRHGDfFaalmr----aqP~ll----~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~t 333 (416)
||.+||+|...+++ ..|++. ..|...|...-.=+= .=|+.+.-.. .-+||++.+....|--.+|..
T Consensus 219 DE~~H~~f~~~l~~~l~~e~~~~~~~e~~~~v~~l~~eav~~E---~~~~~~~~~~---~~~Gl~~~~~~~yi~y~an~~ 292 (346)
T 2rcc_A 219 DEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLE---KDWFRYIIGD---KIPGINPEDMETYISFIANKR 292 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHH---HHHHHHHTTT---CSTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCChhccHHHHHHHHHHHHHHHHHH---HHHHHHHccC---CCCCCCHHHHHHHHHHHHHHH
Confidence 99999999988765 377763 234333333322220 1122222111 378999999988888888877
Q ss_pred hhc-----ccccccccCCh
Q 014877 334 TAR-----IFPAVLDVENP 347 (416)
Q Consensus 334 a~r-----vFP~vLdvd~P 347 (416)
-.+ +||. ...||
T Consensus 293 L~~lG~~~~f~~--~~~nP 309 (346)
T 2rcc_A 293 AVQLGMEKPYPE--IKHNP 309 (346)
T ss_dssp HHHTTCCCSCTT--CCSCS
T ss_pred HHHcCCCCCCCC--CCCCc
Confidence 655 4554 67888
No 34
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=86.56 E-value=0.27 Score=41.16 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=55.4
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
...+.|++++|..= -..+|..+|..-.-+|..+..-. +||++++++...+.+|-+|+|-+=..|..
T Consensus 8 ep~e~Ls~e~~d~~--Rai~sl~~EleAI~~Y~q~a~~~--~d~~~k~vl~~i~~EEkeH~g~~lelLrr 73 (95)
T 3k6c_A 8 EPTQELSDETRDMH--RAIISLREELEAVDLYNQRVNAC--KDKELKAILAHNRDEEKEHAAMLLEWIRR 73 (95)
T ss_dssp SCGGGSCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHhcCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34478888887643 24569999999999999999987 89999999999999999999987776654
No 35
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=85.97 E-value=1.2 Score=37.12 Aligned_cols=127 Identities=15% Similarity=0.156 Sum_probs=96.8
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcc--cccccccccccccCcccccc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD--FNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~D--f~l~lDLgfLtk~rkYTfF~ 215 (416)
.++.|......|+...-.|--+++..++. -|.+++.|.--|.+|..||.-+=+-+.+ .|. + +-.+.+=.
T Consensus 9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~a~~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~----p----~~~~p~~~ 80 (144)
T 1j30_A 9 TAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD----P----ATDKPIGT 80 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC----T----TTSCBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC----C----CcCCCCcc
Confidence 88999999999999999999999988655 5999999999999999999988777776 543 1 11122223
Q ss_pred chhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 216 PKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 216 PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
++=++=..+=.|+--+ -+|-.+...-+.. ..+.+.++|+.=..||-.|.+.|..++..
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~e---gd~~~~~~f~~i~~~E~~H~~~~~~~l~~ 139 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREE---GFPEVAEWFETLARAEKSHAEKFQNVLKQ 139 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666677665 6666666666554 45667788888899999999999988753
No 36
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=85.90 E-value=0.26 Score=47.85 Aligned_cols=43 Identities=21% Similarity=0.027 Sum_probs=36.2
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
+|||...--+++|. +-|-++++..+.+|||++|..|.-..++.
T Consensus 197 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~~~l~~~ 239 (349)
T 2p1i_A 197 SGSFCAIFWFKKQN--KLHGLTFSNELISRDEGLHTDFNCLIYSL 239 (349)
T ss_dssp HHHHHHHHHHHTTT--CSTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcC--CCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888777888876 78999999999999999999887666554
No 37
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=85.30 E-value=0.41 Score=40.64 Aligned_cols=54 Identities=24% Similarity=0.263 Sum_probs=47.8
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
..+=|.-..-.|-.|.-.|+++..+. .+|.++++|.-+++||.+|...|-+-+.
T Consensus 94 ~~~~l~~A~~~E~~a~~fY~~~a~~~--~d~~~k~~~~~la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 94 PYHALRYARDNEIRGMEYYKEAAANS--ADPEVKRLGADFAAEEAEHVVALDKWIE 147 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778889999999999999988 8899999999999999999999877654
No 38
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=85.28 E-value=6.8 Score=37.41 Aligned_cols=206 Identities=11% Similarity=0.144 Sum_probs=107.5
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccc-------
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN------- 197 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaE-FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~------- 197 (416)
++|.+|+++.|..+.-=|--=..++ --|-.+--.+.+-+ .+|++.-+++..+=+|++|+-.-..-+.-++
T Consensus 74 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~~l~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~~ 151 (311)
T 2o1z_A 74 KDFEKLNDNEKHFIKHVLAFFAASDGIVLENLASKFLRQV--KITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERM 151 (311)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHC-------CHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 5788888888876654322111111 12222334455666 6799999999999999999877666555543
Q ss_pred ----cccccccccccC---------ccccccchhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhhc
Q 014877 198 ----YALDLGFLTKAR---------KYTFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDE 263 (416)
Q Consensus 198 ----l~lDLgfLtk~r---------kYTfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDE 263 (416)
-..+...|.++- .-++. =+.|-| ++-|.|=. -=|-.|| .|.++. ..-=+=+=.+-=+.||
T Consensus 152 ~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~-~~lva~--~~lEGi~fysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE 225 (311)
T 2o1z_A 152 NLFHAIENIPAVKNKALWAAKWINDTNSFA-ERIVAN--ACVEGILFSGSFCAIF-WFKKQN--KLHGLTFSNELISRDE 225 (311)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHSSTTSCHH-HHHHHH--HHHHHTTTHHHHHHHH-HHHHTT--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHcCccHHH-HHHHHH--HHHHHHHHHHHHHHHH-HHHHcC--CcccHHHHHHHHHHHH
Confidence 223333333210 00111 122222 13455422 3333344 444432 1111222234446799
Q ss_pred ccchhHHHHHHhh---CccchhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChhhhhHHHHHHhhhhhhcc-cc
Q 014877 264 NRHGDFFSALMKA---QPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARI-FP 339 (416)
Q Consensus 264 nRHGDfFaalmra---qP~ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~ta~rv-FP 339 (416)
.+||+|...+++. +|. ..|...|...-.=+= .-|+.+.-. -..+||+...-...|=-.+|....++ +|
T Consensus 226 ~~H~~f~~~l~~~l~~~~~--~~~i~~l~~eave~E---~~~~~~~~~---~~~~Gl~~~~~~~yi~y~an~~L~~LG~~ 297 (311)
T 2o1z_A 226 GLHTDFNCLIYSLLENKLP--EEVVQNIVKEAVEVE---RSFICESLP---CDLIGMNSRLMSQYIEFVADRLLECLGSP 297 (311)
T ss_dssp HHHHHHHHHHHHTCSSCCC--HHHHHHHHHHHHHHH---HTTBTTTBC---CTTTTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHH---HHHHHHHcc---CCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999875 332 333333322211110 112222211 15789998877777777777776665 55
Q ss_pred cccccCCh
Q 014877 340 AVLDVENP 347 (416)
Q Consensus 340 ~vLdvd~P 347 (416)
-+.+++||
T Consensus 298 ~~y~~~nP 305 (311)
T 2o1z_A 298 KIFHAKNP 305 (311)
T ss_dssp CSSCCCCC
T ss_pred CCCCCCCC
Confidence 55566887
No 39
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=84.88 E-value=0.27 Score=47.28 Aligned_cols=43 Identities=26% Similarity=0.529 Sum_probs=34.8
Q ss_pred ccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhh
Q 014877 149 AEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGL 193 (416)
Q Consensus 149 aEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal 193 (416)
-|-.=.+.|..+++.. ..|.|+++.+..|+||+||.+|--+-+
T Consensus 158 qE~aT~v~y~n~a~~~--~dPvL~~i~~~IA~DE~RH~~~y~~~v 200 (275)
T 1za0_A 158 YERCGAVFCRNLAAQI--EEPILAGLIDRIARDEVRHEEFFANLV 200 (275)
T ss_dssp HHHHHHHHHHHHHHHC--CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555577899999765 799999999999999999998854433
No 40
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=84.72 E-value=0.89 Score=45.09 Aligned_cols=42 Identities=26% Similarity=0.169 Sum_probs=36.1
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhc
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
+|||...--+++|. +-|-++++..+.+|||++|..|.-..++
T Consensus 238 ys~F~~~~~l~~rg--~MpG~~~~i~lI~RDE~lH~~f~~~l~~ 279 (390)
T 1h0o_A 238 SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFK 279 (390)
T ss_dssp HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC--CCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888877888886 7899999999999999999988765555
No 41
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=84.63 E-value=0.31 Score=46.26 Aligned_cols=37 Identities=35% Similarity=0.519 Sum_probs=32.2
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhh
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL 189 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFl 189 (416)
+|||...--+++|. +=|-++++..+.+|||+.|..|.
T Consensus 172 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~ 208 (296)
T 3mjo_A 172 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYI 208 (296)
T ss_dssp HHHTHHHHHHHHTT--SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CcchHHHHHHHHHHHHHHHHHHH
Confidence 38888777888885 78999999999999999998774
No 42
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=83.63 E-value=0.35 Score=46.52 Aligned_cols=37 Identities=35% Similarity=0.519 Sum_probs=32.3
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhh
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL 189 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFl 189 (416)
+|||...--+++|. +=|-++++.++.+|||+.|..|.
T Consensus 173 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~ 209 (329)
T 3dhz_A 173 YSGFYLPMYLSSRA--KLTNTADIIRLIIRDESVHGYYI 209 (329)
T ss_dssp HHHHHHHHHHHTTT--SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCccHHHHHHHHHHHHHHHHHHH
Confidence 38888888888876 78999999999999999998774
No 43
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=83.45 E-value=0.37 Score=46.10 Aligned_cols=37 Identities=32% Similarity=0.467 Sum_probs=32.4
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhh
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL 189 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFl 189 (416)
+|||...--+++|. +=|-++++.++.+|||+.|..|.
T Consensus 163 ys~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~f~ 199 (319)
T 3n37_A 163 YSGFWLPMYFSSRG--KLTNTADLIRLIIRDEAVHGYYI 199 (319)
T ss_dssp HHHHHHHHHHHHTT--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHhHHHHHHHH
Confidence 38888888898885 78999999999999999998763
No 44
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=83.24 E-value=0.74 Score=40.81 Aligned_cols=114 Identities=16% Similarity=0.106 Sum_probs=75.0
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh
Q 014877 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF 218 (416)
Q Consensus 140 idFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~Pkf 218 (416)
++.|...-..|...---|-=.++.-++. .|.|+++|.-.|.+|..||.-+=+.|.+.| -....|..
T Consensus 8 ~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~i~--~t~enL~~----------- 74 (170)
T 3pwf_A 8 KKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLG--KTPENLQM----------- 74 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHH-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ChHHHHHH-----------
Confidence 5667777778887776666566555544 899999999999999999985555565421 11111111
Q ss_pred hhhhhhcccc----cchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 219 IFYATYLSEK----IGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 219 IfYAtYLSEK----IGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
-.-.|. -.|-.+|.+= -+-.++-|-++|+.=..||-+|+|.|..++..
T Consensus 75 ----a~~gE~~e~~~mY~~~a~~A------~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~ 126 (170)
T 3pwf_A 75 ----GIEGETFEVEEMYPVYNKAA------EFQGEKEAVRTTHYALEAEKIHAELYRKAKEK 126 (170)
T ss_dssp ----HHHHHHHHHHTHHHHHHHHH------HHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHhHHHHHHHHHHHHHHHH------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1222333332 34456778889999999999999999988765
No 45
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=83.07 E-value=1.6 Score=39.51 Aligned_cols=131 Identities=13% Similarity=0.117 Sum_probs=85.5
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccchh
Q 014877 140 VEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKF 218 (416)
Q Consensus 140 idFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~Pkf 218 (416)
++-|......|....-.|..+++..++. .+.++.+|...|.+|..||.-+-+.|.+.|-.+.+ -+.....+. ...=
T Consensus 30 ~~nL~~a~~gE~~a~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i-~~~p~~~~g--st~e 106 (202)
T 1yuz_A 30 LENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEK-PTVAAPSAY--SCDL 106 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-CCC--CCCC--CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccCCccCCC--CHHH
Confidence 5677778888888888899888887665 79999999999999999999999999876544333 111000000 1111
Q ss_pred hhhhhhcccccchhhHHHHHHHhhhC-CCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 219 IFYATYLSEKIGYWRYITIYRHLKAN-PEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 219 IfYAtYLSEKIGYwRYItIyRHLe~~-Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.+=+.+=-|. --+...|..+-+- -+-.++.+.++|+.=..+|-+|++-|..++..
T Consensus 107 nL~~a~~gE~---~E~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll~~ 162 (202)
T 1yuz_A 107 NLISGANGEI---YETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYND 162 (202)
T ss_dssp HHHHHHHHHH---HHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHH---HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111220 1222223322111 13457789999999999999999999998864
No 46
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=82.16 E-value=8.6 Score=36.14 Aligned_cols=207 Identities=14% Similarity=0.154 Sum_probs=101.4
Q ss_pred HHhhcCChHHHHHHHHHHHhhhh-cc-ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccccc-----
Q 014877 126 EAADKMQGPLRQIFVEFLERSCT-AE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY----- 198 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScT-aE-FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l----- 198 (416)
++|..|+++.|. |+..+-.--| ++ -.|--+...++.-+ .+|++.-.++..+=.|+.|+-.-..-+.-++.
T Consensus 50 ~dw~~L~~~Er~-~~~~~l~~~~~~D~iv~~~l~~~~~~~v--~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e~ 126 (286)
T 3olj_A 50 QHWESLKPEERY-FISHVLAFFAASDGIVNENLVERFSQEV--QITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKER 126 (286)
T ss_dssp HHHHHSCHHHHH-HHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 577788888877 3333322111 11 01112233344444 68999999999999999999876555544432
Q ss_pred ------ccccccccccCcc----------ccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhh
Q 014877 199 ------ALDLGFLTKARKY----------TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (416)
Q Consensus 199 ------~lDLgfLtk~rkY----------TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqD 262 (416)
-.+...|.|+-++ +|.+ +.|-+ ++-|.|-|-=..++.-.|.++. ..--+=+=.+-=+.|
T Consensus 127 ~~~f~~~~~~p~l~~K~~~~~~~~~~~~~~~~~-~lva~--~~lEgi~f~~~F~~~~~l~~~g--~m~g~~~~i~~I~RD 201 (286)
T 3olj_A 127 EFLFNAIETMPCVKKKADWALRWIGDKEATYGE-RVVAF--AAVEGIFFSGSFASIFWLKKRG--LMPGLTFSNELISRD 201 (286)
T ss_dssp HHHHTHHHHCGGGHHHHHHHHHHHHCSSSCHHH-HHHHH--HHHHHTTTHHHHHHHHHHHHTT--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHhCChhHHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHCC--CchhHHHHHHHHHHH
Confidence 2334444442110 0100 11111 1333333211111111333221 111111222344679
Q ss_pred cccchhHHHHHHhhCccc-hhhhhhHHHHHHHHHHHHH-hhhhhhccchhHHhhcCCChhhhhHHHHHHhhhhhhcc-cc
Q 014877 263 ENRHGDFFSALMKAQPQF-LNDWKAKLWARFFCLSVYV-TMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARI-FP 339 (416)
Q Consensus 263 EnRHGDfFaalmraqP~l-l~g~~~kLW~RFFLLsVfa-TMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~ta~rv-FP 339 (416)
|..||+|...+.+.--+- ...+...+ +-=+|=. .=|+++.- + +..+||+.......|=-.+|..-.++ +|
T Consensus 202 E~~H~~~~~~l~~~l~~~~~~~~v~~~----~~eave~E~~~~~~~l-~--~~~~Gl~~~~~~~yi~y~An~~L~~lG~~ 274 (286)
T 3olj_A 202 EGLHCDFACLMFKHLVHKPSEERVREI----IINAVRIEQEFLTEAL-P--VKLIGMNCTLMKQYIEFVADRLMLELGFS 274 (286)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHH----HHHHHHHHHHHHHTTS-C--GGGGTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHH----HHHHHHHHHHHHHHHc-C--CCcCCCCHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999987631111 11111111 1111100 01222221 1 57789998888888877788776654 55
Q ss_pred cccccCCh
Q 014877 340 AVLDVENP 347 (416)
Q Consensus 340 ~vLdvd~P 347 (416)
-+.+++||
T Consensus 275 ~~f~~~nP 282 (286)
T 3olj_A 275 KVFRVENP 282 (286)
T ss_dssp CSSCCCCC
T ss_pred CCCCCCCC
Confidence 55567777
No 47
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=80.04 E-value=0.57 Score=45.09 Aligned_cols=37 Identities=27% Similarity=0.190 Sum_probs=31.7
Q ss_pred ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhh
Q 014877 151 FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFL 189 (416)
Q Consensus 151 FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFl 189 (416)
+|||...--+++|. +=|-++++..+.+|||+.|..|.
T Consensus 181 ysgF~~~~~l~~~g--~m~g~~~~i~~I~RDE~lH~~f~ 217 (324)
T 4a58_A 181 ISSFYSIALLRVRG--LMPGICLANNYISRDELLHTRAA 217 (324)
T ss_dssp HHHHHHHHHHHHHT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CchhHHHHHHHHHHHHHHHHHHH
Confidence 47887666788876 78999999999999999999874
No 48
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=79.41 E-value=2.2 Score=40.21 Aligned_cols=49 Identities=24% Similarity=0.121 Sum_probs=36.7
Q ss_pred HHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhc
Q 014877 142 FLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 142 FLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
+||. +-- +|||...-=+++|. +=|-++++..+.+|||+.|..|.-.-.+
T Consensus 166 ~lEg-i~f-~~~F~~~~~l~~~g--~m~g~~~~i~~I~RDE~~H~~~~~~l~~ 214 (286)
T 3olj_A 166 AVEG-IFF-SGSFASIFWLKKRG--LMPGLTFSNELISRDEGLHCDFACLMFK 214 (286)
T ss_dssp HHHH-TTT-HHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHH-HHHHHHHHHHHHCC--CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554 433 67777555677765 7799999999999999999988654443
No 49
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=79.22 E-value=4.3 Score=34.66 Aligned_cols=135 Identities=16% Similarity=0.222 Sum_probs=107.3
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~P 216 (416)
..++-|-+-...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.|-.++++-+.+-+ -.|=.+
T Consensus 5 ~~~~~Ln~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~-~~~~~~ 83 (167)
T 1krq_A 5 EVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPE-QNFKSL 83 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCC-CCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC-CCcCCH
Confidence 467888889999999999999888877655 599999999999999999999989999999999888776542 333456
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.=++=+..=-||.---.|-.++..-+++-+ +.+.++|+.--.||-.|.+-+.-++..
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~D---~~~~~~l~~~l~Eq~e~~~~l~~~l~~ 140 (167)
T 1krq_A 84 LDVFEKTYEHEQFITKSINTLVEHMLTHKD---YSTFNFLQWYVSEQHEEEALFRGIVDK 140 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677778888899999999999999887744 455566664456677799888776643
No 50
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=78.80 E-value=4.7 Score=32.97 Aligned_cols=132 Identities=12% Similarity=0.010 Sum_probs=94.3
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc-
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF- 214 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF- 214 (416)
+..++.|-+-...|+.-...|.-++..+++. -+.+++.|.-.|-+|..||--|=+-+.+.|-...+ -+.+ ....
T Consensus 5 ~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~~---~~~~~ 80 (154)
T 3r2k_A 5 PEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPDD---IHPGT 80 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCC---CCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCC---CCCCC
Confidence 3478889999999999999999999999765 58899999999999999999999988888866555 2221 1121
Q ss_pred cchhhhhhhhcccccchhhHHHHHHHhhhCC-CCcccchhhhhHhhhhh-cccchhHHHHHHhh
Q 014877 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANP-EFQCYPIFKYFENWCQD-ENRHGDFFSALMKA 276 (416)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~P-e~r~~PIFk~FE~WCqD-EnRHGDfFaalmra 276 (416)
.+.=++=+.+=.|+- -|..||.+-+-- +..-+.+-++|+....| |-.|-++|...++.
T Consensus 81 ~~~e~l~~~l~~E~~----~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~ 140 (154)
T 3r2k_A 81 TVPEMLEADLKLERH----VRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGL 140 (154)
T ss_dssp SHHHHHHHHHHHHHH----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233334444444444 444455443322 12455667778888999 99999999887753
No 51
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=78.35 E-value=2.4 Score=36.41 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=78.9
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cCccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccch
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPK 217 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~-~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~Pk 217 (416)
-++.|...-..|...---|-=.++.-++ -.|.|+++|.-.|.+|..||.-+=+.|.+.|-. +-|+ ..=..+
T Consensus 13 t~~nL~~afagEs~A~~~Y~~~A~~A~~eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~~p-~~~~-------~~~~T~ 84 (144)
T 4di0_A 13 TEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDP-ATGL-------PFGTSR 84 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTSC-------CCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-ccCC-------CCCcHH
Confidence 5778888888898888777766666544 389999999999999999999766777765411 1110 000001
Q ss_pred hhhhhhhcccc----cchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 218 FIFYATYLSEK----IGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 218 fIfYAtYLSEK----IGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
=-+-+-.=.|. -.|-.|+.+=|-- -+.-|=++|+.=+.||-+|++-|..++.
T Consensus 85 enL~~A~~GE~~e~~~~Y~~~a~~A~~e------G~~~ia~~f~~~a~~E~~Ha~~~~~~l~ 140 (144)
T 4di0_A 85 QNLQSAIAGETHEYTDMYPGMAKTARDE------GFEEIANWFETLAKAERSHANRYTKALD 140 (144)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHC------CcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111111 1233334433322 3556779999999999999999998876
No 52
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=77.72 E-value=1.1 Score=38.13 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=48.3
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
..+-|.-..-.|-...-+|+++.... ++|.++++|.-+++||.+|.-.|-+.+..
T Consensus 106 ~~~~L~~ai~~E~~a~~~Y~~~a~~~--~d~~~r~l~~~ia~eE~~H~~~l~~~l~~ 160 (175)
T 2fzf_A 106 IIDLIRWAMKAEEIAAEFYLKLEEMV--KEEEKKRLMRYLADMERGHYYTLRAEYEL 160 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS--CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888889999999999999998 57999999999999999999988776554
No 53
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=75.87 E-value=0.82 Score=45.26 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=35.9
Q ss_pred cccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhc
Q 014877 150 EFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 150 EFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
|-.-++-|..++|.-+.. .|.|+++.+..|+||+||.+|--+-++
T Consensus 171 E~AT~vsh~n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~ 216 (338)
T 2uw1_A 171 ERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVE 216 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444456777777764444 999999999999999999999877776
No 54
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=73.82 E-value=7.3 Score=32.82 Aligned_cols=134 Identities=15% Similarity=0.138 Sum_probs=100.6
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~P 216 (416)
..++-|-+-...|+....+|--++.-.++. -|.+++.|.-.|-+|..||--|=+-+.+.|-.++++-+.+.+ -.|-.+
T Consensus 5 ~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~-~~~~~~ 83 (174)
T 2jd6_0 5 RMLKALNDQLNRELYSAYLYFAMAAYFEDLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPP-KEWESP 83 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCC-cCcCCH
Confidence 457788888899998888888887766533 478999999999999999999999999999998887776653 334456
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
+=++=+..=.||-.-..|-.+...-++.-+ +..-++++...++|-.|...+..++.
T Consensus 84 ~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D---~~t~~~l~~~l~eq~e~~~~l~~~l~ 139 (174)
T 2jd6_0 84 LKAFEAAYEHEKFISKSIYELAALAEEEKD---YSTRAFLEWFINEQVEEEASVKKILD 139 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666677666666666666665544 45666777677888888888776654
No 55
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=72.80 E-value=8.2 Score=32.76 Aligned_cols=135 Identities=16% Similarity=0.226 Sum_probs=108.2
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~P 216 (416)
..++-|-+=...|+...-.|--+++-.++. -|-+++.|.-.|-+|-.||--+=+-+.+.|-.++++-+.+-.. .|=.+
T Consensus 5 ~~~~~LN~~i~~El~A~~~Yl~~a~~~~~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~-~~~~~ 83 (165)
T 1eum_A 5 EMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA-EYSSL 83 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-CCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC-CCCCH
Confidence 466777777888999988898888777655 5999999999999999999988888999999999988776554 44467
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.=++=+..=-||.---.|-.+++.-+++- .+.+.++|+.--.||-.|-+-+.-++..
T Consensus 84 ~e~l~~al~~E~~~~~~~~~l~~~a~~~~---D~~~~~fl~~~l~eq~e~~~~l~~~l~~ 140 (165)
T 1eum_A 84 DELFQETYKHEQLITQKINELAHAAMTNQ---DYPTFNFLQWYVSEQHEEEKLFKSIIDK 140 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888889999999999999988764 4556677774457788888887766543
No 56
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=72.05 E-value=23 Score=35.02 Aligned_cols=214 Identities=14% Similarity=0.144 Sum_probs=107.9
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhc-cccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccccc------
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTA-EFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY------ 198 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTa-EFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l------ 198 (416)
++|.+|+++.|..+.-=|--=..+ ..-|-.+-..+..-+ ..|++.-++...+=.|++|+-.-..-+.-++.
T Consensus 115 ~dw~~Lt~~Er~~~~~vla~fa~~Dsiv~~nl~~~~~~~v--~~pE~~~~~~~Q~~~EaiHsesYS~il~tl~~d~~e~~ 192 (390)
T 1h0o_A 115 QHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEV--QVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKERE 192 (390)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 577888888887654322111111 011222223344545 68999988888888899998776666555432
Q ss_pred -----ccccccccccC----------ccccccchhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhh
Q 014877 199 -----ALDLGFLTKAR----------KYTFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (416)
Q Consensus 199 -----~lDLgfLtk~r----------kYTfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~r~~PIFk~FE~WCqD 262 (416)
..+...|.|+= +-++.+ +.|-| ++-|-|=+ -=|..| -.|.++. ..-=+=+=.+-=+.|
T Consensus 193 ~if~~~~~~p~l~~Ka~~i~~~~~~~~~~~~~-~lva~--~~lEGi~Fys~F~~~-~~l~~rg--~MpG~~~~i~lI~RD 266 (390)
T 1h0o_A 193 YLFNAIETMPCVKKKADWALRWIGDKEATYGE-RVVAF--AAVEGIFFSGSFASI-FWLKKRG--LMPGLTFSNELISRD 266 (390)
T ss_dssp HHHTHHHHCHHHHHHHHHHHHHHHCSSSCHHH-HHHHH--HHHHHHHHHHHHHHH-HHHHHTT--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHhccchhHHH-HHHHH--HHHHHHHHHHHHHHH-HHHHHcC--CCccHHHHHHHHHHH
Confidence 22333333210 011221 22222 33455532 222222 2344432 111122223444679
Q ss_pred cccchhHHHHHHhhCcc-chhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChhhhhHHHHHHhhhhhhcc-ccc
Q 014877 263 ENRHGDFFSALMKAQPQ-FLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARI-FPA 340 (416)
Q Consensus 263 EnRHGDfFaalmraqP~-ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~ta~rv-FP~ 340 (416)
|.+||+|...+++.--+ +...+...|.....=+ =.-|+.+.- | +..+||+...-...|=-.+|..-.++ +|-
T Consensus 267 E~lH~~f~~~l~~~l~~~~~~~~v~el~~eave~---E~~~~~~~~-~--~~~iGl~~~~~~~YI~y~Anr~L~~LG~~~ 340 (390)
T 1h0o_A 267 EGLHCDFACLMFKHLVHKPAEQRVREIITNAVRI---EQEFLTEAL-P--VKLIGMNCTLMKQYIEFVADRLMLELGFNK 340 (390)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHH---HHHHHHTTS-C--GGGGTCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHH---HHHHHHHhc-c--CCcCCCCHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999874211 1122222222211110 011222322 1 67899998887777777777776655 455
Q ss_pred ccccCChh-hHHHH
Q 014877 341 VLDVENPE-FKRRL 353 (416)
Q Consensus 341 vLdvd~P~-F~~~L 353 (416)
+.++.||- |.+.+
T Consensus 341 ~y~~~NP~~wm~~~ 354 (390)
T 1h0o_A 341 IFRVENPFDFMENI 354 (390)
T ss_dssp SSCCCCSCGGGC--
T ss_pred CCCCCCChHHHHhh
Confidence 55568995 55543
No 57
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=71.01 E-value=25 Score=35.24 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=111.1
Q ss_pred HHhh-cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc--cCccHHHHhhccccchhhhhhhhhhhhcccc-----
Q 014877 126 EAAD-KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK--TNPVVAEIFSLMSRDEARHAGFLNKGLSDFN----- 197 (416)
Q Consensus 126 ~~~d-~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~--~NP~lae~F~lMaRDEARHAGFlNkal~Df~----- 197 (416)
.+|. .|+++.|..+.-=|--=..++ |.+ =..+.-++.. ..|++.-++...+=.|++|+-.-..-+.-++
T Consensus 140 ~dw~~~Lt~~Er~~~~~vLa~fa~~D--siv-~~nl~~~l~~~v~~pE~~~~~~~Q~~~EaIHsesYS~il~tl~~d~~e 216 (419)
T 1jk0_A 140 HDWNNRMNENERFFISRVLAFFAASD--GIV-NENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKE 216 (419)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHTTS--SHH-HHHHCCCCCTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHH--HHH-HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 5788 999999886654322211222 111 1222222322 4799988888888889999876555554433
Q ss_pred ------cccccccccccC----------ccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhh
Q 014877 198 ------YALDLGFLTKAR----------KYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQ 261 (416)
Q Consensus 198 ------l~lDLgfLtk~r----------kYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCq 261 (416)
-..+...|.|.- +-++.+ +.|-| ++-|-|=|-=+-++.-.|.++. ..-=+=+=.+-=+.
T Consensus 217 ~~~iF~~i~~~p~L~~Ka~~i~~~~~~~~~~~~~-~lva~--~~lEGI~fsg~Fa~~~~l~~rg--~MpG~~~~i~lI~R 291 (419)
T 1jk0_A 217 SEFLFNAIHTIPEIGEKAEWALRWIQDADALFGE-RLVAF--ASIEGVFFSGSFASIFWLKKRG--MMPGLTFSNELICR 291 (419)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSSCCHHH-HHHHH--HHHHHTTTHHHHHHHHHHHHTT--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhccchhHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHcC--CCccHHHHHHHHHH
Confidence 223333333211 111221 22333 4457665543333223455542 22222233344567
Q ss_pred hcccchhHHHHHHhhCcc-chhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChhhhhHHHHHHhhhhhhcc-cc
Q 014877 262 DENRHGDFFSALMKAQPQ-FLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARI-FP 339 (416)
Q Consensus 262 DEnRHGDfFaalmraqP~-ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~ta~rv-FP 339 (416)
||.+||+|...+++.--+ .-..+...|.....=+ =.-|+.+.- | +..+||+...-...|=-.+|..-.++ +|
T Consensus 292 DE~lH~~f~~~l~~~l~~~~~~e~v~el~~eave~---E~~~~~~~l-p--~~liGln~~~~~~YI~Y~Anr~L~~LG~~ 365 (419)
T 1jk0_A 292 DEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEI---EQRYFLDAL-P--VALLGMNADLMNQYVEFVADRLLVAFGNK 365 (419)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHH---HHHHHHTTS-C--GGGGTCCHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHH---HHHHHHHhc-c--CCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999988874111 0122222222111110 112333332 1 67999998888888877788776665 55
Q ss_pred cccccCChh-hHHH
Q 014877 340 AVLDVENPE-FKRR 352 (416)
Q Consensus 340 ~vLdvd~P~-F~~~ 352 (416)
-+.++.||- |.+.
T Consensus 366 ~~y~~~NP~~wm~~ 379 (419)
T 1jk0_A 366 KYYKVENPFDFMEN 379 (419)
T ss_dssp CSSCCCCCCGGGGC
T ss_pred CCCCCCCChHHHHH
Confidence 555669994 5543
No 58
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=70.35 E-value=2.3 Score=42.19 Aligned_cols=55 Identities=16% Similarity=0.301 Sum_probs=38.9
Q ss_pred chhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh----hCccchhhh
Q 014877 230 GYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK----AQPQFLNDW 284 (416)
Q Consensus 230 GYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr----aqP~ll~g~ 284 (416)
+|-|+|+-+-.+..+-...-.|...|-..|--.||||||...--+. .+|..+...
T Consensus 85 tY~~~L~~~fgvrd~~g~~~~~w~~w~~~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~~ 143 (338)
T 2uw1_A 85 TYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEKT 143 (338)
T ss_dssp HHHHHHTTSTTTSCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHH
T ss_pred HHHHHHHHHcCcccccCCCcchHHHHhhhHhHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 4566665555554433333578899999999999999999876554 777777543
No 59
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=68.47 E-value=2.6 Score=40.54 Aligned_cols=37 Identities=14% Similarity=0.237 Sum_probs=29.1
Q ss_pred cchhhhhHhhhhhcccchhHHHHHH----hhCccchhhhhh
Q 014877 250 YPIFKYFENWCQDENRHGDFFSALM----KAQPQFLNDWKA 286 (416)
Q Consensus 250 ~PIFk~FE~WCqDEnRHGDfFaalm----raqP~ll~g~~~ 286 (416)
.|.-.|-..|=-.||||||....-+ +.+|..+...+.
T Consensus 94 ~~w~~w~~~WtaEE~rHg~aL~~YL~~sg~vdp~~lE~~~~ 134 (275)
T 1za0_A 94 DWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRV 134 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC
T ss_pred chHHHHhhhHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 5688899999999999999988655 367777665433
No 60
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=67.51 E-value=11 Score=32.53 Aligned_cols=135 Identities=14% Similarity=0.173 Sum_probs=100.3
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~P 216 (416)
..++-|-+-...|+....+|--++.-.+.. -|.+++.|.-.|-+|..||.-|=+-+.+.|-.++++-+.+... .|-.+
T Consensus 10 ~v~~~LN~~la~El~a~~~Yl~~a~~~~~~gf~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~-~~~~~ 88 (189)
T 3oj5_A 10 KFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRN-QFDRP 88 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC-CCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCC-CCCCH
Confidence 467888888899998888888787776544 4889999999999999999999999999999988877666532 23355
Q ss_pred hhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 217 KFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 217 kfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+=++=+..=.||..-..|-.+...-++.- -+..-++++..-++|-.|-..+..++..
T Consensus 89 ~e~l~~~l~~E~~~~~~~~~l~~~A~~~~---D~~t~~~l~~~l~eqe~~~~~l~~~l~~ 145 (189)
T 3oj5_A 89 REALALALDQERTVTDQVGRLTAVARDEG---DFLGEQFMQWFLQEQIEEVALMATLVRV 145 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666667765555555555555543 4556677776778888898888877643
No 61
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=67.34 E-value=8.2 Score=31.72 Aligned_cols=75 Identities=11% Similarity=0.175 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcC-------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHH
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~la 172 (416)
+++..+...+ |.|..-.+--+||...+..+ .+...++.++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.
T Consensus 88 ~~~~~~F~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~ 164 (198)
T 2r2i_A 88 QKLRWYFKLY--DVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ-KDEVLL 164 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT-TCHHHH
T ss_pred HHHHHHHHHh--cCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-cCHHHH
Confidence 3344444433 55666666667776655544 1122233333444445555678888888877665 577777
Q ss_pred HHhhc
Q 014877 173 EIFSL 177 (416)
Q Consensus 173 e~F~l 177 (416)
+++..
T Consensus 165 ~~~~~ 169 (198)
T 2r2i_A 165 DILTR 169 (198)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 77653
No 62
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=66.64 E-value=15 Score=27.12 Aligned_cols=85 Identities=15% Similarity=0.100 Sum_probs=53.8
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhh----cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP 169 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP 169 (416)
...+.+++++.+++.+ |.|..-.+--+||...+. ...+..... +.-+-+.+-..=+|.|-+.|+.+-++...+
T Consensus 30 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~-~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~ 106 (134)
T 1jfj_A 30 RAIKNEQLLQLIFKSI--DADGNGEIDQNEFAKFYGSIQGQDLSDDKIG-LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106 (134)
T ss_dssp CCSSHHHHHHHHHHHH--CSSCCSEEEHHHHHHHTTCSSCCSSHHHHHH-HHHHHHHHCCSSSSEEEHHHHHHHHTTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCeEcHHHHHHHHHHhcccccCCCHHH-HHHHHHHHCCCCCCccCHHHHHHHHHHhCH
Confidence 4555677888888766 555555677778877663 222223333 445555666777899999999887764433
Q ss_pred c-HHHHhhccccc
Q 014877 170 V-VAEIFSLMSRD 181 (416)
Q Consensus 170 ~-lae~F~lMaRD 181 (416)
. +.++|..+..|
T Consensus 107 ~~~~~~~~~~D~~ 119 (134)
T 1jfj_A 107 EKVAEQVMKADAN 119 (134)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHhCCC
Confidence 2 66777666554
No 63
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=66.46 E-value=14 Score=30.00 Aligned_cols=71 Identities=18% Similarity=0.164 Sum_probs=51.4
Q ss_pred cCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 93 id~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
+...+..++++.++..+ |.|..-.+-=+||...+.....+.+..-+.-+-+.+-..=+|.|-..|+.+-++
T Consensus 66 ~~~~~~~~~~~~~~~~~--D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 136 (204)
T 3e3r_A 66 LGLVLDQAEAEGVCRKW--DRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYS 136 (204)
T ss_dssp TTCCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCC
T ss_pred cCCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHc
Confidence 35566778888888887 555555666678877777665555555566666666777889999999988775
No 64
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=66.08 E-value=2.4 Score=36.47 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=43.5
Q ss_pred HHHHHhhhhccccch-hhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 140 VEFLERSCTAEFSGF-LLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 140 idFLerScTaEFSGf-lLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
.+-|+.+.-.|-.-+ -.|.+..+.-++. .+.++.+|..+++||.+|+.-.-+.|..
T Consensus 84 ~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~~~~~~l~~ 141 (144)
T 4di0_A 84 RQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDG 141 (144)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456666667776665 3677666665544 8999999999999999999998888764
No 65
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=65.13 E-value=9 Score=33.17 Aligned_cols=135 Identities=15% Similarity=0.127 Sum_probs=110.4
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++-|-+=.+.|+...-+|--+++-..+. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+- .-.|=.
T Consensus 6 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p-~~~~~~ 84 (173)
T 1s3q_A 6 EKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEP-PSEWDS 84 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCCCC
Confidence 3467888888899999999999988877655 48999999999999999999999999999999999988776 344556
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
+.=++=+.+=-||.--..|-.++..-+++-++.-.- |++.--.||-.|-+-+.-++.
T Consensus 85 ~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~---fle~~l~eq~e~~~~l~~~l~ 141 (173)
T 1s3q_A 85 PLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYN---FLQWYVAEQVEEEASALDIVE 141 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 778888889999999999999999998876655554 454345778888888776654
No 66
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=64.47 E-value=9.8 Score=31.98 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=38.5
Q ss_pred ccCCCCcccCchhHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhh
Q 014877 112 DYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~ 176 (416)
|.|..-++--+||...+..+ .+...++-++-+-+.+-..=+|.|-|.|+.+-+. ++|.+.++|.
T Consensus 103 D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~ 172 (211)
T 2ggz_A 103 DADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA-KDQDLLEIVY 172 (211)
T ss_dssp CTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-TTTTTHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-hCHHHHHHHh
Confidence 66666667777776655433 2222223333333444445578888888887765 6788887777
No 67
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=63.75 E-value=11 Score=30.35 Aligned_cols=65 Identities=14% Similarity=0.242 Sum_probs=38.0
Q ss_pred ccCCCCcccCchhHHHhhcC----C--------hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhc
Q 014877 112 DYNQTHFVRNKEFKEAADKM----Q--------GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~--------~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~l 177 (416)
|.|..-.+--+||...+..+ . +.....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|..
T Consensus 109 D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1fpw_A 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK-VDPSIIGALNL 185 (190)
T ss_dssp CSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH-SSTTHHHHHHH
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHHhh
Confidence 55665666666775554431 0 112222233333444555678888888888775 67888887765
No 68
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=63.34 E-value=1.1 Score=38.62 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=56.6
Q ss_pred HHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhc
Q 014877 125 KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 125 ~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
+..+....+...+++.+-|-....||.|-..+|..|.... -|.....++.-..+||-||.|..-....
T Consensus 19 ~~~~~~~~~~~~~el~~lIr~~ikaE~~AI~~Y~qLA~~A--P~ee~k~iI~eIr~DE~rH~~~F~~lY~ 86 (115)
T 2hz8_A 19 KEVLKKAKEGDEQELARLIQEIVKAEKQAVKVYKEAAEKA--RNPEKRQVIDKILEDEEKHIEWLKAASK 86 (115)
T ss_dssp HHHHHHHHHTCHHHHTTTHHHHHHHHHHHHHHHHHHHHSC--CCTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555677788888888899999999999999977 7888999999999999999998877766
No 69
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=63.23 E-value=6.1 Score=38.00 Aligned_cols=210 Identities=19% Similarity=0.195 Sum_probs=109.2
Q ss_pred HHhh--cCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccccc---
Q 014877 126 EAAD--KMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA--- 199 (416)
Q Consensus 126 ~~~d--~l~~e~R~~FidFLerScTaE-FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~--- 199 (416)
++|. +|+++.|..+.-=|--=..++ --|-.+--.+..-+ ++|++..++...+-.||+|+-.-..-+.-++..
T Consensus 63 ~dw~~~~Lt~~Er~~~~~~l~~~~~~D~iv~~~~~~~l~~~v--~~~E~~~~l~~q~~~EaiHs~sYs~il~tl~~~~~e 140 (346)
T 1syy_A 63 ELWKSDRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHV--TNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE 140 (346)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Confidence 4777 899988887654322111111 11222222344555 589999999999999999987766666555432
Q ss_pred -----cccccccccC-----ccccc-c-----------chhh-hhhh--hcccccc-hhhHHHHHHHhhhCCCCcccchh
Q 014877 200 -----LDLGFLTKAR-----KYTFF-K-----------PKFI-FYAT--YLSEKIG-YWRYITIYRHLKANPEFQCYPIF 253 (416)
Q Consensus 200 -----lDLgfLtk~r-----kYTfF-~-----------PkfI-fYAt--YLSEKIG-YwRYItIyRHLe~~Pe~r~~PIF 253 (416)
.+...|.|+= -|.=+ . ..+. =+.. .+-|.|= |-=|-.|| .|.++. ..-=+=
T Consensus 141 ~f~~~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~lva~~~~lEGi~FysgF~~~~-~l~~~g--~m~g~~ 217 (346)
T 1syy_A 141 IFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMIL-SFHRQN--KMIGIG 217 (346)
T ss_dssp HTTHHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHH-HHHHTT--SSHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCC--CchhHH
Confidence 1122222211 12111 0 0111 0111 1456652 23333333 444432 121222
Q ss_pred hhhHhhhhhcccchhHHHHHHh----hCccch----hhhhhHHHHHHHHHHHHHhhhhhhccchhHHhh-cCCChhhhhH
Q 014877 254 KYFENWCQDENRHGDFFSALMK----AQPQFL----NDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEG-IGLDTKEFDM 324 (416)
Q Consensus 254 k~FE~WCqDEnRHGDfFaalmr----aqP~ll----~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~a-lGld~~~yD~ 324 (416)
+=.+-=+.||.+||+|...+++ ..|++. ..|...|...-.=+= .-|+. -.|+.. +||++.+...
T Consensus 218 ~~i~~I~RDE~~H~~f~~~l~~~~~~e~p~~~~~e~~~~v~~l~~eav~~E---~~~~~----~~l~~~~~Gln~~~~~~ 290 (346)
T 1syy_A 218 EQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLE---IEYAQ----DCLPRGILGLRASMFID 290 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH---HHHHH----HHCSSCBTTBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCChhhhHHHHHHHHHHHHHHHHHH---HHHHH----HhccCCCCCCCHHHHHH
Confidence 2234446799999999988765 367754 233222222111100 01111 124444 8999999999
Q ss_pred HHHHHhhhhhhcc-cccccccCCh
Q 014877 325 HVIIETNRTTARI-FPAVLDVENP 347 (416)
Q Consensus 325 ~Vi~~TN~ta~rv-FP~vLdvd~P 347 (416)
.|--.+|..-.++ +|-+.+.+||
T Consensus 291 yi~y~an~rL~~lG~~~~y~~~np 314 (346)
T 1syy_A 291 YVQHIADRRLERIGLKPIYHTKNP 314 (346)
T ss_dssp HHHHHHHHHHHHTTCCCSSCCCCS
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCC
Confidence 8888888886654 4444445666
No 70
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=62.71 E-value=1.2 Score=40.31 Aligned_cols=149 Identities=17% Similarity=0.240 Sum_probs=89.8
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccc-hhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFL 189 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSG-flLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFl 189 (416)
.||+.-|.--+-|=+.+..++. -++-|..+-..|-.- --.|...++.-++. .|.|+.+|.-.|..|..||.-.
T Consensus 3 ~~~~~~~~~~~~~f~~~~~i~~-----T~eNL~~A~~GE~~E~~~~Y~~fA~~A~~EG~~~IA~~F~~~A~~E~~HA~r~ 77 (179)
T 3qhb_A 3 NYNQEDFMGLDRFFQDAVSHNN-----TDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLL 77 (179)
T ss_dssp SSCCCCGGGGGGGCCCCCCCSS-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHhHHHHHHHhcccCc-----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 5788777766655444444543 356777777777766 33566666655544 8999999999999999999988
Q ss_pred hhhhcccccccc------cccccccCccccccchhhhhhhh------cc--------c-ccchhhHHHHHHHhhhCCCCc
Q 014877 190 NKGLSDFNYALD------LGFLTKARKYTFFKPKFIFYATY------LS--------E-KIGYWRYITIYRHLKANPEFQ 248 (416)
Q Consensus 190 Nkal~Df~l~lD------LgfLtk~rkYTfF~PkfIfYAtY------LS--------E-KIGYwRYItIyRHLe~~Pe~r 248 (416)
-+.|........ +..+. .-.| |..++=.|- |- | .-.|-.|+-+=| +--
T Consensus 78 ~kll~~l~~~~~~~~~~~~~~v~-~~~~----p~~~~~~T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~------eEG 146 (179)
T 3qhb_A 78 TKLYSELEVKDSAETLEAKRLVS-TIES----QIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAA------EQG 146 (179)
T ss_dssp HHHSTTCCCCCCHHHHHHHHHHH-HHHH----THHHHHHSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH------HTT
T ss_pred HHHHhcccccccccccccccccc-cccc----cccccCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH------HCC
Confidence 888876432210 00000 0011 111111110 00 0 012333333322 123
Q ss_pred ccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 249 CYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 249 ~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
+--|=++|+.=+.+|-+|++-|..++..
T Consensus 147 ~~eiA~~F~~ia~~Ek~H~~ry~~ll~~ 174 (179)
T 3qhb_A 147 NMEVATAFEAIVKSETKHANWVKRALEN 174 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557899999999999999999988764
No 71
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=62.54 E-value=5.2 Score=32.27 Aligned_cols=65 Identities=17% Similarity=0.275 Sum_probs=35.1
Q ss_pred ccCCCCcccCchhHHHhhcC------------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhc
Q 014877 112 DYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~l 177 (416)
|.|..-.+--+||...+..+ .++....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|.+
T Consensus 109 D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~-~~~~~~~~~~~ 185 (190)
T 1g8i_A 109 DLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK-ADPSIVQALSL 185 (190)
T ss_dssp CTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH-HCHHHHHHHCC
T ss_pred cCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH-hChHHHHHHhh
Confidence 55555566666665544431 0111222233333444555577777777777664 56777776654
No 72
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=61.99 E-value=12 Score=29.17 Aligned_cols=94 Identities=16% Similarity=0.316 Sum_probs=57.8
Q ss_pred cHHHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cCcc
Q 014877 98 NQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPV 170 (416)
Q Consensus 98 ~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~------~NP~ 170 (416)
..++++.+.+-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+ +|.|-|.|...-+.. .-..
T Consensus 11 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~ 86 (153)
T 2ovk_B 11 SQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDA 86 (153)
T ss_dssp CHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTTH
T ss_pred CHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChHHH
Confidence 34455555555543 788888888888887776553222222233333333 999999987765543 2356
Q ss_pred HHHHhhccccchhhhhhhhhh-----hhccccc
Q 014877 171 VAEIFSLMSRDEARHAGFLNK-----GLSDFNY 198 (416)
Q Consensus 171 lae~F~lMaRDEARHAGFlNk-----al~Df~l 198 (416)
+.++|..+-+| +-|+|+. +|..+|.
T Consensus 87 l~~~F~~~D~d---~~G~I~~~el~~~l~~~g~ 116 (153)
T 2ovk_B 87 LRNAFSMFDED---GQGFIPEDYLKDLLENMGD 116 (153)
T ss_dssp HHHHHHTTCSS---CSSCCCHHHHHHHHHHSSS
T ss_pred HHHHHHHHCCC---CCCeEcHHHHHHHHHHcCC
Confidence 88999988766 5677664 4555554
No 73
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=61.39 E-value=15 Score=29.58 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=17.8
Q ss_pred hhccccchhhHHHHhhhhcccCccHHHHhhc
Q 014877 147 CTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (416)
Q Consensus 147 cTaEFSGflLYKEl~Rrlk~~NP~lae~F~l 177 (416)
+-..=+|.|-|.|+.+-++ ++|.+.++|..
T Consensus 156 ~D~d~dG~I~~~Ef~~~~~-~~~~~~~~l~~ 185 (190)
T 2l2e_A 156 MDKNKDGQLTLEEFCEGSK-RDPTIVSALSL 185 (190)
T ss_dssp HTCCSSCCBCHHHHHHHHH-TCTHHHHHHHT
T ss_pred hCCCCCCcCcHHHHHHHHH-hCcHHHHHHHH
Confidence 3444566677777666553 56666666553
No 74
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=60.97 E-value=2.9 Score=37.82 Aligned_cols=61 Identities=20% Similarity=0.259 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhhhccccc-hhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 135 LRQIFVEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 135 ~R~~FidFLerScTaEFSG-flLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
+..--.+-|+.+...|--- --.|.++.+.-+.. ++.++..|..++.+|.+|+.-..++|..
T Consensus 112 T~eN~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ry~~ll~~ 174 (179)
T 3qhb_A 112 DSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALEN 174 (179)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333444577777777653 35788888877766 8999999999999999999999888764
No 75
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=60.87 E-value=11 Score=32.76 Aligned_cols=122 Identities=16% Similarity=0.131 Sum_probs=98.3
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++-|-+-...|+....+|--+++-.++. -|-+++.|.-.|-+|..||--|=+-+.+.|-.++++-+.+- .-.|-.
T Consensus 18 ~~~~~~LN~~i~~El~a~~~Yl~~a~~~~~~gl~~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p-~~~~~~ 96 (181)
T 3bvf_A 18 KDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAP-EHKFEG 96 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC-CCCCCC
Confidence 4578888889999999999999888877554 58999999999999999999999999999999998887766 345557
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQD 262 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqD 262 (416)
+.=++=+..=-||.---.|-.+...-++.-+ +.+..+|+..-.|
T Consensus 97 ~~e~le~aL~~E~~~~~~~~~l~~~A~~~~D---~~t~~~l~~~l~e 140 (181)
T 3bvf_A 97 LTQIFQKAYEHEQHISESINNIVDHAIKSKD---HATFNFLQWYVAE 140 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HhHHHHHHHHHHH
Confidence 7778888888898888888888888777644 4555666655655
No 76
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=60.74 E-value=14 Score=30.46 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=37.2
Q ss_pred ccCCCCcccCchhHHHhhcCC--------h---------HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHH
Q 014877 112 DYNQTHFVRNKEFKEAADKMQ--------G---------PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEI 174 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~--------~---------e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~ 174 (416)
|.|..-.+--+||...+..+. + .....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++
T Consensus 105 D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~-~~~~~~~~ 183 (204)
T 1jba_A 105 DKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR-RDKWVMKM 183 (204)
T ss_dssp CSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT-TTTTHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-cChHHHHH
Confidence 556666666667755444330 0 02223333344444555578888888887775 67887777
Q ss_pred hh
Q 014877 175 FS 176 (416)
Q Consensus 175 F~ 176 (416)
+.
T Consensus 184 ~~ 185 (204)
T 1jba_A 184 LQ 185 (204)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 77
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=58.69 E-value=17 Score=31.06 Aligned_cols=64 Identities=9% Similarity=0.258 Sum_probs=33.6
Q ss_pred ccCCCCcccCchhHHHhh---------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhh
Q 014877 112 DYNQTHFVRNKEFKEAAD---------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d---------~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~ 176 (416)
|.|..=++--+||...+. .++++.-+..++-+.+.+-..=.|.|-|.|..+-++ ++|.+.++|.
T Consensus 139 D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~-~~p~~~~~l~ 211 (214)
T 2l4h_A 139 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSFK 211 (214)
T ss_dssp CTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH-TCHHHHHHTS
T ss_pred CCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-hChHHHHhcc
Confidence 445555555556644332 344444333344444444445566677777666554 5666666554
No 78
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=56.75 E-value=23 Score=29.10 Aligned_cols=75 Identities=17% Similarity=0.238 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccH
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVV 171 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~l 171 (416)
+++..+...+ |.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ ++|.+
T Consensus 111 ~~l~~~F~~~--D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~ 187 (207)
T 2ehb_A 111 EKVKFAFKLY--DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS-LNPSL 187 (207)
T ss_dssp HHHHHHHHHH--CTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HCGGG
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHH
Confidence 3344444333 455555566666655442 344444333333333445555567777777776664 46666
Q ss_pred HHHhhc
Q 014877 172 AEIFSL 177 (416)
Q Consensus 172 ae~F~l 177 (416)
.+.+..
T Consensus 188 ~~~~~~ 193 (207)
T 2ehb_A 188 IKNMTL 193 (207)
T ss_dssp GGGGCC
T ss_pred HHHhcc
Confidence 655544
No 79
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=56.73 E-value=8.8 Score=29.97 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=28.0
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~ 166 (416)
|.|+.-++--+||...+..+-...-..=++-+.+.+-.. +|.|-|.|..+-++.
T Consensus 97 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 97 DEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp CTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred CcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 555555566666655554432222222234444445455 677777776665543
No 80
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=55.95 E-value=12 Score=29.99 Aligned_cols=65 Identities=11% Similarity=0.229 Sum_probs=36.0
Q ss_pred ccCCCCcccCchhHHHhhcC------------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhc
Q 014877 112 DYNQTHFVRNKEFKEAADKM------------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l------------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~l 177 (416)
|.|..-.+--+||...+..+ +++.-..-++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.|+.
T Consensus 102 D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~-~~~~~~~~l~~ 178 (183)
T 1s6c_A 102 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ-EDDNIMRSLQL 178 (183)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT-SCCHHHHHHHH
T ss_pred CCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHh-cChHHHHHHHH
Confidence 55555566666775554332 1111112333344444555678888888877664 57777777765
No 81
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=55.26 E-value=4.2 Score=35.98 Aligned_cols=62 Identities=15% Similarity=0.035 Sum_probs=44.5
Q ss_pred HHHHHhhhhccccc-hhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccc
Q 014877 140 VEFLERSCTAEFSG-FLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALD 201 (416)
Q Consensus 140 idFLerScTaEFSG-flLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lD 201 (416)
.+=|+.+.-.|--. --.|+++.+.-+.. ++.++.+|..++.||.+|+..+.++|....-+-|
T Consensus 69 ~enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~~~~~~~l~~l~~~~~ 132 (170)
T 3pwf_A 69 PENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAKEKAEKGED 132 (170)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 34444455555433 34676666655543 8999999999999999999999999987754444
No 82
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=52.48 E-value=29 Score=29.46 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=32.2
Q ss_pred ccCCCCcccCchhHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhc
Q 014877 112 DYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSL 177 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d--------~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~l 177 (416)
|.|..-++--+||...+. .++++.-+..++-+-+.+-..=+|.|-|.|..+-++ ++|.+.+.+..
T Consensus 132 D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~~~ 204 (226)
T 2zfd_A 132 DLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL-RHPSLLKNMTL 204 (226)
T ss_dssp CTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH-HSGGGGGGGCC
T ss_pred CCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-hChHHHHHhch
Confidence 455555555556654442 233333233333222344445566677777666553 45665555543
No 83
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=52.47 E-value=15 Score=29.57 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
+++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-++
T Consensus 64 ~~~~~f~~~--D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~ 126 (190)
T 2l2e_A 64 FAEYVFNVF--DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126 (190)
T ss_dssp HHHHHHHHH--CSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHH
T ss_pred HHHHHHHHh--cCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHH
Confidence 344444433 555555566667766655542211111222223444556678888888776553
No 84
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=51.97 E-value=12 Score=32.61 Aligned_cols=82 Identities=10% Similarity=0.070 Sum_probs=40.0
Q ss_pred ChHHHhhccccccCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHH
Q 014877 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKEL 160 (416)
Q Consensus 81 DFd~m~~lf~~eid~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl 160 (416)
+++++.+++..-.......++++.++..+ |.|..-.+--+||...+..+.......=+..+-+-+-..=+|.|-+.|+
T Consensus 110 ~~~ef~~~l~~~~~~~~~~~~~~~~f~~~--D~d~dG~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef 187 (256)
T 2jul_A 110 DEDTFKLIYSQFFPQGDATTYAHFLFNAF--DADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187 (256)
T ss_dssp EHHHHHHHHHHHCCSSCCHHHHHHHHHHS--SCSCCSEECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHH
T ss_pred CHHHHHHHHHHHcccCCcHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 44554444322112334556666666655 4555555666667555443311111222223334455556666666666
Q ss_pred hhhh
Q 014877 161 GRRL 164 (416)
Q Consensus 161 ~Rrl 164 (416)
..=+
T Consensus 188 ~~~l 191 (256)
T 2jul_A 188 LAIM 191 (256)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 85
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=51.41 E-value=11 Score=27.96 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=45.3
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc---c-----cCccHHHHhhccccc
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK---K-----TNPVVAEIFSLMSRD 181 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk---~-----~NP~lae~F~lMaRD 181 (416)
|.|+.-.+--+||...+..+.......-++-+-+.+-..=+|.|-|.|+..-++ . ....+.++|..+-+|
T Consensus 10 D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d 87 (134)
T 1jfj_A 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVD 87 (134)
T ss_dssp CTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCC
Confidence 555666666667766666554444455566677777778889999999887663 1 122466677666554
No 86
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=50.49 E-value=22 Score=27.52 Aligned_cols=87 Identities=10% Similarity=0.105 Sum_probs=51.0
Q ss_pred HHHHHHHHHh-hc-cCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc----------ccC
Q 014877 101 EFEALLQEFK-TD-YNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK----------KTN 168 (416)
Q Consensus 101 E~~Aml~Efr-~D-yNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk----------~~N 168 (416)
++..+.+-|+ -| .|+.-.+--+||...+..+.......-++-|.+.+-..=+|.|-|.|...-+. ...
T Consensus 11 ~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 90 (158)
T 2jnf_A 11 QVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ 90 (158)
T ss_dssp HHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTS
T ss_pred HHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHH
Confidence 4444444443 26 66666677777766655443222233455555666666678888887665543 234
Q ss_pred ccHHHHhhccccchhhhhhhhh
Q 014877 169 PVVAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlN 190 (416)
..+.++|..+-+| +-|+|.
T Consensus 91 ~~~~~~F~~~D~d---~~G~I~ 109 (158)
T 2jnf_A 91 QELREAFRLYDKE---GNGYIS 109 (158)
T ss_dssp STHHHHHHHHCSS---SSSSEE
T ss_pred HHHHHHHHHhCCC---CCCeEc
Confidence 5688899877655 445544
No 87
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=49.45 E-value=15 Score=29.80 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccc
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMa 179 (416)
+++..+...| |.|+.-++--+||...+..+-...-..-++-+.+.+-..=+|.|-|.|...-++...+.+.++|..+-
T Consensus 50 ~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~D 127 (150)
T 2jjz_A 50 TAFKEKYMEF--DLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFE 127 (150)
T ss_dssp HHHHHHHTTS--CCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC--
T ss_pred HHHHHHHHHh--CCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444333 77888888888887776655222112223444455555668999999998888777888999999877
Q ss_pred cc
Q 014877 180 RD 181 (416)
Q Consensus 180 RD 181 (416)
.|
T Consensus 128 ~d 129 (150)
T 2jjz_A 128 GK 129 (150)
T ss_dssp --
T ss_pred CC
Confidence 65
No 88
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=48.68 E-value=34 Score=28.15 Aligned_cols=65 Identities=23% Similarity=0.212 Sum_probs=40.5
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~ 166 (416)
......++++.++..+ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++.
T Consensus 57 ~~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~e~~~~l~~ 121 (191)
T 1y1x_A 57 GVPFSLATTEKLLHMY--DKNHSGEITFDEFKDLHHFI-LSMREGFRKR-----DSSGDGRLDSNEVRAALLS 121 (191)
T ss_dssp TBCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHHHHH-HHHHHHHHHH-----CTTSSSCBCHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCeEcHHHHHHHHHH
Confidence 3445567777777766 55555556666776655543 3455555433 4566788888888776653
No 89
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=48.47 E-value=11 Score=36.67 Aligned_cols=185 Identities=13% Similarity=0.098 Sum_probs=96.5
Q ss_pred HHHhhcCChHHHH-----HHHHHHHhhhhccccchhhHHHHhhhhcccC-cc-----HHHH-hhccccchhhhhhhhhhh
Q 014877 125 KEAADKMQGPLRQ-----IFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PV-----VAEI-FSLMSRDEARHAGFLNKG 192 (416)
Q Consensus 125 ~~~~d~l~~e~R~-----~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~-----lae~-F~lMaRDEARHAGFlNka 192 (416)
...|+.|++|.|. +++.|+..-.-.| ++|-.-+.|.|-+.. |. +... .+.|. ||+||+=+-=++
T Consensus 71 tp~w~~l~~eqR~~L~~~e~~~~~s~~I~~E---~~lv~~~~r~i~~~~~p~~~~~~~~ya~ltei~-DE~~Hs~Mf~~~ 146 (336)
T 3chh_A 71 HPLFLAAEPHQRQRVLTGMWIGYNERVIATE---QLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIV-DESFHTYMHMLA 146 (336)
T ss_dssp CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH---HHTHHHHHHHHHTTCSTTTTCHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CHhHHhCCHHHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 5789999999875 4566665544433 223333344333332 22 2122 33444 999998665555
Q ss_pred hc----cccccccccc----ccc--cCccccccch----hhhhhh-hcccccchhhHHHHHHHhhhCCCCcccchhhhhH
Q 014877 193 LS----DFNYALDLGF----LTK--ARKYTFFKPK----FIFYAT-YLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFE 257 (416)
Q Consensus 193 l~----Df~l~lDLgf----Ltk--~rkYTfF~Pk----fIfYAt-YLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE 257 (416)
+. -.|+.=++.. |.+ .+.--.-++. -+.|+. -++|-|--+ .-|.+-+. -++-|+.+=.-
T Consensus 147 ~~~~~~~~G~~~~~~~p~~~l~r~l~~~la~~~~~~~~~l~~~a~~lvaEeiid~----~~r~~~~D--~~vQP~vR~v~ 220 (336)
T 3chh_A 147 IDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCINA----LLALLARD--ATIQPMHSLIT 220 (336)
T ss_dssp HHHHHHHTTCCCCCCCCCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSBCH----HHHHHHTC--SSSCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCChHHHHHHHHHHHccCchhhhhHHHHHHHHHHHHHHHHH----HHHHhcCC--CCCChHHHHHH
Confidence 55 4775411100 000 0000000110 112333 556655432 12344444 45889988775
Q ss_pred hhh-hhcccchhHHHHHHhhCccchhhhhhHHHHHHHHHHHHHhhhhh-hcc-chhHHhhcCCChhh
Q 014877 258 NWC-QDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLN-DCQ-RTAFYEGIGLDTKE 321 (416)
Q Consensus 258 ~WC-qDEnRHGDfFaalmraqP~ll~g~~~kLW~RFFLLsVfaTMyl~-D~~-R~~Fy~alGld~~~ 321 (416)
.=+ .||.||.-||.-+++..=+-++.+ .|-..+ -++.+++.+|+. |.. .+.=|+.+|||+.+
T Consensus 221 riHv~DEaRH~~fare~~~~~~~~l~~~-~R~~~~-~~l~~~l~af~~~~~~~~~~vy~~aGl~~~~ 285 (336)
T 3chh_A 221 TLHLRDETAHGSIVVEVVRELYARMNEQ-QRRALV-RCLPIALEAFAEQDLSALLLELNAAGIRGAE 285 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHH-HHHHHH-HHHHHHHHHHHCCCTHHHHHHHHHHTCTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHH-HHHHHHHHHHHHhHhhcCHHHHHHCCCCcHH
Confidence 555 899999999998877633333322 233333 233444344443 333 77889999999873
No 90
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=47.07 E-value=21 Score=28.26 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=44.2
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNk 191 (416)
|.|+.-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+.. .+.+.++|..+-+| +-|+|..
T Consensus 80 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~-~~~~~~~F~~~D~d---~~G~i~~ 153 (165)
T 1k94_A 80 DQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK-LRALTDFFRKRDHL---QQGSANF 153 (165)
T ss_dssp CTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH-HHHHHHHHHTTCTT---CCSEEEE
T ss_pred CCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH-HHHHHHHHHHhCCC---CCCeEee
Confidence 777777888888877665442111111122222222 45788888888776642 36788888887654 4566543
No 91
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=46.91 E-value=35 Score=25.76 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChH-HHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-------cc
Q 014877 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-------PV 170 (416)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e-~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-------P~ 170 (416)
++||..+...+ |.|+.-.+--+||...+..+... ...+....+.. .=+|.|-|.|...-+.... ..
T Consensus 4 ~~el~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 77 (145)
T 2bl0_B 4 ADQIQECFQIF--DKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ----LNAKEFDLATFKTVYRKPIKTPTEQSKE 77 (145)
T ss_dssp HHHHHHHHHHH--CTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH----HTSSEECHHHHHHHHTSCCCCGGGGHHH
T ss_pred HHHHHHHHHHh--CCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh----cCCCeEcHHHHHHHHHHHhhcCcccHHH
Confidence 45566666655 66777778778887665544211 12222222222 5678888888776664332 46
Q ss_pred HHHHhhccccchhhhhhhhh
Q 014877 171 VAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (416)
+.++|..+-+| +-|+|+
T Consensus 78 l~~~F~~~D~d---~~G~i~ 94 (145)
T 2bl0_B 78 MLDAFRALDKE---GNGTIQ 94 (145)
T ss_dssp HHHHHHHHCSS---SSSEEE
T ss_pred HHHHHHHhCCC---CCCeEc
Confidence 77888776554 345544
No 92
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=46.47 E-value=19 Score=27.77 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=51.1
Q ss_pred cHHHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------Ccc
Q 014877 98 NQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPV 170 (416)
Q Consensus 98 ~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~------NP~ 170 (416)
..++.+.+.+-|+. |.|+.-++--+||......+....-..-++-+.+.+-..=+|.|-|.|...-+... -..
T Consensus 18 ~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~ 97 (161)
T 3fwb_A 18 LEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDE 97 (161)
T ss_dssp CHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHH
Confidence 33444455554443 77777777777776665554322223335555566666667777777765444221 245
Q ss_pred HHHHhhccccchhhhhhhhh
Q 014877 171 VAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (416)
+.++|..+-+| +-|+|+
T Consensus 98 ~~~~F~~~D~d---~~G~i~ 114 (161)
T 3fwb_A 98 IKRAFQLFDDD---HTGKIS 114 (161)
T ss_dssp HHHHHHHHCTT---CSSEEC
T ss_pred HHHHHHHHcCC---CCCeEe
Confidence 67778776554 345554
No 93
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=46.10 E-value=20 Score=27.33 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
++++..+...+ |.|+.-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|..+-++
T Consensus 75 ~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 75 EDVIRNAFACF--DEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp HHHHHHHHTTS--CSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 34444444433 666667777777777665553333233344455555555577777777766664
No 94
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=45.93 E-value=21 Score=28.82 Aligned_cols=64 Identities=9% Similarity=0.230 Sum_probs=34.0
Q ss_pred ccCCCCcccCchhHHHhhcC---------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhh
Q 014877 112 DYNQTHFVRNKEFKEAADKM---------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFS 176 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l---------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~ 176 (416)
|.|..-++--+||...+..+ +++.-+..++-+.+.+-..=+|.|-|.|..+-++ ++|.+.++|.
T Consensus 108 D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~-~~~~~~~~~~ 180 (183)
T 1dgu_A 108 DFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS-RSPDFASSFK 180 (183)
T ss_dssp CTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHC-SSCHHHHCCC
T ss_pred CCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-hChHHHHhcC
Confidence 55555566666665544332 2222222233344455555567777777777664 4666665543
No 95
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=45.56 E-value=35 Score=28.01 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhh-ccC--CCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------cc
Q 014877 100 AEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PV 170 (416)
Q Consensus 100 ~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N------P~ 170 (416)
+|++.+.+-|+. |.| +.-.+--+||...+.. .+.....+++-+-+.+-..=+|.|-|.|...-+.... ..
T Consensus 34 ~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~ 112 (207)
T 2ehb_A 34 EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEK 112 (207)
T ss_dssp HHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHH
T ss_pred HHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHH
Confidence 445555555543 555 7777777778766543 2222223344444555666788899988877665332 23
Q ss_pred HHHHhhccccc
Q 014877 171 VAEIFSLMSRD 181 (416)
Q Consensus 171 lae~F~lMaRD 181 (416)
+.++|..+-+|
T Consensus 113 l~~~F~~~D~d 123 (207)
T 2ehb_A 113 VKFAFKLYDLR 123 (207)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 77778766554
No 96
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=45.53 E-value=44 Score=25.23 Aligned_cols=72 Identities=17% Similarity=0.056 Sum_probs=42.0
Q ss_pred CccccHHHHHHHHHHHhh-ccCCCCcccCchhHHHhhcC---ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 014877 94 NKKLNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l---~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~ 166 (416)
...+..++++.++..+.. |.|. -.+-=+||...+... .+.....-+.-+-+.+-..=+|.|-..|+.+=++.
T Consensus 38 ~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 113 (149)
T 2mys_C 38 GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLAT 113 (149)
T ss_pred CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHH
Confidence 555667788888888733 6666 566667776655543 11111111222223445566888888888776643
No 97
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=45.42 E-value=27 Score=27.24 Aligned_cols=70 Identities=20% Similarity=0.185 Sum_probs=35.1
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
...+..++++.++..+ |.|..-.+--+||...+..+....+..-+..+=+.+-..=+|.|-..|+.+-++
T Consensus 57 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~ 126 (166)
T 2aao_A 57 GANLKESEILDLMQAA--DVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE 126 (166)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4445556666666665 444444455556655554432211112222222333455567777777766554
No 98
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=45.10 E-value=28 Score=29.98 Aligned_cols=135 Identities=13% Similarity=0.047 Sum_probs=109.4
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhcccC---ccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKTN---PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~N---P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF 214 (416)
..++-|-+=...|+...-.|--+++-....+ |-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+-..-.|=
T Consensus 11 ~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~~ 90 (174)
T 2v2p_A 11 EVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQDEWG 90 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccccC
Confidence 4677778888999999999999999887644 9999999999999999999998999999999999998775233444
Q ss_pred cchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhh-hhhcccchhHHHHHHh
Q 014877 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENW-CQDENRHGDFFSALMK 275 (416)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~W-CqDEnRHGDfFaalmr 275 (416)
.+.=++=+++=-||.--.+|-.++..-+++-++. ...|++.| -.+|-.|-+-+.-++.
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~---t~~fLe~~~l~eq~e~~~~l~~~l~ 149 (174)
T 2v2p_A 91 TTPDAMKAAIVLEKSLNQALLDLHALGSAQADPH---LCDFLESHFLDEEVKLIKKMGDHLT 149 (174)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888999999999999999999998875544 45666663 5667777776665554
No 99
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=44.75 E-value=31 Score=27.73 Aligned_cols=63 Identities=19% Similarity=0.269 Sum_probs=33.2
Q ss_pred ccCCCCcccCchhHHHhhc----------CChH--HHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHh
Q 014877 112 DYNQTHFVRNKEFKEAADK----------MQGP--LRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIF 175 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~----------l~~e--~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F 175 (416)
|.|..-++--+||...+.. ++.+ ....-++-+-+.+-..=+|.|-|.|+.+-++ ++|.+.++|
T Consensus 109 D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~-~~~~~~~~~ 183 (193)
T 1bjf_A 109 DLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK-SDPSIVRLL 183 (193)
T ss_dssp CTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHH-HCTHHHHTT
T ss_pred CCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHh-cCHHHHHHh
Confidence 5555556666666544422 2221 1222233333444555567777777776664 566666666
No 100
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=44.54 E-value=30 Score=29.82 Aligned_cols=136 Identities=12% Similarity=0.048 Sum_probs=110.3
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc---CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~---NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTf 213 (416)
+..++-|-+=.+.|+...-.|--+++-.... -|-+++.|.-.|.+|-.||--|=+-+.+.|-.++|+-+.+-..-.|
T Consensus 11 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~ 90 (173)
T 1rcd_A 11 QDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDDW 90 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcccc
Confidence 3467778888899999999999999888652 4999999999999999999999899999999999999887634444
Q ss_pred ccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhh-hhcccchhHHHHHHh
Q 014877 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWC-QDENRHGDFFSALMK 275 (416)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WC-qDEnRHGDfFaalmr 275 (416)
=.|.=++=+.+=-||.--.+|-.++..-+++-|+ ...+|+|+|. .++-.|-+-+.-++.
T Consensus 91 ~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~---~t~~fLe~~~l~eq~e~~~~l~~~l~ 150 (173)
T 1rcd_A 91 ANGLEALQTALKLQKSVNQALLDLHAVAADKSDP---HMTDFLESPYLSESVETIKKLGDHIT 150 (173)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888899999999999999999999987554 4557777564 566777776665543
No 101
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=44.11 E-value=8.7 Score=31.90 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=46.5
Q ss_pred HHHHHHhhhhccccc-hhhHHHHhhhhcc-cCccHHHHhhccccchhhhhhhhhhhhccc
Q 014877 139 FVEFLERSCTAEFSG-FLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDF 196 (416)
Q Consensus 139 FidFLerScTaEFSG-flLYKEl~Rrlk~-~NP~lae~F~lMaRDEARHAGFlNkal~Df 196 (416)
-.|-|+.+.-.|-.- --.|+++.+.-++ ..+.++++|..++.||.+|+..+.+.|...
T Consensus 81 ~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~~~~~~l~~i 140 (144)
T 1j30_A 81 LEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQL 140 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777778777 4788877776543 489999999999999999999999988753
No 102
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=43.32 E-value=18 Score=28.41 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=35.8
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cCccHHHHhhccccchhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARH 185 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~------~NP~lae~F~lMaRDEARH 185 (416)
|.|+.-.+--+||......+....-..-++-+.+.+-..=+|.|-|.|...-+.. ....+.++|..+-+| +
T Consensus 38 D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d---~ 114 (169)
T 3qrx_A 38 DTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDD---N 114 (169)
T ss_dssp CTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---C
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCC---C
Confidence 5555555555566554444322222223333344444444566666655444321 123456667665444 3
Q ss_pred hhhhh
Q 014877 186 AGFLN 190 (416)
Q Consensus 186 AGFlN 190 (416)
-|+|+
T Consensus 115 ~G~i~ 119 (169)
T 3qrx_A 115 SGTIT 119 (169)
T ss_dssp SSSBC
T ss_pred CCcCC
Confidence 45544
No 103
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=42.62 E-value=17 Score=27.54 Aligned_cols=88 Identities=11% Similarity=0.227 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----------C
Q 014877 100 AEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT----------N 168 (416)
Q Consensus 100 ~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~----------N 168 (416)
++.+.+.+-|+. |.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+... -
T Consensus 8 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 87 (153)
T 3ox6_A 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGV 87 (153)
T ss_dssp HHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccH
Confidence 344444444432 56666677777887666654322223334445555666668888888876544211 1
Q ss_pred ccHHHHhhccccchhhhhhhhh
Q 014877 169 PVVAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlN 190 (416)
..+.++|..+-+| +-|+|+
T Consensus 88 ~~~~~~F~~~D~d---~~G~i~ 106 (153)
T 3ox6_A 88 KELRDAFREFDTN---GDGEIS 106 (153)
T ss_dssp HHHHHHHHHHCTT---CSSSBC
T ss_pred HHHHHHHHHhCCC---CCCcCc
Confidence 3467788766554 345543
No 104
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=41.76 E-value=33 Score=29.44 Aligned_cols=61 Identities=21% Similarity=0.160 Sum_probs=26.3
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrl 164 (416)
....++++.+++++ |.|..-.+-=+||...+..+ .+.+..|-.| -..=+|.|-..|+.+=+
T Consensus 83 ~~~~~~~~~l~~~~--D~d~dg~I~~~EF~~~~~~~-~~l~~~F~~~-----D~d~~G~I~~~El~~~l 143 (220)
T 3sjs_A 83 RLSPQTALRMMRIF--DTDFNGHISFYEFMAMYKFM-ELAYNLFVMN-----ARARSGTLEPHEILPAL 143 (220)
T ss_dssp CCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CCSSTTEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHH-----CCCCCCCCcHHHHHHHH
Confidence 34444555555554 33333334444454443332 3333333322 33345555555554433
No 105
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=41.45 E-value=20 Score=27.76 Aligned_cols=16 Identities=25% Similarity=0.393 Sum_probs=8.3
Q ss_pred CccccHHHHHHHHHHH
Q 014877 94 NKKLNQAEFEALLQEF 109 (416)
Q Consensus 94 d~s~~r~E~~Aml~Ef 109 (416)
...+..++++.|+.++
T Consensus 46 g~~~~~~~~~~~~~~~ 61 (153)
T 2ovk_B 46 GRVPPDDELNAMLKEC 61 (153)
T ss_dssp TSCCCHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHc
Confidence 3444555555555554
No 106
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=41.40 E-value=16 Score=28.60 Aligned_cols=87 Identities=16% Similarity=0.151 Sum_probs=53.5
Q ss_pred cCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 014877 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (416)
Q Consensus 93 id~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~---- 167 (416)
+.+.+..++++.++.++ |.|..-.+-=+||...+... .......-+.-+-+.+-..=+|.|-..|+.+=++.-
T Consensus 57 ~~~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~ 134 (169)
T 3qrx_A 57 LGFEPKKEEIKKMISEI--DKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENL 134 (169)
T ss_dssp TSCCCCHHHHHHHHHHH--CSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCC
T ss_pred cCCCCCHHHHHHHHHHh--cCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCC
Confidence 46667778888888887 56666667777886555432 111112222223344456678888888888766533
Q ss_pred -CccHHHHhhccccc
Q 014877 168 -NPVVAEIFSLMSRD 181 (416)
Q Consensus 168 -NP~lae~F~lMaRD 181 (416)
..++.++|..+-.|
T Consensus 135 ~~~~~~~~~~~~D~~ 149 (169)
T 3qrx_A 135 TEEELQEMIAEADRN 149 (169)
T ss_dssp CHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHhCCC
Confidence 24577777776554
No 107
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=40.25 E-value=46 Score=27.14 Aligned_cols=88 Identities=19% Similarity=0.447 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCCh-HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCc--cHHHH
Q 014877 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQG-PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNP--VVAEI 174 (416)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~-e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP--~lae~ 174 (416)
++|++.+-+-|+. |-|..-.+--+|+...+..|.. .+..++..++ ..+....+.--....+.+.++..++ .|.+.
T Consensus 12 ~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~-~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~a 90 (153)
T 3i5g_B 12 QRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML-KECPGQLNFTAFLTLFGEKVSGTDPEDALRNA 90 (153)
T ss_dssp HHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHH-HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHH-HhccCCccHHHHHHHHHhhhcccccHHHHHHH
Confidence 3344444444443 5666666666666555544321 1223333332 2333333332233344555544443 57888
Q ss_pred hhccccchhhhhhhhh
Q 014877 175 FSLMSRDEARHAGFLN 190 (416)
Q Consensus 175 F~lMaRDEARHAGFlN 190 (416)
|...-+| +-|+|.
T Consensus 91 F~~fD~d---~~G~I~ 103 (153)
T 3i5g_B 91 FSMFDED---GQGFIP 103 (153)
T ss_dssp HHTTCSS---CSSCCC
T ss_pred HhccccC---CCCeEe
Confidence 8776555 345544
No 108
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=40.24 E-value=34 Score=30.03 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=107.1
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhccccccccccc
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF 204 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf 204 (416)
++|--|++ ..++-|-+-...|+...-.|--+++-..+. -|-+++.|.-.|.+|-.||--|=+-+.+.|-.++|+-
T Consensus 6 ~~~~m~~~----~v~~~LN~qin~EL~as~~Yl~~a~~f~~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~ 81 (184)
T 3qz3_A 6 QEFFMLSQ----AMVEHLNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGA 81 (184)
T ss_dssp ---CCSCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred cCeeecCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCC
Confidence 45555554 466777777889999999999888877644 5889999999999999999999999999999999999
Q ss_pred ccccCccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHH
Q 014877 205 LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSAL 273 (416)
Q Consensus 205 Ltk~rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaal 273 (416)
+.+-+ -.|=.+.=++=+.+-.||.--..|-.++..-+++-|+.- .+|++..-+++-.|-+-+.-+
T Consensus 82 i~~p~-~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t---~~fLe~fl~EQve~~~~l~~~ 146 (184)
T 3qz3_A 82 IAAPR-HDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYST---FNFLQWYVAEQHEEEKLFKGI 146 (184)
T ss_dssp BCCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcc-cCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhH---HHHHHHHHHHHHHHHHHHHHH
Confidence 98876 345567778888888999999999999999888766554 455562334555665554443
No 109
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=40.06 E-value=37 Score=29.69 Aligned_cols=136 Identities=12% Similarity=0.030 Sum_probs=109.7
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc---CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 213 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~---NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTf 213 (416)
+..++-|-+=...|+...-+|=-+++-.... -|-+++.|.-.|-+|-.||--|=+-+.+.|-.+.|+-+.+-..-.|
T Consensus 15 ~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~ 94 (183)
T 2cih_A 15 QDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDCDDW 94 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCCcccc
Confidence 4567888888899999999999999988663 4899999999999999999999899999999999999887755445
Q ss_pred ccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhh-hhhcccchhHHHHHHh
Q 014877 214 FKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENW-CQDENRHGDFFSALMK 275 (416)
Q Consensus 214 F~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~W-CqDEnRHGDfFaalmr 275 (416)
=.|.=++=+.+=-||---.+|-.++..-+++-|+. ..+|++.| -.++-.|-+-+.-++.
T Consensus 95 ~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~---t~~fLe~~fl~eq~e~~~~l~~~l~ 154 (183)
T 2cih_A 95 ESGLNAMECALHLEKNVNQSLLELHKLATDKNDPH---LCDFIETHYLNEQVKAIKELGDHVT 154 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999988876554 45666654 4556667666665543
No 110
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=39.66 E-value=14 Score=35.44 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=65.0
Q ss_pred cchhhhhhhhhhhhcccccccccccc---cccCccccccchhh--------hhhhhcccccchhhHHHHHHHhhhCCCCc
Q 014877 180 RDEARHAGFLNKGLSDFNYALDLGFL---TKARKYTFFKPKFI--------FYATYLSEKIGYWRYITIYRHLKANPEFQ 248 (416)
Q Consensus 180 RDEARHAGFlNkal~Df~l~lDLgfL---tk~rkYTfF~PkfI--------fYAtYLSEKIGYwRYItIyRHLe~~Pe~r 248 (416)
..|-.|....-+.|.++|++-+..-+ .-.+.|+=+...++ +=+.+..|....|.|-.|-+.|++.+-
T Consensus 188 ~~e~~H~el~~~~l~~lGld~~~~~~~~~p~~~~~v~~~~~~~~~~~~~~alaal~~~E~~~p~~y~~i~~~l~~~g~-- 265 (332)
T 3bjd_A 188 DEKGSHPRLLAKLLEAIGLEADFQAVSTMPEEIAYLNNRARAFRHAEVGWGLAVFYITELVVPGNHEKLYRALLQAGL-- 265 (332)
T ss_dssp CGGGCHHHHHHHHHHHTTCCCCTTCCCCCHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CccccHHHHHHHHHHHcCCChhHhcccCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC--
Confidence 45667888888999999988774211 11222333333332 223477799999999999999998642
Q ss_pred ccc-hhhhhHhhhhhcccch-hHHHHHHhhCcc
Q 014877 249 CYP-IFKYFENWCQDENRHG-DFFSALMKAQPQ 279 (416)
Q Consensus 249 ~~P-IFk~FE~WCqDEnRHG-DfFaalmraqP~ 279 (416)
-| -..||..|..=..+|| ..+..+|..-|.
T Consensus 266 -~~~~~~yf~~HI~lD~~H~~~~~~~ll~~~~~ 297 (332)
T 3bjd_A 266 -SEDQAEYYKVHISLVPPRAKREWQLIARRIPD 297 (332)
T ss_dssp -CTTTTHHHHHHHHHCC---CTTHHHHHTTTTC
T ss_pred -CcccchHHHHHHHHhHHHHHHHHHHHHHhCCC
Confidence 22 4589999998888999 888888877663
No 111
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=38.97 E-value=56 Score=27.39 Aligned_cols=87 Identities=15% Similarity=0.246 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHH------HHHHHHHHhhhhccccchhhHHHHhhhhcc-------
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLR------QIFVEFLERSCTAEFSGFLLYKELGRRLKK------- 166 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R------~~FidFLerScTaEFSGflLYKEl~Rrlk~------- 166 (416)
+++..+...| |.|+.-.+--+||......+-...- +..++-|.+.+-..=+|.|-|.|...-+..
T Consensus 16 ~~l~~~F~~~--D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~ 93 (263)
T 2f33_A 16 SQFFEIWLHF--DADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLL 93 (263)
T ss_dssp HHHHHHHHHH--CTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHH
T ss_pred HHHHHHHHHh--CCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHH
Confidence 4555555554 5555566666666555443311111 023333444455556777777777655422
Q ss_pred -------cCccHHHHhhccccchhhhhhhhhh
Q 014877 167 -------TNPVVAEIFSLMSRDEARHAGFLNK 191 (416)
Q Consensus 167 -------~NP~lae~F~lMaRDEARHAGFlNk 191 (416)
....+.++|..+-+| +-|.|+.
T Consensus 94 ~~~~~~~~~~~l~~~F~~~D~d---~~G~i~~ 122 (263)
T 2f33_A 94 FRCQQLKSCEEFMKTWRKYDTD---HSGFIET 122 (263)
T ss_dssp HGGGTSSCHHHHHHHHTTSSTT---TCSSBCH
T ss_pred HHHhhccHHHHHHHHHHHHCCC---CCCCcCH
Confidence 234677888877665 5666553
No 112
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=38.64 E-value=46 Score=28.04 Aligned_cols=88 Identities=20% Similarity=0.338 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHHhhccCCCCcccCchhHHHhh----------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh---
Q 014877 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD----------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL--- 164 (416)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d----------~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrl--- 164 (416)
..+++..+...| |-|+.-.+--+||..... .++++.-+.+++-+.+.+-..=+|.|-|.|...-+
T Consensus 9 ~~~~l~~~F~~~--D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~ 86 (272)
T 2be4_A 9 DAAGFLQIWQHF--DADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQ 86 (272)
T ss_dssp CHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCH
T ss_pred CHHHHHHHHHHh--cCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhh
Confidence 345677777776 677777888888876655 44555444444444455566667888888876652
Q ss_pred -------------cccCccHHHHhhccccchhhhhhhhh
Q 014877 165 -------------KKTNPVVAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 165 -------------k~~NP~lae~F~lMaRDEARHAGFlN 190 (416)
......+.++|..+-+| +-|.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~i~ 122 (272)
T 2be4_A 87 EENFLLIFRREAPLDNSVEFMKIWRKYDAD---SSGYIS 122 (272)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHCTT---CCSEEE
T ss_pred hHHHHHHHhhccCcccHHHHHHHHHHhCCC---CCCccC
Confidence 12234567777776554 345554
No 113
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=36.95 E-value=21 Score=26.98 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=50.5
Q ss_pred cCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC---
Q 014877 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN--- 168 (416)
Q Consensus 93 id~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N--- 168 (416)
+...+..++++.++..+ |.|..-.+-=+||...+..+ .......-+.-+-+.+-..=+|.|-..|+.+-++.-+
T Consensus 40 ~~~~~~~~~~~~l~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~ 117 (147)
T 4ds7_A 40 LGLSPSEAEVADLMNEI--DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL 117 (147)
T ss_dssp TTCCCCHHHHHHHHHHH--CTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC
T ss_pred hCCCCCHHHHHHHHHHh--ccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCC
Confidence 35566777888888877 55666667677776554332 1111122222223444566688888888887765332
Q ss_pred --ccHHHHhhccc
Q 014877 169 --PVVAEIFSLMS 179 (416)
Q Consensus 169 --P~lae~F~lMa 179 (416)
..+.++|..+.
T Consensus 118 ~~~~~~~~~~~~d 130 (147)
T 4ds7_A 118 TDAEVDEMLREVS 130 (147)
T ss_dssp CHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHhc
Confidence 45666777664
No 114
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=36.94 E-value=6.2 Score=34.57 Aligned_cols=22 Identities=32% Similarity=0.780 Sum_probs=19.6
Q ss_pred cchhhHHHHHHHhhhCCCCccc
Q 014877 229 IGYWRYITIYRHLKANPEFQCY 250 (416)
Q Consensus 229 IGYwRYItIyRHLe~~Pe~r~~ 250 (416)
|-|.||++++-.|-+|||++=.
T Consensus 63 ilymRy~~L~~kIpkHpdyk~~ 84 (144)
T 2a9u_A 63 VLYMKYVTVYNLIKKRPDFKQQ 84 (144)
T ss_dssp HHHHHHHHHHHHHTTSHHHHHT
T ss_pred HHHHHHHHHHHHHhcCcchhhh
Confidence 7899999999999999998653
No 115
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=36.54 E-value=23 Score=30.44 Aligned_cols=129 Identities=13% Similarity=0.098 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhcc
Q 014877 100 AEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLM 178 (416)
Q Consensus 100 ~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lM 178 (416)
+|++.+.+-|+. |.|+.-.+--+||......+....-..-++-|.+.+-..=+|.|-|.|...-+.. -..+.++|..+
T Consensus 48 ~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~-~~~l~~~F~~~ 126 (220)
T 3sjs_A 48 DQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKF-MELAYNLFVMN 126 (220)
T ss_dssp HHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-HHHHHHHHHHH
Confidence 344444444433 7777778888888776555432233334455555556666899988888775542 26688899887
Q ss_pred ccchhhhhhhhh-----hhhcccccccccccccccCccccccchhhhhhhhcccccchhhHHHHHHHhh
Q 014877 179 SRDEARHAGFLN-----KGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK 242 (416)
Q Consensus 179 aRDEARHAGFlN-----kal~Df~l~lDLgfLtk~rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe 242 (416)
-+| +-|+|+ ++|+..|..++-.-+. ..+=...==..+|.|--|+.+...+.
T Consensus 127 D~d---~~G~I~~~El~~~l~~~g~~~~~~~~~----------~l~~~~dd~dg~I~~~eF~~~~~~l~ 182 (220)
T 3sjs_A 127 ARA---RSGTLEPHEILPALQQLGFYINQRTSL----------LLHRLFARGMAFCDLNCWIAICAFAA 182 (220)
T ss_dssp CCS---STTEECHHHHHHHHHHHTCCCCHHHHH----------HHHHHHC--CCSEEHHHHHHHHHHHH
T ss_pred CCC---CCCCCcHHHHHHHHHHhCCCCCHHHHH----------HHHHHhcCCCCcCcHHHHHHHHHHHH
Confidence 665 456665 3566666544322111 01111111123577777777666654
No 116
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=36.40 E-value=31 Score=27.45 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=44.0
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNk 191 (416)
|.|..-.+--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..+.+.++|..+-+| +-|.|+.
T Consensus 82 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 155 (167)
T 1gjy_A 82 DSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCV-KLRALTDSFRRRDSA---QQGMVNF 155 (167)
T ss_dssp CTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHH-HHHHHHHHHHHHCTT---CCSEEEE
T ss_pred CCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCeeEEe
Confidence 777777777788877665542211111122222223 4578888888877664 336778888877655 4566654
Q ss_pred h
Q 014877 192 G 192 (416)
Q Consensus 192 a 192 (416)
.
T Consensus 156 ~ 156 (167)
T 1gjy_A 156 S 156 (167)
T ss_dssp E
T ss_pred e
Confidence 3
No 117
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=36.21 E-value=32 Score=33.22 Aligned_cols=213 Identities=14% Similarity=0.133 Sum_probs=92.2
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhccccc------
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNY------ 198 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaE-FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~l------ 198 (416)
++|.+|+++.|..+.-=|--=..++ .-|-.+-..+.+-+ ++|++.-++...+=.|+.|+-.-..-+.-++.
T Consensus 69 ~dw~~Lt~~Er~~~~~~l~~~~~~D~iv~~nl~~~l~~~v--~~~E~~~~~~~q~~~E~iHs~sYs~il~tl~~~~~e~~ 146 (345)
T 1jk0_B 69 EDFQKLTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQL--QNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIP 146 (345)
T ss_dssp TTTTTSCTTHHHHHHHHHHHHC---------CHHHHHHHS--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTSC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4778899988876654332111111 11222333455556 67999999999999999998766655554432
Q ss_pred ----ccccccccccC-----cc-----ccccchhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhhc
Q 014877 199 ----ALDLGFLTKAR-----KY-----TFFKPKFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDE 263 (416)
Q Consensus 199 ----~lDLgfLtk~r-----kY-----TfF~PkfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDE 263 (416)
..+...|.|+- -| ++. =+.|-| ++-|-|=+ -=|-.|| .|.++. ..--+=+=.+-=+.||
T Consensus 147 ~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~-~~lva~--~~lEgi~FysgF~~~~-~l~~~g--~m~g~~~~i~~I~RDE 220 (345)
T 1jk0_B 147 LFKEIANLPEVKHKAAFIERWISNDDSLYA-ERLVAF--AAKEGIFQAGNYASMF-WLTDKK--IMPGLAMANRNICRDR 220 (345)
T ss_dssp SGGGGCSCHHHHHHHHHHHHTTSSSSCCHH-HHHHHH--HHHHHTTTHHHHHHHH-HHTSSS--SCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHHHHHhCCcHHHH-HHHHHH--HHHHHHHHHHHHHHHH-HHHHcC--CchhHHHHHHHHHHHH
Confidence 12222222110 00 011 011212 22344321 2223333 444432 2222222233345699
Q ss_pred ccchhHHHHHHhhCcc-chhhhhhHHHHHHHHHHHHHhhhhhhccchhHHhhcCCChhhhhHHHHHHhhhhhhcc-cccc
Q 014877 264 NRHGDFFSALMKAQPQ-FLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMHVIIETNRTTARI-FPAV 341 (416)
Q Consensus 264 nRHGDfFaalmraqP~-ll~g~~~kLW~RFFLLsVfaTMyl~D~~R~~Fy~alGld~~~yD~~Vi~~TN~ta~rv-FP~v 341 (416)
..||+|...+.+.--+ .-..+...|...-.=+ -.-|+.+.- .+..+||+..+....|--.+|..-.++ +|-+
T Consensus 221 ~lH~~f~~~l~~~l~~~~~~~~v~~l~~eave~---E~~~~~~~l---~~~~~Gl~~~~~~~Yi~y~an~~L~~LG~~~~ 294 (345)
T 1jk0_B 221 GAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEI---EKEYYSNSL---PVEKFGMDLKSIHTYIEFVADGLLQGFGNEKY 294 (345)
T ss_dssp HHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHH---HHHHHTTSC---C-----------CTHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHH---HHHHHHHhc---cCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 9999999999875111 1122222222221111 022333322 167899998888777777788776655 5555
Q ss_pred cccCChh-hHHH
Q 014877 342 LDVENPE-FKRR 352 (416)
Q Consensus 342 Ldvd~P~-F~~~ 352 (416)
.++.||- |.+.
T Consensus 295 y~~~nP~~wm~~ 306 (345)
T 1jk0_B 295 YNAVNPFEFMED 306 (345)
T ss_dssp C-----------
T ss_pred CCCCCCHHHHHH
Confidence 5668994 4443
No 118
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=36.20 E-value=25 Score=30.65 Aligned_cols=94 Identities=18% Similarity=0.300 Sum_probs=59.7
Q ss_pred ChHHHhhccccccCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHH
Q 014877 81 DFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKE 159 (416)
Q Consensus 81 DFd~m~~lf~~eid~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~e~R~~FidFLerScTaEFSGflLYKE 159 (416)
++..+.+. ....++|++.+...|..+ |+.-.+--+||...+..+ +.......++-+-+.+-..=+|.|-+.|
T Consensus 78 ~l~~l~~~------~~~s~~ei~~l~~~fd~~-~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~E 150 (256)
T 2jul_A 78 GLDQLQAQ------TKFTKKELQSLYRGFKNE-CPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFED 150 (256)
T ss_dssp HHHHHHHH------TTSCHHHHHHHHHHHHHH-CTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHH
T ss_pred HHHHHHHH------hCCCHHHHHHHHHHHHhh-CCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHH
Confidence 55555552 235677899999988865 566778888887776654 2222334455555556667788888888
Q ss_pred Hhhhhcc-----cCccHHHHhhccccc
Q 014877 160 LGRRLKK-----TNPVVAEIFSLMSRD 181 (416)
Q Consensus 160 l~Rrlk~-----~NP~lae~F~lMaRD 181 (416)
+..-+.. ....+.++|..+-.|
T Consensus 151 f~~~l~~~~~~~~~~~l~~~F~~~D~d 177 (256)
T 2jul_A 151 FVVGLSILLRGTVHEKLKWAFNLYDIN 177 (256)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHhccChHHHHHHHHHHhCCC
Confidence 7665432 134677888765544
No 119
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=36.19 E-value=36 Score=27.19 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=28.9
Q ss_pred cHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 014877 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (416)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrl 164 (416)
..++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+-+
T Consensus 54 ~~~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~ 118 (183)
T 1s6c_A 54 ASTYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 118 (183)
T ss_dssp CHHHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred hHHHHHHHHHHh--CCCCCCcEeHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 344445554444 33333344445554443322111112222333334455556677666666554
No 120
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=35.96 E-value=20 Score=30.83 Aligned_cols=24 Identities=8% Similarity=0.157 Sum_probs=11.0
Q ss_pred cchhhHHHHhhhhcccCccHHHHhh
Q 014877 152 SGFLLYKELGRRLKKTNPVVAEIFS 176 (416)
Q Consensus 152 SGflLYKEl~Rrlk~~NP~lae~F~ 176 (416)
+|.|-|.|..+-++ ++|.+.+.|+
T Consensus 200 dG~Is~~EF~~~~~-~~~~~~~~~~ 223 (229)
T 3dd4_A 200 DGVVTIDEFIESCQ-KDENIMRSMQ 223 (229)
T ss_dssp SSBCCHHHHHHHHH-TCHHHHHHHH
T ss_pred CCcEeHHHHHHHHH-hCHHHHHHHH
Confidence 44455555444332 3444444443
No 121
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=35.85 E-value=34 Score=27.64 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccc
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMS 179 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMa 179 (416)
++|..+...| |.|+.-.+--+||...+..+....-..-++-+.+.+-..=+|.|-|.|...-+....+.+.++|..+-
T Consensus 48 ~~l~~~F~~~--D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~~aF~~~D 125 (147)
T 1wy9_A 48 EAFKVKYMEF--DLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRMILMYE 125 (147)
T ss_dssp HHHHHHHTTS--CCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSSGGGGGGGGGGCC
T ss_pred HHHHHHHHHH--CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHc
Confidence 3444444333 77777788888887776655322222234444455556668999999988877655677888888776
Q ss_pred cch
Q 014877 180 RDE 182 (416)
Q Consensus 180 RDE 182 (416)
+|-
T Consensus 126 ~d~ 128 (147)
T 1wy9_A 126 EKN 128 (147)
T ss_dssp CC-
T ss_pred cCC
Confidence 653
No 122
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=35.77 E-value=13 Score=26.00 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
++..+...+ |.|+.-.+--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-++
T Consensus 4 ~l~~~F~~~--D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 4 DMERIFKRF--DTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp HHHHHHHHH--CTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 444444444 455555555555544433221 11112244444555566678888888877664
No 123
>4g5o_E G-protein-signaling modulator 2; galphai, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 2.90A {Mus musculus} PDB: 4g5q_E* 4g5r_E*
Probab=35.40 E-value=9.1 Score=25.31 Aligned_cols=16 Identities=31% Similarity=0.721 Sum_probs=12.9
Q ss_pred hhHHHHHHhhCccchh
Q 014877 267 GDFFSALMKAQPQFLN 282 (416)
Q Consensus 267 GDfFaalmraqP~ll~ 282 (416)
-|||++++|+|.+-..
T Consensus 2 edffslilrsqakrmd 17 (26)
T 4g5o_E 2 EDFFSLILRSQAKRMD 17 (26)
T ss_dssp CCHHHHHHHHHHCSCG
T ss_pred chHHHHHHHHHHHhhh
Confidence 3899999999876544
No 124
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=35.37 E-value=17 Score=37.62 Aligned_cols=103 Identities=18% Similarity=0.226 Sum_probs=46.5
Q ss_pred cCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC--ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---
Q 014877 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM--QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT--- 167 (416)
Q Consensus 93 id~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l--~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~--- 167 (416)
+......+|++.|+.++ |.|..-.+-=+||...+..+ .++.+++|-.|= .. +|++-+.||.+=+++.
T Consensus 40 lg~~~s~~el~~lf~~~--D~d~~G~I~f~EF~~~~~~l~~~~el~~aF~~fD-----~~-~G~Is~~EL~~fL~~~qge 111 (624)
T 1djx_A 40 LNIQVDDGYARKIFREC--DHSQTDSLEDEEIETFYKMLTQRAEIDRAFEEAA-----GS-AETLSVERLVTFLQHQQRE 111 (624)
T ss_dssp ------------------------------CTTHHHHHHTCCHHHHHHHHHHH-----TT-SSSEEHHHHHHHHHHTSCC
T ss_pred cCCCCCHHHHHHHHHHh--CCCCCCeEeHHHHHHHHHHhccHHHHHHHHHHhc-----CC-CCeecHHHHHHHHHHHhCC
Confidence 35556678899999987 44455567777886655543 567888888773 23 7999999998877532
Q ss_pred ----CccHHHHhhccccc-hhhhh------hhhhhhhcccccccccc
Q 014877 168 ----NPVVAEIFSLMSRD-EARHA------GFLNKGLSDFNYALDLG 203 (416)
Q Consensus 168 ----NP~lae~F~lMaRD-EARHA------GFlNkal~Df~l~lDLg 203 (416)
...+.+++.-+-.| ++++. ||++--+++.|-.+|-.
T Consensus 112 ~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~~~~~~p~ 158 (624)
T 1djx_A 112 EEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLA 158 (624)
T ss_dssp SSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTTTBSBCGG
T ss_pred CCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCccccccCcc
Confidence 12356666665555 23333 35555566655555543
No 125
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=35.25 E-value=22 Score=29.29 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=46.9
Q ss_pred ccHHHHHHHHHH-------Hh-hccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC
Q 014877 97 LNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (416)
Q Consensus 97 ~~r~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N 168 (416)
...+||.+++.. |+ -|.|+.-++--+||...+..+....-..-++-+.+.+ .=+|.|-|.|..+-+. ..
T Consensus 90 i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~-~~ 166 (198)
T 1juo_A 90 MGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCV-KL 166 (198)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHH-HH
T ss_pred ECHHHHHHHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHH-HH
Confidence 445565555433 22 2666666666677766554432111111222222222 3467777777766554 23
Q ss_pred ccHHHHhhccccchhhhhhhhhhh
Q 014877 169 PVVAEIFSLMSRDEARHAGFLNKG 192 (416)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlNka 192 (416)
+.+.++|..+-+| +-|.|+..
T Consensus 167 ~~~~~~F~~~D~d---~~G~is~~ 187 (198)
T 1juo_A 167 RALTDSFRRRDTA---QQGVVNFP 187 (198)
T ss_dssp HHHHHHHHHTCTT---CCSEEEEE
T ss_pred HHHHHHHHHhCCC---CCCeEeec
Confidence 5677777776554 45665543
No 126
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=35.03 E-value=54 Score=26.75 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=++
T Consensus 52 ~~~~~~f~~~--D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~ 115 (198)
T 2r2i_A 52 KYVEQMFETF--DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115 (198)
T ss_dssp HHHHHHHHHH--CTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHH--CCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 4577777776 556666677778876665443222222333444555677789999999887664
No 127
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=34.83 E-value=13 Score=29.39 Aligned_cols=25 Identities=8% Similarity=0.349 Sum_probs=21.2
Q ss_pred hhhhhhhccCCCCccccChHHHhhc
Q 014877 64 NKTAIKETLLTPRFYTTDFDEMETL 88 (416)
Q Consensus 64 ~k~a~~etlLTPRFYTTDFd~m~~l 88 (416)
....+++.|-.|-||.+|++++..+
T Consensus 37 ~i~~le~~ladp~~y~~d~~~~~~l 61 (89)
T 2lw1_A 37 KLEALQTQVADASFFSQPHEQTQKV 61 (89)
T ss_dssp HHHHHHHHHHSTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHhCcccccCCHHHHHHH
Confidence 3566788899999999999998875
No 128
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=34.58 E-value=36 Score=27.20 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=47.1
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNK 191 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNk 191 (416)
|.|..-.+--+||...+..+....-..-++-+.+.+. .=+|.|-|.|..+-+. ....+.++|..+-+| +-|.|..
T Consensus 87 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~~G~i~~ 161 (173)
T 1alv_A 87 DVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLV-RLDAMFRAFKSLDKD---GTGQIQV 161 (173)
T ss_dssp CTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHH-HHHHHHHHHHHHSSS---CCSEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeecH
Confidence 7777778888888776654322222223333344444 5678888888776654 236778888887665 4566554
Q ss_pred h
Q 014877 192 G 192 (416)
Q Consensus 192 a 192 (416)
.
T Consensus 162 ~ 162 (173)
T 1alv_A 162 N 162 (173)
T ss_dssp E
T ss_pred h
Confidence 3
No 129
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=34.08 E-value=36 Score=27.07 Aligned_cols=75 Identities=17% Similarity=0.301 Sum_probs=46.4
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlN 190 (416)
|.|+.-.+--+||......+....-..-++-+.+.+-..=+|.|-|.|..+-+. ....+.++|..+-+| +-|+|.
T Consensus 84 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~-~~~~~~~~F~~~D~d---~dG~i~ 158 (172)
T 2znd_A 84 DRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI-VLQRLTDIFRRYDTD---QDGWIQ 158 (172)
T ss_dssp CTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HHHHHHHHHHHHCTT---SSSCCC
T ss_pred CCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHHHHHHHHHHhCCC---CCCeEe
Confidence 677777777777776665543222233345555555556678888888776554 236677778777554 456664
No 130
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=34.05 E-value=1.2e+02 Score=26.07 Aligned_cols=149 Identities=5% Similarity=-0.075 Sum_probs=108.9
Q ss_pred hcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc--c
Q 014877 129 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--L 205 (416)
Q Consensus 129 d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--L 205 (416)
-+|+++.++.-++-|-.-...|++..+-|+--...++..+ ..+.+.|.-.+-+|..||-=|-.-+...|-..++.. +
T Consensus 20 ~~l~~~~~~~vi~~LN~~La~~~~~~~~~~~~hw~v~G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~ 99 (182)
T 1tjo_A 20 LRMDADRAEQCVDALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETL 99 (182)
T ss_dssp TTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Confidence 4578889999999999999999999999999999985553 458999999999999999999999999998888732 2
Q ss_pred ---cccCcc--ccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhhCccc
Q 014877 206 ---TKARKY--TFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQF 280 (416)
Q Consensus 206 ---tk~rkY--TfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmraqP~l 280 (416)
+.-+.+ .+..++=++=...=.|+..=.+|=-+...-+..-+ +.--..++.+..++-.|-+++.+.+...|-.
T Consensus 100 ~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~~i~~a~e~~D---~~T~dll~~~l~~~Ek~~w~L~a~l~~~~~~ 176 (182)
T 1tjo_A 100 QAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGD---HATAHMLREGLIELEDDAHHIEHYLEDDTLV 176 (182)
T ss_dssp HHHCCSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHHTSSCCSC
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCC---HHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 211222 23456666655555555444444444444445444 4455667778888999999999999865543
No 131
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=34.05 E-value=48 Score=28.40 Aligned_cols=95 Identities=14% Similarity=0.266 Sum_probs=51.6
Q ss_pred ccChHHHhhccccccCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChH-HHHHHHHHHHhhhhccccchhhH
Q 014877 79 TTDFDEMETLFNTEINKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLY 157 (416)
Q Consensus 79 TTDFd~m~~lf~~eid~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e-~R~~FidFLerScTaEFSGflLY 157 (416)
..+++.+.+. ....++|++.+.+.|..+ |+.-.+--+||...+..+-+. .....++-+-+.+-..=+|.|-+
T Consensus 36 ~~~l~~l~~~------~~~s~~ei~~l~~~Fd~~-d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~ 108 (224)
T 1s1e_A 36 PEGLEQLEAQ------TNFTKRELQVLYRGFKNE-CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKF 108 (224)
T ss_dssp --CHHHHHHH------SSCCHHHHHHHHHHHHHH-CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCH
T ss_pred HHHHHHHHHH------cCCCHHHHHHHHHHHHhh-CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeH
Confidence 3455555553 234566777777777775 344556667777766655321 22333444444455556677777
Q ss_pred HHHhhhhcc-----cCccHHHHhhcccc
Q 014877 158 KELGRRLKK-----TNPVVAEIFSLMSR 180 (416)
Q Consensus 158 KEl~Rrlk~-----~NP~lae~F~lMaR 180 (416)
.|...-+.. ....+.++|..+-.
T Consensus 109 ~Ef~~~l~~~~~~~~~~~l~~~F~~~D~ 136 (224)
T 1s1e_A 109 EDFVTALSILLRGTVHEKLRWTFNLYDI 136 (224)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHcC
Confidence 666544321 12356667765543
No 132
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=33.69 E-value=42 Score=29.34 Aligned_cols=140 Identities=16% Similarity=0.246 Sum_probs=107.4
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc-----ccccC
Q 014877 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF-----LTKAR 209 (416)
Q Consensus 136 R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf-----Ltk~r 209 (416)
++.-++-|-.-...|++..+.|+-....++..+ ..+++.|.-.+-+|..||--|-.-+...|-..+.+. ++.-+
T Consensus 23 ~~~v~~~LN~~La~e~~~~~~y~~~hw~v~G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~I~ 102 (188)
T 2clb_A 23 IKKLVDKLVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACS 102 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhccCC
Confidence 566789999999999999999999999885542 579999999999999999999999999999988664 33333
Q ss_pred -c---cccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhhCcc
Q 014877 210 -K---YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQ 279 (416)
Q Consensus 210 -k---YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmraqP~ 279 (416)
. -.+..++=++=+.+=.|+.-=.+|=.+...-+.. |..-..++ +.+..++-.|-+.|..++...|.
T Consensus 103 ~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~~i~~A~e~-D~~T~dlL---~~~l~e~ee~~~~l~~~L~~~~~ 172 (188)
T 2clb_A 103 DAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYGK-DPRTYDLA---QRILQEEIEHEAWFLELLYGRPS 172 (188)
T ss_dssp CCCCCTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH---HHHHHHHHHHHHHHHHHHSCCCC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHH---HHHHHHHHHHHHHHHHHhccCCC
Confidence 2 2345777777777777776666666666666666 66655555 44556677799999999987654
No 133
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=33.68 E-value=29 Score=27.81 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=49.5
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCC-hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCc
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNP 169 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~-----~NP 169 (416)
...++|+..+.+.|..| |+...+--+||...+..+- .......++-+-+.+-..=+|.|-+.|+..-+.. ...
T Consensus 21 ~~~~~~i~~~~~~fd~~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1fpw_A 21 YFDRREIQQWHKGFLRD-CPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99 (190)
T ss_dssp CSTHHHHHHHHHHHHHH-CTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTH
T ss_pred CCCHHHHHHHHHHHHHH-CCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHH
Confidence 44567788888888777 5555666677766655431 0011122333444555666888888887765432 233
Q ss_pred cHHHHhhccccc
Q 014877 170 VVAEIFSLMSRD 181 (416)
Q Consensus 170 ~lae~F~lMaRD 181 (416)
.+.++|..+-+|
T Consensus 100 ~~~~~f~~~D~d 111 (190)
T 1fpw_A 100 KLSWAFELYDLN 111 (190)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHHHhcCC
Confidence 566677665544
No 134
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=33.27 E-value=41 Score=26.86 Aligned_cols=76 Identities=18% Similarity=0.239 Sum_probs=42.9
Q ss_pred ccCCCCcccCchhHHHhhcC-----------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----CccHHHHh
Q 014877 112 DYNQTHFVRNKEFKEAADKM-----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NPVVAEIF 175 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l-----------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~-----NP~lae~F 175 (416)
|.|+.-.+--+||...+..+ ....-...++-+-+.+-..=+|.|-|.|...-+... ...+.++|
T Consensus 50 D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F 129 (191)
T 3khe_A 50 DNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAF 129 (191)
T ss_dssp CTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 55555555555665544433 223334455556666666667888888776544211 23567777
Q ss_pred hccccchhhhhhhhh
Q 014877 176 SLMSRDEARHAGFLN 190 (416)
Q Consensus 176 ~lMaRDEARHAGFlN 190 (416)
..+-.| +-|+|+
T Consensus 130 ~~~D~d---~~G~I~ 141 (191)
T 3khe_A 130 QQFDSD---GSGKIT 141 (191)
T ss_dssp HHHCTT---CSSEEC
T ss_pred HHHCCC---CcCcCC
Confidence 776554 455554
No 135
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=33.13 E-value=49 Score=27.65 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=++
T Consensus 57 ~~~~~~f~~~--D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 120 (211)
T 2ggz_A 57 KHIDQVYNTF--DTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM 120 (211)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHH--cCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 4577777776 566666677778876665432222222334444556677799999999987664
No 136
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=33.09 E-value=55 Score=24.64 Aligned_cols=83 Identities=18% Similarity=0.067 Sum_probs=47.2
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCC--hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc----
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ--GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---- 167 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~--~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~---- 167 (416)
...+..++++.++.. |..--+--+||...+..+. ......-+.-+-+.+-..=+|.|-..|+.+=++.-
T Consensus 35 ~~~~~~~~~~~~~~~-----~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~ 109 (145)
T 2bl0_B 35 GKNPTNAELNTIKGQ-----LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDAL 109 (145)
T ss_dssp TCCCCHHHHHHHHHH-----HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCC
T ss_pred CCCCCHHHHHHHHHh-----cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCC
Confidence 455566677777766 4445566677766665542 22222222222234455667888888877766433
Q ss_pred -CccHHHHhhccccc
Q 014877 168 -NPVVAEIFSLMSRD 181 (416)
Q Consensus 168 -NP~lae~F~lMaRD 181 (416)
...+.++|..+-.|
T Consensus 110 ~~~~~~~~~~~~d~~ 124 (145)
T 2bl0_B 110 TSSEVEELMKEVSVS 124 (145)
T ss_dssp CHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 23467777766554
No 137
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=32.87 E-value=15 Score=31.73 Aligned_cols=23 Identities=26% Similarity=0.557 Sum_probs=19.5
Q ss_pred cchhhHHHHH-HHhhhCCCCcccc
Q 014877 229 IGYWRYITIY-RHLKANPEFQCYP 251 (416)
Q Consensus 229 IGYwRYItIy-RHLe~~Pe~r~~P 251 (416)
|-|.||++|+ ..|-+|||++-..
T Consensus 61 ily~R~~~L~~e~IpkHpdy~~~~ 84 (146)
T 2xze_A 61 ILYNKYITLFIEKLPKHRDYKSAV 84 (146)
T ss_dssp HHHHHHHHHHHTTGGGSTTTTTCC
T ss_pred HHHHHHHHHHHHHcccCccchhhh
Confidence 6689999999 6999999997543
No 138
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=32.53 E-value=28 Score=28.91 Aligned_cols=81 Identities=19% Similarity=0.323 Sum_probs=47.2
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCC-----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT- 167 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-----~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~- 167 (416)
...+..++++.|+..+ |.|..-.+-=+||...+..+. .+.+..|-.| -..=+|+|-..|+.+=++.-
T Consensus 40 g~~~~~~~~~~l~~~~--D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~-----D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 40 GSELMESEIKDLMDAA--DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYF-----DKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp TCCCCHHHHHHHHHHT--CTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHT-----TTTCSSEEEHHHHHHTTTTTT
T ss_pred CCCCCHHHHHHHHHHc--CCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHH-----CCCCCCcCcHHHHHHHHHHcC
Confidence 4445566777777765 444444555567766554442 3455555433 45568888888888766432
Q ss_pred --CccHHHHhhccccc
Q 014877 168 --NPVVAEIFSLMSRD 181 (416)
Q Consensus 168 --NP~lae~F~lMaRD 181 (416)
..++.++|..+-.|
T Consensus 113 ~~~~~~~~~~~~~D~d 128 (188)
T 1s6i_A 113 LDDIHIDDMIKEIDQD 128 (188)
T ss_dssp CCTTHHHHHHHHHCSS
T ss_pred CCHHHHHHHHHHHCCC
Confidence 23456666555433
No 139
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=32.48 E-value=67 Score=24.71 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=37.0
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCC----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~ 166 (416)
...+..++++.++..+ |.|..-.+-=+||...+.... ......-+.-+-+.+-..=+|.|-..|+.+=++.
T Consensus 49 ~~~~~~~~~~~~~~~~--D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~ 123 (161)
T 1dtl_A 49 GQNPTPEELQEMIDEV--DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQA 123 (161)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTT
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4445566677777665 455555566666755443321 1111111222223345566788888888776643
No 140
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=32.47 E-value=55 Score=28.05 Aligned_cols=63 Identities=16% Similarity=0.120 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrl 164 (416)
++++.+++.+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=+
T Consensus 89 ~~~~~~f~~~--D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l 151 (224)
T 1s1e_A 89 TYAHYLFNAF--DTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIV 151 (224)
T ss_dssp HHHHHHHHHH--CTTCSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHH
T ss_pred HHHHHHHHHh--cCCCCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHH
Confidence 3444444433 44444445555665544433211112222233334455667777777776654
No 141
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=32.25 E-value=52 Score=25.56 Aligned_cols=65 Identities=18% Similarity=0.263 Sum_probs=42.7
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
...+..+|++.|+.++ |.|..-.+-=+||...+... ..+.++.|--| -..=+|++-..|+.+=++
T Consensus 36 g~~~~~~~~~~~~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~ 106 (143)
T 2obh_A 36 GFEPKKEEIKKMISEI--DKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLF-----DDDETGKISFKNLKRVAK 106 (143)
T ss_dssp TCCCCHHHHHHHHHHH--TTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCSSSBCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--CCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHh-----CCCCCCcCcHHHHHHHHH
Confidence 5566778899999887 55665566667786554332 12455555433 556689999999887664
No 142
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=32.24 E-value=23 Score=28.09 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=46.4
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhcc-cCccHHHHhhccccchhhhhhhhhhhhcccccc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKK-TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYA 199 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~-~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~ 199 (416)
-.+-|+.....|-...-.|+++.+...+ ..|..++++.-+..||-+|+-+|...|.+.+..
T Consensus 86 ~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~~~~~ 147 (149)
T 2qqy_A 86 VREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLNDKAMV 147 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455666777788888889998877543 578999999999999999999999999876543
No 143
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=31.78 E-value=84 Score=24.80 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=34.3
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
...+..++++.++..+ |.|..-.+--+||...+... .......-+.-+-+.+-..=+|.|-..|+.+-++
T Consensus 41 ~~~~~~~~~~~l~~~~--D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 111 (179)
T 2f2o_A 41 GQNPTEAELQDMINEV--DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 111 (179)
T ss_dssp TCCCCHHHHHHHHHHH--CTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHh--ccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 4445556666666665 44444455555665443322 1111111112222333455577777777776554
No 144
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=31.74 E-value=17 Score=29.53 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=24.6
Q ss_pred ccchhhHH-HHhhhhcccCccHH-------HHhhccccch
Q 014877 151 FSGFLLYK-ELGRRLKKTNPVVA-------EIFSLMSRDE 182 (416)
Q Consensus 151 FSGflLYK-El~Rrlk~~NP~la-------e~F~lMaRDE 182 (416)
-|+|+||- |-.++||..||.+. +....|+-+|
T Consensus 27 ~sAf~lf~~e~R~kik~enP~~s~~~~eIse~Wk~ls~ee 66 (90)
T 2yuk_A 27 TVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQE 66 (90)
T ss_dssp SSSHHHHHHHHCTTHHHHCCSHHHHHHHHHHHHHHSCHHH
T ss_pred ccHHHHHHHHhHHHHHHHCcCccchHHHHHHHHHcCCHHH
Confidence 47888887 66778898999987 6777777655
No 145
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=31.50 E-value=38 Score=25.61 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=49.1
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC----------ChHHHHHHHHHHHhhhhccccchhhHHHHhhh
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM----------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l----------~~e~R~~FidFLerScTaEFSGflLYKEl~Rr 163 (416)
...+.+++++.++..+-.| ..-.+-=+||...+... ..+.+..| +.+-..=+|.|-..|+.+=
T Consensus 41 ~~~~~~~~~~~l~~~~d~~--~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~ 113 (153)
T 3ox6_A 41 GYMPTEMELIELSQQINMN--LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAF-----REFDTNGDGEISTSELREA 113 (153)
T ss_dssp TCCCCHHHHHHHHHHHHTT--STTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHH-----HHHCTTCSSSBCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCC--CCccCcHHHHHHHHHHHhhccccccccHHHHHHHH-----HHhCCCCCCcCcHHHHHHH
Confidence 5566778888888887544 44445556775544321 12234444 3446677899999999876
Q ss_pred hcc------cCccHHHHhhccccc
Q 014877 164 LKK------TNPVVAEIFSLMSRD 181 (416)
Q Consensus 164 lk~------~NP~lae~F~lMaRD 181 (416)
++. ....+.++|..+-.|
T Consensus 114 l~~~~~~~~~~~~~~~~~~~~d~~ 137 (153)
T 3ox6_A 114 MRALLGHQVGHRDIEEIIRDVDLN 137 (153)
T ss_dssp HHHHHSSCCCHHHHHHHHHHHCSS
T ss_pred HHHHhcCCCCHHHHHHHHHHhCCC
Confidence 654 123466666665443
No 146
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=31.47 E-value=57 Score=25.71 Aligned_cols=62 Identities=16% Similarity=0.211 Sum_probs=40.7
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
.+..++++.|++++ |.|..-.+-=+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++
T Consensus 36 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~ 97 (165)
T 1k94_A 36 PFSLETCRIMIAML--DRDHTGKMGFNAFKELWAAL-NAWKENFMTV-----DQDGSGTVEHHELRQAIG 97 (165)
T ss_dssp CCCHHHHHHHHHHH--CTTCSSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSBCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCceECHHHHHHHHH
Confidence 44567888888876 55555566667776665543 4556666433 455688888888877664
No 147
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=31.33 E-value=34 Score=27.12 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhccCCCCcccCchhHHHhhcCCh-HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHH
Q 014877 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQG-PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (416)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~-e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~la 172 (416)
.+++..+...| |.|..-++--+||......+.. ..-..=++-+.+.+-..=+|.|-|.|..+-+++..|.+-
T Consensus 39 ~~~l~~~F~~~--D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 111 (135)
T 3h4s_E 39 VSELCKGFSLL--ADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMM 111 (135)
T ss_dssp HHHHHHHHHHH--SBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCHHHH
Confidence 34555555555 7777788888888777665441 222223444555556666899999998887765555443
No 148
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=31.21 E-value=75 Score=30.84 Aligned_cols=70 Identities=11% Similarity=0.069 Sum_probs=41.4
Q ss_pred HHhhcCChHHHHHHHHHHHhhhhcc-ccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcccc
Q 014877 126 EAADKMQGPLRQIFVEFLERSCTAE-FSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN 197 (416)
Q Consensus 126 ~~~d~l~~e~R~~FidFLerScTaE-FSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~Df~ 197 (416)
++|.+|+++.|..+.-=|--=..++ .-|-.+--.+..-+ ++|++.-++...+=.|+.|+=.-..-+.-++
T Consensus 60 ~dw~~Lt~~Er~~~~~~l~~~~~~Dsiv~~~~~~~~~~~v--~~pE~~~~l~~~~~~E~iHs~sYs~il~tl~ 130 (375)
T 1mxr_A 60 IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLI--SIPELETWVETWAFSETIHSRSYTHIIRNIV 130 (375)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGB--CSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4777888888876653221100111 11111223344555 6799998998888899999876555555543
No 149
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=30.96 E-value=1.2e+02 Score=24.60 Aligned_cols=138 Identities=8% Similarity=0.001 Sum_probs=103.6
Q ss_pred ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc------
Q 014877 132 QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF------ 204 (416)
Q Consensus 132 ~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf------ 204 (416)
..+.++.-++-|-.-...|++..+.|+-..=.++..+ ..+++.|.-.+-+|..||-=|-+-+.+.|-..+++.
T Consensus 2 ~~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~ 81 (149)
T 1n1q_A 2 KTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE 81 (149)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHhccchheeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhH
Confidence 3467788899999999999999999999988886554 568999999999999999999999999999998875
Q ss_pred --ccccCccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHH
Q 014877 205 --LTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (416)
Q Consensus 205 --Ltk~rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalm 274 (416)
+.... -.+ .++=++=+.+=.|+..=.+|=.+...-+..-+..-..++ +....+|-.|-.++.+.+
T Consensus 82 s~i~~~~-~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll---~~~l~e~ek~~w~l~~~l 148 (149)
T 1n1q_A 82 ASIKEAT-GGE-SAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADML---DAIEAGLEKHVWMLEAFL 148 (149)
T ss_dssp CCSCCCC-SCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---HHHHHHHHHHHHHHHHhc
Confidence 33322 223 777787777777776655555555555555565555554 445566777877776654
No 150
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=30.70 E-value=39 Score=25.47 Aligned_cols=81 Identities=10% Similarity=0.145 Sum_probs=50.1
Q ss_pred HHHHHHHHHh-hccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc------cCccHHH
Q 014877 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK------TNPVVAE 173 (416)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~------~NP~lae 173 (416)
+...+.+-|+ -|.|+.-.+--+||...+..+....-..-++-|.+.+...-+|.|-|.|...-+.. ....+.+
T Consensus 9 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 88 (147)
T 4ds7_A 9 QIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE 88 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHH
Confidence 4444444443 27777777888888776665543333444666667777777898988887654421 1245667
Q ss_pred Hhhccccc
Q 014877 174 IFSLMSRD 181 (416)
Q Consensus 174 ~F~lMaRD 181 (416)
+|..+-+|
T Consensus 89 ~F~~~D~d 96 (147)
T 4ds7_A 89 AFKVFDKN 96 (147)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCCC
Confidence 77766444
No 151
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=30.19 E-value=85 Score=25.09 Aligned_cols=63 Identities=14% Similarity=0.086 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrl 164 (416)
++++.++..+ |.|..-.+--+||...+..+.......-+..+-+.+-..=+|.|-+.|+.+=+
T Consensus 63 ~~~~~~f~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~ 125 (193)
T 1bjf_A 63 KFAEHVFRTF--DANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125 (193)
T ss_dssp HHHHHHHHHH--CSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHH
Confidence 4455555544 55555556666776555443222222223333345556667888888877644
No 152
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=30.14 E-value=57 Score=28.87 Aligned_cols=132 Identities=19% Similarity=0.111 Sum_probs=87.8
Q ss_pred HHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccccc
Q 014877 138 IFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKP 216 (416)
Q Consensus 138 ~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~P 216 (416)
.-++-|......|+..--+|--+++..++. -|.++.+|.-.|.+|..||.-+=+.|. |-.+.++-.. ..-.+=.+
T Consensus 8 ~t~~~Ln~a~~~E~~A~~~Yl~~A~~a~~~G~~~iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~--p~~~~~s~ 83 (191)
T 1lko_A 8 RTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAF--PAGIIADT 83 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCC--CCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcC--CccccCCH
Confidence 367788888899999999999999887655 699999999999999999987777775 4333333211 11111123
Q ss_pred hhhhhhhhcccccch-hhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHhh
Q 014877 217 KFIFYATYLSEKIGY-WRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKA 276 (416)
Q Consensus 217 kfIfYAtYLSEKIGY-wRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmra 276 (416)
.=.+=+.+=-|..-+ .+|=.+...-+ +-.++.+.++|+.--.+|-+|.+-|..++..
T Consensus 84 ~e~l~~al~~E~~e~t~~y~~~~~~A~---eegd~~~~~~f~~~~~~E~ehe~~~~~~l~~ 141 (191)
T 1lko_A 84 HANLIASAAGEHHEYTEMYPSFARIAR---EEGYEEIARVFASIAVAEEFHEKRFLDFARN 141 (191)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHH---HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444552211 22333333322 2346677788888889999999999988864
No 153
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=29.80 E-value=54 Score=27.16 Aligned_cols=76 Identities=9% Similarity=-0.045 Sum_probs=37.2
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC-C-----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-Q-----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~-----~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~ 167 (416)
.+.+..+++..|+.++ .-.+-=+||...+... . .+.+..|- .+-..=+|+|-..||.+=+ .-
T Consensus 87 g~~~~~~~~~~l~~~~------~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~-----~~D~d~~G~Is~~El~~~l-~~ 154 (196)
T 3dtp_E 87 GRLCTEQELDSMVAEA------PGPINFTMFLTIFGDRIAGTDEEDVIVNAFN-----LFDEGDGKCKEETLKRSLT-TW 154 (196)
T ss_dssp SCCCCHHHHHHHHTTS------SSCCBHHHHHHHHHHCCCSSCCHHHHHHHHH-----TTCSSSSCCBHHHHHHHHH-HS
T ss_pred CCCCCHHHHHHHHHHc------cCCCcHHHHHHHHHHHhcCCCcHHHHHHHHH-----HHCCCCCCcCcHHHHHHHH-Hc
Confidence 4455555666666554 1223334554444321 1 22333332 3344556777777766655 32
Q ss_pred C-----ccHHHHhhccccc
Q 014877 168 N-----PVVAEIFSLMSRD 181 (416)
Q Consensus 168 N-----P~lae~F~lMaRD 181 (416)
. .++.++|..+-.|
T Consensus 155 g~~~~~~~~~~l~~~~D~d 173 (196)
T 3dtp_E 155 GEKFSQDEVDQALSEAPID 173 (196)
T ss_dssp SSCCCHHHHHHHHHSSCEE
T ss_pred CCCCCHHHHHHHHHHcCCC
Confidence 2 2456666666544
No 154
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=29.45 E-value=83 Score=24.88 Aligned_cols=63 Identities=24% Similarity=0.305 Sum_probs=42.0
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~ 166 (416)
.+..++++.|+.++ |.|..-.+--+||...+..+ .+.++.|-.| -..=+|.|-..|+.+-++.
T Consensus 38 ~~~~~~~~~l~~~~--D~~~~g~i~~~eF~~~~~~~-~~~~~~F~~~-----D~d~~G~i~~~el~~~l~~ 100 (167)
T 1gjy_A 38 PFNLETCRLMVSML--DRDMSGTMGFNEFKELWAVL-NGWRQHFISF-----DSDRSGTVDPQELQKALTT 100 (167)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHH-HHHHHHHHHH-----CTTCCSEECHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHH--CCCCCCcCCHHHHHHHHHHH-HHHHHHHHHh-----CCCCCCcCCHHHHHHHHHH
Confidence 44567888888876 55555566667787666553 4566666543 5566888888888876653
No 155
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=29.38 E-value=84 Score=22.20 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~ 167 (416)
+++..+...+ |.|+.-.+--+||...+..+. ..-..-++-+.+.+-..=+|.|-|.|...-++..
T Consensus 11 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 11 ADRERIFKRF--DTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHH--CTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHH--CCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 3444444444 777777788888877766654 2223335555556666668889998888776543
No 156
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=29.33 E-value=80 Score=23.91 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=27.4
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHh
Q 014877 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLER 145 (416)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLer 145 (416)
..+++|++++..|..-+. ..|+++.++..++||..
T Consensus 45 ~~~~~W~~~v~~M~~~~g--------------~~ls~~e~~~I~~YL~~ 79 (81)
T 2blf_B 45 KGQAFWDAEVQKMIKVYH--------------APVDEADAKAIADYLAK 79 (81)
T ss_dssp CCHHHHHHHHHHHHHTSC--------------CCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcC--------------CCCCHHHHHHHHHHHHH
Confidence 346899999999986432 36899999999999964
No 157
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=29.31 E-value=37 Score=27.20 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=51.4
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC-ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc-----Cc
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM-QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-----NP 169 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l-~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~-----NP 169 (416)
...++|++.+.+.|..| ++.-.+--+||...+..+ +...-...++-+-+.+-..=+|.|-+.|+..-+... ..
T Consensus 21 ~~~~~~i~~~f~~fd~~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~ 99 (190)
T 1g8i_A 21 YFTEKEVQQWYKGFIKD-CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDE 99 (190)
T ss_dssp SSCHHHHHHHHHHHHHH-CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHHHHHHHh-CCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHH
Confidence 34567888888888777 445566667787666544 111112335556666667778888888887655321 23
Q ss_pred cHHHHhhccccc
Q 014877 170 VVAEIFSLMSRD 181 (416)
Q Consensus 170 ~lae~F~lMaRD 181 (416)
.+.++|..+-+|
T Consensus 100 ~~~~~f~~~D~d 111 (190)
T 1g8i_A 100 KLRWAFKLYDLD 111 (190)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHhhcCC
Confidence 466666665444
No 158
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=29.10 E-value=1.7e+02 Score=24.55 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=48.6
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
...++++..+...+ |.|+.-.+--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|..+-+.
T Consensus 100 ~~~~~~l~~~F~~~--D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 175 (272)
T 2be4_A 100 LDNSVEFMKIWRKY--DADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILA 175 (272)
T ss_dssp CCCHHHHHHHHHHH--CTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSC
T ss_pred cccHHHHHHHHHHh--CCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHh
Confidence 44556676666666 777888888899976654 345554455566677777777899999999988764
No 159
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=29.07 E-value=73 Score=24.92 Aligned_cols=33 Identities=9% Similarity=0.087 Sum_probs=18.1
Q ss_pred hccccchhhHHHHhhhhccc-----CccHHHHhhcccc
Q 014877 148 TAEFSGFLLYKELGRRLKKT-----NPVVAEIFSLMSR 180 (416)
Q Consensus 148 TaEFSGflLYKEl~Rrlk~~-----NP~lae~F~lMaR 180 (416)
-..=+|+|-..|+.+=++.- ...+.++|..+-.
T Consensus 105 D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~ 142 (166)
T 2mys_B 105 DPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 142 (166)
T ss_pred CCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCC
Confidence 44556777777766655432 2245566655533
No 160
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=29.05 E-value=23 Score=28.34 Aligned_cols=81 Identities=20% Similarity=0.263 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---CccHHHHh
Q 014877 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIF 175 (416)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~---NP~lae~F 175 (416)
.++++.++..+ |.|..-.+--+||...+..........-+..+-+.+-..=+|.|-..|+.+-++.. ...+.++|
T Consensus 86 ~~~~~~~~~~~--D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~ 163 (191)
T 3khe_A 86 EAEVDHILQSV--DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVL 163 (191)
T ss_dssp HHHHHHHHHHT--CTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHH
Confidence 33444444443 66666677777886655433222222223333345567789999999999887521 23355555
Q ss_pred hccccc
Q 014877 176 SLMSRD 181 (416)
Q Consensus 176 ~lMaRD 181 (416)
..+..|
T Consensus 164 ~~~D~~ 169 (191)
T 3khe_A 164 QECDKN 169 (191)
T ss_dssp HHHCTT
T ss_pred HHhCCC
Confidence 555443
No 161
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=28.66 E-value=52 Score=25.28 Aligned_cols=82 Identities=11% Similarity=0.147 Sum_probs=45.9
Q ss_pred HHHHHHHHHHh-hccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---------cCc
Q 014877 100 AEFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---------TNP 169 (416)
Q Consensus 100 ~E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~---------~NP 169 (416)
++++.+.+-|+ -|.|+.-.+--+||......+.......-++-+.+.+...=+|.|-|.|...-+.. ...
T Consensus 17 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~ 96 (162)
T 1top_A 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEE 96 (162)
T ss_dssp HHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHH
Confidence 34444444443 36677777777778766654432222334444555555666777777776554432 123
Q ss_pred cHHHHhhccccc
Q 014877 170 VVAEIFSLMSRD 181 (416)
Q Consensus 170 ~lae~F~lMaRD 181 (416)
.+.++|..+-+|
T Consensus 97 ~~~~~F~~~D~d 108 (162)
T 1top_A 97 ELANCFRIFDKN 108 (162)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhCCC
Confidence 466777766544
No 162
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=27.68 E-value=43 Score=25.88 Aligned_cols=13 Identities=15% Similarity=0.539 Sum_probs=6.0
Q ss_pred cchhhHHHHhhhh
Q 014877 152 SGFLLYKELGRRL 164 (416)
Q Consensus 152 SGflLYKEl~Rrl 164 (416)
+|.|-|.|..+-+
T Consensus 136 dg~i~~~eF~~~~ 148 (156)
T 1wdc_C 136 EGNVKYEDFVKKV 148 (156)
T ss_dssp TSEEEHHHHHHHH
T ss_pred CCcEeHHHHHHHH
Confidence 4445454444433
No 163
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=27.53 E-value=56 Score=28.03 Aligned_cols=62 Identities=18% Similarity=0.318 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhccCCCCcccCchhHHHhhc-CChHHHHHHHHHHHhhhhccccchhhHHHHh
Q 014877 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADK-MQGPLRQIFVEFLERSCTAEFSGFLLYKELG 161 (416)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~-l~~e~R~~FidFLerScTaEFSGflLYKEl~ 161 (416)
++|++.+...|+. .|+.-.+--+||...+.. .+......+++-+-+.+-..=+|.|-|.|..
T Consensus 63 ~~ei~~l~~~F~~-~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~ 125 (229)
T 3dd4_A 63 KKELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFI 125 (229)
T ss_dssp HHHHHHHHHHHHT-TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHh-hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHH
Confidence 3455555555533 233334444555444433 2222333344444444444445555555443
No 164
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=27.30 E-value=8.7 Score=30.30 Aligned_cols=22 Identities=23% Similarity=0.608 Sum_probs=18.4
Q ss_pred HHhhhhhhccch-hHHhhcCCCh
Q 014877 298 YVTMYLNDCQRT-AFYEGIGLDT 319 (416)
Q Consensus 298 faTMyl~D~~R~-~Fy~alGld~ 319 (416)
|+|.+|+|.+|+ +||+.||...
T Consensus 12 ~V~L~V~Dl~~s~~FY~~lg~~~ 34 (149)
T 4gym_A 12 FVNLPVADVAASQAFFGTLGFEF 34 (149)
T ss_dssp EEEEEESCHHHHHHHHHHTTCEE
T ss_pred EEEEEeCCHHHHHHHHHHhCCCc
Confidence 688999999986 7999998643
No 165
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=27.21 E-value=82 Score=26.04 Aligned_cols=82 Identities=12% Similarity=0.237 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------CccHHHH
Q 014877 101 EFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------NPVVAEI 174 (416)
Q Consensus 101 E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~------NP~lae~ 174 (416)
+|..+...| |.|+.-.+--+||...+..+....-..-+.-|.+.+ +|.|-|.|...-+... ...+.++
T Consensus 58 ~l~~~F~~~--D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 3dtp_E 58 EFKEAFQLI--DQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNA 131 (196)
T ss_dssp HHHHHHHHH--CCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHH
T ss_pred HHHHHHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 444444444 556666666667766555442211112222233333 8988888876544321 2468888
Q ss_pred hhccccchhhhhhhhhh
Q 014877 175 FSLMSRDEARHAGFLNK 191 (416)
Q Consensus 175 F~lMaRDEARHAGFlNk 191 (416)
|..+-+| +-|+|+.
T Consensus 132 F~~~D~d---~~G~Is~ 145 (196)
T 3dtp_E 132 FNLFDEG---DGKCKEE 145 (196)
T ss_dssp HHTTCSS---SSCCBHH
T ss_pred HHHHCCC---CCCcCcH
Confidence 9887665 4566654
No 166
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=27.19 E-value=69 Score=28.34 Aligned_cols=135 Identities=14% Similarity=0.192 Sum_probs=107.2
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCcccccc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFK 215 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF~ 215 (416)
+..++-|-+=...|+.-.-.|--+++-.++. -|-+++.|.-.|-+|-.||--|=+-+.+.|-.++|+-+.+- .-.|=.
T Consensus 9 ~~v~~~LN~qi~~El~As~~Yl~~a~~f~~~~l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p-~~~~~s 87 (189)
T 3uno_A 9 TKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV-RNQFDR 87 (189)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC-CCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCC-CccchH
Confidence 4577888888889998888888888766544 58899999999999999999988999999999999888776 344556
Q ss_pred chhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHHh
Q 014877 216 PKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMK 275 (416)
Q Consensus 216 PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalmr 275 (416)
+.=++=+.+--||.---.|--++..-+++-|.... +|++..-++|-.|-+-+.-++.
T Consensus 88 ~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~---~fLe~fL~EQve~~~~l~~~l~ 144 (189)
T 3uno_A 88 PREALALALDQERTVTDQVGRLTAVARDEGDFLGE---QFMQWFLQEQIEEVALMATLVR 144 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888999888999999998887766554 5555334677778777766554
No 167
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=27.07 E-value=77 Score=26.85 Aligned_cols=87 Identities=23% Similarity=0.353 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhh-ccC--CCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC------cc
Q 014877 100 AEFEALLQEFKT-DYN--QTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN------PV 170 (416)
Q Consensus 100 ~E~~Aml~Efr~-DyN--r~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N------P~ 170 (416)
+|++.+.+-|+. |.| +.-.+--+||...+.. .+......++-+.+.+-..=+|.|-|.|...-+.... ..
T Consensus 45 ~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 123 (226)
T 2zfd_A 45 SEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDK 123 (226)
T ss_dssp HHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHH
Confidence 344444444432 443 6667777777665543 1111112333344444556688888888766554222 24
Q ss_pred HHHHhhccccchhhhhhhhh
Q 014877 171 VAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 171 lae~F~lMaRDEARHAGFlN 190 (416)
+.++|..+-+| +-|+|+
T Consensus 124 l~~~F~~~D~d---~~G~Is 140 (226)
T 2zfd_A 124 IHFSFQLYDLK---QQGFIE 140 (226)
T ss_dssp HHHHHHHHCTT---SSSSEE
T ss_pred HHHHHHHhCCC---CCCccc
Confidence 78888877665 345554
No 168
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=26.88 E-value=1e+02 Score=24.64 Aligned_cols=130 Identities=9% Similarity=0.007 Sum_probs=91.7
Q ss_pred HHHHHhhhhccccchhhHHHHhhhhcccC-ccHHHHhhccccchhhhhhhhhhhhccccccccccc--------ccccCc
Q 014877 140 VEFLERSCTAEFSGFLLYKELGRRLKKTN-PVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGF--------LTKARK 210 (416)
Q Consensus 140 idFLerScTaEFSGflLYKEl~Rrlk~~N-P~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgf--------Ltk~rk 210 (416)
++-|-.-...|++.++-++-..=.++..+ +.+++.|.-.+.+|..||--|-+-+.+.|-..+++. +.....
T Consensus 3 ~~~Ln~~la~e~~~~~~~~~~hw~v~g~~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~ 82 (142)
T 1ji5_A 3 IEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAY 82 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCCCCC
Confidence 45566667778877777776555454443 778999999999999999999999999999988865 555443
Q ss_pred cccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHH
Q 014877 211 YTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (416)
Q Consensus 211 YTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalm 274 (416)
- + .++=++=...=.|+..=.+|=.+...-+..-+..-. .+++...++|-.|-.++.+.+
T Consensus 83 ~-~-~~~e~l~~~l~~e~~~~~~~~~~~~~a~~~~D~~t~---~~l~~~l~e~ek~~w~l~~~l 141 (142)
T 1ji5_A 83 G-E-TAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTS---DLLLGIYTELEKHAWMLRAFL 141 (142)
T ss_dssp T-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred C-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHHHHHhc
Confidence 3 3 777777777777775545555555544555555444 445556777888888877654
No 169
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=26.71 E-value=72 Score=24.94 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=23.4
Q ss_pred cchhhHHHHhhhhcc------cCccHHHHhhccccchhhhhhhhhh
Q 014877 152 SGFLLYKELGRRLKK------TNPVVAEIFSLMSRDEARHAGFLNK 191 (416)
Q Consensus 152 SGflLYKEl~Rrlk~------~NP~lae~F~lMaRDEARHAGFlNk 191 (416)
+|.|-|.|...-+.. ....+.++|..+-+| +-|+|+.
T Consensus 72 dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d---~~G~I~~ 114 (166)
T 2mys_B 72 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPD---GKGSIKK 114 (166)
T ss_pred CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCC---CCcceeH
Confidence 788888877654432 124578888877665 4566554
No 170
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=26.43 E-value=95 Score=23.77 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=50.1
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCC-hHH---HHHHHHHHHhhhhccccchhhHHHHhhhhcccC-
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPL---RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN- 168 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~e~---R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N- 168 (416)
.+.+..++++.++..+ |.|....+-=+||...+.... ... ...-+.-+-+.+-..=+|.|-..|+.+-++...
T Consensus 50 ~~~~~~~~~~~~~~~~--d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~ 127 (162)
T 1top_A 50 GQNPTKEELDAIIEEV--DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE 127 (162)
T ss_dssp TCCCCHHHHHHHHHHH--CTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHHH--cCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC
Confidence 5566778888888877 566666777778865554321 111 222233333444666789999999988775433
Q ss_pred ----ccHHHHhhccc
Q 014877 169 ----PVVAEIFSLMS 179 (416)
Q Consensus 169 ----P~lae~F~lMa 179 (416)
..+.++|..+-
T Consensus 128 ~~~~~~~~~~~~~~d 142 (162)
T 1top_A 128 HVTEEDIEDLMKDSD 142 (162)
T ss_dssp CCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHhC
Confidence 23445555543
No 171
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=25.79 E-value=60 Score=26.19 Aligned_cols=46 Identities=7% Similarity=0.130 Sum_probs=26.4
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHH
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVE 141 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~Fid 141 (416)
......+|+++|+.++ |.|..-.+-=+||...+.....+.++.|--
T Consensus 80 g~~~~~~e~~~l~~~~--D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~ 125 (150)
T 2jjz_A 80 GVPKTHLEMKKMISEV--TGGVSDTISYRDFVNMMLGKRSAVLKLVMM 125 (150)
T ss_dssp TCCCCHHHHHHHHHHH--HTTSCSSBCHHHHHHHHHSSSCCHHHHHHC
T ss_pred CCCCCHHHHHHHHHHH--CCCCCCcEeHHHHHHHHHHhHHHHHHHHHH
Confidence 3344556677777665 444444555566766665555556666543
No 172
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=25.46 E-value=49 Score=26.19 Aligned_cols=56 Identities=14% Similarity=0.234 Sum_probs=37.9
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~ 167 (416)
|.|+.-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-+...
T Consensus 94 D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 94 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp CTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 77888888888888777655433333345555566666778999999988877543
No 173
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=25.12 E-value=1.5e+02 Score=26.01 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=104.5
Q ss_pred HhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc---cCccHHHHhhccccchhhhhhhhhhhhccccccc---
Q 014877 127 AADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK---TNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL--- 200 (416)
Q Consensus 127 ~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~---~NP~lae~F~lMaRDEARHAGFlNkal~Df~l~l--- 200 (416)
.|.++++ ..++-|-+=...|+...-+|=-+++-..+ .-|-++..|.-.|-+|-.||-=|=+-+.+-|-.+
T Consensus 13 ~~~~~~~----~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~ 88 (191)
T 1z6o_M 13 DWITMHR----SCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDV 88 (191)
T ss_dssp TTCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCC
T ss_pred HhhcCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchh
Confidence 3445554 35677777779999999999999988865 2489999999999999999988888888888888
Q ss_pred -ccccccccCccccccchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHh
Q 014877 201 -DLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFEN 258 (416)
Q Consensus 201 -DLgfLtk~rkYTfF~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~ 258 (416)
.|+-+.+-..-.|=.|.=++=+.+=-||--=.+|-.++..=+++.++.=+.+..|+|.
T Consensus 89 ~~l~~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~a~~~~D~~d~~~~d~Le~ 147 (191)
T 1z6o_M 89 SSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYHLVDYLTG 147 (191)
T ss_dssp GGGCCCCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHH
T ss_pred hhhhcCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHH
Confidence 7777766544445577788888888999999999999999999988888888888765
No 174
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=25.05 E-value=42 Score=32.72 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=40.0
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc
Q 014877 137 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD 195 (416)
Q Consensus 137 ~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D 195 (416)
+.++-++.-.|.+|=+-=-+-+++.+- ..-.|.+.++...=.+|||||.+|--..++.
T Consensus 183 ~~~l~~~a~~lvaEeiid~~~r~~~~D-~~vQP~vR~v~riHv~DEaRH~~fare~~~~ 240 (336)
T 3chh_A 183 ERDIAVLVWGAVAETCINALLALLARD-ATIQPMHSLITTLHLRDETAHGSIVVEVVRE 240 (336)
T ss_dssp HHHHHHHHHHHHHHHSBCHHHHHHHTC-SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555566666555555555543 2237999999999999999999998775544
No 175
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=25.00 E-value=72 Score=24.53 Aligned_cols=77 Identities=9% Similarity=0.178 Sum_probs=44.9
Q ss_pred ccCC-CCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---------CccHHHHhhccccc
Q 014877 112 DYNQ-THFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---------NPVVAEIFSLMSRD 181 (416)
Q Consensus 112 DyNr-~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~---------NP~lae~F~lMaRD 181 (416)
|.|. .-.+--+||......+....-..-++-+.+.+-..=+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 28 D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 107 (161)
T 1dtl_A 28 VLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKN 107 (161)
T ss_dssp TTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTT
T ss_pred cCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCC
Confidence 6666 6666667776665544322222334555566666778888888876544322 23477788776554
Q ss_pred hhhhhhhhhh
Q 014877 182 EARHAGFLNK 191 (416)
Q Consensus 182 EARHAGFlNk 191 (416)
+-|+|+.
T Consensus 108 ---~~G~i~~ 114 (161)
T 1dtl_A 108 ---ADGYIDL 114 (161)
T ss_dssp ---CSSEEEH
T ss_pred ---CCCcCcH
Confidence 3455543
No 176
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=24.90 E-value=94 Score=24.10 Aligned_cols=87 Identities=18% Similarity=0.294 Sum_probs=53.1
Q ss_pred HHHHHHHHHh-hccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCccHHHH
Q 014877 101 EFEALLQEFK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVAEI 174 (416)
Q Consensus 101 E~~Aml~Efr-~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~-----~NP~lae~ 174 (416)
+++.+.+-|+ -|.|..-.+--+||......+....-..-++-+.+.+-..-+|.|-|.|...-+.. ....+.++
T Consensus 25 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~ 104 (166)
T 2aao_A 25 EIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAA 104 (166)
T ss_dssp HHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHH
Confidence 4444444443 37777778888888777665533322334566666677777888888887654422 23467788
Q ss_pred hhccccchhhhhhhhh
Q 014877 175 FSLMSRDEARHAGFLN 190 (416)
Q Consensus 175 F~lMaRDEARHAGFlN 190 (416)
|..+-+| +-|+|+
T Consensus 105 F~~~D~d---~~G~i~ 117 (166)
T 2aao_A 105 FTYFDKD---GSGYIT 117 (166)
T ss_dssp HHHHCTT---CSSSBC
T ss_pred HHHhCCC---CCCcCc
Confidence 8876554 345554
No 177
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=24.80 E-value=44 Score=25.67 Aligned_cols=82 Identities=18% Similarity=0.327 Sum_probs=55.4
Q ss_pred cCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc
Q 014877 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK 166 (416)
Q Consensus 93 id~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~ 166 (416)
+.+.+..++++.++..+ |.|..-.+-=+||...+... ..+.+..| +.+-..=+|+|-..|+.+=++.
T Consensus 52 ~~~~~~~~~~~~l~~~~--d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F-----~~~D~d~~G~i~~~el~~~l~~ 124 (161)
T 3fwb_A 52 LGFELPKREILDLIDEY--DSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAF-----QLFDDDHTGKISIKNLRRVAKE 124 (161)
T ss_dssp TTCCCCHHHHHHHHHHH--CTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHH-----HHHCTTCSSEECHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHh--CcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHH-----HHHcCCCCCeEeHHHHHHHHHH
Confidence 46777888999999887 55555567777886655432 22334444 4446677899999998886653
Q ss_pred -----cCccHHHHhhccccc
Q 014877 167 -----TNPVVAEIFSLMSRD 181 (416)
Q Consensus 167 -----~NP~lae~F~lMaRD 181 (416)
....+.++|..+..|
T Consensus 125 ~~~~~~~~~~~~~~~~~d~~ 144 (161)
T 3fwb_A 125 LGETLTDEELRAMIEEFDLD 144 (161)
T ss_dssp TTCCCCHHHHHHHHHTTCSS
T ss_pred hCCCCCHHHHHHHHHHhCCC
Confidence 234678888887666
No 178
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=24.57 E-value=1.4e+02 Score=24.49 Aligned_cols=68 Identities=12% Similarity=0.100 Sum_probs=40.3
Q ss_pred cccHHHHHHHH-------HHHhhccCCCCcccCchhHHHhh---------cC--ChHHHHHHHHHHHhhhhccccchhhH
Q 014877 96 KLNQAEFEALL-------QEFKTDYNQTHFVRNKEFKEAAD---------KM--QGPLRQIFVEFLERSCTAEFSGFLLY 157 (416)
Q Consensus 96 s~~r~E~~Aml-------~Efr~DyNr~HFvR~~eF~~~~d---------~l--~~e~R~~FidFLerScTaEFSGflLY 157 (416)
.+..++++.|+ .. .|.|..-.+-=+||...+. .+ +++..+..+.-+-+.+-..=+|+|-.
T Consensus 70 ~~~~~~~~~l~~~~~~lf~~--~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~ 147 (208)
T 2hpk_A 70 NATDEQVEKMRDAVRVFFLH--KGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDV 147 (208)
T ss_dssp CCCHHHHHHHHHHHHHHHHH--TTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCH
T ss_pred CCCHHHHHHHHHHHHHHHHH--hCCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCH
Confidence 44456666666 43 3556666677778866553 22 33334443444445556677888888
Q ss_pred HHHhhhhc
Q 014877 158 KELGRRLK 165 (416)
Q Consensus 158 KEl~Rrlk 165 (416)
.|+.+=++
T Consensus 148 ~El~~~l~ 155 (208)
T 2hpk_A 148 DELKTMMK 155 (208)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877664
No 179
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=24.39 E-value=39 Score=25.87 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=45.6
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhcc--ccchhhHHHHhhhhccc--------CccHHHHhhccccc
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAE--FSGFLLYKELGRRLKKT--------NPVVAEIFSLMSRD 181 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaE--FSGflLYKEl~Rrlk~~--------NP~lae~F~lMaRD 181 (416)
|.|+.-.+--+||...+..+....-..-++-|.+.+-.. =+|.|-|.|...-+... ...+.++|..+-+|
T Consensus 20 D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d 99 (151)
T 1w7j_B 20 DRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKE 99 (151)
T ss_dssp CCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTT
T ss_pred CCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCC
Confidence 667777777778876665542222233455555666555 67888888776554332 24577788877655
Q ss_pred hhhhhhhhh
Q 014877 182 EARHAGFLN 190 (416)
Q Consensus 182 EARHAGFlN 190 (416)
+-|+|+
T Consensus 100 ---~~G~I~ 105 (151)
T 1w7j_B 100 ---GNGKVM 105 (151)
T ss_dssp ---SSSEEE
T ss_pred ---CCCcCc
Confidence 456554
No 180
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=24.35 E-value=1e+02 Score=31.59 Aligned_cols=66 Identities=18% Similarity=0.326 Sum_probs=41.0
Q ss_pred cCccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC------ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhc
Q 014877 93 INKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM------QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLK 165 (416)
Q Consensus 93 id~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l------~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk 165 (416)
+.+.+.++|++.|++++ |.|..-.+-=+||...+... ..+.++.|--| -.+=+|+|-..||.+=++
T Consensus 331 LG~~~TeeEI~~Lf~~~--D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~f-----DkDgdG~IS~eELr~vL~ 402 (440)
T 3u0k_A 331 LGQNPTEAELQDMINEV--DADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF-----DKDGNGYISAAELRHVMT 402 (440)
T ss_dssp TTCCCCHHHHHHHHHHH--CSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHH-----CTTCSSEECHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHh--CCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH-----CCCCcCcCCHHHHHHHHH
Confidence 35666777888888876 44555555556775444321 34566666543 456678888888876553
No 181
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=24.12 E-value=34 Score=28.09 Aligned_cols=15 Identities=13% Similarity=0.069 Sum_probs=7.5
Q ss_pred cccchhhHHHHhhhh
Q 014877 150 EFSGFLLYKELGRRL 164 (416)
Q Consensus 150 EFSGflLYKEl~Rrl 164 (416)
.=+|.|-+.|+.+-+
T Consensus 119 d~~G~I~~~E~~~~l 133 (207)
T 2d8n_A 119 DGNGTISKNEVLEIV 133 (207)
T ss_dssp TCSSEECHHHHHHHH
T ss_pred CCCCeEcHHHHHHHH
Confidence 345555555555433
No 182
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=23.51 E-value=57 Score=22.85 Aligned_cols=67 Identities=22% Similarity=0.250 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCC-hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 014877 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ-GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (416)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~-~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~ 167 (416)
.++++. +...| |.|..-++--+||...+..+. ...-..-++-+.+.+-..=+|.|-|.|..+-++..
T Consensus 7 ~~~~l~-~F~~~--D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 7 EEEILR-AFKVF--DANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp CHHHHH-HHHHH--SCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred HHHHHH-HHHHH--CCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 345566 55555 666666677777766665553 22222334444455555567888888777666433
No 183
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=23.09 E-value=1.2e+02 Score=22.82 Aligned_cols=69 Identities=7% Similarity=0.042 Sum_probs=36.7
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhh---hccccchhhHHHHhhhhccc--------CccHHHHhhcccc
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC---TAEFSGFLLYKELGRRLKKT--------NPVVAEIFSLMSR 180 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerSc---TaEFSGflLYKEl~Rrlk~~--------NP~lae~F~lMaR 180 (416)
|.|+.-.+--+||...+..+....-..-++-|.+.+ -..= |.|-|.|...-+... ...+.++|..+-+
T Consensus 18 D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 96 (149)
T 2mys_C 18 DRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDK 96 (149)
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCC
Confidence 666666666677765554432211122233344444 3333 778887776555332 2456777877655
Q ss_pred c
Q 014877 181 D 181 (416)
Q Consensus 181 D 181 (416)
|
T Consensus 97 d 97 (149)
T 2mys_C 97 E 97 (149)
T ss_pred C
Confidence 4
No 184
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=23.07 E-value=1.2e+02 Score=24.83 Aligned_cols=94 Identities=16% Similarity=0.160 Sum_probs=60.6
Q ss_pred ccHHHHHHHHHH-------Hh-hccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccC
Q 014877 97 LNQAEFEALLQE-------FK-TDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTN 168 (416)
Q Consensus 97 ~~r~E~~Aml~E-------fr-~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~N 168 (416)
...+||.+++.. |+ -|.|+.-++--+||......+....-..-++-+.+.+-.-=+|.|-|.|..+-+. ..
T Consensus 80 I~~~EF~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~-~~ 158 (191)
T 1y1x_A 80 ITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI-FV 158 (191)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH-HH
T ss_pred EcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-HH
Confidence 456677665532 21 2788888888899988776653322233344445555556689999999988775 34
Q ss_pred ccHHHHhhccccchhhhhhhhhhhhc
Q 014877 169 PVVAEIFSLMSRDEARHAGFLNKGLS 194 (416)
Q Consensus 169 P~lae~F~lMaRDEARHAGFlNkal~ 194 (416)
+.+.++|..+-+| +-|.|.-...
T Consensus 159 ~~~~~~F~~~D~d---~dG~i~~~~~ 181 (191)
T 1y1x_A 159 CRVRNVFAFYDRE---RTGQVTFTFD 181 (191)
T ss_dssp HHHHHHHHHHCTT---CCSEEEEEHH
T ss_pred HHHHHHHHHhCcC---CCceEEeeHH
Confidence 7888888887655 3455544333
No 185
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=23.05 E-value=62 Score=25.44 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=0.0
Q ss_pred cccHHHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCcc----
Q 014877 96 KLNQAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPV---- 170 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~---- 170 (416)
+..++|++.+-+-|+. |.|+.-.+--+||...+..+.......-+.-+.+.+...-+|.+-|.|....+....+.
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 82 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE 82 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Q ss_pred --HHHHhhccccc
Q 014877 171 --VAEIFSLMSRD 181 (416)
Q Consensus 171 --lae~F~lMaRD 181 (416)
|.++|..+-+|
T Consensus 83 ~~l~~aF~~~D~d 95 (148)
T 2lmt_A 83 EEMREAFKIFDRD 95 (148)
T ss_dssp HHHHHHHHHHHSS
T ss_pred HHHHHHHHHHCCC
No 186
>3dka_A DINB-like protein; DINB/YFIT-like putative metalloenzyme fold, structural genom joint center for structural genomics, JCSG; 2.30A {Bacillus subtilis}
Probab=22.94 E-value=59 Score=25.69 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=28.3
Q ss_pred CccHHHHhhccccchhhhhhhhhhhhccccccc
Q 014877 168 NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYAL 200 (416)
Q Consensus 168 NP~lae~F~lMaRDEARHAGFlNkal~Df~l~l 200 (416)
.--+.++...+.-.|+.|.|=|.-.|+..|+..
T Consensus 115 ~~t~~~~l~~~~~H~~hH~GQi~~~lr~~g~~~ 147 (155)
T 3dka_A 115 KVTGRALLQLAMEHEIHHKGNLFVYVREMGHTE 147 (155)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccHHHHHHHHHhHHHHhHHHHHHHHHHcCCCC
Confidence 346778888889999999999999999998864
No 187
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=22.75 E-value=1.2e+02 Score=23.76 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=24.1
Q ss_pred HHHHHHhhhhccccchhhHHHHhhhhccc---CccHHHHhhcccc
Q 014877 139 FVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIFSLMSR 180 (416)
Q Consensus 139 FidFLerScTaEFSGflLYKEl~Rrlk~~---NP~lae~F~lMaR 180 (416)
.+.-+-+.+-..=+|.|-+.|+.+=++.- ...+.++|..+-.
T Consensus 106 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~ 150 (185)
T 2sas_A 106 RIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITD 150 (185)
T ss_dssp HHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcC
Confidence 33444445556667888888887766432 3445555554433
No 188
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=22.62 E-value=1.3e+02 Score=22.14 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=47.0
Q ss_pred CccccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC---ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---
Q 014877 94 NKKLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM---QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT--- 167 (416)
Q Consensus 94 d~s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l---~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~--- 167 (416)
...+..+|++.|++++ | ..-.+-=+||...+... ..+.++.|--| -..=+|+|-..|+.+=++.-
T Consensus 4 ~~~~~~~ei~~~~~~~--D--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~i~~~el~~~l~~~~~~ 74 (109)
T 3fs7_A 4 TDILSAKDIESALSSC--Q--AADSFNYKSFFSTVGLSSKTPDQIKKVFGIL-----DQDKSGFIEEEELQLFLKNFSSS 74 (109)
T ss_dssp GGTSCHHHHHHHHHHT--C--STTCCCHHHHHHHHTCTTCCHHHHHHHHHHH-----STTCSSSBCHHHHHTTGGGTCTT
T ss_pred cCcCCHHHHHHHHHhc--C--CCCcCcHHHHHHHHhcCCCcHHHHHHHHHHH-----CCCCCCeEeHHHHHHHHHHHhcc
Confidence 3445677888888887 3 22334446776655421 23345555443 55667888888888766543
Q ss_pred -----CccHHHHhhccccc
Q 014877 168 -----NPVVAEIFSLMSRD 181 (416)
Q Consensus 168 -----NP~lae~F~lMaRD 181 (416)
...+.++|..+-.|
T Consensus 75 ~~~~~~~~~~~~~~~~D~~ 93 (109)
T 3fs7_A 75 ARVLTSAETKAFLAAGDTD 93 (109)
T ss_dssp SCCCCHHHHHHHHHHHCTT
T ss_pred cccCCHHHHHHHHHHhCCC
Confidence 23566777766554
No 189
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=22.10 E-value=75 Score=28.57 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhh
Q 014877 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERS 146 (416)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerS 146 (416)
.+++++++.+.++.-|.+ -...+.-++..++++.+.-+.|+|||++|
T Consensus 207 ~~~~~~~l~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 253 (266)
T 3r0s_A 207 DKDEVDRLSRAFKTLFRQ--GDLKENAKNLLENQESENVKKMCHFILET 253 (266)
T ss_dssp CHHHHHHHHHHHHHHHSS--SCHHHHHHHHHTTCCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHcc--CcHHHHHHHHHhhcCCHHHHHHHHHHHhc
Confidence 456788888888777654 22222233333333445677899999866
No 190
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=21.68 E-value=55 Score=24.74 Aligned_cols=39 Identities=10% Similarity=0.232 Sum_probs=18.8
Q ss_pred HHhhhhccccchhhHHHHhhhhcc------cCccHHHHhhccccc
Q 014877 143 LERSCTAEFSGFLLYKELGRRLKK------TNPVVAEIFSLMSRD 181 (416)
Q Consensus 143 LerScTaEFSGflLYKEl~Rrlk~------~NP~lae~F~lMaRD 181 (416)
|.+.+-..=+|.|-|.|...-+.. ....+.++|..+-+|
T Consensus 47 l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d 91 (142)
T 2bl0_C 47 MFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPE 91 (142)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCS
T ss_pred HHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCC
Confidence 334444444566666555443321 123456666655444
No 191
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=21.29 E-value=86 Score=22.01 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhh
Q 014877 100 AEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRR 163 (416)
Q Consensus 100 ~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rr 163 (416)
++.+.+.+-|+. |.|+.-++--+||...+..+....-..-++-+.+.+-..=+|.|-|.|..+-
T Consensus 11 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~ 75 (85)
T 2ktg_A 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTI 75 (85)
T ss_dssp HHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 344444444432 7777777877888777765533333334455555666666788888776543
No 192
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=21.27 E-value=1.4e+02 Score=21.81 Aligned_cols=75 Identities=19% Similarity=0.224 Sum_probs=40.7
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccCchhHHHhhc---CChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc------
Q 014877 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADK---MQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT------ 167 (416)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~---l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~------ 167 (416)
+.++|++.|++++- ....+-=+||...+.. -..+.++.|-.| -..=+|.|-..|+.+=++.-
T Consensus 6 ~~~~e~~~l~~~~d----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~-----D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 2pvb_A 6 LKDADVAAALAACS----AADSFKHKEFFAKVGLASKSLDDVKKAFYVI-----DQDKSGFIEEDELKLFLQNFSPSARA 76 (108)
T ss_dssp SCHHHHHHHHHHTC----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHH-----CTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred CCHHHHHHHHHHhC----CCCcCcHHHHHHHHhCChhHHHHHHHHHHHH-----CCCCCCcCCHHHHHHHHHHHhccCCC
Confidence 45667777777653 1223444566554431 122345555433 45567888888887766532
Q ss_pred --CccHHHHhhcccc
Q 014877 168 --NPVVAEIFSLMSR 180 (416)
Q Consensus 168 --NP~lae~F~lMaR 180 (416)
...+.++|..+-.
T Consensus 77 ~~~~~~~~~~~~~D~ 91 (108)
T 2pvb_A 77 LTDAETKAFLADGDK 91 (108)
T ss_dssp CCHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHhCC
Confidence 1245556655543
No 193
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=21.17 E-value=67 Score=26.78 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhh-ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCccHH
Q 014877 99 QAEFEALLQEFKT-DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPVVA 172 (416)
Q Consensus 99 r~E~~Aml~Efr~-DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~-----~NP~la 172 (416)
.+|.+.+.+-|+. |.|+.-.+--+||......+....-...++-|.+.+-..-+|.|-|.|...-+.. ....+.
T Consensus 53 ~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~ 132 (197)
T 3pm8_A 53 DVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCL 132 (197)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHH
Confidence 3455555555543 7777777777788776665544444455666666666667888888887554321 123567
Q ss_pred HHhhccccchhhhhhhhh
Q 014877 173 EIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 173 e~F~lMaRDEARHAGFlN 190 (416)
++|..+-.| +-|+|.
T Consensus 133 ~~F~~~D~d---~~G~Is 147 (197)
T 3pm8_A 133 IPFKFFDID---GNGKIS 147 (197)
T ss_dssp HHHHHHCTT---CSSEEC
T ss_pred HHHHHHCCC---CCCCCC
Confidence 778776554 345554
No 194
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=21.16 E-value=87 Score=25.36 Aligned_cols=75 Identities=15% Similarity=0.228 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCC----hHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---CccHH
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQ----GPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVA 172 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~----~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~---NP~la 172 (416)
++++.++..+ |.|..-.+-=+||...+..+. .+.++.|-. +-..=+|+|-..|+.+=++.. ..++.
T Consensus 73 ~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F~~-----~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 145 (180)
T 3mse_B 73 WDINRILQAL--DINDRGNITYTEFMAGCYRWKNIESTFLKAAFNK-----IDKDEDGYISKSDIVSLVHDKVLDNNDID 145 (180)
T ss_dssp HHHHHHHHHH--CTTCCSEECHHHHHHHHSCCTTC--CHHHHHHHH-----HCTTCSSCBCHHHHHHHTTTSSCCHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCcHHHHHHHHHhcccCCHHHHHHHHHH-----HCCCCCCCCCHHHHHHHHcCCCCCHHHHH
Confidence 4555555554 444444555566655554432 234444433 345567777777777766522 23355
Q ss_pred HHhhccccc
Q 014877 173 EIFSLMSRD 181 (416)
Q Consensus 173 e~F~lMaRD 181 (416)
++|..+-.|
T Consensus 146 ~~~~~~d~~ 154 (180)
T 3mse_B 146 NFFLSVHSI 154 (180)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhhhc
Confidence 555555444
No 195
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=21.14 E-value=89 Score=24.22 Aligned_cols=53 Identities=11% Similarity=0.268 Sum_probs=22.8
Q ss_pred ccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhh--hccccchhhHHHHhhhh
Q 014877 112 DYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSC--TAEFSGFLLYKELGRRL 164 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerSc--TaEFSGflLYKEl~Rrl 164 (416)
|.|+.-++--+||...+..+....-..=++-+.+.| -..=+|.|-|.|..+-+
T Consensus 95 D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 149 (159)
T 2ovk_C 95 DREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKV 149 (159)
T ss_dssp CTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHH
Confidence 444445555555555444332211122223333322 23335566666655544
No 196
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=21.00 E-value=82 Score=29.80 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc---CccHHHHh
Q 014877 99 QAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT---NPVVAEIF 175 (416)
Q Consensus 99 r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~---NP~lae~F 175 (416)
+++++.+++++ |.|..-.+--+||...+.........+-+.-+-+.+-..=+|.+-..|+.+=++.. ..++.++|
T Consensus 381 ~~~~~~~~~~~--D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~ 458 (484)
T 3nyv_A 381 EHEVDQVLDAV--DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVL 458 (484)
T ss_dssp HHHHHHHHHHH--TCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHH
Confidence 44555555555 56666667777886655443322222333334444566778899888888766431 22345555
Q ss_pred hccc
Q 014877 176 SLMS 179 (416)
Q Consensus 176 ~lMa 179 (416)
.-+-
T Consensus 459 ~~~D 462 (484)
T 3nyv_A 459 SEVD 462 (484)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 5443
No 197
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=20.80 E-value=24 Score=29.52 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhccc
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKT 167 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~ 167 (416)
++++.|+..+ |.|..-.+-=+||...+..+.......-+..+-+.+-..=+|+|-..|+.+=++..
T Consensus 93 ~~~~~l~~~~--D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 93 PDIHQVLRDI--DSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HHHHHHHHC---------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HHHHHHHHHh--CCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 3444444443 33333344445554443332211122222333344566778999999999877643
No 198
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=20.71 E-value=88 Score=26.56 Aligned_cols=135 Identities=12% Similarity=0.096 Sum_probs=94.2
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhhhhccc-CccHHHHhhccccchhhhhhhhhhhhcccccccccccccccCccccc
Q 014877 136 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKT-NPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFF 214 (416)
Q Consensus 136 R~~FidFLerScTaEFSGflLYKEl~Rrlk~~-NP~lae~F~lMaRDEARHAGFlNkal~Df~l~lDLgfLtk~rkYTfF 214 (416)
++..++-|-+-...|+...-+|--++.-.++. -|.+++.|.-.|-+|..||--|=+-+.+.|-.+.++-+.+-+ -.|-
T Consensus 17 ~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~~~~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~-~~~~ 95 (176)
T 1vlg_A 17 SEKVRKALNDQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPP-SNWN 95 (176)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC-CCCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCC-CCCC
Confidence 44577888888888888877887777766544 488999999999999999999999999999998887776653 2344
Q ss_pred cchhhhhhhhcccccchhhHHHHHHHhhhCCCCcccchhhhhHhhhhhcccchhHHHHHH
Q 014877 215 KPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALM 274 (416)
Q Consensus 215 ~PkfIfYAtYLSEKIGYwRYItIyRHLe~~Pe~r~~PIFk~FE~WCqDEnRHGDfFaalm 274 (416)
.+.=++=+..=.||.--.+|-.+...-++.-+. ..-.+|+..-+++-.|...+..++
T Consensus 96 ~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~---~t~~~l~~~l~eq~ee~~~l~~~l 152 (176)
T 1vlg_A 96 GIKDAFEAALKHEEFVTQSIYNILELASEEKDH---ATVSFLKWFVDEQVEEEDQVREIL 152 (176)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666666777666666666666665443 444555545555444444444443
No 199
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=20.65 E-value=1.3e+02 Score=28.24 Aligned_cols=97 Identities=16% Similarity=0.140 Sum_probs=65.9
Q ss_pred ccHHHH---HHHHHHHhhccCCCCcccCchh-HHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHH
Q 014877 97 LNQAEF---EALLQEFKTDYNQTHFVRNKEF-KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVA 172 (416)
Q Consensus 97 ~~r~E~---~Aml~Efr~DyNr~HFvR~~eF-~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~la 172 (416)
..+||+ +.+++-|++-.-.--=.+.+.+ .+...++....-..+||=|.=+--=|--+|==|+=|+-.+. -+ |+
T Consensus 66 LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k~vr~~ep~~l~D~Llv~AlIEARSCERF~lLa~~l~--d~-L~ 142 (206)
T 2itb_A 66 LAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRLVRAHEPVKLVDTLVVGAFIEARSCERFAALVPHLD--EE-LG 142 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHTTSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHGGGSC--HH-HH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhHHHHHHHHhcCc--HH-HH
Confidence 466665 5667777665444333455556 44555665555577888887666666667777888898884 34 99
Q ss_pred HHhhccccchhhhhh-hhhhhhccc
Q 014877 173 EIFSLMSRDEARHAG-FLNKGLSDF 196 (416)
Q Consensus 173 e~F~lMaRDEARHAG-FlNkal~Df 196 (416)
+.+.-+-+.||||-| ||.-|-.-+
T Consensus 143 ~FY~~Ll~SEArHy~~yl~LA~~y~ 167 (206)
T 2itb_A 143 RFYHGLLKSEARHYQGYLKLAHNYG 167 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 999999999999975 555554433
No 200
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=20.47 E-value=79 Score=24.92 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=21.5
Q ss_pred cccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcC
Q 014877 96 KLNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKM 131 (416)
Q Consensus 96 s~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l 131 (416)
....+|++.|+.++ |.|..-.+-=+||...+..+
T Consensus 73 ~~~~~e~~~~~~~~--D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 73 GMSKEDAQGMVREG--DLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp CCCHHHHHHHHHHH--CSSCSSSBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHHh
Confidence 55677888888876 44444445556665555444
No 201
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=20.31 E-value=95 Score=23.12 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChHHHHHHHHHHHhhhhccccchhhHHHHhhhh
Q 014877 98 NQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRL 164 (416)
Q Consensus 98 ~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrl 164 (416)
.++++..+...| |.|+.-++--+||...+..+....-..=++-+.+.+-..=+|.|-|.|...-+
T Consensus 27 ~~~~l~~~F~~~--D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~ 91 (94)
T 2kz2_A 27 SEEEIREAFRVE--DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91 (94)
T ss_dssp CHHHHHHHHHHH--CTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHH--CCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 344555555544 55555555555665444332111111112223333344456777777766544
No 202
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=20.26 E-value=73 Score=28.02 Aligned_cols=65 Identities=14% Similarity=0.222 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccchhhhhhhhhhhhcc-ccccc
Q 014877 134 PLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSD-FNYAL 200 (416)
Q Consensus 134 e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRDEARHAGFlNkal~D-f~l~l 200 (416)
.++..|++-|-.=.-+|-..-=.+..+.+++ .||.|++.|.--..+=-+|..=|...+.. .|...
T Consensus 5 ~l~dlf~~~L~D~y~aE~q~~~al~~~~~~a--~~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~ 70 (166)
T 2gs4_A 5 TIEDVFIHLLSDTYSAEKQLTRALAKLARAT--SNEKLSQAFHAHLEETHGQIERIDQVVESESNLKI 70 (166)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--SCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3578999999999999999999999999999 78999999987666667788888888888 87643
No 203
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=20.04 E-value=1.3e+02 Score=24.49 Aligned_cols=84 Identities=24% Similarity=0.284 Sum_probs=50.1
Q ss_pred ccHHHHHHHHHHHhhccCCCCcccCchhHHHhhcCChH-HHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----cCcc
Q 014877 97 LNQAEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGP-LRQIFVEFLERSCTAEFSGFLLYKELGRRLKK-----TNPV 170 (416)
Q Consensus 97 ~~r~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d~l~~e-~R~~FidFLerScTaEFSGflLYKEl~Rrlk~-----~NP~ 170 (416)
..++|++.+.+.|..|. +.-.+--+||...+..+-+. .-...+.-+-+.+-..=+|.|-+.|+..-+.. ....
T Consensus 30 ~~~~~i~~~f~~~d~~~-~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~ 108 (207)
T 2d8n_A 30 FSEEELCSWYQSFLKDC-PTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQK 108 (207)
T ss_dssp CCHHHHHHHHHHHHHHC-TTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTT
T ss_pred CCHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHH
Confidence 35678888888886652 34556667787766655221 11233444444556667888888887765532 2345
Q ss_pred HHHHhhccccc
Q 014877 171 VAEIFSLMSRD 181 (416)
Q Consensus 171 lae~F~lMaRD 181 (416)
+.++|..+-+|
T Consensus 109 ~~~~f~~~D~d 119 (207)
T 2d8n_A 109 LEWAFSLYDVD 119 (207)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhcCC
Confidence 66777665544
No 204
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=20.01 E-value=1.6e+02 Score=24.60 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=39.4
Q ss_pred ccCCCCcccCchhHHHhhcC----ChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcccCccHHHHhhccccc
Q 014877 112 DYNQTHFVRNKEFKEAADKM----QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRD 181 (416)
Q Consensus 112 DyNr~HFvR~~eF~~~~d~l----~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~~NP~lae~F~lMaRD 181 (416)
| |+.-++--+|+...+..+ ....-..-++-+.+-+. .=+|.|-|.|..+-+. +.+.+.++|..+-+|
T Consensus 86 D-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~-~~~~~~~~F~~~D~d 156 (174)
T 2i7a_A 86 Q-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLM-RLEAMAKTFRNLSKD 156 (174)
T ss_dssp C-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHH-HHHHHHHHHHHHCSS
T ss_pred c-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHH-HHHHHHHHHHHhCCC
Confidence 7 888888888888777666 21111122222333333 3477777777665443 225677778777665
No 205
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=20.01 E-value=2.1e+02 Score=23.77 Aligned_cols=86 Identities=17% Similarity=0.349 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhhccCCCCcccCchhHHHhh--------cCChHHHHHHHHHHHhhhhccccchhhHHHHhhhhcc-----
Q 014877 100 AEFEALLQEFKTDYNQTHFVRNKEFKEAAD--------KMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKK----- 166 (416)
Q Consensus 100 ~E~~Aml~Efr~DyNr~HFvR~~eF~~~~d--------~l~~e~R~~FidFLerScTaEFSGflLYKEl~Rrlk~----- 166 (416)
+++..+...+ |.|+.-++--+||...+. .++++.-+.+++-+.+.+-..=+|.|-|.|...-+..
T Consensus 103 ~~l~~~F~~~--D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~ 180 (263)
T 2f33_A 103 EEFMKTWRKY--DTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 180 (263)
T ss_dssp HHHHHHHTTS--STTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred HHHHHHHHHH--CCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence 4444444433 666777777778866543 3455444456666777777777899999988765532
Q ss_pred --------cCccHHHHhhccccchhhhhhhhh
Q 014877 167 --------TNPVVAEIFSLMSRDEARHAGFLN 190 (416)
Q Consensus 167 --------~NP~lae~F~lMaRDEARHAGFlN 190 (416)
....+.++|..+-+| +-|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~F~~~D~d---~~G~is 209 (263)
T 2f33_A 181 LKFQGIKMCGKEFNKAFELYDQD---GNGYID 209 (263)
T ss_dssp HHHHHTCCCHHHHHHHHHHHCCS---SSSCEE
T ss_pred HHhcCcchHHHHHHHHHHHhCCC---CCCccc
Confidence 124566777766554 345543
No 206
>4g5s_E PINS homolog, G-protein-signaling modulator 2; galpha, goloco, galpha signaling, asymmetric cell division, cycle-signaling protein complex; HET: GDP CIT; 3.62A {Mus musculus}
Probab=20.00 E-value=36 Score=22.66 Aligned_cols=17 Identities=47% Similarity=0.704 Sum_probs=13.1
Q ss_pred hhHHHHHHhhCccchhh
Q 014877 267 GDFFSALMKAQPQFLND 283 (416)
Q Consensus 267 GDfFaalmraqP~ll~g 283 (416)
-|||+.|+|+|-.-+.+
T Consensus 2 d~ff~ml~kcq~srldd 18 (26)
T 4g5s_E 2 EDFFDILVKCQGSRLDD 18 (26)
T ss_dssp -CHHHHHHHHSCCCCSS
T ss_pred hhHHHHHHHhccccccc
Confidence 37999999999766554
Done!