Query 014878
Match_columns 416
No_of_seqs 208 out of 1338
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 09:23:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014878.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014878hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02544 phosphoribosylaminoim 100.0 2E-110 4E-115 838.8 36.7 363 42-408 8-370 (370)
2 PRK12607 phosphoribosylaminoim 100.0 4E-100 9E-105 753.1 34.6 308 96-413 2-312 (313)
3 PRK13961 phosphoribosylaminoim 100.0 1.3E-90 2.8E-95 682.3 30.8 277 99-392 2-296 (296)
4 cd01414 SAICAR_synt_Sc non-met 100.0 3E-88 6.5E-93 661.6 30.7 263 115-388 1-279 (279)
5 PRK13960 phosphoribosylaminoim 100.0 3E-87 6.4E-92 671.6 32.5 300 99-410 5-361 (367)
6 TIGR02735 purC_vibrio phosphor 100.0 3.8E-86 8.2E-91 663.3 31.9 300 100-410 5-360 (365)
7 PRK13959 phosphoribosylaminoim 100.0 3E-81 6.4E-86 624.7 31.1 273 118-406 1-340 (341)
8 COG0152 PurC Phosphoribosylami 100.0 8.2E-74 1.8E-78 549.7 23.6 240 113-388 4-247 (247)
9 PRK09362 phosphoribosylaminoim 100.0 5.5E-73 1.2E-77 543.4 25.4 227 112-387 3-234 (238)
10 cd01415 SAICAR_synt_PurC bacte 100.0 1E-72 2.2E-77 539.1 25.3 224 115-387 1-229 (230)
11 cd00476 SAICAR_synt 5-aminoimi 100.0 4.3E-71 9.3E-76 528.0 26.2 226 115-387 1-230 (230)
12 cd01416 SAICAR_synt_Ade5 Ade5_ 100.0 5.4E-71 1.2E-75 533.0 26.7 234 113-386 4-250 (252)
13 TIGR00081 purC phosphoribosyla 100.0 1.6E-70 3.5E-75 525.9 26.0 229 111-388 4-237 (237)
14 PF01259 SAICAR_synt: SAICAR s 100.0 2.1E-72 4.5E-77 542.1 6.2 224 113-356 1-234 (248)
15 KOG2835 Phosphoribosylamidoimi 100.0 2E-35 4.2E-40 296.5 8.5 297 111-414 10-369 (373)
16 KOG2835 Phosphoribosylamidoimi 98.7 9.5E-10 2.1E-14 111.9 -2.4 138 189-353 93-235 (373)
17 PF01259 SAICAR_synt: SAICAR s 78.3 0.068 1.5E-06 52.6 -6.9 32 228-259 112-143 (248)
18 PF12260 PIP49_C: Protein-kina 48.0 35 0.00075 31.9 5.0 46 268-314 56-105 (188)
19 KOG2270 Serine/threonine prote 42.9 63 0.0014 35.0 6.5 74 223-314 227-307 (520)
20 KOG2269 Serine/threonine prote 29.6 1.3E+02 0.0029 32.2 6.3 36 279-315 391-427 (531)
21 PF13421 Band_7_1: SPFH domain 28.8 1.2E+02 0.0026 29.2 5.5 36 266-301 155-191 (211)
22 COG2187 Uncharacterized protei 28.1 1.9E+02 0.004 30.2 6.9 62 265-326 177-244 (337)
23 COG0478 RIO-like serine/threon 27.8 77 0.0017 32.7 4.1 44 275-330 206-251 (304)
24 PF08491 SE: Squalene epoxidas 26.2 69 0.0015 32.5 3.5 69 291-376 31-106 (276)
25 PF07478 Dala_Dala_lig_C: D-al 25.0 1.4E+02 0.003 28.2 5.2 42 265-314 129-170 (203)
26 PF14398 ATPgrasp_YheCD: YheC/ 24.8 2.5E+02 0.0055 27.6 7.1 53 267-322 184-236 (262)
27 COG1718 RIO1 Serine/threonine 24.4 2.5E+02 0.0053 28.6 6.9 57 279-354 174-231 (268)
28 PRK01736 hypothetical protein; 21.3 2.5E+02 0.0054 26.7 6.0 43 364-406 56-102 (190)
No 1
>PLN02544 phosphoribosylaminoimidazole-succinocarboxamide synthase
Probab=100.00 E-value=2e-110 Score=838.82 Aligned_cols=363 Identities=72% Similarity=1.162 Sum_probs=342.5
Q ss_pred CCCCCCCceeecccccccccccCCcccccccccchhhHHhcccchhhhHHhHHHhhhhcccccccccCCCCCCccccccc
Q 014878 42 SNSNNYPRISLSVMSNKNQNQNQNQNHHHHQQHLSLDAVISSNRKAELLGDIKGSLSNRLSETNLHLTVPGLKSKTRGKV 121 (416)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~l~~~~~~l~~iyeGKv 121 (416)
+....++..++.++.+.+....++. .+++++.+.+.++.++++++.+++++|++||++|+|+.++|+|+++|+|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l~~lyeGKv 83 (370)
T PLN02544 8 PEFMKPASPSSGVGGASGKFRAQQL----PSPALSLDDLSSSGRRPEVLGAIKEALSNCLTETNLDLTVPGLGSRRRGKV 83 (370)
T ss_pred ccccCCccccccccccccccccccC----CCCCccccccccccccHHHHHHHHHHHHhhhhhccccccCCCCcccccccc
Confidence 3334444555555555555555543 577888899999999999999999999999999999888999999999999
Q ss_pred ceeeecCCeEEEEEcCCCCccccccCCCCchhHHHHHHHHHHHHhccCCCCcccccCCCCCeEEEeccceeeeEEEEeee
Q 014878 122 RDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGF 201 (416)
Q Consensus 122 KdVY~~~d~ll~v~kDriSAFD~~~~~IpgKG~vln~iS~~~Fe~L~~gIptHfV~~~~~~~~ivkk~~mIPlEvIVRny 201 (416)
|+||+.+|.++|+||||+||||+++++|||||++||+||+|||+++++|||||||+.+++++|+||||+|||||||||||
T Consensus 84 KdvY~~~d~ll~vfkDriSAFD~~~~~IpgKG~vln~iS~~wF~~l~~~IptH~i~~~~~~~mlVkk~~~iPlEvVvR~y 163 (370)
T PLN02544 84 RDIYDLGDYLVLVTTDRQSAFDRVLASIPFKGQVLNQTSAWWFNNTKHITPNALVSSPDPNVTIAKKCSVFPVEFVVRGY 163 (370)
T ss_pred ceEEecCCeEEEEEeCCcccccccCCCCCChhHHHHHHHHHHHHHhhCcCCcceeccCCCceEEEEEeeeeeEEEEEEee
Confidence 99999988999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCCCCCCCCHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 014878 202 VTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAEDHDVPVTPDEIVKLGLMTEAEFDEASRKALRLF 281 (416)
Q Consensus 202 atGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~hD~~Is~e~~~~lglv~~ee~~~I~~~al~I~ 281 (416)
+|||++||+|++|++|.+++||+.||+|+++|++|++|||||+||+|+||++||+++++++|+++++++++|+++|++||
T Consensus 164 ~tGS~~~slw~~Y~~g~~~~~Gi~lpeGl~eg~kLp~PI~tpstK~d~hD~~Is~~~i~~~g~~~~ee~~~i~~~alki~ 243 (370)
T PLN02544 164 MTGSTSTSLWTVYNKGVRNYCGNDLPDGMVKNQKLPANILTPTTKAADHDVPISPEEIVEEGLMTQEDFDEVSSKALALF 243 (370)
T ss_pred eeccchHHHHHHHhccCcccccccCCCCccccCCCCCCeEEEeeccccCCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHHHHHHHhcCCCCCC
Q 014878 282 EYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRLWFKDHCNPYED 361 (416)
Q Consensus 282 ~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R~wl~~~~~~~~~ 361 (416)
++++++|+++||+|||||||||++.+|+|+|+|||+|||||||||+++|++||++|++|++|||||||+||++++.+|++
T Consensus 244 ~~l~~~~~~~GiiLvD~K~EFG~d~~G~IvL~DEI~TPDSsR~Wd~~tye~~~~~G~~~~s~DKq~vR~wl~~~~~~~~~ 323 (370)
T PLN02544 244 AFGQEVAAEHGLILVDTKYEFGKDADGTILLIDEVHTPDSSRYWLADSYEERHAAGLEPENIDKEFLRLWFKENCDPYKD 323 (370)
T ss_pred HHHHHHHHHCCCeEEEeeEEeeECCCCcEEEEEeccCCCceeeeecCCccccccCCCCCCCcChHHHHHHHHccCccccC
Confidence 99999999999999999999999989999999999999999999999999999999999999999999999988777888
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcCHHHHHHHHH
Q 014878 362 EVLPDAPEELICELAWRYIFLYEAITKSRFDVSSTKEPIHDRISRNV 408 (416)
Q Consensus 362 ~~~P~LP~evv~~~s~rY~~~~e~iTG~~~~~~~~~~~~~~ri~~n~ 408 (416)
+++|+||+|+|++|++||+++||+|||++|+.|+..+++++||++||
T Consensus 324 ~~~P~lP~evv~~ts~rY~~~ye~iTG~~f~~~~~~~~~~~ri~~~~ 370 (370)
T PLN02544 324 EVLPEAPAELVCELSWRYIKLYETITGEKFEVPDTQEPIHERISRNV 370 (370)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhCCCcCCCCCCCCHHHHHHhcC
Confidence 88999999999999999999999999999999988999999999986
No 2
>PRK12607 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
Probab=100.00 E-value=4.3e-100 Score=753.15 Aligned_cols=308 Identities=53% Similarity=0.916 Sum_probs=293.3
Q ss_pred hhhhcccccccccCCCCCCcccccccceeeecCC-eEEEEEcCCCCccccccCCCCchhHHHHHHHHHHHHhccCCCCcc
Q 014878 96 SLSNRLSETNLHLTVPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNA 174 (416)
Q Consensus 96 ~~~~~l~~t~l~~~~~~l~~iyeGKvKdVY~~~d-~ll~v~kDriSAFD~~~~~IpgKG~vln~iS~~~Fe~L~~gIptH 174 (416)
++.++++++++ |+++++|+||||+||++++ .++|+||||+||||+++++|||||++||+||+|||++|+++||||
T Consensus 2 ~~~~~~~~~~~----~~~~~~y~GKvKdvY~~~~~~ll~v~~DriSAfD~~~~~IpgKG~vl~~iS~~wF~~l~~~ip~H 77 (313)
T PRK12607 2 MLPRTLTEFNF----PELPNVYRGKVRDNYDLPDGRRVMVATDRISAFDRVLPAIPYKGQVLNQTAAFWFEATKDICPNH 77 (313)
T ss_pred CccccccccCC----CCCchhccccCceEEEcCCCEEEEEEeCCccccCcccCCCCChHHHHHHHHHHHHHHHhccCCcc
Confidence 34567888877 8999999999999999975 899999999999999988999999999999999999999999999
Q ss_pred cccCCCCCeEEEeccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC--CCC
Q 014878 175 VISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED--HDV 252 (416)
Q Consensus 175 fV~~~~~~~~ivkk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~--hD~ 252 (416)
||+.+++++|+|++|+|||||||||||+||| +|++|++|.+++||+.||+|+++|++||+|||||+||+|. ||+
T Consensus 78 ~i~~~~~~~m~vrk~~~iPiEvIvR~y~~GS----~~kry~~g~~~~~gi~lp~gl~eg~~Lp~Pi~tpstK~d~g~hD~ 153 (313)
T PRK12607 78 VLAVPDPNVVVGKRCEPFPVEMVVRGYLAGS----TWRLYKAGKREMYGVTLPDGLRENQKLPEPIITPTTKAEEGGHDE 153 (313)
T ss_pred eecCCCCceeeeeeeeeeeEEEEEEeeecch----hHHHhhccCCcccCccCCccccccCcCCCCeEeeeecCcccCCCC
Confidence 9999999999999999999999999999999 5999999999999999999999999999999999999995 999
Q ss_pred CCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhh
Q 014878 253 PVTPDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEE 332 (416)
Q Consensus 253 ~Is~e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~ 332 (416)
+||+++++++|++|++++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+|||+||||||||++++|++
T Consensus 154 ~Is~~~~~~~~~~~~~~~~~i~~~al~i~~~~~~~~~~~GiiLvD~K~EFG~d~~G~ivL~DEI~TPDssR~W~~~~y~~ 233 (313)
T PRK12607 154 PISPEEILAQGLLTPEDWDELSKYALALFARGQEMAAERGLILVDTKYEFGKDADGRIVLIDEIHTPDSSRYWYADGYEE 233 (313)
T ss_pred CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEeEeeeecCCCcEEEEEeccCCCceeeeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCcHHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHH
Q 014878 333 RFQSGLEPENVDKEFLRLWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAITKSRFDVSSTKEPIHDRISRNVSSAL 412 (416)
Q Consensus 333 ~~~~G~~~~s~DKq~~R~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iTG~~~~~~~~~~~~~~ri~~n~~~~~ 412 (416)
||++|++|++||||+||+||.+.|+. ..+++|+||+|+|++|+++|+++||+|||++|+.+ +..++++||++||++|+
T Consensus 234 ~~~~G~~~~slDKq~~R~wl~~~~~~-~~~~~p~lP~evv~~t~~~Y~~~~e~iTg~~~~~~-~~~~~~~ri~~~l~~~~ 311 (313)
T PRK12607 234 RFAAGEPQEQLDKEFVRQWLIERCGP-YGQEIPEIPDEVIVSVSERYIELYEKITGETFVPD-SGSPPLARIRKNLAAYL 311 (313)
T ss_pred ccccCCCccccCHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHhCCccCcC-CccCHHHHHHHHHHHHh
Confidence 99999999999999999999987642 23467999999999999999999999999999888 78899999999999987
Q ss_pred H
Q 014878 413 S 413 (416)
Q Consensus 413 ~ 413 (416)
.
T Consensus 312 ~ 312 (313)
T PRK12607 312 A 312 (313)
T ss_pred c
Confidence 4
No 3
>PRK13961 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
Probab=100.00 E-value=1.3e-90 Score=682.28 Aligned_cols=277 Identities=41% Similarity=0.679 Sum_probs=260.9
Q ss_pred hcccccccccCCCCCCcccccccceeeecC-CeEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhccCCCCcccc
Q 014878 99 NRLSETNLHLTVPGLKSKTRGKVRDIYDGG-DYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVI 176 (416)
Q Consensus 99 ~~l~~t~l~~~~~~l~~iyeGKvKdVY~~~-d~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~~gIptHfV 176 (416)
.|+.++++ |+|+++|+||||+||+++ +.++|+||||+||||++++ +|||||++||+||+|||++|++|||||||
T Consensus 2 ~~~~~~~~----~~~~~iy~GKvK~vY~~~~~~ll~~~~DriSAfD~~~~~~IpgKG~~l~~iS~~~F~~l~~~IptH~i 77 (296)
T PRK13961 2 STLMESDL----PSLPLLGRGKVRDIYAVDDDRLLMVATDRISAFDVILPEPIPDKGRVLTQMSNFWFDKLAHIVPNHLT 77 (296)
T ss_pred CcccccCC----CCCcccccccCceEEEcCCCEEEEEEeCCccccCcccCCCCCCHHHHHHHHHHHHHHHHhccCCccee
Confidence 35666655 899999999999999985 5899999999999999987 89999999999999999999999999999
Q ss_pred c-------------CCCCCeEEEeccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeee
Q 014878 177 S-------------SPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTP 243 (416)
Q Consensus 177 ~-------------~~~~~~~ivkk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~ep 243 (416)
+ .+++++|+|++|+|||||||||||+||| +|++|++. +++||+.+|+|+++|++||+|||||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~m~vrk~~~iPlEvIvR~y~~GS----~~kry~~~-~~~~g~~lp~gl~eg~~L~~Pi~e~ 152 (296)
T PRK13961 78 GIDVDDVVPADEADQVLGRAVVVKKLKPLPVECVVRGYLTGS----GWKDYQAT-GTVCGIKLPAGLVEASKLPEPIFTP 152 (296)
T ss_pred ccccccccchhhhhccCCceeEEEEccEeeEEEEEecccchh----hHHHhhcc-CcccCccCCCCccccCcCCCCEEee
Confidence 8 6788999999999999999999999999 59999994 9999999999999999999999999
Q ss_pred ccCCCC--CCCCCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCC
Q 014878 244 TTKAED--HDVPVTPDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDS 321 (416)
Q Consensus 244 stK~d~--hD~~Is~e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDS 321 (416)
+||+|. |||+||++++.+ +++++++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+|||+||||
T Consensus 153 ~tK~d~~~hDp~Is~~~~~~--~~~~~e~~~i~~~al~v~~~l~~~~~~~GiiLvD~K~EFG~~~~g~iiL~DEI~TPDs 230 (296)
T PRK13961 153 ATKAELGDHDENISFEEVVE--LVGAELAAQLRDATLAIYKEAADYAATRGIIIADTKFEFGLDEDGTLTLMDEVLTPDS 230 (296)
T ss_pred eecccccCCCCCCCHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeeEEceecCCCcEEEEeeccCCCc
Confidence 999994 999999999986 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccchhhhhcCCCCCCCCcHHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCC
Q 014878 322 SRYWIAHSYEERFQSGLEPENVDKEFLRLWFKDHCNPY-EDEVLPDAPEELICELAWRYIFLYEAITKSRFD 392 (416)
Q Consensus 322 sRlWd~~tye~~~~~G~~~~s~DKq~~R~wl~~~~~~~-~~~~~P~LP~evv~~~s~rY~~~~e~iTG~~~~ 392 (416)
|||||+++|+ .|++|++||||+||+||.+. +| +++++|+||+|++++++++|+++||+|||++|.
T Consensus 231 ~R~Wd~~~~e----~g~~~~~lDKq~~R~~l~~~--~~~~~~~~p~lP~ei~~~~~~~Y~~~~e~itg~~~~ 296 (296)
T PRK13961 231 SRFWPADSYQ----PGTSQPSFDKQFVRDWLETS--GWDKTAPAPPLPADVIEKTRAKYREALERLTGKSLD 296 (296)
T ss_pred ceeccccccc----cCCcccccCHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999998 59999999999999999974 24 466789999999999999999999999999873
No 4
>cd01414 SAICAR_synt_Sc non-metazoan 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. Eukaryotic, bacterial, and archaeal group of SAICAR synthetases represented by the Saccharomyces cerevisiae (Sc) enzyme, mostly absent in metazoans. SAICAR synthetase catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00 E-value=3e-88 Score=661.57 Aligned_cols=263 Identities=48% Similarity=0.771 Sum_probs=250.2
Q ss_pred cccccccceeeecCC-eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhccCCCCcccccC-------------C
Q 014878 115 SKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVISS-------------P 179 (416)
Q Consensus 115 ~iyeGKvKdVY~~~d-~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~~gIptHfV~~-------------~ 179 (416)
++|+||||+||++++ .++|+||||+||||+++. .|||||++||+||+|||++|++|||||||+. +
T Consensus 1 ~~y~GKvK~iY~~~~~~ll~~f~DriSafD~~~~~~IpgKG~~l~~iS~~~F~~l~~gIptH~i~~~~~~~~~~~~~~~~ 80 (279)
T cd01414 1 LIYSGKVRDVYDLGDGRLLFVATDRISAFDVILPPDIPGKGEVLTQISAFWFELTEDIIPNHLISTDVEDLPEIKEPEDP 80 (279)
T ss_pred CcccccceEEEEcCCCEEEEEEeCCccccccccCCCCCCHHHHHHHHHHHHHHHHhccCCccEecccccccccccccccC
Confidence 479999999999986 999999999999999975 8999999999999999999999999999999 9
Q ss_pred CCCeEEEeccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC-CCCCCCHHH
Q 014878 180 DKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDE 258 (416)
Q Consensus 180 ~~~~~ivkk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~-hD~~Is~e~ 258 (416)
+++.|+|++|+|||||||||||+||| +|++|++| +++||+.||+|+++|++|++|||||+||+|. |||+||+++
T Consensus 81 ~~~~~~v~k~~~iPlE~IvR~y~~GS----~~~ry~~~-~~~~g~~lp~g~~eg~~L~~Pi~e~~tK~d~~~D~~Is~~~ 155 (279)
T cd01414 81 DGRSMVVKKAKPIPIECIVRGYLTGS----GWKEYQKG-GTVCGIKLPEGLREAQKLPEPIFTPSTKAEEGHDENISFEE 155 (279)
T ss_pred CCceeEEEeeeEEeEEEEEeeeecch----hHHHhhcc-CccccccCCCCccccCcCCCCEEecccccccCCCCCCCHHH
Confidence 99999999999999999999999999 59999998 5569999999999999999999999999996 999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCC
Q 014878 259 IVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGL 338 (416)
Q Consensus 259 ~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~ 338 (416)
+.++ ++++++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+|||+||||||||++++|+ .|.
T Consensus 156 ~~~~--~~~~~~~~i~~~al~i~~~l~~~~~~~GiiLvD~K~EFG~~~~g~ivL~DEi~TPDs~R~W~~~~~~----~g~ 229 (279)
T cd01414 156 AVEI--IGAELADELRELALALYERAAEYAAKRGLILADTKFEFGLDENGEIILIDEVLTPDSSRFWPADSYE----PGK 229 (279)
T ss_pred HHHh--cCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeeeEeeEcCCCcEEEEEecCCCCcceeeeccccc----cCC
Confidence 9986 9999999999999999999999999999999999999999989999999999999999999999998 499
Q ss_pred CCCCCcHHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhC
Q 014878 339 EPENVDKEFLRLWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAITK 388 (416)
Q Consensus 339 ~~~s~DKq~~R~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iTG 388 (416)
+|++||||+||+||.+++..+.+++||+||+|++++++++|+++||+|||
T Consensus 230 ~~~~lDK~~~R~~l~~~~~~~~~~~~p~LP~~vi~~~~~~Y~~~~~~itg 279 (279)
T cd01414 230 EQPSFDKQFVRDWLEASGWDKQDPPPPPLPAEVIEKTSARYIEAYERITG 279 (279)
T ss_pred CccccChHHHHHHHHhcCCCcccCCCCCCCHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999986422334789999999999999999999999998
No 5
>PRK13960 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
Probab=100.00 E-value=3e-87 Score=671.61 Aligned_cols=300 Identities=31% Similarity=0.487 Sum_probs=272.8
Q ss_pred hcccccccccCCCCCCcccccccceeeecCC-------------------eEEEEEcCCCCccccccC------CCCchh
Q 014878 99 NRLSETNLHLTVPGLKSKTRGKVRDIYDGGD-------------------YLVLVTTDRQSAFDRILA------SIPFKG 153 (416)
Q Consensus 99 ~~l~~t~l~~~~~~l~~iyeGKvKdVY~~~d-------------------~ll~v~kDriSAFD~~~~------~IpgKG 153 (416)
+.+...|-++.+++-+.+|+||||+||.+++ .++|+||||+||||+++. .|||||
T Consensus 5 ~~~~~~~~~~~~~~~~~vy~GKvr~vY~~~~~~~~~l~~~~~~~~~~~~~l~i~v~~DriSAFD~v~~~~~~~~~IpgKG 84 (367)
T PRK13960 5 DKVLAVNDDLPIRTDKPVHSGKVRSVYWLTEEDSRRLIKEKGYNVPADAPLAIMVISDRISAFDCIWHGEGGLNGVPGKG 84 (367)
T ss_pred hheeEecCCCCCCCCCccccceeeEEEecCCCCcchhhhccccccCCCCCEEEEEEeCCcccccccccCccCCCCCCchh
Confidence 3344555556788999999999999999875 458999999999999973 499999
Q ss_pred HHHHHHHHHHHHhcc-CCC-CcccccCCCCCeEEEeccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcc
Q 014878 154 QVLNETSLWWFDQTR-HIT-PNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLV 231 (416)
Q Consensus 154 ~vln~iS~~~Fe~L~-~gI-ptHfV~~~~~~~~ivkk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~ 231 (416)
++||+||+|||++|+ .|| |||||+.+++++|+|+||+|||||||||||+||| +|++|++|.+++||+.||+|++
T Consensus 85 ~vln~iS~~wF~~l~~~GI~pnH~i~~~~~~~mlVrk~~~iPiEvIvR~y~tGS----~~rry~~g~~~~cGi~LpeGl~ 160 (367)
T PRK13960 85 AALNAISNHWFKLFKENGLADSHILDIPHPFVWIVQKARPVMIEAICRQYITGS----MWRAYSKGEREFCGITLPEGLE 160 (367)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceeccCCCceEEEEEeeeeeEEEEEeeeecch----hHHHhcccCccccCcccCcccc
Confidence 999999999999997 677 8999999999999999999999999999999999 5999999999999999999999
Q ss_pred cCCCCCCceeeeccCCC---------CCCCCCC----HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEee
Q 014878 232 KNQKLPANILTPTTKAE---------DHDVPVT----PDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDT 298 (416)
Q Consensus 232 e~~kL~~PI~epstK~d---------~hD~~Is----~e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~ 298 (416)
++++|++|+|||+||++ .||++|| .+++.++|+++.++++.|+++++++|++++++|+++||+||||
T Consensus 161 ~~~~L~epi~tpsTK~~~g~~~~~~e~hD~~Is~~~~~~~i~~~~~~s~~e~~~~~~l~~~v~~~l~~~~~~~GiiLvDt 240 (367)
T PRK13960 161 KDQKLPELLITPSTKGILTGIPGVPEADDVNISRSDIEANYQAFNFSSADDIDLYEKLLKEGFKVISDALAKLDQIFVDT 240 (367)
T ss_pred CCCcCCCceEecccccccccccCccccCCCcCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 99999999999999996 5999999 6666678999999999999999999999999999999999999
Q ss_pred eEEEEee--cCC--cEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHHHHHHHhcC-CC---CCC---------
Q 014878 299 KYEFGKS--SDD--SILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRLWFKDHC-NP---YED--------- 361 (416)
Q Consensus 299 K~EFG~d--~~G--eIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R~wl~~~~-~~---~~~--------- 361 (416)
|||||++ .+| +|+|+|||||||||||||+++|+ .|+.|++ ||||||+||.+++ .+ |..
T Consensus 241 K~EFG~~~d~~g~~~iiL~DEI~TPDSsR~Wd~~~Y~----~G~~~~~-dKe~vR~wl~~~~~~~~~~~~k~~~~er~~~ 315 (367)
T PRK13960 241 KFEFGYVTDAAGNEKLIYMDEVGTPDSSRIWDGAAYR----DGKIVEN-SKEGFRQFLLNHFPDPDILLNKDRMPEREAL 315 (367)
T ss_pred eeECcccccCCCCeeEEEEEecCCCCccccccccccc----CCCCCcc-hHHHHHHHHHhcCCCcccccccccccccccc
Confidence 9999974 345 89999999999999999999998 5999999 9999999999762 22 432
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcCHHHHHHHHHHH
Q 014878 362 EVLPDAPEELICELAWRYIFLYEAITKSRFDVSSTKEPIHDRISRNVSS 410 (416)
Q Consensus 362 ~~~P~LP~evv~~~s~rY~~~~e~iTG~~~~~~~~~~~~~~ri~~n~~~ 410 (416)
+++|+||+|++++|+++|+++||+|||++|..+ ++|.+||.+||+.
T Consensus 316 ~~~p~LP~evv~~~s~~Y~~~~e~iTG~~~~~~---~~p~~~i~~~l~~ 361 (367)
T PRK13960 316 ARDNALPLEAMMDVSRTYTGIAEKITGAKIVLS---ANPKAEIIDILRE 361 (367)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCccCC---CCHHHHHHHHHHh
Confidence 368999999999999999999999999999765 8899999999974
No 6
>TIGR02735 purC_vibrio phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio type. Members of this protein family appear to represent a novel form of phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase), significantly different in sequence and gap pattern from a form (see TIGR00081) shared by a broad range of bacteria and eukaryotes. Members of this family are found within the gammaproteobacteria in the genera Vibrio, Shewanella, and Colwellia, and also (reported as a fragment) in the primitive eukarote Guillardia theta.
Probab=100.00 E-value=3.8e-86 Score=663.25 Aligned_cols=300 Identities=32% Similarity=0.481 Sum_probs=269.8
Q ss_pred cccccccccCCCCCCcccccccceeeecCC-------------------eEEEEEcCCCCccccccC------CCCchhH
Q 014878 100 RLSETNLHLTVPGLKSKTRGKVRDIYDGGD-------------------YLVLVTTDRQSAFDRILA------SIPFKGQ 154 (416)
Q Consensus 100 ~l~~t~l~~~~~~l~~iyeGKvKdVY~~~d-------------------~ll~v~kDriSAFD~~~~------~IpgKG~ 154 (416)
.+...|-++.+++.+.+|+||||+||.+.+ .++|+||||+||||+++. .|||||+
T Consensus 5 ~~~~~~~~~~~~~~~~v~~gkvr~vy~l~~~~~~~~~~~~~~~~~~d~~~~i~v~sDriSAFD~i~~~~g~l~~IpgKG~ 84 (365)
T TIGR02735 5 QVLAVNDDLPIRTDEPVHSGKVRSVYWLTEEDSRRLIEEKGYPVAHDAPLAIMVISDRISAFDCIWHAEGGLNGVPGKGA 84 (365)
T ss_pred ceeEecCCCCCCCCCCcccceeeeeEecCccchhhhhhhccCcCCCCCCEEEEEEeCCcccccccccCcccCCCCCChhH
Confidence 334444455789999999999999999864 689999999999999864 5999999
Q ss_pred HHHHHHHHHHHhcc-CCC-CcccccCCCCCeEEEeccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCccc
Q 014878 155 VLNETSLWWFDQTR-HIT-PNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVK 232 (416)
Q Consensus 155 vln~iS~~~Fe~L~-~gI-ptHfV~~~~~~~~ivkk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e 232 (416)
+||+||+|||++|+ +|| |||||+.+++++|+|+||+|||||||||||+||| +|++|++|.+++||+.||+|+++
T Consensus 85 vln~IS~~wF~~l~~~GI~pnH~i~~~~~~~mlVkk~~~iPiEvIvR~y~tGS----~~rrY~~g~~~~cGi~LpeGl~~ 160 (365)
T TIGR02735 85 ALNAISNHWFKLFAEAGLAESHILDIPHPFVWIVQKAKPVKIEAICRQYITGS----MWRAYAKGERVFCGIDLPEGLAK 160 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCCcceeccCCCCeEEEEEcceeeEEEEEeeeecch----hHHHhcccCCcccCccCCccccC
Confidence 99999999999997 677 9999999999999999999999999999999999 59999999999999999999999
Q ss_pred CCCCCCceeeeccCCC---------CCCCCCCH----HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeee
Q 014878 233 NQKLPANILTPTTKAE---------DHDVPVTP----DEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTK 299 (416)
Q Consensus 233 ~~kL~~PI~epstK~d---------~hD~~Is~----e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K 299 (416)
+++|++|||||+||++ .||++||+ +++.++|+++.+|++.|+++++++|++++++|+++||+|||||
T Consensus 161 ~~~Lpepi~tpstK~~~g~~~g~de~hD~~Is~~~~~~~i~~~~~~~~~ei~~i~~~~~~v~~~l~~~~~~~GiiLvDtK 240 (365)
T TIGR02735 161 DQRLPELLITPSTKGILEGIPGVPAIDDVNITRADIERNWSAFNFEQPEDIDHYERLLREGFAVISDRLSKLGQLFVDTK 240 (365)
T ss_pred CCcCCCCeechhhcccccCccCccccCCCCCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 9999999999999982 39999999 5555579999999999999999999999999999999999999
Q ss_pred EEEEee--cCC--cEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCc---HHHHHHHHHhcCC--CCC-C------CC
Q 014878 300 YEFGKS--SDD--SILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVD---KEFLRLWFKDHCN--PYE-D------EV 363 (416)
Q Consensus 300 ~EFG~d--~~G--eIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~D---Kq~~R~wl~~~~~--~~~-~------~~ 363 (416)
||||++ .+| +|+|+|||||||||||||+++|+ .|+.|++++ ||+||+||.+.+. .|. . ++
T Consensus 241 ~EFG~~~d~~G~~~IiLiDEI~TPDSsR~Wd~~~Y~----~G~~~~~ske~~rQ~lr~~~~~~~~~~~k~~~~~r~~~~~ 316 (365)
T TIGR02735 241 FEFGYVTDVEGTRKLIYMDEVGTPDSSRIWDAGAYA----QGKIVENSKEGFRQALLNWFPDPDILLNKDRMVERAALAR 316 (365)
T ss_pred eECcccccCCCCeeEEEEEecCCCCccccccccccc----CCCCCccccHHHHHHHHHhhhccCccccccccccccccCC
Confidence 999985 358 89999999999999999999998 499998766 8888888865421 121 1 36
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcCHHHHHHHHHHH
Q 014878 364 LPDAPEELICELAWRYIFLYEAITKSRFDVSSTKEPIHDRISRNVSS 410 (416)
Q Consensus 364 ~P~LP~evv~~~s~rY~~~~e~iTG~~~~~~~~~~~~~~ri~~n~~~ 410 (416)
+|+||+|++++|+++|+++||+|||++|..+ ++|.+||.+||..
T Consensus 317 ~p~LP~evv~~~s~~Y~~~~e~iTG~~~~~~---~~~~~~i~~~~~~ 360 (365)
T TIGR02735 317 DNALPQEMLMDVSETYLGIAEKITGSSITLS---ENPKAEIKAILSV 360 (365)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCccCC---CCHHHHHHHHHHH
Confidence 7899999999999999999999999999876 9999999999974
No 7
>PRK13959 phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional
Probab=100.00 E-value=3e-81 Score=624.68 Aligned_cols=273 Identities=27% Similarity=0.342 Sum_probs=251.9
Q ss_pred ccccceeeecCCe-------EEEEEcCCCCccc-cccC-CCCchhHHHHHHHHHHHHhccC-CCCcccccCCC-------
Q 014878 118 RGKVRDIYDGGDY-------LVLVTTDRQSAFD-RILA-SIPFKGQVLNETSLWWFDQTRH-ITPNAVISSPD------- 180 (416)
Q Consensus 118 eGKvKdVY~~~d~-------ll~v~kDriSAFD-~~~~-~IpgKG~vln~iS~~~Fe~L~~-gIptHfV~~~~------- 180 (416)
.||||+||++++. ++|+||||+|||| ++++ .|||||++||+||+|||++|++ |||||||+.++
T Consensus 1 ~GKvkd~Y~~~d~~~~~~~~ll~vfsDriSAFD~~v~~~~IpgKG~~l~~iS~~~Fe~l~~~gI~tH~i~~~~~~~~~~~ 80 (341)
T PRK13959 1 MGSVKDFYVDEEPTETDLGRGRFVFSDRYSVFDWGIMPDEIPDKGASLCTMGAYNFELLEEEGIKTHYIGVVEDGEVVRL 80 (341)
T ss_pred CCCccEEEECCCcccccCCEEEEEEeCCcCCCCccccCCCCCCHhHHHHHHHHHHHHHHHhCCCCcceeccccccccccc
Confidence 4999999999753 9999999999999 8887 8999999999999999999985 99999999877
Q ss_pred ------CCeEEEeccc------------------------eeeeEEEEeeee--ecCCccchhHhhhcCcccc--ccccC
Q 014878 181 ------KNVTIAKKCS------------------------VIPVEFVVRGFV--TGSTDTSLWTVYNKGIRNY--CGNAL 226 (416)
Q Consensus 181 ------~~~~ivkk~~------------------------mIPlEvIVRnya--tGS~~krlw~~Y~~G~~~~--~G~~l 226 (416)
++.|+|++|+ |||||||||||+ +|| +|++|++|..+. ||+.+
T Consensus 81 ~~~~~~~r~mlVkk~~v~~~~~~~~~~~~~~~~~~~~~~~~iPlEvIvR~yl~~~gS----~~~r~~~G~v~~~~~Gi~l 156 (341)
T PRK13959 81 AEASEPPNEMAVKLTQVPDLPFEGGSYDYDAYHEAAGENYLIPLEVIFRNYVPVGSS----LRDRIKEGKIKPEDLGLDA 156 (341)
T ss_pred ccccCCCceEEEEEeeccccccccccccccccccccccCcceeEEEEEeeeecCccc----HHHhhhcCcccccccCcCC
Confidence 8999999998 999999999999 777 588888775544 99999
Q ss_pred CCCcccCCCCCCceeeeccCCCCCCCCCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeec
Q 014878 227 PDGLVKNQKLPANILTPTTKAEDHDVPVTPDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSS 306 (416)
Q Consensus 227 p~Gl~e~~kL~~PI~epstK~d~hD~~Is~e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~ 306 (416)
|+++.+|++||+|||||+||+|.||++||++++.++++++++++++|+++|++||++++++|+++||+|||||||||++.
T Consensus 157 ~~~~~eg~kLp~Pi~e~stK~d~~D~~Is~~~~~~l~g~s~~e~~~i~e~al~i~~~l~~~~~~~GiiLvD~K~EFG~d~ 236 (341)
T PRK13959 157 DEWPEEGVKLPEPIVEFSTKYEEQDRYLSRKEADEIAGLSRAEIEELEELALKVDEIITEEAEKRGLIHEDGKIEFALYE 236 (341)
T ss_pred CCCCcccCcCCCCeEEeeecccccCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeeeECeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHHHHHHHhc-CC------------CCC---CCCCCCCCHH
Q 014878 307 DDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRLWFKDH-CN------------PYE---DEVLPDAPEE 370 (416)
Q Consensus 307 ~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R~wl~~~-~~------------~~~---~~~~P~LP~e 370 (416)
+|+|+|+|||+||||||| .|+ | .+||||+||+||.+. |. .|+ ++++|+||+|
T Consensus 237 ~g~ivL~DEI~TPDssRf----~y~-----~---~~lDKq~~R~~l~~~~w~~~~~~~~~~~~~~w~~~~~~~~P~LP~e 304 (341)
T PRK13959 237 EREIRVVDVVGTFDENRF----SYE-----G---QELSKEVVRQYYRRTEWVEAVKEAKEEDVADWRSLCEPDPPPLPDE 304 (341)
T ss_pred CCCEEEEEECCCCccccc----cCC-----C---CccCHHHHHHHHHhcCcccchhhhhhccccchhhccCCCCCCCCHH
Confidence 999999999999999999 454 3 679999999999964 54 464 4578999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCCcCHHHHHHH
Q 014878 371 LICELAWRYIFLYEAITKSRFDVSSTKEPIHDRISR 406 (416)
Q Consensus 371 vv~~~s~rY~~~~e~iTG~~~~~~~~~~~~~~ri~~ 406 (416)
|+++|+++|+++||+|||++|+.++...++.+||++
T Consensus 305 vv~~ts~~Y~~~~e~iTg~~~~~~~~~~~~~~ri~~ 340 (341)
T PRK13959 305 VVEAVSDLYKAGTNAYTGREWFDAPPLKDAVDRVRE 340 (341)
T ss_pred HHHHHHHHHHHHHHHHHCCccccCCCcccHHHHHhh
Confidence 999999999999999999999877778899999985
No 8
>COG0152 PurC Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [Nucleotide transport and metabolism]
Probab=100.00 E-value=8.2e-74 Score=549.74 Aligned_cols=240 Identities=37% Similarity=0.530 Sum_probs=216.8
Q ss_pred CCcccccccceeeecCC--eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeEEEec
Q 014878 113 LKSKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKK 188 (416)
Q Consensus 113 l~~iyeGKvKdVY~~~d--~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~ivkk 188 (416)
.+++|+||||+||+++| .++|+||||+||||+.+. +|||||++||+||+|||++|+ +||||||++.+++++|+|++
T Consensus 4 ~~~ly~GKaK~vY~~~d~~~li~~f~D~~sAfdg~~~~~i~gKG~~n~~iS~~~F~~L~~~gi~tH~i~~~~~~~~lvkk 83 (247)
T COG0152 4 LRLLYEGKAKDLYETDDPDLLIMEFSDRASAFDGEKKDQIPGKGALNNQISAFIFEKLEEAGIPTHFIELLSDREQLVKK 83 (247)
T ss_pred cccccccccceeeEcCCCCEEEEEEeccceeccccccccCCChhHHHHHHHHHHHHHHHHcCCCcceeeccCCCeEEEEE
Confidence 44899999999999987 489999999999999976 899999999999999999998 69999999999999999999
Q ss_pred cceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCCCCCCCCHHHHHHcCCCCHH
Q 014878 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAEDHDVPVTPDEIVKLGLMTEA 268 (416)
Q Consensus 189 ~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~hD~~Is~e~~~~lglv~~e 268 (416)
++|||||||||||+||| +|++|..+.+++||.+|++++.++++| +||.+|.+++..+|+++++
T Consensus 84 ~~iiPlEvVvRn~~aGS----~~kr~~~~eg~~~~~~l~e~~~k~d~l-------------~dPiv~d~~i~~~~~~~~e 146 (247)
T COG0152 84 LEIIPLEVVVRNYAAGS----LLKRYGIEEGTVLGIPLVEFLYKNDEL-------------PDPIVTDEHISALGIATPE 146 (247)
T ss_pred eeEEeEEEEEeceecch----hHHHhccccceECCCCCccccccchhc-------------CCCccchhhcchhccCCHH
Confidence 99999999999999999 588887765665555555555554444 5666678888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHH
Q 014878 269 EFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFL 348 (416)
Q Consensus 269 e~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~ 348 (416)
++++|+++|++||++++++|+++||+|||||||||+|.+|+|+|+||| +||||||||+++|+ .+||||+|
T Consensus 147 e~~~i~~~alkin~~l~~~~~~~GiilvD~KlEFG~d~~g~iiLaDEi-sPDs~R~Wd~~t~~---------~~~DKd~~ 216 (247)
T COG0152 147 EIEEIKELALKINEVLKDLFAKRGIILVDFKLEFGLDEDGEIVLADEI-SPDSCRLWDAETYE---------KSLDKDFF 216 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeeEEeeEcCCCCEEEEeee-CCCccccccccccc---------cccchHHH
Confidence 999999999999999999999999999999999999999999999999 59999999999996 27999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhC
Q 014878 349 RLWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAITK 388 (416)
Q Consensus 349 R~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iTG 388 (416)
|+++. .+|++|+|+++.++..|.++|++|||
T Consensus 217 R~~~g---------~~~~~y~ev~~r~~~~~~~~~~~itg 247 (247)
T COG0152 217 RRDLG---------DLPELYEEVLERLSDLYEEAYERITG 247 (247)
T ss_pred hhcCC---------CccccHHHHHHHHHHHHHHHHhhccC
Confidence 98432 57899999999999999999999998
No 9
>PRK09362 phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed
Probab=100.00 E-value=5.5e-73 Score=543.35 Aligned_cols=227 Identities=28% Similarity=0.398 Sum_probs=212.2
Q ss_pred CCCcccccccceeeecC--CeEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeEEEe
Q 014878 112 GLKSKTRGKVRDIYDGG--DYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAK 187 (416)
Q Consensus 112 ~l~~iyeGKvKdVY~~~--d~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~ivk 187 (416)
.++++|+||||+||+++ +.++++||||+||||++++ .|||||++||+||++||++|+ .|||||||+.+++++|+|+
T Consensus 3 ~~~~ly~GK~K~vy~~~~~~~ll~~f~D~isafD~~~~~~i~gKG~~~~~is~~~F~~L~~~GI~tH~i~~~~~~~~lv~ 82 (238)
T PRK09362 3 KKELLYEGKAKIVYSTDDPDLLIVEFKDDATAFNGEKKEQIDGKGVLNNQISSFIFKKLEEAGIPTHFIEKLSDREQLVK 82 (238)
T ss_pred cccccccccceEEEEcCCCCEEEEEEeCCceecCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCCceEecccCCCeEEEE
Confidence 37899999999999984 4799999999999999986 899999999999999999997 7899999999999999999
Q ss_pred ccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC-CCCCCCHHHHHHcCCCC
Q 014878 188 KCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMT 266 (416)
Q Consensus 188 k~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~-hD~~Is~e~~~~lglv~ 266 (416)
+|+|||||||||||+|||+ |++| | +++|++|++|||||+||+|. |||+||++++.++|++|
T Consensus 83 k~~~iPiEvIvR~~a~GS~----~~ry--g------------~~eg~~l~~Pive~~~K~d~~~Dp~i~~~~~~~~~~~t 144 (238)
T PRK09362 83 KVEIIPLEVVVRNVAAGSL----VKRL--G------------IEEGTVLPPPIVEFYYKNDALGDPMINEDHILALGWAT 144 (238)
T ss_pred EcceeeEEEEEeeeeceeh----hhhc--C------------CccCCcCCCCeEEEEecCCCCCCCCCCHHHHHHhCCCC
Confidence 9999999999999999995 7777 2 46789999999999999996 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHH
Q 014878 267 EAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKE 346 (416)
Q Consensus 267 ~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq 346 (416)
++++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||++++ +++||||
T Consensus 145 ~~e~~~i~~~al~i~~~l~~~~~~~Gl~LvD~K~EFG~~~~g~ivL~DEi-spDs~R~W~~~~----------~~~lDK~ 213 (238)
T PRK09362 145 PEELAEIKELALKINDVLKGLFAGAGIRLVDFKLEFGRDKDGEIVLADEI-SPDTCRLWDKET----------NEKLDKD 213 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEeeEcCCCCEEEEEee-CCcccccccCCC----------CcccChH
Confidence 99999999999999999999999999999999999999999999999999 999999999876 2699999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 014878 347 FLRLWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAIT 387 (416)
Q Consensus 347 ~~R~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iT 387 (416)
+||+++. .+.+.|.++++|+.
T Consensus 214 ~~R~~~~--------------------~~~~~Y~~v~~rl~ 234 (238)
T PRK09362 214 RFRRDLG--------------------GVIEAYEEVLKRLG 234 (238)
T ss_pred HHhcccc--------------------hHHHHHHHHHHHHh
Confidence 9998753 47889999999985
No 10
>cd01415 SAICAR_synt_PurC bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. A subfamily of SAICAR synthetases represented by the Thermotoga maritima (Tm) enzyme and E. coli PurC. SAICAR synthetase catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00 E-value=1e-72 Score=539.11 Aligned_cols=224 Identities=30% Similarity=0.415 Sum_probs=209.0
Q ss_pred cccccccceeeecCC--eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeEEEeccc
Q 014878 115 SKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKKCS 190 (416)
Q Consensus 115 ~iyeGKvKdVY~~~d--~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~ivkk~~ 190 (416)
++|+||||+||++++ .++|+||||+||||++++ .|||||+++|+||++||++|+ +|||||||+.++++.|+|++|+
T Consensus 1 ~ly~GK~K~vy~~~~~~~l~~~f~D~~tafDg~~~~~i~gKG~~~~~~s~~~F~~L~~~gI~tH~i~~~~~~~~~v~k~~ 80 (230)
T cd01415 1 LLYEGKAKIVYATDDPDVLIVEFKDDATAFNGKKKDTIEGKGVLNNEISALIFKYLEENGIKTHFIEKLSDREQLVKKVE 80 (230)
T ss_pred CcccccceEEEEcCCCCEEEEEEeCCccccCCccCCCCCCHhHHHHHHHHHHHHHHHhCCCCCeeecccCCCEEEEEEcc
Confidence 589999999999874 799999999999999986 899999999999999999998 6999999999999999999999
Q ss_pred eeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC-CCCCCCHHHHHHcCCCCHHH
Q 014878 191 VIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTEAE 269 (416)
Q Consensus 191 mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~-hD~~Is~e~~~~lglv~~ee 269 (416)
|||||||||||+|||+ |++| | +++|++|++|||||+||+|. |||+||++++.++|++|+++
T Consensus 81 miPlEvIvR~~a~GS~----~~ry--~------------~~eg~~l~~Pive~~~K~d~~~Dp~i~~~~~~~~~~~~~~e 142 (230)
T cd01415 81 IIPLEVVVRNIAAGSL----VKRL--G------------IEEGTVLDPPIVEFYYKNDELGDPLINEDHILALGLATEEE 142 (230)
T ss_pred cccEEEEEeccccccc----Hhhc--C------------CCCCCcCCCCEEEEEecCCCCCCCCCCHHHHHHhCCCCHHH
Confidence 9999999999999995 7776 2 45779999999999999996 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHHH
Q 014878 270 FDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLR 349 (416)
Q Consensus 270 ~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R 349 (416)
+++|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||++++ +++||||+||
T Consensus 143 ~~~i~~~~l~v~~~l~~~~~~~gl~LvD~K~EFG~~~~g~ivL~DEi-spDs~R~w~~~~----------~~~lDK~~~R 211 (230)
T cd01415 143 LKEIKELALKINEVLSEFFAEIGIILVDFKLEFGRDKDGEIVLADEI-SPDTCRLWDKET----------GEKLDKDRFR 211 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEEeEEeeEcCCCCEEEEEee-CCCccccccCCC----------CcccCHHHHh
Confidence 99999999999999999999999999999999999989999999999 999999999864 2699999999
Q ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 014878 350 LWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAIT 387 (416)
Q Consensus 350 ~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iT 387 (416)
+|+. .+.+.|.++.+++.
T Consensus 212 ~~~~--------------------~~~~~Y~~v~~r~~ 229 (230)
T cd01415 212 RDLG--------------------DVIEAYEEVLKRLG 229 (230)
T ss_pred cccc--------------------hHHHHHHHHHHHhc
Confidence 8853 47789999998874
No 11
>cd00476 SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. SAICAR synthetase (the PurC gene product) catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00 E-value=4.3e-71 Score=528.01 Aligned_cols=226 Identities=26% Similarity=0.356 Sum_probs=210.5
Q ss_pred cccccccceeeecCC-eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeEEEeccce
Q 014878 115 SKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAKKCSV 191 (416)
Q Consensus 115 ~iyeGKvKdVY~~~d-~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~ivkk~~m 191 (416)
.+|+||||+||++++ .++|+||||+||||++++ .|||||++||+||++||++|+ +|||||||+.+++++|+|++|+|
T Consensus 1 ~ly~GK~K~vy~~~~~~l~~~f~D~isafd~~~~~~i~gKG~~~~~is~~~F~~L~~~gI~tH~i~~~~~~~~~v~k~~m 80 (230)
T cd00476 1 TLYRGKTKIVYETKDGVLLLEFKDDISAGDGARRNFLDEKGDITAKLTLFIFKYLSEAGIPTHFVERLGPRTLLVDKLKX 80 (230)
T ss_pred CCcCccCceEEEcCCCEEEEEEeCcccccCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeeeeecCCCEEEEEecCc
Confidence 479999999999874 899999999999999986 799999999999999999998 59999999999999999999999
Q ss_pred eeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC-CCCCCCHHHHHHcCCCCHHHH
Q 014878 192 IPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLMTEAEF 270 (416)
Q Consensus 192 IPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~-hD~~Is~e~~~~lglv~~ee~ 270 (416)
||||||||||+|||+ |++| +|+.+|++|++|||||+||+|. |||+||+++++++|++|++++
T Consensus 81 iPlEvIvR~~a~GS~----~rry-------------~g~~eg~~l~~Pive~~~K~d~~~Dp~i~~~~~~~~~~~~~~e~ 143 (230)
T cd00476 81 IPLEVVVRNRATGSF----VKRY-------------GGFKEGREFPPPLVEFFYKDDAEHDPIVSEDQLERLGFIGKVDV 143 (230)
T ss_pred ccEEEEEeeeeccch----hhhc-------------CCCCCCCcCCCCEEEeeccCccCCCCCCCHHHHHHhcCCCHHHH
Confidence 999999999999995 7777 2366889999999999999996 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHHHH
Q 014878 271 DEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRL 350 (416)
Q Consensus 271 ~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R~ 350 (416)
++|+++|++||++++++|+++||+|||||||||++.+|+|||+||| +|||||||++++|+ ..+|+
T Consensus 144 ~~i~~~al~v~~~l~~~~~~~gl~LvD~K~EFG~~~~g~ivL~DEi-~pDs~R~w~~~~~~----------~~~~~---- 208 (230)
T cd00476 144 ERXKELAVKINTVLKKLFSPAGLELWDFKLEFGLDEEGEIVLGDEI-SPDSSRLWRKGGEP----------YDKDL---- 208 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEeEEeEecCCCCEEEEEEE-CCCceeeccCcccc----------cCCcc----
Confidence 9999999999999999999999999999999999999999999999 69999999999885 22332
Q ss_pred HHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 014878 351 WFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAIT 387 (416)
Q Consensus 351 wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iT 387 (416)
.+|.+.+.++.++|.++|++|+
T Consensus 209 ---------------~~~~~~~~~~~~~Y~ev~~rl~ 230 (230)
T cd00476 209 ---------------FRRRASLGQIIEKYEEVAELVR 230 (230)
T ss_pred ---------------cCCHHHHHHHHHHHHHHHHHhC
Confidence 5778899999999999999985
No 12
>cd01416 SAICAR_synt_Ade5 Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00 E-value=5.4e-71 Score=532.97 Aligned_cols=234 Identities=24% Similarity=0.319 Sum_probs=212.2
Q ss_pred CCcccccccceeeecC---CeEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeEEEe
Q 014878 113 LKSKTRGKVRDIYDGG---DYLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIAK 187 (416)
Q Consensus 113 l~~iyeGKvKdVY~~~---d~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~ivk 187 (416)
++++|+||||+||+++ +.++++||||+||||+++. .|||||++||+||++||++|+ .|||||||+.+++++|+|+
T Consensus 4 ~~~lyeGK~K~iY~~~~~~~~li~~fkD~~sAfd~~~~~~I~gKG~~~~~is~~~F~~L~~~GI~tHfi~~~~~~~~lvk 83 (252)
T cd01416 4 GKKLIEGKTKIVYELPDQPGLVLIQSKDRITAGDGARKDEIEGKAAISNKTTSNVFELLQEAGIKTHFVKQCSPTAFIAR 83 (252)
T ss_pred cccccccCceEEEecCCCCCEEEEEEeCCCcCCCCcccCCCCCHHHHHHHHHHHHHHHHHhCCCCceeecccCCCeEEEE
Confidence 5689999999999963 4799999999999999986 899999999999999999998 6899999999999999999
Q ss_pred ccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCC-CCCCCCCHHHHHHcCC--
Q 014878 188 KCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAE-DHDVPVTPDEIVKLGL-- 264 (416)
Q Consensus 188 k~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d-~hD~~Is~e~~~~lgl-- 264 (416)
+|+|||||||||||+|||+ |++|. |+++|++|++|||||+||+| .|||+||+++++++|+
T Consensus 84 k~~~iPlEvIvR~~a~GS~----~kry~-------------g~~eg~~l~~PivE~~~K~d~~~Dp~I~~~~~~~~~~~~ 146 (252)
T cd01416 84 KCEMIPIEWVCRRIATGSF----LKRNP-------------GVKEGYRFSPPKLEFFYKDDANHDPQWSEEQLLEAKLNC 146 (252)
T ss_pred EeeeeeEEEEEEeeeecch----HhhcC-------------CCCCcccCCCCeeeEEeeCCCCCCCCCCHHHHHHcCCcc
Confidence 9999999999999999995 77771 35677999999999999999 5999999999999999
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecC-CcEEEEeeecCCCCcceeeccchhhhhcCCCC
Q 014878 265 ----MTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSD-DSILLIDEVHTPDSSRYWIAHSYEERFQSGLE 339 (416)
Q Consensus 265 ----v~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~-GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~ 339 (416)
+|++++++|+++|++||++++++|+++||+|||||||||++.+ |+|+|+||| |||||||||+++++
T Consensus 147 ~~~~~t~~e~~~i~~~al~i~~~l~~~~~~~Gi~LvD~K~EFG~~~~~g~ivL~DEi-sPDs~RlW~~~~~~-------- 217 (252)
T cd01416 147 GGLKIGKKEVDIMTKSTIAIFEILEKAWATQDCTLVDMKIEFGVDVTTGEILLADVI-DNDSWRLWPSGDKR-------- 217 (252)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEeEEeeEeCCCCeEEEEEEE-CCCceeeeECCCCC--------
Confidence 9999999999999999999999999999999999999999987 999999999 99999999997654
Q ss_pred CCCCcHHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 014878 340 PENVDKEFLRLWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAI 386 (416)
Q Consensus 340 ~~s~DKq~~R~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~i 386 (416)
++||||+||+|-.-.. +-.+.+.+.|..+.+.+
T Consensus 218 -~~lDK~~~R~~~~~~~-------------~~~~~v~~~~~~~~~~~ 250 (252)
T cd01416 218 -LMKDKQVYRNLKEVTD-------------EALQEVKKNYEWVADKL 250 (252)
T ss_pred -ccCCcHHHhcCcccch-------------HHHHHHHHHHHHHHHHh
Confidence 6899999999843211 33667788888877654
No 13
>TIGR00081 purC phosphoribosylaminoimidazole-succinocarboxamide synthase. Check length. Longer versions may be multifunctional enzymes.
Probab=100.00 E-value=1.6e-70 Score=525.93 Aligned_cols=229 Identities=30% Similarity=0.476 Sum_probs=210.9
Q ss_pred CCCCcccccccceeeecCC--eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeEEE
Q 014878 111 PGLKSKTRGKVRDIYDGGD--YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVTIA 186 (416)
Q Consensus 111 ~~l~~iyeGKvKdVY~~~d--~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~iv 186 (416)
..++++|+||||+||++++ .++++||||+||||++++ .|||||++||+||+|||++|+ .|||||||+.+++++|+|
T Consensus 4 ~~~~~ly~GK~K~vy~~~~~~~li~~f~D~~tafdg~~~~~i~gKG~~~~~is~~~F~~L~~~GI~tH~i~~~~~~~~lv 83 (237)
T TIGR00081 4 KKRQKLYSGKAKDIYETDDPDLLRFVFRDDISAFDGEKKDQIPGKGRLNTKISAFIFEKLEEAGIPTHYIDLIEDREMLV 83 (237)
T ss_pred ccccccccccceEEEECCCCCEEEEEEeCCccccCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcceecccCCCEEEE
Confidence 3478999999999999864 566999999999999986 799999999999999999998 799999999999999999
Q ss_pred eccceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC-CCCCCCHHHHHHcCCC
Q 014878 187 KKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPDEIVKLGLM 265 (416)
Q Consensus 187 kk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~-hD~~Is~e~~~~lglv 265 (416)
++|+|||||||||||+|||+ |++| ++|+| .+|++|++||++|.|+ |||.|+.+++.++|++
T Consensus 84 ~k~~~iPlEvIvR~~a~GS~----~rr~----------~~~eG----~~~~~pl~E~~~k~d~~~Dp~i~~~~~~~~~~~ 145 (237)
T TIGR00081 84 KKLDIIPLEVIVRNIAAGSL----LKRL----------GIPEG----LELEQPLVEFIFKPDEVGDPMLNESYAEALGLA 145 (237)
T ss_pred EEcceecEEEEEeccccccc----eecc----------CCCCC----CcCCCCccceEEcccccCCCCCCHhHHHHhccC
Confidence 99999999999999999996 5553 25655 6799999999999986 8999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcH
Q 014878 266 TEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDK 345 (416)
Q Consensus 266 ~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DK 345 (416)
|++++++|+++|++||++++++|+++||+|||||||||++.+|+|+|+||| ||||||||++++|+. |
T Consensus 146 ~~~e~~~i~~~a~~v~~~l~~~~~~~gl~LvD~K~EFG~~~~g~ivL~DEI-sPDs~R~w~~~~~~~----g-------- 212 (237)
T TIGR00081 146 TEEELERIKELALKVNEVLKKYFDEKGIILVDFKLEFGLDEEGNLILADEV-SPDTCRLWDKETYEV----G-------- 212 (237)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEeEEeeEcCCCCEEEEEEE-cCcceeecccccCCc----C--------
Confidence 999999999999999999999999999999999999999999999999999 999999999999872 4
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhC
Q 014878 346 EFLRLWFKDHCNPYEDEVLPDAPEELICELAWRYIFLYEAITK 388 (416)
Q Consensus 346 q~~R~wl~~~~~~~~~~~~P~LP~evv~~~s~rY~~~~e~iTG 388 (416)
+|+||.|++.++..+|.++|+++|+
T Consensus 213 ------------------~p~ldkdv~r~~~~~~~eaY~~i~~ 237 (237)
T TIGR00081 213 ------------------APKLDKDIFRRTLGKLIEAYETVAR 237 (237)
T ss_pred ------------------CCCCCHHHHHhhHHHHHHHHHHHhC
Confidence 5678888888889999999999974
No 14
>PF01259 SAICAR_synt: SAICAR synthetase; InterPro: IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase (6.3.2.6 from EC) (SAICAR synthetase) catalyzes the seventh step in the de novo purine biosynthetic pathway; the ATP-dependent conversion of 5'-phosphoribosyl-5-aminoimidazole-4-carboxylic acid and aspartic acid to SAICAR []. In bacteria (purC), fungi (ADE1) and plants (Pur7), SAICAR synthetase is a monofunctional protein; in animals it is the N-terminal domain of a bifunctional enzyme that also catalyse phosphoribosylaminoimidazole carboxylase (AIRC) activity (see IPR000031 from INTERPRO).; GO: 0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity, 0006164 purine nucleotide biosynthetic process; PDB: 2GQS_A 2GQR_B 3KRE_A 3R9R_A 2H31_A 1A48_A 1OBD_A 2CNV_A 1OBG_A 2CNU_A ....
Probab=100.00 E-value=2.1e-72 Score=542.11 Aligned_cols=224 Identities=39% Similarity=0.681 Sum_probs=185.5
Q ss_pred CCcccccccceeeecCC-eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhccCCCCcccccCCCCCeEEEeccc
Q 014878 113 LKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCS 190 (416)
Q Consensus 113 l~~iyeGKvKdVY~~~d-~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~~gIptHfV~~~~~~~~ivkk~~ 190 (416)
+++||+||||+||+++| .++|+||||+||||++++ .|||||+++|+||++||++|++.||||||+.+++++|+|++|+
T Consensus 1 ~~~ly~GK~K~vY~~~d~~l~~~~~D~isafD~~~~~~IpgKG~~~~~is~~~F~~L~~~I~tHfi~~~~~~~~lv~k~~ 80 (248)
T PF01259_consen 1 LKLLYEGKVKDVYETDDDTLLLVFKDRISAFDGVKPDTIPGKGELLNQISAFWFELLEDIIPTHFIERLDPREMLVRKCE 80 (248)
T ss_dssp CEEEEE-SSEEEEEESSTEEEEEE-SEEEETTTTEEEE-TTHHHHHHHHHHHHHHHHHHTSEBSEEEEESSSEEEEE-EE
T ss_pred CCccccCCCeEEEEcCCCEEEEEEccCCccccccccCCCCchhHHHHHHHHHHHHHHhhhCCccccccCCCceEEEEecc
Confidence 46899999999999997 999999999999999987 7999999999999999999984499999999999999999999
Q ss_pred eeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCCC-CCCCCCHH-HHHHcCCCCH-
Q 014878 191 VIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAED-HDVPVTPD-EIVKLGLMTE- 267 (416)
Q Consensus 191 mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d~-hD~~Is~e-~~~~lglv~~- 267 (416)
||||||||||||||| +|++|+.|.. || .+|++|++|+++|+|. +||.++.+ +++.+++++.
T Consensus 81 ~iPlEvIvR~~a~GS----~~~ry~~G~~--~G----------~~l~~p~~e~~~k~d~l~dP~~k~e~~~~~l~~~~~~ 144 (248)
T PF01259_consen 81 MIPLEVIVRNYATGS----FWRRYEPGVE--EG----------IKLPPPLVEFFYKDDPLFDPLTKEEEHDEALGIASAQ 144 (248)
T ss_dssp E-SEEEEEEEEE-HH----HHHHHHHTEE--TT----------EEEEEEEEEEEEEEGGGTS-EE-HHSHHHHTTSSHHH
T ss_pred ccceeEEEeeeecce----eeecccCCcc--cC----------cccCCchhhhcccCCCCCCCcccchhhhhhcchhhhh
Confidence 999999999999999 6999976622 34 4566666666666664 66666677 7777766554
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCC
Q 014878 268 -----AEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPEN 342 (416)
Q Consensus 268 -----ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s 342 (416)
+++++|+++|++||++++++|+++||+|||||+|||++.+|+|+|+|||+||||||||++++|+ .|+.|++
T Consensus 145 ~~i~~~e~~~i~~~a~~i~~~l~~~~~~~Gl~LvD~K~EFG~~~~G~ivL~DEi~TpDs~Rlw~~~~~e----~g~~~~~ 220 (248)
T PF01259_consen 145 EIIGEEELEEIREIALKINEILEEYFAKRGLILVDFKLEFGRDEDGEIVLADEISTPDSSRLWDKETYE----KGENQES 220 (248)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEETTTEEEEES--SSTTTEEEEETTT------BTS----
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEeeeEEEEecCCCcEEEEEEecCCCceeEEEcCCCc----ccccccc
Confidence 9999999999999999999999999999999999999999999999999889999999999998 5999999
Q ss_pred CcHHHHHHHHHhcC
Q 014878 343 VDKEFLRLWFKDHC 356 (416)
Q Consensus 343 ~DKq~~R~wl~~~~ 356 (416)
||||+||+|+.+.+
T Consensus 221 lDK~~~R~~l~~~~ 234 (248)
T PF01259_consen 221 LDKDFFRDWLGDLG 234 (248)
T ss_dssp TSTHHHHTTHSCHH
T ss_pred cccccccccccccc
Confidence 99999999998543
No 15
>KOG2835 consensus Phosphoribosylamidoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2e-35 Score=296.52 Aligned_cols=297 Identities=25% Similarity=0.206 Sum_probs=250.8
Q ss_pred CCCCcccccccceeeecCC---eEEEEEcCCCCccccccC-CCCchhHHHHHHHHHHHHhcc-CCCCcccccCCCCCeE-
Q 014878 111 PGLKSKTRGKVRDIYDGGD---YLVLVTTDRQSAFDRILA-SIPFKGQVLNETSLWWFDQTR-HITPNAVISSPDKNVT- 184 (416)
Q Consensus 111 ~~l~~iyeGKvKdVY~~~d---~ll~v~kDriSAFD~~~~-~IpgKG~vln~iS~~~Fe~L~-~gIptHfV~~~~~~~~- 184 (416)
|-.+.+++||||++|+..+ .++++.+|+|+|||.++. .|++||+++|++|.+||+.|+ .|+++||.+.++.+.+
T Consensus 10 ~~~k~la~gkvr~v~~~~~~~~~vlti~kD~I~a~~~~~a~~I~~ka~il~k~t~~~F~~l~~~gv~~~~~~~~~~t~~~ 89 (373)
T KOG2835|consen 10 PLGKELAEGKVRDVYELVDSPGLVLTISKDRITALDAAMANSIQGKAAILNKITSFVFELLGEAGIETAFTEQCGETAFE 89 (373)
T ss_pred chhhhhheeeeeeecccccCCCeeEEeeccccchhhhhhhcchhhHHHHHHHhhhhhHhhhhhhhhheeeccccchhhhh
Confidence 4468999999999999864 789999999999999976 899999999999999999997 8999999987655433
Q ss_pred --------------------EEeccceeeeEEEEeeeeecCCccchhHhhhcCcccccc-----ccCCCCcccCCCCCCc
Q 014878 185 --------------------IAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCG-----NALPDGLVKNQKLPAN 239 (416)
Q Consensus 185 --------------------ivkk~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G-----~~lp~Gl~e~~kL~~P 239 (416)
.++++..||.|.++|+|.+||+-|..|..|....+++|+ +-.++++..+++++.+
T Consensus 90 ~~p~~~~~~~~v~~~~~ts~f~k~~~~vp~~~~~~~~~~~S~~k~~a~~~n~~g~e~~~~~~~~li~r~~~~~~~~~~~~ 169 (373)
T KOG2835|consen 90 ARPCPMTPIEWVTRRCATSSFEKKNPGVPEGYRFRGYKTESTFKDDANMDNVWGDEQIIDCAGLLIGRDEVKIMQKLPLY 169 (373)
T ss_pred cCCCCCCCceeEEeecchhhHHHhCccCccceeecCccccccccchhhcCcccchhhhhhhhhhhcchhhcccccccccc
Confidence 445556677777778888888766666667666566665 6678899999999999
Q ss_pred eeeeccCCC--CCCCCCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCC-c-EEEEee
Q 014878 240 ILTPTTKAE--DHDVPVTPDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDD-S-ILLIDE 315 (416)
Q Consensus 240 I~epstK~d--~hD~~Is~e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~G-e-IvLiDE 315 (416)
+| +++|+. +||.+|++..+.. .+...+.+.+.+.....|...+-.....|.+++|.|+|||.++.. + ++|+||
T Consensus 170 if-es~k~~~~~h~~~I~d~~ie~--gv~~~~~~~~~a~~v~~~~~~r~~~~~d~~im~D~~~~~d~~~vt~e~~ilv~~ 246 (373)
T KOG2835|consen 170 IF-ESLKAAWAGHNCAISDMKIEF--GVDVTLGEIVLASDVIDNDSWRMWPDGDGRIMKDKKVYFDLDEVTNEGLILVDE 246 (373)
T ss_pred hh-hhhhhhhcCCccccccchhhh--ccchhhhhhhhhhcccchhheEEcccCCcceeeeeeEEeccccCCccceEEEee
Confidence 99 888885 6999999999876 355556666666688899999999999999999999999998654 3 799999
Q ss_pred ecCCCCcc-----------eeeccchhhhhcCCCCCCCCcHHHHHHHHHhcCCCCCC-----------------CCCCCC
Q 014878 316 VHTPDSSR-----------YWIAHSYEERFQSGLEPENVDKEFLRLWFKDHCNPYED-----------------EVLPDA 367 (416)
Q Consensus 316 I~TPDSsR-----------lWd~~tye~~~~~G~~~~s~DKq~~R~wl~~~~~~~~~-----------------~~~P~L 367 (416)
++|||++| ||-+..|+ .|.+|.++||||.|.|+...+....+ -.++..
T Consensus 247 ~~t~~msr~a~~a~~~~~~~~iaga~~----~~~~p~~v~a~f~~~gvp~~~~~~dg~~~~l~~V~~~~~~~~~~v~v~~ 322 (373)
T KOG2835|consen 247 NTTPVMSRYATSAKSRGVVLWIAGAYK----AGHEPLMVDAEFERPGVPVVFVAVDGRDNLLSIVQMPNGVPVATVAVNN 322 (373)
T ss_pred cCchhHhhhhhhcccCceEEEEeccCC----CCCChhhHHhhccccCcceeeeecccccccccceeccCCccccccccCC
Confidence 99999999 99999998 49999999999999999765433321 245678
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHh
Q 014878 368 PEELICELAWRYIFLYEAITKSRFDVSSTKEPIHDRISRNVSSALSA 414 (416)
Q Consensus 368 P~evv~~~s~rY~~~~e~iTG~~~~~~~~~~~~~~ri~~n~~~~~~~ 414 (416)
|++.+..++++|...|+.|||..+..-...+..+.++.++++..+.+
T Consensus 323 p~~aa~~aar~l~~~~~~i~gk~~~~~l~~~~~~~~~~~Kle~~~~~ 369 (373)
T KOG2835|consen 323 PENAALLAARILGLSNEMITGKMRSYQLNQQIIILNKDRKLETVGWE 369 (373)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhcccccHHHHHHhhhHhhccCc
Confidence 99999999999999999999998887778999999999999987643
No 16
>KOG2835 consensus Phosphoribosylamidoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]
Probab=98.72 E-value=9.5e-10 Score=111.93 Aligned_cols=138 Identities=24% Similarity=0.305 Sum_probs=113.2
Q ss_pred cceeeeEEEEeeeeecCCccchhHhhhcCccccccccCCCCcccCCCCCCceeeeccCCC-CCCCCCCHHHHHHc--CCC
Q 014878 189 CSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLVKNQKLPANILTPTTKAE-DHDVPVTPDEIVKL--GLM 265 (416)
Q Consensus 189 ~~mIPlEvIVRnyatGS~~krlw~~Y~~G~~~~~G~~lp~Gl~e~~kL~~PI~epstK~d-~hD~~Is~e~~~~l--glv 265 (416)
|.|+|+|+++|..++|||.+++ +. +|+|+ ++..+..+-+.|++ .+|+.+.++++... -++
T Consensus 93 ~~~~~~~~v~~~~~ts~f~k~~--------~~-----vp~~~----~~~~~~~~S~~k~~a~~~n~~g~e~~~~~~~~li 155 (373)
T KOG2835|consen 93 CPMTPIEWVTRRCATSSFEKKN--------PG-----VPEGY----RFRGYKTESTFKDDANMDNVWGDEQIIDCAGLLI 155 (373)
T ss_pred CCCCCceeEEeecchhhHHHhC--------cc-----Cccce----eecCccccccccchhhcCcccchhhhhhhhhhhc
Confidence 7999999999999999997664 22 45443 34444555556766 48999999998633 257
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeec-CCcEEEE-eeecCCCCcceeeccchhhhhcCCCCCCCC
Q 014878 266 TEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSS-DDSILLI-DEVHTPDSSRYWIAHSYEERFQSGLEPENV 343 (416)
Q Consensus 266 ~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~-~GeIvLi-DEI~TPDSsRlWd~~tye~~~~~G~~~~s~ 343 (416)
+++++..+.+..+-+|+.+++.+..++..|+|.|+|||.+. .++++++ |++ .-|+||.|+..+.. ...
T Consensus 156 ~r~~~~~~~~~~~~ifes~k~~~~~h~~~I~d~~ie~gv~~~~~~~~~a~~v~-~~~~~r~~~~~d~~---------im~ 225 (373)
T KOG2835|consen 156 GRDEVKIMQKLPLYIFESLKAAWAGHNCAISDMKIEFGVDVTLGEIVLASDVI-DNDSWRMWPDGDGR---------IMK 225 (373)
T ss_pred chhhcccccccccchhhhhhhhhcCCccccccchhhhccchhhhhhhhhhccc-chhheEEcccCCcc---------eee
Confidence 89999999999999999999999999999999999999986 6899999 988 99999999987643 788
Q ss_pred cHHHHHHHHH
Q 014878 344 DKEFLRLWFK 353 (416)
Q Consensus 344 DKq~~R~wl~ 353 (416)
||+++++-..
T Consensus 226 D~~~~~d~~~ 235 (373)
T KOG2835|consen 226 DKKVYFDLDE 235 (373)
T ss_pred eeeEEecccc
Confidence 9999887654
No 17
>PF01259 SAICAR_synt: SAICAR synthetase; InterPro: IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase (6.3.2.6 from EC) (SAICAR synthetase) catalyzes the seventh step in the de novo purine biosynthetic pathway; the ATP-dependent conversion of 5'-phosphoribosyl-5-aminoimidazole-4-carboxylic acid and aspartic acid to SAICAR []. In bacteria (purC), fungi (ADE1) and plants (Pur7), SAICAR synthetase is a monofunctional protein; in animals it is the N-terminal domain of a bifunctional enzyme that also catalyse phosphoribosylaminoimidazole carboxylase (AIRC) activity (see IPR000031 from INTERPRO).; GO: 0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity, 0006164 purine nucleotide biosynthetic process; PDB: 2GQS_A 2GQR_B 3KRE_A 3R9R_A 2H31_A 1A48_A 1OBD_A 2CNV_A 1OBG_A 2CNU_A ....
Probab=78.31 E-value=0.068 Score=52.61 Aligned_cols=32 Identities=25% Similarity=0.251 Sum_probs=24.7
Q ss_pred CCcccCCCCCCceeeeccCCCCCCCCCCHHHH
Q 014878 228 DGLVKNQKLPANILTPTTKAEDHDVPVTPDEI 259 (416)
Q Consensus 228 ~Gl~e~~kL~~PI~epstK~d~hD~~Is~e~~ 259 (416)
+++.+++.++.|+++|++|.++||.+++.+..
T Consensus 112 ~p~~e~~~k~d~l~dP~~k~e~~~~~l~~~~~ 143 (248)
T PF01259_consen 112 PPLVEFFYKDDPLFDPLTKEEEHDEALGIASA 143 (248)
T ss_dssp EEEEEEEEEEGGGTS-EE-HHSHHHHTTSSHH
T ss_pred CchhhhcccCCCCCCCcccchhhhhhcchhhh
Confidence 45788889999999999999888888776443
No 18
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=47.98 E-value=35 Score=31.94 Aligned_cols=46 Identities=26% Similarity=0.481 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH---HCCCeEEeeeEE-EEeecCCcEEEEe
Q 014878 268 AEFDEASRKALRLFEYGQRVAS---EHGLILVDTKYE-FGKSSDDSILLID 314 (416)
Q Consensus 268 ee~~~I~~~al~I~~~l~~~~~---~~GliLVD~K~E-FG~d~~GeIvLiD 314 (416)
..+..-.++|+.+.+++..+.. .. +.+.|++.+ ||++.+|++.++|
T Consensus 56 ~~w~~R~~iA~~lL~~l~~l~~~~~~~-~~lcDv~~~nfgv~~~~~lk~iD 105 (188)
T PF12260_consen 56 SPWEQRAKIALQLLELLEELDHGPLGF-FYLCDVSPDNFGVNDDGRLKLID 105 (188)
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCc-EEEeecchHHeEEeCCCcEEEEe
Confidence 3556666889999999998877 44 999999994 9999889999988
No 19
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=42.90 E-value=63 Score=34.99 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=47.2
Q ss_pred cccCCCC-cccCCCCCCceeeeccCCC-----CCCCCCCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEE
Q 014878 223 GNALPDG-LVKNQKLPANILTPTTKAE-----DHDVPVTPDEIVKLGLMTEAEFDEASRKALRLFEYGQRVASEHGLILV 296 (416)
Q Consensus 223 G~~lp~G-l~e~~kL~~PI~epstK~d-----~hD~~Is~e~~~~lglv~~ee~~~I~~~al~I~~~l~~~~~~~GliLV 296 (416)
|++.|++ +.++..| +.+|--|+. -.|.+++.+.+ +++-+.+-.+++.++...+|.++
T Consensus 227 GIP~PePIlLk~hVL---VM~FlGrdgw~aPkLKd~~ls~~ka--------------~~~Y~~~v~~MR~lY~~c~LVHA 289 (520)
T KOG2270|consen 227 GIPCPEPILLKNHVL---VMEFLGRDGWAAPKLKDASLSTSKA--------------RELYQQCVRIMRRLYQKCRLVHA 289 (520)
T ss_pred CCCCCCceeeecceE---eeeeccCCCCcCcccccccCChHHH--------------HHHHHHHHHHHHHHHHHhceecc
Confidence 5666665 2333333 345555543 15666775443 33445555666777778889999
Q ss_pred eeeEEEEee-cCCcEEEEe
Q 014878 297 DTKYEFGKS-SDDSILLID 314 (416)
Q Consensus 297 D~K~EFG~d-~~GeIvLiD 314 (416)
|.- ||-.. -+|.+++||
T Consensus 290 DLS-EfN~LyhdG~lyiID 307 (520)
T KOG2270|consen 290 DLS-EFNLLYHDGKLYIID 307 (520)
T ss_pred chh-hhhheEECCEEEEEE
Confidence 986 88764 489999999
No 20
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=29.58 E-value=1.3e+02 Score=32.23 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHCCCeEEeeeEEEEee-cCCcEEEEee
Q 014878 279 RLFEYGQRVASEHGLILVDTKYEFGKS-SDDSILLIDE 315 (416)
Q Consensus 279 ~I~~~l~~~~~~~GliLVD~K~EFG~d-~~GeIvLiDE 315 (416)
.+-.++.++..+.-|..+|+. ||-.. ..|++.+||.
T Consensus 391 q~~~~M~~lY~Ec~LVHADlS-EyN~Lw~~gKvw~IDV 427 (531)
T KOG2269|consen 391 QVQSIMCRLYKECLLVHADLS-EYNLLWTPGKVWVIDV 427 (531)
T ss_pred HHHHHHHHHHHhhheeecchh-hhhheecCCceEEEec
Confidence 334445555556668888875 77754 3588999993
No 21
>PF13421 Band_7_1: SPFH domain-Band 7 family
Probab=28.76 E-value=1.2e+02 Score=29.22 Aligned_cols=36 Identities=19% Similarity=0.066 Sum_probs=29.9
Q ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHHCCCeEEeeeEE
Q 014878 266 TEAEF-DEASRKALRLFEYGQRVASEHGLILVDTKYE 301 (416)
Q Consensus 266 ~~ee~-~~I~~~al~I~~~l~~~~~~~GliLVD~K~E 301 (416)
+-.++ ..+.+++-.+.+.+...|.+.||.|+|+.+|
T Consensus 155 ~~~~i~a~~~eis~~~~~~l~~~~~~~Gi~l~~f~I~ 191 (211)
T PF13421_consen 155 SILDIPAHLDEISEALKEKLNPEFERYGIELVDFGIE 191 (211)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEEEE
Confidence 33333 4678889999999999999999999999886
No 22
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.11 E-value=1.9e+02 Score=30.23 Aligned_cols=62 Identities=16% Similarity=0.112 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHC---CCe---EEeeeEEEEeecCCcEEEEeeecCCCCcceee
Q 014878 265 MTEAEFDEASRKALRLFEYGQRVASEH---GLI---LVDTKYEFGKSSDDSILLIDEVHTPDSSRYWI 326 (416)
Q Consensus 265 v~~ee~~~I~~~al~I~~~l~~~~~~~---Gli---LVD~K~EFG~d~~GeIvLiDEI~TPDSsRlWd 326 (416)
+|.++++.|+..+-.-++....+|.++ |.| +-|.-++==...+|+++|-|=|-=.|..||-|
T Consensus 177 ~s~~~~d~i~~~t~~f~e~~~~lf~~R~~~g~IRecHGDLhl~ni~l~dg~~~LFDCIEFNd~fr~iD 244 (337)
T COG2187 177 QSKQQIDRIEHMTEEFLERHGPLFDRRIAEGFIRECHGDLHLRNICLWDGEPALFDCIEFNDPFRFID 244 (337)
T ss_pred cCHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCceecccchhhcceeeecCcceEEEEeecCCcchHHH
Confidence 689999999999999999999998864 433 22222211112378999999888888888854
No 23
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=27.80 E-value=77 Score=32.66 Aligned_cols=44 Identities=23% Similarity=0.386 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeeeEEEEe--ecCCcEEEEeeecCCCCcceeeccch
Q 014878 275 RKALRLFEYGQRVASEHGLILVDTKYEFGK--SSDDSILLIDEVHTPDSSRYWIAHSY 330 (416)
Q Consensus 275 ~~al~I~~~l~~~~~~~GliLVD~K~EFG~--d~~GeIvLiDEI~TPDSsRlWd~~ty 330 (416)
++.-.|.+.+..++ +.|+++-|+- ||-+ ++||.+++|| ||.-..
T Consensus 206 ~il~~il~~~~~~~-~~GiVHGDlS-efNIlV~~dg~~~vID----------wPQ~v~ 251 (304)
T COG0478 206 EILDKILEEVRKAY-RRGIVHGDLS-EFNILVTEDGDIVVID----------WPQAVP 251 (304)
T ss_pred HHHHHHHHHHHHHH-HcCccccCCc-hheEEEecCCCEEEEe----------Cccccc
Confidence 34455666666666 9999999996 8876 4688999999 886554
No 24
>PF08491 SE: Squalene epoxidase; InterPro: IPR013698 This domain is found in squalene epoxidase (SE) and related proteins which are found in taxonomically diverse groups of eukaryotes and also in bacteria. SE was first cloned from Saccharomyces cerevisiae (Baker's yeast) where it was named ERG1. It contains a putative FAD binding site and is a key enzyme in the sterol biosynthetic pathway []. Putative transmembrane regions are found to the protein's C terminus. ; GO: 0004506 squalene monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=26.22 E-value=69 Score=32.50 Aligned_cols=69 Identities=23% Similarity=0.386 Sum_probs=45.9
Q ss_pred CCCeEEeeeEEEEeecCCcEEEEe-------eecCCCCcceeeccchhhhhcCCCCCCCCcHHHHHHHHHhcCCCCCCCC
Q 014878 291 HGLILVDTKYEFGKSSDDSILLID-------EVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRLWFKDHCNPYEDEV 363 (416)
Q Consensus 291 ~GliLVD~K~EFG~d~~GeIvLiD-------EI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R~wl~~~~~~~~~~~ 363 (416)
.|++|.|.+++.- ..|.++|+| -| ++..-|.-- ++ +|...++.++.-+++|+++. .
T Consensus 31 vGl~l~~~~lp~~--~~ghvil~~~~pil~YqI-~~~etR~Lv--dv-----p~~k~P~~~~g~l~~yl~~~-------v 93 (276)
T PF08491_consen 31 VGLILKDAPLPKP--NHGHVILGKPGPILLYQI-SSNETRVLV--DV-----PGPKLPSVSNGELKEYLREV-------V 93 (276)
T ss_pred EEEEEcCCCCCCC--CceEEEEcCCCcEEEEEc-CCCceEEEE--Ee-----CCCccCCccchHHHHHHHHH-------H
Confidence 3899999988652 247777766 46 555566542 22 24445677888899999853 3
Q ss_pred CCCCCHHHHHHHH
Q 014878 364 LPDAPEELICELA 376 (416)
Q Consensus 364 ~P~LP~evv~~~s 376 (416)
.|.||+++.+...
T Consensus 94 ~P~LP~~lr~~f~ 106 (276)
T PF08491_consen 94 APQLPEELRPSFE 106 (276)
T ss_pred HhhchHHHHHHHH
Confidence 6888888766544
No 25
>PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6.3.2.4 from EC. D-Alanine is one of the central molecules of the cross-linking step of peptidoglycan assembly. There are three enzymes involved in the D-alanine branch of peptidoglycan biosynthesis: the pyridoxal phosphate-dependent D-alanine racemase (Alr), the ATP-dependent D-alanine: D-alanine ligase (Ddl), and the ATP-dependent D-alanine:D-alanine-adding enzyme (MurF) [].; GO: 0008716 D-alanine-D-alanine ligase activity; PDB: 3Q1K_D 3I12_C 1IOV_A 1IOW_A 2DLN_A 4EG0_B 3LWB_A 1EHI_B 2FB9_A 3V4Z_A ....
Probab=25.00 E-value=1.4e+02 Score=28.23 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEe
Q 014878 265 MTEAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLID 314 (416)
Q Consensus 265 v~~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiD 314 (416)
++++..++|+++|+++|+.|. -+|.--+|+.+ +++|++.+.+
T Consensus 129 l~~~~~~~i~~~a~~a~~~lg----~~~~~RiD~rv----~~~g~~~~lE 170 (203)
T PF07478_consen 129 LSEELQEKIKEIAKKAFKALG----CRGYARIDFRV----DEDGKPYFLE 170 (203)
T ss_dssp S-HHHHHHHHHHHHHHHHHTT----TCSEEEEEEEE----ETTTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHc----CCCceeEEEEe----ccCCceEEEe
Confidence 456777889999999997654 78899999887 5688888887
No 26
>PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp
Probab=24.82 E-value=2.5e+02 Score=27.58 Aligned_cols=53 Identities=21% Similarity=0.226 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCeEEeeeEEEEeecCCcEEEEeeecCCCCc
Q 014878 267 EAEFDEASRKALRLFEYGQRVASEHGLILVDTKYEFGKSSDDSILLIDEVHTPDSS 322 (416)
Q Consensus 267 ~ee~~~I~~~al~I~~~l~~~~~~~GliLVD~K~EFG~d~~GeIvLiDEI~TPDSs 322 (416)
....+.|.++|+.+-..+++.+... +.++=+-||+|.+|+|.|+..=.-|...
T Consensus 184 ~~~~~~l~~~a~~ia~~le~~~~~~---~gElGiDl~iD~~g~iWliEvN~kP~~~ 236 (262)
T PF14398_consen 184 EKIREELEDLALEIAQALEKHFGGH---LGELGIDLGIDKNGKIWLIEVNSKPGKF 236 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc---eeEEEEEEEEcCCCCEEEEEEeCCCCcc
Confidence 3455778888888888888776542 5555556788899999999865444433
No 27
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=24.37 E-value=2.5e+02 Score=28.63 Aligned_cols=57 Identities=25% Similarity=0.256 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHCCCeEEeeeEEEEee-cCCcEEEEeeecCCCCcceeeccchhhhhcCCCCCCCCcHHHHHHHHHh
Q 014878 279 RLFEYGQRVASEHGLILVDTKYEFGKS-SDDSILLIDEVHTPDSSRYWIAHSYEERFQSGLEPENVDKEFLRLWFKD 354 (416)
Q Consensus 279 ~I~~~l~~~~~~~GliLVD~K~EFG~d-~~GeIvLiDEI~TPDSsRlWd~~tye~~~~~G~~~~s~DKq~~R~wl~~ 354 (416)
.+-+-++.++...||.+.|.- ||-+. -+|+.++|| |....-- ..+.-++|||.-..+
T Consensus 174 ~~v~~~~~l~~~a~LVHgDLS-EyNiL~~~~~p~iID----------~~QaV~~--------~hp~a~e~L~RDv~N 231 (268)
T COG1718 174 DVVEYMRRLYKEAGLVHGDLS-EYNILVHDGEPYIID----------VSQAVTI--------DHPNAFEFLERDVRN 231 (268)
T ss_pred HHHHHHHHHHHhcCcccccch-hhheEEECCeEEEEE----------Ccccccc--------CCCchHHHHHHHHHH
Confidence 344455667778999999986 77754 268999999 3222211 145678998866654
No 28
>PRK01736 hypothetical protein; Reviewed
Probab=21.32 E-value=2.5e+02 Score=26.66 Aligned_cols=43 Identities=19% Similarity=0.144 Sum_probs=34.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhCCCCC----CCCCCcCHHHHHHH
Q 014878 364 LPDAPEELICELAWRYIFLYEAITKSRFD----VSSTKEPIHDRISR 406 (416)
Q Consensus 364 ~P~LP~evv~~~s~rY~~~~e~iTG~~~~----~~~~~~~~~~ri~~ 406 (416)
.+++|.++...+.+.|..+...|++..|. .|++.++..+|...
T Consensus 56 ~~~~~~~~~~~l~~ly~~t~~~L~d~~~~f~llLPdd~~~l~~Ra~A 102 (190)
T PRK01736 56 GMAFPHALAQPLRQLHQATSDALTDDGFLFQLLLPEGEDSVFDRADA 102 (190)
T ss_pred cccccHHHHHHHHHHHHHHHHHHcCCCcceeeeCCCCCcchHHHHHH
Confidence 45688899999999999999999987776 67666677777654
Done!